BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 011362
         (487 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/480 (52%), Positives = 331/480 (68%), Gaps = 3/480 (0%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + +V  G  VLG +L+   +P+ VTFTSL+KGLC  SRI EA  L  K+   G  P+V T
Sbjct: 140 LNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVT 199

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC T +T++A+ L EEM NGNG FGV  +PN V Y TIID LCK+G +DK KE
Sbjct: 200 YGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKE 259

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L+MK + I P+VV Y+S+I G C+   W  AK LF EM+D+GV PNVVTFNV++D LC
Sbjct: 260 LFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALC 319

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GKM+EA+ LL LMIQ G  PD FTYNTL+DGFCL GR++ A++LFVSMES G +    
Sbjct: 320 KAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAV 379

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY++LINGYCK+  +  A  LY EM+ K I P V+ +NTL  GLF   +V  A+ LF EM
Sbjct: 380 SYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEM 439

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           + + +  ++ TY   +DGLCKN ++ EA+ELFH L     +  I+ +N LIDGLCK+ ++
Sbjct: 440 KVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKI 499

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           EIA ELF  L    L PNV+TY++MI GLC  GQ++ A+DLFL MEE    PN++TF+ L
Sbjct: 500 EIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTL 559

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI---SLNSLPSFTVHEQ 477
           +RGF + +E  KV+ELL +M E +  PDAS +SIVVDLL+K+E     L+ LP+F    Q
Sbjct: 560 MRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQ 619



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 236/450 (52%), Gaps = 14/450 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIM--EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
            PD     + +K  C    I   EA ++F  L      P + ++ TL+  + +       
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           ++L++ M+       +   P+ +T   +I+  C    VD    +L +M  +   PN VT+
Sbjct: 112 ISLYKRMSL------IGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTF 165

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           TS+++G C     +EA  L  +M+  G +PNVVT+  +++ LC  G    A +L + M+ 
Sbjct: 166 TSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLN 225

Query: 198 HG------VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
                   ++P+   Y T++D  C  G ++  KELF+ M+  G    V +YS +I+G C 
Sbjct: 226 GNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCH 285

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
               EGA  L++EM+ +G+ P+VV  N L   L +  ++E A  L   M + G + DT+T
Sbjct: 286 TGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFT 345

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T IDG C  G I +A +LF ++     E D  +YN LI+G CKSGR+  A +L+R + 
Sbjct: 346 YNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMM 405

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
           C  ++P V+TY+ ++ GL  +G++  A +LF +M+ + + P   T+++L+ G  + N  S
Sbjct: 406 CKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLS 465

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + +EL H ++  +  P   I + ++D L K
Sbjct: 466 EAMELFHYLENHDFQPSIQIFNCLIDGLCK 495


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/484 (47%), Positives = 330/484 (68%), Gaps = 6/484 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+  GF     IL+  ++P+ VT+ +LIKGLC E RI EA  LF +++  GC PDV TY 
Sbjct: 119 RLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYG 178

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+ GLC T +  +AL L +EM N    + + C+PN +TY  I+DGLCK G  D+AK+L 
Sbjct: 179 TLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +MK + + P++++Y S+I GFC A  W E+KRL  EM+DQG+QP++VTFNV++D LCK 
Sbjct: 239 EEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKE 298

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +LL +MI+ G+ PD  TYN+L++GFC+ G +N A+ELFVSM S GC+  V SY
Sbjct: 299 GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 358

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++LINGY K  ++E A+ LY+EML  G +P+V+ +++L  G+F   +V+ A KLF  M+ 
Sbjct: 359 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 418

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G+A +++TY  F+DGLCKN  + EA++LF  L+    + +I   N LIDGLCK+G+LE 
Sbjct: 419 HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLET 478

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A ELF  L      PNVVTY+IMI G C +GQ+DKA  L   ME N   P++IT++ L+R
Sbjct: 479 AWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMR 538

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI---SLNSLPSFTVHEQQE 479
           GF   N+  +V++LLH+M + +V PDA   SIVVD+L+K+E     L+ LP F +   Q+
Sbjct: 539 GFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPI---QK 595

Query: 480 EVDE 483
            VD+
Sbjct: 596 GVDK 599



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 197/397 (49%), Gaps = 12/397 (3%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+  ++  ++ GL K     +   L  QM+   +  +  T   ++   C      E    
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F  ++ +G  PN+VT+N ++  LC   ++ EA+RL   M + G  PD  TY TL+ G C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 217 TGRVNHAKELF------VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           TG +N A +L       +S   + CK  V +Y+I+++G CK    + A  L+ EM ++G+
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P ++ +N+L  G     + E + +L DEM   G+  D  T+   ID LCK G ++EA +
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +       D+  YNSLI+G C  G L  A ELF S+P     P+V++Y+++I G  
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 366

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
              ++++A  L+ +M      PNVIT+D L++G     +     +L   MK   +  ++ 
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 426

Query: 451 IVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNVK 487
              I +D L KN+    ++  FT      E+  SN K
Sbjct: 427 TYGIFLDGLCKNDCLFEAMKLFT------ELKSSNFK 457



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 147/316 (46%), Gaps = 6/316 (1%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
            A   F  MM     P++ +FN ++  L K     +   L + M   G+  D  T N LL
Sbjct: 52  HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           +  C   R+      F  +   G    + +Y+ LI G C    I  A  L+  M   G  
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCT 171

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN------GVAADTWTYRTFIDGLCKNGYI 325
           PDVV + TL  GL     +  A KL  EM  +          +  TY   +DGLCK G  
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA +LF  ++       I +YNSLI G C +G+ E +  L   +    L P++VT++++
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I  LC +G++ +A+ L   M E+ +VP+++T++ LI GF  + + +   EL   M     
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351

Query: 446 MPDASIVSIVVDLLAK 461
            PD    +++++  +K
Sbjct: 352 EPDVISYNVLINGYSK 367



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 132/255 (51%), Gaps = 8/255 (3%)

Query: 215 CLTGRVN--HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           C TG V   HA   F  M       ++ S++ L++G  K K      SLY++M   G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D    N L   L  ++++   F  F  + R G + +  TY T I GLC    I EA  LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV------LVPNVVTYSIMI 386
             ++ L C  D+  Y +LI GLC +G + IAL+L + +   +        PNV+TY+I++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC  G+ D+A+ LF +M+   ++P++I+++ LI GF    +  +   LL +M +  + 
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 447 PDASIVSIVVDLLAK 461
           PD    ++++D L K
Sbjct: 283 PDMVTFNVLIDTLCK 297



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 140/277 (50%), Gaps = 8/277 (2%)

Query: 180 CKNGKMD--EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
           CK G +    A     LM++    P   ++N LL G       +    L+  M   G   
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              + +IL+N  C    +    + ++ +L +G  P++V +NTL  GL   H++  A +LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL------RILKCEFDIRAYNSLI 351
             MQ+ G   D  TY T I GLC  G I  A++L   +        + C+ ++  YN ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DGLCK GR + A +LF  +    ++P++++Y+ +I G C  G+ ++++ L  +M +  + 
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           P+++TF++LI    +  +  +  +LL  M E  ++PD
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD 319


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/478 (47%), Positives = 325/478 (67%), Gaps = 3/478 (0%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS     +  IL+  + P+ VT+T+LIKGLC E RI EA  LF +++  GC P+  TY 
Sbjct: 141 RVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYG 200

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+ GLC+T +  +AL L +EM N   ++GV C+P  +TY+ IIDGLCK G  D+AKEL 
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELF 260

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +MK + + P+V++Y+++I GFC A  W+++K LF EM+DQGVQP++VTF+V++D LCK 
Sbjct: 261 EEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKE 320

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +LL++MIQ G+ P+  TYN+L+DGFC+ G +N A+ELF+SM S G +    SY
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISY 380

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LINGYCK  +++ A++LY+EML  G  P+V  + TL  GLF+  +V  A KLF  M+ 
Sbjct: 381 TTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKT 440

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV+A++  Y  F+DGLCKN  + EA+ELF+ L+    + +I  Y+ LIDGLCK+G+LE 
Sbjct: 441 YGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLET 500

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A ELF  L    L P+VVTY+IMI G C  GQ+D A  LF  MEEN   P++I ++ L+ 
Sbjct: 501 AWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLC 560

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS---LNSLPSFTVHEQ 477
           GF   N+  +VI+LLHKM + +V P+A+  +IVVD+L K+E     ++ LP F V   
Sbjct: 561 GFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQRH 618



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 191/373 (51%), Gaps = 6/373 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P   ++  ++ GL K     +   L  +M+   + P++ T + +    C     +EA   
Sbjct: 89  PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              ++ +G  PNVVT+  ++  LC   ++ EA+RL   M + G  P+A TY TL+ G C 
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208

Query: 217 TGRVNHAKELF------VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           TG VN A +L        S   + CK  V +YSI+I+G CK    + A  L+ EM ++G+
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            PDV+ ++TL  G     + +++  LFDEM   GV  D  T+   ID LCK G + EA +
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +       ++  YNSLIDG C  G L  A ELF S+P   L P+ ++Y+ +I G C
Sbjct: 329 LLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYC 388

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
              ++ +A +L+ +M +    PNV T+  L++G  +  +     +L   MK   V  ++ 
Sbjct: 389 KTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQ 448

Query: 451 IVSIVVDLLAKNE 463
           I  I +D L KN+
Sbjct: 449 IYGIFLDGLCKND 461



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 152/289 (52%), Gaps = 14/289 (4%)

Query: 180 CKNGKMD--EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV---SMESMG 234
           CK G +   +A    DLM++    P   ++N LL G     ++NH  +LF     M   G
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGL---AKINHYSQLFSLYNEMRLAG 121

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
               +F+ SIL N  C    +  AL+  + +L +G  P+VV + TL  GL   H++  A 
Sbjct: 122 LSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEAT 181

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL------RILKCEFDIRAYN 348
           +LF  MQ+ G   +  TY T I GLC+ G +  A++L   +        + C+  +  Y+
Sbjct: 182 RLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYS 241

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            +IDGLCK GR + A ELF  +    ++P+V++YS +I G C  G+ D+++ LF +M + 
Sbjct: 242 IIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ 301

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            V P+++TF +LI    +  + ++  +LL  M +  ++P+    + ++D
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLID 350



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 145/303 (47%), Gaps = 6/303 (1%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A   F  MM     P + +FN ++  L K     +   L + M   G+ PD FT + L 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           +  C   RV+ A      +   G    V +Y+ LI G C    I  A  L+  M   G  
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEM----QRNGV--AADTWTYRTFIDGLCKNGYI 325
           P+ V + TL  GL +   V  A KL  EM     + GV       TY   IDGLCK G  
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA ELF  ++      D+ +Y++LI G C +G+ + +  LF  +    + P++VT+S++
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I  LC +G++ +A+ L   M +  +VPN+IT++ LI GF  + + +   EL   M    +
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373

Query: 446 MPD 448
            PD
Sbjct: 374 EPD 376


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/480 (48%), Positives = 320/480 (66%), Gaps = 16/480 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV  GFVV G IL+  + P+  TFT+L+KGLC E +I EA  +F  + VF C P   T  
Sbjct: 157 RVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCG 216

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++GLCRT +T  AL L E M NGN +FG+ C+P  V+Y+ IID LCK+G V++AKE  
Sbjct: 217 VLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFF 276

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           ++MK+K I PNVVTYTS++ G C A +W EAKRLFIEM+D G+ P+VVTF+V++  LCK 
Sbjct: 277 VEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKV 336

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EAS L DLM+Q  V P   TYN L++G+CL G V+  K++F+SM +  C+H   SY
Sbjct: 337 GKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSY 396

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           SIL+  YCK+ E+ GA+ LY EM+ +GI+P V+ ++          +V  A KLF E+Q 
Sbjct: 397 SILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYS----------KVGDARKLFGEIQF 446

Query: 303 NGVAADTWT---YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
             +  D+ +   Y  ++DGLCKNG + EA+++F+ L   K   ++  +NSLI+G+C+S +
Sbjct: 447 QDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEK 506

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LEIA ELF  L    L P+VVTY+IMI GLC  GQ  KA DLFL+MEE    PNV+TF+ 
Sbjct: 507 LEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNT 566

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI---SLNSLPSFTVHE 476
           L+RG    +E  K++ELLHKM    + PDAS + IV+D+L K+E     LN LP+F V E
Sbjct: 567 LMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNLLPTFPVQE 626



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 155/352 (44%), Gaps = 43/352 (12%)

Query: 110 CKEG--FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
           CK G   + +A     QM      P +  + ++       K +     +   M   G+  
Sbjct: 81  CKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLK 140

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N ++ N++++ LC   ++ E   +  ++++ G RP+  T+  L+ G CL G++  A  +F
Sbjct: 141 NFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVF 200

Query: 228 VSM--------------------------------ESM---------GCKHTVFSYSILI 246
             M                                E+M          CK TV SYS +I
Sbjct: 201 KIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCII 260

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +  CK+  +E A   + EM  KGI P+VV + +L  GL    + E A +LF EM  +G+ 
Sbjct: 261 DSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLL 320

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D  T+   I  LCK G + EA  LF  +     E   R YN LI+G C +G ++   ++
Sbjct: 321 PDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKI 380

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           F S+       +  +YSI++   C D ++  A  L+ +M +  + P VIT+ 
Sbjct: 381 FLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYS 432



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 34/260 (13%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +   +++    P   T+  LI+G C    + E   +F  +    C+ D  +
Sbjct: 336 VGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGS 395

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI--------------- 105
           Y+ L+   C+ S    A+ L+ EM +     G+  +P  +TY+ +               
Sbjct: 396 YSILMKAYCKDSEVHGAMILYREMMDR----GI--QPTVITYSKVGDARKLFGEIQFQDM 449

Query: 106 -------------IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                        +DGLCK G V +A ++   +++     NV  + S+I G C ++    
Sbjct: 450 VLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEI 509

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  LF  + ++ +QP+VVT+ +++  LCK G+  +A  L   M + G  P+  T+NTL+ 
Sbjct: 510 AWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMR 569

Query: 213 GFCLTGRVNHAKELFVSMES 232
           G CL        EL   M +
Sbjct: 570 GLCLNSERPKIVELLHKMAA 589


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 223/450 (49%), Positives = 304/450 (67%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV  G  V+  IL+  + PD VT+T+LIKGLC E RI +AA LFT+++  GC P+  TY 
Sbjct: 146 RVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYG 205

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+ GLCRT +  +AL L +EM N +  +G+  +P  ++Y+ IID LCK+   D+A++L 
Sbjct: 206 TLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLF 265

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +MK + + P V++YTS+I GFC    W EAKRLF EM++QGVQPNVVTFNV++D LCK 
Sbjct: 266 EEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKE 325

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA  LL++MIQ G+ P+  TYN+L++GFCL G +N A+ELFVSM S GC+  V  Y
Sbjct: 326 GKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICY 385

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++LINGYCK  ++E A+ LY+ ML  G +PDV  +  L  GLF+  +V  A KLF  M+ 
Sbjct: 386 TVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV 445

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  D + Y  F++GLCKNG + EA+ELF+ L+    + DI  +N LIDGLCK+G+LE 
Sbjct: 446 YGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLET 505

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A ELF  LP   L P+VVTY+IMI   C  GQ+ KA  LF  ME+N   P+ IT+  LIR
Sbjct: 506 AWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIR 565

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIV 452
           GF    +  KV+ELLH M + +V  D +I+
Sbjct: 566 GFFESKKLEKVVELLHMMVQRDVSLDVNIL 595



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 222/464 (47%), Gaps = 47/464 (10%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
            +  F     ++ S  TP   +FT L+ GL       +   L+ ++R+ G  PD  T   
Sbjct: 77  ATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+N LC  +              G G               ++ G+ + G++        
Sbjct: 137 LLNCLCNVNRV------------GEG-------------LAVMAGILRRGYI-------- 163

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
                   P++VTYT++I+G C     ++A  LF  M   G  PN +T+  +M  LC+ G
Sbjct: 164 --------PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG 215

Query: 184 KMDEASRLLDLMIQ----HGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            +  A +L   M+     +G+  +P   +Y+ ++D  C   R + A++LF  M+  G   
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTP 275

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           TV SY+ LI+G+C   + E A  L++EM+++G++P+VV  N L   L +  +V  A  L 
Sbjct: 276 TVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL 335

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           + M + G+  +  TY + I+G C  G +  A ELF ++    CE D+  Y  LI+G CK+
Sbjct: 336 EVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKT 395

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
            ++E A++L+  +      P+V TY  ++ GL   G++  A+ LF  M+   +  ++  +
Sbjct: 396 SKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIY 455

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            + + G  +     + +EL +K+K  N+  D    + ++D L K
Sbjct: 456 GIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 499



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 184/372 (49%), Gaps = 6/372 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P   ++T ++ GL K     +   L  QM+   I P+  T   ++   C      E   +
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              ++ +G  P++VT+  ++  LC   ++ +A+ L   M + G  P+A TY TL+ G C 
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 217 TGRVNHAKELF------VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           TG ++ A +L        S+  +  K  V SYSI+I+  CK++  + A  L+ EM  +G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P V+ + +L  G     + E A +LF+EM   GV  +  T+   ID LCK G ++EA +
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 333

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +       ++  YNSLI+G C  G L  A ELF S+P     P+V+ Y+++I G C
Sbjct: 334 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 393

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
              ++++A  L+  M +    P+V T+  L+ G  +  +     +L   MK   +  D  
Sbjct: 394 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 453

Query: 451 IVSIVVDLLAKN 462
           I  I ++ L KN
Sbjct: 454 IYGIFLNGLCKN 465



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 180/347 (51%), Gaps = 8/347 (2%)

Query: 110 CKEGFVD--KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
           CK G +   +A +    M   N  P + ++T ++ G    K +++   L+ +M   G+ P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           +  T N++++ LC   ++ E   ++  +++ G  PD  TY TL+ G C+  R++ A  LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG------IKPDVVIHNTLF 281
             M+ +GC     +Y  L+ G C+   I  AL L+ EML+         KP V+ ++ + 
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L +  + + A  LF+EM+  G+     +Y + I G C  G   EA  LF+ +     +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  +N LID LCK G++  A +L   +    +VPN++TY+ +I G C  G ++ AR+L
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           F+ M      P+VI + +LI G+ + ++  + ++L + M ++   PD
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPD 416


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/450 (48%), Positives = 301/450 (66%), Gaps = 8/450 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV  G  V+  IL+  + PD VT+T+LIKGLC E RI +AA LFT+++  GC P+  TY 
Sbjct: 146 RVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYG 205

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+ GLCRT +  +AL L +EM N +  +G+  +P  ++Y+ IID LCK+   D+A++L 
Sbjct: 206 TLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLF 265

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +MK + + P V++YTS++        W EAKRLF EM++QGVQPNVVTFNV++D LCK 
Sbjct: 266 EEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKE 317

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA  LL++MIQ G+ P+  TYN+L++GFCL G +N A+ELFVSM S GC+  V  Y
Sbjct: 318 GKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICY 377

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++LINGYCK  ++E A+ LY+ ML  G +PDV  +  L  GLF+  +V  A KLF  M+ 
Sbjct: 378 TVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV 437

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  D + Y  F++GLCKNG + EA+ELF+ L+    + DI  +N LIDGLCK+G+LE 
Sbjct: 438 YGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLET 497

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A ELF  LP   L P+VVTY+IMI   C  GQ+ KA  LF  ME+N   P+ IT+  LIR
Sbjct: 498 AWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIR 557

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIV 452
           GF    +  KV+ELLH M + +V  D +I+
Sbjct: 558 GFFESKKLEKVVELLHMMVQRDVSLDVNIL 587



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 221/443 (49%), Gaps = 20/443 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP   +FT L+ GL       +   L+ ++R+ G  PD  T   L+N LC  +     L 
Sbjct: 93  TPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLA 152

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +      G    G +  P+ VTYTT+I GLC E  + KA  L  +M+     PN +TY +
Sbjct: 153 VMA----GILRRGYI--PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGT 206

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQG------VQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           +++G C   + + A +L  EM++         +P V+++++I+D LCK+ + DEA  L +
Sbjct: 207 LMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFE 266

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G+ P   +Y +L+           AK LF  M + G +  V ++++LI+  CK  
Sbjct: 267 EMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEG 318

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           ++  A  L   M+ +GI P+++ +N+L  G   +  +  A +LF  M   G   D   Y 
Sbjct: 319 KVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYT 378

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I+G CK   + EA++L++ +  +    D++ Y +L+ GL + G++  A +LF  +   
Sbjct: 379 VLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVY 438

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            +  ++  Y I + GLC +G + +A +LF  ++   +  ++  F+ LI G  +  +    
Sbjct: 439 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 498

Query: 434 IELLHKMKEINVMPDASIVSIVV 456
            EL  K+ +  + PD    +I++
Sbjct: 499 WELFEKLPQEELQPDVVTYNIMI 521



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 183/388 (47%), Gaps = 35/388 (9%)

Query: 110 CKEGFVD--KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
           CK G +   +A +    M   N  P + ++T ++ G    K +++   L+ +M   G+ P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           +  T N++++ LC   ++ E   ++  +++ G  PD  TY TL+ G C+  R++ A  LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG------IKPDVVIHNTLF 281
             M+ +GC     +Y  L+ G C+   I  AL L+ EML+         KP V+ ++ + 
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 282 VG------------LFEIHQV---------------ERAFKLFDEMQRNGVAADTWTYRT 314
                         LFE  +V               E A +LF+EM   GV  +  T+  
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNV 309

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            ID LCK G ++EA +L   +       ++  YNSLI+G C  G L  A ELF S+P   
Sbjct: 310 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             P+V+ Y+++I G C   ++++A  L+  M +    P+V T+  L+ G  +  +     
Sbjct: 370 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 429

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +L   MK   +  D  I  I ++ L KN
Sbjct: 430 KLFGVMKVYGIPGDLYIYGIFLNGLCKN 457


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/484 (45%), Positives = 313/484 (64%), Gaps = 31/484 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+  GF     IL+  ++P+ VT+ +LIKGLC E RI EA  LF +++  GC PDV TY 
Sbjct: 119 RLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYG 178

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+ GLC T +  +AL L +EM N    + + C+PN +TY  I+DGLCK G  D+AK+L 
Sbjct: 179 TLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +MK + + PN                         EM+DQG+QP++VTFNV++D LCK 
Sbjct: 239 EEMKTQGMIPN-------------------------EMLDQGLQPDMVTFNVLIDTLCKE 273

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +LL +MI+ G+ PD  TYN+L++GFC+ G +N A+ELFVSM S GC+  V SY
Sbjct: 274 GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 333

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++LINGY K  ++E A+ LY+EML  G +P+V+ +++L  G+F   +V+ A KLF  M+ 
Sbjct: 334 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 393

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G+A +++TY  F+DGLCKN  + EA++LF  L+    + +I   N LIDGLCK+G+LE 
Sbjct: 394 HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLET 453

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A ELF  L      PNVVTY+IMI G C +GQ+DKA  L   ME N   P++IT++ L+R
Sbjct: 454 AWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMR 513

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI---SLNSLPSFTVHEQQE 479
           GF   N+  +V++LLH+M + +V PDA   SIVVD+L+K+E     L+ LP F +   Q+
Sbjct: 514 GFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPI---QK 570

Query: 480 EVDE 483
            VD+
Sbjct: 571 GVDK 574



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 193/396 (48%), Gaps = 24/396 (6%)

Query: 110 CKEGFVDKAKELLL--QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
           CK G V     L     M      P++ ++  ++ G    K +++   L+ +M   G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           +  T N++++ LC   ++ E       +++ G  P+  TYNTL+ G C+  R++ A  LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK------GIKPDVVIHNTLF 281
           + M+ +GC   V +Y  LI G C    I  AL L+ EML+         KP+V+ +N + 
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 282 VGLFEIHQVERAFKLFDEMQR----------NGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
            GL ++ + + A +LF+EM+            G+  D  T+   ID LCK G ++EA +L
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
              +       D+  YNSLI+G C  G L  A ELF S+P     P+V++Y+++I G   
Sbjct: 283 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 342

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
             ++++A  L+ +M      PNVIT+D L++G     +     +L   MK   +  ++  
Sbjct: 343 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYT 402

Query: 452 VSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNVK 487
             I +D L KN+    ++  FT      E+  SN K
Sbjct: 403 YGIFLDGLCKNDCLFEAMKLFT------ELKSSNFK 432



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 192/381 (50%), Gaps = 16/381 (4%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+  ++  ++ GL K     +   L  QM+   +  +  T   ++   C      E    
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F  ++ +G  PN+VT+N ++  LC   ++ EA+RL   M + G  PD  TY TL+ G C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 217 TGRVNHAKELF------VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY-------- 262
           TG +N A +L       +S   + CK  V +Y+I+++G CK    + A  L+        
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 263 --SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
             +EML +G++PD+V  N L   L +  +V  A KL   M  +G+  D  TY + I+G C
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G +  A ELF ++    CE D+ +YN LI+G  K+ ++E A++L+  +      PNV+
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY  ++ G+   G++D A+ LF  M+ + +  N  T+ + + G  + +   + ++L  ++
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426

Query: 441 KEINVMPDASIVSIVVDLLAK 461
           K  N   +   ++ ++D L K
Sbjct: 427 KSSNFKLEIENLNCLIDGLCK 447


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/449 (45%), Positives = 277/449 (61%), Gaps = 12/449 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T   LI  LC  +RI E  A    +   G  PDV T+TTL+ GLC     I A  L
Sbjct: 124 PDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKL 183

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK------NIKPNV 134
           F  M        + C PN VTY T+I GLC  G ++ A +   +M +       N +PNV
Sbjct: 184 FMRMQK------LGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNV 237

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           ++Y+ +I G C   +W EA  LF EM+DQGVQPNVVTF+V++D LCK G++ +A +LL++
Sbjct: 238 ISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEM 297

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           MIQ G+ P+ FTY +L+ GFCL G +N AKELFVSM S G +  V SY++LINGYCK  +
Sbjct: 298 MIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLK 357

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +E A+ L++EML  G+ PDV     L   LF   +V+ A +LF  ++   +  D      
Sbjct: 358 VEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCI 417

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
           F+DGLCKNGYI EA++LF+ L     + DI  +  LIDGLCK+G+LE A ELF  L    
Sbjct: 418 FLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + P+ + YS MI G C  GQ+DKA  LF  MEEN   P++IT+ +L+RGF   N+  KV+
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +LLH+M E +V PD  I +IV D++ K+E
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIVEDMVCKDE 566



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 147/435 (33%), Positives = 229/435 (52%), Gaps = 35/435 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++ G   +  I++  + PD VTFT+LIKGLC E RI+EA  LF +++  GC P+V TY 
Sbjct: 141 RINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYG 200

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG-------------- 108
           TL+ GLC   +  +AL   +EM N    +   C PN ++Y+ IIDG              
Sbjct: 201 TLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLF 260

Query: 109 ---------------------LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                                LCKEG V KAK+LL  M    I PN+ TYTS+I+GFC  
Sbjct: 261 NEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLV 320

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
            D N AK LF+ M  +G +P+V+++N++++  CK  K++EA +L + M+  G+ PD  T 
Sbjct: 321 GDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTS 380

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             LL    L G+V+ AKELF  ++       +    I ++G CKN  I  A+ L++E+ S
Sbjct: 381 GVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELES 440

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
             +K D+     L  GL +  ++E A++LF+++   G+  D   Y + I G CK G + +
Sbjct: 441 YNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDK 500

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  LF  +    C  D+  Y+ L+ G  +S +LE  ++L   +    + P+   Y+I+  
Sbjct: 501 ANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVED 560

Query: 388 GLCNDGQMDKARDLF 402
            +C D +  +  DL 
Sbjct: 561 MVCKDEKYKEWLDLL 575



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 209/428 (48%), Gaps = 24/428 (5%)

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL---CKEGF--VDKAKELL-LQM 125
           +H+   L+   ++++ N    +   P  +++   I      CK G   V +A +   L M
Sbjct: 29  THSPAVLSSNPQISSANNPKSLHASPERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMM 88

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           +      ++ ++  ++ G    + +++   L+ +M   G+ P+++T N++++ LC   ++
Sbjct: 89  R------SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRI 142

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           +E    +  +++ G  PD  T+ TL+ G C+  R+  A +LF+ M+ +GC   V +Y  L
Sbjct: 143 NEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTL 202

Query: 246 INGYCKNKEIEGALSLYSEMLSK------GIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           I G C    I  AL  + EML+         +P+V+ ++ +  GL ++   E A  LF+E
Sbjct: 203 IKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNE 262

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   GV  +  T+   ID LCK G +++A +L   +  +    ++  Y SLI G C  G 
Sbjct: 263 MVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGD 322

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  A ELF S+P     P+V++Y+++I G C   ++++A  LF +M    + P+V T  +
Sbjct: 323 LNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGV 382

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           L++      +     EL   +K   +  D  I  I +D L KN     ++  F       
Sbjct: 383 LLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFN------ 436

Query: 480 EVDESNVK 487
           E++  N+K
Sbjct: 437 ELESYNMK 444



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 189/367 (51%), Gaps = 6/367 (1%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++  ++ GL K     +   L  QM    + P+++T   +I   C     NE       +
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           M +G  P+VVTF  ++  LC   ++ EA++L   M + G  P+  TY TL+ G C  G +
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212

Query: 221 NHAKELFVSMES------MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           N A +    M +        C+  V SYSI+I+G CK    E A+ L++EM+ +G++P+V
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNV 272

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V  + L   L +  QV +A KL + M + G+  + +TY + I G C  G +  A ELF +
Sbjct: 273 VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVS 332

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     E D+ +YN LI+G CK+ ++E A++LF  +    + P+V T  +++  L   G+
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D A++LF  ++  A+  ++    + + G  +     + ++L ++++  N+  D      
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 455 VVDLLAK 461
           ++D L K
Sbjct: 453 LIDGLCK 459


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/465 (40%), Positives = 292/465 (62%), Gaps = 9/465 (1%)

Query: 3   RVSH---GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           R++H      VLG++ K    PDA+TF +LI G C E  I EA  LF ++   G +PDV 
Sbjct: 139 RLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVI 198

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y+T++NGLC++ +T +AL L  +M          C+PN V YTTIID LCK+  V+ A 
Sbjct: 199 SYSTVINGLCKSGNTSMALQLLRKMEEKG------CKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +LL +M D+ I P+VVTY++++ GFC     NEA  LF EM+ + V PN VTF +++D L
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G + EA  + + M + G  P+A+TYN L+DG+CL  +++ A+++   M   GC   V
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY+ILINGYCK + ++ A SL  EM  K + PD V ++TL  GL ++ + + A  LF E
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M  +G+  D  TY T +DGLCK+G++ EA++L  +++  K E DI  YN LI+G+  +G+
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LE+A ELF  L    + P + TY+IMI GL  +G  D+A +LF  ME++  +PN  ++++
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNV 552

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           +I+GF++  + S  I L+ +M       D+S   +++DL +++EI
Sbjct: 553 IIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRDEI 597



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 188/383 (49%), Gaps = 35/383 (9%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D A     +M   N +P+VV +   +      K ++    L  +M   GV  NV + N+
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF------- 227
           +++ LC+   +  A  +L  M + G++PDA T+NTL++G C+ G +  A  LF       
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 228 ----------------------------VSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
                                         ME  GCK  + +Y+ +I+  CK+  +  A+
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L SEM+ +GI PDVV ++T+  G   +  +  A  LF+EM    V  +T T+   +DGL
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G + EA  +F  +     E +   YN+L+DG C + +++ A ++   +      P V
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            +Y+I+I G C   ++D+A+ L ++M E  + P+ +T+  L++G  ++  P + + L  +
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M    ++PD    S ++D L K+
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKH 455



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 81/175 (46%)

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           ++ A   F  M R         +  F+  + K       V L + + +     ++ + N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+ LC+   +  A+ +   +    + P+ +T++ +I G C +G++ +A  LF +M    
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             P+VI++  +I G  +    S  ++LL KM+E    P+    + ++D L K+ +
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTL 247


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  368 bits (945), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 191/464 (41%), Positives = 290/464 (62%), Gaps = 6/464 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +  V     VLG++ K    PDA+TF +LI GLC E +I EA  LF ++   G EP+V +
Sbjct: 141 LNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVIS 200

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT++NGLC+T +T +A+++F++M   NG     C+PN VTY+TIID LCK+  V+ A E
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQ-NG-----CKPNVVTYSTIIDSLCKDRLVNDAME 254

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +M ++ I PNV TY S++ GFC     NEA RLF EM+ + V PN VTF +++D LC
Sbjct: 255 FLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLC 314

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + EA  + + M + GV PD  TYN L+DG+CL   +N AK++F  M   GC     
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILINGYCK++ ++ A SL +EM  K + PD V ++TL  GL ++ + + A  LF EM
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   +  TY   +DG CK+G++ EA++L  +++  K E +I  Y  LI+G+  +G+L
Sbjct: 435 CSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKL 494

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E+A ELF  L      P++ TY++MI GL  +G  D+A DLF  ME++  +PN  +++++
Sbjct: 495 EVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVM 554

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           I+GF++  + S  I L+ +M       + S   +++DL +++EI
Sbjct: 555 IQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEI 598



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 187/367 (50%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
            P+ V +   +    K+        L  QM    +  NV +   +I   C     + +  
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +  +M   G+ P+ +TFN +++ LC  GK+ EA  L + M++ G  P+  +Y T+++G C
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            TG  + A ++F  ME  GCK  V +YS +I+  CK++ +  A+   SEM+ +GI P+V 
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N++  G   + Q+  A +LF EM    V  +T T+   +DGLCK G + EA  +F T+
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                E DI  YN+L+DG C    +  A ++F  +      P   +Y+I+I G C   +M
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           D+A+ L  +M   A+ P+ +T+  L++G  ++  P + + L  +M      P+     I+
Sbjct: 390 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVIL 449

Query: 456 VDLLAKN 462
           +D   K+
Sbjct: 450 LDGFCKH 456



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 188/360 (52%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  +   +I+ LC+   VD +  +L +M    I P+ +T+ ++I G C      EA  LF
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM+ +G +PNV+++  +++ LCK G    A  +   M Q+G +P+  TY+T++D  C  
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKD 246

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             VN A E    M   G    VF+Y+ +++G+C   ++  A  L+ EM+ + + P+ V  
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             L  GL +   V  A  +F+ M   GV  D  TY   +DG C    + EA ++F  +  
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
             C     +YN LI+G CKS R++ A  L   +    L P+ VTYS ++ GLC  G+  +
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A +LF +M      PN++T+ +L+ GF +     + ++LL  MKE  + P+    +I+++
Sbjct: 427 ALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 486



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 139/273 (50%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A      M++   RP    +   L  F    + +    L   M+     H V+S +I
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN  C+   ++ ++S+  +M   GI PD +  N L  GL    +++ A +LF+EM + G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  +Y T I+GLCK G    AV++F  +    C+ ++  Y+++ID LCK   +  A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E    +    + PNV TY+ ++ G CN GQ+++A  LF +M    V+PN +TF +L+ G 
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +    S+   +   M E  V PD S  + ++D
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMD 346



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 128/242 (52%)

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           V+ A   F  M  +  + +V  +   +  + K K+    +SL ++M    +  +V   N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L  ++ V+ +  +  +M + G+  D  T+   I+GLC  G I EAVELF+ +    
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            E ++ +Y ++I+GLCK+G   +A+++F+ +      PNVVTYS +I  LC D  ++ A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +   +M E  + PNV T++ ++ GF  + + ++   L  +M   +VMP+    +I+VD L
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 460 AK 461
            K
Sbjct: 314 CK 315


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/462 (40%), Positives = 274/462 (59%), Gaps = 6/462 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F  L +ILK    PDA TFT+LI+GLC E +I EA  LF K+   G +P+V T
Sbjct: 118 LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT 177

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+  +T  A+ L   M  GN      C+PN V ++T+ID LCK+  V +A  
Sbjct: 178 YGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  K I PN+VTY S+I G C   +W     L  EM+D  + P+V T N ++D LC
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + EA  ++D+MI  GV P+  TYN L+DG CL   V+ A ++F +M    C   V 
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LINGYCK + ++ A+ L+ EM  + + P+ V +NTL  GL  + +++ A  LF EM
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D  TYRT  D LCKN ++ +A+ L   +     + DI+ Y +++DG+C++G L
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +LF +L    L PNV TY+IMI GLC  G + +A  LF +M +N   PN  T++++
Sbjct: 472 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 531

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            RGF+R NE  + IELL +M       D S  +++V +L+ +
Sbjct: 532 TRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD 573



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 190/367 (51%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TV +  ++  + K         L  QM    I P+V T   VI   C+    + A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TF  ++  LC  GK+ EA  L D MI  G +P+  TY TL++G C 
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SME   C+  V  +S LI+  CK++++  A +++SEM++KGI P++V 
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L  GL ++ + +    L +EM  + +  D +T  T +D LCK G + EA ++   + 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E ++  YN+L+DG C    +++A+++F ++     V NV++Y+ +I G C    +D
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  LF +M    + PN +T++ LI G   +      I L H+M     +PD      + 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 457 DLLAKNE 463
           D L KN 
Sbjct: 428 DYLCKNR 434



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 137/290 (47%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           +EA   F  M+ +   P+ V FN ++  + K         L   M   G+ PD +T   +
Sbjct: 52  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++  C   RV+ A      +  +G +    +++ LI G C   +I  AL L+ +M+ +G 
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +P+VV + TL  GL ++     A +L   M++     +   + T ID LCK+  + EA  
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +F  +       +I  YNSLI GLCK    +    L   +    ++P+V T + ++  LC
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            +G + +A D+   M    V PNV+T++ L+ G    NE    +++   M
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 4/266 (1%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +DEA    + M+     P    +N LL     T   +    L   M+S G    V++ +I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +IN  C    ++ A S  +++L  G +PD     TL  GL    ++  A  LFD+M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY T I+GLCK G    A+ L  ++    C+ ++  +++LID LCK  ++  A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            +F  +    + PN+VTY+ +I GLC   +      L  +M ++ ++P+V T + ++   
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 425 IR---INEPSKVIELL-HKMKEINVM 446
            +   + E   V++++ H+  E NV+
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVV 316



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 6/183 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +   ++     PD VT+ +L   LC    + +A AL   +     +PD+  
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT+++G+CR      A +LF  +++         +PN  TY  +I GLCK+G + +A +
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKG------LQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M      PN  TY  + RGF    +      L  EM+ +G   +V T  +++  L 
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 571

Query: 181 KNG 183
            +G
Sbjct: 572 DDG 574


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 194/425 (45%), Positives = 268/425 (63%), Gaps = 27/425 (6%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +PD  T   L   LC  +R+ E  A  T +   G  PD+ TY TL+ GLCR  H I   
Sbjct: 6   LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRV-HRI--- 61

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
                               +V    IIDGLCK G  D+AKE+  +MK + + PNV++Y+
Sbjct: 62  --------------------SVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYS 101

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S++ GFC A    E+KRLF EM+DQGVQPN+V FNV++D LCK GK+ EA +LL++ IQ 
Sbjct: 102 SLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQR 161

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+  D  TYN+L+DGFC  G ++ A++LF+SM S GC+H   SY+ILINGYCK  ++E A
Sbjct: 162 GIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEA 221

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           ++LY+EM   G +P+V  ++TL  GL +  +V  A KLF  M+ +G++ D+  Y  F+DG
Sbjct: 222 MNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDG 281

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCKNG + EA+ELF+ L+    + D  +Y+ LIDGLCK+G++EIA E F+ L    L PN
Sbjct: 282 LCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPN 341

Query: 379 VVTYSIMIGGLCNDGQMDKARDLF---LDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           VVT +IMI G C   Q+DKA  LF     MEEN   P++IT++ L+RGF   N+  +V+ 
Sbjct: 342 VVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVN 401

Query: 436 LLHKM 440
           LLHKM
Sbjct: 402 LLHKM 406



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 208/390 (53%), Gaps = 26/390 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIM-----------------EAA 43
           + RVS G   +  IL+  + PD VT+ +LIKGLC   RI                  EA 
Sbjct: 23  LNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAK 82

Query: 44  ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
            +F +++  G  P+V +Y++LV+G C       +  LF EM +     GV  +PN V + 
Sbjct: 83  EIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ----GV--QPNLVQFN 136

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
            +ID LCKEG V +AK+LL     + I  ++VTY S+I GFC   D + A++LF+ M  +
Sbjct: 137 VLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSK 196

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G + N +++ ++++  CK  K++EA  L + M Q G RP+  TY+TLL G   TG+V  A
Sbjct: 197 GCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDA 256

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            +LF  M++ G       Y I ++G CKN  +  A+ L++E+ S   K D   ++ L  G
Sbjct: 257 NKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDG 316

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK---C 340
           L +  +VE A++ F ++ + G+  +  T    I G C+   + +A  LF  +  ++   C
Sbjct: 317 LCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGC 376

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
             DI  YN+L+ G C+S +LE  + L   +
Sbjct: 377 TPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 205/406 (50%), Gaps = 33/406 (8%)

Query: 49  LRVFGCEPDVFTYTTLVNGLC---RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
           + + G  PD+FT   L N LC   R S  + A+        G    G +  P+ VTY T+
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMT-------GILRRGYI--PDIVTYNTL 51

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I GLC+   +                   V    +I G C     +EAK +F EM  QG+
Sbjct: 52  IKGLCRVHRIS------------------VATCIIIDGLCKVGHEDEAKEIFEEMKAQGM 93

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PNV++++ ++   C  GK++E+ RL + M+  GV+P+   +N L+D  C  G+V  AK+
Sbjct: 94  IPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKK 153

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L       G    + +Y+ LI+G+CK  ++  A  L+  M SKG + + + +  L  G  
Sbjct: 154 LLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYC 213

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +I +VE A  L++EM + G   +  TY T + GL + G + +A +LF  ++      D  
Sbjct: 214 KIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSC 273

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y   +DGLCK+G L  A+ELF  L       +  +YS +I GLC  G+++ A + F  +
Sbjct: 274 IYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQL 333

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSK---VIELLHKMKEINVMPD 448
            +  + PNV+T +++I GF R+ +  K   + E + KM+E    PD
Sbjct: 334 SQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPD 379



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL------------ 211
           G+ P++ T N++ + LC   ++ E    +  +++ G  PD  TYNTL+            
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 212 -----DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                DG C  G  + AKE+F  M++ G    V SYS L++G+C   ++E +  L++EM+
Sbjct: 65  TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV 124

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +G++P++V  N L   L +  +V  A KL +   + G+  D  TY + IDG CK G + 
Sbjct: 125 DQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLS 184

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            A +LF ++    CE +  +Y  LI+G CK  ++E A+ L+  +P     PNV TYS ++
Sbjct: 185 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 244

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GL   G++  A  LF  M+ + +  +   + + + G  +     + +EL +++K  N  
Sbjct: 245 TGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFK 304

Query: 447 PDASIVSIVVDLLAK 461
            D    S ++D L K
Sbjct: 305 LDFESYSRLIDGLCK 319



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 126/250 (50%), Gaps = 9/250 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+ SLI G C    +  A  LF  +   GCE +  +YT L+NG C+      A+NL+
Sbjct: 166 DLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLY 225

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM        V   PN  TY+T++ GL + G V  A +L   MK   I  +   Y   +
Sbjct: 226 NEMPQ------VGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFL 279

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C      EA  LF E+     + +  +++ ++D LCK GK++ A      + Q G++
Sbjct: 280 DGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQ 339

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESM---GCKHTVFSYSILINGYCKNKEIEGA 258
           P+  T N ++ GFC   +V+ A  LF  ME M   GC   + +Y+ L+ G+C++ ++E  
Sbjct: 340 PNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEV 399

Query: 259 LSLYSEMLSK 268
           ++L  +M  +
Sbjct: 400 VNLLHKMFKR 409


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/462 (40%), Positives = 274/462 (59%), Gaps = 6/462 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F  L +ILK    PDA TFT+LI+GLC E +I EA  LF K+   G +P+V T
Sbjct: 118 LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT 177

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+  +T  A+ L   M  GN      C+PN V ++T+ID LCK+  V +A  
Sbjct: 178 YGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  K I PN+VTY S+I G C   +W     L  EM+D  + P+V T N ++D LC
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + EA  ++D+MI  GV P+  TYN L+DG CL   V+ A ++F +M    C   V 
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LINGYCK + ++ A+ L+ EM  + + P+ V +NTL  GL  + +++ A  LF EM
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D  TYRT  D LCKN ++ +A+ L   +     + DI+ Y +++DG+C++G L
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +LF +L    L PNV TY+IMI GLC  G + +A  LF +M +N   PN  T++++
Sbjct: 472 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 531

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            RGF+R NE  + IELL +M       D S  +++V +L+ +
Sbjct: 532 TRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD 573



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 190/367 (51%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TV +  ++  + K         L  QM    I P+V T   VI   C+    + A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TF  ++  LC  GK+ EA  L D MI  G +P+  TY TL++G C 
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SME   C+  V  +S LI+  CK++++  A +++SEM++KGI P++V 
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L  GL ++ + +    L +EM  + +  D +T  T +D LCK G + EA ++   + 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E ++  YN+L+DG C    +++A+++F ++     V NV++Y+ +I G C    +D
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  LF +M    + PN +T++ LI G   +      I L H+M     +PD      + 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 457 DLLAKNE 463
           D L KN 
Sbjct: 428 DYLCKNR 434



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 137/290 (47%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           +EA   F  M+ +   P+ V FN ++  + K         L   M   G+ PD +T   +
Sbjct: 52  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++  C   RV+ A      +  +G +    +++ LI G C   +I  AL L+ +M+ +G 
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +P+VV + TL  GL ++     A +L   M++     +   + T ID LCK+  + EA  
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +F  +       +I  YNSLI GLCK    +    L   +    ++P+V T + ++  LC
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            +G + +A D+   M    V PNV+T++ L+ G    NE    +++   M
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 4/266 (1%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +DEA    + M+     P    +N LL     T   +    L   M+S G    V++ +I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +IN  C    ++ A S  +++L  G +PD     TL  GL    ++  A  LFD+M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY T I+GLCK G    A+ L  ++    C+ ++  +++LID LCK  ++  A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            +F  +    + PN+VTY+ +I GLC   +      L  +M ++ ++P+V T + ++   
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 425 IR---INEPSKVIELL-HKMKEINVM 446
            +   + E   V++++ H+  E NV+
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVV 316



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 6/197 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +   ++     PD VT+ +L   LC    + +A AL   +     +PD+  
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT+++G+CR      A +LF  +++         +PN  TY  +I GLCK+G + +A +
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKG------LQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M      PN  TY  + RGF    +      L  EM+ +G   +V T  +++  L 
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 571

Query: 181 KNGKMDEASRLLDLMIQ 197
            +G      ++L   +Q
Sbjct: 572 DDGLDQSVKQILCKYVQ 588


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  362 bits (929), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 187/462 (40%), Positives = 269/462 (58%), Gaps = 6/462 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+   F VLG ILK  + P   TFT+LI+GLC E +I EA  LF K+   G +PDV T
Sbjct: 102 LNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLT 161

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+  +T  A+     M   N      C P  V Y+TIID LCK+  + +A  
Sbjct: 162 YGTLINGLCKVGNTSTAIRFLRSMEQRN------CRPTVVVYSTIIDSLCKDRQLTEALS 215

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M  K I PN  TY+S+I G C    W EA RLF  M+ + + P+ +TFN ++D LC
Sbjct: 216 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 275

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + +A  ++D+MIQ  ++PD  TYN+L+DG CL   +     +F +M   GC  +V 
Sbjct: 276 KEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVI 335

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LINGYCK + ++ A+ L+ EM  +G+ PD V +NTL  GL  + ++  A  LF EM
Sbjct: 336 SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 395

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D  TYR   D LCKN  + EA+ L   +     + DI  Y+ ++DG+C++G L
Sbjct: 396 VVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 455

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +LF  L    L P+V TY+IMI GLC  G + +A  LF +M+EN   PN  T++++
Sbjct: 456 EAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLI 515

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            RGF+R NE  + I+L  +M       D S  +++V++L+ +
Sbjct: 516 TRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDD 557



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 215/419 (51%), Gaps = 6/419 (1%)

Query: 39  IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           I +A +LF ++      P +  ++ L+  + R  H    L+L+++M +    FG+    N
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDS----FGI--PHN 88

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
           T T   +I+  C    +  A  +L  +     +P+  T+T++IRG C      EA +LF 
Sbjct: 89  TYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD 148

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           +M  +G QP+V+T+  +++ LCK G    A R L  M Q   RP    Y+T++D  C   
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDR 208

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           ++  A  LF  M + G     F+YS LI+G C     + A+ L+  M+ + I PD +  N
Sbjct: 209 QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 268

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           TL   L +   V +A  + D M ++ +  D  TY + +DG C    + + V +F T+   
Sbjct: 269 TLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            C   + +Y +LI+G CK   ++ A+ LF  +    L+P+ VTY+ +I GLC+ G++  A
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             LF +M     +P+++T+ +L     + +  ++ + LL  ++  N+ PD  I SIV+D
Sbjct: 389 IALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 447



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 160/334 (47%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           ++A  LF  M+     P++V F+ ++  + +         L   M   G+  + +T N L
Sbjct: 36  DDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNIL 95

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ FC   R+  A  +   +  +G + +  +++ LI G C   +I  AL L+ +M  +G 
Sbjct: 96  INSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGF 155

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +PDV+ + TL  GL ++     A +    M++         Y T ID LCK+  + EA+ 
Sbjct: 156 QPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALS 215

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           LF  +       +   Y+SLI GLC  G  + A+ LF ++    ++P+ +T++ ++  LC
Sbjct: 216 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 275

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            +G + KA  +   M ++ + P+V+T++ L+ G    +E  K + +   M     +P   
Sbjct: 276 KEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVI 335

Query: 451 IVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDES 484
             + +++   K +I   ++  F    QQ  + ++
Sbjct: 336 SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDT 369



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 121/267 (45%), Gaps = 10/267 (3%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           MI H     +   NT+ D          A  LF  M  M    ++  +S L+    + K 
Sbjct: 20  MISHAFHSKSLNVNTIDD----------ALSLFNRMLRMRPPPSIVDFSKLLTSITRMKH 69

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
               LSLY +M S GI  +    N L      ++++  AF +  ++ + G    T T+ T
Sbjct: 70  YSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTT 129

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I GLC  G I EA++LF  +     + D+  Y +LI+GLCK G    A+   RS+    
Sbjct: 130 LIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN 189

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             P VV YS +I  LC D Q+ +A  LF DM    + PN  T+  LI G   +    + I
Sbjct: 190 CRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAI 249

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
            L + M    +MPD    + +VD L K
Sbjct: 250 RLFYAMIHRKIMPDQLTFNTLVDALCK 276



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 13/185 (7%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           H  VV G+I      PD VT+  L   LC   R+ EA  L   +     +PD+  Y+ ++
Sbjct: 393 HEMVVYGQI------PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 446

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
           +G+CR      A +LF ++++          P+  TYT +I+GLC++G + +A +L  +M
Sbjct: 447 DGMCRAGELEAARDLFSKLSSKG------LHPDVRTYTIMINGLCQQGLLAEASKLFGEM 500

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
            +    PN  TY  + RGF    +   A +LF EM+ +G   +V T  ++++ L  +G +
Sbjct: 501 DENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG-L 559

Query: 186 DEASR 190
           D++ +
Sbjct: 560 DQSVK 564



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 93/238 (39%), Gaps = 41/238 (17%)

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
            H   S S+ +N       I+ ALSL++ ML     P +V  + L   +  +        
Sbjct: 22  SHAFHSKSLNVN------TIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLS 75

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L+ +M   G+  +T+T                                    N LI+  C
Sbjct: 76  LYKQMDSFGIPHNTYTL-----------------------------------NILINSFC 100

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
              RL  A  +   +      P+  T++ +I GLC +G++ +A  LF  M      P+V+
Sbjct: 101 HLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVL 160

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           T+  LI G  ++   S  I  L  M++ N  P   + S ++D L K+     +L  F+
Sbjct: 161 TYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFS 218


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  360 bits (925), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 188/468 (40%), Positives = 276/468 (58%), Gaps = 6/468 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F VL +ILK    PD  TFT+LI+GLC E +I EA  LF K+   G +P+V T
Sbjct: 104 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 163

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+  +T  A+ L   M  GN      C+P+ V YT+IID LCK+  V +A  
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVVIYTSIIDSLCKDRQVTEAFN 217

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  QM  + I P++ TYTS++   C   +W     L  +M++  + P+VV F+ ++D LC
Sbjct: 218 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 277

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  ++D+MIQ GV PD  TY TL+DG CL   ++ A ++F  M   G    V 
Sbjct: 278 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 337

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LINGYCK  +I+ A+ L+ EM  K   PD   +NTL  GL  + +++ A  LF EM
Sbjct: 338 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEM 397

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D  TY   +D LCKN ++ EA+ L   +       DI+ YN +IDG+C++G L
Sbjct: 398 VARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 457

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +LF +L    L P+V TY+IMI GLC  G +++A  LF++M+ N   P+  T++ +
Sbjct: 458 EAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTI 517

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
            RGF++ NE  + I+LL +M       D S  +++V++L+ + +  +S
Sbjct: 518 ARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSS 565



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 184/366 (50%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ V +  ++  + K         L  QM    + PNV T   +I  FC+      A  +
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TF  ++  LC  GK+ EA  L D MI  G +P+  TY TL++G C 
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SME   C+  V  Y+ +I+  CK++++  A +L+S+M+ +GI PD+  
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +L   L  + + +    L ++M  + +  D   + T +D LCK G + EA E+   + 
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E D+  Y +L+DG C    ++ A+++F  +      P+V++Y+ +I G C   ++D
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  LF +M     +P+  T++ L+ G   +      I L H+M     MPD    SI++
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 413

Query: 457 DLLAKN 462
           D L KN
Sbjct: 414 DSLCKN 419



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 157/337 (46%), Gaps = 43/337 (12%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ---HGVRPDAFTY 207
           ++A   F  ++     P++V F  ++  +    KM   S +L L  Q    GV P+ +T 
Sbjct: 38  DDALSSFNRLLHMHPPPSIVDFAKLLTSI---AKMKHYSTVLSLSTQMDSFGVPPNVYTL 94

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L++ FC   RV  A  +   +  +G +    +++ LI G C   +I  AL L+ +M+ 
Sbjct: 95  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G +P+VV + TL  GL ++     A +L   M++     D   Y + ID LCK+  + E
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 214

Query: 328 AVELF-------------------HTLRILKCEF-----------------DIRAYNSLI 351
           A  LF                   H L  L CE+                 D+  +++++
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNL-CEWKHVTTLLNQMVNSKILPDVVIFSTVV 273

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           D LCK G++  A E+   +    + P+VVTY+ ++ G C   +MD+A  +F  M      
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           P+VI++  LI G+ +I++  K + L  +M     +PD
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD 370



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 127/273 (46%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + ++     P    +  LL         +    L   M+S G    V++ +I
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C    +  A S+ +++L  G +PD     TL  GL    ++  A  LFD+M   G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY T I+GLCK G    A+ L  ++    C+ D+  Y S+ID LCK  ++  A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ ++  LCN  +      L   M  + ++P+V+ F  ++   
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +  + ++  E++  M +  V PD    + ++D
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 309



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 35/242 (14%)

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           ++ ALS ++ +L     P +V    L   + ++        L  +M   GV  + +T   
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I+  C    +  A  +   +  L  + D   + +LI GLC  G++  AL LF  +    
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 375 LVPNVVTYSIMIGG-----------------------------------LCNDGQMDKAR 399
             PNVVTY  +I G                                   LC D Q+ +A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +LF  M    + P++ T+  L+     + E   V  LL++M    ++PD  I S VVD L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 460 AK 461
            K
Sbjct: 277 CK 278


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  360 bits (924), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 184/453 (40%), Positives = 276/453 (60%), Gaps = 6/453 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV  GF VL +I+K       VTF +LI GLC   +  +A  LF  +   G +PDV T
Sbjct: 170 LQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHT 229

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT++NGLC+   T+ A  LF +M    GE G  C+P+ VTY+TIID LCK+  V++A +
Sbjct: 230 YTTIINGLCKIGETVAAAGLFRKM----GEAG--CQPDVVTYSTIIDSLCKDRRVNEALD 283

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   MK K I PN+ TY S+I+G C    W EA  +  EMM   + PN+VTF+++++  C
Sbjct: 284 IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 343

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + EA  +L  M + GV P+  TY++L++G+ L   V  A++LF  M + GCK  VF
Sbjct: 344 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVF 403

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILINGYCK K I  A  L++EM+ +G+ PD+V +NTL  GL ++ ++  A  LF  M
Sbjct: 404 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 463

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D  TY   +DG CK GY+ +A  LF  ++    + ++  YN LID +CKS  L
Sbjct: 464 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 523

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A +LF  L    L PNV  Y+ +I GLC +G +D+A + F +MEE+   PN  +++++
Sbjct: 524 KEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVI 583

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           IRGF++  + S+ ++L+ +M+E   + D +  +
Sbjct: 584 IRGFLQHKDESRAVQLIGEMREKGFVADVATTA 616



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 239/458 (52%), Gaps = 7/458 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P  + F  L+  +       +A  +L  ++ + G  PD +T   L+N   +     +  +
Sbjct: 119 PCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFS 178

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  ++     + G+  +   VT+ T+I+GLCK G   +A EL   M  +  +P+V TYT+
Sbjct: 179 VLAKII----KLGL--QLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTT 232

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C   +   A  LF +M + G QP+VVT++ I+D LCK+ +++EA  +   M   G
Sbjct: 233 IINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 292

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+ FTYN+L+ G C   R   A  +   M S+     + ++S+LIN +CK   +  A 
Sbjct: 293 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEAR 352

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +   M   G++P+VV +++L  G     +V  A KLFD M   G   D ++Y   I+G 
Sbjct: 353 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGY 412

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   I EA +LF+ +       DI +YN+LIDGLC+ GRL  A +LF+++     +P++
Sbjct: 413 CKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 472

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TYSI++ G C  G + KA  LF  M+   + PN++ +++LI    +     +  +L  +
Sbjct: 473 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSE 532

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           +    + P+  I + +++ L K  +   +L +F   E+
Sbjct: 533 LFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE 570



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 220/428 (51%), Gaps = 11/428 (2%)

Query: 39  IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH---TIVALNLFEEMANGNGEFGVVC 95
           I +A A F  +      P +  +  L++ + +  H    +++L+   E+A          
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAG--------L 153

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
            P+T T   +I+   +   VD    +L ++    ++  +VT+ ++I G C    + +A  
Sbjct: 154 SPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVE 213

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           LF +M+ +G QP+V T+  I++ LCK G+   A+ L   M + G +PD  TY+T++D  C
Sbjct: 214 LFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLC 273

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
              RVN A ++F  M++ G    +F+Y+ LI G C       A ++ +EM+S  I P++V
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             + L     +   V  A  +   M   GV  +  TY + ++G      +VEA +LF  +
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               C+ D+ +YN LI+G CK+ R+  A +LF  +    L P++V+Y+ +I GLC  G++
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 453

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            +A DLF +M  N  +P++ T+ +L+ GF +    +K   L   M+   + P+  + +I+
Sbjct: 454 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 513

Query: 456 VDLLAKNE 463
           +D + K+ 
Sbjct: 514 IDAMCKSR 521


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  360 bits (923), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 182/454 (40%), Positives = 281/454 (61%), Gaps = 13/454 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+++LIKGLC E RI EA  LF  ++  GC PD  TY TL+ GLC+T +  +AL L 
Sbjct: 88  DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH 147

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM N  G +G+ C+P  ++Y+ IIDGLCK+   D+A+EL  +MK + + P+V++YTS+I
Sbjct: 148 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI 207

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GFC++  W +AK LF EM+D G+QP+V T  V++D  CK GK+ EA+ LL++M+  G  
Sbjct: 208 HGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCI 267

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            D  TY+TL+ G C+  R++ A +LF+SM+ +GC+    +Y  L+ G C+  +I  AL L
Sbjct: 268 LDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHL 327

Query: 262 YSEMLS-------KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           + EML+       K I+PDV   + L   L +  +V  A +L + M + G   D  TY T
Sbjct: 328 HQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 387

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL---- 370
            I GLC    I EA  LF +++ L C  D   Y +L+ GLC++G + IAL+L + +    
Sbjct: 388 LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 447

Query: 371 -PCGVLV-PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
              G+   P +++YSI+I GLC D + D+AR+LF +M+   ++P+VI++  LI GF    
Sbjct: 448 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSG 507

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +  K   L ++M ++ + PD +  S+++D+L K 
Sbjct: 508 KWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 541



 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 174/453 (38%), Positives = 276/453 (60%), Gaps = 12/453 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+++LIKGLC E RI EA  LF  ++  GC PD  TY TL+ GLC+T +  +AL L 
Sbjct: 381 DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH 440

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM N  G +G+ C+P  ++Y+ IIDGLCK+   D+A+EL  +MK + I P+V++YT++I
Sbjct: 441 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLI 500

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GFC +  W +AK LF EM+D G+QP+V T +V++D LCK GK+ EA++LL+++IQ G  
Sbjct: 501 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 560

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            D  T  TL+ G C+  R++ A +LF+ M+ +GC   V + + L+ G C++  I+ AL L
Sbjct: 561 LDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 620

Query: 262 YSEMLSK----GI--KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +  MLS     GI  KP+ + ++ +  GL +  + + A +LF EM+  GV  D  +Y + 
Sbjct: 621 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 680

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I G C++G   +A  LF+ +  +  + D+  ++ LID LCK G++  A EL   +     
Sbjct: 681 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 740

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           +PN VTY+ ++ GLC + ++ +A  LF+ M++   +P+V+T+  L++G  +       +E
Sbjct: 741 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE 800

Query: 436 LLHKMKE------INVMPDASIVSIVVDLLAKN 462
           L  KM         N  PD    SI++D L K+
Sbjct: 801 LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 833



 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 145/369 (39%), Positives = 229/369 (62%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  +++     D VT T+L+KGLC + RI +A  LF K++  GC P+V T 
Sbjct: 542 GKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTC 601

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GLC++ +  +AL L + M +    +G+ C+PN ++Y+ IIDGLCK G  D+A+EL
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK   + P+V++YTS+I GFC +  W +AK LF EM+D GVQP+V TF+V++D LCK
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 721

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA+ LL++MIQ G  P+  TY TL+ G C+  R++ A +LF+ M+ +GC   V +
Sbjct: 722 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVT 781

Query: 242 YSILINGYCKNKEIEGALSLYSEMLS------KGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           Y  L+ G C+   I+ AL L+ +MLS         KPDV+ ++ +  GL +  + + A +
Sbjct: 782 YGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE 841

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           LF EM+  GV  +  +Y + I G C++G + +A  LF+ +     + +   Y+ +I G C
Sbjct: 842 LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 901

Query: 356 KSGRLEIAL 364
           K G+++ AL
Sbjct: 902 KEGQIDKAL 910



 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 163/490 (33%), Positives = 263/490 (53%), Gaps = 48/490 (9%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+++LIKGLC + RI EA  LF  ++  GC PD   Y TL+ GLC+T    +AL+L 
Sbjct: 269 DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 328

Query: 82  EEMANGNGEFGVVC-EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           +EM N   ++G+ C  P+  T + +ID LCKEG V +A ELL  M  +    ++VTY+++
Sbjct: 329 QEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 388

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI---- 196
           I+G C     +EA  LF+ M   G +P+ +T+  +M  LC+ G ++ A +L   M+    
Sbjct: 389 IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 448

Query: 197 QHGVR--PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           ++G++  P   +Y+ ++DG C   R + A+ELF  M++ G    V SY+ LI+G+C + +
Sbjct: 449 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGK 508

Query: 255 IEGALSLYSEMLSKGIKPDV-----------------------------------VIHNT 279
            E A  L++EML  GI+PDV                                   V   T
Sbjct: 509 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTT 568

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI-- 337
           L  GL   H++ +A +LF +MQ+ G   +  T  T + GLC++G I  A+EL   +    
Sbjct: 569 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 628

Query: 338 ----LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
               + C+ +  +Y+ +IDGLCK GR + A ELF+ +    ++P+V++Y+ +I G C  G
Sbjct: 629 SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG 688

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           +   A+ LF +M +  V P+V TF +LI    +  +  +  ELL  M +   +P+    +
Sbjct: 689 KWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYT 748

Query: 454 IVVDLLAKNE 463
            +V  L  N+
Sbjct: 749 TLVKGLCMND 758



 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 173/559 (30%), Positives = 277/559 (49%), Gaps = 118/559 (21%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  ++++ +I GLC + R  EA  LF +++  G  PDV +YT+L++G C +     A  L
Sbjct: 163 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCL 222

Query: 81  FEEMAN--------GNGEF-------GVVCEPN--------------TVTYTTIIDGLCK 111
           F EM +         +G         G V E N               VTY+T+I GLC 
Sbjct: 223 FNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCM 282

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-------QG 164
           +  + +A +L + MK    +P+ + Y ++++G C     N A  L  EM++       + 
Sbjct: 283 KHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC 342

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           ++P+V T ++++D LCK GK+ EA+ LL++MIQ G   D  TY+TL+ G C+  R++ A 
Sbjct: 343 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 402

Query: 225 ELFVSMESMG-----------------------------------------CKHTVFSYS 243
            LF+SM+ +G                                         CK T+ SYS
Sbjct: 403 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 462

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I+I+G CK++  + A  L+ EM ++GI PDV+ + TL  G     + E+A  LF+EM   
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522

Query: 304 GVAADTWTYRTFIDGLCKNGYIVE-----------------------------------A 328
           G+  D  T    ID LCK G ++E                                   A
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL-----PCGV-LVPNVVTY 382
            +LF  ++ L C  ++    +L+ GLC+SG ++IALEL +++     P G+   PN ++Y
Sbjct: 583 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 642

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           SI+I GLC  G+ D+AR+LF +M+   V+P+VI++  LI GF R  +      L ++M +
Sbjct: 643 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702

Query: 443 INVMPDASIVSIVVDLLAK 461
           I V PD +  S+++D+L K
Sbjct: 703 IGVQPDVTTFSVLIDMLCK 721



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 144/433 (33%), Positives = 235/433 (54%), Gaps = 20/433 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +++T+LI G C   +  +A  LF ++   G +PDV T + L++ LC+    I A  L
Sbjct: 491 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 550

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E +          C  + VT TT++ GLC +  + KA +L L+M+     PNVVT  ++
Sbjct: 551 LEVVIQRG------CILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 604

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQ------GVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           ++G C + +   A  L   M+          +PN +++++I+D LCK G+ DEA  L   
Sbjct: 605 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE 664

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   GV PD  +Y +L+ GFC +G+   AK LF  M  +G +  V ++S+LI+  CK  +
Sbjct: 665 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 724

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  A  L   M+ +G  P+ V + TL  GL    ++  A +LF +MQ+ G   D  TY T
Sbjct: 725 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 784

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEF------DIRAYNSLIDGLCKSGRLEIALELFR 368
            + GLC+ G I  A+EL   +     ++      D+ +Y+ +IDGLCK GR + A ELF+
Sbjct: 785 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK 844

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    ++PNV++Y+ +I G C  G+++ A+ LF +M +  V  N +T+ ++I GF +  
Sbjct: 845 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 904

Query: 429 EPSKVIELLHKMK 441
           +  K   L  KM+
Sbjct: 905 QIDKA--LFQKME 915



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/425 (36%), Positives = 217/425 (51%), Gaps = 30/425 (7%)

Query: 6   HGFVVLGRILKS-CF---------TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HGF + G+  K+ C           PD  T + LI  LC + +++EA  L   +   GC 
Sbjct: 501 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 560

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
            DV T TTLV GLC       A  LF +M        + C PN VT  T++ GLC+ G +
Sbjct: 561 LDVVTCTTLVKGLCMKHRISKATQLFLKMQK------LGCMPNVVTCATLMKGLCQSGNI 614

Query: 116 DKAKELLLQMKDK------NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
             A EL   M         N KPN ++Y+ +I G C     +EA+ LF EM   GV P+V
Sbjct: 615 KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDV 674

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           +++  ++   C++GK  +A  L + M+  GV+PD  T++ L+D  C  G+V  A EL   
Sbjct: 675 ISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 734

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   GC     +Y+ L+ G C N  I  A  L+ +M   G  PDVV + TL  GL +   
Sbjct: 735 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGN 794

Query: 290 VERAFKLFDEMQRN------GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           ++ A +L  +M  +          D  +Y   IDGLCK+G   EA ELF  ++ L    +
Sbjct: 795 IKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 854

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           + +Y SLI G C+SG+LE A  LF  +    +  N VTYS+MI G C +GQ+DKA  LF 
Sbjct: 855 VISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQ 912

Query: 404 DMEEN 408
            ME N
Sbjct: 913 KMEAN 917



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 222/442 (50%), Gaps = 45/442 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD+ TF  LI  LC   R+ E  A    +   G  PD+ TY+                  
Sbjct: 8   PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSI----------------- 50

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
                           P+  T + +ID LCKEG V +A ELL  M  +    ++VTY+++
Sbjct: 51  ---------------RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 95

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI---- 196
           I+G C     +EA  LF+ M   G +P+ +T+  +M  LC+ G ++ A +L   M+    
Sbjct: 96  IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 155

Query: 197 QHGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           ++G+  +P   +Y+ ++DG C   R + A+ELF  M++ G    V SY+ LI+G+C + +
Sbjct: 156 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGK 215

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            E A  L++EML  GI+PDV     L     +  +V  A +L + M   G   D  TY T
Sbjct: 216 WEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYST 275

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL---- 370
            I GLC    I EA +LF +++ L C  D  AY +L+ GLC++G++ IAL L + +    
Sbjct: 276 LIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT 335

Query: 371 ---PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
                  + P+V T S++I  LC +G++ +A +L   M +   + +++T+  LI+G    
Sbjct: 336 SQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCME 395

Query: 428 NEPSKVIELLHKMKEINVMPDA 449
           +  S+   L   M+++   PDA
Sbjct: 396 HRISEATWLFMSMQKLGCRPDA 417



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 188/359 (52%), Gaps = 22/359 (6%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV---------I 175
           M+   + P+  T+  +I   C  K  NE       +M +G  P++VT+++         +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D LCK GK+ EA+ LL++MIQ G   D  TY+TL+ G C+  R++ A  LF+SM+ +GC
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPDVVIHNTLFVGLFEIHQ 289
           +    +Y  L+ G C+   I  AL L+ EML+     GI  KP ++ ++ +  GL +  +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            + A +LF EM+  G+  D  +Y + I G C +G   +A  LF+ +  +  + D+     
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LID  CK G++  A EL   +     + ++VTYS +I GLC   ++ +A  LF+ M++  
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN-------VMPDASIVSIVVDLLAK 461
             P+ I +  L++G  +  + +  + L  +M           + PD +  S+++D+L K
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCK 359


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  360 bits (923), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 182/465 (39%), Positives = 286/465 (61%), Gaps = 9/465 (1%)

Query: 3   RVSH---GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           R+SH      V+G++ K    PDA+TF +LI GLC E +I EA  LF ++   G EP+V 
Sbjct: 143 RLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVI 202

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y T++NGLC+  +TI+A+ +F +M    G+      PN VTY TIID LCK+  V++A 
Sbjct: 203 SYNTVINGLCKNGNTIMAVRVFRKMEQNRGK------PNVVTYNTIIDSLCKDRLVNEAV 256

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E L +M D+ I P+VVTY +++ GFC     NEA RLF EM+ + V P+ VTFN+++D L
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G + EA  + + M + G  P+A+TYN L+DG+CL  +++ A ++   M   GC   +
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY+ILINGYCK+K +  A  L SEM  K + PD V ++TL  GL ++ +   A  LF E
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M  +G+  D   Y   +DG CK+G++ EA++L   +   + + +I  Y  LI G+  +G+
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LE+A ELF  L    + P++ TY++MI GL  +G  D+A + F  ME++  +P+  ++++
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNV 556

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           +I+GF++  + S  I+L+ +M       D+S   +++DL + +EI
Sbjct: 557 IIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHDEI 601



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 214/418 (51%), Gaps = 6/418 (1%)

Query: 39  IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           I +A   F ++      P V  +   +  + +      A++L  +M      FGV    N
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQM----DLFGVT--HN 130

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
             +   +I+ LC+   VD A  ++ +M    I+P+ +T+ ++I G C      EA  LF 
Sbjct: 131 VYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFN 190

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           EM+  G +PNV+++N +++ LCKNG    A R+   M Q+  +P+  TYNT++D  C   
Sbjct: 191 EMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDR 250

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            VN A E    M   G    V +Y+ +++G+C   ++  A  L+ EM+ + + PD V  N
Sbjct: 251 LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFN 310

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L  GL +   V  A  + + M   G   + +TY   +DG C +  + EA+++   +   
Sbjct: 311 ILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGK 370

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            C  ++ +YN LI+G CKS R+  A  L   +    L P+ VTYS ++ GLC  G+  +A
Sbjct: 371 GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREA 430

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +LF +M  + ++P+++ + +L+ GF +     + ++LL +M E  + P+  + +I++
Sbjct: 431 LNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILI 488



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 191/367 (52%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
            P+ V +   +  + K+     A  L  QM    +  NV +   +I   C     + A  
Sbjct: 93  RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVS 152

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +  +M   G+QP+ +TFN +++ LC  GK+ EA  L + M+  G  P+  +YNT+++G C
Sbjct: 153 VMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLC 212

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G    A  +F  ME    K  V +Y+ +I+  CK++ +  A+   SEM+ +GI PDVV
Sbjct: 213 KNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVV 272

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +NT+  G   + Q+  A +LF EM    V  DT T+   +DGLCK G + EA  +  T+
Sbjct: 273 TYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETM 332

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                E +   YN+L+DG C   +++ A+++   +      PN+ +Y+I+I G C   +M
Sbjct: 333 TEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRM 392

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           ++A+ L  +M E  + P+ +T+  L++G  ++  P + + L  +M    ++PD    SI+
Sbjct: 393 NEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSIL 452

Query: 456 VDLLAKN 462
           +D   K+
Sbjct: 453 LDGFCKH 459



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 143/273 (52%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A      M++   RP    +   L       + + A  L   M+  G  H V+S ++
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN  C+   ++ A+S+  +M   GI+PD +  NTL  GL    +++ A  LF+EM  +G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  +Y T I+GLCKNG  + AV +F  +   + + ++  YN++ID LCK   +  A+
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E    +    + P+VVTY+ ++ G C+ GQ+++A  LF +M    V+P+ +TF++L+ G 
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +    S+   +   M E    P+A   + ++D
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMD 349



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 130/242 (53%)

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++ A   F  M  M  + +V  +   +    K K+   A+SL ++M   G+  +V   N 
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L  +  V+ A  +  +M + G+  D  T+ T I+GLC  G I EAV LF+ +    
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            E ++ +YN++I+GLCK+G   +A+ +FR +      PNVVTY+ +I  LC D  +++A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +   +M +  + P+V+T++ ++ GF  + + ++   L  +M   NVMPD    +I+VD L
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 460 AK 461
            K
Sbjct: 317 CK 318



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 84/176 (47%)

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            ++ A   F  M R         +  F+  + K      AV L + + +     ++ + N
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            LI+ LC+   ++ A+ +   +    + P+ +T++ +I GLCN+G++ +A  LF +M  +
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
              PNVI+++ +I G  +       + +  KM++    P+    + ++D L K+ +
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRL 251


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 190/462 (41%), Positives = 268/462 (58%), Gaps = 6/462 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F VL +ILK    PD  TFT+LI+G+  E +I EA  LF K+   G  PDV T
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT 168

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+  +T  A+ L   M   N      C+PN   Y TIID LCK+  V +A  
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVFAYNTIIDSLCKDRQVTEAFN 222

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P++ TY S+I   C   +W     L  EM+D  + P+VV+FN ++D LC
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  ++D MIQ GV P+  TY  L+DG CL   ++ A ++F +M   GC   V 
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LINGYCK + I+ A+ L+ EM  + + PD V ++TL  GL  + +++ A  LF EM
Sbjct: 343 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 402

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                  +  TYR  +D LCKN Y+ EA+ L   +     + DI+  N  IDG+C++G L
Sbjct: 403 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 462

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +LF +L    L P+V TYSIMI GLC  G +D+A  LF +M+EN    N   ++ +
Sbjct: 463 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 522

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            RGF+R NE S+ I+LL +M       DAS +++ V +L+ +
Sbjct: 523 TRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDD 564



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 192/367 (52%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TV +  ++  + K         L  QM    I PN+ T   +I  FC+      A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TF  ++  +   GK+ EA  L D MI  G RPD  TY TL++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SM    C+  VF+Y+ +I+  CK++++  A +L+SEM++KGI PD+  
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L   L  + + +    L +EM  + +  D  ++ T +D LCK G + EA ++   + 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E ++  Y +L+DG C    ++ A+++F ++ C   +PNV++Y+ +I G C   ++D
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  LF +M    ++P+ +T+  LI G   +      I L H+M   + +P+     I++
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418

Query: 457 DLLAKNE 463
           D L KN 
Sbjct: 419 DYLCKNR 425



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 216/416 (51%), Gaps = 6/416 (1%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A + F ++      P    +  L+  + +  H    L+L  +M      FG+   PN  T
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQM----DSFGI--PPNIYT 98

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
              +I+  C    V  A  +L ++     +P+  T+T++IRG        EA  LF +M+
Sbjct: 99  LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI 158

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G +P+VVT+  +++ LCK G    A RLL  M+Q   +P+ F YNT++D  C   +V 
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  LF  M + G    +F+Y+ LI+  C   E +   +L +EM+   I PDVV  NT+ 
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L +  +V  A  + D+M + GV  +  TY   +DG C    + EAV++F T+    C 
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++ +YN+LI+G CK  R++ A+ LF  +    L+P+ VTYS +I GLC+  ++  A  L
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 398

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           F +M   + +PN++T+ +L+    +    ++ + LL  ++  N+ PD  + +I +D
Sbjct: 399 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 454



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 135/273 (49%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D A    + M++    P    +N LL         +    L   M+S G    +++  I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C    +  A S+ +++L  G +PD     TL  G++   ++  A  LFD+M   G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D  TY T I+GLCK G    A+ L  ++    C+ ++ AYN++ID LCK  ++  A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ +I  LCN  +      L  +M ++ ++P+V++F+ ++   
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +  + ++  +++ KM +  V P+    + ++D
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMD 314



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 29/224 (12%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     + G + +    PD VT+++LI GLC   R+ +A ALF ++      P++ TY 
Sbjct: 356 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 415

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGN------------------GEFGVV---------- 94
            L++ LC+  +   A+ L + +   N                  GE              
Sbjct: 416 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 475

Query: 95  -CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
             +P+  TY+ +I+GLC+ G +D+A +L  +M +     N   Y ++ RGF    + + A
Sbjct: 476 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 535

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            +L  EM+ +G   +  T  + +  L  +G      ++L   +Q
Sbjct: 536 IQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  359 bits (921), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 197/465 (42%), Positives = 280/465 (60%), Gaps = 12/465 (2%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           S  F +  ++  +  +P+  T   LI  LC  +R+ E  +    +   G  PDV TYT+L
Sbjct: 108 SQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSL 167

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           + GLC       A  LF  M        + C PN VTY T+I GLC+ G ++ A +L  +
Sbjct: 168 IKGLCMEHRISEATRLFIRMQK------LGCWPNVVTYGTLIKGLCRTGNINLALKLHQE 221

Query: 125 MKDK------NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           M +       N KPN+ +Y  +I   C    W EAKRLF EM+DQGV+P+VVTF+ ++D 
Sbjct: 222 MLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDT 281

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK G + EA + L+ M+  G+ PD FT+ +L++GFCL G ++ AKELF+SM S G +  
Sbjct: 282 LCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPD 341

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V SY++LI GYCK   +E A+ LY+EML  G  PD+     L  GLF   +V  A KLF 
Sbjct: 342 VISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFG 401

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            ++ + V  + +    F+DGLCKNG + EA+ELF+ L+    + DI ++N LIDGLCK+ 
Sbjct: 402 VVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKAR 461

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           +LE A ELF  L    L P+VVTY IMI G C +GQ+D A  LF  MEEN   PN++T+ 
Sbjct: 462 KLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYS 521

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            L+ GF + N+  +V++LLHKM + +V   ASI +IV D+++K+E
Sbjct: 522 ALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDE 566



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 220/403 (54%), Gaps = 35/403 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV  G   +  I++  + PD VT+TSLIKGLC E RI EA  LF +++  GC P+V TY 
Sbjct: 141 RVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYG 200

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+ GLCRT +  +AL L +EM NG   + + C+PN  +Y  IID LCK G   +AK L 
Sbjct: 201 TLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLF 260

Query: 123 LQMKDKNIKPNVV-----------------------------------TYTSVIRGFCYA 147
            +M D+ ++P+VV                                   T+TS+I GFC  
Sbjct: 261 NEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLV 320

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
            D + AK LF+ M  +G +P+V+++ V++   CK   ++EA +L + M++ G  PD  T+
Sbjct: 321 GDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTF 380

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             LL G  L G+V  AK+LF  ++       ++  S+ ++G CKN  +  A+ L++E+ S
Sbjct: 381 CVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKS 440

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
             +K D+   N L  GL +  ++E A++LF+++ + G+  D  TY   I+G CKNG +  
Sbjct: 441 YNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDN 500

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           A  LF  +    C  ++  Y++L+ G  K+ +LE  ++L   +
Sbjct: 501 ANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKM 543



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 187/359 (52%), Gaps = 9/359 (2%)

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           CK+G +   + L  Q  D  ++ +++++  ++      K +++   L+ +M   G+ PN 
Sbjct: 70  CKKGNITSTQAL--QFFDLMMR-SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNF 126

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
            T N++++ LC   ++ E    +  +++ G  PD  TY +L+ G C+  R++ A  LF+ 
Sbjct: 127 FTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIR 186

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK------GIKPDVVIHNTLFVG 283
           M+ +GC   V +Y  LI G C+   I  AL L+ EML+         KP++  +N +   
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L +I + + A +LF+EM   GV  D  T+   ID LCK G ++EA +   T+ +     D
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  + SLI+G C  G L+ A ELF S+P     P+V++Y+++I G C    +++A  L+ 
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 366

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +M      P++ TF +L++G     +     +L   +K   V  +  I S+ +D L KN
Sbjct: 367 EMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKN 425



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 184/368 (50%), Gaps = 6/368 (1%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           +++  ++  L K     +   L  +M    + PN  T   +I   C      E       
Sbjct: 92  ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAG 151

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           +M +G  P+VVT+  ++  LC   ++ EA+RL   M + G  P+  TY TL+ G C TG 
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 211

Query: 220 VNHAKELFVSM------ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +N A +L   M       ++ CK  +FSY+I+I+  CK  + + A  L++EM+ +G++PD
Sbjct: 212 INLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPD 271

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV  + L   L +   V  A K  + M   G+  D +T+ + I+G C  G +  A ELF 
Sbjct: 272 VVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
           ++     E D+ +Y  LI G CK+  +E A++L+  +      P++ T+ +++ GL   G
Sbjct: 332 SMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAG 391

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           ++  A+ LF  ++ +AV  N+    + + G  +     + +EL +++K  N+  D    +
Sbjct: 392 KVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFN 451

Query: 454 IVVDLLAK 461
            ++D L K
Sbjct: 452 CLIDGLCK 459


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 176/453 (38%), Positives = 268/453 (59%), Gaps = 6/453 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F V  +++K    PDAVTF +LI GLC   +  +A   F      GC+P V+T
Sbjct: 143 LQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYT 202

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT++NGLC+   T  A  LF++M          C+PN VTY  +ID LCK+  V++A +
Sbjct: 203 YTTIINGLCKIGETTAAAGLFKKMEEAG------CQPNVVTYNILIDSLCKDKLVNEALD 256

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   MK K I P++ TY S+I+G C  + W EA  L  EM    + PN+ TFNV++D +C
Sbjct: 257 IFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAIC 316

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +   M + GV PD  TY++L+ G+ L   +  A++LF +M + GCK   F
Sbjct: 317 KEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAF 376

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILI GYCK K I+ A  L++EM+ +G+ PD V +NTL  GL ++ ++  A  LF  M
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D +TY   +DG CK GY+ +A  LF  ++    + DI  YN LID +CK G L
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A +LF  L    L+PNV  Y+ +I  LC +G +D+A + F +ME +   P+  +++++
Sbjct: 497 KDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVI 556

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           IRGF++  + S+  +L+ +M++   + +A   +
Sbjct: 557 IRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 150/458 (32%), Positives = 239/458 (52%), Gaps = 9/458 (1%)

Query: 1   MGRVSHGFVVLGRILK-SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           MG+     + L + ++ +  +PD  T + LI       R+  A ++F+K+   G +PD  
Sbjct: 107 MGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAV 166

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           T+ TL+NGLC+      A+  F++  A+G       C+P   TYTTII+GLCK G    A
Sbjct: 167 TFNTLINGLCKVGKFAQAVEFFDDFEASG-------CQPTVYTYTTIINGLCKIGETTAA 219

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             L  +M++   +PNVVTY  +I   C  K  NEA  +F  M  + + P++ T+N ++  
Sbjct: 220 AGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQG 279

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LC   +  EAS LL+ M    + P+ FT+N L+D  C  G+V+ A+ +F +M  MG +  
Sbjct: 280 LCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPD 339

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +YS L+ GY    EI  A  L+  M++KG KPD   +N L  G  +  +++ A +LF+
Sbjct: 340 VVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFN 399

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM   G+  D   Y T I GLC+ G + EA +LF  +       D+  Y+ L+DG CK G
Sbjct: 400 EMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEG 459

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            L  A  LFR +    L P++  Y+I+I  +C  G +  AR LF ++    ++PNV  + 
Sbjct: 460 YLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYT 519

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +I    +     + +E    M+     PD    ++++
Sbjct: 520 TIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557



 Score =  240 bits (613), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 237/453 (52%), Gaps = 7/453 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P  + FT L+  +    +   A  +L  ++ + G  PD++T + L++         +A +
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +F +M     + G+  +P+ VT+ T+I+GLCK G   +A E     +    +P V TYT+
Sbjct: 152 VFSKMI----KLGL--QPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTT 205

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C   +   A  LF +M + G QPNVVT+N+++D LCK+  ++EA  +   M    
Sbjct: 206 IINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKR 265

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD FTYN+L+ G C   R   A  L   M S+     +F++++L++  CK  ++  A 
Sbjct: 266 ISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQ 325

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++  M   G++PDVV +++L  G     ++  A KLFD M   G   D ++Y   I G 
Sbjct: 326 GVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGY 385

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   I EA +LF+ +       D   YN+LI GLC+ GRL  A +LF+++     +P++
Sbjct: 386 CKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDL 445

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TYS+++ G C +G + KA  LF  M+   + P++  +++LI    +        +L  +
Sbjct: 446 FTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSE 505

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           +    ++P+  I + +++ L K  +   +L +F
Sbjct: 506 LFVQGLLPNVQIYTTIINNLCKEGLLDEALEAF 538



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 72/150 (48%)

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
           Y    + L   + +     DI   + LID      R+++A  +F  +    L P+ VT++
Sbjct: 110 YYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFN 169

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I GLC  G+  +A + F D E +   P V T+  +I G  +I E +    L  KM+E 
Sbjct: 170 TLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEA 229

Query: 444 NVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
              P+    +I++D L K+++   +L  F+
Sbjct: 230 GCQPNVVTYNILIDSLCKDKLVNEALDIFS 259


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 187/462 (40%), Positives = 271/462 (58%), Gaps = 6/462 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV  GF VL +I K    PD  TFT+LI+GLC E +I EA  LF K+   G +P+  T
Sbjct: 122 LNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVT 181

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++GLC+  ++  A+ L   M   N      CEPN +TY TIID L K+  V++A  
Sbjct: 182 YGTLIHGLCKVGNSRAAIRLLRSMVQKN------CEPNVITYNTIIDCLFKDRQVNEALN 235

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  K I PNV TY S+I G C   +W     L  EM+D  + PNVV F  ++D LC
Sbjct: 236 IFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALC 295

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +  A  ++D+MIQ GV PD  TY  L+DG CL   ++ A ++F +M   GC   V 
Sbjct: 296 KEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVI 355

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYS LINGYCK + I+ A+ L+ EM  + + P++V +NTL  GL  + ++  A  LF EM
Sbjct: 356 SYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEM 415

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G   D  TYR  +D LCK  ++ +A+ +   +       DI++YN +IDG+C+ G L
Sbjct: 416 VASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGEL 475

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +LF SL    L P+V TY+IMI GLC  G + +A  LF +M  +   P+  T++++
Sbjct: 476 EAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLI 535

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            RGF+R NE    I+LL +M       DAS ++++V++L+ +
Sbjct: 536 TRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDD 577



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 216/420 (51%), Gaps = 8/420 (1%)

Query: 39  IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           I EA + F ++      P V  +  ++  +    H    L+L ++M       G+   P+
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQM----DSLGI---PS 107

Query: 99  TV-TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            V T   +I+  C    VD    +L ++     +P+  T+T++IRG C      EA  LF
Sbjct: 108 DVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLF 167

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M+ +G QPN VT+  ++  LCK G    A RLL  M+Q    P+  TYNT++D     
Sbjct: 168 DKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKD 227

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
            +VN A  +F  M + G    V +Y+ +I+G CK  E +   +L +EM+   I P+VVI 
Sbjct: 228 RQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIF 287

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
            TL   L +   V  A  + D M + GV  D  TY   +DG C    + EA ++F T+  
Sbjct: 288 TTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR 347

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
             C  ++ +Y++LI+G CK  R++ A+ LF  +    LVPN+VTY+ +I GLC+ G++  
Sbjct: 348 KGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRD 407

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  LF +M  +  +P+++T+ +L+    +     + + +L  ++  N+ PD    +IV+D
Sbjct: 408 AIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVID 467



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 189/382 (49%)

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           E +++ N    +   P+ V +  I+  +           L  QM    I  +V T   VI
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
             FC+    +    +  ++   G QP+  TF  ++  LC  GK+ EA  L D M+  G +
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TY TL+ G C  G    A  L  SM    C+  V +Y+ +I+   K++++  AL++
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +SEM++KGI P+V  +N++  GL +  + +    L +EM  + +  +   + T +D LCK
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCK 296

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G +  A ++   +     E D+  Y +L+DG C    ++ A ++F ++      PNV++
Sbjct: 297 EGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVIS 356

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           YS +I G C   ++DKA  LF +M +  +VPN++T++ LI G   +      I L H+M 
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416

Query: 442 EINVMPDASIVSIVVDLLAKNE 463
               +PD     I++D L K  
Sbjct: 417 ASGQIPDLVTYRILLDYLCKTR 438



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 169/328 (51%), Gaps = 6/328 (1%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           H   ++  ++ S   P+ V FT+L+  LC E  +  A  +   +   G EPDV TYT L+
Sbjct: 267 HVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALM 326

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
           +G C  S    A  +F+ M          C PN ++Y+T+I+G CK   +DKA  L  +M
Sbjct: 327 DGHCLRSEMDEADKVFDTMVRKG------CAPNVISYSTLINGYCKIQRIDKAMYLFEEM 380

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
             + + PN+VTY ++I G C+     +A  LF EM+  G  P++VT+ +++D LCK   +
Sbjct: 381 CQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHL 440

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           D+A  +L  +    + PD  +YN ++DG C  G +  A +LF S+ S G    V++Y+I+
Sbjct: 441 DQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIM 500

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ING C    +  A  L+ EM + G  PD   +N +  G    ++   A +L  EM   G 
Sbjct: 501 INGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGF 560

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFH 333
           +AD  T    ++ L  +G      ++ H
Sbjct: 561 SADASTITLIVEMLSDDGLDQSVKQILH 588



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 29/224 (12%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     +   + +    P+ VT+ +LI GLC   R+ +A ALF ++   G  PD+ TY 
Sbjct: 369 RIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYR 428

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGN------------------GEFGVVCE-------- 96
            L++ LC+T H   A+ + + +   N                  GE     +        
Sbjct: 429 ILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSK 488

Query: 97  ---PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
              P+  TYT +I+GLC +G + +A +L  +M      P+  TY  + RGF    +   A
Sbjct: 489 GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSA 548

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            +L  EM+ +G   +  T  +I++ L  +G      ++L   +Q
Sbjct: 549 IQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  357 bits (915), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 181/473 (38%), Positives = 290/473 (61%), Gaps = 7/473 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVF 59
           M R   GF VL    K     + VTFT+LI+GL AE+++ +A  LF KL R   CEPD  
Sbjct: 120 MHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEV 179

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            Y T+++GLC+  HT  A +L   M  G      + +P+T  Y  +ID  CK+G +D A 
Sbjct: 180 MYGTVMDGLCKKGHTQKAFDLLRLMEQG------ITKPDTCIYNIVIDAFCKDGMLDGAT 233

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            LL +MK KNI P+++TYTS+I G      W + + LF+EM+   + P+V TFN ++D L
Sbjct: 234 SLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGL 293

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK GK+++A  ++  MI+ GV P+  TYN ++DG+CL G++  A+ +F SM   G +  +
Sbjct: 294 CKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDI 353

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY+ LINGY + K+++ A+ L+ E+   G+KP +V  + L  GLFE+ + E A   FDE
Sbjct: 354 ISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDE 413

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           MQ  G   + +T+ T + G  KNG + EA+  FH L   + + +I+ Y ++I+GLCK+G+
Sbjct: 414 MQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGK 473

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A   F  LP   L P+V+TY+ MI G C +G +D+A+D+   ME+N  +P+  T+++
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNV 533

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           ++RGF R ++ S++   L ++   +   +A+ V +++D++A++   LN +P F
Sbjct: 534 IVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEF 586



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 168/359 (46%), Gaps = 41/359 (11%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  + +    PD +T+TSLI GL   S+  +   LF ++      PDV T+ ++++GLC
Sbjct: 235 LLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLC 294

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A    EE+     E GV  EPN +TY  ++DG C  G + +A+ +   M DK 
Sbjct: 295 KEGKVEDA----EEIMTYMIEKGV--EPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKG 348

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I+P++++YT++I G+   K  ++A +LF E+   G++P++VT +V++  L + G+ + A 
Sbjct: 349 IEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAK 408

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGF----------------------------------- 214
              D M   G  P+ +T+ TLL G+                                   
Sbjct: 409 IFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGL 468

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G+++ A   F  +  +G    V +Y+ +I+GYC+   ++ A  +  +M   G  PD 
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDN 528

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
             +N +  G F   +V        E+     + +  T    +D + ++  ++  +  FH
Sbjct: 529 RTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFH 587



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 1/274 (0%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A  L   M+     P A +++ LL         +    +F  +  +      F+ S 
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           ++N  C     +   S+ +    KGI  + V   TL  GLF  ++V+ A  LF ++ R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 305 VA-ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           +   D   Y T +DGLCK G+  +A +L   +     + D   YN +ID  CK G L+ A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             L   +    + P+++TY+ +I GL    Q +K R LFL+M    + P+V TF+ +I G
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDG 292

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +  +     E++  M E  V P+    ++V+D
Sbjct: 293 LCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMD 326


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  356 bits (913), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 181/462 (39%), Positives = 281/462 (60%), Gaps = 6/462 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            V   F  LG++ K    P  VTF +L+ GLC++++I++A  LF ++   G  P + TYT
Sbjct: 121 HVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYT 180

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T++ GLC+  HT  AL L ++M          C+P+ V Y T+ID LCK+   ++A    
Sbjct: 181 TIIKGLCKIGHTTNALQLLKKMEEKG------CKPDVVAYNTVIDSLCKDRRANEAMYFF 234

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M D+ I PNVVTY+S++ GFC     NEA  LF +M+ + V PN VTF +++D LCK 
Sbjct: 235 SEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKE 294

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G + EA R+ ++M ++GV PDA+TY+ L+DG+CL  +++ A++LF  M   G   +V  Y
Sbjct: 295 GMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVY 354

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +ILING+CK++ +  A +L SEM  + + PD V ++TL  G  +  + + A KLF EM  
Sbjct: 355 NILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS 414

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  D+ TY   +DGLCK+G++ EA  L   ++  K E  I  YN LI G+C  G+LE 
Sbjct: 415 YGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEA 474

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A ELF +L    + P+VVTY++MI GL  +G  ++A ++F  M  N  +PN  T+++ I+
Sbjct: 475 ARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQ 534

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           GF+R  +PS  + L+ +M       D+S   +++DL + +EI
Sbjct: 535 GFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESNDEI 576



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 199/370 (53%), Gaps = 6/370 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G  ++   +L ++ +    PD V + ++I  LC + R  EA   F+++   G  P+V T
Sbjct: 189 IGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVT 248

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+++++G C       A +LF++M   N        PNTVT+T ++DGLCKEG + +A+ 
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMIGRN------VMPNTVTFTILVDGLCKEGMILEARR 302

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M +  ++P+  TY++++ G+C     +EA++LF  M+ +G  P+V  +N++++  C
Sbjct: 303 VFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHC 362

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+ +++EA  LL  M    + PD  TY+TL+ GFC  GR   A++LF  M S G      
Sbjct: 363 KSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSI 422

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YSIL++G CK+  ++ A  L   M    I+P + I+N L  G+    ++E A +LF  +
Sbjct: 423 TYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNL 482

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     TY   I GL K G   EA E+F  + +  C  +   YN  I G  ++G  
Sbjct: 483 FVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDP 542

Query: 361 EIALELFRSL 370
             A+ L   +
Sbjct: 543 SNAVRLIEEM 552



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 200/383 (52%), Gaps = 2/383 (0%)

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + +A+ N   G+   P  V +  ++  L K+        L  QM   NI+PNV T T +I
Sbjct: 52  DAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILI 111

Query: 142 RGFCYAK--DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
              C++     + A     +M   G+QP  VTF  +++ LC   K+ +A +L D + + G
Sbjct: 112 NCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMG 171

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P   TY T++ G C  G   +A +L   ME  GCK  V +Y+ +I+  CK++    A+
Sbjct: 172 FAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAM 231

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             +SEM+ +GI P+VV ++++  G   + Q+  A  LF +M    V  +T T+   +DGL
Sbjct: 232 YFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGL 291

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I+EA  +F  +     E D   Y++L+DG C   +++ A +LF  +      P+V
Sbjct: 292 CKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSV 351

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             Y+I+I G C   ++++A+ L  +M +  + P+ +T+  L++GF +   P    +L  +
Sbjct: 352 RVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKE 411

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M    ++PD+   SI++D L K+
Sbjct: 412 MCSYGLLPDSITYSILLDGLCKH 434



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 41/187 (21%)

Query: 318 GLCKN----GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           G C N      + +AV  F+ L  ++    +  +N L+  L K       + L + +   
Sbjct: 39  GFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLS 98

Query: 374 VLVPNVVTYSIMI-------------------------------------GGLCNDGQMD 396
            + PNV T +I+I                                      GLC+  ++ 
Sbjct: 99  NIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKII 158

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  LF ++ +    P++IT+  +I+G  +I   +  ++LL KM+E    PD    + V+
Sbjct: 159 DAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218

Query: 457 DLLAKNE 463
           D L K+ 
Sbjct: 219 DSLCKDR 225


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  355 bits (912), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 182/463 (39%), Positives = 286/463 (61%), Gaps = 7/463 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVF 59
           M R   GF VL    K     + VTFT+LI+GL AE+++ +A  LF KL R   CEP+  
Sbjct: 120 MHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEV 179

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            Y T++NGLC+  HT  A +L   M  G+       +PNT TYT +ID  CK+G +D A 
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPNTRTYTIVIDAFCKDGMLDGAT 233

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            LL +MK K+I P++ TY+++I   C    W   + LF+EM+   + PNV TFN ++D L
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK GK+++A  ++  MI+ GV PD  TYN ++DG+ L G+V+ A+E+F SM +   +  +
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDI 353

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY+ILINGY + K+I+ A+ +  E+  KG+KP +V  N L  GLFE+ + + A   FDE
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G   D +T+ T + G  KNG + EA+  FH L   + + +I+ Y ++IDGLCK+G+
Sbjct: 414 MLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGK 473

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A   F  LP   L P+V+TY+ MI G C +G +D+A+D+   ME+N  + +  T+++
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++RGF+R N+ S++   L ++   +   +A+ V +++D++A++
Sbjct: 534 IVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAED 576



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 205/423 (48%), Gaps = 7/423 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A +LF ++      P V +++ L+  +    H    ++LF E+        +    +  
Sbjct: 55  DAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHK------LRIPVHEF 108

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
             + +++  C     D    +L     K I  N VT+T++IRG        +A  LF ++
Sbjct: 109 ILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKL 168

Query: 161 MDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           + + + +PN V +  +M+ LCK G   +A  LL LM Q   +P+  TY  ++D FC  G 
Sbjct: 169 VRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGM 228

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++ A  L   M+       +F+YS LI+  CK  + E   +L+ EM+   I P+V   N+
Sbjct: 229 LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNS 288

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  GL +  +VE A ++   M   GV  D  TY   IDG    G +  A E+F ++    
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS 348

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            E DI +YN LI+G  +  +++ A+++ R +    L P++VT ++++ GL   G+   A+
Sbjct: 349 IEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           + F +M     +P++ T   L+ G+ +     + +   HK++      +  I + V+D L
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468

Query: 460 AKN 462
            KN
Sbjct: 469 CKN 471



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 156/321 (48%), Gaps = 1/321 (0%)

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           F   K  ++A  LF +M+     P+V +F+ ++  +           L   + +  +   
Sbjct: 47  FQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVH 106

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
            F  + +++  CL  R +    +       G  +   +++ LI G     +++ A+ L+ 
Sbjct: 107 EFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFK 166

Query: 264 EMLSKGI-KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           +++ + I +P+ V++ T+  GL +    ++AF L   M++     +T TY   ID  CK+
Sbjct: 167 KLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKD 226

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G +  A  L + ++      DI  Y++LID LCK  + E    LF  +    + PNV T+
Sbjct: 227 GMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTF 286

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + +I GLC +G+++ A ++   M E  V P+VIT++M+I G+    +  +  E+   M  
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMIN 346

Query: 443 INVMPDASIVSIVVDLLAKNE 463
            ++ PD    +I+++  A+ +
Sbjct: 347 KSIEPDIISYNILINGYARQK 367



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 36/251 (14%)

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ----- 301
           N +   K ++ A SL+ +M+     P V   + L   +  +        LF E+      
Sbjct: 45  NEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIP 104

Query: 302 ------------------------------RNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
                                         + G+  +  T+ T I GL     + +AV L
Sbjct: 105 VHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHL 164

Query: 332 FHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           F  L R   CE +   Y ++++GLCK G  + A +L R +  G   PN  TY+I+I   C
Sbjct: 165 FKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFC 224

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            DG +D A  L  +M++ ++ P++ T+  LI    ++++   V  L  +M  +N+ P+  
Sbjct: 225 KDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVC 284

Query: 451 IVSIVVDLLAK 461
             + V+D L K
Sbjct: 285 TFNSVIDGLCK 295



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 16/201 (7%)

Query: 6   HGFVVLGR----------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG   LGR          +L +   PD  T  +L+ G      + EA + F KL     +
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
            ++  YT +++GLC+      A   FE++        +   P+ +TYT +I G C+EG +
Sbjct: 456 TNIQIYTAVIDGLCKNGKLDKAHATFEKLP------LIGLHPDVITYTAMISGYCQEGLL 509

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+AK++L +M+D     +  TY  ++RGF  +   +E K    E+  +       T  ++
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569

Query: 176 MDELCKNGKMDEASRLLDLMI 196
           MD + ++  +      + L I
Sbjct: 570 MDIIAEDPSITRKMHWIKLHI 590


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  355 bits (911), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 180/453 (39%), Positives = 269/453 (59%), Gaps = 6/453 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F VL +I+K    P  VTFT+LI  LC   +  +A  LF  +   GC PDV+T
Sbjct: 146 LQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYT 205

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT++NGLC+   T  A  L ++M          C+PN VTY+TIID   K+  V++A +
Sbjct: 206 YTTIINGLCKIGETAAAAGLLKKMEEAG------CQPNVVTYSTIIDSHRKDRRVNEALD 259

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   MK K I P++ TY S+I+G C    W EA  L  EM    + P++VTFNV++D +C
Sbjct: 260 IFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTIC 319

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +L  M + GV PD  TY++L+ G+ L   V  A++LF +M + GCK  VF
Sbjct: 320 KEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVF 379

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILINGYCK K I+ A  L++EM+ +G+ P+ V +NTL  GL ++  +  A  LF  M
Sbjct: 380 SYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNM 439

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   + +TY   +DG CK GY  +A  LF  ++    + ++  YN LID +CKSG L
Sbjct: 440 HTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNL 499

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A +LF  L    L PN   Y+ +I GLC +G +D+A + F +MEE+   P+ I+++++
Sbjct: 500 RDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVI 559

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           IRGF+   + S+ ++L+ +M++   + D    +
Sbjct: 560 IRGFLHHKDESRAVQLIGEMRDKGFIADVGTTA 592



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 233/458 (50%), Gaps = 7/458 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P  + FT L+  +    +  +     TK + + G  P+++T + L+N         +A +
Sbjct: 95  PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  ++     + G+  +P  VT+TT+I+ LCK G   +A EL   M  +  +P+V TYT+
Sbjct: 155 VLAKII----KLGL--QPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTT 208

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C   +   A  L  +M + G QPNVVT++ I+D   K+ +++EA  +   M   G
Sbjct: 209 IINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKG 268

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD FTYN+L+ G C   +   A  L   M S+     + ++++L++  CK  ++  A 
Sbjct: 269 ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQ 328

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +   M   G++PDVV +++L  G     +V  A KLFD M   G   D ++Y   I+G 
Sbjct: 329 GVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGY 388

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   I EA +LF+ +       +  +YN+LI GLC+ G L  A  LF+++     +PN+
Sbjct: 389 CKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNL 448

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TYSI++ G C  G   KA  LF  M+     PN++ +++LI    +        +L  +
Sbjct: 449 FTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSE 508

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           +    + P+A I + +++ L K  +   +L +F   E+
Sbjct: 509 LFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEE 546


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  354 bits (909), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 181/473 (38%), Positives = 288/473 (60%), Gaps = 7/473 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVF 59
           M R   GF VL    K     + V F +L++GL AE+++ +A  LF KL R   CEP+  
Sbjct: 120 MHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEV 179

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            Y T++NGLC+  HT  A +L   M  G+       +PNT  Y+ +ID  CK+G +D A 
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPNTCIYSIVIDAFCKDGMLDGAT 233

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            LL +MK K+I P++ TY+++I   C    W   + LF+EM+   + PNV TFN ++D L
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK GK+++A  ++  MI+ GV PD  TYN ++DG+ L G+V+ A+E+F SM +   +  +
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNI 353

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY+ILINGY + K+I+ A+ +  E+  KG+KP +V  N L  GLFE+ + + A   FDE
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G   D +T+ T + G  KNG + EA+  FH L   + + +I+ Y ++IDGLCK+G+
Sbjct: 414 MLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGK 473

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A   F  LP   L P+V+TY+ MI G C +G +D+A+D+   ME+N  + +  T+++
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           ++RGF+R N+ S++   L ++   +   +A+ V +++D++A++   LN +P F
Sbjct: 534 IVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEF 586



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 173/402 (43%), Gaps = 76/402 (18%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     F +L  + +    P+   ++ +I   C +  +  A +L  +++     PD+FTY
Sbjct: 192 GHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTY 251

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL++ LC+ S       LF EM + N        PN  T+ ++IDGLCKEG V+ A+E+
Sbjct: 252 STLIDALCKLSQWENVRTLFLEMIHLN------IYPNVCTFNSVIDGLCKEGKVEDAEEI 305

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M +K + P+V+TY  +I G+      + A+ +F  M+++ ++PN++++N++++   +
Sbjct: 306 MRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYAR 365

Query: 182 NGKMDEASRL-----------------------------------LDLMIQHGVRPDAFT 206
             K+DEA ++                                    D M+  G  PD +T
Sbjct: 366 QKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYT 425

Query: 207 YNTLL-----------------------------------DGFCLTGRVNHAKELFVSME 231
           + TLL                                   DG C  G+++ A   F  + 
Sbjct: 426 HCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLP 485

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
            +G    V +Y+ +I+GYC+   ++ A  +  +M   G   D   +N +  G    ++V 
Sbjct: 486 LIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVS 545

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
                 +E+     + +  T    +D + ++  ++  +  FH
Sbjct: 546 EMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFH 587



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 1/274 (0%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A  L   M++    P   +++ LL         +    LF  +  +      F  SI
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           ++N  C     +   S+ +    KGI  + VI NTL  GLF  ++V+ A  LF ++ R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 305 VA-ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           +   +   Y T ++GLCK G+  +A +L   +     + +   Y+ +ID  CK G L+ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             L   +    + P++ TYS +I  LC   Q +  R LFL+M    + PNV TF+ +I G
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +  +     E++  M E  V PD    ++++D
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIID 326



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 36/245 (14%)

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ----------- 301
           K ++ A SL+ +M+     P VV  + L   L  +        LF E+            
Sbjct: 51  KCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFIL 110

Query: 302 ------------------------RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-R 336
                                   + G+  +   + T + GL     + +AV LF  L R
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVR 170

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              CE +   Y ++++GLCK G  + A +L R +  G   PN   YSI+I   C DG +D
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLD 230

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L  +M++ ++ P++ T+  LI    ++++   V  L  +M  +N+ P+    + V+
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290

Query: 457 DLLAK 461
           D L K
Sbjct: 291 DGLCK 295


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  353 bits (907), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 184/462 (39%), Positives = 270/462 (58%), Gaps = 6/462 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV+  F VL +ILK    PD  +FT+LIKGLC E +I EA  LF K+   G +PDV  
Sbjct: 122 LNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVI 181

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+T HT  A+ L   M  GN      C+P+ V Y T+I  LCK+    +A  
Sbjct: 182 YATLINGLCKTGHTSAAIRLLRSMEKGN------CQPDVVVYGTLIHSLCKDRQQTQAFN 235

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I PN+VT  S++   C   +W     L  EM+D  + PN ++   ++D LC
Sbjct: 236 LFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALC 295

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + +A  ++D+M Q GV PD  TY  L+DG CL   ++ A ++F  M   GC   VF
Sbjct: 296 KEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVF 355

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LINGYCK + ++ A+ L+ EM  + + P+ V +NTL  GL  + +++ A  LF EM
Sbjct: 356 SYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREM 415

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D  TYR  +D LCKN ++ +A+ L   +     + DI+ Y  +IDG+C++G L
Sbjct: 416 VACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGEL 475

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +LF +L    L PNV TY+IM  GLC  G +D+A  LF++M+ENA   +  T++ +
Sbjct: 476 EDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTI 535

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +GF+R NE S+ I+LL +M       D S  +++V +L+ +
Sbjct: 536 TQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDD 577



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 183/366 (50%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ V +  I+  + K         L  +M    I  NV T   +I  FC+    N A  +
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  +F  ++  LC  G++ EA  L D MI  G +PD   Y TL++G C 
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           TG  + A  L  SME   C+  V  Y  LI+  CK+++   A +L+SEM++KGI P++V 
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            N+L   L  + + +    L +EM  + +  +  +  T +D LCK G + +A ++   + 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E D+  Y +LIDG C    ++ A+++F  +      PNV +Y+ +I G C   +MD
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  LF +M    ++PN +T++ LI G   +      I L  +M     +PD     I++
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431

Query: 457 DLLAKN 462
           D L KN
Sbjct: 432 DYLCKN 437



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 140/298 (46%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           ++A   F  M+     P++V F  I+  + K  +      L   M   G+  + +T N L
Sbjct: 56  DDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVL 115

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ FC   RVN A  +   +  +GC+    S++ LI G C   +I  AL L+ +M+ +G 
Sbjct: 116 INSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGF 175

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +PDVVI+ TL  GL +      A +L   M++     D   Y T I  LCK+    +A  
Sbjct: 176 QPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFN 235

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           LF  +       +I   NSL+  LC  G  +    L   +    ++PN ++ + ++  LC
Sbjct: 236 LFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALC 295

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +G + +A D+   M ++ V P+V+T+  LI G    +E  + +++   M      P+
Sbjct: 296 KEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPN 353



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 128/273 (46%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + M+     P    +  +L       R +    L   M+S G  H V++ ++
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C    +  A S+ +++L  G +PD     TL  GL    Q+  A  LFD+M   G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D   Y T I+GLCK G+   A+ L  ++    C+ D+  Y +LI  LCK  +   A 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + PN+VT + ++  LCN G+      L  +M ++ ++PN I+   ++   
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +    ++  +++  M +  V PD    + ++D
Sbjct: 295 CKEGMVAQAHDVVDMMFQSGVEPDVVTYTALID 327



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 96/195 (49%), Gaps = 7/195 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +   ++     PD VT+  L+  LC    + +A AL   +     +PD+  
Sbjct: 402 VGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQI 461

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++G+CR      A +LF  +++         +PN  TY  +  GLCK G +D+A +
Sbjct: 462 YTIVIDGMCRAGELEDARDLFSNLSSKG------LKPNVWTYNIMTHGLCKRGLLDEATK 515

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L ++M +     +  TY ++ +GF    + + A +L  EM+ +G   +V T  +++  L 
Sbjct: 516 LFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLS 575

Query: 181 KNG-KMDEASRLLDL 194
            +G    EA +L D+
Sbjct: 576 DDGLDQSEAHKLEDM 590



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 35/248 (14%)

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           Y     ++ ALS ++ ML     P +V    +   + ++ +      L  +M   G+  +
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            +T    I+  C    +  A  +   +  L C+ D  ++ +LI GLC  G++  AL LF 
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDG----------------------------------- 393
            +      P+VV Y+ +I GLC  G                                   
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           Q  +A +LF +M    + PN++T + L+     + E   V  LL++M +  +MP+A  ++
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288

Query: 454 IVVDLLAK 461
            VVD L K
Sbjct: 289 TVVDALCK 296


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  353 bits (906), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 182/464 (39%), Positives = 285/464 (61%), Gaps = 6/464 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +  V     +LG++ K    P A TF +LI GLC E +I EA  LF ++   G EP+V +
Sbjct: 136 LNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVIS 195

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++NGLC+T +T +A+++F++M   NG     C+P+ VTY TIID LCK+  V+ A E
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQ-NG-----CKPDVVTYNTIIDSLCKDRLVNDAME 249

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +M D+ I PNV TY  ++ GFC     NEA RLF EM+ + V P+ VT  +++D LC
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLC 309

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + EA  + + M + GV P+  TYN L+DG+CL   +N AK++F  M   GC   V 
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILING+CK++ ++ A SL +EM  K + PD V ++TL  GL +  + + A  +F EM
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  +  TY   +DG CK+G++ EA++L  +++  K E +I  +  LI+G+  +G+L
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL 489

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E+A ELF  L    + P + TY++MI GL  +G  D+A DLF  ME++  +PN  +++++
Sbjct: 490 EVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVM 549

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           I+GF++  + S  I L+ +M       + S   +++DL +++EI
Sbjct: 550 IQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQDEI 593



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 182/383 (47%), Gaps = 35/383 (9%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D A     +M   N +P+V  +   +  F   K ++    L  +M   GV  NV + NV
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++ LC+   +D A  +L  M + G+ P A T+N L++G C  G++  A ELF  M   G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE-------- 286
            +  V SY+ +ING CK      A+ ++ +M   G KPDVV +NT+   L +        
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 287 ---------------------IH------QVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
                                +H      Q+  A +LF EM    V  DT T    +DGL
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G + EA  +F T+     E +I  YN+L+DG C    +  A ++F  +      P V
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            +Y+I+I G C   +MD+A+ L  +M   A+ P+ +T+  L++G  +   P + + +  +
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M    ++P+    SI++D   K+
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKH 451



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 137/276 (49%)

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N  +D+A      M++   RP    +   L  F    + +    L   M+  G  H V+S
Sbjct: 66  NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            ++LIN  C+   ++ A+S+  +M   GI P     N L  GL    +++ A +LF+EM 
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G   +  +Y T I+GLCK G    AV++F  +    C+ D+  YN++ID LCK   + 
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+E    +    + PNV TY+ M+ G C  GQ+++A  LF +M    V+P+ +T  +L+
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            G  +    S+   +   M E  V P+ S  + ++D
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMD 341


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 179/457 (39%), Positives = 278/457 (60%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++    + P+ VTF +LI GL   ++  EA AL  ++   GC+PD+FTY 
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+VNGLC+     +AL+L ++M  G        E + V YTTIID LC    V+ A  L 
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGK------IEADVVIYTTIIDALCNYKNVNDALNLF 278

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +K I+PNVVTY S+IR  C    W++A RL  +M+++ + PNVVTF+ ++D   K 
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L D MI+  + PD FTY++L++GFC+  R++ AK +F  M S  C   V +Y
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+CK K +E  + L+ EM  +G+  + V +NTL  GLF+    + A K+F +M  
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLCK G + +A+ +F  L+  K E DI  YN +I+G+CK+G++E 
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF SL    + PNV+ Y+ MI G C  G  ++A  LF +M+E+  +PN  T++ LIR
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+    + DAS +S+V+++L
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 231/452 (51%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G +++S   P  V F  L+  +   ++     +L  +++      D+++Y  L+N  C
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R S   +AL +  +M     + G   EP+ VT +++++G C    + +A  L+ QM    
Sbjct: 127 RRSQLPLALAVLGKMM----KLGY--EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +PN VT+ ++I G       +EA  L   M+ +G QP++ T+  +++ LCK G +D A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M +  +  D   Y T++D  C    VN A  LF  M++ G +  V +Y+ LI   
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C       A  L S+M+ + I P+VV  + L     +  ++  A KL+DEM +  +  D 
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +TY + I+G C +  + EA  +F  +    C  ++  YN+LI G CK+ R+E  +ELFR 
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    LV N VTY+ +I GL   G  D A+ +F  M  + V P++IT+ +L+ G  +  +
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             K + +   +++  + PD    +I+++ + K
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 219/424 (51%), Gaps = 6/424 (1%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           ++ +A  LF ++      P +  +  L++ + + +   + ++L E M N    +      
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY------ 113

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           +  +Y  +I+  C+   +  A  +L +M     +P++VT +S++ G+C+ K  +EA  L 
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M     QPN VTFN ++  L  + K  EA  L+D M+  G +PD FTY T+++G C  
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G ++ A  L   ME    +  V  Y+ +I+  C  K +  AL+L++EM +KGI+P+VV +
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N+L   L    +   A +L  +M    +  +  T+   ID   K G +VEA +L+  +  
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              + DI  Y+SLI+G C   RL+ A  +F  +      PNVVTY+ +I G C   ++++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +LF +M +  +V N +T++ LI+G  +  +     ++  KM    V PD    SI++D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473

Query: 458 LLAK 461
            L K
Sbjct: 474 GLCK 477



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 203/397 (51%), Gaps = 7/397 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L ++ K     D V +T++I  LC    + +A  LFT++   G  P+V TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+  LC       A  L  +M            PN VT++ +ID   KEG + +A++L
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERK------INPNVVTFSALIDAFVKEGKLVEAEKL 347

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I P++ TY+S+I GFC     +EAK +F  M+ +   PNVVT+N ++   CK
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++E   L   M Q G+  +  TYNTL+ G    G  + A+++F  M S G    + +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL++G CK  ++E AL ++  +    ++PD+  +N +  G+ +  +VE  + LF  + 
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  +   Y T I G C+ G   EA  LF  ++      +   YN+LI    + G   
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            + EL + +     V +  T S++I  L +DG+++K+
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 177/328 (53%), Gaps = 10/328 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +++    P+ VTF++LI     E +++EA  L+ ++     +PD+FTY
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L+NG C       A ++FE M + +      C PN VTY T+I G CK   V++  EL
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  N VTY ++I+G   A D + A+++F +M+  GV P+++T+++++D LCK
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++A  + + + +  + PD +TYN +++G C  G+V    +LF S+   G K  V  
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G+C+    E A +L+ EM   G  P+   +NTL            + +L  EM+
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597

Query: 302 RNGVAADTWTYRTFI----DGLCKNGYI 325
             G   D  T    I    DG  +  Y+
Sbjct: 598 SCGFVGDASTISMVINMLHDGRLEKSYL 625



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 10/294 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +   ++K    PD  T++SLI G C   R+ EA  +F  +    C P+V TY
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ G C+       + LF EM+    + G+V   NTVTY T+I GL + G  D A+++
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMS----QRGLV--GNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + P+++TY+ ++ G C      +A  +F  +    ++P++ T+N++++ +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++   L   +   GV+P+   Y T++ GFC  G    A  LF  M+  G      +
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDV----VIHNTLFVGLFEIHQVE 291
           Y+ LI    ++ +   +  L  EM S G   D     ++ N L  G  E   +E
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 103/220 (46%)

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ A+ L+ EM+     P +V  N L   + ++++ +    L + MQ   ++ D ++Y 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I+  C+   +  A+ +   +  L  E DI   +SL++G C   R+  A+ L   +   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              PN VT++ +I GL    +  +A  L   M      P++ T+  ++ G  +  +    
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           + LL KM++  +  D  I + ++D L   +   ++L  FT
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFT 279


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 179/457 (39%), Positives = 278/457 (60%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++    + P+ VTF +LI GL   ++  EA AL  ++   GC+PD+FTY 
Sbjct: 149 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 208

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+VNGLC+     +AL+L ++M  G        E + V YTTIID LC    V+ A  L 
Sbjct: 209 TVVNGLCKRGDIDLALSLLKKMEKGK------IEADVVIYTTIIDALCNYKNVNDALNLF 262

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +K I+PNVVTY S+IR  C    W++A RL  +M+++ + PNVVTF+ ++D   K 
Sbjct: 263 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 322

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L D MI+  + PD FTY++L++GFC+  R++ AK +F  M S  C   V +Y
Sbjct: 323 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 382

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+CK K +E  + L+ EM  +G+  + V +NTL  GLF+    + A K+F +M  
Sbjct: 383 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 442

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLCK G + +A+ +F  L+  K E DI  YN +I+G+CK+G++E 
Sbjct: 443 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 502

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF SL    + PNV+ Y+ MI G C  G  ++A  LF +M+E+  +PN  T++ LIR
Sbjct: 503 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 562

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+    + DAS +S+V+++L
Sbjct: 563 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 231/452 (51%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G +++S   P  V F  L+  +   ++     +L  +++      D+++Y  L+N  C
Sbjct: 51  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 110

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R S   +AL +  +M     + G   EP+ VT +++++G C    + +A  L+ QM    
Sbjct: 111 RRSQLPLALAVLGKMM----KLGY--EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +PN VT+ ++I G       +EA  L   M+ +G QP++ T+  +++ LCK G +D A 
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M +  +  D   Y T++D  C    VN A  LF  M++ G +  V +Y+ LI   
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C       A  L S+M+ + I P+VV  + L     +  ++  A KL+DEM +  +  D 
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +TY + I+G C +  + EA  +F  +    C  ++  YN+LI G CK+ R+E  +ELFR 
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 404

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    LV N VTY+ +I GL   G  D A+ +F  M  + V P++IT+ +L+ G  +  +
Sbjct: 405 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 464

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             K + +   +++  + PD    +I+++ + K
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 496



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 219/424 (51%), Gaps = 6/424 (1%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           ++ +A  LF ++      P +  +  L++ + + +   + ++L E M N    +      
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY------ 97

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           +  +Y  +I+  C+   +  A  +L +M     +P++VT +S++ G+C+ K  +EA  L 
Sbjct: 98  DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 157

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M     QPN VTFN ++  L  + K  EA  L+D M+  G +PD FTY T+++G C  
Sbjct: 158 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 217

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G ++ A  L   ME    +  V  Y+ +I+  C  K +  AL+L++EM +KGI+P+VV +
Sbjct: 218 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 277

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N+L   L    +   A +L  +M    +  +  T+   ID   K G +VEA +L+  +  
Sbjct: 278 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 337

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              + DI  Y+SLI+G C   RL+ A  +F  +      PNVVTY+ +I G C   ++++
Sbjct: 338 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 397

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +LF +M +  +V N +T++ LI+G  +  +     ++  KM    V PD    SI++D
Sbjct: 398 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 457

Query: 458 LLAK 461
            L K
Sbjct: 458 GLCK 461



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 203/397 (51%), Gaps = 7/397 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L ++ K     D V +T++I  LC    + +A  LFT++   G  P+V TY
Sbjct: 218 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 277

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+  LC       A  L  +M            PN VT++ +ID   KEG + +A++L
Sbjct: 278 NSLIRCLCNYGRWSDASRLLSDMIERK------INPNVVTFSALIDAFVKEGKLVEAEKL 331

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I P++ TY+S+I GFC     +EAK +F  M+ +   PNVVT+N ++   CK
Sbjct: 332 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 391

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++E   L   M Q G+  +  TYNTL+ G    G  + A+++F  M S G    + +
Sbjct: 392 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 451

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL++G CK  ++E AL ++  +    ++PD+  +N +  G+ +  +VE  + LF  + 
Sbjct: 452 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 511

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  +   Y T I G C+ G   EA  LF  ++      +   YN+LI    + G   
Sbjct: 512 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 571

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            + EL + +     V +  T S++I  L +DG+++K+
Sbjct: 572 ASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 607



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 177/328 (53%), Gaps = 10/328 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +++    P+ VTF++LI     E +++EA  L+ ++     +PD+FTY
Sbjct: 288 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 347

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L+NG C       A ++FE M + +      C PN VTY T+I G CK   V++  EL
Sbjct: 348 SSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNTLIKGFCKAKRVEEGMEL 401

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  N VTY ++I+G   A D + A+++F +M+  GV P+++T+++++D LCK
Sbjct: 402 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 461

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++A  + + + +  + PD +TYN +++G C  G+V    +LF S+   G K  V  
Sbjct: 462 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 521

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G+C+    E A +L+ EM   G  P+   +NTL            + +L  EM+
Sbjct: 522 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 581

Query: 302 RNGVAADTWTYRTFI----DGLCKNGYI 325
             G   D  T    I    DG  +  Y+
Sbjct: 582 SCGFVGDASTISMVINMLHDGRLEKSYL 609



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 10/294 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +   ++K    PD  T++SLI G C   R+ EA  +F  +    C P+V TY
Sbjct: 323 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 382

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ G C+       + LF EM+    + G+V   NTVTY T+I GL + G  D A+++
Sbjct: 383 NTLIKGFCKAKRVEEGMELFREMS----QRGLV--GNTVTYNTLIQGLFQAGDCDMAQKI 436

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + P+++TY+ ++ G C      +A  +F  +    ++P++ T+N++++ +CK
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 496

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++   L   +   GV+P+   Y T++ GFC  G    A  LF  M+  G      +
Sbjct: 497 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 556

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDV----VIHNTLFVGLFEIHQVE 291
           Y+ LI    ++ +   +  L  EM S G   D     ++ N L  G  E   +E
Sbjct: 557 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 610



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 103/220 (46%)

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ A+ L+ EM+     P +V  N L   + ++++ +    L + MQ   ++ D ++Y 
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I+  C+   +  A+ +   +  L  E DI   +SL++G C   R+  A+ L   +   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              PN VT++ +I GL    +  +A  L   M      P++ T+  ++ G  +  +    
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           + LL KM++  +  D  I + ++D L   +   ++L  FT
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFT 263


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  352 bits (903), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 177/448 (39%), Positives = 270/448 (60%), Gaps = 6/448 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M  V  GF VL +++K    P  +TFT+LI GLC      +A  LF  +   GC+PDV+T
Sbjct: 139 MQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYT 198

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT++NGLC+   T  A  L ++M    GE G  C+P+ VTY+T+ID LCK+  V++A +
Sbjct: 199 YTTIINGLCKMGETAAAAGLIKKM----GEVG--CQPDVVTYSTLIDSLCKDRLVNEALD 252

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   MK K I P VV+YTS+I+G C    W EA  +  EM    + P++VTF++++D  C
Sbjct: 253 IFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFC 312

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + EA  +L  M + GV P+  TYN+L+ G+ L   V  A++LF  M + GCK  VF
Sbjct: 313 KEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVF 372

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYSILINGYC  K I+ A  L++EM+ +G+ P+ V + TL     ++ ++  A +LF +M
Sbjct: 373 SYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDM 432

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D  TY   ++G CK GY+ +A  LF  ++    + ++  Y  LID +CKSG L
Sbjct: 433 HTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNL 492

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A +LF  L    L P+V  Y+ +I GLC +G +D+A + F  MEE+   PN  +++++
Sbjct: 493 NHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVI 552

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD 448
           IRGF++  + S+ ++L+ +M++   + D
Sbjct: 553 IRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 229/458 (50%), Gaps = 7/458 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P  + F  L+  +    +  +A  +L  ++ + G  P+  T   L+N  C   H  +  +
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  ++     + G+  +P  +T+TT+I+GLCK G   +A EL   M  +  +P+V TYT+
Sbjct: 148 VLAKVI----KLGL--QPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTT 201

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C   +   A  L  +M + G QP+VVT++ ++D LCK+  ++EA  +   M   G
Sbjct: 202 IINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKG 261

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P   +Y +L+ G C   R   A  +   M S+     + ++S+LI+ +CK   +  A 
Sbjct: 262 ISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQ 321

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +   M   G++P+V+ +N+L  G     +V  A KLFD M   G   D ++Y   I+G 
Sbjct: 322 GVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGY 381

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C    I EA +LF+ +       +  +Y +LI   C+ G+L  A ELF+ +     +P++
Sbjct: 382 CMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDL 441

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TYS+++ G C  G + KA  LF  M+   + PN++ + +LI    +    +   +L  +
Sbjct: 442 CTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSE 501

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           +    + PD  I + +++ L K  +   +L +F   E+
Sbjct: 502 LFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEE 539



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 152/291 (52%), Gaps = 6/291 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTF+ LI   C E  ++EA  +   +   G EP+V TY +L++G       + A  L
Sbjct: 299 PDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKL 358

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+ M          C+P+  +Y+ +I+G C    +D+AK+L  +M  + + PN V+YT++
Sbjct: 359 FDVMITRG------CKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTL 412

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I  FC      EA+ LF +M   G  P++ T++V+++  CK G + +A RL   M    +
Sbjct: 413 IHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYL 472

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P+   Y  L+D  C +G +NHA++LF  +   G +  V  Y+ +ING CK   ++ AL 
Sbjct: 473 KPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALE 532

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            + +M   G  P+   +N +  G  +     RA +L  EM+  G  AD  T
Sbjct: 533 AFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  352 bits (902), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 182/458 (39%), Positives = 282/458 (61%), Gaps = 6/458 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F VLG + K    P+ VTF++L+ GL ++++I++A  LF ++   G EPDV TY+T++N
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GLC+   T +A+ L ++M          C+PN V Y+TIID LCK+  + +A E L +M 
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKG------CKPNVVVYSTIIDSLCKDKLITEAMEFLSEMV 144

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++ I PNVVTY+S++ GFC     NEA  LF +M+++ V P+ VTFN+++D L K G + 
Sbjct: 145 NRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMIL 204

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA  + + MI+ GV P+  TYN L+DG+C   +++ A++LF  M   GC  +V SY+ILI
Sbjct: 205 EAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILI 264

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G+CK+  I+ A  L +EM  K + PD V ++TL  G  +  + + A KL +EM+  G+ 
Sbjct: 265 KGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLL 324

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D  TY   +DGLCK G++ EA EL   ++  K E +I  Y  LI G+C  G+LE A EL
Sbjct: 325 PDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAREL 384

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F +L    + P+VVTY++MI GL   G  ++A +LF DM  +  +PN  T++++I+GF+R
Sbjct: 385 FSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLR 444

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             + S    L+ +M       D+S   ++ DL +++EI
Sbjct: 445 NGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESRDEI 482



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/340 (34%), Positives = 191/340 (56%), Gaps = 2/340 (0%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAK--DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           M   NI+P+V T T +I  FC++    ++ A  +   M   G+QPN VTF+ +++ L   
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K+ +A +L D M++ G  PD  TY+T+++G C  G    A +L   ME  GCK  V  Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S +I+  CK+K I  A+   SEM+++GI P+VV ++++  G   + +   A  LF +M  
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             V  DT T+   +DGL K G I+EA  +F T+     E ++  YN+L+DG C   +++ 
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A +LF  +      P+V +Y+I+I G C  G++D+A+ L  +M   A+ P+ +T+  L++
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           GF +   P    +LL +M+   ++PD    SIV+D L K 
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQ 340



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 196/358 (54%), Gaps = 6/358 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG  +    +L ++ +    P+ V ++++I  LC +  I EA    +++   G  P+V T
Sbjct: 95  MGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVT 154

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+++++G C    +  A +LF++M   N        P+TVT+  ++DGL KEG + +A+ 
Sbjct: 155 YSSILHGFCNLGRSNEATSLFKQMVERN------VMPDTVTFNILVDGLSKEGMILEAQC 208

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M +K ++PNV TY +++ G+C     +EA++LF  M+ +G  P+V ++N+++   C
Sbjct: 209 VFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHC 268

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G++DEA  LL  M    + PD  TY+TL+ GFC  GR   A++L   M S G    + 
Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLM 328

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YSI+++G CK   ++ A  L   M    I+P++ I+  L  G+    ++E A +LF  +
Sbjct: 329 TYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNL 388

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
              G+  D  TY   I GL K G   EA ELF  + +  C  +   YN +I G  ++G
Sbjct: 389 FVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNG 446



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 168/322 (52%), Gaps = 16/322 (4%)

Query: 6   HGFVVLGR----------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HGF  LGR          +++    PD VTF  L+ GL  E  I+EA  +F  +   G E
Sbjct: 160 HGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVE 219

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V TY  L++G C  S    A  LF  M          C P+  +Y  +I G CK G +
Sbjct: 220 PNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG------CAPSVRSYNILIKGHCKSGRI 273

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+AK LL +M  K + P+ VTY+++++GFC      +A++L  EM   G+ P+++T++++
Sbjct: 274 DEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D LCK G +DEA  LL  M +  + P+ F Y  L+ G C  G++  A+ELF ++   G 
Sbjct: 334 LDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGI 393

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V +Y+++I+G  K      A  L+ +M   G  P+   +N +  G         A +
Sbjct: 394 QPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGR 453

Query: 296 LFDEMQRNGVAADTWTYRTFID 317
           L +EM   G +AD+ T++   D
Sbjct: 454 LIEEMVGRGFSADSSTFQMLSD 475



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 111/211 (52%), Gaps = 6/211 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  +     TPD VT+++L+KG C + R  +A  L  ++R +G  PD+ TY
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTY 330

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + +++GLC+  H   A  L + M           EPN   YT +I G+C  G ++ A+EL
Sbjct: 331 SIVLDGLCKQGHLDEAFELLKAMQESK------IEPNIFIYTILIQGMCNFGKLEAAREL 384

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K I+P+VVTYT +I G       NEA  LF +M   G  PN  T+NVI+    +
Sbjct: 385 FSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLR 444

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           NG    A RL++ M+  G   D+ T+  L D
Sbjct: 445 NGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  352 bits (902), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 173/462 (37%), Positives = 275/462 (59%), Gaps = 6/462 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +    + VLG+++K  + PD  TF +LIKGL  E ++ EA  L  ++   GC+PDV TY 
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           ++VNG+CR+  T +AL+L  +M   N       + +  TY+TIID LC++G +D A  L 
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K IK +VVTY S++RG C A  WN+   L  +M+ + + PNV+TFNV++D   K 
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA+ L   MI  G+ P+  TYNTL+DG+C+  R++ A  +   M    C   + ++
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI GYC  K ++  + ++  +  +G+  + V ++ L  G  +  +++ A +LF EM  
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLC NG + +A+E+F  L+  K +  I  Y ++I+G+CK G++E 
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  LF SLPC  + PNV+TY++MI GLC  G + +A  L   MEE+   PN  T++ LIR
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             +R  + +   +L+ +MK      DAS + +V+D+L   E+
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGEL 593



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 232/420 (55%), Gaps = 6/420 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+VS   V++ R++++   PD VT+ S++ G+C       A  L  K+     + DVFTY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +T+++ LCR      A++LF+EM       G+  + + VTY +++ GLCK G  +    L
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETK----GI--KSSVVTYNSLVRGLCKAGKWNDGALL 285

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  + I PNV+T+  ++  F       EA  L+ EM+ +G+ PN++T+N +MD  C 
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA+ +LDLM+++   PD  T+ +L+ G+C+  RV+   ++F ++   G      +
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL+ G+C++ +I+ A  L+ EM+S G+ PDV+ +  L  GL +  ++E+A ++F+++Q
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++ +      Y T I+G+CK G + +A  LF +L     + ++  Y  +I GLCK G L 
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L R +      PN  TY+ +I     DG +  +  L  +M+      +  +  M+I
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 174/350 (49%), Gaps = 4/350 (1%)

Query: 111 KEGFVDKAKE----LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           + G VD  K+    L  +M      P++V ++         K +N       ++   G+ 
Sbjct: 61  RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
            N+ T N++++  C+  K   A  +L  +++ G  PD  T+NTL+ G  L G+V+ A  L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              M   GC+  V +Y+ ++NG C++ +   AL L  +M  + +K DV  ++T+   L  
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              ++ A  LF EM+  G+ +   TY + + GLCK G   +   L   +   +   ++  
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           +N L+D   K G+L+ A EL++ +    + PN++TY+ ++ G C   ++ +A ++   M 
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            N   P+++TF  LI+G+  +      +++   + +  ++ +A   SI+V
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 145/289 (50%), Gaps = 4/289 (1%)

Query: 173 NVIMDELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           NV   E  ++G    K D+A  L   MI+    P    ++        T + N   +   
Sbjct: 53  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            +E  G  H +++ +I+IN +C+  +   A S+  +++  G +PD    NTL  GLF   
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           +V  A  L D M  NG   D  TY + ++G+C++G    A++L   +     + D+  Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           ++ID LC+ G ++ A+ LF+ +    +  +VVTY+ ++ GLC  G+ +    L  DM   
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +VPNVITF++L+  F++  +  +  EL  +M    + P+    + ++D
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  352 bits (902), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 177/457 (38%), Positives = 279/457 (61%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD VTF +LI GL   ++  EA AL  ++   GC+PD+FTY 
Sbjct: 166 RISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 225

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+VNGLC+     +AL+L ++M  G        E N V Y TIIDGLCK   +D A +L 
Sbjct: 226 TVVNGLCKRGDIDLALSLLKKMEKGK------IEANVVIYNTIIDGLCKYKHMDDAFDLF 279

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K IKP+V TY S+I   C    W++A RL  +M+++ + PNVVTFN ++D   K 
Sbjct: 280 NKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKE 339

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L D MIQ  + P+  TYN+L++GFC+  R++ A+++F  M S  C   V +Y
Sbjct: 340 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 399

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+CK K +E  + L+ EM  +G+  + V +NTL  GLF+    + A K+F +M  
Sbjct: 400 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 459

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLCK G + +A+ +F  L+  K E +I  YN +I+G+CK+G++E 
Sbjct: 460 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF SL    + PNV+ Y+ MI G C  G  ++A  LF +M+E+  +P+   ++ LIR
Sbjct: 520 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 579

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+    + DAS +S+V+++L
Sbjct: 580 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 242/459 (52%), Gaps = 6/459 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++     + G ++KS   P  + F+ L+  +   ++     +L  +++  G   + +TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+N  CR S   +AL +  +M     + G   EP+ VT +++++G C    + +A  L+
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMM----KLGY--EPDIVTLSSLLNGYCHGKRISEAVALV 174

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM +   KP+ VT+ ++I G       +EA  L   M+ +G QP++ T+  +++ LCK 
Sbjct: 175 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 234

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +D A  LL  M +  +  +   YNT++DG C    ++ A +LF  ME+ G K  VF+Y
Sbjct: 235 GDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 294

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+  C       A  L S+M+ + I P+VV  N+L     +  ++  A KLFDEM +
Sbjct: 295 NSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 354

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  +  TY + I+G C +  + EA ++F  +    C  D+  YN+LI G CK+ R+E 
Sbjct: 355 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEE 414

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            +ELFR +    LV N VTY+ +I GL   G  D A+ +F  M  + V P++IT+ +L+ 
Sbjct: 415 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 474

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           G  +  +  K + +   +++  + P+    +I+++ + K
Sbjct: 475 GLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCK 513



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 232/427 (54%), Gaps = 6/427 (1%)

Query: 35  AESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
           +E ++ +A ALF ++      P +  ++ L++ + + +   V ++L E+M N     G+ 
Sbjct: 58  SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI- 112

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
              N  TY+ +++  C+   +  A  +L +M     +P++VT +S++ G+C+ K  +EA 
Sbjct: 113 -PHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 171

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  +M++ G +P+ VTFN ++  L  + K  EA  L+D M+  G +PD FTY T+++G 
Sbjct: 172 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 231

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G ++ A  L   ME    +  V  Y+ +I+G CK K ++ A  L+++M +KGIKPDV
Sbjct: 232 CKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 291

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +N+L   L    +   A +L  +M    +  +  T+ + ID   K G ++EA +LF  
Sbjct: 292 FTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 351

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     + +I  YNSLI+G C   RL+ A ++F  +     +P+VVTY+ +I G C   +
Sbjct: 352 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +++  +LF +M +  +V N +T++ LI+G  +  +     ++  KM    V PD    SI
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471

Query: 455 VVDLLAK 461
           ++D L K
Sbjct: 472 LLDGLCK 478



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 206/397 (51%), Gaps = 7/397 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L ++ K     + V + ++I GLC    + +A  LF K+   G +PDVFTY
Sbjct: 235 GDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 294

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++ LC       A  L  +M            PN VT+ ++ID   KEG + +A++L
Sbjct: 295 NSLISCLCNYGRWSDASRLLSDMIERK------INPNVVTFNSLIDAFAKEGKLIEAEKL 348

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I PN+VTY S+I GFC     +EA+++F  M+ +   P+VVT+N ++   CK
Sbjct: 349 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCK 408

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++E   L   M Q G+  +  TYNTL+ G    G  + A+++F  M S G    + +
Sbjct: 409 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 468

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL++G CK  ++E AL ++  +    ++P++  +N +  G+ +  +VE  + LF  + 
Sbjct: 469 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  +   Y T I G C+ G   EA  LF  ++      D   YN+LI    + G   
Sbjct: 529 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKA 588

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            + EL + +     V +  T S++I  L +DG+++K+
Sbjct: 589 ASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 624



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 172/328 (52%), Gaps = 10/328 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +++    P+ VTF SLI     E +++EA  LF ++     +P++ TY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 364

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NG C       A  +F  M + +      C P+ VTY T+I G CK   V++  EL
Sbjct: 365 NSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDVVTYNTLIKGFCKAKRVEEGMEL 418

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  N VTY ++I+G   A D + A+++F +M+  GV P+++T+++++D LCK
Sbjct: 419 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 478

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++A  + + + +  + P+ +TYN +++G C  G+V    +LF S+   G K  V  
Sbjct: 479 YGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 538

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G+C+    E A +L+ EM   G  PD   +NTL            + +L  EM+
Sbjct: 539 YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMR 598

Query: 302 RNGVAADTWTYRTFI----DGLCKNGYI 325
             G   D  T    I    DG  +  Y+
Sbjct: 599 SCGFVGDASTISMVINMLHDGRLEKSYL 626



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 146/294 (49%), Gaps = 10/294 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +   +++    P+ VT+ SLI G C   R+ EA  +FT +    C PDV TY
Sbjct: 340 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 399

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ G C+       + LF EM+    + G+V   NTVTY T+I GL + G  D A+++
Sbjct: 400 NTLIKGFCKAKRVEEGMELFREMS----QRGLV--GNTVTYNTLIQGLFQAGDCDMAQKI 453

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + P+++TY+ ++ G C      +A  +F  +    ++PN+ T+N++++ +CK
Sbjct: 454 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCK 513

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++   L   +   GV+P+   Y T++ GFC  G    A  LF  M+  G       
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 573

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDV----VIHNTLFVGLFEIHQVE 291
           Y+ LI    ++ +   +  L  EM S G   D     ++ N L  G  E   +E
Sbjct: 574 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 627


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  351 bits (901), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 183/440 (41%), Positives = 262/440 (59%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F VL +ILK    PD  TFT+LI+GLC E +I EA  LF K+   G +P+V T
Sbjct: 113 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 172

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+  +T  A+ L   M  GN      C+P+ V YT+IID LCK+  V +A  
Sbjct: 173 YGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVVIYTSIIDSLCKDRQVTEAFN 226

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  QM  + I P++ TYTS++   C   +W     L  +M++  + P+VV F+ ++D LC
Sbjct: 227 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 286

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  ++D+MIQ GV PD  TY TL+DG CL   ++ A ++F  M   G    V 
Sbjct: 287 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 346

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LINGYCK  +I+ A+ L+ EM  K   PD   +NTL  GL  + +++ A  LF EM
Sbjct: 347 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEM 406

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D  TY   +D LCKN ++ EA+ L   +       DI+ YN +IDG+C++G L
Sbjct: 407 VARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 466

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +LF +L    L P+V TY+IMI GLC  G +++A  LF++M+ N   P+  T++ +
Sbjct: 467 EAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTI 526

Query: 421 IRGFIRINEPSKVIELLHKM 440
            RGF++ NE  + I+LL +M
Sbjct: 527 ARGFLQNNETLRAIQLLEEM 546



 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 246/449 (54%), Gaps = 6/449 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T   LI   C  +R+  A ++  K+   G +PD  T+TTL+ GLC       AL+L
Sbjct: 98  PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL 157

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F++M +         +PN VTY T+I+GLCK G    A  LL  M+  N +P+VV YTS+
Sbjct: 158 FDKMIDEG------FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSI 211

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  +   EA  LF +M+ QG+ P++ T+  ++  LC   +    + LL+ M+   +
Sbjct: 212 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 271

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD   ++T++D  C  G+V  A E+   M   G +  V +Y+ L++G+C   E++ A+ 
Sbjct: 272 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 331

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++  M+ KG  PDV+ + TL  G  +IH++++A  LF+EM R     DT TY T + GLC
Sbjct: 332 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLC 391

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G + +A+ LFH +       D+  Y+ L+D LCK+  LE A+ L +++    L P++ 
Sbjct: 392 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQ 451

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+I+I G+C  G+++ ARDLF ++    + P+V T++++I G  +    ++  +L  +M
Sbjct: 452 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSL 469
              +  PD    + +     +N  +L ++
Sbjct: 512 DGNDCSPDGCTYNTIARGFLQNNETLRAI 540



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 184/366 (50%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ V +  ++  + K         L  QM    + PNV T   +I  FC+      A  +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TF  ++  LC  GK+ EA  L D MI  G +P+  TY TL++G C 
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SME   C+  V  Y+ +I+  CK++++  A +L+S+M+ +GI PD+  
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +L   L  + + +    L ++M  + +  D   + T +D LCK G + EA E+   + 
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E D+  Y +L+DG C    ++ A+++F  +      P+V++Y+ +I G C   ++D
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  LF +M     +P+  T++ L+ G   +      I L H+M     MPD    SI++
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 457 DLLAKN 462
           D L KN
Sbjct: 423 DSLCKN 428



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 157/338 (46%), Gaps = 43/338 (12%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ---HGVRPDAFTY 207
           ++A   F  ++     P++V F  ++  + K   M   S +L L  Q    GV P+ +T 
Sbjct: 47  DDALSSFNRLLHMHPPPSIVDFAKLLTSIAK---MKHYSTVLSLSTQMDSFGVPPNVYTL 103

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L++ FC   RV  A  +   +  +G +    +++ LI G C   +I  AL L+ +M+ 
Sbjct: 104 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 163

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G +P+VV + TL  GL ++     A +L   M++     D   Y + ID LCK+  + E
Sbjct: 164 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 223

Query: 328 AVELF-------------------HTLRILKCEF-----------------DIRAYNSLI 351
           A  LF                   H L  L CE+                 D+  +++++
Sbjct: 224 AFNLFSQMVGQGISPDIFTYTSLVHALCNL-CEWKHVTTLLNQMVNSKILPDVVIFSTVV 282

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           D LCK G++  A E+   +    + P+VVTY+ ++ G C   +MD+A  +F  M      
Sbjct: 283 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 342

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           P+VI++  LI G+ +I++  K + L  +M     +PD 
Sbjct: 343 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 380



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 127/273 (46%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + ++     P    +  LL         +    L   M+S G    V++ +I
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C    +  A S+ +++L  G +PD     TL  GL    ++  A  LFD+M   G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY T I+GLCK G    A+ L  ++    C+ D+  Y S+ID LCK  ++  A 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ ++  LCN  +      L   M  + ++P+V+ F  ++   
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +  + ++  E++  M +  V PD    + ++D
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 318



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 35/242 (14%)

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           ++ ALS ++ +L     P +V    L   + ++        L  +M   GV  + +T   
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I+  C    +  A  +   +  L  + D   + +LI GLC  G++  AL LF  +    
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 375 LVPNVVTYSIMIGG-----------------------------------LCNDGQMDKAR 399
             PNVVTY  +I G                                   LC D Q+ +A 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +LF  M    + P++ T+  L+     + E   V  LL++M    ++PD  I S VVD L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 460 AK 461
            K
Sbjct: 286 CK 287


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  351 bits (901), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 172/453 (37%), Positives = 272/453 (60%), Gaps = 6/453 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            + VLG+++K  + PD  TF +LIKGL  E ++ EA  L  ++   GC+PDV TY ++VN
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G+CR+  T +AL+L  +M   N       + +  TY+TIID LC++G +D A  L  +M+
Sbjct: 192 GICRSGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEME 245

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            K IK +VVTY S++RG C A  WN+   L  +M+ + + PNV+TFNV++D   K GK+ 
Sbjct: 246 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 305

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA+ L   MI  G+ P+  TYNTL+DG+C+  R++ A  +   M    C   + +++ LI
Sbjct: 306 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            GYC  K ++  + ++  +  +G+  + V ++ L  G  +  +++ A +LF EM  +GV 
Sbjct: 366 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 425

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D  TY   +DGLC NG + +A+E+F  L+  K +  I  Y ++I+G+CK G++E A  L
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F SLPC  + PNV+TY++MI GLC  G + +A  L   MEE+   PN  T++ LIR  +R
Sbjct: 486 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 545

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             + +   +L+ +MK      DAS + +V+D+L
Sbjct: 546 DGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 232/420 (55%), Gaps = 6/420 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+VS   V++ R++++   PD VT+ S++ G+C       A  L  K+     + DVFTY
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 221

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +T+++ LCR      A++LF+EM       G+  + + VTY +++ GLCK G  +    L
Sbjct: 222 STIIDSLCRDGCIDAAISLFKEMETK----GI--KSSVVTYNSLVRGLCKAGKWNDGALL 275

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  + I PNV+T+  ++  F       EA  L+ EM+ +G+ PN++T+N +MD  C 
Sbjct: 276 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 335

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA+ +LDLM+++   PD  T+ +L+ G+C+  RV+   ++F ++   G      +
Sbjct: 336 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 395

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL+ G+C++ +I+ A  L+ EM+S G+ PDV+ +  L  GL +  ++E+A ++F+++Q
Sbjct: 396 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 455

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++ +      Y T I+G+CK G + +A  LF +L     + ++  Y  +I GLCK G L 
Sbjct: 456 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 515

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L R +      PN  TY+ +I     DG +  +  L  +M+      +  +  M+I
Sbjct: 516 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 236/448 (52%), Gaps = 6/448 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++S   P  V F+     +    +         +L + G   +++T   ++N  CR   
Sbjct: 69  MIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCK 128

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
           T  A ++  ++     + G   EP+T T+ T+I GL  EG V +A  L+ +M +   +P+
Sbjct: 129 TCFAYSVLGKVM----KLGY--EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPD 182

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVTY S++ G C + D + A  L  +M ++ V+ +V T++ I+D LC++G +D A  L  
Sbjct: 183 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 242

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G++    TYN+L+ G C  G+ N    L   M S      V ++++L++ + K  
Sbjct: 243 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 302

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ A  LY EM+++GI P+++ +NTL  G    +++  A  + D M RN  + D  T+ 
Sbjct: 303 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 362

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I G C    + + +++F  +       +   Y+ L+ G C+SG++++A ELF+ +   
Sbjct: 363 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 422

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            ++P+V+TY I++ GLC++G+++KA ++F D++++ +   ++ +  +I G  +  +    
Sbjct: 423 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 482

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
             L   +    V P+    ++++  L K
Sbjct: 483 WNLFCSLPCKGVKPNVMTYTVMISGLCK 510



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 191/386 (49%), Gaps = 6/386 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A+ LF+EM            P+ V ++     + +    +   +   Q++   I  N+ T
Sbjct: 62  AIALFQEMIRSRPL------PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 115

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
              +I  FC       A  +  ++M  G +P+  TFN ++  L   GK+ EA  L+D M+
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           ++G +PD  TYN++++G C +G  + A +L   ME    K  VF+YS +I+  C++  I+
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+SL+ EM +KGIK  VV +N+L  GL +  +      L  +M    +  +  T+   +
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D   K G + EA EL+  +       +I  YN+L+DG C   RL  A  +   +      
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 355

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P++VT++ +I G C   ++D    +F ++ +  +V N +T+ +L++GF +  +     EL
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
             +M    V+PD     I++D L  N
Sbjct: 416 FQEMVSHGVLPDVMTYGILLDGLCDN 441



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 174/350 (49%), Gaps = 4/350 (1%)

Query: 111 KEGFVDKAKE----LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           + G VD  K+    L  +M      P++V ++         K +N       ++   G+ 
Sbjct: 51  RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 110

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
            N+ T N++++  C+  K   A  +L  +++ G  PD  T+NTL+ G  L G+V+ A  L
Sbjct: 111 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 170

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              M   GC+  V +Y+ ++NG C++ +   AL L  +M  + +K DV  ++T+   L  
Sbjct: 171 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 230

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              ++ A  LF EM+  G+ +   TY + + GLCK G   +   L   +   +   ++  
Sbjct: 231 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 290

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           +N L+D   K G+L+ A EL++ +    + PN++TY+ ++ G C   ++ +A ++   M 
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 350

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            N   P+++TF  LI+G+  +      +++   + +  ++ +A   SI+V
Sbjct: 351 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 400



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 145/289 (50%), Gaps = 4/289 (1%)

Query: 173 NVIMDELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           NV   E  ++G    K D+A  L   MI+    P    ++        T + N   +   
Sbjct: 43  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 102

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            +E  G  H +++ +I+IN +C+  +   A S+  +++  G +PD    NTL  GLF   
Sbjct: 103 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 162

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           +V  A  L D M  NG   D  TY + ++G+C++G    A++L   +     + D+  Y+
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           ++ID LC+ G ++ A+ LF+ +    +  +VVTY+ ++ GLC  G+ +    L  DM   
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +VPNVITF++L+  F++  +  +  EL  +M    + P+    + ++D
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 331



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 178/427 (41%), Gaps = 65/427 (15%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV  G  V   I K     +AVT++ L++G C   +I  A  LF ++   G  PDV TY 
Sbjct: 373 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 432

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVV---------------------------- 94
            L++GLC       AL +FE++     + G+V                            
Sbjct: 433 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 492

Query: 95  -CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
             +PN +TYT +I GLCK+G + +A  LL +M++    PN  TY ++IR      D   +
Sbjct: 493 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 552

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDEL-----------CKNGKMDEASRLLDLMIQHGVRP 202
            +L  EM   G   +  +  +++D L           C +        LL+L     +R 
Sbjct: 553 AKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRL 612

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV--FSYSILINGYCKNKEIEGALS 260
            + T+  +     +T  +N        M S      +     S ++  + KN+++   + 
Sbjct: 613 SSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKF-KNRDVR--VL 669

Query: 261 LYSEMLSKGIK------------PDVVIHNTLFVGLFE----IHQVERAFKLFDEMQRNG 304
           + +E+L+ G++            P   +H     G          V  A +L  EM + G
Sbjct: 670 VTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRG 729

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +A +T TY + IDG CK   + EA ++   L + K + DIR    L+ GL +  R     
Sbjct: 730 IAPNTITYSSLIDGFCKENRLDEANQMLD-LMVTKGDSDIRY---LLAGLMRKKRKGSET 785

Query: 365 ELFRSLP 371
           E + +LP
Sbjct: 786 EGWENLP 792



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%)

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  L   MIQ G+ P+  TY++L+DGFC   R++ A ++   M + G     +  + L+ 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMR 777

Query: 248 GYCKNKEIEGALSLYSEM 265
              K  E EG  +L  ++
Sbjct: 778 KKRKGSETEGWENLPDDL 795


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  350 bits (899), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 181/453 (39%), Positives = 271/453 (59%), Gaps = 6/453 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV  GF VL + +K    P  VTFT+LI GL    +  +A  LF  +   GC+PD +T
Sbjct: 23  LQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYT 82

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT++NGLC+   T +A  LF++M          C+ N VTY+T+I  LCK   V++A +
Sbjct: 83  YTTIINGLCKIGETALAAGLFKKMEEAG------CQLNVVTYSTLIHSLCKYRRVNEALD 136

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   MK K+I P + TYTS+I+G C    W EA  L  EM    + PNVVTFNV++D  C
Sbjct: 137 IFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFC 196

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+  A  +L  M + GV PD  TYN+L+ G+ +   V  A++LF  M + GCK  VF
Sbjct: 197 KEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVF 256

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYSILINGYCK K I+ A  L++EM+ +G  P+ V +NTL  GL ++ ++  A  LF  M
Sbjct: 257 SYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNM 316

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   + +TY   +DG CK GY+ +A  LF  ++    + ++  YN L++ +CKSG L
Sbjct: 317 HTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNL 376

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ELF  L    L PNV  Y+ +I GLC +G +D+A + F +ME++   P+  +++++
Sbjct: 377 KDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVI 436

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           IRGF++  + S+ + L+ +M++   + DA   +
Sbjct: 437 IRGFLQHKDESRAVHLIGEMRDRGFITDAGTTA 469



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 217/424 (51%), Gaps = 6/424 (1%)

Query: 49  LRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG 108
           + + G  P+  T   L+N  C+     +    F  +A G     +  +P  VT+TT+I+G
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLG---FSVLAKG---IKLGLQPTIVTFTTLING 54

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           L K G   +A EL   M  +  +P+  TYT++I G C   +   A  LF +M + G Q N
Sbjct: 55  LGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLN 114

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           VVT++ ++  LCK  +++EA  +   M    + P  FTY +L+ G C   R   A  L  
Sbjct: 115 VVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLN 174

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M S+     V ++++L++ +CK  ++  A  +   M   G++PDVV +N+L  G     
Sbjct: 175 EMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWT 234

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           +V  A KLFD M   G   D ++Y   I+G CK   I EA +LF+ +       +  +YN
Sbjct: 235 EVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYN 294

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +LI GLC+ GRL  A +LF+++     +PN+ TY+I++ G C  G + KA  LF  M+  
Sbjct: 295 TLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQST 354

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
            + PN++ +++L+    +        EL  ++  I + P+  I + +++ L K  +   +
Sbjct: 355 YLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEA 414

Query: 469 LPSF 472
           L +F
Sbjct: 415 LEAF 418


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  350 bits (899), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 180/464 (38%), Positives = 274/464 (59%), Gaps = 6/464 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R    F VL +ILK    PD  TFT+LI+GLC E +I +A  LF K+   G +P+V T
Sbjct: 115 LNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT 174

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+  +T  A+ L   M  GN      C+P+ V YT+IID LCK+  V +A  
Sbjct: 175 YGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVVVYTSIIDSLCKDRQVTEAFN 228

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P++ TYTS+I   C   +W     L  +M++  + P+VV F+ ++D LC
Sbjct: 229 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC 288

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  ++D+MI  GV P+  TYN L+DG CL   ++ A ++F +M   G    V 
Sbjct: 289 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 348

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LINGYCK + ++ A  L+ EM  K + P+ V +NTL  GL  + +++ A  LF EM
Sbjct: 349 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEM 408

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G   D  TYR  +D LCK  ++ EA+ L  T+     + DI+ Y  +IDG+C++G L
Sbjct: 409 VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGEL 468

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A ++F +L    L PNV TY+IMI GLC  G +D+A  LF++M+ N   P+  T++ +
Sbjct: 469 EAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTI 528

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
            +G ++  E  + I+LL +M       D S  +++V++L  +++
Sbjct: 529 TQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKL 572



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 243/449 (54%), Gaps = 6/449 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T   LI   C  +R   A ++  K+   G +PD  T+TTL+ GLC       AL+L
Sbjct: 100 PDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHL 159

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F++M       G   +PN VTY T+I+GLCK G  + A  LL  M+  N +P+VV YTS+
Sbjct: 160 FDKM------IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSI 213

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  +   EA  LF +M+ QG+ P++ T+  ++  LC   +    + LL+ MI   +
Sbjct: 214 IDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI 273

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD   ++T++D  C  G++  A ++   M   G +  V +Y+ L++G+C   E++ A+ 
Sbjct: 274 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVK 333

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++  M+  G  P+V+ +NTL  G  +I ++++A  LF+EM +  +  +T TY T + GLC
Sbjct: 334 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLC 393

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G + +A+ LFH +       D+  Y  L+D LCK   L+ A+ L +++    + P++ 
Sbjct: 394 HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 453

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+I+I G+C  G+++ ARD+F ++    + PNV T+ ++I G  R     +  +L  +M
Sbjct: 454 IYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 513

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSL 469
                 PD    + +   L +N+ +L ++
Sbjct: 514 DGNGCSPDGCTYNTITQGLLQNKEALRAI 542



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 191/365 (52%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TV +  ++  + K         L  QM    I P+V T   +I  FC+      A  +
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G+QP+  TF  ++  LC  GK+ +A  L D MI  G +P+  TY TL++G C 
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  N A  L  SME   C+  V  Y+ +I+  CK++++  A +L+S+M+ +GI PD+  
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +L   L  + + +    L ++M  + +  D   + T +D LCK G I EA ++   + 
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
           I   E ++  YN+L+DG C    ++ A+++F ++      PNV++Y+ +I G C   +MD
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  LF +M +  ++PN +T++ L+ G   +      I L H+M     +PD +   I++
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424

Query: 457 DLLAK 461
           D L K
Sbjct: 425 DYLCK 429



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 134/255 (52%), Gaps = 6/255 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   ++ + + P+ +++ +LI G C   R+ +A  LF ++      P+  TY TL++GLC
Sbjct: 334 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLC 393

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  A+ LF EM   +G+      P+  TY  ++D LCK+  +D+A  LL  ++  N
Sbjct: 394 HVGRLQDAIALFHEMV-AHGQI-----PDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 447

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P++  YT VI G C A +   A+ +F  +  +G++PNV T+ ++++ LC+ G +DEA+
Sbjct: 448 MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 507

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           +L   M  +G  PD  TYNT+  G         A +L   M + G    V + ++L+   
Sbjct: 508 KLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 567

Query: 250 CKNKEIEGALSLYSE 264
           C +K  +    + SE
Sbjct: 568 CDDKLDQSVKQILSE 582



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 3/256 (1%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + M+     P    +N LL     T +      L   M+S G    V++ +I
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C       A S+ +++L  G++PD     TL  GL    ++  A  LFD+M   G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY T I+GLCK G    A+ L  ++    C+ D+  Y S+ID LCK  ++  A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ +I  LCN  +      L   M  + ++P+V+ F  ++   
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 425 I---RINEPSKVIELL 437
               +I E   V++++
Sbjct: 288 CKEGKITEAHDVVDMM 303



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 99/190 (52%), Gaps = 7/190 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +   ++     PD  T+  L+  LC +S + EA AL   +     +PD+  
Sbjct: 395 VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 454

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++G+CR      A ++F  +++          PN  TYT +I+GLC+ G +D+A +
Sbjct: 455 YTIVIDGMCRAGELEAARDIFSNLSSKG------LRPNVRTYTIMINGLCRRGLLDEANK 508

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L ++M      P+  TY ++ +G    K+   A +L  EM+ +G   +V T  ++++ LC
Sbjct: 509 LFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 568

Query: 181 KNGKMDEASR 190
            + K+D++ +
Sbjct: 569 DD-KLDQSVK 577


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  350 bits (899), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 172/453 (37%), Positives = 272/453 (60%), Gaps = 6/453 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            + VLG+++K  + PD  TF +LIKGL  E ++ EA  L  ++   GC+PDV TY ++VN
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G+CR+  T +AL+L  +M   N       + +  TY+TIID LC++G +D A  L  +M+
Sbjct: 202 GICRSGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            K IK +VVTY S++RG C A  WN+   L  +M+ + + PNV+TFNV++D   K GK+ 
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA+ L   MI  G+ P+  TYNTL+DG+C+  R++ A  +   M    C   + +++ LI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            GYC  K ++  + ++  +  +G+  + V ++ L  G  +  +++ A +LF EM  +GV 
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D  TY   +DGLC NG + +A+E+F  L+  K +  I  Y ++I+G+CK G++E A  L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F SLPC  + PNV+TY++MI GLC  G + +A  L   MEE+   PN  T++ LIR  +R
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             + +   +L+ +MK      DAS + +V+D+L
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 232/420 (55%), Gaps = 6/420 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+VS   V++ R++++   PD VT+ S++ G+C       A  L  K+     + DVFTY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +T+++ LCR      A++LF+EM       G+  + + VTY +++ GLCK G  +    L
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETK----GI--KSSVVTYNSLVRGLCKAGKWNDGALL 285

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  + I PNV+T+  ++  F       EA  L+ EM+ +G+ PN++T+N +MD  C 
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA+ +LDLM+++   PD  T+ +L+ G+C+  RV+   ++F ++   G      +
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL+ G+C++ +I+ A  L+ EM+S G+ PDV+ +  L  GL +  ++E+A ++F+++Q
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++ +      Y T I+G+CK G + +A  LF +L     + ++  Y  +I GLCK G L 
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L R +      PN  TY+ +I     DG +  +  L  +M+      +  +  M+I
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 236/448 (52%), Gaps = 6/448 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++S   P  V F+     +    +         +L + G   +++T   ++N  CR   
Sbjct: 79  MIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCK 138

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
           T  A ++  ++     + G   EP+T T+ T+I GL  EG V +A  L+ +M +   +P+
Sbjct: 139 TCFAYSVLGKVM----KLGY--EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPD 192

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVTY S++ G C + D + A  L  +M ++ V+ +V T++ I+D LC++G +D A  L  
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G++    TYN+L+ G C  G+ N    L   M S      V ++++L++ + K  
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ A  LY EM+++GI P+++ +NTL  G    +++  A  + D M RN  + D  T+ 
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I G C    + + +++F  +       +   Y+ L+ G C+SG++++A ELF+ +   
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            ++P+V+TY I++ GLC++G+++KA ++F D++++ +   ++ +  +I G  +  +    
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
             L   +    V P+    ++++  L K
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCK 520



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 191/386 (49%), Gaps = 6/386 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A+ LF+EM            P+ V ++     + +    +   +   Q++   I  N+ T
Sbjct: 72  AIALFQEMIRSRPL------PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
              +I  FC       A  +  ++M  G +P+  TFN ++  L   GK+ EA  L+D M+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           ++G +PD  TYN++++G C +G  + A +L   ME    K  VF+YS +I+  C++  I+
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+SL+ EM +KGIK  VV +N+L  GL +  +      L  +M    +  +  T+   +
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D   K G + EA EL+  +       +I  YN+L+DG C   RL  A  +   +      
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P++VT++ +I G C   ++D    +F ++ +  +V N +T+ +L++GF +  +     EL
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
             +M    V+PD     I++D L  N
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDN 451



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 174/350 (49%), Gaps = 4/350 (1%)

Query: 111 KEGFVDKAKE----LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           + G VD  K+    L  +M      P++V ++         K +N       ++   G+ 
Sbjct: 61  RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
            N+ T N++++  C+  K   A  +L  +++ G  PD  T+NTL+ G  L G+V+ A  L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              M   GC+  V +Y+ ++NG C++ +   AL L  +M  + +K DV  ++T+   L  
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              ++ A  LF EM+  G+ +   TY + + GLCK G   +   L   +   +   ++  
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           +N L+D   K G+L+ A EL++ +    + PN++TY+ ++ G C   ++ +A ++   M 
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            N   P+++TF  LI+G+  +      +++   + +  ++ +A   SI+V
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 145/289 (50%), Gaps = 4/289 (1%)

Query: 173 NVIMDELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           NV   E  ++G    K D+A  L   MI+    P    ++        T + N   +   
Sbjct: 53  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            +E  G  H +++ +I+IN +C+  +   A S+  +++  G +PD    NTL  GLF   
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           +V  A  L D M  NG   D  TY + ++G+C++G    A++L   +     + D+  Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           ++ID LC+ G ++ A+ LF+ +    +  +VVTY+ ++ GLC  G+ +    L  DM   
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +VPNVITF++L+  F++  +  +  EL  +M    + P+    + ++D
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  349 bits (895), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 169/462 (36%), Positives = 274/462 (59%), Gaps = 6/462 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +    + VLG+++K  + PD  TF +LI GLC E ++ +A  L  ++   GC+PD+ TY 
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYN 197

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           ++VNG+CR+  T +A ++  +M   N       + +  TY+TIID LC++G +D A  L 
Sbjct: 198 SIVNGICRSGDTSLAFDMLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K IK +VVTY S++RG C A  WN+   L  +M+ + + PNV+TFNV++D   K 
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA+ L   MI  G+ P+  TYNTL+DG+C+  R++ A  +   M    C   + ++
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI GYC  K ++  + ++  +  +G+  + V ++ L  G  +  +++ A +LF EM  
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLC NG + +A+E+F  L+  K +  I  Y ++I+G+CK G++E 
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  LF SLPC  + PNV+TY++MI GLC  G + +A  L   MEE+   PN  T++ LIR
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             +R  + +   +L+ +MK      DAS + +V+D+L   E+
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGEL 593



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 183/406 (45%), Gaps = 74/406 (18%)

Query: 111 KEGFVDKAKE----LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           + G VD  K+    L  +M      P +V ++         K +N       ++   G+ 
Sbjct: 61  RSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
            N+ T N++++  C+  K   A  +L  +++ G  PD  T+NTL++G CL G+V+ A  L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVL 180

Query: 227 FVSMESMGC-----------------------------------KHTVFSYSILINGYCK 251
              M   GC                                   K  VF+YS +I+  C+
Sbjct: 181 VDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCR 240

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL--------------------------- 284
           +  I+ A+SL+ EM +KGIK  VV +N+L  GL                           
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300

Query: 285 FEI--------HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           F +         +++ A +L+ EM   G++ +  TY T +DG C    + EA  +   + 
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             KC  DI  + SLI G C   R++  +++FR++    LV N VTYSI++ G C  G++ 
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
            A +LF +M  + V+P+V+T+ +L+ G     +  K +E+   +++
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 150/298 (50%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           ++A  LF EM+     P +V F+     + +  + +        +  +G+  + +T N +
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ FC   +   A  +   +  +G +    +++ LING C   ++  A+ L   M+  G 
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +PD+V +N++  G+        AF +  +M+   V AD +TY T ID LC++G I  A+ 
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           LF  +     +  +  YNSL+ GLCK+G+      L + +    +VPNV+T+++++    
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +G++ +A +L+ +M    + PN+IT++ L+ G+   N  S+   +L  M      PD
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 144/289 (49%), Gaps = 4/289 (1%)

Query: 173 NVIMDELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           NV   E  ++G    K D+A  L   MI+    P    ++        T + N   +   
Sbjct: 53  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            +E  G  H +++ +I+IN +C+  +   A S+  +++  G +PD    NTL  GL    
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEG 172

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           +V +A  L D M  NG   D  TY + ++G+C++G    A ++   +     + D+  Y+
Sbjct: 173 KVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYS 232

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           ++ID LC+ G ++ A+ LF+ +    +  +VVTY+ ++ GLC  G+ +    L  DM   
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +VPNVITF++L+  F++  +  +  EL  +M    + P+    + ++D
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 172/458 (37%), Positives = 274/458 (59%), Gaps = 6/458 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +    + VLG+++K  + PD  TF +LI GLC ES++ EA  L  ++   GC+P+V TY 
Sbjct: 115 KTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYN 174

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           ++VNG+C++  T +AL+L  +M   N       + +  TY+TIID LC++G +D A  L 
Sbjct: 175 SIVNGICKSGDTSLALDLLRKMDERN------VKADVFTYSTIIDSLCRDGCIDAAISLF 228

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K IK ++VTY S++ G C A  WN+  +L  +M  + + PNV+TFNV++D   K 
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA+ L   MI  G+ P+  TYN+L+DG+C+  R++ A  +   M    C   + ++
Sbjct: 289 GKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTF 348

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI GYCK K ++  + L+ ++  +G+  + V ++ L  G  +  ++E A +LF EM  
Sbjct: 349 TSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVS 408

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV  D  TY   +DGLC NG + +A+E+F  L+  K   DI  Y  +I+G+CK G++E 
Sbjct: 409 LGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVED 468

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  LF SLPC  + PNV+TY++MI GLC  G + +A  L   MEE+   PN  T++ LIR
Sbjct: 469 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIR 528

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
             +R  + +   +L+ +MK      DAS + +V+D+L+
Sbjct: 529 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLS 566



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 254/472 (53%), Gaps = 8/472 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++S   P  V F+    G+ +  +         K+ + G   +++T   ++N  CR   
Sbjct: 56  MIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCK 115

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
           T  A ++  ++     + G   EP+T T+ T+I+GLC E  V +A  L+ +M +   +PN
Sbjct: 116 TCFAYSVLGKVM----KLGY--EPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPN 169

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVTY S++ G C + D + A  L  +M ++ V+ +V T++ I+D LC++G +D A  L  
Sbjct: 170 VVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 229

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G++    TYN+L+ G C  G+ N   +L   M S      V ++++LI+ + K  
Sbjct: 230 EMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEG 289

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ A  LY EM++KGI P+ + +N+L  G    +++  A  + D M RN  + D  T+ 
Sbjct: 290 KLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFT 349

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I G CK   + E ++LF  +       +   Y+ L+ G C+SG+LEIA ELF+ +   
Sbjct: 350 SLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSL 409

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            ++P+V+TY I++ GLC++G+++KA ++F D++++ +  +++ + ++I G  +  +    
Sbjct: 410 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDA 469

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESN 485
             L   +    V P+    ++++  L K   SL S  +  + + +E+ +E N
Sbjct: 470 WNLFCSLPCKGVKPNVMTYTVMISGLCKKG-SL-SEANILLRKMEEDGNEPN 519



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 166/318 (52%), Gaps = 6/318 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ + G  +L  +      P+ +TF  LI     E ++ EA  L+ ++   G  P+  TY
Sbjct: 254 GKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITY 313

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++G C  +    A N+ + M   N      C P+ VT+T++I G CK   VD+  +L
Sbjct: 314 NSLMDGYCMQNRLSEANNMLDLMVRNN------CSPDIVTFTSLIKGYCKVKRVDEGMKL 367

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++  + +  N VTY+ +++GFC +     A+ LF EM+  GV P+V+T+ +++D LC 
Sbjct: 368 FRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCD 427

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NGK+++A  + + + +  +  D   Y  +++G C  G+V  A  LF S+   G K  V +
Sbjct: 428 NGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 487

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+++I+G CK   +  A  L  +M   G +P+   +NTL         +  + KL +EM+
Sbjct: 488 YTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 547

Query: 302 RNGVAADTWTYRTFIDGL 319
             G +AD  + +  ID L
Sbjct: 548 SCGFSADASSIKMVIDML 565



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 176/341 (51%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A +L  +M      P++V ++    G    K +N       +M   G+  N+ T N++
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++  C+  K   A  +L  +++ G  PD  T+NTL++G CL  +V+ A  L   M   GC
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V +Y+ ++NG CK+ +   AL L  +M  + +K DV  ++T+   L     ++ A  
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           LF EM+  G+ +   TY + + GLCK G   + V+L   +   K   ++  +N LID   
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K G+L+ A EL++ +    + PN +TY+ ++ G C   ++ +A ++   M  N   P+++
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           TF  LI+G+ ++    + ++L  K+ +  ++ +    SI+V
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 139/274 (50%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K D+A  L   MI+    P    ++    G   T + N   +    ME  G  H +++ +
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I+IN +C+  +   A S+  +++  G +PD    NTL  GL    +V  A  L   M  N
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  TY + ++G+CK+G    A++L   +     + D+  Y+++ID LC+ G ++ A
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           + LF+ +    +  ++VTY+ ++GGLC  G+ +    L  DM    ++PNVITF++LI  
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           F++  +  +  EL  +M    + P+    + ++D
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMD 318



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 9/180 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +   + KS    D V +T +I+G+C   ++ +A  LF  L   G +P+V TY
Sbjct: 429 GKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 488

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           T +++GLC+      A  L  +M  +GN       EPN  TY T+I    ++G +  + +
Sbjct: 489 TVMISGLCKKGSLSEANILLRKMEEDGN-------EPNDCTYNTLIRAHLRDGDLTASAK 541

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDW-NEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L+ +MK      +  +   VI     A  W  E +R       +G Q  ++ FN I   L
Sbjct: 542 LIEEMKSCGFSADASSIKMVIDMLSSAVWWFKEPRRSPGVKRFRGTQAYLMPFNTITASL 601


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  347 bits (891), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 183/460 (39%), Positives = 265/460 (57%), Gaps = 6/460 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+ + F VL ++LK    PD  TF +LI+GLC E +I EA  LF K    G +PDV TY 
Sbjct: 200 RLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYG 259

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NGLC+  +T  A+ L   M   N      C PN + Y TIID LCK+  V +A  L 
Sbjct: 260 TLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVIAYNTIIDSLCKDRQVTEAFNLF 313

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  K I P++ TY S+I   C   +W     L  EM++  + PNVV F+ ++D LCK 
Sbjct: 314 SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 373

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +  A  ++D+MI+ GV PD  TY  L+DG CL   ++ A ++F +M   GC   V SY
Sbjct: 374 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 433

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +ILINGYC+ + ++ A+ L  +M  +G+  D V +NTL  GL  + +++ A  LF EM  
Sbjct: 434 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 493

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G   D  TYR  +D LCKN ++ EA+ L   +     + DI  YN  IDG+C++G LE 
Sbjct: 494 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 553

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A +LF +L    L P+V TY+IMI GLC  G +D+A  LF  M+EN    +   ++ +IR
Sbjct: 554 ARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIR 613

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           GF+R NE     +LL +M       D S  +++V++L+ +
Sbjct: 614 GFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDD 653



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 188/367 (51%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TV +T ++  + K         L  QM    I P+V T   +I  FC+ +    A  +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TFN ++  LC  GK+ EA  L D  I  G +PD  TY TL++G C 
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SM    C+  V +Y+ +I+  CK++++  A +L+SEM++KGI PD+  
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L   L  + + +    L +EM  + +  +   + T +D LCK G I  A ++   + 
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E D+  Y +L+DG C    ++ A+++F ++     VPNV +Y+I+I G C   +MD
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  L   M    ++ + +T++ LI G   +      I L H+M     +PD     I++
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507

Query: 457 DLLAKNE 463
           D L KN 
Sbjct: 508 DYLCKNH 514



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 148/310 (47%), Gaps = 6/310 (1%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ---HGVRPDAFTY 207
           ++A   F  M+     P+ V F  ++  +    KM   S +L L  Q    G+ PD +T 
Sbjct: 132 DDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPPDVYTL 188

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L++ FC   R+ +A  +   +  +GC+    +++ LI G C   +I  AL L+ + + 
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G +PDVV + TL  GL ++     A +L   M +     +   Y T ID LCK+  + E
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  LF  +       DI  YNSLI  LC     +    L   +    ++PNVV +S ++ 
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 368

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC +G +  A D+   M +  V P+V+T+  L+ G    +E  + +++   M     +P
Sbjct: 369 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 428

Query: 448 DASIVSIVVD 457
           +    +I+++
Sbjct: 429 NVRSYNILIN 438



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 128/273 (46%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + M+     P    +  LL         +    L   M+S G    V++ +I
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C  + +  A S+ +++L  G +PD    NTL  GL    ++  A  LFD+    G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D  TY T ++GLCK G    A+ L  ++    C  ++ AYN++ID LCK  ++  A 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ +I  LCN  +      L  +M  + ++PNV+ F  ++   
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +    +   +++  M +  V PD    + ++D
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMD 403



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 6/191 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+ H   +   ++ S   PD VT+  L+  LC    + EA  L   +     + D+  
Sbjct: 478 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 537

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y   ++G+CR      A +LF  +++         +P+  TY  +I GLCK G +D+A +
Sbjct: 538 YNIAIDGMCRAGELEAARDLFSNLSSKG------LQPDVRTYNIMIHGLCKRGLLDEANK 591

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M +     +   Y ++IRGF  + +   A +L  EM+ +G   +V T  +I++ L 
Sbjct: 592 LFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLS 651

Query: 181 KNGKMDEASRL 191
            +G      RL
Sbjct: 652 DDGLDQSFERL 662


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  347 bits (890), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 183/462 (39%), Positives = 269/462 (58%), Gaps = 6/462 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+   F VL +ILK    P+  TF +LI+GLC E +I E   LF K+   G +P+V T
Sbjct: 116 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 175

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  A+ L   M  GN      C+P+ V YT+IID LCK+  V +A  
Sbjct: 176 YGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVVVYTSIIDSLCKDRQVTQAFN 229

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P++ TY S+I   C   +W     L  EM++  + PNVV F+ ++D LC
Sbjct: 230 LFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALC 289

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  ++D+MI+ GV P+  TYN L+DG CL   ++ A ++F +M   G    V 
Sbjct: 290 KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVV 349

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYS LINGYCK + IE A+ L+ EM  K + P+ V ++TL  GL  + +++ A  LF EM
Sbjct: 350 SYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM 409

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D  +Y   +D LCKN  + EA+ L   +     + DI+ Y  +IDG+C++G L
Sbjct: 410 VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 469

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +LF +L    L PNV TY+IMI GLC  G + +A  LF +M+     PN  T++++
Sbjct: 470 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 529

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            RGF+R NE  + I+LL +M       D S  +++V++L+ +
Sbjct: 530 TRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDD 571



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 190/367 (51%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+   +T ++  + K         L  QM    I PN+ T   +I  FC+ +    A  +
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QPN+ TFN ++  LC  GK+ E   L D MI  G +P+  TY TL++G C 
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SME   C+  V  Y+ +I+  CK++++  A +L+SEM+ +GI P +  
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L   L  + + +    L +EM  + +  +   + T +D LCK G ++EA ++   + 
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E ++  YN+L+DG C    ++ A+++F ++ C    P+VV+YS +I G C   +++
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  LF +M    ++PN +T+  L+ G   +      I L H+M     +PD     I++
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425

Query: 457 DLLAKNE 463
           D L KN 
Sbjct: 426 DYLCKNR 432



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 173/321 (53%), Gaps = 12/321 (3%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           H   +L  ++ S   P+ V F++++  LC E ++MEA  +   +   G EP+V TY  L+
Sbjct: 261 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 320

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGLCKEGFVDKAKELL 122
           +G C  S    A+ +F+ M         VC+   P+ V+Y+T+I+G CK   ++KA  L 
Sbjct: 321 DGHCLRSEMDEAVKVFDTM---------VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 371

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  K + PN VTY++++ G C+     +A  LF EM+ +G  P+ V++ +++D LCKN
Sbjct: 372 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 431

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DEA  LL  +    + PD   Y  ++DG C  G +  A++LF ++ S G    V++Y
Sbjct: 432 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 491

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +I+ING C+   +  A  L+ EM  KG  P+   +N +  G    ++  R  +L  EM  
Sbjct: 492 TIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLA 551

Query: 303 NGVAADTWTYRTFIDGLCKNG 323
            G +AD  T    ++ L  +G
Sbjct: 552 RGFSADVSTSTVLVEMLSDDG 572



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 180/387 (46%), Gaps = 29/387 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G  S    +L  + +    PD V +TS+I  LC + ++ +A  LF+++   G  P +FT
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV-------------------------- 94
           Y +L++ LC          L  EM N      VV                          
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               EPN VTY  ++DG C    +D+A ++   M  K   P+VV+Y+++I G+C  +   
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A  LF EM  + + PN VT++ +M  LC  G++ +A  L   M+  G  PD  +Y  LL
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           D  C   R++ A  L  ++E       +  Y+I+I+G C+  E+E A  L+S + SKG+ 
Sbjct: 426 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 485

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P+V  +  +  GL +   +  A KLF EM+R G + +  TY     G  +N   +  ++L
Sbjct: 486 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQL 545

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSG 358
              +       D+     L++ L   G
Sbjct: 546 LQEMLARGFSADVSTSTVLVEMLSDDG 572



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 129/273 (47%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + M+     P    +  LL         +    L   M+S G    +++ +I
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C  + +  A S+ +++L  G +P++   NTL  GL    ++     LFD+M   G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY T I+GLCK G    A+ L  ++    C+ D+  Y S+ID LCK  ++  A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ +I  LCN  +      L  +M  + ++PNV+ F  ++   
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +  +  +  +++  M +  V P+    + ++D
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD 321



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 6/197 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +   ++     PD V++  L+  LC   R+ EA AL   +     +PD+  
Sbjct: 396 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 455

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++G+CR      A +LF  +++          PN  TYT +I+GLC++G + +A +
Sbjct: 456 YTIVIDGMCRAGELEAARDLFSNLSSKG------LHPNVWTYTIMINGLCQQGLLAEASK 509

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +MK K   PN  TY  + RGF    +     +L  EM+ +G   +V T  V+++ L 
Sbjct: 510 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLS 569

Query: 181 KNGKMDEASRLLDLMIQ 197
            +G      ++L   +Q
Sbjct: 570 DDGLDQSVKQILSEFLQ 586


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 173/448 (38%), Positives = 269/448 (60%), Gaps = 6/448 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV  GF VL +++K    P  VTFT+LI GLC      +A  LF  +   GC+PDV+T
Sbjct: 141 LQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYT 200

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++NGLC+   T  A  L ++M          C+PN VTY+T+ID LC++  V++A +
Sbjct: 201 YNTIINGLCKIGETAAAAGLLKKMEEAG------CQPNMVTYSTLIDSLCRDRLVNEALD 254

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   MK K I P++ TYTS+I+G C    W EA  L  EM    + P++VTFNV++D  C
Sbjct: 255 IFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFC 314

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +L  M + GV P+  TY++L+ G+ L   V  A++LF  M + GCK  +F
Sbjct: 315 KEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIF 374

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILINGYCK K I+ A+ L++EM+ +G+ P+ V +NTL  G  ++ ++  A  LF  M
Sbjct: 375 SYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNM 434

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D +TY   +DG CK GY+ +A  LF  ++    + ++  Y  L+  +CKSG  
Sbjct: 435 CTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNH 494

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A +LF  L    L P+V  Y+ +I GLC +G +D+A + F +ME +   P+ I+++++
Sbjct: 495 KDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVI 554

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD 448
           IRG ++  + S+ + L+ +M++   + D
Sbjct: 555 IRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 232/453 (51%), Gaps = 7/453 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P  + F  L+  +    +  +   +L  ++ + G  P+++T +  +N  C+     +  +
Sbjct: 90  PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFS 149

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  ++     + G+  +P  VT+TT+I+GLCK G   +A EL   M  K  +P+V TY +
Sbjct: 150 VLAKVI----KLGL--QPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNT 203

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C   +   A  L  +M + G QPN+VT++ ++D LC++  ++EA  +   M   G
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKG 263

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD FTY +L+ G C   R   A  L   M S+     + ++++L++ +CK  ++  AL
Sbjct: 264 ISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAL 323

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +   M   G++P+VV +++L  G      V  A KLF  M   G   + ++Y   I+G 
Sbjct: 324 GVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGY 383

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   I EA++LF+ +       +  +YN+LI G C+ G+L  A +LFR++     +P++
Sbjct: 384 CKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDL 443

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TYSI++ G C  G + KA  LF  M+   + PN++ + +L+    +        +L  +
Sbjct: 444 FTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSE 503

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           +    + P   + + +++ L K  +   +L +F
Sbjct: 504 LFVQGLQPHVQLYTTIINGLCKEGLLDEALEAF 536



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 147/273 (53%), Gaps = 6/273 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+VS    VL  + +    P+ VT++SL+ G    + ++EA  LF  +   GC+P++F+Y
Sbjct: 317 GKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSY 376

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+      A+ LF EM +          PN V+Y T+I G C+ G + +A++L
Sbjct: 377 NILINGYCKAKRIDEAMQLFNEMIHQG------LTPNNVSYNTLIHGFCQLGKLREAQDL 430

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M      P++ TY+ ++ GFC      +A RLF  M    ++PN+V + +++  +CK
Sbjct: 431 FRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCK 490

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G   +A +L   +   G++P    Y T+++G C  G ++ A E F +ME+ GC     S
Sbjct: 491 SGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEIS 550

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           Y+++I G  ++K+   AL L  EM  +G   DV
Sbjct: 551 YNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 1/185 (0%)

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG-YIVEAVELFHTLRILKCEFDIRAYN 348
           ++ A   F+ M           +   +  + K G Y    + L   + ++    +I   +
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
             ++  C+  R+++   +   +    L P +VT++ +I GLC  G+  +A +LF DM   
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
              P+V T++ +I G  +I E +    LL KM+E    P+    S ++D L ++ +   +
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 469 LPSFT 473
           L  F+
Sbjct: 253 LDIFS 257


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 183/462 (39%), Positives = 269/462 (58%), Gaps = 6/462 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+   F VL +ILK    P+  TF +LI+GLC E +I E   LF K+   G +P+V T
Sbjct: 107 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 166

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  A+ L   M  GN      C+P+ V YT+IID LCK+  V +A  
Sbjct: 167 YGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVVVYTSIIDSLCKDRQVTQAFN 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P++ TY S+I   C   +W     L  EM++  + PNVV F+ ++D LC
Sbjct: 221 LFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  ++D+MI+ GV P+  TYN L+DG CL   ++ A ++F +M   G    V 
Sbjct: 281 KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVV 340

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYS LINGYCK + IE A+ L+ EM  K + P+ V ++TL  GL  + +++ A  LF EM
Sbjct: 341 SYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM 400

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D  +Y   +D LCKN  + EA+ L   +     + DI+ Y  +IDG+C++G L
Sbjct: 401 VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 460

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +LF +L    L PNV TY+IMI GLC  G + +A  LF +M+     PN  T++++
Sbjct: 461 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 520

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            RGF+R NE  + I+LL +M       D S  +++V++L+ +
Sbjct: 521 TRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDD 562



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 190/367 (51%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+   +T ++  + K         L  QM    I PN+ T   +I  FC+ +    A  +
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QPN+ TFN ++  LC  GK+ E   L D MI  G +P+  TY TL++G C 
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SME   C+  V  Y+ +I+  CK++++  A +L+SEM+ +GI P +  
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L   L  + + +    L +EM  + +  +   + T +D LCK G ++EA ++   + 
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E ++  YN+L+DG C    ++ A+++F ++ C    P+VV+YS +I G C   +++
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  LF +M    ++PN +T+  L+ G   +      I L H+M     +PD     I++
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 457 DLLAKNE 463
           D L KN 
Sbjct: 417 DYLCKNR 423



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 173/321 (53%), Gaps = 12/321 (3%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           H   +L  ++ S   P+ V F++++  LC E ++MEA  +   +   G EP+V TY  L+
Sbjct: 252 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 311

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGLCKEGFVDKAKELL 122
           +G C  S    A+ +F+ M         VC+   P+ V+Y+T+I+G CK   ++KA  L 
Sbjct: 312 DGHCLRSEMDEAVKVFDTM---------VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 362

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  K + PN VTY++++ G C+     +A  LF EM+ +G  P+ V++ +++D LCKN
Sbjct: 363 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 422

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DEA  LL  +    + PD   Y  ++DG C  G +  A++LF ++ S G    V++Y
Sbjct: 423 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 482

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +I+ING C+   +  A  L+ EM  KG  P+   +N +  G    ++  R  +L  EM  
Sbjct: 483 TIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLA 542

Query: 303 NGVAADTWTYRTFIDGLCKNG 323
            G +AD  T    ++ L  +G
Sbjct: 543 RGFSADVSTSTVLVEMLSDDG 563



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 180/387 (46%), Gaps = 29/387 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G  S    +L  + +    PD V +TS+I  LC + ++ +A  LF+++   G  P +FT
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV-------------------------- 94
           Y +L++ LC          L  EM N      VV                          
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               EPN VTY  ++DG C    +D+A ++   M  K   P+VV+Y+++I G+C  +   
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A  LF EM  + + PN VT++ +M  LC  G++ +A  L   M+  G  PD  +Y  LL
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           D  C   R++ A  L  ++E       +  Y+I+I+G C+  E+E A  L+S + SKG+ 
Sbjct: 417 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 476

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P+V  +  +  GL +   +  A KLF EM+R G + +  TY     G  +N   +  ++L
Sbjct: 477 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQL 536

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSG 358
              +       D+     L++ L   G
Sbjct: 537 LQEMLARGFSADVSTSTVLVEMLSDDG 563



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 129/273 (47%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + M+     P    +  LL         +    L   M+S G    +++ +I
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C  + +  A S+ +++L  G +P++   NTL  GL    ++     LFD+M   G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY T I+GLCK G    A+ L  ++    C+ D+  Y S+ID LCK  ++  A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ +I  LCN  +      L  +M  + ++PNV+ F  ++   
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +  +  +  +++  M +  V P+    + ++D
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD 312



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 6/197 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +   ++     PD V++  L+  LC   R+ EA AL   +     +PD+  
Sbjct: 387 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 446

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++G+CR      A +LF  +++          PN  TYT +I+GLC++G + +A +
Sbjct: 447 YTIVIDGMCRAGELEAARDLFSNLSSKG------LHPNVWTYTIMINGLCQQGLLAEASK 500

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +MK K   PN  TY  + RGF    +     +L  EM+ +G   +V T  V+++ L 
Sbjct: 501 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLS 560

Query: 181 KNGKMDEASRLLDLMIQ 197
            +G      ++L   +Q
Sbjct: 561 DDGLDQSVKQILSEFLQ 577


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 195/516 (37%), Positives = 274/516 (53%), Gaps = 60/516 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F VL +ILK    PD  TFT+LI+G+C E +I EA  LF K+   G  PDV T
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVT 168

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+  +T  A+ L   M   N      C+PN   Y TIID LCK+  V +A  
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVFAYNTIIDSLCKDRQVTEAFN 222

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P++ TY S+I   C   +W     L  EM+D  + P+VV+FN ++D LC
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  ++D MIQ GV P+  TY  L+DG CL   ++ A ++F +M   GC   V 
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342

Query: 241 SYSILINGYCKNKEIEGAL-------------------SLYSEMLSKGIKPDVVIHNTLF 281
           SY+ LINGYCK + I+ A+                    ++  M+ KG  P+V+ +NTL 
Sbjct: 343 SYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLI 402

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG----------------------- 318
            G  +I ++++A  LF EM R  +  DT TY T I G                       
Sbjct: 403 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 462

Query: 319 ------------LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
                       LCKN Y+ EA+ L   +     + DI+  N  IDG+C++G LE A +L
Sbjct: 463 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 522

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F +L    L P+V TYSIMI GLC  G +D+A  LF +M+EN    N   ++ + RGF+R
Sbjct: 523 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 582

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            NE S+ I+LL +M       DAS +++ V +L+ +
Sbjct: 583 NNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDD 618



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 200/421 (47%), Gaps = 54/421 (12%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TV +  ++  + K         L  QM    I PN+ T   +I  FC+      A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TF  ++  +C  GK+ EA  L D MI  G RPD  TY TL++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SM    C+  VF+Y+ +I+  CK++++  A +L+SEM++KGI PD+  
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV---------- 326
           +N+L   L  + + +    L +EM  + +  D  ++ T +D LCK G +           
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 327 -------------------------EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
                                    EAV++F T+    C  ++ +YN+LI+G CK  R++
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 362 IAL-------------------ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
            A+                   ++F ++ C   +PNV++Y+ +I G C   ++DKA  LF
Sbjct: 359 KAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 418

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +M    ++P+ +T+  LI G   +      I L H+M   + +P+     I++D L KN
Sbjct: 419 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 478

Query: 463 E 463
            
Sbjct: 479 R 479



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 176/335 (52%), Gaps = 13/335 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V+    V+ ++++    P+ VT+T+L+ G C  S + EA  +F  +   GC P+V +Y
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 62  TTLVNGLCRTSHTIVA-------------LNLFEEMANGNGEFGVVCEPNTVTYTTIIDG 108
            TL+NG C+      A             LN+ E +   +      C PN ++Y T+I+G
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            CK   +DKA  L  +M  + + P+ VTY+++I G C+ +   +A  LF EM+     PN
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 464

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           +VT+ +++D LCKN  + EA  LL  +    + PD    N  +DG C  G +  A++LF 
Sbjct: 465 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 524

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
           ++ S G +  V++YSI+ING C+   ++ A  L+ EM   G   +  I+NT+  G    +
Sbjct: 525 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 584

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           +  RA +L  EM   G +AD  T   F+  L  +G
Sbjct: 585 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 6/295 (2%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL---MIQHGVRPDAFTYNTLLDG 213
           F  M+     P+ V FN ++  +    KM   S LL L   M   G+ P+ +T + L++ 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINS 105

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           FC   RV  A  +   +  +G +    +++ LI G C   +I  AL L+ +M+ +G +PD
Sbjct: 106 FCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPD 165

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV + TL  GL ++     A +L   M +     + + Y T ID LCK+  + EA  LF 
Sbjct: 166 VVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFS 225

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +       DI  YNSLI  LC     +    L   +    ++P+VV+++ ++  LC +G
Sbjct: 226 EMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEG 285

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           ++ +A D+   M +  V PNV+T+  L+ G   ++E  + +++   M     MP+
Sbjct: 286 KVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 134/273 (49%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D A    + M++    P    +N LL         +    L   M+S G    +++  I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C    +  A S+ +++L  G +PD     TL  G+    ++  A  LFD+M   G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D  TY T I+GLCK G    A+ L  ++    C+ ++ AYN++ID LCK  ++  A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ +I  LCN  +      L  +M ++ ++P+V++F+ ++   
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +  + ++  +++ KM +  V P+    + ++D
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMD 314


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 175/457 (38%), Positives = 274/457 (59%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++G++++  + PD+ TF +LI GL   +R  EA AL  ++ V GC+PD+ TY 
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VNGLC+     +AL+L ++M  G        EP  V Y TIID LC    V+ A  L 
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGK------IEPGVVIYNTIIDALCNYKNVNDALNLF 279

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +K I+PNVVTY S+IR  C    W++A RL  +M+++ + PNVVTF+ ++D   K 
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L D MI+  + PD FTY++L++GFC+  R++ AK +F  M S  C   V +Y
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+CK K ++  + L+ EM  +G+  + V + TL  G F+  + + A  +F +M  
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLC NG +  A+ +F  L+  K E DI  YN +I+G+CK+G++E 
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF SL    + PNVVTY+ M+ G C  G  ++A  LF +M+E   +P+  T++ LIR
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+    + DAS + +V ++L
Sbjct: 580 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 232/452 (51%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G ++KS   P  V F+ L+  +   ++     +L  +++  G   +++TY+ L+N  C
Sbjct: 68  LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R S   +AL +  +M     + G   EP+ VT  ++++G C    +  A  L+ QM +  
Sbjct: 128 RRSQLSLALAVLAKMM----KLGY--EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +P+  T+ ++I G       +EA  L   M+ +G QP++VT+ ++++ LCK G +D A 
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M Q  + P    YNT++D  C    VN A  LF  M++ G +  V +Y+ LI   
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C       A  L S+M+ + I P+VV  + L     +  ++  A KL+DEM +  +  D 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +TY + I+G C +  + EA  +F  +    C  ++  YN+LI G CK+ R++  +ELFR 
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    LV N VTY+ +I G     + D A+ +F  M  + V+P+++T+ +L+ G     +
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               + +   ++   + PD    +I+++ + K
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 213/407 (52%), Gaps = 6/407 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P +  ++ L++ + + +   + ++L E+M N     G+    N  TY+ +I+  C+   +
Sbjct: 79  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SHNLYTYSILINCFCRRSQL 132

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A  +L +M     +P++VT  S++ GFC+    ++A  L  +M++ G QP+  TFN +
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  L ++ +  EA  L+D M+  G +PD  TY  +++G C  G ++ A  L   ME    
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V  Y+ +I+  C  K +  AL+L++EM +KGI+P+VV +N+L   L    +   A +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M    +  +  T+   ID   K G +VEA +L+  +     + DI  Y+SLI+G C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
              RL+ A  +F  +      PNVVTY+ +I G C   ++D+  +LF +M +  +V N +
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T+  LI GF +  E      +  +M    V+PD    SI++D L  N
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 203/404 (50%), Gaps = 10/404 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L ++ +    P  V + ++I  LC    + +A  LFT++   G  P+V TY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+  LC       A  L  +M            PN VT++ +ID   KEG + +A++L
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERK------INPNVVTFSALIDAFVKEGKLVEAEKL 348

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I P++ TY+S+I GFC     +EAK +F  M+ +   PNVVT+N ++   CK
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++DE   L   M Q G+  +  TY TL+ GF      ++A+ +F  M S G    + +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL++G C N ++E AL ++  +    ++PD+  +N +  G+ +  +VE  + LF  + 
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  +  TY T + G C+ G   EA  LF  ++      D   YN+LI    + G   
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKA 588

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            + EL R +     V +  T   ++  + +DG++DK+   FL M
Sbjct: 589 ASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKS---FLKM 628



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 157/307 (51%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           ++A  LF +M+     P++V F+ ++  + K  K D    L + M   G+  + +TY+ L
Sbjct: 63  DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ FC   +++ A  +   M  +G +  + + + L+NG+C    I  A+SL  +M+  G 
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +PD    NTL  GLF  ++   A  L D M   G   D  TY   ++GLCK G I  A+ 
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +   K E  +  YN++ID LC    +  AL LF  +    + PNVVTY+ +I  LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
           N G+   A  L  DM E  + PNV+TF  LI  F++  +  +  +L  +M + ++ PD  
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 451 IVSIVVD 457
             S +++
Sbjct: 363 TYSSLIN 369



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 146/278 (52%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+D+A  L   M++    P    ++ LL       + +    L   M+++G  H +++YS
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           ILIN +C+  ++  AL++ ++M+  G +PD+V  N+L  G    +++  A  L  +M   
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D++T+ T I GL ++    EAV L   + +  C+ D+  Y  +++GLCK G +++A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L L + +  G + P VV Y+ +I  LCN   ++ A +LF +M+   + PNV+T++ LIR 
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                  S    LL  M E  + P+    S ++D   K
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 107/220 (48%)

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ A++L+ +M+     P +V  + L   + ++++ +    L ++MQ  G++ + +TY 
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I+  C+   +  A+ +   +  L  E DI   NSL++G C   R+  A+ L   +   
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P+  T++ +I GL    +  +A  L   M      P+++T+ +++ G  +  +    
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           + LL KM++  + P   I + ++D L   +   ++L  FT
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 190/522 (36%), Positives = 291/522 (55%), Gaps = 82/522 (15%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+++LIKGLC + RI EA  LF  ++  GC PD   Y TL+ GLC+T    +AL+L 
Sbjct: 44  DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 103

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM N   ++G+ C+P  V+Y+ IIDGLCK+   D+A+EL  +MK + + P+V++YTS+I
Sbjct: 104 QEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI 163

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GFC +  W +AK LF EM+D G++ +V T ++++D LCK GK+ EA+ LL++MIQ G  
Sbjct: 164 HGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 223

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--------------------------- 234
            D  TY+TL+ G C+  R++ A  LF+SM+ +G                           
Sbjct: 224 LDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQL 283

Query: 235 --------------CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
                         CK T+ SYSI+I+G CK++  + A  L+ EM ++GI PDV+ + TL
Sbjct: 284 HQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTL 343

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE------------- 327
             G     + E+A  LF+EM   G+  D  T    ID LCK G ++E             
Sbjct: 344 IHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGC 403

Query: 328 ----------------------AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
                                 A +LF  ++ L C  ++    +L+ GLC+SG ++IALE
Sbjct: 404 IPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALE 463

Query: 366 LFRSL-----PCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L +++     P G+   PN ++YSI+I GLC  G+ D+AR+LF +M+   V+P+VI++  
Sbjct: 464 LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 523

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           LI GF R  +      L ++M +I V PD +  S+++D+L K
Sbjct: 524 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 565



 Score =  336 bits (862), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 173/453 (38%), Positives = 275/453 (60%), Gaps = 12/453 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+++LIKGLC + RI EA  LF  ++  GC PD   Y TL+ GLC+T +   AL L 
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLH 284

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM N  G +G+ C+P  ++Y+ IIDGLCK+   D+A+EL  +MK + I P+V++YT++I
Sbjct: 285 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLI 344

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GFC +  W +AK LF EM+D G+QP+V T +V++D LCK GK+ EA++LL+++IQ G  
Sbjct: 345 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 404

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  T  TL+ G C+  R++ A +LF+ M+ +GC   V + + L+ G C++  I+ AL L
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464

Query: 262 YSEMLSK----GI--KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +  MLS     GI  KP+ + ++ +  GL +  + + A +LF EM+  GV  D  +Y + 
Sbjct: 465 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 524

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I G C++G   +A  LF+ +  +  + D+  ++ LID LCK G++  A EL   +     
Sbjct: 525 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 584

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           +PN VTY+ ++ GLC + ++ +A  LF+ M++   +P+V+T+  L++G  +       +E
Sbjct: 585 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE 644

Query: 436 LLHKMKE------INVMPDASIVSIVVDLLAKN 462
           L  KM         N  PD    SI++D L K+
Sbjct: 645 LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 677



 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 146/369 (39%), Positives = 230/369 (62%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  +++    PD VT T+L+KGLC + RI +A  LF K++  GC P+V T 
Sbjct: 386 GKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTC 445

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GLC++ +  +AL L + M +    +G+ C+PN ++Y+ IIDGLCK G  D+A+EL
Sbjct: 446 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 505

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK   + P+V++YTS+I GFC +  W +AK LF EM+D GVQP+V TF+V++D LCK
Sbjct: 506 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 565

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA+ LL++MIQ G  P+  TY TL+ G C+  R++ A +LF+ M+ +GC   V +
Sbjct: 566 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVT 625

Query: 242 YSILINGYCKNKEIEGALSLYSEMLS------KGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           Y  L+ G C+   I+ AL L+ +MLS         KPDV+ ++ +  GL +  + + A +
Sbjct: 626 YGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE 685

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           LF EM+  GV  +  +Y + I G C++G + +A  LF+ +     + +   Y+ +I G C
Sbjct: 686 LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 745

Query: 356 KSGRLEIAL 364
           K G+++ AL
Sbjct: 746 KEGQIDKAL 754



 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 156/448 (34%), Positives = 259/448 (57%), Gaps = 18/448 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  ++++ +I GLC + R  EA  LF +++  G  PDV +YTTL++G C +     A  L
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 359

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM +      V  +P+  T + +ID LCK+G V +A +LL  +  +   P+VVT T++
Sbjct: 360 FNEMLD------VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTL 413

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ--- 197
           ++G C     ++A +LF++M   G  PNVVT   +M  LC++G +  A  L   M+    
Sbjct: 414 VKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 473

Query: 198 -HGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
            +G+  +P+A +Y+ ++DG C  GR + A+ELF  M+++G    V SY+ LI+G+C++ +
Sbjct: 474 PYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK 533

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            + A  L++EM+  G++PDV   + L   L +  +V  A +L + M + G   +T TY T
Sbjct: 534 WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTT 593

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            + GLC N  I EA +LF  ++ L C  D+  Y +L+ GLC++G ++ ALEL + +    
Sbjct: 594 LVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDT 653

Query: 375 ------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
                   P+V++YSI+I GLC  G+ D+AR+LF +M+   V+PNVI++  LI GF R  
Sbjct: 654 GQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSG 713

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVV 456
           +      L ++M +  V  +A   S+++
Sbjct: 714 KLEDAKHLFNEMVDQGVQLNAVTYSVMI 741



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/433 (33%), Positives = 236/433 (54%), Gaps = 20/433 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +++T+LI G C   +  +A  LF ++   G +PDV T + L++ LC+    I A  L
Sbjct: 335 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 394

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E +          C P+ VT TT++ GLC +  + KA +L L+M+     PNVVT  ++
Sbjct: 395 LEVVIQRG------CIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 448

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQ------GVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           ++G C + +   A  L   M+          +PN +++++I+D LCK G+ DEA  L   
Sbjct: 449 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE 508

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   GV PD  +Y +L+ GFC +G+   AK LF  M  +G +  V ++S+LI+  CK  +
Sbjct: 509 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 568

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  A  L   M+ +G  P+ V + TL  GL    ++  A +LF +MQ+ G   D  TY T
Sbjct: 569 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 628

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEF------DIRAYNSLIDGLCKSGRLEIALELFR 368
            + GLC+ G I  A+EL   +     ++      D+ +Y+ +IDGLCK GR + A ELF+
Sbjct: 629 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK 688

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    ++PNV++Y+ +I G C  G+++ A+ LF +M +  V  N +T+ ++I GF +  
Sbjct: 689 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 748

Query: 429 EPSKVIELLHKMK 441
           +  K   L  KM+
Sbjct: 749 QIDKA--LFQKME 759



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 148/455 (32%), Positives = 245/455 (53%), Gaps = 18/455 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +++TSLI G C   +  +A  LF ++   G   DV T + L++ LC+    I A  L
Sbjct: 154 PDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANEL 213

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E M          C  + VTY+T+I GLC +  + +A  L + M+    +P+ + Y ++
Sbjct: 214 LEVMIQRG------CILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTL 267

Query: 141 IRGFCYAKDWNEAKRLFIEMM-DQG-----VQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           ++G C   + N A +L  EM+ D G      +P ++++++I+D LCK+ + DEA  L   
Sbjct: 268 MKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKE 327

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   G+ PD  +Y TL+ GFCL+G+   AK LF  M  +G +  V + S+LI+  CK  +
Sbjct: 328 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 387

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  A  L   ++ +G  PDVV   TL  GL   H++ +A +LF +MQ+ G   +  T  T
Sbjct: 388 VIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 447

Query: 315 FIDGLCKNGYIVEAVELFHTLRI------LKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            + GLC++G I  A+EL   +        + C+ +  +Y+ +IDGLCK GR + A ELF+
Sbjct: 448 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 507

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    ++P+V++Y+ +I G C  G+   A+ LF +M +  V P+V TF +LI    +  
Sbjct: 508 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 567

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +  +  ELL  M +   +P+    + +V  L  N+
Sbjct: 568 KVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 602



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/425 (36%), Positives = 218/425 (51%), Gaps = 30/425 (7%)

Query: 6   HGFVVLGRILKS-CF---------TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HGF + G+  K+ C           PD  T + LI  LC + +++EA  L   +   GC 
Sbjct: 345 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 404

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PDV T TTLV GLC       A  LF +M        + C PN VT  T++ GLC+ G +
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLFLKMQK------LGCMPNVVTCATLMKGLCQSGNI 458

Query: 116 DKAKELLLQMKDK------NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
             A EL   M         N KPN ++Y+ +I G C     +EA+ LF EM   GV P+V
Sbjct: 459 KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDV 518

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           +++  ++   C++GK  +A  L + M+  GV+PD  T++ L+D  C  G+V  A EL   
Sbjct: 519 ISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 578

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   GC     +Y+ L+ G C N  I  A  L+ +M   G  PDVV + TL  GL +   
Sbjct: 579 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGN 638

Query: 290 VERAFKLFDEMQRN------GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           ++ A +L  +M  +          D  +Y   IDGLCK+G   EA ELF  ++ L    +
Sbjct: 639 IKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 698

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           + +Y SLI G C+SG+LE A  LF  +    +  N VTYS+MI G C +GQ+DKA  LF 
Sbjct: 699 VISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQ 756

Query: 404 DMEEN 408
            ME N
Sbjct: 757 KMEAN 761



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/379 (34%), Positives = 217/379 (57%), Gaps = 12/379 (3%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           +P+  T   +ID  CKEG V +A ELL  M  +    ++VTY+++I+G C     +EA +
Sbjct: 7   QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ 66

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI----QHGV--RPDAFTYNT 209
           LF+ M   G +P+ + +  +M  LC+ GK++ A  L   M+    Q+G+  +P   +Y+ 
Sbjct: 67  LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSI 126

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           ++DG C   R + A+ELF  M++ G    V SY+ LI+G+C++ + E A  L++EML  G
Sbjct: 127 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG 186

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           I+ DV   + L   L +  +V  A +L + M + G   D  TY T I GLC    I EA 
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEAT 246

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL-----PCGVLV-PNVVTYS 383
            LF +++ L C  D  AY +L+ GLC++G +  AL+L + +       G+   P +++YS
Sbjct: 247 RLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYS 306

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           I+I GLC D + D+AR+LF +M+   ++P+VI++  LI GF    +  K   L ++M ++
Sbjct: 307 IIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 366

Query: 444 NVMPDASIVSIVVDLLAKN 462
            + PD +  S+++D+L K 
Sbjct: 367 GIQPDVTTSSVLIDMLCKK 385



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/426 (31%), Positives = 226/426 (53%), Gaps = 19/426 (4%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G +PDV T   L++  C+    I A  L E M          C  + VTY+T+I GLC +
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRG------CILDIVTYSTLIKGLCMK 58

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ------ 166
             + +A +L + MK    +P+ + Y ++++G C     N A  L  EM++   Q      
Sbjct: 59  HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCK 118

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P +V++++I+D LCK+ + DEA  L   M   G+ PD  +Y +L+ GFC +G+   AK L
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           F  M  +G +  V + S+LI+  CK  ++  A  L   M+ +G   D+V ++TL  GL  
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL------RILKC 340
            H++  A +LF  MQ+ G   D   Y T + GLC+ G I  A++L   +        +KC
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           +  + +Y+ +IDGLCK  R + A ELF+ +    ++P+V++Y+ +I G C  G+ +KA+ 
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVDLL 459
           LF +M +  + P+V T  +LI    +  +  +  +LL  + +   +PD  +  ++V  L 
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418

Query: 460 AKNEIS 465
            K+ IS
Sbjct: 419 MKHRIS 424


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  343 bits (879), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/457 (37%), Positives = 274/457 (59%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD VTFT+L+ GL   ++  EA AL  ++ V GC+PD+ TY 
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++NGLC+     +ALNL  +M  G        E + V Y+T+ID LCK   VD A  L 
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGK------IEADVVIYSTVIDSLCKYRHVDDALNLF 263

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +K I+P+V TY+S+I   C    W++A RL  +M+++ + PNVVTFN ++D   K 
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L D MIQ  + P+  TYN+L++GFC+  R++ A+++F  M S  C   V +Y
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LING+CK K++   + L+ +M  +G+  + V + TL  G F+    + A  +F +M  
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  +  TY T +DGLCKNG + +A+ +F  L+  K E DI  YN + +G+CK+G++E 
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF SL    + P+V+ Y+ MI G C  G  ++A  LF+ M+E+  +P+  T++ LIR
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+      DAS   +V D+L
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 234/453 (51%), Gaps = 8/453 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G ++KS   P  V F+ L+  +    +     +   K+ + G   +++TY  ++N LC
Sbjct: 52  LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111

Query: 70  RTSHTIVALNLFEEMAN-GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           R S    AL +  +M   G G       P+ VT  ++++G C    + +A  L+ QM + 
Sbjct: 112 RRSQLSFALAILGKMMKLGYG-------PSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             +P+ VT+T+++ G       +EA  L   M+ +G QP++VT+  +++ LCK G+ D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             LL+ M +  +  D   Y+T++D  C    V+ A  LF  M++ G +  VF+YS LI+ 
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C       A  L S+ML + I P+VV  N+L     +  ++  A KLFDEM +  +  +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY + I+G C +  + EA ++F  +    C  D+  YN+LI+G CK+ ++   +ELFR
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    LV N VTY+ +I G       D A+ +F  M  + V PN++T++ L+ G  +  
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  K + +   +++  + PD    +I+ + + K
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 217/425 (51%), Gaps = 6/425 (1%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           ++ EA  LF ++      P +  ++ L++ + +     + ++  E+M       GV    
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME----ILGV--SH 98

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  TY  +I+ LC+   +  A  +L +M      P++VT  S++ GFC+    +EA  L 
Sbjct: 99  NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M++ G QP+ VTF  ++  L ++ K  EA  L++ M+  G +PD  TY  +++G C  
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G  + A  L   ME    +  V  YS +I+  CK + ++ AL+L++EM +KGI+PDV  +
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           ++L   L    +   A +L  +M    +  +  T+ + ID   K G ++EA +LF  +  
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              + +I  YNSLI+G C   RL+ A ++F  +     +P+VVTY+ +I G C   ++  
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +LF DM    +V N +T+  LI GF + ++      +  +M    V P+    + ++D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458

Query: 458 LLAKN 462
            L KN
Sbjct: 459 GLCKN 463



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 167/318 (52%), Gaps = 6/318 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +L+    P+ VTF SLI     E +++EA  LF ++     +P++ TY
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NG C       A  +F  M + +      C P+ VTY T+I+G CK   V    EL
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDVVTYNTLINGFCKAKKVVDGMEL 402

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  + +  N VTYT++I GF  A D + A+ +F +M+  GV PN++T+N ++D LCK
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NGK+++A  + + + +  + PD +TYN + +G C  G+V    +LF S+   G K  V +
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G+CK    E A +L+ +M   G  PD   +NTL            + +L  EM+
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582

Query: 302 RNGVAADTWTYRTFIDGL 319
               A D  TY    D L
Sbjct: 583 SCRFAGDASTYGLVTDML 600



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 188/361 (52%), Gaps = 6/361 (1%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D+A +L  +M      P++V ++ ++      K ++       +M   GV  N+ T+N+
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++ LC+  ++  A  +L  M++ G  P   T N+LL+GFC   R++ A  L   M  MG
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            +    +++ L++G  ++ +   A++L   M+ KG +PD+V +  +  GL +  + + A 
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            L ++M++  + AD   Y T ID LCK  ++ +A+ LF  +       D+  Y+SLI  L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C  GR   A  L   +    + PNVVT++ +I     +G++ +A  LF +M + ++ PN+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345

Query: 415 ITFDMLIRGFI---RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
           +T++ LI GF    R++E  ++  L   M   + +PD    + +++   K +  ++ +  
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTL---MVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402

Query: 472 F 472
           F
Sbjct: 403 F 403


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 179/472 (37%), Positives = 282/472 (59%), Gaps = 7/472 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTY 61
           R+   F VL   LK+    + VTF +L+ GL AE+++ +A  LF KL R   CEP+   Y
Sbjct: 112 RIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMY 171

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++NGL +  HT   L+L   M  GN       +P+  TY+ +ID LCK+  +D A  L
Sbjct: 172 GTVMNGLSKRGHTEKTLSLLRIMEQGN------TKPDVRTYSIVIDALCKDINLDAAINL 225

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK KNI PN+ TY S+I G C    W + K L  EM++  + PNV TF++++D LCK
Sbjct: 226 LNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCK 285

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++A  ++  MI+ GV PD  TY+ ++DG+CL G+V+ A+ +F  +   G K  +FS
Sbjct: 286 EGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS 345

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILINGYCK K +  A+ L+ E+  KG+KPD V ++T+  GL E+ ++  A K+FDEM 
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEML 405

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G   D   + T + G  K G + EA+ LF  L   + + +I  Y  +I+GLCK+ R+ 
Sbjct: 406 RVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVR 465

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +F  LP   L+P+V TY++MI G C +G  D+ + +   ME+N    N IT+++++
Sbjct: 466 EAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIM 525

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           +GF R N+ S+++  + +M       DA+   +++++L +N   ++ +P  +
Sbjct: 526 QGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMIPDHS 577



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 171/343 (49%), Gaps = 1/343 (0%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D A  L  +M      P+V+ ++ + +     K ++    LF EM   G+  +    N+
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESM 233
           + +  C   ++D A  +L + ++ G+  +  T+NTLL G     +V  A  LF  +    
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
            C+     Y  ++NG  K    E  LSL   M     KPDV  ++ +   L +   ++ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             L +EM++  +  + +TY + IDGLCK G   +   L   +  L    ++  ++ LIDG
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCK G++E A E+ R +    + P+++TYS ++ G C  GQ+D+AR +F  + +  + PN
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           + ++ +LI G+ +    +K ++L  ++ +  + PD    S ++
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTIL 385



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 145/279 (51%), Gaps = 6/279 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     V+  +++    PD +T+++++ G C   ++  A  +F  LR  G +P++F+Y
Sbjct: 287 GKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSY 346

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+NG C+  +   A+ LF E++          +P+TVTY+TI+ GL + G +  AK++
Sbjct: 347 SILINGYCKKKNLAKAMQLFGEISQKG------LKPDTVTYSTILHGLIEVGRIGDAKKI 400

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M      P++  +++++ G+       EA  LF ++       N+  + V+++ LCK
Sbjct: 401 FDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCK 460

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N ++ EA  + + +   G+ PD  TYN ++ GFC  G  +  K +   ME  GC     +
Sbjct: 461 NDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNIT 520

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           Y++++ G+ ++ +I   +S   EM  +G   D      L
Sbjct: 521 YNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVL 559


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  342 bits (878), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 178/464 (38%), Positives = 274/464 (59%), Gaps = 7/464 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+   F VL +ILK    PD  TFT+LI+GLC E +I +A  LF K+   G +P+V T
Sbjct: 117 LNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT 176

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+  +T  A+ L   M  GN      C+P+ V YT+IID LCK+  V +A  
Sbjct: 177 YGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVVVYTSIIDSLCKDRQVTEAFN 230

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P++ TYTS+I   C   +W     L  +M++  + P+VV F+ ++D LC
Sbjct: 231 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC 290

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  ++D+MI  GV P+  TYN L+DG CL   ++ A ++F +M   G    V 
Sbjct: 291 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 350

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LINGYCK + ++ A  L+ EM  K + P+ V +NTL +    + +++ A  LF EM
Sbjct: 351 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL-MHXCHVGRLQDAIALFHEM 409

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G   D  TYR  +D LCK  ++ EA+ L  T+     + DI+ Y  +IDG+C++G L
Sbjct: 410 VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGEL 469

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A ++F +L    L PNV TY+IMI GLC  G +D+A  LF++M+ N   P+  T++ +
Sbjct: 470 EAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTI 529

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
            +G ++  E  + I+LL +M       D S  +++V++L  +++
Sbjct: 530 TQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKL 573



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 242/449 (53%), Gaps = 7/449 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T   LI   C  +R+  A ++  K+   G +PD  T+TTL+ GLC       AL+L
Sbjct: 102 PDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHL 161

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F++M       G   +PN VTY T+I+GLCK G  + A  LL  M+  N +P+VV YTS+
Sbjct: 162 FDKM------IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSI 215

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  +   EA  LF +M+ QG+ P++ T+  ++  LC   +    + LL+ MI   +
Sbjct: 216 IDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI 275

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD   ++T++D  C  G++  A ++   M   G +  V +Y+ L++G+C   E++ A+ 
Sbjct: 276 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVK 335

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++  M+  G  P+V+ +NTL  G  +I ++++A  LF+EM +  +  +T TY T +   C
Sbjct: 336 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XC 394

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G + +A+ LFH +       D+  Y  L+D LCK   L+ A+ L +++    + P++ 
Sbjct: 395 HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 454

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+I+I G+C  G+++ ARD+F ++    + PNV T+ ++I G  R     +  +L  +M
Sbjct: 455 IYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 514

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSL 469
                 PD    + +   L +N+ +L ++
Sbjct: 515 DGNGCSPDGCTYNTITQGLLQNKEALRAI 543



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 189/365 (51%), Gaps = 1/365 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TV +  ++  + K         L  QM    I P+V T   +I  FC+      A  +
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TF  ++  LC  GK+ +A  L D MI  G +P+  TY TL++G C 
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  N A  L  SME   C+  V  Y+ +I+  CK++++  A +L+S+M+ +GI PD+  
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +L   L  + + +    L ++M  + +  D   + T +D LCK G I EA ++   + 
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
           I   E ++  YN+L+DG C    ++ A+++F ++      PNV++Y+ +I G C   +MD
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  LF +M +  ++PN +T++ L+     +      I L H+M     +PD +   I++
Sbjct: 367 KATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 425

Query: 457 DLLAK 461
           D L K
Sbjct: 426 DYLCK 430



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 139/297 (46%), Gaps = 40/297 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++    V+  ++     P+ VT+ +L+ G C +S + EA  +F  +   G  P+V +Y
Sbjct: 293 GKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 352

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI---------------- 105
            TL+NG C+      A  LFEEM            PNTVTY T+                
Sbjct: 353 NTLINGYCKIQRMDKATYLFEEMCQKE------LIPNTVTYNTLMHXCHVGRLQDAIALF 406

Query: 106 ------------------IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                             +D LCK+  +D+A  LL  ++  N+ P++  YT VI G C A
Sbjct: 407 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
            +   A+ +F  +  +G++PNV T+ ++++ LC+ G +DEA++L   M  +G  PD  TY
Sbjct: 467 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 526

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
           NT+  G         A +L   M + G    V + ++L+   C +K  +    + SE
Sbjct: 527 NTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 3/256 (1%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + M+     P    +N LL     T +      L   M+S G    V++ +I
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C    +  A S+ +++L  G +PD     TL  GL    ++  A  LFD+M   G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY T I+GLCK G    A+ L  ++    C+ D+  Y S+ID LCK  ++  A 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ +I  LCN  +      L   M  + ++P+V+ F  ++   
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 425 I---RINEPSKVIELL 437
               +I E   V++++
Sbjct: 290 CKEGKITEAHDVVDMM 305



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 99/190 (52%), Gaps = 7/190 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +   ++     PD  T+  L+  LC +S + EA AL   +     +PD+  
Sbjct: 396 VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 455

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++G+CR      A ++F  +++          PN  TYT +I+GLC+ G +D+A +
Sbjct: 456 YTIVIDGMCRAGELEAARDIFSNLSSKG------LRPNVRTYTIMINGLCRRGLLDEANK 509

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L ++M      P+  TY ++ +G    K+   A +L  EM+ +G   +V T  ++++ LC
Sbjct: 510 LFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569

Query: 181 KNGKMDEASR 190
            + K+D++ +
Sbjct: 570 DD-KLDQSVK 578


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  342 bits (878), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 173/457 (37%), Positives = 275/457 (60%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD +TFT+LI GL   ++  EA AL  ++   GC+P++ TY 
Sbjct: 132 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 191

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VNGLC+   T +ALNL  +M           E + V + TIID LCK   VD A  L 
Sbjct: 192 VVVNGLCKRGDTDLALNLLNKMEAAK------IEADVVIFNTIIDSLCKYRHVDDALNLF 245

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K I+PNVVTY+S+I   C    W++A +L  +M+++ + PN+VTFN ++D   K 
Sbjct: 246 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 305

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA +L D MI+  + PD FTYN+L++GFC+  R++ AK++F  M S  C   V +Y
Sbjct: 306 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 365

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+CK+K +E    L+ EM  +G+  D V + TL  GLF     + A K+F +M  
Sbjct: 366 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 425

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLC NG + +A+E+F  ++  + + DI  Y ++I+G+CK+G+++ 
Sbjct: 426 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 485

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF SL    + PNVVTY+ MI GLC+   + +A  L   M+E+  +PN  T++ LIR
Sbjct: 486 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 545

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+    + DAS + +V ++L
Sbjct: 546 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 582



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 233/452 (51%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G ++KS   P  V F  L+  +    +     +L  K++       ++TY  L+N  C
Sbjct: 34  LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 93

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R S   +AL L  +M     + G   EP+ VT +++++G C    +  A  L+ QM +  
Sbjct: 94  RRSQISLALALLGKMM----KLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +P+ +T+T++I G       +EA  L   M+ +G QPN+VT+ V+++ LCK G  D A 
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL+ M    +  D   +NT++D  C    V+ A  LF  ME+ G +  V +YS LI+  
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C       A  L S+M+ K I P++V  N L     +  +   A KL+D+M +  +  D 
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +TY + ++G C +  + +A ++F  +    C  D+  YN+LI G CKS R+E   ELFR 
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 387

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    LV + VTY+ +I GL +DG  D A+ +F  M  + V P+++T+ +L+ G     +
Sbjct: 388 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 447

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             K +E+   M++  +  D  I + +++ + K
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 479



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 224/467 (47%), Gaps = 41/467 (8%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+  LI   C  S+I  A AL  K+   G EP + T ++L+NG C       A+ L ++M
Sbjct: 84  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                E G    P+T+T+TT+I GL       +A  L+ +M  +  +PN+VTY  V+ G 
Sbjct: 144 V----EMGY--RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 197

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C   D + A  L  +M    ++ +VV FN I+D LCK   +D+A  L   M   G+RP+ 
Sbjct: 198 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 257

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY++L+   C  GR + A +L   M        + +++ LI+ + K  +   A  LY +
Sbjct: 258 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 317

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+ + I PD+  +N+L  G     ++++A ++F+ M       D  TY T I G CK+  
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 377

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + +  ELF  +       D   Y +LI GL   G  + A ++F+ +    + P+++TYSI
Sbjct: 378 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 437

Query: 385 MIGGLCNDGQMDKA-----------------------------------RDLFLDMEENA 409
           ++ GLCN+G+++KA                                    DLF  +    
Sbjct: 438 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 497

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           V PNV+T++ +I G        +   LL KMKE   +P++   + ++
Sbjct: 498 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 544



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 229/461 (49%), Gaps = 6/461 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+  +  +  +++    + ++ +A  LF  +      P +  +  L++ + +     V +
Sbjct: 8   FSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVI 67

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L E+M       G+       TY  +I+  C+   +  A  LL +M     +P++VT +
Sbjct: 68  SLGEKMQRLEIVHGLY------TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 121

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S++ G+C+ K  ++A  L  +M++ G +P+ +TF  ++  L  + K  EA  L+D M+Q 
Sbjct: 122 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 181

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G +P+  TY  +++G C  G  + A  L   ME+   +  V  ++ +I+  CK + ++ A
Sbjct: 182 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 241

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+L+ EM +KGI+P+VV +++L   L    +   A +L  +M    +  +  T+   ID 
Sbjct: 242 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 301

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             K G  VEA +L+  +     + DI  YNSL++G C   RL+ A ++F  +      P+
Sbjct: 302 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 361

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVTY+ +I G C   +++   +LF +M    +V + +T+  LI+G     +     ++  
Sbjct: 362 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 421

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           +M    V PD    SI++D L  N     +L  F   ++ E
Sbjct: 422 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 462



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 165/310 (53%), Gaps = 6/310 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +++    P+ VTF +LI     E + +EA  L+  +     +PD+FTY
Sbjct: 271 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 330

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +LVNG C       A  +FE M + +      C P+ VTY T+I G CK   V+   EL
Sbjct: 331 NSLVNGFCMHDRLDKAKQMFEFMVSKD------CFPDVVTYNTLIKGFCKSKRVEDGTEL 384

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  + VTYT++I+G  +  D + A+++F +M+  GV P+++T+++++D LC 
Sbjct: 385 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 444

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NGK+++A  + D M +  ++ D + Y T+++G C  G+V+   +LF S+   G K  V +
Sbjct: 445 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 504

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G C  + ++ A +L  +M   G  P+   +NTL            + +L  EM+
Sbjct: 505 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 564

Query: 302 RNGVAADTWT 311
                 D  T
Sbjct: 565 SCRFVGDAST 574


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  342 bits (877), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 174/457 (38%), Positives = 275/457 (60%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD VTF +LI GL   ++  EA AL  ++   GC+PD+ TY 
Sbjct: 165 RISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 224

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VNGLC+     +AL+L ++M  G        E + V Y TIIDGLCK   +D A  L 
Sbjct: 225 AVVNGLCKRGDIDLALSLLKKMEKGK------IEADVVIYNTIIDGLCKYKHIDDAFALF 278

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K I+P+V TY S+I   C    W++A RL   M+++ + PNVVTF+ ++D   K 
Sbjct: 279 NKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKE 338

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L D MI+  + PD FTY++L++GFC+  R++ AK +F  M S  C   V +Y
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+CK K +E  + L+ EM  +G+  + V +NTL  GLF+    + A K+F +M  
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLCK G + +A+ +F  L+  K E DI  YN +I+G+CK+G++E 
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF SL    + PNV+ Y+ MI G C  G  ++A  LF +M+E+  +P+   ++ LIR
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 578

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+    + DAS +S+V+++L
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 235/452 (51%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G +++S   P  V F  L+  +    +     +L  +++      D+++Y  L+N  C
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFC 126

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R S   +AL +  +M     + G   EP+ VT +++++G C    +  A  L+ QM +  
Sbjct: 127 RRSQLPLALAVLGKMM----KLGY--EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            KP+ VT+ ++I G       +EA  L  +M+ +G QP++VT+  +++ LCK G +D A 
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M +  +  D   YNT++DG C    ++ A  LF  ME+ G +  VF+Y+ LI+  
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C       A  L S M+ + I P+VV  + L     +  ++  A KL+DEM +  +  D 
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +TY + I+G C +  + EA  +F  +    C  ++  YN+LI G CK+ R+E  +ELFR 
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    LV N VTY+ +I GL   G  D A+ +F  M  + V P++IT+ +L+ G  +  +
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             K + +   +++  + PD    +I+++ + K
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 204/397 (51%), Gaps = 7/397 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L ++ K     D V + ++I GLC    I +A ALF K+   G  PDVFTY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++ LC       A  L   M            PN VT++ +ID   KEG + +A++L
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMIERK------INPNVVTFSALIDAFVKEGKLVEAEKL 347

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I P++ TY+S+I GFC     +EAK +F  M+ +   PNVVT+N ++   CK
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++E   L   M Q G+  +  TYNTL+ G    G  + A+++F  M S G    + +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL++G CK  ++E AL ++  +    ++PD+  +N +  G+ +  +VE  + LF  + 
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  +   Y T I G C+ G   EA  LF  ++      D   YN+LI    + G   
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKA 587

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            + EL + +     V +  T S++I  L +DG+++K+
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 177/328 (53%), Gaps = 10/328 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +++    P+ VTF++LI     E +++EA  L+ ++     +PD+FTY
Sbjct: 304 GRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L+NG C       A ++FE M + +      C PN VTY T+I G CK   V++  EL
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  N VTY ++I+G   A D + A+++F +M+  GV P+++T+++++D LCK
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++A  + + + +  + PD +TYN +++G C  G+V    +LF S+   G K  V  
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G+C+    E A +L+ EM   G  PD   +NTL            + +L  EM+
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMR 597

Query: 302 RNGVAADTWTYRTFI----DGLCKNGYI 325
             G   D  T    I    DG  +  Y+
Sbjct: 598 SCGFVGDASTISMVINMLHDGRLEKSYL 625



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 162/307 (52%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           ++A  LF EM+     P++V FN ++  + K  K D    L + M    +  D ++YN L
Sbjct: 62  DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNIL 121

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ FC   ++  A  +   M  +G +  + + S L+NGYC +K I  A++L  +M+  G 
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 181

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           KPD V  NTL  GLF  ++   A  L D+M + G   D  TY   ++GLCK G I  A+ 
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +   K E D+  YN++IDGLCK   ++ A  LF  +    + P+V TY+ +I  LC
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
           N G+   A  L  +M E  + PNV+TF  LI  F++  +  +  +L  +M + ++ PD  
Sbjct: 302 NYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361

Query: 451 IVSIVVD 457
             S +++
Sbjct: 362 TYSSLIN 368



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 171/326 (52%), Gaps = 3/326 (0%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D A  L  +M      P++V +  ++      K ++    L   M +  +  ++ ++N+
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++  C+  ++  A  +L  M++ G  PD  T ++LL+G+C + R++ A  L   M  MG
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            K    +++ LI+G   + +   A++L  +M+ +G +PD+V +  +  GL +   ++ A 
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            L  +M++  + AD   Y T IDGLCK  +I +A  LF+ +       D+  YNSLI  L
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C  GR   A  L  ++    + PNVVT+S +I     +G++ +A  L+ +M + ++ P++
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 415 ITFDMLIRGFI---RINEPSKVIELL 437
            T+  LI GF    R++E   + EL+
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELM 386



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 10/294 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +   ++K    PD  T++SLI G C   R+ EA  +F  +    C P+V TY
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ G C+       + LF EM+    + G+V   NTVTY T+I GL + G  D A+++
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMS----QRGLV--GNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + P+++TY+ ++ G C      +A  +F  +    ++P++ T+N++++ +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++   L   +   GV+P+   Y T++ GFC  G    A  LF  M+  G       
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 572

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDV----VIHNTLFVGLFEIHQVE 291
           Y+ LI    ++ +   +  L  EM S G   D     ++ N L  G  E   +E
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 173/457 (37%), Positives = 275/457 (60%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD +TFT+LI GL   ++  EA AL  ++   GC+P++ TY 
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VNGLC+   T +ALNL  +M           E + V + TIID LCK   VD A  L 
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAK------IEADVVIFNTIIDSLCKYRHVDDALNLF 283

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K I+PNVVTY+S+I   C    W++A +L  +M+++ + PN+VTFN ++D   K 
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA +L D MI+  + PD FTYN+L++GFC+  R++ AK++F  M S  C   V +Y
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+CK+K +E    L+ EM  +G+  D V + TL  GLF     + A K+F +M  
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLC NG + +A+E+F  ++  + + DI  Y ++I+G+CK+G+++ 
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF SL    + PNVVTY+ MI GLC+   + +A  L   M+E+  +PN  T++ LIR
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+    + DAS + +V ++L
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 233/452 (51%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G ++KS   P  V F  L+  +    +     +L  K++       ++TY  L+N  C
Sbjct: 72  LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R S   +AL L  +M     + G   EP+ VT +++++G C    +  A  L+ QM +  
Sbjct: 132 RRSQISLALALLGKMM----KLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +P+ +T+T++I G       +EA  L   M+ +G QPN+VT+ V+++ LCK G  D A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL+ M    +  D   +NT++D  C    V+ A  LF  ME+ G +  V +YS LI+  
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C       A  L S+M+ K I P++V  N L     +  +   A KL+D+M +  +  D 
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +TY + ++G C +  + +A ++F  +    C  D+  YN+LI G CKS R+E   ELFR 
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    LV + VTY+ +I GL +DG  D A+ +F  M  + V P+++T+ +L+ G     +
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             K +E+   M++  +  D  I + +++ + K
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 224/467 (47%), Gaps = 41/467 (8%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+  LI   C  S+I  A AL  K+   G EP + T ++L+NG C       A+ L ++M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                E G    P+T+T+TT+I GL       +A  L+ +M  +  +PN+VTY  V+ G 
Sbjct: 182 V----EMGY--RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C   D + A  L  +M    ++ +VV FN I+D LCK   +D+A  L   M   G+RP+ 
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY++L+   C  GR + A +L   M        + +++ LI+ + K  +   A  LY +
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+ + I PD+  +N+L  G     ++++A ++F+ M       D  TY T I G CK+  
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + +  ELF  +       D   Y +LI GL   G  + A ++F+ +    + P+++TYSI
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475

Query: 385 MIGGLCNDGQMDKA-----------------------------------RDLFLDMEENA 409
           ++ GLCN+G+++KA                                    DLF  +    
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           V PNV+T++ +I G        +   LL KMKE   +P++   + ++
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 232/473 (49%), Gaps = 10/473 (2%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G    GR     F+  +  +  +++    + ++ +A  LF  +      P +  +  L++
Sbjct: 38  GMCYWGR----AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLS 93

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            + +     V ++L E+M       G+       TY  +I+  C+   +  A  LL +M 
Sbjct: 94  AIAKMKKFDVVISLGEKMQRLEIVHGLY------TYNILINCFCRRSQISLALALLGKMM 147

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
               +P++VT +S++ G+C+ K  ++A  L  +M++ G +P+ +TF  ++  L  + K  
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA  L+D M+Q G +P+  TY  +++G C  G  + A  L   ME+   +  V  ++ +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +  CK + ++ AL+L+ EM +KGI+P+VV +++L   L    +   A +L  +M    + 
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  T+   ID   K G  VEA +L+  +     + DI  YNSL++G C   RL+ A ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  +      P+VVTY+ +I G C   +++   +LF +M    +V + +T+  LI+G   
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
             +     ++  +M    V PD    SI++D L  N     +L  F   ++ E
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 165/310 (53%), Gaps = 6/310 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +++    P+ VTF +LI     E + +EA  L+  +     +PD+FTY
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +LVNG C       A  +FE M + +      C P+ VTY T+I G CK   V+   EL
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKD------CFPDVVTYNTLIKGFCKSKRVEDGTEL 422

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  + VTYT++I+G  +  D + A+++F +M+  GV P+++T+++++D LC 
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NGK+++A  + D M +  ++ D + Y T+++G C  G+V+   +LF S+   G K  V +
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G C  + ++ A +L  +M   G  P+   +NTL            + +L  EM+
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602

Query: 302 RNGVAADTWT 311
                 D  T
Sbjct: 603 SCRFVGDAST 612


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  339 bits (869), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/451 (38%), Positives = 273/451 (60%), Gaps = 6/451 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           + K    P  VTF +L+ GLC++++IM+A  LF ++   G EPDV TY+T++NGLC+  +
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
           T +AL L ++M          C+PN V Y TIID LCK+  V +A +   +M  + I P+
Sbjct: 61  TTMALQLLKKMEEKG------CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPD 114

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V TY+S++ GFC     NEA  LF +M+++ V PN VTF +++D LCK   + EA  + +
Sbjct: 115 VFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFE 174

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M + G+ PD +TYN L+DG+C   +++ A++LF  M+  GC   V SY+ILING+CK+ 
Sbjct: 175 TMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSG 234

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            I+ A  L +EM  K + PD+  ++TL  G  ++ + + A +L  EM   G+  +  TY 
Sbjct: 235 RIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYS 294

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             +DGLCK+G++ EA EL   ++  K E +I  Y  LI+G+C  G+LE A ELF +L   
Sbjct: 295 IVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVK 354

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + P VVTY++MI GL   G  ++A +LF +M  N  +PN  T++++I+GF+R  +    
Sbjct: 355 GIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNA 414

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           + L+ +M       D+S   ++ DL + +EI
Sbjct: 415 VRLIEEMVGKGFSADSSTFRMLSDLESSDEI 445



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 233/418 (55%), Gaps = 6/418 (1%)

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
            G +P + T+ TL++GLC  +  + A+ LF+EM     E      P+ +TY+TII+GLCK
Sbjct: 4   LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHE------PDVITYSTIINGLCK 57

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G    A +LL +M++K  KPNVV Y ++I   C  +   EA   F EM+ +G+ P+V T
Sbjct: 58  MGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFT 117

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           ++ I+   C  G+++EA+ L   M++  V P+  T+  L+DG C    ++ A  +F +M 
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G +  V++Y+ L++GYC   +++ A  L++ M  KG  P+V  +N L  G  +  +++
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A  L  EM    +  D +TY T + G C+ G   EA EL   +       ++  Y+ ++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DGLCK G L+ A EL +++    + PN+  Y+I+I G+C  G+++ AR+LF ++    + 
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           P V+T+ ++I G ++    ++  EL  +M     +P++   ++++    +N  + N++
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAV 415



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 205/375 (54%)

Query: 91  FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
           F +  +P  VT+ T++ GLC +  +  A +L  +M     +P+V+TY+++I G C   + 
Sbjct: 2   FKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNT 61

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
             A +L  +M ++G +PNVV +N I+D LCK+  + EA      M++ G+ PD FTY+++
Sbjct: 62  TMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSI 121

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           L GFC  GRVN A  LF  M          +++ILI+G CK + I  A  ++  M  KG+
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGL 181

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +PDV  +N L  G     Q++ A KLF+ M R G A +  +Y   I+G CK+G I EA  
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +       DI  Y++L+ G C+ GR + A EL + +    L+PN++TYSI++ GLC
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             G +D+A +L   M+E+ + PN+  + +LI G     +     EL   +    + P   
Sbjct: 302 KHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVV 361

Query: 451 IVSIVVDLLAKNEIS 465
             ++++  L K  +S
Sbjct: 362 TYTVMISGLLKGGLS 376



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 202/370 (54%), Gaps = 6/370 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG  +    +L ++ +    P+ V + ++I  LC +  + EA   F+++   G  PDVFT
Sbjct: 58  MGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFT 117

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+++++G C       A +LF++M   N    V+  PN VT+T +IDGLCK+  + +A  
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERN----VI--PNKVTFTILIDGLCKKRMISEAWL 171

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M +K ++P+V TY +++ G+C     +EA++LF  M  +G  PNV ++N++++  C
Sbjct: 172 VFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHC 231

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G++DEA  LL  M    + PD FTY+TL+ GFC  GR   A+EL   M S G    + 
Sbjct: 232 KSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLI 291

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YSI+++G CK+  ++ A  L   M    I+P++ I+  L  G+    ++E A +LF  +
Sbjct: 292 TYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNL 351

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     TY   I GL K G   EA ELF  + +  C  +   YN +I G  ++G  
Sbjct: 352 FVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDT 411

Query: 361 EIALELFRSL 370
             A+ L   +
Sbjct: 412 PNAVRLIEEM 421



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 112/317 (35%), Positives = 175/317 (55%), Gaps = 6/317 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV+    +  ++++    P+ VTFT LI GLC +  I EA  +F  +   G EPDV+T
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  LV+G C  S    A  LF  M          C PN  +Y  +I+G CK G +D+AK 
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFNIMDRKG------CAPNVRSYNILINGHCKSGRIDEAKG 241

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  K++ P++ TY++++RGFC      EA+ L  EM   G+ PN++T+++++D LC
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G +DEA  LL  M +  + P+ F Y  L++G C  G++  A+ELF ++   G + TV 
Sbjct: 302 KHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVV 361

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I+G  K      A  L+ EM   G  P+   +N +  G         A +L +EM
Sbjct: 362 TYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421

Query: 301 QRNGVAADTWTYRTFID 317
              G +AD+ T+R   D
Sbjct: 422 VGKGFSADSSTFRMLSD 438



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 55/99 (55%)

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           L P +VT++ ++ GLC+  ++  A  LF +M +    P+VIT+  +I G  ++   +  +
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           +LL KM+E    P+    + ++D L K+ +   ++  F+
Sbjct: 66  QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFS 104


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  338 bits (866), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 183/488 (37%), Positives = 286/488 (58%), Gaps = 31/488 (6%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           LK  F PDAVT T+L+KG+  E+ I +A  LF ++   G   D  TY  L+NGLC+   T
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 75  IVALNLFEEM-ANGNGE---FGVVCE------------------------PNTVTYTTII 106
            +A+ L E+M  N  G+   +G++ +                        P+ V Y++++
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           DGLC+ G + +A E   +M+ + I  +V TY S+I G   A  W E       M+D+G  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P+  TF +++D LCK GK+ EA ++L+LM   G  PD  TYNTL++G CL G++  A +L
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           F S+   G K  VFSY+ILINGYCK+++I+ A  L+ EM  KG+KP  V +NTL   L +
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
             +V  A KLF EMQ  G      TY   +DGLCKNG++ EA++LF +++  + + +I  
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           ++ L+DG+C++G+LE A + F  +    L P+ + Y+I+I GLCN G + +A  L   ME
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA---KNE 463
           E   +P+ ITF+++I+  ++ NE  + I+LL +M+  N  PD ++ S+++ L +   +  
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWH 548

Query: 464 ISLNSLPS 471
            +L SLP+
Sbjct: 549 AALVSLPN 556



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 210/388 (54%), Gaps = 12/388 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  +    +   ++ +   PD V ++SL+ GLC   R+ EA   F ++   G   DV+TY
Sbjct: 160 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 219

Query: 62  TTLVNGLCRTS---HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            +L++GL R          LNL  +             P+  T+T +IDGLCKEG V +A
Sbjct: 220 NSLIHGLSRAGLWKEVTWFLNLMVDRG---------FSPDAFTFTILIDGLCKEGKVGEA 270

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           +++L  M  K  +P+++TY +++ G C      +A +LF  + D+G++ NV ++N++++ 
Sbjct: 271 QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 330

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            CK+ K+DEA RL + M   G++P   TYNTL+   C +GRV  A++LFV M++ G    
Sbjct: 331 YCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 390

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           + +Y +L++G CKN  +E A+ L+  +     KP++ + + L  G+    ++E A+K FD
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 450

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           E+ +NG+  DT  Y   I+GLC  G + EAV+L   +    C  D   +N +I  L K  
Sbjct: 451 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 510

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMI 386
            +  A++L   +      P+    S+++
Sbjct: 511 EIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 6/164 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +   I K+   P+   F+ L+ G+C   ++ EA   F ++   G EPD   Y
Sbjct: 405 GHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAY 464

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGLC       A+ L  +M          C P+++T+  II  L KE  + +A +L
Sbjct: 465 NILINGLCNKGMLSEAVKLLWQMEEKG------CLPDSITFNVIIQNLLKENEIHEAIQL 518

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           L +M+++N  P+    + ++    +   W+ A       + +GV
Sbjct: 519 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 562



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+ VT + ++ G+  +  +  A  LF +M E  +  +  T+ +LI G  +  +    I+L
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
             KMK  N   D     +++D L K+ ++  +L  F+
Sbjct: 135 HEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFS 170


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  338 bits (866), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 172/457 (37%), Positives = 269/457 (58%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD  TFT+LI GL   ++  EA AL  ++   GC+PD+ TY 
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+VNGLC+     +AL+L ++M  G        E + V Y TIIDGLCK   +D A  L 
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGK------IEADVVIYNTIIDGLCKYKHMDDALNLF 281

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +K I+P+V TY+S+I   C    W++A RL  +M+++ + PNVVTF+ ++D   K 
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L D MI+  + PD FTY++L++GFC+  R++ AK +F  M S  C   V +Y
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI G+CK K +E  + L+ EM  +G+  + V + TL  G F+    + A  +F +M  
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV  +  TY   +DGLCKNG + +A+ +F  L+    E DI  YN +I+G+CK+G++E 
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             ELF +L    + PNV+ Y+ MI G C  G  ++A  L   M+E+  +PN  T++ LIR
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  +     EL+ +M+      DAS + +V ++L
Sbjct: 582 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 238/459 (51%), Gaps = 6/459 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V     + G ++KS   P  V F  L+  +   ++     +L  +++  G   D++TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
             +N  CR S   +AL +  +M     + G   EP+ VT +++++G C    +  A  L+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMM----KLGY--EPDIVTLSSLLNGYCHSKRISDAVALV 176

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM +   KP+  T+T++I G       +EA  L  +M+ +G QP++VT+  +++ LCK 
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +D A  LL  M +  +  D   YNT++DG C    ++ A  LF  M++ G +  VF+Y
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI+  C       A  L S+M+ + I P+VV  + L     +  ++  A KL+DEM +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D +TY + I+G C +  + EA  +F  +    C  ++  Y++LI G CK+ R+E 
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            +ELFR +    LV N VTY+ +I G       D A+ +F  M    V PN++T+++L+ 
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           G  +  + +K + +   ++   + PD    +I+++ + K
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 225/428 (52%), Gaps = 12/428 (2%)

Query: 38  RIMEAAALF---TKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
           ++ +A  LF    K R F   P +  +  L++ + + +   + ++L E+M       G+ 
Sbjct: 63  KVDDAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI- 114

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
              +  TY+  I+  C+   +  A  +L +M     +P++VT +S++ G+C++K  ++A 
Sbjct: 115 -SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  +M++ G +P+  TF  ++  L  + K  EA  L+D M+Q G +PD  TY T+++G 
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G ++ A  L   ME    +  V  Y+ +I+G CK K ++ AL+L++EM +KGI+PDV
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +++L   L    +   A +L  +M    +  +  T+   ID   K G +VEA +L+  
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     + DI  Y+SLI+G C   RL+ A  +F  +      PNVVTYS +I G C   +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +++  +LF +M +  +V N +T+  LI GF +  +      +  +M  + V P+    +I
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473

Query: 455 VVDLLAKN 462
           ++D L KN
Sbjct: 474 LLDGLCKN 481



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 174/310 (56%), Gaps = 6/310 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +++    P+ VTF++LI     E +++EA  L+ ++     +PD+FTY
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L+NG C       A ++FE M + +      C PN VTY+T+I G CK   V++  EL
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  N VTYT++I GF  A+D + A+ +F +M+  GV PN++T+N+++D LCK
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NGK+ +A  + + + +  + PD +TYN +++G C  G+V    ELF ++   G    V +
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G+C+    E A SL  +M   G  P+   +NTL          E + +L  EM+
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600

Query: 302 RNGVAADTWT 311
             G A D  T
Sbjct: 601 SCGFAGDAST 610



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 209/404 (51%), Gaps = 10/404 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L ++ K     D V + ++I GLC    + +A  LFT++   G  PDVFTY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++ LC       A  L  +M            PN VT++ +ID   KEG + +A++L
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERK------INPNVVTFSALIDAFVKEGKLVEAEKL 350

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I P++ TY+S+I GFC     +EAK +F  M+ +   PNVVT++ ++   CK
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++E   L   M Q G+  +  TY TL+ GF      ++A+ +F  M S+G    + +
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+IL++G CKN ++  A+ ++  +    ++PD+  +N +  G+ +  +VE  ++LF  + 
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV+ +   Y T I G C+ G   EA  L   ++      +   YN+LI    + G  E
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            + EL + +       +  T   ++  + +DG++DK+   FLDM
Sbjct: 591 ASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS---FLDM 630



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 120/253 (47%), Gaps = 6/253 (2%)

Query: 227 FVSMESMGCKHTVFSYS------ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           F ++   GC    F+ +      IL N      +++ A+ L+ +M+     P +V  N L
Sbjct: 30  FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKL 89

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              + ++++ E    L ++MQ  G++ D +TY  FI+  C+   +  A+ +   +  L  
Sbjct: 90  LSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY 149

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           E DI   +SL++G C S R+  A+ L   +      P+  T++ +I GL    +  +A  
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L   M +    P+++T+  ++ G  +  +    + LL KM++  +  D  I + ++D L 
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269

Query: 461 KNEISLNSLPSFT 473
           K +   ++L  FT
Sbjct: 270 KYKHMDDALNLFT 282


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  336 bits (862), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 178/460 (38%), Positives = 262/460 (56%), Gaps = 6/460 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V+ GF VLG +LK    P  VTFT LI GLC +  +  A  L   +   G   DV TY  
Sbjct: 127 VAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGV 186

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+NGLC+   T  A+    +M   N        PN V Y+T++DGLCK+G V +A  L L
Sbjct: 187 LINGLCKMGKTSEAVGWLRKMEERNWN------PNVVVYSTVMDGLCKDGLVSEALGLCL 240

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M  K IKPN+VTYT +I+G C    W EA  L  EMM  GV P++ + N+++D LCK G
Sbjct: 241 EMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEG 300

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ +A  ++  MI  G  PD FTYN+L+D +CL  +++ A  +F  M S GC   + +Y+
Sbjct: 301 KIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYT 360

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G+CK K I  A+ L  EM+  G  PDVV   TL  G  ++ +   A +LF  M + 
Sbjct: 361 SLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKY 420

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  T    +DGLCK+  + EA+ LFH +     + +I  Y+ ++DG+C +G+L  A
Sbjct: 421 GQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTA 480

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           LELF  LP   L  NV  Y+IMI G    G +DKA DL  +MEEN  +P+  T+++ ++G
Sbjct: 481 LELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQG 540

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +   E ++ I+ L  M++     DA+   ++++ L+ N+
Sbjct: 541 LVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQ 580



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 210/439 (47%), Gaps = 8/439 (1%)

Query: 22  DAVTFTSLIKGLCAESR---IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +   F + ++  C   +   I EA   F  +      P V  +T L+  + +  H   A+
Sbjct: 36  NKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAI 95

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L +EM +  G      +P+T     +I+ LC    V     +L  M    ++P+VVT+T
Sbjct: 96  SLVKEMHSSLG-----IKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFT 150

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G C   D   A  L   +   G + +V T+ V+++ LCK GK  EA   L  M + 
Sbjct: 151 ILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEER 210

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
              P+   Y+T++DG C  G V+ A  L + M   G K  + +Y+ LI G C     + A
Sbjct: 211 NWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEA 270

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            SL  EM+  G+ PD+   N L   L +  ++ +A  +   M   G   D +TY + ID 
Sbjct: 271 GSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDR 330

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C    + EA  +F  +    C  DI AY SLI G CK   +  A+ L   +      P+
Sbjct: 331 YCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPD 390

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVT++ +IGG C  G+   A++LFL+M +   VPN+ T  +++ G  +    S+ + L H
Sbjct: 391 VVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFH 450

Query: 439 KMKEINVMPDASIVSIVVD 457
            M++ N+  +  I SI++D
Sbjct: 451 AMEKSNLDLNIVIYSIILD 469



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 202/420 (48%), Gaps = 6/420 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     ++  + K+ +  D  T+  LI GLC   +  EA     K+      P+V  Y
Sbjct: 160 GDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVY 219

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +T+++GLC+      AL L  EM+ G G      +PN VTYT +I GLC  G   +A  L
Sbjct: 220 STVMDGLCKDGLVSEALGLCLEMS-GKG-----IKPNLVTYTCLIQGLCNFGRWKEAGSL 273

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M    + P++ +   ++   C      +AK +   M+  G  P+V T+N ++D  C 
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 333

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +MDEA+R+ +LM+  G  PD   Y +L+ G+C    +N A  L   M  +G    V +
Sbjct: 334 QNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT 393

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI G+C+      A  L+  M   G  P++     +  GL +   +  A  LF  M+
Sbjct: 394 WTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAME 453

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++ +  +   Y   +DG+C  G +  A+ELF  L     + ++ AY  +I+G  K G L+
Sbjct: 454 KSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLD 513

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L  ++     +P+  TY++ + GL  + ++ ++      M +     +  T +M+I
Sbjct: 514 KAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMII 573



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 196/403 (48%), Gaps = 7/403 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVV 135
           ALN F  MA  N        P+ + +T ++  + K      A  L+ +M     IKP+  
Sbjct: 59  ALNFFHTMAKMNPL------PSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTF 112

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
               VI   C+ K       +   M+  G++P+VVTF ++++ LC  G +  A  L+D +
Sbjct: 113 ILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHV 172

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            + G R D  TY  L++G C  G+ + A      ME       V  YS +++G CK+  +
Sbjct: 173 EKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLV 232

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             AL L  EM  KGIKP++V +  L  GL    + + A  L DEM + GV  D  +    
Sbjct: 233 SEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNIL 292

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           +D LCK G I++A  +   + ++    D+  YNSLID  C   +++ A  +F  +     
Sbjct: 293 VDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGC 352

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           +P++V Y+ +I G C    ++KA  L  +M +    P+V+T+  LI GF ++  P    E
Sbjct: 353 LPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKE 412

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           L   M +   +P+    +I++D L K+++   +L  F   E+ 
Sbjct: 413 LFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKS 455



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 188/354 (53%), Gaps = 6/354 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+ S     L ++ +  + P+ V +++++ GLC +  + EA  L  ++   G +P++ T
Sbjct: 194 MGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVT 253

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ GLC       A +L +EM     + GV+  P+  +   ++D LCKEG + +AK 
Sbjct: 254 YTCLIQGLCNFGRWKEAGSLLDEMM----KMGVM--PDLQSLNILVDVLCKEGKIMQAKS 307

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++  M      P+V TY S+I  +C     +EA R+F  M+ +G  P++V +  ++   C
Sbjct: 308 VIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWC 367

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   +++A  LLD MI+ G  PD  T+ TL+ GFC  GR   AKELF++M   G    + 
Sbjct: 368 KIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQ 427

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +I+++G CK++ +  ALSL+  M    +  ++VI++ +  G+    ++  A +LF  +
Sbjct: 428 TCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCL 487

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
              G+  + + Y   I+G  K G + +A +L   +    C  D   YN  + GL
Sbjct: 488 PAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGL 541



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 29/212 (13%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  ++K  FTPD VT+T+LI G C   R + A  LF  +  +G  P++ T   +++GLC
Sbjct: 378 LLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLC 437

Query: 70  RTSHTIVALNLFEEMANGNGEFGVV-----------------------CEP------NTV 100
           ++     AL+LF  M   N +  +V                       C P      N  
Sbjct: 438 KSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVY 497

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            YT +I+G  K+G +DKA++LL  M++    P+  TY   ++G    ++   + +    M
Sbjct: 498 AYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMM 557

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            D+G   +  T  +I++ L  N   +E    L
Sbjct: 558 RDKGFSVDATTTEMIINYLSTNQGDNELREFL 589


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  336 bits (862), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 180/497 (36%), Positives = 288/497 (57%), Gaps = 42/497 (8%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--------------------- 53
           +KS + P+ VT ++L+KG+C E ++M+A  LF K+   G                     
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 54  --------------CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNT 99
                         C  + FTY  +++ LC+    I  L +F EM N       +C PN 
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMG-----IC-PNV 114

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           + Y+++I+GLC+ G + +A  L  +M  + IK NV+TY S+I   C    W EA R F +
Sbjct: 115 IVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQ 174

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+ +G+ P+VVTF  ++D L K GK+ EA ++ +LMI+ G  P+  TYN+LL+G CL  +
Sbjct: 175 MVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQ 234

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++HA  LF  M   G K  V SY+ LINGYC + + E A++L+ +M  + + P +  +  
Sbjct: 235 MDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTI 294

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L++  ++  A +LF+ MQ  G +    TY   +DGLCKNG I EA+++F +L+ +K
Sbjct: 295 LLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIK 354

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            +  IR Y+ LI G+ ++ R E A+E+F  +P   LVPN+VTY+IMI GLC +G++ +A 
Sbjct: 355 YKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAE 414

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            LF+ MEE+    + I+F+ +IRGF++ N+  K +E L +M+E N  P+ S+  ++V+L 
Sbjct: 415 RLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLY 474

Query: 460 AKNEISLNSLPSFTVHE 476
           A +  S + LP+  +HE
Sbjct: 475 AADAQS-SELPNNFLHE 490



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 175/336 (52%), Gaps = 6/336 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +   ++      + +T+ SLI   C      EA   F+++   G  PDV T
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +TTL++ L +      A  +FE M    GE      PN VTY ++++GLC    +D A  
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIK-QGE-----APNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M ++ IK +V++Y ++I G+C +    EA  LF +M  + + P++ T+ +++  L 
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +NG++  A  L + M   G  P   TY  LLDG C  G +  A ++F S++S+  K ++ 
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIR 360

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            YSILI G  + +  E A+ ++ E+ + G+ P++V +N +  GL +  ++  A +LF +M
Sbjct: 361 IYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQM 420

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +G   D  ++   I G  +   + +A+E    +R
Sbjct: 421 EESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMR 456


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 170/457 (37%), Positives = 270/457 (59%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++  + + P+ VTF +LI GL   ++  EA AL  ++   GC+PD+ TY 
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYG 225

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VNGLC+   T +A  L  +M  G        EP  + YTTIIDGLCK   +D A  L 
Sbjct: 226 VVVNGLCKRGDTDLAFILLNKMEQGK------LEPGVLIYTTIIDGLCKNKHMDDALNLF 279

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K I+PNVVTY+S+I   C    W++A RL  +M+++ + P+V TF+ ++D   K 
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L D M++  + P   TY++L++GFC+  R++ AK++F  M S  C   V SY
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSY 399

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI G+CK K ++  + L+ EM  +G+  + V + TL  GLF+    + A ++F EM  
Sbjct: 400 STLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS 459

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  +  TY T +DGLCKNG + +A+ +F  L+  K E  I  YN +I+G+CK+G++E 
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF +L    + P+VV Y+ MI G C  G  ++A  LF +M+E+  +PN   ++ LIR
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  +     EL+ +M+      DAS + +V ++L
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 237/459 (51%), Gaps = 6/459 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++     + G ++KS   P  + F+ L+  +   ++     +L  +++  G   + +TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+N  CR S   +AL +  +M        +  EPN VT +++++G C    + +A  L+
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMK------LGYEPNIVTLSSLLNGYCHSKRISEAVALV 174

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM     +PN VT+ ++I G       +EA  L   M+ +G QP++VT+ V+++ LCK 
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKR 234

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G  D A  LL+ M Q  + P    Y T++DG C    ++ A  LF  ME+ G +  V +Y
Sbjct: 235 GDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTY 294

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI+  C       A  L S+M+ + I PDV   + L     +  ++  A KL+DEM +
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +     TY + I+G C +  + EA ++F  +    C  D+ +Y++LI G CK+ R++ 
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDE 414

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            +ELFR +    LV N VTY+ +I GL   G  D A+++F +M  + V PN++T++ L+ 
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           G  +  +  K + +   ++   + P     +I+++ + K
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 227/428 (53%), Gaps = 6/428 (1%)

Query: 35  AESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
           +E ++ +A ALF ++      P +  ++ L++ + + +   V ++L E+M N      + 
Sbjct: 58  SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN------LG 111

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
              N  TY+ +I+  C+   +  A  +L +M     +PN+VT +S++ G+C++K  +EA 
Sbjct: 112 MPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  +M   G QPN VTFN ++  L  + K  EA  L+D M+  G +PD  TY  +++G 
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G  + A  L   ME    +  V  Y+ +I+G CKNK ++ AL+L+ EM +KGI+P+V
Sbjct: 232 CKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNV 291

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +++L   L    +   A +L  +M    +  D +T+   ID   K G +VEA +L+  
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     +  I  Y+SLI+G C   RL+ A ++F  +      P+VV+YS +I G C   +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D+  +LF +M +  +V N +T+  LI+G  +  +     E+  +M    V P+    + 
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 455 VVDLLAKN 462
           ++D L KN
Sbjct: 472 LLDGLCKN 479



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 207/404 (51%), Gaps = 10/404 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     F++L ++ +    P  + +T++I GLC    + +A  LF ++   G  P+V TY
Sbjct: 235 GDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTY 294

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++ LC       A  L  +M            P+  T++ +ID   KEG + +A++L
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERK------INPDVFTFSALIDAFVKEGKLVEAEKL 348

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I P++VTY+S+I GFC     +EAK++F  M+ +   P+VV+++ ++   CK
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCK 408

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++DE   L   M Q G+  +  TY TL+ G    G  + A+E+F  M S G    + +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G CKN ++E A+ ++  +    ++P +  +N +  G+ +  +VE  + LF  + 
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  D   Y T I G C+ G   EA  LF  ++      +   YN+LI    + G  E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            + EL + +       +  T   ++  + +DG++DK+   FLDM
Sbjct: 589 ASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS---FLDM 628



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 111/225 (49%)

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ A++L+ EM+     P ++  + L   + ++++ +    L ++MQ  G+  + +TY 
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I+  C+   +  A+ +   +  L  E +I   +SL++G C S R+  A+ L   +   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              PN VT++ +I GL    +  +A  L   M      P+++T+ +++ G  +  +    
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
             LL+KM++  + P   I + ++D L KN+   ++L  F   E +
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETK 285


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  335 bits (860), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 182/488 (37%), Positives = 285/488 (58%), Gaps = 31/488 (6%)

Query: 15   LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
            LK  F PDAVT T+L+KG+  E+ I +A  LF ++   G   D  TY  L+NGLC+   T
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067

Query: 75   IVALNLFEEM-ANGNGE---FGVVCE------------------------PNTVTYTTII 106
             +A+ L E+M  N  G+   +G++ +                        P+ V Y++++
Sbjct: 1068 GLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127

Query: 107  DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
            DGLC+ G + +A E   +M+ + I  +V TY S+I G   A  W E       M+D+G  
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187

Query: 167  PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
            P+  TF +++D LCK GK+ EA ++L+LM   G  PD  TYNTL++G CL G++  A +L
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247

Query: 227  FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
            F S+   G K  VFSY+ILINGYCK+++I+ A   + EM  KG+KP  V +NTL   L +
Sbjct: 1248 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQ 1307

Query: 287  IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              +V  A KLF EMQ  G      TY   +DGLCKNG++ EA++LF +++  + + +I  
Sbjct: 1308 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEV 1367

Query: 347  YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
            ++ L+DG+C++G+LE A + F  +    L P+ + Y+I+I GLCN G + +A  L   ME
Sbjct: 1368 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 1427

Query: 407  ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA---KNE 463
            E   +P+ ITF+++I+  ++ NE  + I+LL +M+  N  PD ++ S+++ L +   +  
Sbjct: 1428 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWH 1487

Query: 464  ISLNSLPS 471
             +L SLP+
Sbjct: 1488 AALVSLPN 1495



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 210/388 (54%), Gaps = 12/388 (3%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G  +    +   ++ +   PD V ++SL+ GLC   R+ EA   F ++   G   DV+TY
Sbjct: 1099 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 1158

Query: 62   TTLVNGLCRT---SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
             +L++GL R          LNL  +             P+  T+T +IDGLCKEG V +A
Sbjct: 1159 NSLIHGLSRAGLWKEVTWFLNLMVDRG---------FSPDAFTFTILIDGLCKEGKVGEA 1209

Query: 119  KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            +++L  M+ K  +P+++TY +++ G C      +A +LF  + D+G++ NV ++N++++ 
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 1269

Query: 179  LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
             CK+ K+DEA R  + M   G++P   TYNTL+   C +GRV  A++LFV M++ G    
Sbjct: 1270 YCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 1329

Query: 239  VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            + +Y +L++G CKN  +E A+ L+  +     KP++ + + L  G+    ++E A+K FD
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389

Query: 299  EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            E+ +NG+  DT  Y   I+GLC  G + EAV+L   +    C  D   +N +I  L K  
Sbjct: 1390 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 1449

Query: 359  RLEIALELFRSLPCGVLVPNVVTYSIMI 386
             +  A++L   +      P+    S+++
Sbjct: 1450 EIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 152/300 (50%), Gaps = 3/300 (1%)

Query: 164  GVQPNVVTFNVIMDELCKNG--KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            G + ++  F   + + C+ G  K+++A +L D  +     P   T+N LL      G  +
Sbjct: 904  GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYS 963

Query: 222  HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
                ++  +  +G +  +++ +ILI+  C  + +     ++   L +G +PD V   TL 
Sbjct: 964  TVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLV 1023

Query: 282  VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             G++  + +  A +LFDEM + G+  D  TY   I+GLCK      A++L   ++   C+
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCK 1082

Query: 342  FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
             D+  Y  +ID LCK G    AL++F  +    ++P+VV YS ++ GLC  G++ +A + 
Sbjct: 1083 GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 1142

Query: 402  FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            F +ME   +  +V T++ LI G  R     +V   L+ M +    PDA   +I++D L K
Sbjct: 1143 FKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCK 1202



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 6/164 (3%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G +     +   I K+   P+   F+ L+ G+C   ++ EA   F ++   G EPD   Y
Sbjct: 1344 GHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAY 1403

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              L+NGLC       A+ L  +M          C P+++T+  II  L KE  + +A +L
Sbjct: 1404 NILINGLCNKGMLSEAVKLLWQMEEKG------CLPDSITFNVIIQNLLKENEIHEAIQL 1457

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
            L +M+++N  P+    + ++    +   W+ A       + +GV
Sbjct: 1458 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 175/488 (35%), Positives = 279/488 (57%), Gaps = 11/488 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRVS    ++ R+++    PD +T  +L+ GLC   +  EA  L  K+  +GC+P+  TY
Sbjct: 270 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 329

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N +C++  T +A+ L  +M   N +       + V Y+ IIDGLCK G +D A  L
Sbjct: 330 GPVLNVMCKSGQTALAMELLRKMEERNIKL------DAVKYSIIIDGLCKHGSLDNAFNL 383

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ K I  N++TY  +I GFC A  W++  +L  +M+ + + PNVVTF+V++D   K
Sbjct: 384 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 443

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA  L   MI  G+ PD  TY +L+DGFC    ++ A ++   M S GC   + +
Sbjct: 444 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 503

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILINGYCK   I+  L L+ +M  +G+  D V +NTL  G  E+ ++  A +LF EM 
Sbjct: 504 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 563

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              V  +  TY+  +DGLC NG   +A+E+F  +   K E DI  YN +I G+C + +++
Sbjct: 564 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 623

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +LF SLP   + P V TY+IMIGGLC  G + +A  LF  MEE+   P+  T+++LI
Sbjct: 624 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 683

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL-----NSLPSFTVHE 476
           R  +   + +K ++L+ ++K      DAS + +V+D+L+ ++ +      N   S +   
Sbjct: 684 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDKANYFSKYHNCSKSTSFWN 743

Query: 477 QQEEVDES 484
           Q E+  +S
Sbjct: 744 QPEKPSDS 751



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 240/436 (55%), Gaps = 6/436 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  + F+ L   +    +     AL  ++ + G   +++T + ++N  CR     +A + 
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             ++     + G   EPNT+T++T+I+GLC EG V +A EL+ +M +   KP+++T  ++
Sbjct: 244 MGKII----KLGY--EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 297

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C +    EA  L  +M++ G QPN VT+  +++ +CK+G+   A  LL  M +  +
Sbjct: 298 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 357

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + DA  Y+ ++DG C  G +++A  LF  ME  G    + +Y+ILI G+C     +    
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +M+ + I P+VV  + L     +  ++  A +L  EM   G+A DT TY + IDG C
Sbjct: 418 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 477

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K  ++ +A ++   +    C+ +IR +N LI+G CK+ R++  LELFR +    +V + V
Sbjct: 478 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 537

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I G C  G+++ A++LF +M    V PN++T+ +L+ G     E  K +E+  K+
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597

Query: 441 KEINVMPDASIVSIVV 456
           ++  +  D  I +I++
Sbjct: 598 EKSKMELDIGIYNIII 613



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 215/428 (50%), Gaps = 7/428 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P V  ++ L + + +T    + L L ++M     E   +   N  T + +I+  C+   +
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQM-----ELKGIAH-NLYTLSIMINCFCRCRKL 237

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A   + ++     +PN +T++++I G C     +EA  L   M++ G +P+++T N +
Sbjct: 238 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 297

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++ LC +GK  EA  L+D M+++G +P+A TY  +L+  C +G+   A EL   ME    
Sbjct: 298 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 357

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           K     YSI+I+G CK+  ++ A +L++EM  KGI  +++ +N L  G     + +   K
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M +  +  +  T+   ID   K G + EA EL   +       D   Y SLIDG C
Sbjct: 418 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 477

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K   L+ A ++   +      PN+ T++I+I G C   ++D   +LF  M    VV + +
Sbjct: 478 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 537

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF-TV 474
           T++ LI+GF  + + +   EL  +M    V P+     I++D L  N  S  +L  F  +
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597

Query: 475 HEQQEEVD 482
            + + E+D
Sbjct: 598 EKSKMELD 605



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 172/343 (50%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
            D A +L   M      P V+ ++ +       K ++    L  +M  +G+  N+ T ++
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++  C+  K+  A   +  +I+ G  P+  T++TL++G CL GRV+ A EL   M  MG
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            K  + + + L+NG C + +   A+ L  +M+  G +P+ V +  +   + +  Q   A 
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +L  +M+   +  D   Y   IDGLCK+G +  A  LF+ + +     +I  YN LI G 
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C +GR +   +L R +    + PNVVT+S++I     +G++ +A +L  +M    + P+ 
Sbjct: 407 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 466

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           IT+  LI GF + N   K  +++  M      P+    +I+++
Sbjct: 467 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 509



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 151/311 (48%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           ++A  LF +M+     P V+ F+ +   + K  + D    L   M   G+  + +T + +
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ FC   ++  A      +  +G +    ++S LING C    +  AL L   M+  G 
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           KPD++  NTL  GL    +   A  L D+M   G   +  TY   ++ +CK+G    A+E
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +     + D   Y+ +IDGLCK G L+ A  LF  +    +  N++TY+I+IGG C
Sbjct: 348 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 407

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
           N G+ D    L  DM +  + PNV+TF +LI  F++  +  +  EL  +M    + PD  
Sbjct: 408 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 467

Query: 451 IVSIVVDLLAK 461
             + ++D   K
Sbjct: 468 TYTSLIDGFCK 478



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 138/278 (49%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K D+A  L   MI     P    ++ L      T + +    L   ME  G  H +++ S
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I+IN +C+ +++  A S   +++  G +P+ +  +TL  GL    +V  A +L D M   
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D  T  T ++GLC +G   EA+ L   +    C+ +   Y  +++ +CKSG+  +A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           +EL R +    +  + V YSI+I GLC  G +D A +LF +ME   +  N+IT+++LI G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F          +LL  M +  + P+    S+++D   K
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 443


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  335 bits (858), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 170/463 (36%), Positives = 269/463 (58%), Gaps = 6/463 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRVS    ++ R+++    PD +T  +L+ GLC   +  EA  L  K+  +GC+P+  TY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N +C++  T +A+ L  +M   N +       + V Y+ IIDGLCK G +D A  L
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKL------DAVKYSIIIDGLCKHGSLDNAFNL 285

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ K I  N++TY  +I GFC A  W++  +L  +M+ + + PNVVTF+V++D   K
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA  L   MI  G+ PD  TY +L+DGFC    ++ A ++   M S GC   + +
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILINGYCK   I+  L L+ +M  +G+  D V +NTL  G  E+ ++  A +LF EM 
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              V  +  TY+  +DGLC NG   +A+E+F  +   K E DI  YN +I G+C + +++
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +LF SLP   + P V TY+IMIGGLC  G + +A  LF  MEE+   P+  T+++LI
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           R  +   + +K ++L+ ++K      DAS + +V+D+L+   +
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628



 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 240/436 (55%), Gaps = 6/436 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  + F+ L   +    +     AL  ++ + G   +++T + ++N  CR     +A + 
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             ++     + G   EPNT+T++T+I+GLC EG V +A EL+ +M +   KP+++T  ++
Sbjct: 146 MGKII----KLGY--EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C +    EA  L  +M++ G QPN VT+  +++ +CK+G+   A  LL  M +  +
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + DA  Y+ ++DG C  G +++A  LF  ME  G    + +Y+ILI G+C     +    
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +M+ + I P+VV  + L     +  ++  A +L  EM   G+A DT TY + IDG C
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K  ++ +A ++   +    C+ +IR +N LI+G CK+ R++  LELFR +    +V + V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I G C  G+++ A++LF +M    V PN++T+ +L+ G     E  K +E+  K+
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499

Query: 441 KEINVMPDASIVSIVV 456
           ++  +  D  I +I++
Sbjct: 500 EKSKMELDIGIYNIII 515



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 230/467 (49%), Gaps = 7/467 (1%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           S F+   +++   ++    + +  +A  LF  +      P V  ++ L + + +T    +
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
            L L ++M     E   +   N  T + +I+  C+   +  A   + ++     +PN +T
Sbjct: 107 VLALCKQM-----ELKGIAH-NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTIT 160

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           ++++I G C     +EA  L   M++ G +P+++T N +++ LC +GK  EA  L+D M+
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           ++G +P+A TY  +L+  C +G+   A EL   ME    K     YSI+I+G CK+  ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A +L++EM  KGI  +++ +N L  G     + +   KL  +M +  +  +  T+   I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D   K G + EA EL   +       D   Y SLIDG CK   L+ A ++   +      
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN+ T++I+I G C   ++D   +LF  M    VV + +T++ LI+GF  + + +   EL
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF-TVHEQQEEVD 482
             +M    V P+     I++D L  N  S  +L  F  + + + E+D
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  334 bits (857), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 168/457 (36%), Positives = 270/457 (59%), Gaps = 6/457 (1%)

Query: 3    RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            R+S    ++ ++  + + P+ VTF +LI GL   ++  EA AL  ++   GC+PD+ TY 
Sbjct: 780  RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 839

Query: 63   TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
             +VNGLC+   T +A NL  +M  G        EP  + Y TIIDGLCK   +D A  L 
Sbjct: 840  VVVNGLCKRGDTDLAFNLLNKMEQGK------LEPGVLIYNTIIDGLCKYKHMDDALNLF 893

Query: 123  LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             +M+ K I+PNVVTY+S+I   C    W++A RL  +M+++ + P+V TF+ ++D   K 
Sbjct: 894  KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 953

Query: 183  GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            GK+ EA +L D M++  + P   TY++L++GFC+  R++ AK++F  M S  C   V +Y
Sbjct: 954  GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 1013

Query: 243  SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
            + LI G+CK K +E  + ++ EM  +G+  + V +N L  GLF+    + A ++F EM  
Sbjct: 1014 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 1073

Query: 303  NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            +GV  +  TY T +DGLCKNG + +A+ +F  L+  K E  I  YN +I+G+CK+G++E 
Sbjct: 1074 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 1133

Query: 363  ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
              +LF +L    + P+VV Y+ MI G C  G  ++A  LF +M+E+  +PN   ++ LIR
Sbjct: 1134 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 1193

Query: 423  GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
              +R  +     EL+ +M+      DAS + +V ++L
Sbjct: 1194 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 1230



 Score =  287 bits (735), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 143/396 (36%), Positives = 233/396 (58%), Gaps = 6/396 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  TF  +I   C   ++  A ++  K+   G EPD  T  +LVNG CR +    A++L 
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           ++M     E G   +P+ V Y  IID LCK   V+ A +   +++ K I+PNVVTYT+++
Sbjct: 282 DKMV----EIGY--KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 335

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +  W++A RL  +M+ + + PNV+T++ ++D   KNGK+ EA  L + M++  + 
Sbjct: 336 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 395

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY++L++G CL  R++ A ++F  M S GC   V SY+ LING+CK K +E  + L
Sbjct: 396 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 455

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EM  +G+  + V +NTL  G F+   V++A + F +M   G++ D WTY   + GLC 
Sbjct: 456 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 515

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           NG + +A+ +F  ++  + + DI  Y ++I G+CK+G++E A  LF SL    L P++VT
Sbjct: 516 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 575

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           Y+ M+ GLC  G + +   L+  M++  ++ N  T 
Sbjct: 576 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 611



 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 248/511 (48%), Gaps = 58/511 (11%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +VS    +LG++LK  + PD VT  SL+ G C  +R+ +A +L  K+   G +PD+  Y 
Sbjct: 238 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 297

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++ LC+T     A + F+E+            PN VTYT +++GLC       A  LL
Sbjct: 298 AIIDSLCKTKRVNDAFDFFKEIERKG------IRPNVVTYTALVNGLCNSSRWSDAARLL 351

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  K I PNV+TY++++  F       EAK LF EM+   + P++VT++ +++ LC +
Sbjct: 352 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 411

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DEA+++ DLM+  G   D  +YNTL++GFC   RV    +LF  M   G      +Y
Sbjct: 412 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 471

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+ +  +++ A   +S+M   GI PD+  +N L  GL +  ++E+A  +F++MQ+
Sbjct: 472 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 531

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D  TY T I G+CK G + EA  LF +L +   + DI  Y +++ GLC  G L  
Sbjct: 532 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 591

Query: 363 ALELFRSLPCGVLVPNVVTYS-------------------------IMIGGLCNDG---- 393
              L+  +    L+ N  T S                          +  G+C       
Sbjct: 592 VEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLL 651

Query: 394 -----------------------QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                                  ++D A  LF +M ++   P++I F  L+    ++N+ 
Sbjct: 652 RAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKF 711

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             VI L  +M+ + +  +    SI+++   +
Sbjct: 712 DVVISLGEQMQNLGIPHNHYTYSILINCFCR 742



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 238/459 (51%), Gaps = 6/459 (1%)

Query: 3    RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            ++     + G ++KS   P  + F+ L+  +   ++     +L  +++  G   + +TY+
Sbjct: 675  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734

Query: 63   TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
             L+N  CR S   +AL +  +M     + G   EPN VT +++++G C    + +A  L+
Sbjct: 735  ILINCFCRRSQLPLALAVLGKMM----KLGY--EPNIVTLSSLLNGYCHSKRISEAVALV 788

Query: 123  LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             QM     +PN VT+ ++I G       +EA  L   M+ +G QP++VT+ V+++ LCK 
Sbjct: 789  DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 848

Query: 183  GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            G  D A  LL+ M Q  + P    YNT++DG C    ++ A  LF  ME+ G +  V +Y
Sbjct: 849  GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 908

Query: 243  SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
            S LI+  C       A  L S+M+ + I PDV   + L     +  ++  A KL+DEM +
Sbjct: 909  SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 968

Query: 303  NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
              +     TY + I+G C +  + EA ++F  +    C  D+  YN+LI G CK  R+E 
Sbjct: 969  RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 1028

Query: 363  ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +E+FR +    LV N VTY+I+I GL   G  D A+++F +M  + V PN++T++ L+ 
Sbjct: 1029 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 1088

Query: 423  GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G  +  +  K + +   ++   + P     +I+++ + K
Sbjct: 1089 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 229/428 (53%), Gaps = 6/428 (1%)

Query: 35   AESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
            +E ++ +A ALF ++      P +  ++ L++ + + +   V ++L E+M N     G+ 
Sbjct: 672  SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI- 726

Query: 95   CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
               N  TY+ +I+  C+   +  A  +L +M     +PN+VT +S++ G+C++K  +EA 
Sbjct: 727  -PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 785

Query: 155  RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
             L  +M   G QPN VTFN ++  L  + K  EA  L+D M+  G +PD  TY  +++G 
Sbjct: 786  ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 845

Query: 215  CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
            C  G  + A  L   ME    +  V  Y+ +I+G CK K ++ AL+L+ EM +KGI+P+V
Sbjct: 846  CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 905

Query: 275  VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
            V +++L   L    +   A +L  +M    +  D +T+   ID   K G +VEA +L+  
Sbjct: 906  VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 965

Query: 335  LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
            +     +  I  Y+SLI+G C   RL+ A ++F  +      P+VVTY+ +I G C   +
Sbjct: 966  MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025

Query: 395  MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
            +++  ++F +M +  +V N +T+++LI+G  +  +     E+  +M    V P+    + 
Sbjct: 1026 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 1085

Query: 455  VVDLLAKN 462
            ++D L KN
Sbjct: 1086 LLDGLCKN 1093



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/582 (25%), Positives = 246/582 (42%), Gaps = 128/582 (21%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +   +++    PD VT++SLI GLC   RI EA  +F  +   GC  DV +Y
Sbjct: 377 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 436

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG C+       + LF EM+    + G+V   NTVTY T+I G  + G VDKA+E 
Sbjct: 437 NTLINGFCKAKRVEDGMKLFREMS----QRGLV--SNTVTYNTLIQGFFQAGDVDKAQEF 490

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM    I P++ TY  ++ G C   +  +A  +F +M  + +  ++VT+  ++  +CK
Sbjct: 491 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 550

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG------- 234
            GK++EA  L   +   G++PD  TY T++ G C  G ++  + L+  M+  G       
Sbjct: 551 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 610

Query: 235 ------------------CKHTVFSYSILINGYCKNK----------------------- 253
                             C +       + +G CK                         
Sbjct: 611 LSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNG 670

Query: 254 ----EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
               +++ A++L+ EM+     P ++  + L   + ++++ +    L ++MQ  G+  + 
Sbjct: 671 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 730

Query: 310 WTYRTFIDGLCK------------------------------NGY-----IVEAVEL--- 331
           +TY   I+  C+                              NGY     I EAV L   
Sbjct: 731 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 790

Query: 332 ------------FHTL------------------RILK--CEFDIRAYNSLIDGLCKSGR 359
                       F+TL                  R++   C+ D+  Y  +++GLCK G 
Sbjct: 791 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 850

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            ++A  L   +  G L P V+ Y+ +I GLC    MD A +LF +ME   + PNV+T+  
Sbjct: 851 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 910

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           LI         S    LL  M E  + PD    S ++D   K
Sbjct: 911 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 205/404 (50%), Gaps = 10/404 (2%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G     F +L ++ +    P  + + ++I GLC    + +A  LF ++   G  P+V TY
Sbjct: 849  GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 908

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++L++ LC       A  L  +M            P+  T++ +ID   KEG + +A++L
Sbjct: 909  SSLISCLCNYGRWSDASRLLSDMIERK------INPDVFTFSALIDAFVKEGKLVEAEKL 962

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +M  ++I P++VTY+S+I GFC     +EAK++F  M+ +   P+VVT+N ++   CK
Sbjct: 963  YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 1022

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              +++E   +   M Q G+  +  TYN L+ G    G  + A+E+F  M S G    + +
Sbjct: 1023 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 1082

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            Y+ L++G CKN ++E A+ ++  +    ++P +  +N +  G+ +  +VE  + LF  + 
Sbjct: 1083 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 1142

Query: 302  RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              GV  D   Y T I G C+ G   EA  LF  ++      +   YN+LI    + G  E
Sbjct: 1143 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 1202

Query: 362  IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
             + EL + +       +  T   ++  + +DG++DK+   FLDM
Sbjct: 1203 ASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS---FLDM 1242



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 194/366 (53%), Gaps = 6/366 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A++LF +M      F     P+ V +  ++  + K    D    L  +M+   I+ ++ T
Sbjct: 172 AIDLFSDMVKSR-PF-----PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 225

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           +  VI  FC     + A  +  +M+  G +P+ VT   +++  C+  ++ +A  L+D M+
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G +PD   YN ++D  C T RVN A + F  +E  G +  V +Y+ L+NG C +    
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L S+M+ K I P+V+ ++ L     +  +V  A +LF+EM R  +  D  TY + I
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLC +  I EA ++F  +    C  D+ +YN+LI+G CK+ R+E  ++LFR +    LV
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            N VTY+ +I G    G +DKA++ F  M+   + P++ T+++L+ G     E  K + +
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525

Query: 437 LHKMKE 442
              M++
Sbjct: 526 FEDMQK 531



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 172/331 (51%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P++V +  ++      K ++    L  +M   G++ ++ TFN++++  C   ++  A  +
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  M++ G  PD  T  +L++GFC   RV+ A  L   M  +G K  + +Y+ +I+  CK
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            K +  A   + E+  KGI+P+VV +  L  GL    +   A +L  +M +  +  +  T
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   +D   KNG ++EA ELF  +  +  + DI  Y+SLI+GLC   R++ A ++F  + 
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
               + +VV+Y+ +I G C   +++    LF +M +  +V N +T++ LI+GF +  +  
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           K  E   +M    + PD    +I++  L  N
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDN 516



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 131/257 (50%), Gaps = 3/257 (1%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+++A  L   M++    P    +N LL       + +    L   ME +G ++ +++++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I+IN +C   ++  ALS+  +ML  G +PD V   +L  G    ++V  A  L D+M   
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D   Y   ID LCK   + +A + F  +       ++  Y +L++GLC S R   A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             L   +    + PNV+TYS ++     +G++ +A++LF +M   ++ P+++T+  LI G
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 424 FI---RINEPSKVIELL 437
                RI+E +++ +L+
Sbjct: 408 LCLHDRIDEANQMFDLM 424



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 123/241 (51%)

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           ++N A +LF  M       ++  ++ L++   K K+ +  +SL  +M   GI+ D+   N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            +        QV  A  +  +M + G   D  T  + ++G C+   + +AV L   +  +
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             + DI AYN++ID LCK+ R+  A + F+ +    + PNVVTY+ ++ GLCN  +   A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             L  DM +  + PNVIT+  L+  F++  +  +  EL  +M  +++ PD    S +++ 
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 459 L 459
           L
Sbjct: 408 L 408


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  334 bits (857), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 169/457 (36%), Positives = 273/457 (59%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD +TFT+LI GL   ++  EA AL  ++   GC+P++ TY 
Sbjct: 95  RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VNGLC+     +A NL  +M           E + V + TIID LCK   VD A  L 
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAK------IEADVVIFNTIIDSLCKYRHVDDALNLF 208

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K I+PNVVTY+S+I   C    W++A +L  +M+++ + PN+VTFN ++D   K 
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA +L D MI+  + PD FTYN+L++GFC+  R++ AK++F  M S  C   + +Y
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+CK+K +E    L+ EM  +G+  D V + TL  GLF     + A K+F +M  
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLC NG + +A+E+F  ++  + + DI  Y ++I+G+CK+G+++ 
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF SL    + PNVVTY+ MI GLC+   + +A  L   M+E+  +P+  T++ LIR
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+    + DAS + +V ++L
Sbjct: 509 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 232/448 (51%), Gaps = 6/448 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++KS   P    F  L+  +    +     +L  K++  G   +++TY  L+N  CR S 
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
             +AL L  +M     + G   EP+ VT +++++G C    +  A  L+ QM +   +P+
Sbjct: 61  ISLALALLGKMM----KLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 114

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            +T+T++I G       +EA  L   M+ +G QPN+VT+ V+++ LCK G +D A  LL+
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M    +  D   +NT++D  C    V+ A  LF  ME+ G +  V +YS LI+  C   
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
               A  L S+M+ K I P++V  N L     +  +   A KL D+M +  +  D +TY 
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I+G C +  + +A ++F  +    C  D+  YN+LI G CKS R+E   ELFR +   
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            LV + VTY+ +I GL +DG  D A+ +F  M  + V P+++T+ +L+ G     +  K 
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
           +E+   M++  +  D  I + +++ + K
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCK 442



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 215/424 (50%), Gaps = 6/424 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P +F +  L++ + +     + ++L E+M       G+    N  TY  +I+  C+   +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQI 61

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A  LL +M     +P++VT +S++ G+C+ K  ++A  L  +M++ G +P+ +TF  +
Sbjct: 62  SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  L  + K  EA  L+D M+Q G +P+  TY  +++G C  G ++ A  L   ME+   
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V  ++ +I+  CK + ++ AL+L+ EM +KGI+P+VV +++L   L    +   A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M    +  +  T+   ID   K G  VEA +L   +     + DI  YNSLI+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
              RL+ A ++F  +      P++ TY+ +I G C   +++   +LF +M    +V + +
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
           T+  LI+G     +     ++  +M    V PD    SI++D L  N     +L  F   
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421

Query: 476 EQQE 479
           ++ E
Sbjct: 422 QKSE 425



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 203/404 (50%), Gaps = 10/404 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L ++  +    D V F ++I  LC    + +A  LF ++   G  P+V TY
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++ LC       A  L  +M            PN VT+  +ID   KEG   +A++L
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKK------INPNLVTFNALIDAFVKEGKFVEAEKL 277

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  ++I P++ TY S+I GFC     ++AK++F  M+ +   P++ T+N ++   CK
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + ++++ + L   M   G+  D  TY TL+ G    G  ++A+++F  M S G    + +
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL++G C N ++E AL ++  M    IK D+ I+ T+  G+ +  +V+  + LF  + 
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  +  TY T I GLC    + EA  L   ++      D   YN+LI    + G   
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 517

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            + EL R +     V +  T   ++  + +DG++DK+   FLDM
Sbjct: 518 ASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS---FLDM 557


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  334 bits (856), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 168/457 (36%), Positives = 270/457 (59%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++  + + P+ VTF +LI GL   ++  EA AL  ++   GC+PD+ TY 
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VNGLC+   T +A NL  +M  G        EP  + Y TIIDGLCK   +D A  L 
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGK------LEPGVLIYNTIIDGLCKYKHMDDALNLF 279

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K I+PNVVTY+S+I   C    W++A RL  +M+++ + P+V TF+ ++D   K 
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L D M++  + P   TY++L++GFC+  R++ AK++F  M S  C   V +Y
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+CK K +E  + ++ EM  +G+  + V +N L  GLF+    + A ++F EM  
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  +  TY T +DGLCKNG + +A+ +F  L+  K E  I  YN +I+G+CK+G++E 
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF +L    + P+VV Y+ MI G C  G  ++A  LF +M+E+  +PN   ++ LIR
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  +     EL+ +M+      DAS + +V ++L
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 237/459 (51%), Gaps = 6/459 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++     + G ++KS   P  + F+ L+  +   ++     +L  +++  G   + +TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+N  CR S   +AL +  +M        +  EPN VT +++++G C    + +A  L+
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMK------LGYEPNIVTLSSLLNGYCHSKRISEAVALV 174

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM     +PN VT+ ++I G       +EA  L   M+ +G QP++VT+ V+++ LCK 
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G  D A  LL+ M Q  + P    YNT++DG C    ++ A  LF  ME+ G +  V +Y
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI+  C       A  L S+M+ + I PDV   + L     +  ++  A KL+DEM +
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +     TY + I+G C +  + EA ++F  +    C  D+  YN+LI G CK  R+E 
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            +E+FR +    LV N VTY+I+I GL   G  D A+++F +M  + V PN++T++ L+ 
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           G  +  +  K + +   ++   + P     +I+++ + K
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 229/428 (53%), Gaps = 6/428 (1%)

Query: 35  AESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
           +E ++ +A ALF ++      P +  ++ L++ + + +   V ++L E+M N     G+ 
Sbjct: 58  SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI- 112

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
              N  TY+ +I+  C+   +  A  +L +M     +PN+VT +S++ G+C++K  +EA 
Sbjct: 113 -PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  +M   G QPN VTFN ++  L  + K  EA  L+D M+  G +PD  TY  +++G 
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G  + A  L   ME    +  V  Y+ +I+G CK K ++ AL+L+ EM +KGI+P+V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +++L   L    +   A +L  +M    +  D +T+   ID   K G +VEA +L+  
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     +  I  Y+SLI+G C   RL+ A ++F  +      P+VVTY+ +I G C   +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +++  ++F +M +  +V N +T+++LI+G  +  +     E+  +M    V P+    + 
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 455 VVDLLAKN 462
           ++D L KN
Sbjct: 472 LLDGLCKN 479



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 205/404 (50%), Gaps = 10/404 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     F +L ++ +    P  + + ++I GLC    + +A  LF ++   G  P+V TY
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++ LC       A  L  +M            P+  T++ +ID   KEG + +A++L
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERK------INPDVFTFSALIDAFVKEGKLVEAEKL 348

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I P++VTY+S+I GFC     +EAK++F  M+ +   P+VVT+N ++   CK
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++E   +   M Q G+  +  TYN L+ G    G  + A+E+F  M S G    + +
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G CKN ++E A+ ++  +    ++P +  +N +  G+ +  +VE  + LF  + 
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  D   Y T I G C+ G   EA  LF  ++      +   YN+LI    + G  E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            + EL + +       +  T   ++  + +DG++DK+   FLDM
Sbjct: 589 ASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS---FLDM 628


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  334 bits (856), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 169/457 (36%), Positives = 273/457 (59%), Gaps = 6/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD +TFT+LI GL   ++  EA AL  ++   GC+P++ TY 
Sbjct: 94  RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 153

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VNGLC+     +A NL  +M           E + V + TIID LCK   VD A  L 
Sbjct: 154 VVVNGLCKRGDIDLAFNLLNKMEAAK------IEADVVIFNTIIDSLCKYRHVDDALNLF 207

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K I+PNVVTY+S+I   C    W++A +L  +M+++ + PN+VTFN ++D   K 
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA +L D MI+  + PD FTYN+L++GFC+  R++ AK++F  M S  C   + +Y
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+CK+K +E    L+ EM  +G+  D V + TL  GLF     + A K+F +M  
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  D  TY   +DGLC NG + +A+E+F  ++  + + DI  Y ++I+G+CK+G+++ 
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             +LF SL    + PNVVTY+ MI GLC+   + +A  L   M+E+  +P+  T++ LIR
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 507

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+    + DAS + +V ++L
Sbjct: 508 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 544



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 222/426 (52%), Gaps = 8/426 (1%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH--TIVALNLFEEMANGNGEFGVVC 95
           ++ +A  LF  +      P +F +  L++ + +      +++L L  +M     + G   
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMM----KLGY-- 75

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           EP+ VT +++++G C    +  A  L+ QM +   +P+ +T+T++I G       +EA  
Sbjct: 76  EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           L   M+ +G QPN+VT+ V+++ LCK G +D A  LL+ M    +  D   +NT++D  C
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
               V+ A  LF  ME+ G +  V +YS LI+  C       A  L S+M+ K I P++V
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             N L     +  +   A KL D+M +  +  D +TY + I+G C +  + +A ++F  +
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               C  D+  YN+LI G CKS R+E   ELFR +    LV + VTY+ +I GL +DG  
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           D A+ +F  M  + V P+++T+ +L+ G     +  K +E+   M++  +  D  I + +
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435

Query: 456 VDLLAK 461
           ++ + K
Sbjct: 436 IEGMCK 441



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 230/484 (47%), Gaps = 43/484 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESR--IMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           + G ++KS   P    F  L+  +    +  ++ + AL  K+   G EP + T ++L+NG
Sbjct: 29  LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNG 88

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
            C       A+ L ++M     E G    P+T+T+TT+I GL       +A  L+ +M  
Sbjct: 89  YCHGKRISDAVALVDQMV----EMGY--RPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           +  +PN+VTY  V+ G C   D + A  L  +M    ++ +VV FN I+D LCK   +D+
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  L   M   G+RP+  TY++L+   C  GR + A +L   M        + +++ LI+
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
            + K  +   A  L+ +M+ + I PD+  +N+L  G     ++++A ++F+ M       
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D  TY T I G CK+  + +  ELF  +       D   Y +LI GL   G  + A ++F
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA----------------------------- 398
           + +    + P+++TYSI++ GLCN+G+++KA                             
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442

Query: 399 ------RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
                  DLF  +    V PNV+T++ +I G        +   LL KMKE   +PD+   
Sbjct: 443 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 502

Query: 453 SIVV 456
           + ++
Sbjct: 503 NTLI 506



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 203/404 (50%), Gaps = 10/404 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L ++  +    D V F ++I  LC    + +A  LF ++   G  P+V TY
Sbjct: 163 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 222

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++ LC       A  L  +M            PN VT+  +ID   KEG   +A++L
Sbjct: 223 SSLISCLCSYGRWSDASQLLSDMIEKK------INPNLVTFNALIDAFVKEGKFVEAEKL 276

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  ++I P++ TY S+I GFC     ++AK++F  M+ +   P++ T+N ++   CK
Sbjct: 277 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 336

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + ++++ + L   M   G+  D  TY TL+ G    G  ++A+++F  M S G    + +
Sbjct: 337 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 396

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL++G C N ++E AL ++  M    IK D+ I+ T+  G+ +  +V+  + LF  + 
Sbjct: 397 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 456

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  +  TY T I GLC    + EA  L   ++      D   YN+LI    + G   
Sbjct: 457 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 516

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            + EL R +     V +  T   ++  + +DG++DK+   FLDM
Sbjct: 517 ASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS---FLDM 556



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 187/359 (52%)

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M     +P++VT +S++ G+C+ K  ++A  L  +M++ G +P+ +TF  ++  L 
Sbjct: 66  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 125

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            + K  EA  L+D M+Q G +P+  TY  +++G C  G ++ A  L   ME+   +  V 
Sbjct: 126 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 185

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            ++ +I+  CK + ++ AL+L+ EM +KGI+P+VV +++L   L    +   A +L  +M
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 245

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +  +  T+   ID   K G  VEA +L   +     + DI  YNSLI+G C   RL
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ++F  +      P++ TY+ +I G C   +++   +LF +M    +V + +T+  L
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           I+G     +     ++  +M    V PD    SI++D L  N     +L  F   ++ E
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  333 bits (855), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 170/440 (38%), Positives = 261/440 (59%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    F VL +ILK  + P+ +T T+LIKGLC + +I +A     K+   G   +  +
Sbjct: 120 LGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVS 179

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  AL L   +       G + +PN V Y TIID +CK   V++A +
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAFD 233

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+VVTY ++I GFC      +A  LF +M+ + + PNV TFN+++D  C
Sbjct: 234 LYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFC 293

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++ EA  +L +M++ G++PD FTYN+L+D +CL   VN AK +F ++   G    + 
Sbjct: 294 KERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIH 353

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYSI+I+G+CK K+++ A++L+ EM    I PDVV +N+L  GL ++ ++  A KL DEM
Sbjct: 354 SYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 413

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  D  TY + +D LCKN  + +A+ L   ++    + DI  Y +L+DGLCK+GRL
Sbjct: 414 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRL 473

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A  +F  L     + +V  Y+ MI G C+ G  D++ DL   MEEN  +PN +T++++
Sbjct: 474 EDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEII 533

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I      +E  K  +LL +M
Sbjct: 534 ICSLFDKDENDKAEKLLREM 553



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 162/305 (53%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  +++     P+  TF  L+ G C E R+ EA  +   +   G +PDVFT
Sbjct: 260 VGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFT 319

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++  C       A ++F  ++    + GV   PN  +Y+ +I G CK   VD+A  
Sbjct: 320 YNSLMDRYCLVKEVNKAKHIFNTIS----QRGV--NPNIHSYSIMIHGFCKIKKVDEAMN 373

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M   NI P+VVTY S+I G C     + A +L  EM D+GV  + +T+N I+D LC
Sbjct: 374 LFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALC 433

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN ++D+A  LL  M   G++PD  TY TL+DG C  GR+  A+ +F  +   G    V 
Sbjct: 434 KNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVN 493

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ +I G+C +   + +L L S+M   G  P+ V +  +   LF+  + ++A KL  EM
Sbjct: 494 IYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553

Query: 301 QRNGV 305
              G+
Sbjct: 554 ITRGL 558



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 185/388 (47%), Gaps = 38/388 (9%)

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K   V     LL Q   KN KP++  +  ++     +  ++    L  +M   G+  ++V
Sbjct: 52  KHNLVSSFNRLLHQ---KNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLV 108

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
             +++++   + G+   +  +L  +++ G  P+  T  TL+ G CL G+++ A +    +
Sbjct: 109 ILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKV 168

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            ++G      SY  LING CK  +   AL L   +  K ++P+VV++NT+   + ++  V
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 228

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             AF L+ EM   G++ D  TY   I G C  G + +A +LF+ +       ++  +N L
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNIL 288

Query: 351 IDGLCKSGRLE-----------------------------------IALELFRSLPCGVL 375
           +DG CK  RL+                                    A  +F ++    +
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN+ +YSIMI G C   ++D+A +LF +M  N ++P+V+T++ LI G  ++ + S  ++
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNE 463
           L+ +M +  V  D    + ++D L KN 
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNH 436


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  332 bits (851), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 177/443 (39%), Positives = 266/443 (60%), Gaps = 12/443 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+++ GF VL +ILK  + P  +TFT+LIKGLC + ++ +A     KL   G + D  +
Sbjct: 107 MGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVS 166

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG+C+   T  A+ L  ++       G + +PN   Y TIID LCK   V +A  
Sbjct: 167 YGTLINGVCKIGDTRGAIKLVRKID------GRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I  +VVTYT++I GFC A    EA  L  EM+ + + PNV T+N+++D LC
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +L +M++  V+PD  TY+TL+DG+ L   +  A+ +F +M  MG    V 
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILING+CKNK ++ AL+L+ EM  K + P +V +++L  GL +  ++   + L DEM
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR---ILKCEFDIRAYNSLIDGLCKS 357
           +  G+ A+  TY + IDGLCKNG++  A+ LF+ ++   I  C F    +  L+DGLCK 
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSF---TFTILLDGLCKG 457

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GRL+ A E F+ L       +V  Y++MI G C  G +++A  +   MEEN  VPN +TF
Sbjct: 458 GRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTF 517

Query: 418 DMLIRGFIRINEPSKVIELLHKM 440
           D++I    + +E  K  +LL +M
Sbjct: 518 DIIINALFKKDENDKAEKLLRQM 540



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 229/443 (51%), Gaps = 6/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T   LI   C   +I    ++  K+   G +P   T+TTL+ GLC       AL+ 
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHF 151

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +++     +F      + V+Y T+I+G+CK G    A +L+ ++  +  KPNV  Y ++
Sbjct: 152 HDKLLAQGIKF------DQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTI 205

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  +  +EA  LF EM  +G+  +VVT+  ++   C   K+ EA  LL+ M+   +
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTI 265

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+ +TYN L+D  C  G+V  AK +   M     K  V +YS L++GY    E++ A  
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQH 325

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +++ M   G+ PDV  +  L  G  +   V+ A  LF EM +  +     TY + IDGLC
Sbjct: 326 VFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC 385

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+G I    +L   +R      ++  YNSLIDGLCK+G L+ A+ LF  +    + P   
Sbjct: 386 KSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSF 445

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++I++ GLC  G++  A++ F D+       +V  ++++I G  +     + + +L KM
Sbjct: 446 TFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKM 505

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
           +E   +P+A    I+++ L K +
Sbjct: 506 EENGCVPNAVTFDIIINALFKKD 528



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 215/414 (51%), Gaps = 6/414 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L    TP  + F  ++           A +L  +L + G +PD+ T   L+N  C   
Sbjct: 49  RMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
                 ++  ++           +P+T+T+TT+I GLC +G V+KA     ++  + IK 
Sbjct: 109 QITFGFSVLAKILKRG------YQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKF 162

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           + V+Y ++I G C   D   A +L  ++  +  +PNV  +N I+D LCK   + EA  L 
Sbjct: 163 DQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLF 222

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M   G+  D  TY TL+ GFC+  ++  A  L   M        V++Y+IL++  CK 
Sbjct: 223 SEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +++ A ++ + ML   +KPDV+ ++TL  G F ++++++A  +F+ M   GV  D  +Y
Sbjct: 283 GKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSY 342

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+G CKN  + EA+ LF  +        I  Y+SLIDGLCKSGR+    +L   +  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRD 402

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
             +  NV+TY+ +I GLC +G +D+A  LF  M++  + P   TF +L+ G  +
Sbjct: 403 RGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCK 456



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 216/421 (51%), Gaps = 6/421 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A + F ++      P +  +  +++   +  H   A++L   +     E   + +P+ +
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRL-----ELKGI-QPDLI 95

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T   +I+  C  G +     +L ++  +  +P+ +T+T++I+G C     N+A     ++
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 155

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + QG++ + V++  +++ +CK G    A +L+  +     +P+   YNT++D  C    V
Sbjct: 156 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 215

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A  LF  M + G    V +Y+ LI G+C   +++ A+ L +EM+ K I P+V  +N L
Sbjct: 216 SEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +  +V+ A  +   M +  V  D  TY T +DG      + +A  +F+ + ++  
Sbjct: 276 VDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGV 335

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+ +Y  LI+G CK+  ++ AL LF+ +    +VP +VTYS +I GLC  G++    D
Sbjct: 336 TPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWD 395

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L  +M +  +  NVIT++ LI G  +     + I L +KMK+  + P +   +I++D L 
Sbjct: 396 LIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLC 455

Query: 461 K 461
           K
Sbjct: 456 K 456



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 174/331 (52%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P ++ +  ++  F   K ++ A  L   +  +G+QP+++T N++++  C  G++     +
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  +++ G +P   T+ TL+ G CL G+VN A      + + G K    SY  LING CK
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
             +  GA+ L  ++  +  KP+V ++NT+   L +   V  A+ LF EM   G++AD  T
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I G C    + EA+ L + + +     ++  YN L+D LCK G+++ A  +   + 
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+V+TYS ++ G     ++ KA+ +F  M    V P+V ++ +LI GF +     
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + + L  +M + N++P     S ++D L K+
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 162/334 (48%)

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           ++ ++A   F  M+     P ++ FN I+D   K      A  L   +   G++PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L++ FC  G++     +   +   G +    +++ LI G C   ++  AL  + ++L+
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +GIK D V + TL  G+ +I     A KL  ++       +   Y T ID LCK   + E
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  LF  +       D+  Y +LI G C + +L+ A+ L   +    + PNV TY+I++ 
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC +G++ +A+++   M +  V P+VIT+  L+ G+  + E  K   + + M  + V P
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337

Query: 448 DASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
           D    +I+++   KN++   +L  F    Q+  V
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQKNMV 371


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  332 bits (851), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 169/440 (38%), Positives = 266/440 (60%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F VLG+ILK  + P+ +T  +L+KGLC +  + ++     K+   G + D  +
Sbjct: 58  LGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVS 117

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  AL L   + + +        PN V Y TIIDGLCK+  V++A +
Sbjct: 118 YATLLNGLCKIGETRSALKLLRMIEDRS------TRPNVVMYNTIIDGLCKDKLVNEAYD 171

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I PNV+TY+++I GFC A    EA  L  EM+ + + PNV T+ ++MD LC
Sbjct: 172 LYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALC 231

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  LL +M + GV+P+  +YNTL+DG+CL G V +AK++F +M   G    V+
Sbjct: 232 KEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVY 291

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+I+  CK+K ++ A++L  E+L K + P+ V +++L  G  ++ ++  A  L  EM
Sbjct: 292 SYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEM 351

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G  AD  TY + +D LCKN  + +A  LF  ++    + +   Y +LIDGLCK GR 
Sbjct: 352 YHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRH 411

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A +LF+ L       NV TY++MI GLC +G +D+A  +   MEEN  +P+ +TF+++
Sbjct: 412 KNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEII 471

Query: 421 IRGFIRINEPSKVIELLHKM 440
           IR     ++  K  +LLH+M
Sbjct: 472 IRSLFEKDQNDKAEKLLHEM 491



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 205/406 (50%), Gaps = 6/406 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P +  +  +V  L +  H   A++LF++M           EP+  T   +I+  C  G +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKG------IEPDLFTLNILINCFCHLGQM 61

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             +  +L ++     +PN +T  ++++G C   +  ++     +++ QG Q + V++  +
Sbjct: 62  TFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATL 121

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++ LCK G+   A +LL ++     RP+   YNT++DG C    VN A +L+  M++ G 
Sbjct: 122 LNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +YS LI G+C   ++  A  L +EM+ K I P+V  +  L   L +  +V+ A  
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L   M + GV  +  +Y T +DG C  G +  A ++FHT+       ++ +YN +ID LC
Sbjct: 242 LLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLC 301

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS R++ A+ L R +    +VPN VTYS +I G C  G++  A DL  +M       +V+
Sbjct: 302 KSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVV 361

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           T+  L+    +     K   L  KMKE  + P+    + ++D L K
Sbjct: 362 TYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCK 407



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 192/367 (52%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P  + +  I+  L K      A  L  QM+ K I+P++ T   +I  FC+      +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QPN +T N +M  LC  G++ ++    D ++  G + D  +Y TLL+G C 
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G    A +L   +E    +  V  Y+ +I+G CK+K +  A  LYSEM ++GI P+V+ 
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           ++TL  G     Q+  AF L +EM    +  + +TY   +D LCK G + EA  L   + 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + ++ +YN+L+DG C  G ++ A ++F ++    + PNV +Y+IMI  LC   ++D
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A +L  ++    +VPN +T+  LI GF ++   +  ++LL +M       D    + ++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 457 DLLAKNE 463
           D L KN+
Sbjct: 368 DALCKNQ 374



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 159/304 (52%), Gaps = 11/304 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  + K    P+ V++ +L+ G C    +  A  +F  +   G  P+V++Y
Sbjct: 234 GKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSY 293

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++ LC++     A+NL  E+ + N        PNTVTY+++IDG CK G +  A +L
Sbjct: 294 NIMIDRLCKSKRVDEAMNLLREVLHKN------MVPNTVTYSSLIDGFCKLGRITSALDL 347

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  +    +VVTYTS++   C  ++ ++A  LF++M ++G+QPN  T+  ++D LCK
Sbjct: 348 LKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCK 407

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+   A +L   ++  G R + +TYN ++ G C  G ++ A  +   ME  GC     +
Sbjct: 408 GGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVT 467

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           + I+I    +  + + A  L  EM++K +     +    F G    ++ ++A KL  EM 
Sbjct: 468 FEIIIRSLFEKDQNDKAEKLLHEMIAKDL-----LRFRDFHGERSPNENDKAEKLLHEMI 522

Query: 302 RNGV 305
             G+
Sbjct: 523 AKGL 526


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  332 bits (850), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 170/440 (38%), Positives = 262/440 (59%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F VLG+ILK  + PD +T  +L+KGLC +  + ++     K+   G + D  +
Sbjct: 58  LGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVS 117

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  A+ L   + + +        PN V Y TIIDGLCK+  V++A +
Sbjct: 118 YGTLLNGLCKIGETRCAVKLLRMIEDRS------TRPNVVMYNTIIDGLCKDKLVNEAYD 171

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P+ +TYT++I GFC       A  L  EM+ + + P V  +N++++ LC
Sbjct: 172 LYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALC 231

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + EA  LL +M + G++P   TY+TL+DG+CL G V +AK++F +M  MG    V+
Sbjct: 232 KEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVY 291

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+ING CK K ++ A++L  EML K + PD V +N+L  GL +  ++  A  L +EM
Sbjct: 292 SYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM 351

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G  AD  TY + +D LCKN  + +A  LF  ++    +  +  Y +LIDGLCK GRL
Sbjct: 352 HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRL 411

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ELF+ L       +V TY++MI GLC +G  D+A  +   ME+N  +PN +TF+++
Sbjct: 412 KNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 471

Query: 421 IRGFIRINEPSKVIELLHKM 440
           IR     +E  K  +LLH+M
Sbjct: 472 IRSLFEKDENDKAEKLLHEM 491



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 202/406 (49%), Gaps = 6/406 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P +  +  ++  L +    + A++L ++M             N VT   +I+  C  G +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKG------IRANFVTLNILINCFCHLGQM 61

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             +  +L ++     +P+ +T  ++++G C   +  ++     +++ QG Q + V++  +
Sbjct: 62  AFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTL 121

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++ LCK G+   A +LL ++     RP+   YNT++DG C    VN A +L+  M++ G 
Sbjct: 122 LNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                +Y+ LI G+C   ++ GA SL  EM+ K I P V I+N L   L +   V+ A  
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKN 241

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L   M + G+     TY T +DG C  G +  A ++FH +  +    ++ +YN +I+GLC
Sbjct: 242 LLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLC 301

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K  R++ A+ L R +    +VP+ VTY+ +I GLC  G++  A +L  +M       +V+
Sbjct: 302 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 361

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           T+  L+    +     K   L  KMKE  + P     + ++D L K
Sbjct: 362 TYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK 407



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   F +L  ++     P    +  LI  LC E  + EA  L   +   G +P V T
Sbjct: 198 LGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVT 257

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TL++G C       A  +F  M     + GV   PN  +Y  +I+GLCK   VD+A  
Sbjct: 258 YSTLMDGYCLVGEVQNAKQIFHAMV----QMGV--NPNVYSYNIMINGLCKCKRVDEAMN 311

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  KN+ P+ VTY S+I G C +     A  L  EM  +G   +VVT+  ++D LC
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 371

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN  +D+A+ L   M + G++P  +TY  L+DG C  GR+ +A+ELF  +   GC   V+
Sbjct: 372 KNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVW 431

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I+G CK    + AL++ S+M   G  P+ V    +   LFE  + ++A KL  EM
Sbjct: 432 TYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491

Query: 301 QRNGV 305
              G+
Sbjct: 492 IAKGL 496



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 168/331 (50%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P ++ +  ++      K +  A  L  +M  +G++ N VT N++++  C  G+M  +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  +++ G +PD  T NTL+ G CL G V  +      + + G +    SY  L+NG CK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
             E   A+ L   +  +  +P+VV++NT+  GL +   V  A+ L+ EM   G+  D  T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I G C  G ++ A  L   + +      +  YN LI+ LCK G ++ A  L   + 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P VVTYS ++ G C  G++  A+ +F  M +  V PNV +++++I G  +     
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + + LL +M   N++PD    + ++D L K+
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 338


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  332 bits (850), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 169/463 (36%), Positives = 276/463 (59%), Gaps = 6/463 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRVS    ++ R+++    PD VT ++LI GLC + R+ EA  L  ++  +G +PD  TY
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 242

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N LC++ ++ +AL+LF +M   N       + + V Y+ +ID LCK+G  D A  L
Sbjct: 243 GPVLNRLCKSGNSALALDLFRKMEERN------IKASVVQYSIVIDSLCKDGSFDDALSL 296

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ K IK +VVTY+S+I G C    W++  ++  EM+ + + P+VVTF+ ++D   K
Sbjct: 297 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 356

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA  L + MI  G+ PD  TYN+L+DGFC    ++ A ++F  M S GC+  + +
Sbjct: 357 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 416

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILIN YCK K ++  + L+ E+ SKG+ P+ + +NTL +G  +  ++  A +LF EM 
Sbjct: 417 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 476

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV     TY   +DGLC NG + +A+E+F  ++  +    I  YN +I G+C + +++
Sbjct: 477 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 536

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF SL    + P+VVTY++MIGGLC  G + +A  LF  M+E+   P+  T+++LI
Sbjct: 537 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           R  +  +     +EL+ +MK      D+S + +V+D+L+   +
Sbjct: 597 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRL 639



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 241/455 (52%), Gaps = 8/455 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFTY 61
           +V+    +   +++S   P  + F  L   + A ++  +    F K + + G E D++T 
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAV-ARTKQYDLVLGFCKGMELNGIEHDMYTM 137

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++N  CR    + A ++          + +  EP+T+T++T+++G C EG V +A  L
Sbjct: 138 TIMINCYCRKKKLLFAFSVLGR------AWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 191

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M +   +P++VT +++I G C     +EA  L   M++ G QP+ VT+  +++ LCK
Sbjct: 192 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 251

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    A  L   M +  ++     Y+ ++D  C  G  + A  LF  ME  G K  V +
Sbjct: 252 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 311

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI G C + + +    +  EM+ + I PDVV  + L     +  ++  A +L++EM 
Sbjct: 312 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 371

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+A DT TY + IDG CK   + EA ++F  +    CE DI  Y+ LI+  CK+ R++
Sbjct: 372 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 431

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             + LFR +    L+PN +TY+ ++ G C  G+++ A++LF +M    V P+V+T+ +L+
Sbjct: 432 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 491

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            G     E +K +E+  KM++  +     I +I++
Sbjct: 492 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 526



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 223/447 (49%), Gaps = 8/447 (1%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           S  T   +++   ++    + ++ +A  LF  +      P    +  L + + RT    +
Sbjct: 58  SSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDL 117

Query: 77  ALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            L   + M  NG        E +  T T +I+  C++  +  A  +L +      +P+ +
Sbjct: 118 VLGFCKGMELNG-------IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTI 170

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T+++++ GFC     +EA  L   M++   +P++VT + +++ LC  G++ EA  L+D M
Sbjct: 171 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +++G +PD  TY  +L+  C +G    A +LF  ME    K +V  YSI+I+  CK+   
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 290

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + ALSL++EM  KGIK DVV +++L  GL    + +   K+  EM    +  D  T+   
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           ID   K G ++EA EL++ +       D   YNSLIDG CK   L  A ++F  +     
Sbjct: 351 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 410

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P++VTYSI+I   C   ++D    LF ++    ++PN IT++ L+ GF +  + +   E
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKN 462
           L  +M    V P      I++D L  N
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDN 497



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 100/225 (44%)

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           ++  A+ L+  M+     P  +  N L   +    Q +        M+ NG+  D +T  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I+  C+   ++ A  +      L  E D   +++L++G C  GR+  A+ L   +   
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P++VT S +I GLC  G++ +A  L   M E    P+ +T+  ++    +    +  
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           ++L  KM+E N+       SIV+D L K+    ++L  F   E +
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  331 bits (849), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 179/491 (36%), Positives = 275/491 (56%), Gaps = 29/491 (5%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++S  F  +G+I+K  + PD VTF++LI GLC E R+ EA  L  ++   G +P + T  
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGE---------FGVVCEP---------------- 97
            LVNGLC       A+ L + M     +           V+C+                 
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241

Query: 98  ----NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
               + V Y+ IIDGLCK+G +D A  L  +M+ K  K +++ YT++IRGFCYA  W++ 
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            +L  +M+ + + P+VV F+ ++D   K GK+ EA  L   MIQ G+ PD  TY +L+DG
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           FC   +++ A  +   M S GC   + +++ILINGYCK   I+  L L+ +M  +G+  D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V +NTL  G  E+ ++E A +LF EM    V  D  +Y+  +DGLC NG   +A+E+F 
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +   K E DI  YN +I G+C + +++ A +LF SLP   + P+V TY+IMIGGLC  G
Sbjct: 482 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            + +A  LF  MEE+   PN  T+++LIR  +   + +K  +L+ ++K      DAS V 
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601

Query: 454 IVVDLLAKNEI 464
           +VVD+L+   +
Sbjct: 602 MVVDMLSDGRL 612



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 233/436 (53%), Gaps = 6/436 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  + F+ L   +    +      L  ++ + G   +++T + ++N  CR     +A + 
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             ++     + G   EP+TVT++T+I+GLC EG V +A EL+ +M +   KP ++T  ++
Sbjct: 130 MGKII----KLGY--EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNAL 183

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C     ++A  L   M++ G QPN VT+  ++  +CK+G+   A  LL  M +  +
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI 243

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + DA  Y+ ++DG C  G +++A  LF  ME  G K  +  Y+ LI G+C     +    
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +M+ + I PDVV  + L     +  ++  A +L  EM + G++ DT TY + IDG C
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + +A  +   +    C  +IR +N LI+G CK+  ++  LELFR +    +V + V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I G C  G+++ A++LF +M    V P+++++ +L+ G     EP K +E+  K+
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483

Query: 441 KEINVMPDASIVSIVV 456
           ++  +  D  I +I++
Sbjct: 484 EKSKMELDIGIYNIII 499



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 180/357 (50%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A +L  +M     +P ++ ++ +       K ++    L  +M  +G+  N+ T +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++  C+  K+  A   +  +I+ G  PD  T++TL++G CL GRV+ A EL   M  MG 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           K T+ + + L+NG C N ++  A+ L   M+  G +P+ V +  +   + +  Q   A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M+   +  D   Y   IDGLCK+G +  A  LF+ + I   + DI  Y +LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
            +GR +   +L R +    + P+VV +S +I     +G++ +A +L  +M +  + P+ +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           T+  LI GF + N+  K   +L  M      P+    +I+++   K  +  + L  F
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 148/327 (45%)

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           V+Y   +R        ++A  LF EM     +P ++ F+ +   + +  + D    L   
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   G+  + +T + +++  C   +++ A      +  +G +    ++S LING C    
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  AL L   M+  G KP ++  N L  GL    +V  A  L D M   G   +  TY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +  +CK+G    A+EL   +   K + D   Y+ +IDGLCK G L+ A  LF  +    
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
              +++ Y+ +I G C  G+ D    L  DM +  + P+V+ F  LI  F++  +  +  
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
           EL  +M +  + PD    + ++D   K
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCK 364


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  331 bits (848), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 169/463 (36%), Positives = 276/463 (59%), Gaps = 6/463 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRVS    ++ R+++    PD VT ++LI GLC + R+ EA  L  ++  +G +PD  TY
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N LC++ ++ +AL+LF +M   N       + + V Y+ +ID LCK+G  D A  L
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERN------IKASVVQYSIVIDSLCKDGSFDDALSL 267

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ K IK +VVTY+S+I G C    W++  ++  EM+ + + P+VVTF+ ++D   K
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA  L + MI  G+ PD  TYN+L+DGFC    ++ A ++F  M S GC+  + +
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILIN YCK K ++  + L+ E+ SKG+ P+ + +NTL +G  +  ++  A +LF EM 
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV     TY   +DGLC NG + +A+E+F  ++  +    I  YN +I G+C + +++
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF SL    + P+VVTY++MIGGLC  G + +A  LF  M+E+   P+  T+++LI
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           R  +  +     +EL+ +MK      D+S + +V+D+L+   +
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRL 610



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 241/455 (52%), Gaps = 8/455 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFTY 61
           +V+    +   +++S   P  + F  L   + A ++  +    F K + + G E D++T 
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAV-ARTKQYDLVLGFCKGMELNGIEHDMYTM 108

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++N  CR    + A ++          + +  EP+T+T++T+++G C EG V +A  L
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGR------AWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M +   +P++VT +++I G C     +EA  L   M++ G QP+ VT+  +++ LCK
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    A  L   M +  ++     Y+ ++D  C  G  + A  LF  ME  G K  V +
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI G C + + +    +  EM+ + I PDVV  + L     +  ++  A +L++EM 
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+A DT TY + IDG CK   + EA ++F  +    CE DI  Y+ LI+  CK+ R++
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             + LFR +    L+PN +TY+ ++ G C  G+++ A++LF +M    V P+V+T+ +L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            G     E +K +E+  KM++  +     I +I++
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 223/447 (49%), Gaps = 8/447 (1%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           S  T   +++   ++    + ++ +A  LF  +      P    +  L + + RT    +
Sbjct: 29  SSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDL 88

Query: 77  ALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            L   + M  NG        E +  T T +I+  C++  +  A  +L +      +P+ +
Sbjct: 89  VLGFCKGMELNG-------IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTI 141

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T+++++ GFC     +EA  L   M++   +P++VT + +++ LC  G++ EA  L+D M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +++G +PD  TY  +L+  C +G    A +LF  ME    K +V  YSI+I+  CK+   
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + ALSL++EM  KGIK DVV +++L  GL    + +   K+  EM    +  D  T+   
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           ID   K G ++EA EL++ +       D   YNSLIDG CK   L  A ++F  +     
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P++VTYSI+I   C   ++D    LF ++    ++PN IT++ L+ GF +  + +   E
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKN 462
           L  +M    V P      I++D L  N
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDN 468



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 100/225 (44%)

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           ++  A+ L+  M+     P  +  N L   +    Q +        M+ NG+  D +T  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I+  C+   ++ A  +      L  E D   +++L++G C  GR+  A+ L   +   
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P++VT S +I GLC  G++ +A  L   M E    P+ +T+  ++    +    +  
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           ++L  KM+E N+       SIV+D L K+    ++L  F   E +
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  330 bits (847), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 168/447 (37%), Positives = 266/447 (59%), Gaps = 6/447 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F VLG+ILK  + P+ +   +L+KGLC +  + ++     K+   G + D  +
Sbjct: 58  LGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVS 117

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+NGLC+   T  A+ L   + + +        P+ V Y+TIIDGLCK+  VD+A +
Sbjct: 118 YGILLNGLCKIGETRCAIKLLRTIEDRS------TRPDVVMYSTIIDGLCKDKLVDEAYD 171

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P+V+TYT++I GFC A    EA  L  EM+ + + PN+ T+N ++D LC
Sbjct: 172 LYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLC 231

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ E+  LL +M + GV+PD   Y+ L+DG+CL G V  AK++F+ M   G    V+
Sbjct: 232 KEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVY 291

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+ING CK K ++ A++L  EML K + PD V +++L  GL ++ ++     L  EM
Sbjct: 292 SYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEM 351

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G  A+  TY + +DGLCKN  + +A+ LF  ++    + +   Y +LIDGLCK GRL
Sbjct: 352 HHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRL 411

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +    LF+ L       +V TY++MI GLC +G  D+A  +   ME+N  +PN +TF+++
Sbjct: 412 KKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEII 471

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMP 447
           IR  +  +E  K  +LLH+M    ++P
Sbjct: 472 IRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 207/406 (50%), Gaps = 6/406 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P +  +  ++  L +  H    ++L ++M       G+V  P+ VT + +I+  C  G +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAK----GIV--PDLVTLSILINCFCHLGQM 61

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             +  +L ++     +PN +   ++++G C   +  ++     +++ QG Q + V++ ++
Sbjct: 62  AFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGIL 121

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++ LCK G+   A +LL  +     RPD   Y+T++DG C    V+ A +L+  M + G 
Sbjct: 122 LNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGI 181

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +Y+ LI G+C   ++  A  L +EM+ K I P++  +NTL   L +  +V+ +  
Sbjct: 182 FPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKN 241

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L   M + GV  D   Y   +DG C  G + +A ++F  +       D+ +YN +I+GLC
Sbjct: 242 LLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLC 301

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K  R++ A+ L R +    ++P+ VTYS +I GLC  G++    DL  +M       N++
Sbjct: 302 KGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLV 361

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           T++ L+ G  +     K I L  KMKE  + P+    + ++D L K
Sbjct: 362 TYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 407



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 59/122 (48%)

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D+   + LI+  C  G++  +  +   +      PN +  + ++ GLC  G++ K+    
Sbjct: 44  DLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFH 103

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             +       + +++ +L+ G  +I E    I+LL  +++ +  PD  + S ++D L K+
Sbjct: 104 DKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKD 163

Query: 463 EI 464
           ++
Sbjct: 164 KL 165


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  330 bits (845), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 173/460 (37%), Positives = 265/460 (57%), Gaps = 20/460 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS    +  +I +    PD +TFT+L+ GLC E R++EA AL  ++   G +PD  TY 
Sbjct: 166 RVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYG 221

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T V+G+C+   T+ ALNL  +M     E   + +PN V Y+ IIDGLCK+G    +  L 
Sbjct: 222 TFVDGMCKMGDTVSALNLLRKME----EISHI-KPNVVIYSAIIDGLCKDGRHSDSHNLF 276

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           ++M+DK I PN+VTY  +I GFC +  W+ A+RL  EM+++ + PNVVT+N +++   K 
Sbjct: 277 IEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKE 336

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA+ L D M+  G+ P+  TYN+++DGFC   R++ A+++F  M + GC   VF++
Sbjct: 337 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GYC  K I+  + L  EM  +G+  + V +NTL  G   +  +  A  L  +M  
Sbjct: 397 TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 456

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYNSLI 351
           +GV  D  T  T +DGLC NG + +A+E+F  ++  K            E D+  YN LI
Sbjct: 457 SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILI 516

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GL   G+   A EL+  +P   +VP+ +TYS MI GLC   ++D+A  +F+ M   +  
Sbjct: 517 CGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS 576

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           PNV+TF+ LI G+ +       +EL  +M    ++ DA I
Sbjct: 577 PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII 616



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 181/386 (46%), Gaps = 52/386 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +L+   +P+ VT+ +LI     E +  EAA L+ ++   G  P+  TY
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C+      A ++F  MA         C P+  T+TT+IDG C    +D   EL
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRIDDGMEL 415

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  + +  N VTY ++I GFC   D N A  L  +M+  GV P++VT N ++D LC 
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 475

Query: 182 NGKMD----------------------------------------------EASRLLDLM 195
           NGK+                                               EA  L + M
Sbjct: 476 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 535

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ PD  TY++++DG C   R++ A ++FVSM S      V +++ LINGYCK   +
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 595

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +  L L+ EM  +GI  D +I+ TL  G  ++  +  A  +F EM  +GV  DT T R  
Sbjct: 596 DDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 655

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCE 341
           + G      +  AV +   L+  + E
Sbjct: 656 LTGFWSKEELERAVAMLEDLQRYQLE 681



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 220/447 (49%), Gaps = 12/447 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF+ +      P V  +  L+  + R     + ++L+++M        + C+    
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ----IRCD--IY 117

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++T +I   C    +  A     ++    + P+VVT+T+++ G C     +EA  LF   
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF--- 174

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
             Q  +P+V+TF  +M+ LC+ G++ EA  LLD M+++G++PD  TY T +DG C  G  
Sbjct: 175 -HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233

Query: 221 NHAKELFVSMESMG-CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
             A  L   ME +   K  V  YS +I+G CK+     + +L+ EM  KGI P++V +N 
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  G     +   A +L  EM    ++ +  TY   I+   K G   EA EL+  +    
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              +   YNS+IDG CK  RL+ A ++F  +      P+V T++ +I G C   ++D   
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 413

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +L  +M    +V N +T++ LI GF  + + +  ++L  +M    V PD    + ++D L
Sbjct: 414 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473

Query: 460 AKNEISLNSLPSFTVHEQQE-EVDESN 485
             N    ++L  F   ++ + ++D S+
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASH 500



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 162/317 (51%), Gaps = 5/317 (1%)

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           K   +A  LF +M+     P+V+ FN +M  + +  + D    L   M +  +R D +++
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             L+  FC   ++  A   F  +  +G    V +++ L++G C +  +  AL L+ ++  
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI-- 177

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
              +PDV+   TL  GL    +V  A  L D M  NG+  D  TY TF+DG+CK G  V 
Sbjct: 178 --CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 328 AVELFHTLR-ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           A+ L   +  I   + ++  Y+++IDGLCK GR   +  LF  +    + PN+VTY+ MI
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
           GG C  G+   A+ L  +M E  + PNV+T++ LI  F++  +  +  EL  +M    ++
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 355

Query: 447 PDASIVSIVVDLLAKNE 463
           P+    + ++D   K +
Sbjct: 356 PNTITYNSMIDGFCKQD 372



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 113/219 (51%), Gaps = 5/219 (2%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G  + K +E A+ L+S+ML     P V+  N L   +  + + +    L+ +M+R  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D +++   I   C    +  A+  F  L  L    D+  + +L+ GLC   R+  AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +LF      +  P+V+T++ ++ GLC +G++ +A  L   M EN + P+ IT+   + G 
Sbjct: 172 DLFHQ----ICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAKN 462
            ++ +    + LL KM+EI ++ P+  I S ++D L K+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKD 266


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  330 bits (845), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 173/460 (37%), Positives = 265/460 (57%), Gaps = 20/460 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS    +  +I +    PD +TFT+L+ GLC E R++EA AL  ++   G +PD  TY 
Sbjct: 166 RVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYG 221

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T V+G+C+   T+ ALNL  +M     E   + +PN V Y+ IIDGLCK+G    +  L 
Sbjct: 222 TFVDGMCKMGDTVSALNLLRKME----EISHI-KPNVVIYSAIIDGLCKDGRHSDSHNLF 276

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           ++M+DK I PN+VTY  +I GFC +  W+ A+RL  EM+++ + PNVVT+N +++   K 
Sbjct: 277 IEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKE 336

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA+ L D M+  G+ P+  TYN+++DGFC   R++ A+++F  M + GC   VF++
Sbjct: 337 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GYC  K I+  + L  EM  +G+  + V +NTL  G   +  +  A  L  +M  
Sbjct: 397 TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 456

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYNSLI 351
           +GV  D  T  T +DGLC NG + +A+E+F  ++  K            E D+  YN LI
Sbjct: 457 SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILI 516

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GL   G+   A EL+  +P   +VP+ +TYS MI GLC   ++D+A  +F+ M   +  
Sbjct: 517 CGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS 576

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           PNV+TF+ LI G+ +       +EL  +M    ++ DA I
Sbjct: 577 PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII 616



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 180/382 (47%), Gaps = 52/382 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +L+   +P+ VT+ +LI     E +  EAA L+ ++   G  P+  TY
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C+      A ++F  MA         C P+  T+TT+IDG C    +D   EL
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRIDDGMEL 415

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  + +  N VTY ++I GFC   D N A  L  +M+  GV P++VT N ++D LC 
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 475

Query: 182 NGKMD----------------------------------------------EASRLLDLM 195
           NGK+                                               EA  L + M
Sbjct: 476 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 535

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ PD  TY++++DG C   R++ A ++FVSM S      V +++ LINGYCK   +
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 595

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +  L L+ EM  +GI  D +I+ TL  G  ++  +  A  +F EM  +GV  DT T R  
Sbjct: 596 DDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 655

Query: 316 IDGLCKNGYIVEAVELFHTLRI 337
           + G      +  AV +   L++
Sbjct: 656 LTGFWSKEELERAVAMLEDLQM 677



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 220/447 (49%), Gaps = 12/447 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF+ +      P V  +  L+  + R     + ++L+++M        + C+    
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ----IRCD--IY 117

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++T +I   C    +  A     ++    + P+VVT+T+++ G C     +EA  LF   
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF--- 174

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
             Q  +P+V+TF  +M+ LC+ G++ EA  LLD M+++G++PD  TY T +DG C  G  
Sbjct: 175 -HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233

Query: 221 NHAKELFVSMESMG-CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
             A  L   ME +   K  V  YS +I+G CK+     + +L+ EM  KGI P++V +N 
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  G     +   A +L  EM    ++ +  TY   I+   K G   EA EL+  +    
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              +   YNS+IDG CK  RL+ A ++F  +      P+V T++ +I G C   ++D   
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 413

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +L  +M    +V N +T++ LI GF  + + +  ++L  +M    V PD    + ++D L
Sbjct: 414 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473

Query: 460 AKNEISLNSLPSFTVHEQQE-EVDESN 485
             N    ++L  F   ++ + ++D S+
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASH 500



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 162/317 (51%), Gaps = 5/317 (1%)

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           K   +A  LF +M+     P+V+ FN +M  + +  + D    L   M +  +R D +++
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             L+  FC   ++  A   F  +  +G    V +++ L++G C +  +  AL L+ ++  
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI-- 177

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
              +PDV+   TL  GL    +V  A  L D M  NG+  D  TY TF+DG+CK G  V 
Sbjct: 178 --CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 328 AVELFHTLR-ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           A+ L   +  I   + ++  Y+++IDGLCK GR   +  LF  +    + PN+VTY+ MI
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
           GG C  G+   A+ L  +M E  + PNV+T++ LI  F++  +  +  EL  +M    ++
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 355

Query: 447 PDASIVSIVVDLLAKNE 463
           P+    + ++D   K +
Sbjct: 356 PNTITYNSMIDGFCKQD 372



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 113/219 (51%), Gaps = 5/219 (2%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G  + K +E A+ L+S+ML     P V+  N L   +  + + +    L+ +M+R  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D +++   I   C    +  A+  F  L  L    D+  + +L+ GLC   R+  AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +LF      +  P+V+T++ ++ GLC +G++ +A  L   M EN + P+ IT+   + G 
Sbjct: 172 DLFHQ----ICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAKN 462
            ++ +    + LL KM+EI ++ P+  I S ++D L K+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKD 266


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  328 bits (841), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 172/457 (37%), Positives = 271/457 (59%), Gaps = 9/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD  TFT+LI GL   ++  EA AL  ++   GC+PD+ TY 
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+VNGLC+     +ALNL  +M           + N V + TIID LCK   V+ A +L 
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAAR------IKANVVIFNTIIDSLCKYRHVEVAVDLF 281

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K I+PNVVTY S+I   C    W++A RL   M+++ + PNVVTFN ++D   K 
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L + MIQ  + PD  TYN L++GFC+  R++ AK++F  M S  C   + +Y
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LING+CK K +E  + L+ EM  +G+  + V + T+  G F+    + A  +F +M  
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           N V  D  TY   + GLC  G +  A+ +F  L+  + E +I  YN++I+G+CK+G++  
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A +LF SL    + P+VVTY+ MI GLC+   + +A DLF  M+E+  +PN  T++ LIR
Sbjct: 522 AWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +R  + +   EL+ +M+    + DAS +S+V ++L
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615



 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 219/422 (51%), Gaps = 6/422 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V     + G ++KS   P  V F  L+  +   ++     +L  +++  G   D++TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
             +N  CR S   +AL +  +M     + G   EP+ VT +++++G C    +  A  L+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMM----KLGY--EPDIVTLSSLLNGYCHSKRISDAVALV 176

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM +   KP+  T+T++I G       +EA  L  +M+ +G QP++VT+  +++ LCK 
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +D A  LL+ M    ++ +   +NT++D  C    V  A +LF  ME+ G +  V +Y
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LIN  C       A  L S ML K I P+VV  N L    F+  ++  A KL +EM +
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  DT TY   I+G C +  + EA ++F  +    C  +I+ YN+LI+G CK  R+E 
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            +ELFR +    LV N VTY+ +I G    G  D A+ +F  M  N V  +++T+ +L+ 
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476

Query: 423 GF 424
           G 
Sbjct: 477 GL 478



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 200/404 (49%), Gaps = 13/404 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L ++  +    + V F ++I  LC    +  A  LFT++   G  P+V TY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+N LC       A  L   M            PN VT+  +ID   KEG + +A++L
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKK------INPNVVTFNALIDAFFKEGKLVEAEKL 350

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I P+ +TY  +I GFC     +EAK++F  M+ +   PN+ T+N +++  CK
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++++   L   M Q G+  +  TY T++ GF   G  + A+ +F  M S      + +
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL++G C   +++ AL ++  +    ++ ++ I+NT+  G+ +  +V  A+ LF  + 
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL- 529

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +  D  TY T I GLC    + EA +LF  ++      +   YN+LI    +     
Sbjct: 530 --SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRA 587

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            + EL + +     V +  T S ++  + +DG++DK+   FL+M
Sbjct: 588 ASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKS---FLNM 627


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  328 bits (841), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 173/440 (39%), Positives = 255/440 (57%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F V  +ILK  + PDAVTFT LIKGLC +  + +A     K+   G + D  +
Sbjct: 106 LGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVS 165

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLCR   T  A+ L   +       G +  PN V Y+TIID +CK+  V+ A +
Sbjct: 166 YGTLINGLCRVGETKAAVQLLRRVD------GKLVRPNVVMYSTIIDSMCKDKLVNDAFD 219

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+VVTY+S+I GFC       A  LF  M+   + PNV TF++++D  C
Sbjct: 220 LYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFC 279

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +L +M++  V+ D  TYN+L+DG+CL  +VN AK LF  M   G    V+
Sbjct: 280 KEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVW 339

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYSI+ING+CK K ++ A+ L+ EM  K I P+VV +N+L  GL +  +   A +L DEM
Sbjct: 340 SYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEM 399

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G  ++  TY + +D +CKN ++ +A+ L   ++    + DI  Y  LI+GLCK GRL
Sbjct: 400 HDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRL 459

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ++F  L      PN+ TY+ +I G CN G  D+   +   M++N  +PN IT+++L
Sbjct: 460 DDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEIL 519

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I      +E  K  +LL +M
Sbjct: 520 IHSLFEKDENDKAEKLLREM 539



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 239/444 (53%), Gaps = 7/444 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T   L+        I  + ++F K+   G  PD  T+T L+ GLC       AL  
Sbjct: 91  PDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYF 150

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +++     +       + V+Y T+I+GLC+ G    A +LL ++  K ++PNVV Y+++
Sbjct: 151 HDKVVAQGFQL------DQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTI 204

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  K  N+A  L+ EM+ + + P+VVT++ ++   C  GK+  A  L + MI   +
Sbjct: 205 IDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNI 264

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+ +T++ L+DGFC  G+V  AK +   M     K  V +Y+ L++GYC  K++  A S
Sbjct: 265 NPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKS 324

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L++ M  +G+ PDV  ++ +  G  +I  V+ A KLF+EM    +  +  TY + +DGLC
Sbjct: 325 LFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLC 384

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+G    A+EL   +       +I  YNS++D +CK+  ++ A+ L   +    + P++ 
Sbjct: 385 KSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIF 444

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+++I GLC  G++D A+ +F D+      PN+ T+  LI GF       + + +L KM
Sbjct: 445 TYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKM 504

Query: 441 KEINVMPDASIVSIVV-DLLAKNE 463
           K+   +P+A    I++  L  K+E
Sbjct: 505 KDNGCIPNAITYEILIHSLFEKDE 528



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 168/305 (55%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++ +   +  R++     P+  TF+ LI G C E ++ EA  +   +     + DV T
Sbjct: 246 VGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVT 305

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G C       A +LF  MA    + GV   P+  +Y+ +I+G CK   VD+A +
Sbjct: 306 YNSLMDGYCLVKQVNKAKSLFNVMA----QRGVT--PDVWSYSIMINGFCKIKMVDEAMK 359

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I PNVVTY S++ G C +   + A  L  EM D+G   N++T+N I+D +C
Sbjct: 360 LFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAIC 419

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN  +D+A  LL  + + G++PD FTY  L++G C  GR++ A+++F  +   G    ++
Sbjct: 420 KNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIY 479

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LING+C     +  L++ S+M   G  P+ + +  L   LFE  + ++A KL  EM
Sbjct: 480 TYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539

Query: 301 QRNGV 305
              G+
Sbjct: 540 IARGL 544



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 190/400 (47%), Gaps = 35/400 (8%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P  + +  I+  L K      A  L  QM+   IKP+ +T   ++  F        +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F +++ +G  P+ VTF +++  LC  G++ +A    D ++  G + D  +Y TL++G C 
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G    A +L   ++    +  V  YS +I+  CK+K +  A  LY EM+SK I PDVV 
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +++L  G   + +++ A  LF+ M  + +  + +T+   IDG CK G + EA  +   + 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 337 ILKCEFDIRAYNSLIDG-----------------------------------LCKSGRLE 361
               + D+  YNSL+DG                                    CK   ++
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++LF  + C  + PNVVTY+ ++ GLC  G+   A +L  +M +     N+IT++ ++
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               + N   K I LL K+KE  + PD    +++++ L K
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCK 455


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  328 bits (840), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 169/440 (38%), Positives = 259/440 (58%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M  ++  F ++ +ILK  + PD +TF +LIKGLC   ++ EA      +   G   D F+
Sbjct: 116 MAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFS 175

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  AL +  ++       G + + N V Y TIID LCK   V  A E
Sbjct: 176 YGTLINGLCKIGETRTALQMLRKID------GKLVKINVVMYNTIIDSLCKHKLVIDAYE 229

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  QM  K I P+VVT++++I GFC      EA  LF EM+ + + P+  TFN+++D LC
Sbjct: 230 LYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALC 289

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +  A  +L +M++ GV P+  TY++L+DG+CL  +VN AK +  ++  MG      
Sbjct: 290 KEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAH 349

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY  +ING+CK K ++ ALSL+++M  KGI PD V +N+L  GL +  ++  A++L DEM
Sbjct: 350 SYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEM 409

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG  A+ +TY   ID LCKN ++ +A+ L   ++    + D+  +N LI GLCK GRL
Sbjct: 410 HDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRL 469

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ++F+ L       N  TY+IM+ GLC +G  D+A  L   M++N ++P+ +T++ L
Sbjct: 470 KNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETL 529

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I+     +E  K  +LL +M
Sbjct: 530 IQALFHKDENEKAEKLLREM 549



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 228/453 (50%), Gaps = 8/453 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAES--RIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
              +L++  T   + F  ++  L   +      A +L  +L   G  PD+FT+  L+N  
Sbjct: 54  FNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCY 113

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C  +    A ++  ++        +  EP+T+T+ T+I GLC  G V +A      +   
Sbjct: 114 CHMAEMNFAFSMMAKI------LKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLAL 167

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
               +  +Y ++I G C   +   A ++  ++  + V+ NVV +N I+D LCK+  + +A
Sbjct: 168 GFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDA 227

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L   MI   + PD  T++ L+ GFC+ G++  A  LF  M         ++++IL++ 
Sbjct: 228 YELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDA 287

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK   ++GA ++   M+ +G+ P+VV +++L  G   ++QV +A  + + + + G A +
Sbjct: 288 LCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPN 347

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             +Y T I+G CK   + EA+ LF+ ++      D   YNSLIDGLCKSGR+  A EL  
Sbjct: 348 AHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVD 407

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +       N+ TY+ +I  LC +  +D+A  L   +++  + P++ TF++LI G  ++ 
Sbjct: 408 EMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVG 467

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                 ++   +       +A   +I+V+ L K
Sbjct: 468 RLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCK 500



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 169/334 (50%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I P++ T+  +I  +C+  + N A  +  +++  G +P+ +TFN ++  LC NGK+ EA 
Sbjct: 99  ITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEAL 158

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
              D ++  G   D F+Y TL++G C  G    A ++   ++    K  V  Y+ +I+  
Sbjct: 159 HFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSL 218

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK+K +  A  LYS+M++K I PDVV  + L  G   + Q+E AF LF EM    +  D 
Sbjct: 219 CKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDY 278

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +T+   +D LCK G +  A  +   +       ++  Y+SL+DG C   ++  A  +  +
Sbjct: 279 YTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNT 338

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +      PN  +Y  MI G C    +D+A  LF DM+   + P+ +T++ LI G  +   
Sbjct: 339 ISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR 398

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            S   EL+ +M +     +    + ++D L KN 
Sbjct: 399 ISYAWELVDEMHDNGQPANIFTYNCLIDALCKNH 432



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 157/300 (52%)

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
            G+ P++ TFN++++  C   +M+ A  ++  +++ G  PD  T+NTL+ G CL G+V  
Sbjct: 97  HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKE 156

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
           A      + ++G     FSY  LING CK  E   AL +  ++  K +K +VV++NT+  
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIID 216

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
            L +   V  A++L+ +M    ++ D  T+   I G C  G + EA  LF  + +     
Sbjct: 217 SLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINP 276

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D   +N L+D LCK G L+ A  +   +    ++PNVVTYS ++ G C   Q++KA+ + 
Sbjct: 277 DYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVL 336

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             + +    PN  ++  +I GF +I    + + L + M+   + PD    + ++D L K+
Sbjct: 337 NTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKS 396


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  327 bits (838), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 172/440 (39%), Positives = 264/440 (60%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+++ GF VL +ILK  + PD VT  +LIKGLC + ++ +A     KL   G + +  +
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 166

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG+C+   T  A+ L  ++       G + +PN   Y+TIID LCK   V +A  
Sbjct: 167 YATLINGVCKIGDTRGAIKLLRKID------GRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I  +VVTY+++I GFC      EA  L  EM+ + + PNV T+N+++D LC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +L +M++  V+PD  TY+TL+DG+ L   V  A+ +F +M  MG    V 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILING+CKNK ++ AL+L+ EM  K + P +V +++L  GL +  ++   + L DEM
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G  AD  TY + IDGLCKNG++  A+ LF+ ++  +   +I  +  L+DGLCK GRL
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A E+F+ L       NV TY++MI G C  G +++A  +   ME+N  +PN  TF+ +
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I    + +E  K  +LL +M
Sbjct: 521 IIALFKKDENDKAEKLLRQM 540



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/445 (32%), Positives = 237/445 (53%), Gaps = 9/445 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T   LI   C   +I    ++  K+   G  PD  T  TL+ GLC       AL+ 
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            +++ A G        + N V+Y T+I+G+CK G    A +LL ++  +  KPNV  Y++
Sbjct: 152 HDKLLAQG-------FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYST 204

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C  +  +EA  LF EM  +G+  +VVT++ ++   C  GK+ EA  LL+ M+   
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+ +TYN L+D  C  G+V  AK +   M     K  V +YS L++GY    E++ A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +++ M   G+ PDV  +  L  G  +   V+ A  LF EM +  +     TY + IDGL
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK+G I    +L   +R      D+  Y+SLIDGLCK+G L+ A+ LF  +    + PN+
Sbjct: 385 CKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNI 444

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            T++I++ GLC  G++  A+++F D+       NV T++++I G  +     + + +L K
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSK 504

Query: 440 MKEINVMPDA-SIVSIVVDLLAKNE 463
           M++   +P+A +  +I++ L  K+E
Sbjct: 505 MEDNGCIPNAFTFETIIIALFKKDE 529



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 166/304 (54%), Gaps = 6/304 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  ++     P+  T+  L+  LC E ++ EA ++   +     +PDV TY
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL++G         A ++F  M+      GV   P+  TYT +I+G CK   VD+A  L
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKNKMVDEALNL 361

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  KN+ P +VTY+S+I G C +        L  EM D+G   +V+T++ ++D LCK
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCK 421

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG +D A  L + M    +RP+ FT+  LLDG C  GR+  A+E+F  + + G    V++
Sbjct: 422 NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+++ING+CK   +E AL++ S+M   G  P+     T+ + LF+  + ++A KL  +M 
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMI 541

Query: 302 RNGV 305
             G+
Sbjct: 542 ARGL 545



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 207/421 (49%), Gaps = 6/421 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A + F ++      P +  +  +++   +  H   A++L   +     E   + +P+ +
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL-----ELKGI-QPDLI 95

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T   +I+  C  G +     +L ++  +   P+ VT  ++I+G C      +A     ++
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + QG Q N V++  +++ +CK G    A +LL  +     +P+   Y+T++D  C    V
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 215

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A  LF  M   G    V +YS LI G+C   +++ A+ L +EM+ K I P+V  +N L
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +  +V+ A  +   M +  V  D  TY T +DG      + +A  +F+ + ++  
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  Y  LI+G CK+  ++ AL LF+ +    +VP +VTYS +I GLC  G++    D
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L  +M +     +VIT+  LI G  +     + I L +KMK+  + P+    +I++D L 
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLC 455

Query: 461 K 461
           K
Sbjct: 456 K 456



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 175/331 (52%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P ++ +  ++  F   K ++ A  L   +  +G+QP+++T N++++  C  G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  +++ G  PD  T NTL+ G CL G+V  A      + + G +    SY+ LING CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
             +  GA+ L  ++  +  KP+V +++T+   L +   V  A+ LF EM   G++AD  T
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I G C  G + EA+ L + + +     ++  YN L+D LCK G+++ A  +   + 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+V+TYS ++ G     ++ KA+ +F  M    V P+V T+ +LI GF +     
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + + L  +M + N++P     S ++D L K+
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 161/334 (48%)

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           ++ ++A   F  M+     P ++ FN I+D   K      A  L   +   G++PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L++ FC  G++     +   +   G      + + LI G C   +++ AL  + ++L+
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G + + V + TL  G+ +I     A KL  ++       +   Y T ID LCK   + E
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  LF  + +     D+  Y++LI G C  G+L+ A+ L   +    + PNV TY+I++ 
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC +G++ +A+ +   M +  V P+VIT+  L+ G+  + E  K   + + M  + V P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 448 DASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
           D    +I+++   KN++   +L  F    Q+  V
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  327 bits (838), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 169/440 (38%), Positives = 258/440 (58%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G ++  F +  +ILK  + P  +TF +LI G+C   ++ EA      +   G   D  +
Sbjct: 107 LGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVS 166

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  AL + +++       G +   + V Y  II+ LCK+  V  A +
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIE------GKLVNTDVVMYNIIINSLCKDKAVSDAYQ 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+VVT+ S+I GFC      EA  LF EM+ + + P+V TF++++D LC
Sbjct: 221 LYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G +  A  +L +M++ GV PD  TY++L+DG+CL   VN AK +F +M  +G      
Sbjct: 281 KDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAH 340

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+ING  K K ++ ALSL+ EM  KGI PD V +N+L  GL ++ ++  A++L DEM
Sbjct: 341 SYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM 400

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG+ AD  TY + ID LCKN +I +A+ L   ++    +  +  YN LIDGLCK GRL
Sbjct: 401 HNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRL 460

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ++F+ L       N  TY+IMI GLC +G  ++A  L   ME N ++P+ +T++ +
Sbjct: 461 KNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETI 520

Query: 421 IRGFIRINEPSKVIELLHKM 440
           IR   R +E  K  +LL +M
Sbjct: 521 IRALFRKDENEKAEKLLREM 540



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/445 (32%), Positives = 234/445 (52%), Gaps = 7/445 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP  VTF  L+   C    +  A ++F K+   G  P   T+ TL+NG+C       AL+
Sbjct: 91  TPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALH 150

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
             + +        +    + V+Y T+I+GLCK G    A ++L +++ K +  +VV Y  
Sbjct: 151 FHDHV------IALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNI 204

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C  K  ++A +L+ EM+ + + P+VVTFN ++   C  G++ EA  L   M+   
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD +T++ L+D  C  G +  AK +   M   G    V +YS L++GYC   E+  A 
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAK 324

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++S M   G+ P    +N +  GL +I  V+ A  LF EM   G+A DT TY + IDGL
Sbjct: 325 HVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGL 384

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I  A +L   +       DI  YNSLID LCK+  ++ A+ L + +    + P++
Sbjct: 385 CKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSM 444

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+I+I GLC  G++  A+D+F D+       N  T++++I G  +    ++   LL K
Sbjct: 445 YTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSK 504

Query: 440 MKEINVMPDA-SIVSIVVDLLAKNE 463
           M+   ++PDA +  +I+  L  K+E
Sbjct: 505 MENNGIIPDAVTYETIIRALFRKDE 529



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 196/399 (49%), Gaps = 13/399 (3%)

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           VN    + H ++ +     +   N   G + + N   YTT I              L  Q
Sbjct: 38  VNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAI-------------SLSHQ 84

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           ++ K I P +VT+  ++  +C+  +   A  +F +++  G  P  +TFN +++ +C NGK
Sbjct: 85  LELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGK 144

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           + EA    D +I  G   D  +Y TL++G C  G    A ++   +E       V  Y+I
Sbjct: 145 LKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNI 204

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +IN  CK+K +  A  LYSEM++K I PDVV  N+L +G   + Q++ AF LF EM    
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D +T+   +D LCK+G I  A  +   +       D+  Y+SL+DG C    +  A 
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAK 324

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            +F ++    + P+  +Y+IMI GL     +D+A  LF +M    + P+ +T++ LI G 
Sbjct: 325 HVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGL 384

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            ++   S   +L+ +M    +  D    + ++D+L KN 
Sbjct: 385 CKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNH 423



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   F +   ++     PD  TF+ L+  LC +  I  A  +   +   G  PDV T
Sbjct: 247 VGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVT 306

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y++L++G C  +    A ++F  M+      GV   P+  +Y  +I+GL K   VD+A  
Sbjct: 307 YSSLMDGYCLVNEVNKAKHVFSTMS----RLGVA--PHAHSYNIMINGLGKIKMVDEALS 360

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+ VTY S+I G C     + A +L  EM + G+  +++T+N ++D LC
Sbjct: 361 LFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLC 420

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN  +D+A  L+  +   G++P  +TYN L+DG C  GR+ +A+++F  +   G     +
Sbjct: 421 KNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAW 480

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+I+ING CK      A  L S+M + GI PD V + T+   LF   + E+A KL  EM
Sbjct: 481 TYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540

Query: 301 QRNGV 305
              G+
Sbjct: 541 IIRGL 545



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 160/315 (50%), Gaps = 2/315 (0%)

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK--NGKMDEASRLLDLMIQHGVRPDAFT 206
           D N     F  M+     P++V FN I+  + K  N     A  L   +   G+ P   T
Sbjct: 37  DVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVT 96

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           +N L++ +C  G +  A  +F  +  +G   T  +++ LING C N +++ AL  +  ++
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           + G   D V + TL  GL +I +   A ++  +++   V  D   Y   I+ LCK+  + 
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A +L+  +   +   D+  +NSLI G C  G+L+ A  LF  +    + P+V T+SI++
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             LC DG + +A+++   M +  V+P+V+T+  L+ G+  +NE +K   +   M  + V 
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVA 336

Query: 447 PDASIVSIVVDLLAK 461
           P A   +I+++ L K
Sbjct: 337 PHAHSYNIMINGLGK 351


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  326 bits (836), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 170/440 (38%), Positives = 262/440 (59%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+++ GF VL +ILK  + PD VT  +LIKGLC + ++ +A     KL   G + +  +
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 166

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG+C+   T  A+    ++       G + +P+ V Y TIID +CK   V +A  
Sbjct: 167 YATLINGVCKIGDTRAAIKFLRKID------GRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I  +VVTY ++I GFC      EA  L  EM+ + + PNV T+N+++D LC
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +L +M++  V+PD  TY+TL+DG+ L   V  A+ +F +M  MG    V 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILING+CKNK ++ AL+L+ EM  K + P +V +++L  GL +  ++   + L DEM
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G  AD  TY + IDGLCKNG++  A+ LF+ ++  +   +I  +  L+DGLCK GRL
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A E+F+ L       NV TY++MI G C  G +++A  +   ME+N  +PN  TF+ +
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I    + +E  K  +LL +M
Sbjct: 521 IIALFKKDENDKAEKLLRQM 540



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 144/445 (32%), Positives = 236/445 (53%), Gaps = 9/445 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T   LI   C   +I    ++  K+   G  PD  T  TL+ GLC       AL+ 
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            +++ A G        + N V+Y T+I+G+CK G    A + L ++  +  KP+VV Y +
Sbjct: 152 HDKLLAQG-------FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNT 204

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C  +  +EA  LF EM  +G+  +VVT+N ++   C  GK+ EA  LL+ M+   
Sbjct: 205 IIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKT 264

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+ +TYN L+D  C  G+V  AK +   M     K  V +YS L++GY    E++ A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +++ M   G+ PDV  +  L  G  +   V+ A  LF EM +  +     TY + IDGL
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK+G I    +L   +R      D+  Y+SLIDGLCK+G L+ A+ LF  +    + PN+
Sbjct: 385 CKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNI 444

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            T++I++ GLC  G++  A+++F D+       NV T++++I G  +     + + +L K
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSK 504

Query: 440 MKEINVMPDA-SIVSIVVDLLAKNE 463
           M++   +P+A +  +I++ L  K+E
Sbjct: 505 MEDNGCIPNAFTFETIIIALFKKDE 529



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 168/305 (55%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +L  ++     P+  T+  L+  LC E ++ EA ++   +     +PDV T
Sbjct: 247 VGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TL++G         A ++F  M+      GV   P+  TYT +I+G CK   VD+A  
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKNKMVDEALN 360

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  KN+ P +VTY+S+I G C +   +    L  EM D+G   +V+T++ ++D LC
Sbjct: 361 LFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLC 420

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG +D A  L + M    +RP+ FT+  LLDG C  GR+  A+E+F  + + G    V+
Sbjct: 421 KNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++ING+CK   +E AL++ S+M   G  P+     T+ + LF+  + ++A KL  +M
Sbjct: 481 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540

Query: 301 QRNGV 305
              G+
Sbjct: 541 IARGL 545



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 206/421 (48%), Gaps = 6/421 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A + F ++      P +  +  +++   +  H   A++L   +     E   + +P+ +
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL-----ELKGI-QPDLI 95

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T   +I+  C  G +     +L ++  +   P+ VT  ++I+G C      +A     ++
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + QG Q N V++  +++ +CK G    A + L  +     +PD   YNT++D  C    V
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLV 215

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A  LF  M   G    V +Y+ LI G+C   +++ A+ L +EM+ K I P+V  +N L
Sbjct: 216 SEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +  +V+ A  +   M +  V  D  TY T +DG      + +A  +F+ + ++  
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  Y  LI+G CK+  ++ AL LF+ +    +VP +VTYS +I GLC  G++    D
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWD 395

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L  +M +     +VIT+  LI G  +     + I L +KMK+  + P+    +I++D L 
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLC 455

Query: 461 K 461
           K
Sbjct: 456 K 456



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 191/383 (49%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P  + +  I+D   K      A  L  +++ K I+P+++T   +I  FC+         +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++ +G  P+ VT N ++  LC  G++ +A    D ++  G + +  +Y TL++G C 
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G    A +    ++    K  V  Y+ +I+  CK + +  A  L+SEM  KGI  DVV 
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +NTL  G   + +++ A  L +EM    +  + +TY   +D LCK G + EA  +   + 
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + D+  Y++L+DG      ++ A  +F ++    + P+V TY+I+I G C +  +D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A +LF +M +  +VP ++T+  LI G  +    S V +L+ +M++     D    S ++
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 457 DLLAKNEISLNSLPSFTVHEQQE 479
           D L KN     ++  F   + QE
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQE 439



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 160/334 (47%)

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           ++ ++A   F  M+     P ++ FN I+D   K      A  L   +   G++PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L++ FC  G++     +   +   G      + + LI G C   +++ AL  + ++L+
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G + + V + TL  G+ +I     A K   ++       D   Y T ID +CK   + E
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  LF  + +     D+  YN+LI G C  G+L+ A+ L   +    + PNV TY+I++ 
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC +G++ +A+ +   M +  V P+VIT+  L+ G+  + E  K   + + M  + V P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 448 DASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
           D    +I+++   KN++   +L  F    Q+  V
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 171/460 (37%), Positives = 257/460 (55%), Gaps = 6/460 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V+ GF VLG + K    P  +T T+LI GLC +  + +A  L   +       DV+TY  
Sbjct: 128 VAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGV 187

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+NGLC+T  T+ A+    +M   N +      PN V Y+TI+DGLCK+G V +A  L  
Sbjct: 188 LINGLCKTGDTLAAVEWLRKMEERNWK------PNVVVYSTIMDGLCKDGLVSEALNLCS 241

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M  K ++PN+VTY  +I+G C    W E   L  EM+  G++ ++ T N+++D  CK G
Sbjct: 242 EMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEG 301

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ +A  ++  MI  G  PD FTYN+L+  +CL  ++N A  +F  M S GC   +  ++
Sbjct: 302 KVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFT 361

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G+CK+K I   + L  EM   G  PDVV   TL  G  +  +   A +LF  M + 
Sbjct: 362 SLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKY 421

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  T    +DGLCK   + EAV L   +     + +I  Y+ L+DG+C +G+L  A
Sbjct: 422 GQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAA 481

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ELF SLP   L  NV TY+IMI GLC  G +DKA DL ++MEEN  +P+  T+++ ++G
Sbjct: 482 WELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQG 541

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +   E ++ I+ L  M++     DA+   I ++ L+ NE
Sbjct: 542 LLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTNE 581



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 150/463 (32%), Positives = 235/463 (50%), Gaps = 13/463 (2%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V H F  LG         D +T   +I  LC    +    ++   +   G EP V T T 
Sbjct: 99  VKHIFSSLG------IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTA 152

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+NGLC   +   A+ L + M        V       TY  +I+GLCK G    A E L 
Sbjct: 153 LINGLCVQGNVAQAVGLVDHMEKMRYPLDVY------TYGVLINGLCKTGDTLAAVEWLR 206

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M+++N KPNVV Y++++ G C     +EA  L  EM  +GV+PN+VT+  ++  LC  G
Sbjct: 207 KMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFG 266

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           +  E   LLD MI+ G+R D  T N L+D FC  G+V  AK +   M   G    VF+Y+
Sbjct: 267 RWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYN 326

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+ YC   ++  A+ ++  M+S+G  PD+V+  +L  G  +   + +   L +EM + 
Sbjct: 327 SLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKM 386

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D  T+ T I G C+ G  + A ELF  +       +++    ++DGLCK   L  A
Sbjct: 387 GFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEA 446

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           + L  ++    L  N+V YSI++ G+C+ G+++ A +LF  +    +  NV T+ ++I+G
Sbjct: 447 VSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKG 506

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVD-LLAKNEIS 465
             +     K  +LL  M+E   +PD    ++ V  LL K EI+
Sbjct: 507 LCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIA 549



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 206/439 (46%), Gaps = 8/439 (1%)

Query: 22  DAVTFTSLIKGLCAESRIM---EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +   F   ++ LC   ++    EA  LF  +      P V  +T L+  + R  H   A+
Sbjct: 37  NGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAI 96

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L + + +  G      E +T+T   +I+ LC+   V     +L  M    ++P V+T T
Sbjct: 97  SLVKHIFSSLG-----IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLT 151

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I G C   +  +A  L   M       +V T+ V+++ LCK G    A   L  M + 
Sbjct: 152 ALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEER 211

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
             +P+   Y+T++DG C  G V+ A  L   M   G +  + +Y+ LI G C     +  
Sbjct: 212 NWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKET 271

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            SL  EM+  G++ D+   N L     +  +V +A  +   M   G   D +TY + I  
Sbjct: 272 GSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHI 331

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C    + EA+ +FH +    C  DI  + SLI G CK   +   + L   +     VP+
Sbjct: 332 YCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPD 391

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVT++ +IGG C  G+   A++LFL+M +   VPN+ T  +++ G  + N  S+ + L  
Sbjct: 392 VVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAE 451

Query: 439 KMKEINVMPDASIVSIVVD 457
            M++ N+  +  I SI++D
Sbjct: 452 AMEKSNLDLNIVIYSILLD 470



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 142/274 (51%), Gaps = 6/274 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     V+G ++ +   PD  T+ SLI   C ++++ EA  +F  +   GC PD+  +
Sbjct: 301 GKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVF 360

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++G C+  +    ++L EEMA    + G V  P+ VT+TT+I G C+ G    AKEL
Sbjct: 361 TSLIHGWCKDKNINKVMHLLEEMA----KMGFV--PDVVTWTTLIGGFCQAGRPLAAKEL 414

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L M      PN+ T   ++ G C     +EA  L   M    +  N+V +++++D +C 
Sbjct: 415 FLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCS 474

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK++ A  L   +   G++ + +TY  ++ G C  G ++ A++L ++ME  GC     +
Sbjct: 475 AGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCT 534

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           Y++ + G    KEI  ++   + M  KG   D  
Sbjct: 535 YNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAA 568



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 123/252 (48%), Gaps = 4/252 (1%)

Query: 214 FCLTGRV---NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-G 269
            C +G+V   + A +LF  M SM    +V  +++L+    + K    A+SL   + S  G
Sbjct: 48  LCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLG 107

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           I+ D +  N +   L  +  V   F +   M + G+     T    I+GLC  G + +AV
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAV 167

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
            L   +  ++   D+  Y  LI+GLCK+G    A+E  R +      PNVV YS ++ GL
Sbjct: 168 GLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C DG + +A +L  +M    V PN++T+  LI+G        +   LL +M ++ +  D 
Sbjct: 228 CKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDL 287

Query: 450 SIVSIVVDLLAK 461
             ++I+VD   K
Sbjct: 288 QTLNILVDAFCK 299



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 12/273 (4%)

Query: 162 DQGVQPNVVTFNVIMDELCKNGK---MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL-- 216
           D     N   F + M  LCK+GK   +DEA  L   M      P    + TLL G  +  
Sbjct: 31  DTDSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDF-TLLLGVIVRL 89

Query: 217 ---TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
              T  ++  K +F    S+G +    + +I+IN  C+ K +    S+   M   G++P 
Sbjct: 90  KHYTTAISLVKHIF---SSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPT 146

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           V+    L  GL     V +A  L D M++     D +TY   I+GLCK G  + AVE   
Sbjct: 147 VMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLR 206

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +     + ++  Y++++DGLCK G +  AL L   +    + PN+VTY+ +I GLCN G
Sbjct: 207 KMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFG 266

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           +  +   L  +M +  +  ++ T ++L+  F +
Sbjct: 267 RWKETGSLLDEMIKMGMRLDLQTLNILVDAFCK 299



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 1/178 (0%)

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTLRILKCEFDI 344
           ++  ++ A  LF  M           +   +  + +  +   A+ L  H    L  E D 
Sbjct: 53  KVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADT 112

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
              N +I+ LC+   +     +  ++    L P V+T + +I GLC  G + +A  L   
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDH 172

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ME+     +V T+ +LI G  +  +    +E L KM+E N  P+  + S ++D L K+
Sbjct: 173 MEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKD 230


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 166/463 (35%), Positives = 272/463 (58%), Gaps = 6/463 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRVS    ++ R+++  + P+ VT  +LI GLC + R+ EA  L  ++  +GCE +  TY
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITY 212

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N +C++ +T +AL+LF +M   +       + + V Y+ +ID LCK+G +D A  L
Sbjct: 213 GPVLNRMCKSGNTALALDLFRKMEERS------IKASVVQYSIVIDSLCKDGNLDDALSL 266

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ K IK +VV Y+S+I G C    W++  ++  EM+ + + PNVVTF+ ++D   K
Sbjct: 267 FNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVK 326

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA  L + M+  G+ PD  TY++L+DGFC   R+  A ++   M S GC+  + +
Sbjct: 327 EGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVT 386

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILIN YCK K ++  + L+ E+ SKG+  D V +NTL  G  +  ++  A +LF EM 
Sbjct: 387 YSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMV 446

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV     TY   +DGLC NG + +A+E+F  ++  +    I  YN +I G+C + +++
Sbjct: 447 SRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVD 506

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF SL    + P+V+TY++MIGGLC  G + +A  LF  M+E+   P+  T+++LI
Sbjct: 507 DAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           R  +  +     +EL+ +MK      DAS + +VV +L+   +
Sbjct: 567 RAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGRL 609



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 230/454 (50%), Gaps = 6/454 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V+    +   +++S   P  + F+ L   +              ++ + G E +++T  
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++N  CR    + A ++         +FG   EPNT+T++T+I+G C EG V +A  L+
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRAL----KFGF--EPNTITFSTLINGFCLEGRVSEAVALV 162

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +   +PNVVT  ++I G C      EA  L   M+  G + N +T+  +++ +CK+
Sbjct: 163 DRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKS 222

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G    A  L   M +  ++     Y+ ++D  C  G ++ A  LF  ME  G K  V +Y
Sbjct: 223 GNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAY 282

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S +I G C +   +    +  EM+ + I P+VV  + L     +  ++  A +L++EM  
Sbjct: 283 SSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVA 342

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+A DT TY + IDG CK   + EA ++   +    CE +I  Y+ LI+  CK+ R++ 
Sbjct: 343 RGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDN 402

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            + LF  +    LV + VTY+ ++ G C  G+++ A++LF +M    V P+V+T+ +L+ 
Sbjct: 403 GMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLD 462

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           G     E  K +E+  KM++  ++    I +I++
Sbjct: 463 GLCDNGELQKALEIFEKMQKSRMILGIGIYNIII 496



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 225/446 (50%), Gaps = 6/446 (1%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC +   V++   ++    + ++ EA  LF  +      P +  ++ L + + R     +
Sbjct: 28  SCISEAKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDL 87

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
            L   +EM + NG      E N  T   +I+  C++  +  A  ++ +      +PN +T
Sbjct: 88  VLGFCKEM-DLNG-----IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTIT 141

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           ++++I GFC     +EA  L   M++   +PNVVT N +++ LC  G++ EA  L+D M+
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           ++G   +  TY  +L+  C +G    A +LF  ME    K +V  YSI+I+  CK+  ++
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLD 261

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            ALSL++EM  KGIK DVV ++++  GL    + +   K+  EM    +  +  T+   I
Sbjct: 262 DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D   K G ++EA EL++ +       D   Y+SLIDG CK  RL  A ++   +      
Sbjct: 322 DVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCE 381

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN+VTYSI+I   C   ++D    LF ++    +V + +T++ L++GF +  + +   EL
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
             +M    V P      I++D L  N
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDN 467


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  325 bits (833), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 173/442 (39%), Positives = 256/442 (57%), Gaps = 6/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T   +I  LC  +R+  A +   K+   G +PD  T+TTL+ GLC       AL+L
Sbjct: 78  PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 137

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F++M       G   +PN VTY T+I+GLCK+  V +A  +  +M  K I PN+VTY S+
Sbjct: 138 FDKM------IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C   +W     L  EM+D  + P+V T N ++D LCK G + EA  ++D+MI  GV
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TYN L+DG CL   V+ A ++F +M    C   V SY+ LINGYCK + ++ A+ 
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 311

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM  + + P+ V +NTL  GL  + +++ A  LF EM   G   D  TYRT  D LC
Sbjct: 312 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 371

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           KN ++ +A+ L   +     + DI+ Y +++DG+C++G LE A +LF +L    L PNV 
Sbjct: 372 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 431

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+IMI GLC  G + +A  LF +M +N   PN  T++++ RGF+R NE  + IELL +M
Sbjct: 432 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 491

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
                  D S  +++V +L+ +
Sbjct: 492 LARGFSVDVSTTTLLVGMLSDD 513



 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 146/401 (36%), Positives = 217/401 (54%), Gaps = 19/401 (4%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L     P  V FT L+  +          +L T++  FG  PDV+T   L+N  C   
Sbjct: 571 RMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLR 630

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A ++  ++     + G   +P+ VTY T+++GLCK             M  K I P
Sbjct: 631 RLGYAFSVLAKLL----KLGF--QPDVVTYGTLMNGLCK-------------MITKGISP 671

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           ++ TY S+I   C   +W     L  EM++  + PNVV F+ ++D LCK G +  A  ++
Sbjct: 672 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 731

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D+MI+ GV PD  TY  L+DG CL   ++ A ++F +M   GC   V SY+ILINGYC+ 
Sbjct: 732 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 791

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           + ++ A+ L  +M  +G+  D V +NTL  GL  + +++ A  LF EM  +G   D  TY
Sbjct: 792 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 851

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
           R  +D LCKN ++ EA+ L   +     + DI  YN  IDG+C++G LE A +LF +L  
Sbjct: 852 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 911

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
             L P+V TY+IMI GLC  G +D+A  LF  M+EN +  N
Sbjct: 912 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 212/422 (50%), Gaps = 29/422 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F  L +ILK    PDA TFT+LI+GLC E +I EA  LF K+   G +P+V T
Sbjct: 93  LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT 152

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV------------CE------------ 96
           Y TL+NGLC+      A N+F EM        +V            CE            
Sbjct: 153 YGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 212

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+  T  T++D LCKEG V +A +++  M  + ++PNVVTY +++ G C   + +
Sbjct: 213 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 272

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
            A ++F  M+ +    NV+++N +++  CK   +D+A  L + M +  + P+  TYNTL+
Sbjct: 273 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 332

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C  GR+  A  LF  M + G    + +Y  L +  CKN+ ++ A++L   +      
Sbjct: 333 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 392

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PD+ I+ T+  G+    ++E A  LF  +   G+  + WTY   I GLCK G + EA +L
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +    C  +   YN +  G  ++      +EL   +       +V T ++++G L +
Sbjct: 453 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 512

Query: 392 DG 393
           DG
Sbjct: 513 DG 514



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 185/349 (53%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D+A     +M  K   P+ V +  ++      K  +    L  +M   G+ P+V T  +
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++ LC   ++D A   L  +++ G +PDA T+ TL+ G C+ G++  A  LF  M   G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            +  V +Y  LING CK++++  A +++SEM++KGI P++V +N+L  GL ++ + +   
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            L +EM  + +  D +T  T +D LCK G + EA ++   +     E ++  YN+L+DG 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C    +++A+++F ++     V NV++Y+ +I G C    +DKA  LF +M    + PN 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +T++ LI G   +      I L H+M     +PD      + D L KN 
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNR 374



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 209/410 (50%), Gaps = 19/410 (4%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A + F ++      P    +T L+  + +  H    L+L  +M      FG+   P+  
Sbjct: 564 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM----DSFGI--PPDVY 617

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T   +I+  C    +  A  +L ++     +P+VVTY +++ G C             +M
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KM 664

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + +G+ P++ T+N ++  LC   +    + LL+ M+   + P+   ++T++D  C  G +
Sbjct: 665 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 724

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A ++   M   G +  V +Y+ L++G+C   E++ A+ ++  M+ KG  P+V  +N L
Sbjct: 725 AIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 784

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G  +I ++++A  L ++M   G+ ADT TY T I GLC  G +  A+ LFH +     
Sbjct: 785 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 844

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  Y  L+D LCK+  L  A+ L +++    L  +++ Y+I I G+C  G+++ ARD
Sbjct: 845 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARD 904

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
           LF ++    + P+V T++++I G  +     +  +L  KM E ++  +++
Sbjct: 905 LFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNST 954



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 220/506 (43%), Gaps = 71/506 (14%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
              +L  I  S + PD   +T+++ G+C    + +A  LF+ L   G +P+V+TY  +++
Sbjct: 379 AMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIH 438

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GLC+      A  LF EM N NG     C PN  TY  I  G  +     +  ELL +M 
Sbjct: 439 GLCKQGLLAEASKLFSEM-NKNG-----CSPNDCTYNLITRGFLRNNEALRTIELLEEML 492

Query: 127 DKNIKPNVVTYT-------------SVIRGFC---------------------------- 145
            +    +V T T             SV +  C                            
Sbjct: 493 ARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSL 552

Query: 146 -----YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ--- 197
                +    ++A   F  M+     P+ V F  ++  +    KM   S +L L  Q   
Sbjct: 553 HSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDS 609

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ PD +T N L++ FC   R+ +A  +   +  +G +  V +Y  L+NG CK      
Sbjct: 610 FGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK------ 663

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
                  M++KGI PD+  +N+L   L  + + +    L +EM  + +  +   + T +D
Sbjct: 664 -------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 716

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LCK G I  A ++   +     E D+  Y +L+DG C    ++ A+++F ++     VP
Sbjct: 717 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 776

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           NV +Y+I+I G C   +MDKA  L   M    ++ + +T++ LI G   +      I L 
Sbjct: 777 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 836

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNE 463
           H+M     +PD     I++D L KN 
Sbjct: 837 HEMVASGQIPDLVTYRILLDYLCKNH 862



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 178/361 (49%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TV +  ++  + K         L  QM    I P+V T   VI   C+    + A   
Sbjct: 43  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TF  ++  LC  GK+ EA  L D MI  G +P+  TY TL++G C 
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             +V  A  +F  M + G    + +Y+ LI+G CK  E +   +L +EM+   I PDV  
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            NT+   L +   V  A  + D M   GV  +  TY   +DG C    +  AV++F T+ 
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 282

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C  ++ +YN+LI+G CK   ++ A+ LF  +    L PN VTY+ +I GLC+ G++ 
Sbjct: 283 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 342

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  LF +M     +P+++T+  L     +     K + LL  ++  N  PD  I + ++
Sbjct: 343 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 402

Query: 457 D 457
           D
Sbjct: 403 D 403



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 160/340 (47%), Gaps = 42/340 (12%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+ + F VL ++LK  F PD VT+ +L+ GLC             K+   G  PD+FTY 
Sbjct: 631 RLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYN 677

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC--------------------------- 95
           +L++ LC          L  EM N      VV                            
Sbjct: 678 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 737

Query: 96  --EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
             EP+ VTYT ++DG C    +D+A ++   M  K   PNV +Y  +I G+C  +  ++A
Sbjct: 738 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 797

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             L  +M  QG+  + VT+N ++  LC  G++  A  L   M+  G  PD  TY  LLD 
Sbjct: 798 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C    +  A  L  ++E       +  Y+I I+G C+  E+E A  L+S + SKG++PD
Sbjct: 858 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 917

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           V  +N +  GL +   ++ A KLF +M  N + +++ + R
Sbjct: 918 VRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSR 957



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 119/230 (51%), Gaps = 6/230 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++    V+  ++K    PD VT+T+L+ G C  S + EA  +F  +   GC P+V +Y
Sbjct: 722 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+      A+ L E+M+      G++ +  TVTY T+I GLC  G +  A  L
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQ----GLIAD--TVTYNTLIHGLCHVGRLQHAIAL 835

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M      P++VTY  ++   C      EA  L   +    +  +++ +N+ +D +C+
Sbjct: 836 FHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCR 895

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
            G+++ A  L   +   G++PD  TYN ++ G C  G ++ A +LF  M+
Sbjct: 896 AGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 945



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+ H   +   ++ S   PD VT+  L+  LC    + EA  L   +     + D+  
Sbjct: 826 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 885

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y   ++G+CR      A +LF  +++         +P+  TY  +I GLCK G +D+A +
Sbjct: 886 YNIAIDGMCRAGELEAARDLFSNLSSKG------LQPDVRTYNIMIHGLCKRGLLDEANK 939

Query: 121 LLLQMKDKNIKPN 133
           L  +M + +I  N
Sbjct: 940 LFRKMDENDIWSN 952


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  325 bits (833), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 170/440 (38%), Positives = 256/440 (58%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G     F V   ILK  + P+A+T T+LIKGLC + +I +A     K+   G   +   
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  AL L   +       G + +PN V Y TIID +CK   V++A +
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAFD 217

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+VVTY+++I GFC     N+A  LF +M+ + + P+V TF++++D  C
Sbjct: 218 LYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFC 277

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ EA  +L +M++ G++PD  TY +L+DG+CL  +VN AK +F +M   G    V 
Sbjct: 278 KEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQ 337

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+ING+CK K+++ A++L+ EM  K I PDVV +N+L  GL +  ++  A KL DEM
Sbjct: 338 SYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM 397

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  D  TY + +D LCKN  + +A+ L   ++    + D+  Y  LIDGLCK GRL
Sbjct: 398 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRL 457

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +F  L        V TY++MI G C++   DKA  L   ME+N  +PN  T++++
Sbjct: 458 KDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEII 517

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I      +E     +LL +M
Sbjct: 518 ILSLFEKDENDMAEKLLREM 537



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 147/443 (33%), Positives = 238/443 (53%), Gaps = 7/443 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VTF  LI           + ++F  +   G EP+  T TTL+ GLC       AL+  
Sbjct: 90  DLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFH 149

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +++         VC      Y T+I+GLCK G    A +LL ++  K ++PNVV Y ++I
Sbjct: 150 DKVVALGFHLNKVC------YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTII 203

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C  K  NEA  L+ EM+ +G+ P+VVT++ ++   C  GK+++A  L + MI   + 
Sbjct: 204 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEIN 263

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD +T++ L+DGFC  GRV  AK +   M   G K  V +Y  L++GYC  K++  A S+
Sbjct: 264 PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSI 323

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           ++ M   G+  +V  +N +  G  +I +V+ A  LF EM    +  D  TY + IDGLCK
Sbjct: 324 FNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCK 383

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           +G I  A++L   +       D   YNS++D LCK+ +++ A+ L   +    + P++ T
Sbjct: 384 SGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYT 443

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+I+I GLC  G++  A+++F D+        V T+ ++I+GF   +   K + LL KM+
Sbjct: 444 YTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503

Query: 442 EINVMPDASIVSIVV-DLLAKNE 463
           +   +P+A    I++  L  K+E
Sbjct: 504 DNGCIPNAKTYEIIILSLFEKDE 526



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 169/305 (55%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++    +  +++     PD  TF+ L+ G C E R+ EA  +   +   G +PDV T
Sbjct: 244 LGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVT 303

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G C       A ++F  MA G    GV    N  +Y  +I+G CK   VD+A  
Sbjct: 304 YCSLMDGYCLVKQVNKAKSIFNTMAQG----GVTA--NVQSYNIMINGFCKIKKVDEAMN 357

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  KNI P+VVTY S+I G C +   + A +L  EM D+GV  + +T+N I+D LC
Sbjct: 358 LFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALC 417

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN ++D+A  LL  M   G++PD +TY  L+DG C  GR+  A+ +F  +   G   TV+
Sbjct: 418 KNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVY 477

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I G+C N   + AL+L S+M   G  P+   +  + + LFE  + + A KL  EM
Sbjct: 478 TYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537

Query: 301 QRNGV 305
              G+
Sbjct: 538 IARGL 542



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 187/367 (50%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P    +  I+  L K      A  L  +M+   I  ++VT+  +I  F      + +  +
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F  ++ +G +PN +T   ++  LC  G++ +A    D ++  G   +   Y TL++G C 
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G+ + A +L   ++    +  V  Y+ +I+  CK K +  A  LYSEM+SKGI PDVV 
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           ++ L  G   + ++  A  LF++M    +  D +T+   +DG CK G + EA  +   + 
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + D+  Y SL+DG C   ++  A  +F ++  G +  NV +Y+IMI G C   ++D
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A +LF +M    ++P+V+T++ LI G  +  + S  ++L+ +M +  V  D    + ++
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413

Query: 457 DLLAKNE 463
           D L KN 
Sbjct: 414 DALCKNH 420



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 172/334 (51%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N  P +  +  ++        +  A  L  EM   G+  ++VTFN++++   + G    +
Sbjct: 51  NPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFS 110

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             +   +++ G  P+A T  TL+ G CL G+++ A      + ++G       Y  LING
Sbjct: 111 FSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLING 170

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK  +   AL L   +  K ++P+VV++NT+   + ++  V  AF L+ EM   G++ D
Sbjct: 171 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 230

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY   I G C  G + +A+ LF+ +   +   D+  ++ L+DG CK GR++ A  +  
Sbjct: 231 VVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLA 290

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    + P+VVTY  ++ G C   Q++KA+ +F  M +  V  NV +++++I GF +I 
Sbjct: 291 MMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIK 350

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +  + + L  +M   N++PD    + ++D L K+
Sbjct: 351 KVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKS 384



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 147/305 (48%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F  +++    P +  F  I+  L K      A  L   M  +G+  D  T+N L++ F  
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + +  +F ++   G +    + + LI G C   +I  AL  + ++++ G   + V 
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + TL  GL ++ Q   A +L   +    V  +   Y T ID +CK   + EA +L+  + 
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 D+  Y++LI G C  G+L  A+ LF  +    + P+V T+SI++ G C +G++ 
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A+++   M +  + P+V+T+  L+ G+  + + +K   + + M +  V  +    +I++
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 457 DLLAK 461
           +   K
Sbjct: 344 NGFCK 348



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 35/238 (14%)

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR----- 313
           +S ++ +L+    P +     +   L +I+  + A  L  EM+ NG+A+D  T+      
Sbjct: 41  VSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINC 100

Query: 314 ------------------------------TFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                                         T I GLC  G I +A+     +  L    +
Sbjct: 101 FSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLN 160

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              Y +LI+GLCK G+   AL+L R +   ++ PNVV Y+ +I  +C    +++A DL+ 
Sbjct: 161 KVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 220

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +M    + P+V+T+  LI GF  + + +  I L +KM    + PD    SI+VD   K
Sbjct: 221 EMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCK 278


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  325 bits (833), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 166/462 (35%), Positives = 266/462 (57%), Gaps = 6/462 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +  V     V G++ K    PD +TFT+LI G+C E +I  A  L+ ++   G EPDV +
Sbjct: 141 LNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVIS 200

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC + +T +A+++F++M   NG     C+PN VTY TIID LCK+  V+ A +
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQ-NG-----CKPNVVTYNTIIDSLCKDRLVNDAMD 254

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +M  + I P+ +TY S++ G C     NEA RLF  M   G +P+VVT+N+I+D L 
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+  +++A+  L  M+  G+ PD  TY T+L G C  G++N A  LF  ME  GCK  V 
Sbjct: 315 KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVV 374

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I+  CK++ +  A+   SEM+ +GI P+ V ++T+  G   + Q++ A +LF EM
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               V  +T T+   +DGLC+ G + EA  +F T+     E +I  YN+L++G C   ++
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A ++F  +      P++ +Y+I+I G CN  +MDKA+ L   M    + PN +T++ +
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTI 554

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++G   +       EL  KM    ++P     SI+++ L K+
Sbjct: 555 MKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKH 596



 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 149/414 (35%), Positives = 248/414 (59%), Gaps = 9/414 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++    +  R+ ++   PD VT+  +I  L  +  + +AA   +++   G  PDV T
Sbjct: 281 LGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVT 340

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT+++GLC       A+ LF++M          C+P+ V Y TIID LCK+  V+ A E
Sbjct: 341 YTTILHGLCYLGQLNEAIRLFKKMEQKG------CKPDVVAYNTIIDSLCKDRLVNDAME 394

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +M D+ I PN VTY++++ GFC     +EA +LF EM+ + V PN +TF++++D LC
Sbjct: 395 FLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLC 454

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G + EA  + + M + GV P+ +TYN L++G+CL  ++N A+++F  M   GC   + 
Sbjct: 455 QEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLH 514

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILINGYC ++ ++ A +L ++M  K + P+ V +NT+  GL  + ++  A +LF +M
Sbjct: 515 SYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKM 574

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G+     TY   ++GLCK+G++ EA++LF +++  K E DI  Y  LI+G+   G+L
Sbjct: 575 CSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKL 634

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD---MEENAVV 411
           E+A  LF  L    + P   TY++MI GL  +G  D+A +LF     M+ N ++
Sbjct: 635 EVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHNVII 688



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/464 (32%), Positives = 250/464 (53%), Gaps = 6/464 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  +    V  ++ ++   P+ VT+ ++I  LC +  + +A    +++   G  PD  TY
Sbjct: 212 GNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITY 271

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++V+GLC       A  LF+ M   NG     C+P+ VTY  IID L K+  V+ A + 
Sbjct: 272 NSIVHGLCCLGQLNEATRLFKRMEQ-NG-----CKPDVVTYNIIIDSLYKDRLVNDAADF 325

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D+ I P+VVTYT+++ G CY    NEA RLF +M  +G +P+VV +N I+D LCK
Sbjct: 326 LSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCK 385

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +  +++A   L  M+  G+ P+A TY+T+L GFC  G+++ A +LF  M          +
Sbjct: 386 DRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLT 445

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +SIL++G C+   +  A  ++  M  KG++P++  +N L  G     ++  A K+F+ M 
Sbjct: 446 FSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMV 505

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G A D  +Y   I+G C +  + +A  L   + + K   +   YN+++ GLC  GRL 
Sbjct: 506 GKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLL 565

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ELF+ +    ++P ++TYSI++ GLC  G +D+A  LF  M+E  + P++I + +LI
Sbjct: 566 DAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILI 625

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
            G     +      L  K+    + P     ++++  L K  +S
Sbjct: 626 EGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLS 669



 Score =  272 bits (695), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 140/420 (33%), Positives = 240/420 (57%), Gaps = 9/420 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  V F   +  +    +      L  ++ +FG    V++   L+N LCR +H   A+++
Sbjct: 91  PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSV 150

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + +M      F +  +P+ +T+TT+I+G+C EG +  A EL  +M     +P+V++Y ++
Sbjct: 151 WGKM------FKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTL 204

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C + + N A  +F +M   G +PNVVT+N I+D LCK+  +++A   L  M+  G+
Sbjct: 205 INGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGI 264

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PDA TYN+++ G C  G++N A  LF  ME  GCK  V +Y+I+I+   K++ +  A  
Sbjct: 265 PPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAAD 324

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
             SEM+ +GI PDVV + T+  GL  + Q+  A +LF +M++ G   D   Y T ID LC
Sbjct: 325 FLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLC 384

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+  + +A+E    +       +   Y++++ G C  G+L+ A +LF+ +    ++PN +
Sbjct: 385 KDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTL 444

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF---IRINEPSKVIELL 437
           T+SI++ GLC +G + +AR +F  M E  V PN+ T++ L+ G+    ++NE  KV E++
Sbjct: 445 TFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM 504



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 137/421 (32%), Positives = 237/421 (56%), Gaps = 6/421 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA+T+ S++ GLC   ++ EA  LF ++   GC+PDV TY  +++ L +      A + 
Sbjct: 266 PDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADF 325

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM +          P+ VTYTTI+ GLC  G +++A  L  +M+ K  KP+VV Y ++
Sbjct: 326 LSEMVDQG------IPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTI 379

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  +  N+A     EM+D+G+ PN VT++ I+   C  G++DEA++L   M+   V
Sbjct: 380 IDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNV 439

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  T++ L+DG C  G V+ A+ +F +M   G +  +++Y+ L+NGYC   ++  A  
Sbjct: 440 MPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARK 499

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++  M+ KG  PD+  +N L  G     ++++A  L  +M    +  +T TY T + GLC
Sbjct: 500 VFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLC 559

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G +++A ELF  +        +  Y+ L++GLCK G L+ AL+LF+S+    L P+++
Sbjct: 560 YVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDII 619

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+I+I G+   G+++ A+ LF  +  + + P   T++++I+G ++     +  EL  K 
Sbjct: 620 LYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKW 679

Query: 441 K 441
           K
Sbjct: 680 K 680



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 204/409 (49%), Gaps = 8/409 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A A F ++      P +  +   +  + +       + L  +M      FGV    +TV
Sbjct: 76  DALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQM----DLFGVT---HTV 128

Query: 101 -TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
            +   +I+ LC+   VD A  +  +M    I+P+V+T+T++I G C       A  L+ E
Sbjct: 129 YSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNE 188

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+  G +P+V+++N +++ LC +G  + A  +   M Q+G +P+  TYNT++D  C    
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRL 248

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           VN A +    M   G      +Y+ +++G C   ++  A  L+  M   G KPDVV +N 
Sbjct: 249 VNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNI 308

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +   L++   V  A     EM   G+  D  TY T + GLC  G + EA+ LF  +    
Sbjct: 309 IIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKG 368

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C+ D+ AYN++ID LCK   +  A+E    +    + PN VTYS ++ G CN GQ+D+A 
Sbjct: 369 CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEAT 428

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            LF +M    V+PN +TF +L+ G  +    S+   +   M E  V P+
Sbjct: 429 QLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPN 477



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 181/382 (47%), Gaps = 35/382 (9%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           VD A     +M   N +P++V +   +      K ++    L  +M   GV   V + N+
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++ LC+   +D A  +   M + G++PD  T+ TL++G C  G++  A EL+  M   G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 235 CKHTVFSYSILING-----------------------------------YCKNKEIEGAL 259
            +  V SY+ LING                                    CK++ +  A+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
              SEM+ +GI PD + +N++  GL  + Q+  A +LF  M++NG   D  TY   ID L
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K+  + +A +    +       D+  Y +++ GLC  G+L  A+ LF+ +      P+V
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           V Y+ +I  LC D  ++ A +   +M +  + PN +T+  ++ GF  + +  +  +L  +
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M   NVMP+    SI+VD L +
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQ 455



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 8/276 (2%)

Query: 197 QHGVRPDAFTYNTLLD----GFCL----TGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           +H +    FT N  L     GF      T  V+ A   F  M  M  + ++  +   +  
Sbjct: 43  RHHITTSTFTKNPSLPKKNGGFASNSSNTISVDDALASFYRMARMNPRPSIVEFGKFLGS 102

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
             K K+    + L ++M   G+   V   N L   L  ++ V+ A  ++ +M + G+  D
Sbjct: 103 IAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPD 162

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             T+ T I+G+C  G I  AVEL++ +     E D+ +YN+LI+GLC SG   +A+ +F+
Sbjct: 163 VITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFK 222

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +      PNVVTY+ +I  LC D  ++ A D   +M    + P+ IT++ ++ G   + 
Sbjct: 223 KMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLG 282

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           + ++   L  +M++    PD    +I++D L K+ +
Sbjct: 283 QLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRL 318


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  325 bits (832), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 171/460 (37%), Positives = 256/460 (55%), Gaps = 6/460 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V+ GF VLG + K    P  +T T+LI GLC +  + +A  L   +       DV+TY  
Sbjct: 128 VAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGV 187

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+NGLC+T  T+ A+    +M   N +      PN V Y+TI+DGLCK+G V +A  L  
Sbjct: 188 LINGLCKTGDTLAAVGWLRKMEERNWK------PNVVVYSTIMDGLCKDGLVSEALNLCS 241

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M  K ++PN+VTY  +I+G C    W EA  L  EMM  G++P++   N+++D  CK G
Sbjct: 242 EMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEG 301

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ +A  ++  MI  G  PD FTYN+L+  +CL  ++N A  +F  M S G    +  ++
Sbjct: 302 KVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFT 361

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G+CK+K I  A+ L  EM   G  PDV    TL  G  +  +   A +LF  M + 
Sbjct: 362 SLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKY 421

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  T    +DGLCK   + EAV L   +     + +I  Y+ L+DG+C +G+L  A
Sbjct: 422 GQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAA 481

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ELF SLP   L  NV  Y+IMI GLC  G +DKA DL ++MEEN  +PN  T+++ ++G
Sbjct: 482 WELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQG 541

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +   E ++ I+ L  M++     DA+    +++ L+ NE
Sbjct: 542 LLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTNE 581



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 206/431 (47%), Gaps = 8/431 (1%)

Query: 30  IKGLCAESR---IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
           ++ LC   +   I EA  LF  +      P V  +T L+  + R  H   A++L + M +
Sbjct: 45  MRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFS 104

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
             G      E +T+T   +I+ LC+   V     +L  M    ++P V+T T++I G C 
Sbjct: 105 SLG-----IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCV 159

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
             +  +A  L   M       +V T+ V+++ LCK G    A   L  M +   +P+   
Sbjct: 160 QGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVV 219

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y+T++DG C  G V+ A  L   M   G +  + +Y+ LI G C     + A SL  EM+
Sbjct: 220 YSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMM 279

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G++PD+ + N L     +  +V +A  +   M   G   D +TY + I   C    + 
Sbjct: 280 KMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMN 339

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA+ +FH +       DI  + SLI G CK   +  A+ L   +     VP+V T++ +I
Sbjct: 340 EAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLI 399

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
           GG C  G+   A++LFL+M +   VPN+ T  +++ G  + N  S+ + L   M++ N+ 
Sbjct: 400 GGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLD 459

Query: 447 PDASIVSIVVD 457
            +  I SI++D
Sbjct: 460 LNIVIYSILLD 470



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 123/252 (48%), Gaps = 4/252 (1%)

Query: 214 FCLTGR---VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-G 269
            C +G+   ++ A +LF  M  M    +V  +++L+    + K    A+SL   M S  G
Sbjct: 48  LCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLG 107

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           I+ D +  N +   L  +  V   F +   M + G+     T  T I+GLC  G + +AV
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAV 167

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
            L   +  +    D+  Y  LI+GLCK+G    A+   R +      PNVV YS ++ GL
Sbjct: 168 GLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C DG + +A +L  +M    V PN++T+  LI+G        +   LL +M ++ + PD 
Sbjct: 228 CKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDL 287

Query: 450 SIVSIVVDLLAK 461
            +++I+VD   K
Sbjct: 288 QMLNILVDAFCK 299



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 3/201 (1%)

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           +E  S G +  + + N  + G  ++  ++ A  LF  M R         +   +  + + 
Sbjct: 32  TESHSNGTQLLISMRNLCWSG--KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRL 89

Query: 323 GYIVEAVELF-HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            +   A+ L  H    L  E D    N +I+ LC+   +     +  ++    L P V+T
Sbjct: 90  KHYTTAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMT 149

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
            + +I GLC  G + +A  L   ME+     +V T+ +LI G  +  +    +  L KM+
Sbjct: 150 LTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKME 209

Query: 442 EINVMPDASIVSIVVDLLAKN 462
           E N  P+  + S ++D L K+
Sbjct: 210 ERNWKPNVVVYSTIMDGLCKD 230


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  325 bits (832), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 176/488 (36%), Positives = 271/488 (55%), Gaps = 29/488 (5%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++S  F  +G+I+K  + PD VTF++LI GLC E R+ EA  L  ++   G +P + T  
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGE---------FGVVCEP---------------- 97
            LVNGLC       A+ L + M     +           V+C+                 
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241

Query: 98  ----NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
               + V Y+ IIDGLCK+G +D A  L  +M+ K  K +++ YT++IRGFCYA  W++ 
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            +L  +M+ + + P+VV F+ ++D   K GK+ EA  L   MIQ G+ PD  TY +L+DG
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           FC   +++ A  +   M S GC   + +++ILINGYCK   I+  L L+ +M  +G+  D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V +NTL  G  E+ ++E A +LF EM    V  D  +Y+  +DGLC NG   +A+E+F 
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +   K E DI  YN +I G+C + +++ A +LF SLP   + P+V TY+IMIGGLC  G
Sbjct: 482 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            + +A  LF  MEE+   PN  T+++LIR  +   + +K  +L+ ++K      DAS + 
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLR 601

Query: 454 IVVDLLAK 461
             +  LA+
Sbjct: 602 FALSTLAR 609



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 233/436 (53%), Gaps = 6/436 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  + F+ L   +    +      L  ++ + G   +++T + ++N  CR     +A + 
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             ++     + G   EP+TVT++T+I+GLC EG V +A EL+ +M +   KP ++T  ++
Sbjct: 130 MGKII----KLGY--EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNAL 183

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C     ++A  L   M++ G QPN VT+  ++  +CK+G+   A  LL  M +  +
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI 243

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + DA  Y+ ++DG C  G +++A  LF  ME  G K  +  Y+ LI G+C     +    
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +M+ + I PDVV  + L     +  ++  A +L  EM + G++ DT TY + IDG C
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + +A  +   +    C  +IR +N LI+G CK+  ++  LELFR +    +V + V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I G C  G+++ A++LF +M    V P+++++ +L+ G     EP K +E+  K+
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483

Query: 441 KEINVMPDASIVSIVV 456
           ++  +  D  I +I++
Sbjct: 484 EKSKMELDIGIYNIII 499



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 220/446 (49%), Gaps = 13/446 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF ++      P +  ++ L + + RT    + L+L ++M     E   +   N  
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM-----ELKGIAH-NLY 108

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T + +I+  C+   +  A   + ++     +P+ VT++++I G C     +EA  L   M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           ++ G +P ++T N +++ LC NGK+ +A  L+D M++ G +P+  TY  +L   C +G+ 
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A EL   ME    K     YSI+I+G CK+  ++ A +L++EM  KG K D++I+ TL
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G     + +   KL  +M +  +  D   +   ID   K G + EA EL   +     
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348

Query: 341 EFDIRAYNSLIDGLCKSGRLEIA---LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
             D   Y SLIDG CK  +L+ A   L+L  S  CG   PN+ T++I+I G C    +D 
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG---PNIRTFNILINGYCKANLIDD 405

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +LF  M    VV + +T++ LI+GF  + +     EL  +M    V PD     I++D
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465

Query: 458 LLAKNEISLNSLPSF-TVHEQQEEVD 482
            L  N     +L  F  + + + E+D
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELD 491



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 180/357 (50%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A +L  +M     +P ++ ++ +       K ++    L  +M  +G+  N+ T +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++  C+  K+  A   +  +I+ G  PD  T++TL++G CL GRV+ A EL   M  MG 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           K T+ + + L+NG C N ++  A+ L   M+  G +P+ V +  +   + +  Q   A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M+   +  D   Y   IDGLCK+G +  A  LF+ + I   + DI  Y +LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
            +GR +   +L R +    + P+VV +S +I     +G++ +A +L  +M +  + P+ +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           T+  LI GF + N+  K   +L  M      P+    +I+++   K  +  + L  F
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 175/381 (45%), Gaps = 65/381 (17%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++   +PD VT+TSLI G C E+++ +A  +   +   GC P++ T+  L+NG C+ + 
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
               L LF +M+      GVV   +TVTY T+I G C+ G ++ AKEL  +M  + ++P+
Sbjct: 403 IDDGLELFRKMS----LRGVV--ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456

Query: 134 VVTY-----------------------------------TSVIRGFCYAKDWNEAKRLFI 158
           +V+Y                                     +I G C A   ++A  LF 
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            +  +GV+P+V T+N+++  LCK G + EA  L   M + G  P+  TYN L+      G
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576

Query: 219 RVNHAKEL----------------------FVSMESMGCKHTVFSYSILINGYC--KNKE 254
               + +L                         M   G +  VF+++ L+  +C  +N  
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENAS 636

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  A +L+  M + G KP+VV +NT+  GL   + + +   + D+M   G   +  T  T
Sbjct: 637 VYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKST 696

Query: 315 FIDGLCKNGYIVEAVELFHTL 335
           FI GLCK      A+ L   +
Sbjct: 697 FISGLCKQDLHGSAILLLRKM 717



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 148/327 (45%)

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           V+Y   +R        ++A  LF EM     +P ++ F+ +   + +  + D    L   
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   G+  + +T + +++  C   +++ A      +  +G +    ++S LING C    
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  AL L   M+  G KP ++  N L  GL    +V  A  L D M   G   +  TY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +  +CK+G    A+EL   +   K + D   Y+ +IDGLCK G L+ A  LF  +    
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
              +++ Y+ +I G C  G+ D    L  DM +  + P+V+ F  LI  F++  +  +  
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
           EL  +M +  + PD    + ++D   K
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCK 364



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 30/255 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       +  +I KS    D   +  +I G+C  S++ +A  LF  L + G +PDV TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ GLC+      A  LF +M   +G       PN  TY  +I     EG   K+ +L
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEE-DGH-----SPNGCTYNILIRAHLGEGDATKSAKL 584

Query: 122 ----------------------LLQMKDKNIKPNVVTYTSVIRGFCYAKDWN--EAKRLF 157
                                 L +M     +P+V T+T+++R FC  ++ +  +A  LF
Sbjct: 585 IEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLF 644

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M   G +PNVVT+N ++  L     + +   +LD M + G +P+A T +T + G C  
Sbjct: 645 KNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ 704

Query: 218 GRVNHAKELFVSMES 232
                A  L   ME+
Sbjct: 705 DLHGSAILLLRKMEN 719



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 39/70 (55%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + P+ VT+ ++IKGL   + I +   +  ++   GC+P+  T +T ++GLC+      A+
Sbjct: 652 YKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAI 711

Query: 79  NLFEEMANGN 88
            L  +M N N
Sbjct: 712 LLLRKMENDN 721


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  325 bits (832), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 177/477 (37%), Positives = 279/477 (58%), Gaps = 11/477 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F V  +ILK  + PD +TFT+LIKGLC + +I +A     K+   G   D  +
Sbjct: 133 LGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQIS 192

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++GLC+   T  AL+L + + +GN     + +PN V Y TIID +CK   V++A +
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRV-DGN-----LVQPNVVMYNTIIDSMCKVKLVNEAFD 246

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+VVTY+++I GFC     N+A  LF +M+ + ++P+V TFN++++  C
Sbjct: 247 LFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFC 306

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+GKM E   + D+M++ G++P+  TYN+L+DG+CL   VN AK +F +M   G    + 
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYSI+ING+CK K+ + A++L+ EM  K I PDVV +++L  GL +  ++  A +L D+M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV     TY + +D LCK   + +A+ L   L+    + ++  Y+ LI GLC+SG+L
Sbjct: 427 HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKL 486

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A ++F  L       NV TY+IMI G C +G  ++A  L   ME+N  +P+  T++++
Sbjct: 487 EDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           I    + +E     +LL +M    V P      I +    K E  ++S P  T+ EQ
Sbjct: 547 ILSLFKKDENDMAEKLLREMIARGVRPR----QIAIWFQKKKEYDVSSEPK-TLTEQ 598



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 246/511 (48%), Gaps = 77/511 (15%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           ++++S      + + + +A +LF +L      P  F +  ++  L ++ H    L L ++
Sbjct: 51  ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQK 110

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M     EF  + +PN V    +I+  C+ G +  A  +  ++      P+ +T+T++I+G
Sbjct: 111 M-----EFRGI-KPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKG 164

Query: 144 FCYAKDWNEA-------------------------------KRLFIEMMDQG----VQPN 168
            C      +A                                R  ++++ +     VQPN
Sbjct: 165 LCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPN 224

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           VV +N I+D +CK   ++EA  L   MI  G+ PD  TY+ L+ GFC+ G++N A +LF 
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFN 284

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M     K  V++++IL+N +CK+ +++   +++  M+ +GIKP+ V +N+L  G   + 
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           +V +A  +F+ M + GV  D  +Y   I+G CK     EA+ LF  +       D+  Y+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 349 SLIDGLCKSGRLEIALELF-----RSLP-------------CGV---------------- 374
           SLIDGL KSGR+  AL+L      R +P             C +                
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464

Query: 375 -LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + PN+ TYSI+I GLC  G+++ AR +F  +       NV T+ ++I+GF      ++ 
Sbjct: 465 GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEA 524

Query: 434 IELLHKMKEINVMPDASIVSIVV-DLLAKNE 463
           + LL KM++   +PDA    I++  L  K+E
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 190/365 (52%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N ++Y++          VD A  L  ++  +N  P    +  ++     +K ++    L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M  +G++PN+V  N++++  C+ G +  A  +   +++ G  PD  T+ TL+ G CL 
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G++  A      + ++G      SY  LI+G CK  E   AL L   +    ++P+VV++
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           NT+   + ++  V  AF LF EM   G++ D  TY   I G C  G + +A++LF+ + +
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              + D+  +N L++  CK G+++    +F  +    + PN VTY+ ++ G C   +++K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A+ +F  M +  V P++ ++ ++I GF +I +  + + L  +M   N++PD    S ++D
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 458 LLAKN 462
            L+K+
Sbjct: 409 GLSKS 413



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 160/331 (48%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           K N ++Y+S    F    D ++A  LF  ++ +   P    FN I+  L K+        
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M   G++P+    N L++ FC  G +  A  +F  +  MG      +++ LI G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
              +I+ A   + ++++ G   D + + TL  GL ++ +   A  L   +  N V  +  
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            Y T ID +CK   + EA +LF  +       D+  Y++LI G C  G+L  A++LF  +
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               + P+V T++I++   C DG+M + + +F  M +  + PN +T++ L+ G+  + E 
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +K   + + M +  V PD    SI+++   K
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  324 bits (830), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 164/440 (37%), Positives = 266/440 (60%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F VLG+ILK  + P+ +  T+L+KGLC +  + ++     K+   G + +  +
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  A+ L   + + +        P+ V Y TIIDGLCK+  V++A +
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRS------TRPDVVMYNTIIDGLCKDKLVNEAYD 293

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M  + I P+V+TY+++I GFC A     A  L  EM  + + P+V T+ +++D LC
Sbjct: 294 FYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALC 353

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  LL +M + GV+P+  TY+TL+DG+CL G V++AK++F +M       +V 
Sbjct: 354 KEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVC 413

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+ING CK K ++ A++L  EML K + P+ V +N+L  GL +  ++  A  L  E+
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G  AD  TY + +DGLCKN  + +A+ LF  ++    + +   Y +LIDGLCK  RL
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARL 533

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A +LF+ +       +V TY++MIGGLC +G +D+A  +   ME+N  +P+ +TF+++
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEII 593

Query: 421 IRGFIRINEPSKVIELLHKM 440
           IR     +E  K  +LLH+M
Sbjct: 594 IRSLFEKDENDKAEKLLHEM 613



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 242/512 (47%), Gaps = 57/512 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKG--LCA-------ESR------------- 38
           +G+++  F VLG+ILK  + P+++T T+L+KG   CA       E R             
Sbjct: 24  LGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPRMIEDRSTRPLMWLSSSLS 83

Query: 39  -----------------------------IMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
                                        + +A + F  + +    P +  +  ++  L 
Sbjct: 84  HSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLLMRNTPSIIEFGKILGSLV 143

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +  H   A++L ++M           EP+ VT + +I+  C  G +  +  +L ++    
Sbjct: 144 KMKHFPTAISLSKQMEVKG------IEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 197

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +PN +  T++++G C   +  ++     +++ QG Q N V++  +++ LCK G+   A 
Sbjct: 198 YQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAI 257

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           +LL ++     RPD   YNT++DG C    VN A + +  M S G    V +YS LI G+
Sbjct: 258 KLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGF 317

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C   ++ GA SL +EM  K I PDV  +  L   L +  +++ A  L   M + GV  + 
Sbjct: 318 CLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNV 377

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY T +DG C  G +  A ++FH +   +    + +YN +I+GLCK   ++ A+ L R 
Sbjct: 378 VTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLRE 437

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    +VPN VTY+ +I GLC  G++  A DL  ++       +VIT+  L+ G  +   
Sbjct: 438 MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQN 497

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             K I L  KMKE  + P+    + ++D L K
Sbjct: 498 LDKAIALFMKMKERGIQPNKYTYTALIDGLCK 529



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 164/314 (52%), Gaps = 10/314 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F +L  +      PD  T+T LI  LC E ++ EA  L   +   G +P+V TY
Sbjct: 321 GQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTY 380

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL++G C       A  +F  M            P+  +Y  +I+GLCK   VD+A  L
Sbjct: 381 STLMDGYCLVGEVHNAKQIFHAMVQTE------VNPSVCSYNIMINGLCKGKSVDEAMNL 434

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  KN+ PN VTY S+I G C +     A  L  E+  +G   +V+T+  ++D LCK
Sbjct: 435 LREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCK 494

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N  +D+A  L   M + G++P+ +TY  L+DG C   R+ +A++LF  +   GC   V++
Sbjct: 495 NQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYT 554

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+++I G CK   ++ AL++ S+M   G  PD V    +   LFE  + ++A KL  EM 
Sbjct: 555 YNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM- 613

Query: 302 RNGVAADTWTYRTF 315
              +A     +R F
Sbjct: 614 ---IAKGLLHFRNF 624



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 127/237 (53%), Gaps = 6/237 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V +   +   ++++   P   ++  +I GLC    + EA  L  ++      P+  T
Sbjct: 390 VGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVT 449

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++GLC++     AL+L +E+ +  G+       + +TYT+++DGLCK   +DKA  
Sbjct: 450 YNSLIDGLCKSGRITSALDLMKELHH-RGQ-----PADVITYTSLLDGLCKNQNLDKAIA 503

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L ++MK++ I+PN  TYT++I G C       A++LF  ++ +G   +V T+NV++  LC
Sbjct: 504 LFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLC 563

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
           K G +DEA  +   M  +G  PDA T+  ++         + A++L   M + G  H
Sbjct: 564 KEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLH 620



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/302 (18%), Positives = 124/302 (41%), Gaps = 19/302 (6%)

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
           +G+ PN+VT +++++ L   G+M  +  +L  +++ G +P++ T  TL+ G         
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG-----ETRC 59

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
           A +L   +E    +  ++  S L +            +      S+      V+H+    
Sbjct: 60  AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHD---- 115

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
                     A   F+ M           +   +  L K  +   A+ L   + +   E 
Sbjct: 116 ----------AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEP 165

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D+   + LI+  C  G++  +  +   +      PN +  + ++ GLC  G++ K+    
Sbjct: 166 DLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFH 225

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             +       N +++  L+ G  +I E    I+LL  +++ +  PD  + + ++D L K+
Sbjct: 226 DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKD 285

Query: 463 EI 464
           ++
Sbjct: 286 KL 287


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  324 bits (830), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 165/463 (35%), Positives = 269/463 (58%), Gaps = 6/463 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     ++  ++ S   PD +T  +++ GLC + R+ EA  L  ++   GC+P+ FTY
Sbjct: 174 GRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTY 233

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N +C++ +T  AL+L  +M +         +P+ VTYT IID LCK+G +D A   
Sbjct: 234 GPILNRMCKSGNTASALDLLRKMEHRK------IKPHVVTYTIIIDNLCKDGRLDDALSF 287

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ K IK NV TY S+I  FC    W++  +L  +M+ + + PNVVTF+ ++D L K
Sbjct: 288 FSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVK 347

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA  L + MI  G+ P+  TYN+L+ G C   R++ A ++   M S GC   +++
Sbjct: 348 EGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWT 407

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILING+CK K+++  + L+ +M  +G+  D V ++TL  G  +  ++  A K+F EM 
Sbjct: 408 YNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMV 467

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV     TY   +DGLC NG + EA+ +   +   K E DI  YN +I G+C + +++
Sbjct: 468 SQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVD 527

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF SLP   +  ++ +Y+IM+ GLC    + +A  LF  M+E+   P+  T++ LI
Sbjct: 528 DAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLI 587

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           R  +R N+ +  ++L+ +MK      DAS V IV+D+L+  E+
Sbjct: 588 RAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGEL 630



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 228/444 (51%), Gaps = 8/444 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           +L+S   P  + F  L  GL A ++  +   AL  ++ + G   D++T   ++N  CR  
Sbjct: 81  MLRSRPLPTVIDFNRLF-GLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRR 139

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A +   ++      F +  EPNTVT+ T+++GLC EG V +A EL+  M      P
Sbjct: 140 KLGFAFSAMGKI------FKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVP 193

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +++T  +++ G C     +EA  L   MM  G QPN  T+  I++ +CK+G    A  LL
Sbjct: 194 DLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLL 253

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M    ++P   TY  ++D  C  GR++ A   F  ME+ G K  VF+Y+ LI  +C  
Sbjct: 254 RKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSF 313

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
              +    L  +M+++ I P+VV  + L   L +  ++  A  L++EM   G+  +T TY
Sbjct: 314 GRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITY 373

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            + I GLC +  + EA ++   +    C+ DI  YN LI+G CK+ +++  + LFR +  
Sbjct: 374 NSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSL 433

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             ++ + VTYS +I G C   ++  A+ +F +M    V P ++T+ +L+ G     E  +
Sbjct: 434 RGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEE 493

Query: 433 VIELLHKMKEINVMPDASIVSIVV 456
            + +L +M +  +  D  I +I++
Sbjct: 494 ALGILDQMHKCKMELDIGIYNIII 517



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 202/425 (47%), Gaps = 12/425 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A ALF  +      P V  +  L   L RT    + L L ++M      +      +  
Sbjct: 73  DAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAY------DLY 126

Query: 101 TYTTIIDGLCKE---GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           T   +I+  C+    GF   A   + ++     +PN VT+ +++ G C      EA  L 
Sbjct: 127 TLNIMINCFCRRRKLGFAFSAMGKIFKL---GYEPNTVTFNTLLNGLCLEGRVFEAVELV 183

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M+     P+++T N I++ LC   ++ EA  L+  M+ +G +P+ FTY  +L+  C +
Sbjct: 184 DCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKS 243

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G    A +L   ME    K  V +Y+I+I+  CK+  ++ ALS +SEM +KGIK +V  +
Sbjct: 244 GNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTY 303

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N+L        + +   +L  +M    +  +  T+   ID L K G + EA +L++ +  
Sbjct: 304 NSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMIT 363

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              E +   YNSLI GLC   RL+ A ++   +      P++ TY+I+I G C   Q+D 
Sbjct: 364 RGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDD 423

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
              LF  M    ++ + +T+  LI+GF +  +     ++  +M    V P     +I++D
Sbjct: 424 GMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLD 483

Query: 458 LLAKN 462
            L  N
Sbjct: 484 GLCDN 488



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 173/385 (44%), Gaps = 39/385 (10%)

Query: 111 KEGFVDKAKE----LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           + G VD  K+    L   M      P V+ +  +       K ++    L  +M  +G+ 
Sbjct: 63  RSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIA 122

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG-------- 218
            ++ T N++++  C+  K+  A   +  + + G  P+  T+NTLL+G CL G        
Sbjct: 123 YDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVEL 182

Query: 219 ---------------------------RVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
                                      RV+ A +L   M + GC+   F+Y  ++N  CK
Sbjct: 183 VDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCK 242

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           +     AL L  +M  + IKP VV +  +   L +  +++ A   F EM+  G+ A+ +T
Sbjct: 243 SGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFT 302

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y + I   C  G   +  +L   +   K   ++  +++LID L K G+L  A +L+  + 
Sbjct: 303 YNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMI 362

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + PN +TY+ +I GLCND ++D+A  +   M      P++ T+++LI GF +  +  
Sbjct: 363 TRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVD 422

Query: 432 KVIELLHKMKEINVMPDASIVSIVV 456
             + L  KM    ++ D    S ++
Sbjct: 423 DGMRLFRKMSLRGMIADTVTYSTLI 447



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 134/278 (48%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K D+A  L   M++    P    +N L      T + +    L   ME  G  + +++ +
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I+IN +C+ +++  A S   ++   G +P+ V  NTL  GL    +V  A +L D M  +
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
               D  T  T ++GLC    + EAV+L   +    C+ +   Y  +++ +CKSG    A
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L+L R +    + P+VVTY+I+I  LC DG++D A   F +ME   +  NV T++ LI  
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGS 309

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F          +LL  M    + P+    S ++D L K
Sbjct: 310 FCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVK 347



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 95/227 (41%), Gaps = 41/227 (18%)

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A++L+  ML     P V+  N LF  L    Q +    L  +M+  G+A D +T    
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 316 IDGLCKN---GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
           I+  C+    G+   A+      +I K  ++                             
Sbjct: 132 INCFCRRRKLGFAFSAMG-----KIFKLGYE----------------------------- 157

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               PN VT++ ++ GLC +G++ +A +L   M  +  VP++IT + ++ G    +  S+
Sbjct: 158 ----PNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSE 213

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
            ++L+ +M      P+      +++ + K+  + ++L      E ++
Sbjct: 214 AVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRK 260


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  321 bits (822), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 167/460 (36%), Positives = 263/460 (57%), Gaps = 16/460 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS       ++ ++   P+ VTFT+L+ GLC E RI+EA AL  ++   G +P   TY 
Sbjct: 164 RVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+V+G+C+   T+ ALNL  +M   +        PN V Y+ IID LCK+G    A+ L 
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M++K I P++ TY S+I GFC +  W++A++L  EM+++ + P+VVT+N +++   K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA+ L D M+  G+ P+  TYN+++DGFC   R++ A+++F  M + GC   VF++
Sbjct: 339 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 398

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GYC  K I+  + L  EM  +G+  + V +NTL  G   +  +  A  L  +M  
Sbjct: 399 TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 458

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYNSLI 351
           +GV  D  T  T +DGLC NG + +A+E+F  ++  K            E D+  YN LI
Sbjct: 459 SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILI 518

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GL   G+   A EL+  +P   +VP+ +TYS MI GLC   ++D+A  +F+ M   +  
Sbjct: 519 CGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS 578

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           PNV+TF+ LI G+ +       +EL  +M    ++ DA I
Sbjct: 579 PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII 618



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 180/382 (47%), Gaps = 52/382 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +L+   +PD VT+ +LI     E +  EAA L+ ++   G  P+  TY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 363

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C+      A ++F  MA         C P+  T+TT+IDG C    +D   EL
Sbjct: 364 NSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRIDDGMEL 417

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  + +  N VTY ++I GFC   D N A  L  +M+  GV P++VT N ++D LC 
Sbjct: 418 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 477

Query: 182 NGKMD----------------------------------------------EASRLLDLM 195
           NGK+                                               EA  L + M
Sbjct: 478 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 537

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ PD  TY++++DG C   R++ A ++FVSM S      V +++ LINGYCK   +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 597

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +  L L+ EM  +GI  D +I+ TL  G  ++  +  A  +F EM  +GV  DT T R  
Sbjct: 598 DDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 316 IDGLCKNGYIVEAVELFHTLRI 337
           + G      +  AV +   L++
Sbjct: 658 LTGFWSKEELERAVAMLEDLQM 679



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 220/449 (48%), Gaps = 12/449 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF+ +      P V  +  L+  + R     + ++L+++M        + C  +  
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIY 115

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++  +I   C    +  A     ++    + P+VVT+T+++ G C     +EA   F +M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +   +PNVVTF  +M+ LC+ G++ EA  LLD M++ G++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 221 NHAKELFVSMESMGCKH---TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             A  L   ME +   H    V  YS +I+  CK+     A +L++EM  KGI PD+  +
Sbjct: 236 VSALNLLRKMEEV--SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++ VG     +   A +L  EM    ++ D  TY   I+   K G   EA EL+  +  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                +   YNS+IDG CK  RL+ A ++F  +      P+V T++ +I G C   ++D 
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +L  +M    +V N +T++ LI GF  + + +  ++L  +M    V PD    + ++D
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 458 LLAKNEISLNSLPSFTVHEQQE-EVDESN 485
            L  N    ++L  F   ++ + ++D S+
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASH 502



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 1/322 (0%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF   K   +A  LF +M+     P+VV F  +M  + +  + D    L   M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D +++N L+  FC   ++  A   F  +  +G    V +++ L++G C    +  AL  +
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M     +P+VV   TL  GL    ++  A  L D M  +G+     TY T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 323 GYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           G  V A+ L   +  +     ++  Y+++ID LCK GR   A  LF  +    + P++ T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ MI G C+ G+   A  L  +M E  + P+V+T++ LI  F++  +  +  EL  +M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352

Query: 442 EINVMPDASIVSIVVDLLAKNE 463
              ++P+    + ++D   K +
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQD 374



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 120/237 (50%), Gaps = 3/237 (1%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G+ + K +E A+ L+S+ML     P VV    L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D +++   I   C    +  A+  F  +  L    D+  + +L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           + F  +      PNVVT++ ++ GLC +G++ +A  L   M E+ + P  IT+  ++ G 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
            +  +    + LL KM+E+ +++P+  I S ++D L K+    ++   FT  E QE+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT--EMQEK 284


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  321 bits (822), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 169/443 (38%), Positives = 264/443 (59%), Gaps = 6/443 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+++ GF VL +ILK  + PD VT  +LIKGLC + ++ +A     KL   G + +  +
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 166

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG+C+   T  A+ L +++       G + +PN V Y+TIID LCK   V +A  
Sbjct: 167 YGTLINGVCKIGDTRAAIKLLQKID------GRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I  +VVTY+++I GFC      EA  L  EM+ + + PNV T+N+++D LC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +L +M++  V+PD  TY+TL+DG+ L   V  A+ +F +M  MG    V 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILING+CKNK ++ AL+L+ EM  K + P +V +++L  GL +  ++   + L DEM
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G  A+  TY + IDGLCKNG++  A+ LF+ ++      +   +  L+DGLCK GRL
Sbjct: 401 HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 460

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A E+F+ L       NV TY++MI G C  G +++A  +   ME+N  +P+ +TF+++
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEII 520

Query: 421 IRGFIRINEPSKVIELLHKMKEI 443
           I    + +E    +    K+ EI
Sbjct: 521 IIALFKKDENGGNVGFDKKVWEI 543



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 143/444 (32%), Positives = 233/444 (52%), Gaps = 8/444 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T   LI   C   +I    ++  K+   G  PD  T  TL+ GLC       AL+ 
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            +++ A G        + N V+Y T+I+G+CK G    A +LL ++  +  KPNVV Y++
Sbjct: 152 HDKLLAQG-------FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYST 204

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C  +  +EA  LF EM  +G+  +VVT++ ++   C  GK+ EA  LL+ M+   
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+ +TYN L+D  C  G+V  AK +   M     K  V +YS L++GY    E++ A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +++ M   G+ PDV  +  L  G  +   V+ A  LF EM +  +     TY + IDGL
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK+G I    +L   +       ++  Y+SLIDGLCK+G L+ A+ LF  +    + PN 
Sbjct: 385 CKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNT 444

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            T++I++ GLC  G++  A+++F D+       NV T++++I G  +     + + +L K
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSK 504

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           M++   +PDA    I++  L K +
Sbjct: 505 MEDNGCIPDAVTFEIIIIALFKKD 528



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 207/421 (49%), Gaps = 6/421 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A + F ++      P +  +  +++   +  H   A++L   +     E   + +P+ +
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL-----ELKGI-QPDLI 95

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T   +I+  C  G +     +L ++  +   P+ VT  ++I+G C      +A     ++
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + QG Q N V++  +++ +CK G    A +LL  +     +P+   Y+T++D  C    V
Sbjct: 156 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLV 215

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A  LF  M   G    V +YS LI G+C   +++ A+ L +EM+ K I P+V  +N L
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +  +V+ A  +   M +  V  D  TY T +DG      + +A  +F+ + ++  
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  Y  LI+G CK+  ++ AL LF+ +    +VP +VTYS +I GLC  G++    D
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L  +M +     NVIT+  LI G  +     + I L +KMK+  + P+    +I++D L 
Sbjct: 396 LIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLC 455

Query: 461 K 461
           K
Sbjct: 456 K 456



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 174/331 (52%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P ++ +  ++  F   K ++ A  L   +  +G+QP+++T N++++  C  G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  +++ G  PD  T NTL+ G CL G+V  A      + + G +    SY  LING CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
             +   A+ L  ++  +  KP+VV+++T+   L +   V  A+ LF EM   G++AD  T
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I G C  G + EA+ L + + +     ++  YN L+D LCK G+++ A  +   + 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+V+TYS ++ G     ++ KA+ +F  M    V P+V T+ +LI GF +     
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + + L  +M + N++P     S ++D L K+
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 161/334 (48%)

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           ++ ++A   F  M+     P ++ FN I+D   K      A  L   +   G++PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L++ FC  G++     +   +   G      + + LI G C   +++ AL  + ++L+
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G + + V + TL  G+ +I     A KL  ++       +   Y T ID LCK   + E
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  LF  + +     D+  Y++LI G C  G+L+ A+ L   +    + PNV TY+I++ 
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC +G++ +A+ +   M +  V P+VIT+  L+ G+  + E  K   + + M  + V P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 448 DASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
           D    +I+++   KN++   +L  F    Q+  V
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            MG+++  F +L +ILK  + PD +TFT+LI GLC + ++ +A     KL   G + +  +
Sbjct: 974  MGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVS 1033

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y TL+NG+C+   T  A+ L  ++       G + +P+ V Y TIID LCK   V KA  
Sbjct: 1034 YGTLINGVCKIGDTRAAIKLLRKID------GRLTKPDVVMYNTIIDALCKHQLVSKAYG 1087

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L  +M  K I  +VVTY ++I GFC      EA  L  +M+ + + PNV T+N+++D LC
Sbjct: 1088 LFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALC 1147

Query: 181  KNGK--MDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            K GK  +DE+  +L  M  +G + +A T+  ++   
Sbjct: 1148 KEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 2/260 (0%)

Query: 148  KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
            K ++ A  L   +  +G+QP++ T N++++  C  G++     +L  +++ G  PD  T+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 208  NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             TL++G CL G+VN A      + + G +    SY  LING CK  +   A+ L  ++  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 268  KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            +  KPDVV++NT+   L +   V +A+ LF EM   G++AD  TY T I G C  G + E
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 328  AVELFHTLRILKCEFDIRAYNSLIDGLCKSGR--LEIALELFRSLPCGVLVPNVVTYSIM 385
            A+ L + + +     ++R YN L+D LCK G+  L+ +L +   +       N VT+ I+
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179

Query: 386  IGGLCNDGQMDKARDLFLDM 405
            I  L    + DK   L  +M
Sbjct: 1180 ISALFEKDENDKVEKLLHEM 1199



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 128/244 (52%), Gaps = 2/244 (0%)

Query: 199  GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            G++PD FT N L++ FC  G++     +   +   G      +++ LING C   ++  A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 259  LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            L  + ++L++G + + V + TL  G+ +I     A KL  ++       D   Y T ID 
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 319  LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            LCK+  + +A  LF  + +     D+  YN+LI G C  G+L+ A+ L   +    + PN
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 379  VVTYSIMIGGLCNDGQ--MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            V TY+I++  LC +G+  +D++  +   ME+N    N +TF+++I      +E  KV +L
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195

Query: 437  LHKM 440
            LH+M
Sbjct: 1196 LHEM 1199



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 10/253 (3%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD  T   LI   C   +I    ++  K+   G  PD  T+TTL+NGLC       AL+ 
Sbjct: 959  PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHF 1018

Query: 81   FEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
             ++ +A G        + N V+Y T+I+G+CK G    A +LL ++  +  KP+VV Y +
Sbjct: 1019 HDKLLAQG-------FQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNT 1071

Query: 140  VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            +I   C  +  ++A  LF EM  +G+  +VVT+N ++   C  GK+ EA  LL+ M+   
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT 1131

Query: 200  VRPDAFTYNTLLDGFCLTGR--VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            + P+  TYN L+D  C  G+  ++ +  +   ME  GCK    ++ I+I+   +  E + 
Sbjct: 1132 INPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDK 1191

Query: 258  ALSLYSEMLSKGI 270
               L  EM+++G+
Sbjct: 1192 VEKLLHEMIARGL 1204



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 136/266 (51%), Gaps = 8/266 (3%)

Query: 42   AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
            A +L  +L + G +PD+FT   L+N  C         ++  ++            P+T+T
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRG------YHPDTIT 998

Query: 102  YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
            +TT+I+GLC +G V+KA     ++  +  + N V+Y ++I G C   D   A +L  ++ 
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 162  DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
             +  +P+VV +N I+D LCK+  + +A  L   M   G+  D  TYNTL+ GFC+ G++ 
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 222  HAKELFVSMESMGCKHTVFSYSILINGYCKNKE--IEGALSLYSEMLSKGIKPDVVIHNT 279
             A  L   M        V +Y+IL++  CK  +  ++ +LS+ S+M   G K + V    
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 280  LFVGLFEIHQVERAFKLFDEMQRNGV 305
            +   LFE  + ++  KL  EM   G+
Sbjct: 1179 IISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 107/209 (51%)

Query: 253  KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            K    A+SL   +  KGI+PD+   N L      + Q+   F +  ++ + G   DT T+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 313  RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
             T I+GLC  G + +A+     L     + +  +Y +LI+G+CK G    A++L R +  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 373  GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             +  P+VV Y+ +I  LC    + KA  LF +M    +  +V+T++ LI GF  + +  +
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 433  VIELLHKMKEINVMPDASIVSIVVDLLAK 461
             I LL+KM    + P+    +I+VD L K
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCK 1148



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 65/137 (47%)

Query: 328  AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
            AV L H L +   + D+   N LI+  C  G++     +   +      P+ +T++ +I 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 388  GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            GLC  GQ++KA      +       N +++  LI G  +I +    I+LL K+      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 448  DASIVSIVVDLLAKNEI 464
            D  + + ++D L K+++
Sbjct: 1065 DVVMYNTIIDALCKHQL 1081


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  318 bits (815), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 168/440 (38%), Positives = 262/440 (59%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+++ GF VL +ILK  + P  VT  +LIKGLC + ++ +A     KL   G + +  +
Sbjct: 355 MGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 414

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG+C+   T  A+ L  ++       G + +PN   Y+TIID LCK   V +A  
Sbjct: 415 YATLINGVCKIGDTRGAIKLLRKID------GRLTKPNVEMYSTIIDALCKYQLVSEAYG 468

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I  +VVTY+++I GFC      EA  L  EM+ + + P+V T+ +++D L 
Sbjct: 469 LFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALG 528

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +L +M++  V+PD FTYNTL++G+ L   V  A+ +F +M  MG    V 
Sbjct: 529 KEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVH 588

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILING+CK+K ++ AL+L+ EM  K + PD V +++L  GL +  ++   + L DEM
Sbjct: 589 TYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEM 648

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G  AD  TY + IDGLCKNG++ +A+ LF+ ++      +   +  L+DGLCK GRL
Sbjct: 649 RDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 708

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A E+F+ L       +V  Y++MI G C  G +++A  +   MEEN  +PN +TFD++
Sbjct: 709 KDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDII 768

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I    + +E  K  +LL +M
Sbjct: 769 INALFKKDENDKAEKLLRQM 788



 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 162/486 (33%), Positives = 248/486 (51%), Gaps = 40/486 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL +ILK  + PD VT  +LIKGLC + ++ EA     KL   G + +  +Y TL+NG+C
Sbjct: 50  VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R   T  A+    ++       G + +PN   Y TIID LCK   V +A  L  +M  K 
Sbjct: 110 RIGDTRAAIKFLRKID------GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKG 163

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I  NVVTY+++I GFC      EA  L   M+ + + PNV T+N+++D LCK GK+ EA 
Sbjct: 164 ISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAK 223

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +L +M++  V+ +  TY+TL+DG+ L   V  A+ +F +M  MG    V SY+I+ING+
Sbjct: 224 SVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGF 283

Query: 250 CKNKEIEGALSLYSEML----------------------------------SKGIKPDVV 275
           CK K ++ AL+L+ EM+                                   KGI+PD+ 
Sbjct: 284 CKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLF 343

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             N L      + Q+   F +  ++ + G    T T  T I GLC  G + +A+     L
Sbjct: 344 TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKL 403

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                + +  +Y +LI+G+CK G    A++L R +   +  PNV  YS +I  LC    +
Sbjct: 404 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 463

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            +A  LF +M    +  +V+T+  LI GF  + +  + I LL++M    + PD    +I+
Sbjct: 464 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTIL 523

Query: 456 VDLLAK 461
           VD L K
Sbjct: 524 VDALGK 529



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/443 (31%), Positives = 229/443 (51%), Gaps = 6/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T   LI   C   +I    ++  K+   G  P   T  TL+ GLC       AL+ 
Sbjct: 340 PDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHF 399

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +++     +       N V+Y T+I+G+CK G    A +LL ++  +  KPNV  Y+++
Sbjct: 400 HDKLLAQGFQL------NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 453

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  +  +EA  LF EM  +G+  +VVT++ ++   C  GK+ EA  LL+ M+   +
Sbjct: 454 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI 513

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY  L+D     G+V  AK +   M     K  VF+Y+ L+NGY    E++ A  
Sbjct: 514 NPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQH 573

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +++ M   G+ PDV  +  L  G  +   V+ A  LF EM +  +  DT TY + +DGLC
Sbjct: 574 VFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC 633

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+G I    +L   +R      D+  YNSLIDGLCK+G L+ A+ LF  +    + PN  
Sbjct: 634 KSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTF 693

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++I++ GLC  G++  A+++F D+       +V  ++++I G  +     + + +L KM
Sbjct: 694 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKM 753

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
           +E   +P+A    I+++ L K +
Sbjct: 754 EENGCIPNAVTFDIIINALFKKD 776



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 235/495 (47%), Gaps = 42/495 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     VL  +LK+C   + +T+++L+ G      + +A  +F  + + G  PDV +Y
Sbjct: 217 GKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSY 276

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NG C+      ALNLF+EM            P  + +  I+D   K      A  L
Sbjct: 277 NIMINGFCKIKRVDKALNLFKEMILSR-------FPPIIQFNKILDSFAKMKHYSTAVSL 329

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +++ K I+P++ T   +I  FC+         +  +++ +G  P+ VT N ++  LC 
Sbjct: 330 SHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCL 389

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ +A    D ++  G + +  +Y TL++G C  G    A +L   ++    K  V  
Sbjct: 390 KGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEM 449

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+  CK + +  A  L+SEM  KGI  DVV ++TL  G   + +++ A  L +EM 
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509

Query: 302 RNGVAADTWTYRTFIDGLCK------------------------------NGYIV----- 326
              +  D  TY   +D L K                              NGY++     
Sbjct: 510 LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A  +F+ + ++    D+  Y  LI+G CKS  ++ AL LF+ +    +VP+ VTYS ++
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC  G++    DL  +M +     +VIT++ LI G  +     K I L +KMK+  + 
Sbjct: 630 DGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIR 689

Query: 447 PDASIVSIVVDLLAK 461
           P+    +I++D L K
Sbjct: 690 PNTFTFTILLDGLCK 704



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 237/520 (45%), Gaps = 79/520 (15%)

Query: 12  GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
           GR+ K    P+   + ++I  LC    + EA  LF+++ V G   +V TY+TL+ G C  
Sbjct: 126 GRLAK----PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIV 181

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                AL L   M            PN  TY  ++D LCKEG V +AK +L  M    +K
Sbjct: 182 GKLKEALGLLNVMVLKT------INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVK 235

Query: 132 PNVVTYTSV-----------------------------------IRGFCYAKDWNEAKRL 156
            NV+TY+++                                   I GFC  K  ++A  L
Sbjct: 236 SNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNL 295

Query: 157 FIEMMD----------------------------------QGVQPNVVTFNVIMDELCKN 182
           F EM+                                   +G+QP++ T N++++  C  
Sbjct: 296 FKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHM 355

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++     +L  +++ G  P   T NTL+ G CL G+V  A      + + G +    SY
Sbjct: 356 GQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 415

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LING CK  +  GA+ L  ++  +  KP+V +++T+   L +   V  A+ LF EM  
Sbjct: 416 ATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTV 475

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G++AD  TY T I G C  G + EA+ L + + +     D+R Y  L+D L K G+++ 
Sbjct: 476 KGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKE 535

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  +   +    + P+V TY+ ++ G     ++ KA+ +F  M    V P+V T+ +LI 
Sbjct: 536 AKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 595

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           GF +     + + L  +M + N++PD    S +VD L K+
Sbjct: 596 GFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKS 635



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/552 (25%), Positives = 249/552 (45%), Gaps = 75/552 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKG----------------------------- 32
           G+V        ++L   F  + V++ +LI G                             
Sbjct: 77  GQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMY 136

Query: 33  ------LCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
                 LC    + EA  LF+++ V G   +V TY+TL+ G C       AL L   M  
Sbjct: 137 NTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVL 196

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                     PN  TY  ++D LCKEG V +AK +L  M    +K NV+TY++++ G+  
Sbjct: 197 KT------INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFL 250

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI---------- 196
             +  +A+ +F  M   GV P+V ++N++++  CK  ++D+A  L   MI          
Sbjct: 251 VYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF 310

Query: 197 ----------QH--------------GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
                     +H              G++PD FT N L++ FC  G++     +   +  
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G   +  + + LI G C   +++ AL  + ++L++G + + V + TL  G+ +I     
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A KL  ++       +   Y T ID LCK   + EA  LF  + +     D+  Y++LI 
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G C  G+L+ A+ L   +    + P+V TY+I++  L  +G++ +A+ +   M +  V P
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           +V T++ L+ G++ + E  K   + + M  + V PD    +I+++   K+++   +L  F
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610

Query: 473 TVHEQQEEVDES 484
               Q+  V ++
Sbjct: 611 KEMHQKNMVPDT 622



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 168/305 (55%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +L  ++     PD  T+T L+  L  E ++ EA ++   +     +PDVFT
Sbjct: 495 VGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFT 554

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG         A ++F  M+      GV   P+  TYT +I+G CK   VD+A  
Sbjct: 555 YNTLMNGYLLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKSKMVDEALN 608

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  KN+ P+ VTY+S++ G C +   +    L  EM D+G   +V+T+N ++D LC
Sbjct: 609 LFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLC 668

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG +D+A  L + M   G+RP+ FT+  LLDG C  GR+  A+E+F  + + G    V+
Sbjct: 669 KNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVY 728

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+++I G+CK   +E AL++ S+M   G  P+ V  + +   LF+  + ++A KL  +M
Sbjct: 729 IYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788

Query: 301 QRNGV 305
              G+
Sbjct: 789 IARGL 793



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 35/235 (14%)

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           +LS+ +++L +G  PD V  NTL  GL    QV+ A    D++   G   +  +Y T I+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS-------------------- 357
           G+C+ G    A++    +     + ++  YN++ID LCK                     
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 358 ---------------GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
                          G+L+ AL L   +    + PNV TY+I++  LC +G++ +A+ + 
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             M +  V  NVIT+  L+ G+  + E  K   + + M  + V PD    +I+++
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMIN 281



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 2/178 (1%)

Query: 286 EIHQVERAFKL--FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            I  V+ A  L    ++ + G   DT T  T I GLC  G + EA+     L     + +
Sbjct: 38  SIQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLN 97

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
             +Y +LI+G+C+ G    A++  R +   +  PNV  Y+ +I  LC    + +A  LF 
Sbjct: 98  QVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFS 157

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +M    +  NV+T+  LI GF  + +  + + LL+ M    + P+    +I+VD L K
Sbjct: 158 EMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCK 215


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  318 bits (815), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 164/440 (37%), Positives = 262/440 (59%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F V  +ILK  + PD +TFT+L KGLC + +I +A     K+   G   D  +
Sbjct: 133 LGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQIS 192

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++GLC+   T  AL+L + + +GN     + +PN V Y TIID +CK   V++A +
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRV-DGN-----LVQPNVVMYNTIIDSMCKVKLVNEAFD 246

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+VVTY+++I GFC      +A  LF +M+ + ++P+V TFN++++  C
Sbjct: 247 LFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFC 306

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+GKM E   + D+M++ G++P+  TYN+L+DG+CL   VN AK +F +M   G    + 
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYSI+ING+CK K+ + A++L+ EM  K I PDVV +++L  GL +  ++  A +L D+M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  +  TY + +D LCK   + +A+ L    +    + DI  Y+ LI GLC+SG+L
Sbjct: 427 HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKL 486

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A ++F  L       +V  Y+IMI G C +G  ++A  L   ME+N  +P+  T++++
Sbjct: 487 EDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I    + +E     +LL +M
Sbjct: 547 ILSLFKKDENDMAEKLLREM 566



 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/444 (32%), Positives = 235/444 (52%), Gaps = 7/444 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V    LI   C    I  A ++F K+   G  PD  T+TTL  GLC       A   
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLF 177

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +++      F      + ++Y T+I GLCK G    A +LL ++    ++PNVV Y ++
Sbjct: 178 HDKVVALGFHF------DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  K  NEA  LF EM+ +G+ P+VVT++ ++   C  GK+ +A  L + MI   +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD +T+N L++ FC  G++   K +F  M   G K    +Y+ L++GYC  KE+  A S
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +++ M   G+ PD+  ++ +  G  +I + + A  LF EM R  +  D  TY + IDGL 
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+G I  A++L   +       +I  YNS++D LCK+ +++ A+ L          P++ 
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIS 471

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TYSI+I GLC  G+++ AR +F D+       +V  + ++I+GF      ++ + LL KM
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKM 531

Query: 441 KEINVMPDASIVSIVV-DLLAKNE 463
           ++   +PDA    I++  L  K+E
Sbjct: 532 EDNGCIPDAKTYEIIILSLFKKDE 555



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 225/439 (51%), Gaps = 6/439 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           ++++S      + + + +A +LF +L      P  F +  ++  L ++ H    L L ++
Sbjct: 51  ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQK 110

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M     EF  + +PN V    +I+  C+ G +  A  +  ++      P+ +T+T++ +G
Sbjct: 111 M-----EFRGI-KPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKG 164

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C      +A     +++  G   + +++  ++  LCK G+   A  LL  +  + V+P+
Sbjct: 165 LCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPN 224

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
              YNT++D  C    VN A +LF  M S G    V +YS LI+G+C   +++ A+ L++
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFN 284

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           +M+ + IKPDV   N L     +  +++    +FD M + G+  +  TY + +DG C   
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + +A  +F+T+       DI++Y+ +I+G CK  + + A+ LF+ +    ++P+VVTYS
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I GL   G++  A  L   M +  V PN+ T++ ++    + ++  K I LL K K+ 
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464

Query: 444 NVMPDASIVSIVVDLLAKN 462
              PD S  SI++  L ++
Sbjct: 465 GFQPDISTYSILIKGLCQS 483



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 189/365 (51%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N ++Y++          VD A  L  ++  +N  P    +  ++     +K ++    L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M  +G++PN+V  N++++  C+ G +  A  +   +++ G  PD  T+ TL  G CL 
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G++  A      + ++G      SY  LI+G CK  E   AL L   +    ++P+VV++
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           NT+   + ++  V  AF LF EM   G++ D  TY   I G C  G + +A++LF+ + +
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              + D+  +N L++  CK G+++    +F  +    + PN VTY+ ++ G C   +++K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A+ +F  M +  V P++ ++ ++I GF +I +  + + L  +M   N++PD    S ++D
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 458 LLAKN 462
            L+K+
Sbjct: 409 GLSKS 413



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 164/310 (52%), Gaps = 6/310 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  +++     PD  TF  L+   C + ++ E   +F  +   G +P+  T
Sbjct: 273 LGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G C       A ++F  MA G    GV   P+  +Y+ +I+G CK    D+A  
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQG----GV--NPDIQSYSIMINGFCKIKKFDEAMN 386

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  KNI P+VVTY+S+I G   +   + A +L  +M D+GV PN+ T+N I+D LC
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALC 446

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++D+A  LL      G +PD  TY+ L+ G C +G++  A+++F  +   G    V+
Sbjct: 447 KTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVY 506

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+I+I G+C       AL+L S+M   G  PD   +  + + LF+  + + A KL  EM
Sbjct: 507 AYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566

Query: 301 QRNGVAADTW 310
              G+  + +
Sbjct: 567 IARGLPLNFY 576



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 160/331 (48%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           K N ++Y+S    F    D ++A  LF  ++ +   P    FN I+  L K+        
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M   G++P+    N L++ FC  G +  A  +F  +  MG      +++ L  G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
              +I+ A   + ++++ G   D + + TL  GL ++ +   A  L   +  N V  +  
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            Y T ID +CK   + EA +LF  +       D+  Y++LI G C  G+L+ A++LF  +
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               + P+V T++I++   C DG+M + + +F  M +  + PN +T++ L+ G+  + E 
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +K   + + M +  V PD    SI+++   K
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 171/497 (34%), Positives = 271/497 (54%), Gaps = 41/497 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++S+ F  +G+I+K  + PD V F +L+ GLC E R+ EA  L  ++   G +P + T  
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197

Query: 63  TLVNGLC-----------------------------------RTSHTIVALNLFEEMANG 87
           TLVNGLC                                   ++  T +A+ L  +M   
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
           N +       + V Y+ IIDGLCK+G +D A  L  +M+ K  K +++TY ++I GFC A
Sbjct: 258 NIKL------DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
             W++  +L  +M+ + + PNVVTF+V++D   K GK+ EA +LL  M+Q G+ P+  TY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N+L+DGFC   R+  A ++   M S GC   + +++ILINGYCK   I+  L L+ EM  
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G+  + V +NTL  G  +  ++E A KLF EM    V  D  +Y+  +DGLC NG + +
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A+E+F  +   K E DI  Y  +I G+C + +++ A +LF SLP   +  +   Y+IMI 
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC    + KA  LF  M E    P+ +T+++LIR  +  ++ +   EL+ +MK      
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611

Query: 448 DASIVSIVVDLLAKNEI 464
           D S V +V+++L+  E+
Sbjct: 612 DVSTVKMVINMLSSGEL 628



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 226/420 (53%), Gaps = 6/420 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+VS   V++ R++++ F P+ VT+  ++  +C   +   A  L  K+     + D   Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + +++GLC+      A NLF EM           + + +TY T+I G C  G  D   +L
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKG------FKADIITYNTLIGGFCNAGRWDDGAKL 320

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  + I PNVVT++ +I  F       EA +L  EMM +G+ PN +T+N ++D  CK
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA +++DLMI  G  PD  T+N L++G+C   R++   ELF  M   G      +
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+ G+C++ ++E A  L+ EM+S+ ++PD+V +  L  GL +  ++E+A ++F +++
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++ +  D   Y   I G+C    + +A +LF +L +   + D RAYN +I  LC+   L 
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LFR +      P+ +TY+I+I     D     A +L  +M+ +    +V T  M+I
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 229/436 (52%), Gaps = 6/436 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  + F  L   +    +     AL  ++   G    ++T + ++N  CR      A + 
Sbjct: 86  PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             ++     + G   EP+TV + T+++GLC E  V +A EL+ +M +   KP ++T  ++
Sbjct: 146 MGKIM----KLGY--EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTL 199

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C     ++A  L   M++ G QPN VT+  +++ +CK+G+   A  LL  M +  +
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + DA  Y+ ++DG C  G +++A  LF  ME  G K  + +Y+ LI G+C     +    
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +M+ + I P+VV  + L     +  ++  A +L  EM + G+A +T TY + IDG C
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + EA+++   +    C+ DI  +N LI+G CK+ R++  LELFR +    ++ N V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ G C  G+++ A+ LF +M    V P+++++ +L+ G     E  K +E+  K+
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499

Query: 441 KEINVMPDASIVSIVV 456
           ++  +  D  I  I++
Sbjct: 500 EKSKMELDIGIYMIII 515



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 173/343 (50%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
            D A +L   M      P V+ +  +       K +     L  +M  +G+  ++ T ++
Sbjct: 69  ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++  C+  K+  A   +  +++ G  PD   +NTLL+G CL  RV+ A EL   M  MG
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            K T+ + + L+NG C N ++  A+ L   M+  G +P+ V +  +   + +  Q   A 
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +L  +M+   +  D   Y   IDGLCK+G +  A  LF+ + I   + DI  YN+LI G 
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C +GR +   +L R +    + PNVVT+S++I     +G++ +A  L  +M +  + PN 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           IT++ LI GF + N   + I+++  M      PD    +I+++
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 172/335 (51%), Gaps = 6/335 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +L  ++K   +P+ VTF+ LI     E ++ EA  L  ++   G  P+  TY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++G C+ +    A+ + + M +        C+P+ +T+  +I+G CK   +D   EL
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKG------CDPDIMTFNILINGYCKANRIDDGLEL 425

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  N VTY ++++GFC +     AK+LF EM+ + V+P++V++ +++D LC 
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++++A  +   + +  +  D   Y  ++ G C   +V+ A +LF S+   G K    +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+I+  C+   +  A  L+ +M  +G  PD + +N L            A +L +EM+
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            +G  AD  T +  I+ L         +++  T R
Sbjct: 606 SSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 150/311 (48%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           ++A  LF +M+     P V+ FN +   + K  + +    L   M   G+    +T + +
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ FC   ++++A      +  +G +     ++ L+NG C    +  AL L   M+  G 
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           KP ++  NTL  GL    +V  A  L D M   G   +  TY   ++ +CK+G    A+E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +     + D   Y+ +IDGLCK G L+ A  LF  +       +++TY+ +IGG C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
           N G+ D    L  DM +  + PNV+TF +LI  F++  +  +  +LL +M +  + P+  
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 451 IVSIVVDLLAK 461
             + ++D   K
Sbjct: 370 TYNSLIDGFCK 380



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 139/278 (50%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K D+A  L   MIQ    P    +N L      T +      L   MES G  H++++ S
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I+IN +C+ +++  A S   +++  G +PD VI NTL  GL    +V  A +L D M   
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G      T  T ++GLC NG + +AV L   +     + +   Y  +++ +CKSG+  +A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           +EL R +    +  + V YSI+I GLC DG +D A +LF +ME      ++IT++ LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F          +LL  M +  + P+    S+++D   K
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 162/458 (35%), Positives = 258/458 (56%), Gaps = 16/458 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS    +  ++ ++   P+ VTFT+L+ GLC E RI+EA AL  ++   G +P   TY 
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+V+G+C+   T+ ALNL  +M   +        PN V Y+ IID LCK+G    A+ L 
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M++K I P++ TY S+I GFC +  W++A++L  EM+++ + P+VVT+N +++   K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA  L D M+  G+ P+  TY++++DGFC   R++ A+ +F  M + GC   + ++
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GYC  K I+  + L  EM   G+  D   +NTL  G + +  +  A  L  EM  
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYNSLI 351
           +G+  D  T  T +DGLC NG + +A+E+F  ++  K            E D++ YN LI
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GL   G+   A EL+  +P   +VP+ +TYS MI GLC   ++D+A  +F  M   +  
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 578

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           PNV+TF  LI G+ +       +EL  +M    ++ +A
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 9/439 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L+S   P  V F  L+  +    R     +L+ K+       D++++T L+   C  S 
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 129

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL+ F ++     + G+   P+ VT+ T++ GLC E  V +A  L  QM +   +PN
Sbjct: 130 LPFALSTFGKIT----KLGL--HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+T+++ G C      EA  L   MM+ G+QP  +T+  I+D +CK G    A  LL 
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 194 LM--IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            M  + H + P+   Y+ ++D  C  GR + A+ LF  M+  G    +F+Y+ +I G+C 
Sbjct: 244 KMEEVSH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           +     A  L  EML + I PDVV +N L     +  +   A +L+DEM   G+  +T T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y + IDG CK   +  A  +F+ +    C  ++  +N+LIDG C + R++  +EL   + 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              LV +  TY+ +I G    G ++ A DL  +M  + + P+++T D L+ G     +  
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 432 KVIELLHKMKEINVMPDAS 450
             +E+   M++     DAS
Sbjct: 483 DALEMFKVMQKSKKDLDAS 501



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 223/449 (49%), Gaps = 12/449 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF+ +      P V  +  L+  + R     + ++L+++M        + C+    
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRCD--IY 115

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++T +I   C    +  A     ++    + P+VVT+ +++ G C     +EA  LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +   +PNVVTF  +M+ LC+ G++ EA  LLD M++ G++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 221 NHAKELFVSMESMGCKH---TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             A  L   ME +   H    V  YS +I+  CK+     A +L++EM  KGI PD+  +
Sbjct: 236 VSALNLLRKMEEV--SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++ VG     +   A +L  EM    ++ D  TY   I+   K G   EA EL+  +  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                +   Y+S+IDG CK  RL+ A  +F  +      PN++T++ +I G C   ++D 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +L  +M E  +V +  T++ LI GF  + + +  ++LL +M    + PD      ++D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 458 LLAKNEISLNSLPSFTVHEQ-QEEVDESN 485
            L  N    ++L  F V ++ ++++D S+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASH 502



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 178/382 (46%), Gaps = 52/382 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +L+   +PD VT+ +LI     E +  EA  L+ ++   G  P+  TY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +++++G C+ +    A ++F  MA         C PN +T+ T+IDG C    +D   EL
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  +  +  TY ++I GF    D N A  L  EM+  G+ P++VT + ++D LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 182 NGKMD----------------------------------------------EASRLLDLM 195
           NGK+                                               EA  L + M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ PD  TY++++DG C   R++ A ++F SM S      V +++ LINGYCK   +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +  L L+ EM  +GI  + + + TL  G  ++  +  A  +F EM  +GV  DT T R  
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 316 IDGLCKNGYIVEAVELFHTLRI 337
           + GL     +  AV +   L++
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQM 679



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 1/321 (0%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF   K   +A  LF +M+     P+VV F  +M  + +  + D    L   M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D +++  L+  FC   ++  A   F  +  +G    V +++ L++G C    +  AL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M     +P+VV   TL  GL    ++  A  L D M  +G+     TY T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 323 GYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           G  V A+ L   +  +     ++  Y+++ID LCK GR   A  LF  +    + P++ T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ MI G C+ G+   A  L  +M E  + P+V+T++ LI  F++  +  +  EL  +M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 442 EINVMPDASIVSIVVDLLAKN 462
              ++P+    S ++D   K 
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQ 373



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 121/237 (51%), Gaps = 3/237 (1%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G+ + K +E A+ L+S+ML     P VV    L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D +++   I   C    +  A+  F  +  L    D+  +N+L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +      PNVVT++ ++ GLC +G++ +A  L   M E+ + P  IT+  ++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
            +  +    + LL KM+E+ +++P+  I S ++D L K+    ++   FT  E QE+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT--EMQEK 284


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 162/458 (35%), Positives = 258/458 (56%), Gaps = 16/458 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS    +  ++ ++   P+ VTFT+L+ GLC E RI+EA AL  ++   G +P   TY 
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+V+G+C+   T+ ALNL  +M   +        PN V Y+ IID LCK+G    A+ L 
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M++K I P++ TY S+I GFC +  W++A++L  EM+++ + P+VVT+N +++   K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA  L D M+  G+ P+  TY++++DGFC   R++ A+ +F  M + GC   + ++
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GYC  K I+  + L  EM   G+  D   +NTL  G + +  +  A  L  EM  
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYNSLI 351
           +G+  D  T  T +DGLC NG + +A+E+F  ++  K            E D++ YN LI
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GL   G+   A EL+  +P   +VP+ +TYS MI GLC   ++D+A  +F  M   +  
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 578

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           PNV+TF  LI G+ +       +EL  +M    ++ +A
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 9/439 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L+S   P  V F  L+  +    R     +L+ K+       D++++  L+   C  S 
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSK 129

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL+ F ++     + G+   P+ VT+TT++ GLC E  V +A  L  QM +   +PN
Sbjct: 130 LPFALSTFGKIT----KLGL--HPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+T+++ G C      EA  L   MM+ G+QP  +T+  I+D +CK G    A  LL 
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 194 LM--IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            M  + H + P+   Y+ ++D  C  GR + A+ LF  M+  G    +F+Y+ +I G+C 
Sbjct: 244 KMEEVSH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           +     A  L  EML + I PDVV +N L     +  +   A +L+DEM   G+  +T T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y + IDG CK   +  A  +F+ +    C  ++  +N+LIDG C + R++  +EL   + 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              LV +  TY+ +I G    G ++ A DL  +M  + + P+++T D L+ G     +  
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 432 KVIELLHKMKEINVMPDAS 450
             +E+   M++     DAS
Sbjct: 483 DALEMFKVMQKSKKDLDAS 501



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 223/449 (49%), Gaps = 12/449 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF+ +      P V  +  L+  + R     + ++L+++M        + C+    
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRCD--IY 115

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++  +I   C    +  A     ++    + P+VVT+T+++ G C     +EA  LF +M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQM 175

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +   +PNVVTF  +M+ LC+ G++ EA  LLD M++ G++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 221 NHAKELFVSMESMGCKH---TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             A  L   ME +   H    V  YS +I+  CK+     A +L++EM  KGI PD+  +
Sbjct: 236 VSALNLLRKMEEV--SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++ VG     +   A +L  EM    ++ D  TY   I+   K G   EA EL+  +  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                +   Y+S+IDG CK  RL+ A  +F  +      PN++T++ +I G C   ++D 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +L  +M E  +V +  T++ LI GF  + + +  ++LL +M    + PD      ++D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 458 LLAKNEISLNSLPSFTVHEQ-QEEVDESN 485
            L  N    ++L  F V ++ ++++D S+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASH 502



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 178/382 (46%), Gaps = 52/382 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +L+   +PD VT+ +LI     E +  EA  L+ ++   G  P+  TY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +++++G C+ +    A ++F  MA         C PN +T+ T+IDG C    +D   EL
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  +  +  TY ++I GF    D N A  L  EM+  G+ P++VT + ++D LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 182 NGKMD----------------------------------------------EASRLLDLM 195
           NGK+                                               EA  L + M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ PD  TY++++DG C   R++ A ++F SM S      V +++ LINGYCK   +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +  L L+ EM  +GI  + + + TL  G  ++  +  A  +F EM  +GV  DT T R  
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 316 IDGLCKNGYIVEAVELFHTLRI 337
           + GL     +  AV +   L++
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQM 679



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 157/321 (48%), Gaps = 1/321 (0%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF   K   +A  LF +M+     P+VV F  +M  + +  + D    L   M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D +++N L+  FC   ++  A   F  +  +G    V +++ L++G C    +  AL+L+
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M     +P+VV   TL  GL    ++  A  L D M  +G+     TY T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 323 GYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           G  V A+ L   +  +     ++  Y+++ID LCK GR   A  LF  +    + P++ T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ MI G C+ G+   A  L  +M E  + P+V+T++ LI  F++  +  +  EL  +M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 442 EINVMPDASIVSIVVDLLAKN 462
              ++P+    S ++D   K 
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQ 373



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 120/237 (50%), Gaps = 3/237 (1%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G+ + K +E A+ L+S+ML     P VV    L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D +++   I   C    +  A+  F  +  L    D+  + +L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +      PNVVT++ ++ GLC +G++ +A  L   M E+ + P  IT+  ++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
            +  +    + LL KM+E+ +++P+  I S ++D L K+    ++   FT  E QE+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT--EMQEK 284


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  315 bits (808), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 162/458 (35%), Positives = 258/458 (56%), Gaps = 16/458 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS    +  ++ ++   P+ VTFT+L+ GLC E RI+EA AL  ++   G +P   TY 
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+V+G+C+   T+ ALNL  +M   +        PN V Y+ IID LCK+G    A+ L 
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M++K I P++ TY S+I GFC +  W++A++L  EM+++ + P+VVT+N +++   K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA  L D M+  G+ P+  TY++++DGFC   R++ A+ +F  M + GC   + ++
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GYC  K I+  + L  EM   G+  D   +NTL  G + +  +  A  L  EM  
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYNSLI 351
           +G+  D  T  T +DGLC NG + +A+E+F  ++  K            E D++ YN LI
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GL   G+   A EL+  +P   +VP+ +TYS MI GLC   ++D+A  +F  M   +  
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 578

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           PNV+TF  LI G+ +       +EL  +M    ++ +A
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 9/439 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L+S   P  V F  L+  +    R     +L+ K+       D++++T L+   C  S 
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 129

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL+ F ++     + G+   P+ VT+ T++ GLC E  V +A  L  QM +   +PN
Sbjct: 130 LPFALSTFGKLT----KLGL--HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+T+++ G C      EA  L   MM+ G+QP  +T+  I+D +CK G    A  LL 
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 194 LM--IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            M  + H + P+   Y+ ++D  C  GR + A+ LF  M+  G    +F+Y+ +I G+C 
Sbjct: 244 KMEEVSH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           +     A  L  EML + I PDVV +N L     +  +   A +L+DEM   G+  +T T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y + IDG CK   +  A  +F+ +    C  ++  +N+LIDG C + R++  +EL   + 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              LV +  TY+ +I G    G ++ A DL  +M  + + P+++T D L+ G     +  
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 432 KVIELLHKMKEINVMPDAS 450
             +E+   M++     DAS
Sbjct: 483 DALEMFKVMQKSKKDLDAS 501



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 223/449 (49%), Gaps = 12/449 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF+ +      P V  +  L+  + R     + ++L+++M        + C+    
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRCD--IY 115

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++T +I   C    +  A     ++    + P+VVT+ +++ G C     +EA  LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +   +PNVVTF  +M+ LC+ G++ EA  LLD M++ G++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 221 NHAKELFVSMESMGCKH---TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             A  L   ME +   H    V  YS +I+  CK+     A +L++EM  KGI PD+  +
Sbjct: 236 VSALNLLRKMEEV--SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++ VG     +   A +L  EM    ++ D  TY   I+   K G   EA EL+  +  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                +   Y+S+IDG CK  RL+ A  +F  +      PN++T++ +I G C   ++D 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +L  +M E  +V +  T++ LI GF  + + +  ++LL +M    + PD      ++D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 458 LLAKNEISLNSLPSFTVHEQ-QEEVDESN 485
            L  N    ++L  F V ++ ++++D S+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASH 502



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 178/382 (46%), Gaps = 52/382 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +L+   +PD VT+ +LI     E +  EA  L+ ++   G  P+  TY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +++++G C+ +    A ++F  MA         C PN +T+ T+IDG C    +D   EL
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  +  +  TY ++I GF    D N A  L  EM+  G+ P++VT + ++D LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 182 NGKMD----------------------------------------------EASRLLDLM 195
           NGK+                                               EA  L + M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ PD  TY++++DG C   R++ A ++F SM S      V +++ LINGYCK   +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +  L L+ EM  +GI  + + + TL  G  ++  +  A  +F EM  +GV  DT T R  
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 316 IDGLCKNGYIVEAVELFHTLRI 337
           + GL     +  AV +   L++
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQM 679



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 1/321 (0%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF   K   +A  LF +M+     P+VV F  +M  + +  + D    L   M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D +++  L+  FC   ++  A   F  +  +G    V +++ L++G C    +  AL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M     +P+VV   TL  GL    ++  A  L D M  +G+     TY T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 323 GYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           G  V A+ L   +  +     ++  Y+++ID LCK GR   A  LF  +    + P++ T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ MI G C+ G+   A  L  +M E  + P+V+T++ LI  F++  +  +  EL  +M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 442 EINVMPDASIVSIVVDLLAKN 462
              ++P+    S ++D   K 
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQ 373



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 121/237 (51%), Gaps = 3/237 (1%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G+ + K +E A+ L+S+ML     P VV    L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D +++   I   C    +  A+  F  L  L    D+  +N+L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +      PNVVT++ ++ GLC +G++ +A  L   M E+ + P  IT+  ++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
            +  +    + LL KM+E+ +++P+  I S ++D L K+    ++   FT  E QE+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT--EMQEK 284


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  315 bits (807), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 162/418 (38%), Positives = 251/418 (60%), Gaps = 6/418 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + P+ +TFT+LIKGLC + +I +A      +   G + D   Y TL++GLC+   T  AL
Sbjct: 123 YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAAL 182

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L   + +GN     + +PN V Y+TIIDG+CK+  V+ A +L  +M  K I PNVVTY+
Sbjct: 183 DLLRRV-DGN-----LVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 236

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I GF       +A  LF +M+ + ++P+V TFN+++D  CK+GKM E   +  +M++ 
Sbjct: 237 ALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 296

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G++P+  TY +L+DG+CL   VN AK +  +M   G    + SY+ILI+G+CK K+++ A
Sbjct: 297 GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEA 356

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           ++L+ EM  K I PDVV +N+L  GL ++ ++  A KL DEM   GV  D  TY + +D 
Sbjct: 357 MNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDA 416

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCKN  + +A+ L   L+      ++  Y  LIDGLCK GRLE A  +F  L        
Sbjct: 417 LCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNIT 476

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           V TY++MI G CN G  D+A  L   M++N+ +P+ +T++++IR     +E  K  +L
Sbjct: 477 VNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/477 (32%), Positives = 247/477 (51%), Gaps = 23/477 (4%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-------------- 49
           V   F +  R+L+   TP A+ F  ++  L          +L  ++              
Sbjct: 57  VVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQH 116

Query: 50  --RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIID 107
             ++ G  P+  T+TTL+ GLC       AL LF +     G      + + V Y T+I 
Sbjct: 117 PHQLMGYHPNTITFTTLIKGLCLKGQIHQAL-LFHDNVVAMG-----FQLDQVGYGTLIH 170

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
           GLCK G    A +LL ++    ++PNVV Y+++I G C  K  N+A  L+ EM+ +G+ P
Sbjct: 171 GLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 230

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           NVVT++ ++      G++ +A  L + MI   ++PD +T+N L+DGFC  G++   K +F
Sbjct: 231 NVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF 290

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G K  V +Y  L++GYC  KE+  A S+   M  +G+ PD+  +N L  G  +I
Sbjct: 291 AMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKI 350

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            +V+ A  LF EM    +  D  TY + IDGLCK G I  A++L   +       DI  Y
Sbjct: 351 KKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITY 410

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           +S++D LCK+ +++ A+ L   L    + PN+ TY+I+I GLC  G+++ A ++F D+  
Sbjct: 411 SSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLV 470

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV-DLLAKNE 463
                 V T+ ++I GF       + + LL KMK+ + +PDA    I++  L  K+E
Sbjct: 471 KGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDE 527



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 199/375 (53%), Gaps = 6/375 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G       +L R+  +   P+ V ++++I G+C +  + +A  L++++   G  P+V T
Sbjct: 175 VGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 234

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L++G         A++LF +M   N       +P+  T+  ++DG CK+G + + K 
Sbjct: 235 YSALISGFFTVGQLKDAIDLFNKMILEN------IKPDVYTFNILVDGFCKDGKMKEGKT 288

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M  + IKPNVVTY S++ G+C  K+ N+AK +   M  +GV P++ ++N+++D  C
Sbjct: 289 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC 348

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  K+DEA  L   M    + PD  TYN+L+DG C  G++++A +L   M   G    + 
Sbjct: 349 KIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDII 408

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS +++  CKN +++ A++L +++  +GI+P++  +  L  GL +  ++E A  +F+++
Sbjct: 409 TYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDL 468

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G      TY   I G C  G   EA+ L   ++   C  D   Y  +I  L      
Sbjct: 469 LVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDEN 528

Query: 361 EIALELFRSLPCGVL 375
           + A +L   +  G+L
Sbjct: 529 DKAEKLREMITRGLL 543



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 181/384 (47%), Gaps = 51/384 (13%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           K N + Y+S+   F    D  +A  LF  ++ Q   P  + FN I+  L K+        
Sbjct: 38  KINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLS 97

Query: 191 LLDLM-----------IQH-----GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           L   M            QH     G  P+  T+ TL+ G CL G+++ A     ++ +MG
Sbjct: 98  LSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMG 157

Query: 235 ---------------CK--------------------HTVFSYSILINGYCKNKEIEGAL 259
                          CK                      V  YS +I+G CK+K +  A 
Sbjct: 158 FQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAF 217

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            LYSEM+SKGI P+VV ++ L  G F + Q++ A  LF++M    +  D +T+   +DG 
Sbjct: 218 DLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGF 277

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK+G + E   +F  +     + ++  Y SL+DG C    +  A  +  ++    + P++
Sbjct: 278 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDI 337

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            +Y+I+I G C   ++D+A +LF +M    ++P+V+T++ LI G  ++ + S  ++L+ +
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE 397

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           M +  V PD    S ++D L KN 
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNH 421


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  315 bits (807), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 162/458 (35%), Positives = 257/458 (56%), Gaps = 16/458 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS       ++ ++   P+ VTFT+L+ GLC E RI+EA AL  ++   G +P   TY 
Sbjct: 164 RVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+V+G+C+   T+ ALNL  +M   +        PN V Y+ IID LCK+G    A+ L 
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M++K I P++ TY S+I GFC +  W++A++L  EM+++ + P+VVT+N +++   K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA  L D M+  G+ P+  TY++++DGFC   R++ A+ +F  M + GC   + ++
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GYC  K I+  + L  EM   G+  D   +NTL  G + +  +  A  L  EM  
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYNSLI 351
           +G+  D  T  T +DGLC NG + +A+E+F  ++  K            E D++ YN LI
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GL   G+   A EL+  +P   +VP+ +TYS MI GLC   ++D+A  +F  M   +  
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 578

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           PNV+TF  LI G+ +       +EL  +M    ++ +A
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 221/439 (50%), Gaps = 9/439 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L+S   P  V F  L+  +    R     +L+ K+       D++++  L+   C  S 
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSK 129

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL+ F ++     + G+   P+ VT+TT++ GLC E  V +A +   QM +   +PN
Sbjct: 130 LPFALSTFGKIT----KLGL--HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPN 183

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+T+++ G C      EA  L   MM+ G+QP  +T+  I+D +CK G    A  LL 
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 194 LM--IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            M  + H + P+   Y+ ++D  C  GR + A+ LF  M+  G    +F+Y+ +I G+C 
Sbjct: 244 KMEEVSH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           +     A  L  EML + I PDVV +N L     +  +   A +L+DEM   G+  +T T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y + IDG CK   +  A  +F+ +    C  ++  +N+LIDG C + R++  +EL   + 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              LV +  TY+ +I G    G ++ A DL  +M  + + P+++T D L+ G     +  
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 432 KVIELLHKMKEINVMPDAS 450
             +E+   M++     DAS
Sbjct: 483 DALEMFKVMQKSKKDLDAS 501



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 222/449 (49%), Gaps = 12/449 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF+ +      P V  +  L+  + R     + ++L+++M        + C  +  
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIY 115

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++  +I   C    +  A     ++    + P+VVT+T+++ G C     +EA   F +M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +   +PNVVTF  +M+ LC+ G++ EA  LLD M++ G++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 221 NHAKELFVSMESMGCKH---TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             A  L   ME +   H    V  YS +I+  CK+     A +L++EM  KGI PD+  +
Sbjct: 236 VSALNLLRKMEEV--SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++ VG     +   A +L  EM    ++ D  TY   I+   K G   EA EL+  +  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                +   Y+S+IDG CK  RL+ A  +F  +      PN++T++ +I G C   ++D 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +L  +M E  +V +  T++ LI GF  + + +  ++LL +M    + PD      ++D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 458 LLAKNEISLNSLPSFTVHEQ-QEEVDESN 485
            L  N    ++L  F V ++ ++++D S+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASH 502



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 178/382 (46%), Gaps = 52/382 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +L+   +PD VT+ +LI     E +  EA  L+ ++   G  P+  TY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +++++G C+ +    A ++F  MA         C PN +T+ T+IDG C    +D   EL
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  +  +  TY ++I GF    D N A  L  EM+  G+ P++VT + ++D LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 182 NGKMD----------------------------------------------EASRLLDLM 195
           NGK+                                               EA  L + M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ PD  TY++++DG C   R++ A ++F SM S      V +++ LINGYCK   +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +  L L+ EM  +GI  + + + TL  G  ++  +  A  +F EM  +GV  DT T R  
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 316 IDGLCKNGYIVEAVELFHTLRI 337
           + GL     +  AV +   L++
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQM 679



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 155/321 (48%), Gaps = 1/321 (0%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF   K   +A  LF +M+     P+VV F  +M  + +  + D    L   M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D +++N L+  FC   ++  A   F  +  +G    V +++ L++G C    +  AL  +
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M     +P+VV   TL  GL    ++  A  L D M  +G+     TY T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 323 GYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           G  V A+ L   +  +     ++  Y+++ID LCK GR   A  LF  +    + P++ T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ MI G C+ G+   A  L  +M E  + P+V+T++ LI  F++  +  +  EL  +M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 442 EINVMPDASIVSIVVDLLAKN 462
              ++P+    S ++D   K 
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQ 373



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 120/237 (50%), Gaps = 3/237 (1%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G+ + K +E A+ L+S+ML     P VV    L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D +++   I   C    +  A+  F  +  L    D+  + +L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           + F  +      PNVVT++ ++ GLC +G++ +A  L   M E+ + P  IT+  ++ G 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
            +  +    + LL KM+E+ +++P+  I S ++D L K+    ++   FT  E QE+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT--EMQEK 284


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  314 bits (804), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 162/458 (35%), Positives = 259/458 (56%), Gaps = 16/458 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS    +  ++ ++   P+ VTFT+L+ GLC E RI+EA AL  ++   G +P   TY 
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+V+G+C+   T+ AL+L  +M     E   +  PN V Y+ IID LCK+G    A+ L 
Sbjct: 224 TIVDGMCKIGDTVSALDLLRKME----EISHII-PNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M++K I P++ TY S+I GFC +  W++A++L  EM+++ + P+VVT+N +++   K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA  L D M+  G+ P+  TY++++DGFC   R++ A+ +F  M + GC   + ++
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GYC  K I+  + L  EM   G+  D   +NTL  G + +  +  A  L  EM  
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYNSLI 351
           +G+  D  T  T +DGLC NG + +A+E+F  ++  K            E D++ YN LI
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GL   G+   A EL+  +P   +VP+ +TYS MI GLC   ++D+A  +F  M   +  
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 578

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           PNV+TF  LI G+ +       +EL  +M    ++ +A
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 221/439 (50%), Gaps = 9/439 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L+S   P  V F  L+  +    R     +L+ K+       D++++T L+   C  S 
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 129

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL+ F ++     + G+   P+ VT+ T++ GLC E  V +A  L  QM +   +PN
Sbjct: 130 LPFALSTFGKIT----KLGL--HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+T+++ G C      EA  L   MM+ G+QP  +T+  I+D +CK G    A  LL 
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLR 243

Query: 194 LM--IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            M  I H + P+   Y+ ++D  C  GR + A+ LF  M+  G    +F+Y+ +I G+C 
Sbjct: 244 KMEEISH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           +     A  L  EML + I PDVV +N L     +  +   A +L+DEM   G+  +T T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y + IDG CK   +  A  +F+ +    C  ++  +N+LIDG C + R++  +EL   + 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              LV +  TY+ +I G    G ++ A DL  +M  + + P+++T D L+ G     +  
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 432 KVIELLHKMKEINVMPDAS 450
             +E+   M++     DAS
Sbjct: 483 DALEMFKVMQKSKKDLDAS 501



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 224/449 (49%), Gaps = 12/449 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF+ +      P V  +  L+  + R     + ++L+++M        + C  +  
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIY 115

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++T +I   C    +  A     ++    + P+VVT+ +++ G C     +EA  LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +   +PNVVTF  +M+ LC+ G++ EA  LLD M++ G++P   TY T++DG C  G  
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT 235

Query: 221 NHAKELFVSMESMGCKH---TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             A +L   ME +   H    V  YS +I+  CK+     A +L++EM  KGI PD+  +
Sbjct: 236 VSALDLLRKMEEI--SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++ VG     +   A +L  EM    ++ D  TY   I+   K G   EA EL+  +  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                +   Y+S+IDG CK  RL+ A  +F  +      PN++T++ +I G C   ++D 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +L  +M E  +V +  T++ LI GF  + + +  ++LL +M    + PD      ++D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 458 LLAKNEISLNSLPSFTVHEQ-QEEVDESN 485
            L  N    ++L  F V ++ ++++D S+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASH 502



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 178/382 (46%), Gaps = 52/382 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +L+   +PD VT+ +LI     E +  EA  L+ ++   G  P+  TY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +++++G C+ +    A ++F  MA         C PN +T+ T+IDG C    +D   EL
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  +  +  TY ++I GF    D N A  L  EM+  G+ P++VT + ++D LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 182 NGKMD----------------------------------------------EASRLLDLM 195
           NGK+                                               EA  L + M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ PD  TY++++DG C   R++ A ++F SM S      V +++ LINGYCK   +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +  L L+ EM  +GI  + + + TL  G  ++  +  A  +F EM  +GV  DT T R  
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 316 IDGLCKNGYIVEAVELFHTLRI 337
           + GL     +  AV +   L++
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQM 679



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 157/321 (48%), Gaps = 1/321 (0%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF   K   +A  LF +M+     P+VV F  +M  + +  + D    L   M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D +++  L+  FC   ++  A   F  +  +G    V +++ L++G C    +  AL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M     +P+VV   TL  GL    ++  A  L D M  +G+     TY T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232

Query: 323 GYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           G  V A++L   +  I     ++  Y+++ID LCK GR   A  LF  +    + P++ T
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ MI G C+ G+   A  L  +M E  + P+V+T++ LI  F++  +  +  EL  +M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 442 EINVMPDASIVSIVVDLLAKN 462
              ++P+    S ++D   K 
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQ 373



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 123/237 (51%), Gaps = 3/237 (1%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G+ + K +E A+ L+S+ML     P VV    L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D +++   I   C    +  A+  F  +  L    D+  +N+L+ GLC   R+  AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +      PNVVT++ ++ GLC +G++ +A  L   M E+ + P  IT+  ++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
            +I +    ++LL KM+EI +++P+  I S ++D L K+    ++   FT  E QE+
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT--EMQEK 284


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  313 bits (802), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 171/438 (39%), Positives = 253/438 (57%), Gaps = 6/438 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +++  F V  +ILK  + PD +T+T+LI+GLC   ++ E+     +L   G + D  +Y 
Sbjct: 99  QINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYG 158

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NGLC+   T  AL L  ++       G +C P+ V Y TIIDGLCK+  V  A +L 
Sbjct: 159 TLINGLCKIGQTGPALRLLRKIE------GEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +K + PNVVTYTS+I GFC     ++A  L  EM+ + V PNV TFN ++D LCK 
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GKM EA  L+ +M++ GV PD FTYN L+DG+ L      AK +F  M  MG    V SY
Sbjct: 273 GKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSY 332

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S++I+G  K K ++ A+ L+  M ++ + PDVV +++L  GL +  ++  A K  DEM  
Sbjct: 333 SVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHD 392

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G   +  TY + ID LCK+  + +A+ L   ++    + ++  YN L+DGLCK GRL  
Sbjct: 393 RGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTD 452

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A ++F+ L       +VVTYSIMI GLC +   D+A  L   ME+   VP+ I ++ +I 
Sbjct: 453 AQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIIN 512

Query: 423 GFIRINEPSKVIELLHKM 440
            F   +   K  +LL +M
Sbjct: 513 AFFEKDMNDKAEKLLREM 530



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 240/442 (54%), Gaps = 6/442 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           +T   LI   C   +I  A ++F K+   G +PD+ TYTTL+ GLC       +LN  + 
Sbjct: 85  ITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDR 144

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           + +   +       + V+Y T+I+GLCK G    A  LL +++ +  +P+VV Y ++I G
Sbjct: 145 LVSQGIKL------DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDG 198

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C  K   +A  L+ EM ++ V PNVVT+  ++   C  G++D+A  LL+ M+   V P+
Sbjct: 199 LCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPN 258

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             T+NTL+DG C  G++  AK L   M   G    VF+Y+ L++GY   KE   A ++++
Sbjct: 259 VCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFN 318

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            M   G+  DV  ++ +  GL ++  ++ A  LF+ M+   V  D   Y + IDGLCK+G
Sbjct: 319 IMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSG 378

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            I  A++    +       ++  Y SLID LCKS +++ A+ L + +    +  N+ TY+
Sbjct: 379 RINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYN 438

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           I++ GLC DG++  A+ +F D+       +V+T+ ++I G  + +   + + LL KM++ 
Sbjct: 439 ILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDK 498

Query: 444 NVMPDASIVSIVVDLLAKNEIS 465
             +PDA     +++   + +++
Sbjct: 499 GCVPDAIAYETIINAFFEKDMN 520



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/300 (35%), Positives = 170/300 (56%), Gaps = 6/300 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   F +L  ++     P+  TF +L+ GLC E ++ EA +L   +   G  PDVFT
Sbjct: 237 VGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFT 296

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++G         A N+F  MA    + GV C+ +  +Y+ +I GL K   +D+A +
Sbjct: 297 YNALMDGYFLVKEAGKAKNVFNIMA----QMGVTCDVH--SYSVMISGLSKMKMLDEAMD 350

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M+++N+ P+VV Y+S+I G C +   N A +   EM D+G  PNV+T+  ++D LC
Sbjct: 351 LFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALC 410

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+ ++D+A  LL  +   G++ + +TYN L+DG C  GR+  A+++F  +   G    V 
Sbjct: 411 KSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVV 470

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YSI+ING CK    + AL+L S+M  KG  PD + + T+    FE    ++A KL  EM
Sbjct: 471 TYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 212/422 (50%), Gaps = 6/422 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A   F ++      P +  +  ++  L +T H  + ++LF+ M       G+  + N +
Sbjct: 32  DAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRME----LHGI--QSNYI 85

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T   +I+  C    ++ A  +  ++     +P+++TYT++IRG C      E+      +
Sbjct: 86  TLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRL 145

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + QG++ + V++  +++ LCK G+   A RLL  +     RPD   YNT++DG C    V
Sbjct: 146 VSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLV 205

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A +L+  M        V +Y+ LI G+C   +++ A  L +EM+ K + P+V   NTL
Sbjct: 206 RDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTL 265

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +  ++  A  L   M + GV  D +TY   +DG        +A  +F+ +  +  
Sbjct: 266 VDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGV 325

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+ +Y+ +I GL K   L+ A++LF  +    ++P+VV YS +I GLC  G+++ A  
Sbjct: 326 TCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALK 385

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
              +M +    PNVIT+  LI    + ++  K I LL K+K+  +  +    +I+VD L 
Sbjct: 386 YVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLC 445

Query: 461 KN 462
           K+
Sbjct: 446 KD 447



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 193/373 (51%), Gaps = 12/373 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPD 57
           +G+      +L +I      PD V + ++I GLC +  + +A  L+ ++   RVF   P+
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVF---PN 223

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           V TYT+L+ G C       A  L  EM   N        PN  T+ T++DGLCKEG + +
Sbjct: 224 VVTYTSLIYGFCIVGQLDKAFGLLNEMVLKN------VNPNVCTFNTLVDGLCKEGKMRE 277

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           AK L+  M  + + P+V TY +++ G+   K+  +AK +F  M   GV  +V +++V++ 
Sbjct: 278 AKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMIS 337

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            L K   +DEA  L + M    V PD   Y++L+DG C +GR+N A +    M   G   
Sbjct: 338 GLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPP 397

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            V +Y+ LI+  CK+ +++ A++L  ++  +GI+ ++  +N L  GL +  ++  A K+F
Sbjct: 398 NVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVF 457

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            ++   G   D  TY   I+GLCK     EA+ L   +    C  D  AY ++I+   + 
Sbjct: 458 QDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEK 517

Query: 358 GRLEIALELFRSL 370
              + A +L R +
Sbjct: 518 DMNDKAEKLLREM 530



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 172/341 (50%), Gaps = 1/341 (0%)

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++L+ +  +I PN     S    F    + N+A   F  M+     P ++ F  I+  L 
Sbjct: 2   VILRFRFHSIIPNSTLLLSHTH-FHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLV 60

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K         L   M  HG++ +  T N L++ +C   ++N A  +F  +  +G +  + 
Sbjct: 61  KTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDII 120

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI G C N +++ +L+ +  ++S+GIK D V + TL  GL +I Q   A +L  ++
Sbjct: 121 TYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI 180

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +      D   Y T IDGLCK+  + +A +L+  +   +   ++  Y SLI G C  G+L
Sbjct: 181 EGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQL 240

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  L   +    + PNV T++ ++ GLC +G+M +A+ L   M +  V P+V T++ L
Sbjct: 241 DKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNAL 300

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + G+  + E  K   + + M ++ V  D    S+++  L+K
Sbjct: 301 MDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSK 341



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 90/162 (55%), Gaps = 8/162 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++     +  +      P+ +T+TSLI  LC   ++ +A AL  K++  G + +++TY
Sbjct: 378 GRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTY 437

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+GLC+      A  +F+++        VV      TY+ +I+GLCKE   D+A  L
Sbjct: 438 NILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVV------TYSIMINGLCKESLFDEALTL 491

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE-AKRLFIEMMD 162
           L +M+DK   P+ + Y ++I  F + KD N+ A++L  EM+D
Sbjct: 492 LSKMEDKGCVPDAIAYETIINAF-FEKDMNDKAEKLLREMID 532


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  312 bits (800), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 163/443 (36%), Positives = 252/443 (56%), Gaps = 22/443 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTFT+L+ GLC E R++EA AL  ++   G +P+  TY T+V+G+C+   T+ ALNL
Sbjct: 176 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNL 235

Query: 81  F---EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
               EEM++         +PN V Y+ IIDGL K+G    A  L  +M++K I P++ TY
Sbjct: 236 LRKMEEMSH--------IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTY 287

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I GFC +  W+EA+RL  EM+++ + PNVVT++ +++   K  K  EA  L D M+ 
Sbjct: 288 NCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLP 347

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ P+  TYN+++DGFC   R++ A+ +F  M + GC   VF+++ LI+GYC  K I+ 
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDD 407

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
              L  EM   G+  D   +NTL  G   +  +  A  L  +M  +GV  D  T  T +D
Sbjct: 408 GTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 467

Query: 318 GLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYNSLIDGLCKSGRLEIALEL 366
           GLC NG + +A+E+F  ++  K            E D++ YN LI GL   G+   A EL
Sbjct: 468 GLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEEL 527

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           ++ +P   +VPN +TYS MI GLC   ++D+A  +F  M   +  P+V+TF+ L+ G+ +
Sbjct: 528 YKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCK 587

Query: 427 INEPSKVIELLHKMKEINVMPDA 449
                  +EL  +M    ++ DA
Sbjct: 588 AGRVDDGLELFCEMGRRGIVADA 610



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 222/438 (50%), Gaps = 11/438 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++S   P  + F  L+  +    R     +L+ K+       DV+++  L+   C  S 
Sbjct: 68  MVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSK 127

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL+ F ++     + G   +P+ VT++T++ GLC E  V +A +L  QM     +PN
Sbjct: 128 LPFALSTFGKIT----KLGF--QPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPN 177

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+T+++ G C      EA  L   M++ G+QPN +T+  I+D +CK G    A  LL 
Sbjct: 178 VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLR 237

Query: 194 LMIQHG-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
            M +   ++P+   Y+ ++DG    GR + A  L+  M+  G    +F+Y+ +I+G+C +
Sbjct: 238 KMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSS 297

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
                A  L  EML + I P+VV ++ L     +  +   A +L+DEM   G+  +T TY
Sbjct: 298 GRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITY 357

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            + IDG CK   +  A  +F+ +    C  D+  +N+LIDG C + R++   EL   +  
Sbjct: 358 NSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTE 417

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             LV +  TY+ +I G C  G ++ A DL   M  + V P+++T + L+ G     +   
Sbjct: 418 TGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 477

Query: 433 VIELLHKMKEINVMPDAS 450
            +E+   M++  +  DAS
Sbjct: 478 ALEMFKAMQKSKMDLDAS 495



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 211/440 (47%), Gaps = 11/440 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF+ +      P V  +  L+  + R     + ++L+++M        + C+    
Sbjct: 60  DAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ----IPCD--VY 113

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++  +I   C    +  A     ++     +P+VVT+++++ G C     +EA  LF +M
Sbjct: 114 SFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM 173

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
                +PNVVTF  +M+ LC+ G++ EA  LLD M++ G++P+  TY T++DG C  G  
Sbjct: 174 ----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDT 229

Query: 221 NHAKELFVSMESMG-CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
             A  L   ME M   K  V  YS +I+G  K+     A +LY+EM  KGI PD+  +N 
Sbjct: 230 VSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNC 289

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  G     +   A +L  EM    +  +  TY   I+   K     EA EL+  +    
Sbjct: 290 MIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG 349

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              +   YNS+IDG CK  RL+ A  +F  +      P+V T++ +I G C   ++D   
Sbjct: 350 IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGT 409

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +L  +M E  +V +  T++ LI GF  + + +  ++L  +M    V PD    + ++D L
Sbjct: 410 ELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 469

Query: 460 AKNEISLNSLPSFTVHEQQE 479
             N    ++L  F   ++ +
Sbjct: 470 CDNGKLKDALEMFKAMQKSK 489



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 168/328 (51%), Gaps = 17/328 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ +T+ S+I G C ++R+  A  +F  +   GC PDVFT+ TL++G C          L
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTEL 411

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM     E G+V +  T TY T+I G C  G ++ A +L  QM    + P++VT  ++
Sbjct: 412 LHEMT----ETGLVAD--TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 465

Query: 141 IRGFCYAKDWNEAKRLFIEM----MD-------QGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + G C      +A  +F  M    MD        GV+P+V T+N+++  L   GK  EA 
Sbjct: 466 LDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAE 525

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L   M   G+ P+  TY+++++G C   R++ A ++F SM S      V +++ L++GY
Sbjct: 526 ELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK   ++  L L+ EM  +GI  D + + TL  G  ++  +  A  +F EM  +GV  DT
Sbjct: 586 CKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDT 645

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRI 337
            T R+ +  L     +  AV +   L++
Sbjct: 646 ITIRSMLTVLWSKEELKRAVAMLEDLQM 673



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 20/307 (6%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           H F V+    K C +PD  TF +LI G C   RI +   L  ++   G   D  TY TL+
Sbjct: 375 HMFYVMA--TKGC-SPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
           +G C       AL+L ++M +       VC P+ VT  T++DGLC  G +  A E+   M
Sbjct: 432 HGFCLVGDLNAALDLSQQMISSG-----VC-PDIVTCNTLLDGLCDNGKLKDALEMFKAM 485

Query: 126 KDKN-----------IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +              ++P+V TY  +I G      + EA+ L+ EM  +G+ PN +T++ 
Sbjct: 486 QKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSS 545

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++ LCK  ++DEA+++ D M      PD  T+NTL+ G+C  GRV+   ELF  M   G
Sbjct: 546 MINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRG 605

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                 +Y  LI+G+ K   I GAL ++ EM+S G+ PD +   ++   L+   +++RA 
Sbjct: 606 IVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAV 665

Query: 295 KLFDEMQ 301
            + +++Q
Sbjct: 666 AMLEDLQ 672



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 160/321 (49%), Gaps = 5/321 (1%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF   K   +A  LF +M+     P+V+ FN +M  + +  + D    L   M +  +  
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D +++N L+  FC   ++  A   F  +  +G +  V ++S L++G C    +  AL L+
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M     +P+VV   TL  GL    +V  A  L D M  +G+  +  TY T +DG+CK 
Sbjct: 171 HQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226

Query: 323 GYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           G  V A+ L   +  +   + ++  Y+++IDGL K GR   A  L+  +    + P++ T
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFT 286

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ MI G C+ G+  +A+ L  +M E  + PNV+T+  LI  +++  +  +  EL  +M 
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEML 346

Query: 442 EINVMPDASIVSIVVDLLAKN 462
              ++P+    + ++D   K 
Sbjct: 347 PRGIIPNTITYNSMIDGFCKQ 367



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 117/219 (53%), Gaps = 5/219 (2%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G+ + K +E A+ L+S+M+     P V+  N L   +  + + +    L+ +M+R  
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D +++   I   C    +  A+  F  +  L  + D+  +++L+ GLC   R+  AL
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +LF  +      PNVVT++ ++ GLC +G++ +A  L   M E+ + PN IT+  ++ G 
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAKN 462
            +I +    + LL KM+E+ ++ P+  I S ++D L K+
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKD 262



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 5/249 (2%)

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           L  GF     +  A +LF  M       +V  ++ L+    + +  +  +SLY +M  K 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           I  DV   N L        ++  A   F ++ + G   D  T+ T + GLC    + EA+
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           +LFH +    C  ++  + +L++GLC+ GR+  A+ L   +    L PN +TY  ++ G+
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 390 CNDGQMDKARDLFLDMEE-NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           C  G    A +L   MEE + + PNV+ +  +I G  +    S    L  +M+E  + PD
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283

Query: 449 ASIVSIVVD 457
               + ++D
Sbjct: 284 LFTYNCMID 292


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  312 bits (800), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 156/411 (37%), Positives = 247/411 (60%), Gaps = 6/411 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD +TFT+LI GL   ++  EA AL  ++   GC+P++ TY 
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VNGLC+     +A NL  +M           E N V Y+T+ID LCK    D A  L 
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAK------IEANVVIYSTVIDSLCKYRHEDDALNLF 283

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M++K ++PNV+TY+S+I   C  + W++A RL  +M+++ + PNVVTFN ++D   K 
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA +L D MI+  + PD FTY++L++GFC+  R++ AK +F  M S  C   V +Y
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LING+CK K I+  + L+ EM  +G+  + V + TL  G F+    + A  +F +M  
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV  +  TY T +DGLCKNG + +A+ +F  L+  K E  I  YN +I+G+CK+G++E 
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
             +LF SL    + P+V+ Y+ MI G C  G  ++A  LF  M E+  +P+
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574



 Score =  287 bits (735), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 155/447 (34%), Positives = 251/447 (56%), Gaps = 6/447 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++S    +LG+++K  + P  VT +SL+ G C   RI +A AL  ++   G  PD  T+T
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++GL   +    A+ L + M          C+PN VTY  +++GLCK G +D A  LL
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRG------CQPNLVTYGVVVNGLCKRGDIDLAFNLL 248

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+   I+ NVV Y++VI   C  +  ++A  LF EM ++GV+PNV+T++ ++  LC  
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            +  +ASRLL  MI+  + P+  T+N L+D F   G++  A++L+  M        +F+Y
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LING+C +  ++ A  ++  M+SK   P+VV +NTL  G  +  +++   +LF EM +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  +T TY T I G  +      A  +F  +       +I  YN+L+DGLCK+G+LE 
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+ +F  L    + P + TY+IMI G+C  G+++   DLF  +    V P+VI ++ +I 
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDA 449
           GF R     +   L  KM+E   +PD+
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDS 575



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 232/452 (51%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G ++KS   P    F  L+  +    +     +L  K++  G   +++TY  L+N  C
Sbjct: 72  LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R S   +AL L  +M     + G   EP+ VT +++++G C    +  A  L+ QM +  
Sbjct: 132 RRSQISLALALLGKMM----KLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +P+ +T+T++I G       +EA  L   M+ +G QPN+VT+ V+++ LCK G +D A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL+ M    +  +   Y+T++D  C     + A  LF  ME+ G +  V +YS LI+  
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C  +    A  L S+M+ + I P+VV  N L     +  ++  A KL+DEM +  +  D 
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +TY + I+G C +  + EA  +F  +    C  ++  YN+LI+G CK+ R++  +ELFR 
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    LV N VTY+ +I G       D A+ +F  M  + V PN++T++ L+ G  +  +
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             K + +   ++   + P     +I+++ + K
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 230/456 (50%), Gaps = 10/456 (2%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G    GR     F+  +  +  +++      ++ +A  LF  +      P +F +  L++
Sbjct: 38  GMCYWGR----AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLS 93

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            + +     + ++L E+M       G+    N  TY  +I+  C+   +  A  LL +M 
Sbjct: 94  AIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
               +P++VT +S++ G+C+ K  ++A  L  +M++ G +P+ +TF  ++  L  + K  
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA  L+D M+Q G +P+  TY  +++G C  G ++ A  L   ME+   +  V  YS +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +  CK +  + AL+L++EM +KG++P+V+ +++L   L    +   A +L  +M    + 
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  T+   ID   K G +VEA +L+  +     + DI  Y+SLI+G C   RL+ A  +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  +      PNVVTY+ +I G C   ++D+  +LF +M +  +V N +T+  LI GF +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             +      +  +M    V P+    + ++D L KN
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 174/335 (51%), Gaps = 6/335 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L ++  +    + V ++++I  LC      +A  LFT++   G  P+V TY
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++ LC       A  L  +M            PN VT+  +ID   KEG + +A++L
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERK------INPNVVTFNALIDAFVKEGKLVEAEKL 352

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I P++ TY+S+I GFC     +EAK +F  M+ +   PNVVT+N +++  CK
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++DE   L   M Q G+  +  TY TL+ GF      ++A+ +F  M S G    + +
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G CKN ++E A+ ++  +    ++P +  +N +  G+ +  +VE  + LF  + 
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
             GV  D   Y T I G C+ G   EA  LF  +R
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 6/233 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +   ++K    PD  T++SLI G C   R+ EA  +F  +    C P+V TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG C+       + LF EM+    + G+V   NTVTYTT+I G  +    D A+ +
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMS----QRGLV--GNTVTYTTLIHGFFQARDCDNAQMV 457

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM    + PN++TY +++ G C      +A  +F  +    ++P + T+N++++ +CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
            GK+++   L   +   GV+PD   YNT++ GFC  G    A  LF  M   G
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 39/290 (13%)

Query: 178 ELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           E+ +NG    K+D+A  L   M++    P  F +N LL       + +    L   M+ +
Sbjct: 55  EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G  H +++Y+ILIN +C+  +I  AL+L  +M+  G +P +V  ++L  G     ++  A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             L D+M   G   DT T+ T I GL  +    EAV                   +L+D 
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-------------------ALVDR 215

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           + + G                  PN+VTY +++ GLC  G +D A +L   ME   +  N
Sbjct: 216 MVQRG----------------CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           V+ +  +I    +       + L  +M+   V P+    S ++  L   E
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 1/235 (0%)

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           IL NG   + +++ A+ L+  M+     P +   N L   + ++ + +    L ++MQR 
Sbjct: 56  ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G++ + +TY   I+  C+   I  A+ L   +  L  E  I   +SL++G C   R+  A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           + L   +      P+ +T++ +I GL    +  +A  L   M +    PN++T+ +++ G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
             +  +      LL+KM+   +  +  I S V+D L K     ++L  FT  E +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  311 bits (797), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 166/440 (37%), Positives = 258/440 (58%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G ++  F VL +I K  F PD VT T+LIKGLC   ++ EA      +   G   D  +
Sbjct: 112 LGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVS 171

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+T  T  AL +  ++       G++ +PN V Y TIID LCK+  V  A +
Sbjct: 172 YGTLINGLCKTGETRAALQVLRKID------GLLVQPNVVMYNTIIDSLCKDKLVIHASD 225

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+VVTYT++I G        EA  LF +M+ + ++P+V TFN+++D LC
Sbjct: 226 LCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLC 285

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M +A  +L +MI+ GV  +  TYN+L+DG+ L  + N A  +F +M   G    V 
Sbjct: 286 KEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQ 345

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYSI+ING CK K ++ A++L+ EM SK + P+ V +N+L  GL +  ++  A+ L +EM
Sbjct: 346 SYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM 405

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G  AD  TY + +D LCKN  + +A+ L   ++    + +I  Y  L+DGLCK+GRL
Sbjct: 406 HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRL 465

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +++ L       +V  Y++M+ GLC +G  D+A  L   ME+N  +P+ +T++ L
Sbjct: 466 KDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETL 525

Query: 421 IRGFIRINEPSKVIELLHKM 440
           +R     ++  K ++LL +M
Sbjct: 526 VRALFENDKNDKAVKLLREM 545



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 231/444 (52%), Gaps = 8/444 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  TF  LI   C    +  A ++  K+   G  PD  T TTL+ GLC       AL+ 
Sbjct: 97  PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF 156

Query: 81  FEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            ++ +A G          + V+Y T+I+GLCK G    A ++L ++    ++PNVV Y +
Sbjct: 157 HDDVIAKG-------FHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNT 209

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C  K    A  L  EM+ + + P+VVT+  ++      G++ EA  L + M+   
Sbjct: 210 IIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKN 269

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           ++PD +T+N L+DG C  G +  A+ +   M   G    + +Y+ L++GY   K+   A 
Sbjct: 270 IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT 329

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +++ M  +G+ PDV  ++ +  GL +   V+ A  LF EM    +A +T TY + IDGL
Sbjct: 330 FVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGL 389

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K G I +A +L + +       D+  Y+SL+D LCK+ +++ A+ L   +    + PN+
Sbjct: 390 LKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNI 449

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+I++ GLC +G++  A+ ++ D+       +V  +++++ G  +     + + L+ K
Sbjct: 450 YTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSK 509

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           M++   +PDA     +V  L +N+
Sbjct: 510 MEDNGCIPDAVTYETLVRALFEND 533



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 184/362 (50%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           +  I+  L K      A     QM+ K I+P++ T+  +I  FC+    N A  +  ++ 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
             G  P+ VT   ++  LC NGK+ EA    D +I  G   D  +Y TL++G C TG   
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A ++   ++ +  +  V  Y+ +I+  CK+K +  A  L SEM+ K I PDVV + TL 
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G   + +++ A  LF++M    +  D +T+   +DGLCK G + +A  +   +     +
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            +I  YNSL+DG     +   A  +F ++    + P+V +YSIMI GLC    +D+A +L
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F +M   ++ PN +T++ LI G ++    S   +L+++M       D    S ++D L K
Sbjct: 367 FKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCK 426

Query: 462 NE 463
           N 
Sbjct: 427 NH 428



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 168/325 (51%), Gaps = 30/325 (9%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I+K  F PD VT+T+LI G     R+ EA  LF ++ +   +PDV+T+  LV+GLC+   
Sbjct: 231 IVKRIF-PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGE 289

Query: 74  TIVALNLFEEMANG-------------NGEFGVVCE----------------PNTVTYTT 104
              A N+   M                +G F V  E                P+  +Y+ 
Sbjct: 290 MKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSI 349

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           +I+GLCK   VD+A  L  +M  K++ PN VTY S+I G       ++A  L  EM ++G
Sbjct: 350 MINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRG 409

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
              +V+T++ ++D LCKN ++D+A  L+  +   G++P+ +TY  L+DG C  GR+  A+
Sbjct: 410 QPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQ 469

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            ++  +   G    V  Y++++NG CK    + ALSL S+M   G  PD V + TL   L
Sbjct: 470 AVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRAL 529

Query: 285 FEIHQVERAFKLFDEMQRNGVAADT 309
           FE  + ++A KL  EM   G A  +
Sbjct: 530 FENDKNDKAVKLLREMIVQGSAVGS 554



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 154/304 (50%), Gaps = 1/304 (0%)

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           M   VQP +  FN I+  L K      A      M    ++PD FT+N L++ FC  G +
Sbjct: 57  MRNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHL 115

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A  +   +  +G      + + LI G C N ++  AL  + ++++KG   D V + TL
Sbjct: 116 NFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTL 175

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +  +   A ++  ++    V  +   Y T ID LCK+  ++ A +L   + + + 
Sbjct: 176 INGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRI 235

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  Y +LI G    GRL+ A+ LF  +    + P+V T++I++ GLC +G+M KAR+
Sbjct: 236 FPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARN 295

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           +   M +  V  N++T++ L+ G+  + + +K   + + M    V PD    SI+++ L 
Sbjct: 296 VLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLC 355

Query: 461 KNEI 464
           K ++
Sbjct: 356 KTKM 359



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 3/184 (1%)

Query: 287 IHQVERAFKLFDEM--QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
           I  V+ A   F+ +   RN V    + +   +  L K  +   A+     + + + + D+
Sbjct: 41  IDNVDDAVSSFNHILHMRNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDL 99

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             +N LI+  C  G L  A  +   +      P+ VT + +I GLC +G++ +A     D
Sbjct: 100 FTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDD 159

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           +       + +++  LI G  +  E    +++L K+  + V P+  + + ++D L K+++
Sbjct: 160 VIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKL 219

Query: 465 SLNS 468
            +++
Sbjct: 220 VIHA 223


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  310 bits (794), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 156/416 (37%), Positives = 247/416 (59%), Gaps = 6/416 (1%)

Query: 44  ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
           AL  ++   GC+PD+ TY  +VNGLC+   T +A NL  +M  G        EP  + Y 
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK------LEPGVLIYN 55

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           TIIDGLCK   +D A  L  +M+ K I+PNVVTY+S+I   C    W++A RL  +M+++
Sbjct: 56  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
            + P+V TF+ ++D   K GK+ EA +L D M++  + P   TY++L++GFC+  R++ A
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 175

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           K++F  M S  C   V +Y+ LI G+CK K +E  + ++ EM  +G+  + V +N L  G
Sbjct: 176 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           LF+    + A ++F EM  +GV  +  TY T +DGLCKNG + +A+ +F  L+  K E  
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           I  YN +I+G+CK+G++E   +LF +L    + P+VV Y+ MI G C  G  ++A  LF 
Sbjct: 296 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 355

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +M+E+  +PN   ++ LIR  +R  +     EL+ +M+      DAS + +V ++L
Sbjct: 356 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 411



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 214/397 (53%), Gaps = 6/397 (1%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
            ++ R++     PD VT+  ++ GLC       A  L  K+     EP V  Y T+++GL
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C+  H   ALNLF+EM            PN VTY+++I  LC  G    A  LL  M ++
Sbjct: 62  CKYKHMDDALNLFKEMETKG------IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            I P+V T++++I  F       EA++L+ EM+ + + P++VT++ +++  C + ++DEA
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 175

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++ + M+     PD  TYNTL+ GFC   RV    E+F  M   G      +Y+ILI G
Sbjct: 176 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
             +  + + A  ++ EM+S G+ P+++ +NTL  GL +  ++E+A  +F+ +QR+ +   
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            +TY   I+G+CK G + +  +LF  L +   + D+ AYN++I G C+ G  E A  LF+
Sbjct: 296 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 355

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            +     +PN   Y+ +I     DG  + + +L  +M
Sbjct: 356 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 392



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 205/404 (50%), Gaps = 10/404 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     F +L ++ +    P  + + ++I GLC    + +A  LF ++   G  P+V TY
Sbjct: 30  GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 89

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++ LC       A  L  +M            P+  T++ +ID   KEG + +A++L
Sbjct: 90  SSLISCLCNYGRWSDASRLLSDMIERK------INPDVFTFSALIDAFVKEGKLVEAEKL 143

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  ++I P++VTY+S+I GFC     +EAK++F  M+ +   P+VVT+N ++   CK
Sbjct: 144 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 203

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++E   +   M Q G+  +  TYN L+ G    G  + A+E+F  M S G    + +
Sbjct: 204 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 263

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G CKN ++E A+ ++  +    ++P +  +N +  G+ +  +VE  + LF  + 
Sbjct: 264 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 323

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  D   Y T I G C+ G   EA  LF  ++      +   YN+LI    + G  E
Sbjct: 324 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 383

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            + EL + +       +  T   ++  + +DG++DK+   FLDM
Sbjct: 384 ASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS---FLDM 423



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 164/306 (53%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           L   M+ +G QP++VT+ V+++ LCK G  D A  LL+ M Q  + P    YNT++DG C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
               ++ A  LF  ME+ G +  V +YS LI+  C       A  L S+M+ + I PDV 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             + L     +  ++  A KL+DEM +  +     TY + I+G C +  + EA ++F  +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               C  D+  YN+LI G CK  R+E  +E+FR +    LV N VTY+I+I GL   G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           D A+++F +M  + V PN++T++ L+ G  +  +  K + +   ++   + P     +I+
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 456 VDLLAK 461
           ++ + K
Sbjct: 303 IEGMCK 308



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 146/272 (53%)

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L+D M+  G +PD  TY  +++G C  G  + A  L   ME    +  V  Y+ +I+G C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K K ++ AL+L+ EM +KGI+P+VV +++L   L    +   A +L  +M    +  D +
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           T+   ID   K G +VEA +L+  +     +  I  Y+SLI+G C   RL+ A ++F  +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                 P+VVTY+ +I G C   ++++  ++F +M +  +V N +T+++LI+G  +  + 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               E+  +M    V P+    + ++D L KN
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 274



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 98/182 (53%), Gaps = 3/182 (1%)

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           ++L   M++KG +PD+V +  +  GL +    + AF L ++M++  +      Y T IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK  ++ +A+ LF  +       ++  Y+SLI  LC  GR   A  L   +    + P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIE 435
           V T+S +I     +G++ +A  L+ +M + ++ P+++T+  LI GF    R++E  ++ E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 436 LL 437
            +
Sbjct: 181 FM 182


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 165/440 (37%), Positives = 253/440 (57%), Gaps = 21/440 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   F +  +ILK  + P+ +T T+L+KG C   ++ EA      +   G   +  +
Sbjct: 119 LGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVS 178

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  AL +  ++       G +   + V Y+TIIDGLCK+  V+ A E
Sbjct: 179 YGTLINGLCKIGETRAALQMLRQIE------GKLVSTDVVMYSTIIDGLCKDKLVNDAYE 232

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P VVT  S+I G+C    + EA  L  EM+ + + P+V TFN+++D LC
Sbjct: 233 LYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALC 292

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA   + +M++ GV PD  TY++L+DG+CL   VN AK +              
Sbjct: 293 KEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV-------------- 338

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            YSI+ING+CK K ++ ALSL+ EM  + I PD V +N+L  GL +  ++  A++L DEM
Sbjct: 339 -YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEM 397

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           + +G  AD  TY + ID LCKN ++ +A+ L   ++    + D+  YN LIDGLCK GRL
Sbjct: 398 RDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRL 457

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +F+ L        V TY+IMI GLC +G +++A  L   ME+N  VP+ +T + +
Sbjct: 458 KDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETI 517

Query: 421 IRGFIRINEPSKVIELLHKM 440
           IR     ++  +  +LL +M
Sbjct: 518 IRALFENDKNERAEKLLREM 537



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/443 (32%), Positives = 227/443 (51%), Gaps = 21/443 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V+ + LI   C   ++  A ++F K+   G  P+  T TTLV G C       AL+ 
Sbjct: 104 PNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHF 163

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + +      F      N V+Y T+I+GLCK G    A ++L Q++ K +  +VV Y+++
Sbjct: 164 HDHVLALGFHF------NQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTI 217

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C  K  N+A  L+ EM+ + + P VVT N ++   C  G+  EA  LL  M+   +
Sbjct: 218 IDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNI 277

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD +T+N L+D  C  G++  AK     M   G    V +YS L++GYC   E+  A  
Sbjct: 278 NPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKH 337

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +YS          +VI+     G  +I  V++A  LF EM+   +A DT TY + IDGLC
Sbjct: 338 VYS----------IVIN-----GFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLC 382

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+G I  A EL   +R      DI  YNSLID LCK+  ++ A+ L + +    +  ++ 
Sbjct: 383 KSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMY 442

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I+I GLC  G++  A+ +F D+        V T+ ++I G       ++   LL KM
Sbjct: 443 TYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKM 502

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
           ++   +PDA     ++  L +N+
Sbjct: 503 EDNGCVPDAVTCETIIRALFEND 525



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 183/386 (47%), Gaps = 20/386 (5%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ + +  I+  L K         L  Q++   IKPN+V+ + +I  +C+      A  +
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F +++  G  PN +T   ++   C N K+ EA    D ++  G   +  +Y TL++G C 
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G    A ++   +E       V  YS +I+G CK+K +  A  LYSEM++K I P VV 
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            N+L  G   + Q + AF L  EM    +  D +T+   +D LCK G I EA      + 
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308

Query: 337 ILKCEFDIRAYNSLID--------------------GLCKSGRLEIALELFRSLPCGVLV 376
                 D+  Y+SL+D                    G CK   ++ AL LF  + C  + 
Sbjct: 309 KEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIA 368

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+ VTY+ +I GLC  G++  A +L  +M ++    ++IT++ LI    + +   K I L
Sbjct: 369 PDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIAL 428

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
           + K+K+  +  D    +I++D L K 
Sbjct: 429 VKKIKDQGIQLDMYTYNILIDGLCKQ 454



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 156/307 (50%), Gaps = 25/307 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    F +L  ++     PD  TF  L+  LC E +I EA +    +   G  PDV T
Sbjct: 259 VGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVT 318

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV--TYTTIIDGLCKEGFVDKA 118
           Y++L++G C                       +V E N     Y+ +I+G CK   VDKA
Sbjct: 319 YSSLMDGYC-----------------------LVNEVNKAKHVYSIVINGFCKIKMVDKA 355

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             L  +M+ + I P+ VTY S+I G C +   + A  L  EM D G   +++T+N ++D 
Sbjct: 356 LSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDA 415

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCKN  +D+A  L+  +   G++ D +TYN L+DG C  GR+  A+ +F  +   G   T
Sbjct: 416 LCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLT 475

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V++Y+I+ING C    +  A +L S+M   G  PD V   T+   LFE  + ERA KL  
Sbjct: 476 VWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLR 535

Query: 299 EMQRNGV 305
           EM   G+
Sbjct: 536 EMIARGL 542


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  308 bits (790), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 169/440 (38%), Positives = 249/440 (56%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F VL  ILK  + PD +T T+LIKGLC    + +A      +     + D  +
Sbjct: 117 LGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRIS 176

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  A+ L   +   +       +P+ V Y  IID LCK   V +A  
Sbjct: 177 YGTLINGLCKIGETKAAIQLMRNLEERS------IKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I PNVVTYT++I GFC      EA  L  EM  + + P+V TF++++D L 
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALG 290

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GKM  A  +L +M++  V+PD  TYN+L+DG+ L   V HAK +F SM   G    V 
Sbjct: 291 KEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQ 350

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+I+G CK K ++ A+SL+ EM  K + P+ +  N+L  GL +  ++   + L D+M
Sbjct: 351 SYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKM 410

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +     AD  TY + ID LCKN ++ +A+ LF  +   + + D+  Y  LIDGLCK GRL
Sbjct: 411 RDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRL 470

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +IA E+F+ L       ++ TY++MI G C  G  D+A  L   ME+N  +PN ITFD++
Sbjct: 471 KIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDII 530

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I      +E  K  +LL +M
Sbjct: 531 ICALFEKDENDKAEKLLREM 550



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 234/445 (52%), Gaps = 7/445 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           T D VT   LI   C   +I  + ++   +   G  PDV T TTL+ GLC       AL 
Sbjct: 101 TSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALK 160

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
             +++     EF    + + ++Y T+I+GLCK G    A +L+  +++++IKP+VV Y  
Sbjct: 161 FHDDVVAL--EF----QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNI 214

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C  K   EA  L+ EM  + + PNVVT+  ++   C  G + EA  LL+ M    
Sbjct: 215 IIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKN 274

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD +T++ L+D     G++  AK +   M     K  V +Y+ L++GY    E++ A 
Sbjct: 275 INPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAK 334

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +++ M   G+ P V  +  +  GL +   V+ A  LF+EM+   V  +T T+ + IDGL
Sbjct: 335 YVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGL 394

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK+G I    +L   +R      D+  Y+SLID LCK+  L+ A+ LF+ +    + P++
Sbjct: 395 CKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDM 454

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+I+I GLC  G++  A+++F  +       ++ T+ ++I GF +     + + LL K
Sbjct: 455 YTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSK 514

Query: 440 MKEINVMPDASIVSIVV-DLLAKNE 463
           M++   +P+A    I++  L  K+E
Sbjct: 515 MEDNGCIPNAITFDIIICALFEKDE 539



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 184/366 (50%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P T  +  I+  L K      A  L   +  K I  ++VT   +I  FC+      +  +
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              ++ +G  P+V+T   ++  LC  G++ +A +  D ++    + D  +Y TL++G C 
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G    A +L  ++E    K  V  Y+I+I+  CKNK +  A +LYSEM +K I P+VV 
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + TL  G   +  +  A  L +EM+   +  D +T+   ID L K G +  A  +   + 
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + D+  YNSL+DG      ++ A  +F S+    + P V +Y+IMI GLC    +D
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A  LF +M+   V+PN ITF+ LI G  +    + V +L+ KM++ + + D    S ++
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426

Query: 457 DLLAKN 462
           D L KN
Sbjct: 427 DALCKN 432



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 162/310 (52%), Gaps = 16/310 (5%)

Query: 6   HGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           +GF ++G ++++             PD  TF+ LI  L  E ++  A  +   +     +
Sbjct: 252 YGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVK 311

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PDV TY +LV+G    +    A  +F  MA      GV   P   +YT +IDGLCK   V
Sbjct: 312 PDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQS----GVT--PGVQSYTIMIDGLCKTKMV 365

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A  L  +MK KN+ PN +T+ S+I G C +        L  +M D+    +V+T++ +
Sbjct: 366 DEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSL 425

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D LCKN  +D+A  L   MI   ++PD +TY  L+DG C  GR+  A+E+F  +   G 
Sbjct: 426 IDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGY 485

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + +Y+++I+G+CK    + AL+L S+M   G  P+ +  + +   LFE  + ++A K
Sbjct: 486 HLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEK 545

Query: 296 LFDEMQRNGV 305
           L  EM   G+
Sbjct: 546 LLREMIARGL 555



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 148/269 (55%), Gaps = 6/269 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++    +VL  ++K+   PD VT+ SL+ G    + +  A  +F  +   G  P V +Y
Sbjct: 293 GKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSY 352

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +++GLC+T     A++LFEEM + N        PNT+T+ ++IDGLCK G +    +L
Sbjct: 353 TIMIDGLCKTKMVDEAISLFEEMKHKN------VIPNTITFNSLIDGLCKSGRIAYVWDL 406

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+D++   +V+TY+S+I   C     ++A  LF +M+ Q +QP++ T+ +++D LCK
Sbjct: 407 VDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCK 466

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++  A  +   ++  G   D  TY  ++ GFC  G  + A  L   ME  GC     +
Sbjct: 467 GGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAIT 526

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGI 270
           + I+I    +  E + A  L  EM+++G+
Sbjct: 527 FDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 159/338 (47%), Gaps = 6/338 (1%)

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
           D N+A  LF  M+     P    FN I+  L K  +   A  L   +   G+  D  T N
Sbjct: 49  DHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLN 108

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L++ FC  G++  +  +  ++   G    V + + LI G C   E++ AL  + ++++ 
Sbjct: 109 ILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVAL 168

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
             + D + + TL  GL +I + + A +L   ++   +  D   Y   ID LCKN  + EA
Sbjct: 169 EFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEA 228

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
             L+  +   +   ++  Y +LI G C  G L  A+ L   +    + P+V T+SI+I  
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDA 288

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           L  +G+M  A+ +   M +  V P+V+T++ L+ G+  +NE      + + M +  V P 
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNV 486
               +I++D L K ++   ++  F      EE+   NV
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLF------EEMKHKNV 380


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  308 bits (790), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 165/442 (37%), Positives = 257/442 (58%), Gaps = 6/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T T +I   C  +R+  A ++  K+   G +PD  T+TTLV GLC       AL++
Sbjct: 89  PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDV 148

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F++M  G G      +PN VTY T+++GLCK+  + +A  L  +M  K I P++ TY S+
Sbjct: 149 FDKMV-GEG-----FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSL 202

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C   +W     L  EM+   + PNVV+ N+++D LCK GK+ EA  ++D+MIQ GV
Sbjct: 203 IHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV 262

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY  L+DG CL   ++ A ++F  M   GC   V SY+ LINGYCK + I+ A+ 
Sbjct: 263 EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMY 322

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM  + + P+ + ++TL  GL  + +++ A  LF+EM   G   +  TY   +D LC
Sbjct: 323 LFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLC 382

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           KN  + EA+ L   +     + D++ YN  IDG+C++G LE A +LF +L    L P+V 
Sbjct: 383 KNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVW 442

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++IMI GLC  G +D+A  LF +M+EN  + N  T++ + +G ++ N+ S+ I+LL +M
Sbjct: 443 THNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEM 502

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
                  D S  +++V +L+ +
Sbjct: 503 LARGFSADVSTTALLVKMLSDD 524



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 216/422 (51%), Gaps = 29/422 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV     VL +ILK    PD  TFT+L++GLC   +I EA  +F K+   G +P+V T
Sbjct: 104 LNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVT 163

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM-ANG--------NGEFGVVCE--------------- 96
           Y TL+NGLC+      ALNLF EM A G        N     +C                
Sbjct: 164 YGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 223

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                PN V+   ++D LCKEG V +A +++  M    ++P+VVTY +++ G C   + +
Sbjct: 224 KSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD 283

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           EA ++F  M+  G   NVV++N +++  CK  ++D+A  L + M +  + P+  TY+TL+
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C  GR+  A  LF  M + G    + +YSIL++  CKN  +  A++L   +    + 
Sbjct: 344 HGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLD 403

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PDV ++N    G+     +E A  LF  +   G+  D WT+   I GLCK G + EA +L
Sbjct: 404 PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKL 463

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +    C  +   YN++  GL ++ +   A++L   +       +V T ++++  L +
Sbjct: 464 FREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSD 523

Query: 392 DG 393
           DG
Sbjct: 524 DG 525



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 186/361 (51%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P    +  ++  + K         L  +M    I P+V T T VI  FC+    + A  +
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TF  ++  LC  GK+ EA  + D M+  G +P+  TY TL++G C 
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             ++  A  LF  M + G    +F+Y+ LI+  C   E +   +L +EM+   I P+VV 
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            N +   L +  +V  A  + D M + GV  D  TY   +DG C    + EAV++F  + 
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C  ++ +YN+LI+G CK  R++ A+ LF  +    L+PN +TYS +I GLC+ G++ 
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQ 353

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  LF +M     +PN++T+ +L+    + +  ++ + LL  ++  N+ PD  + +I +
Sbjct: 354 DAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAI 413

Query: 457 D 457
           D
Sbjct: 414 D 414



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 182/349 (52%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D A     +M   +  P +  +  ++      K ++    L  +M   G+ P+V T  +
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++  C   ++D A  +L  +++ G +PD  T+ TL+ G C+ G++  A ++F  M   G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            +  V +Y  L+NG CK++++  AL+L+SEM++KGI PD+  +N+L   L  + + +   
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            L +EM ++ +  +  +    +D LCK G + EA ++   +     E D+  Y +L+DG 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C    ++ A+++F  +     V NVV+Y+ +I G C   ++DKA  LF +M    ++PN 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +T+  LI G   +      I L ++M     +P+    SI++D L KN 
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNH 385


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  308 bits (789), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 163/440 (37%), Positives = 250/440 (56%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F VL +ILK  + PD +T  + IKG C + +I +A     KL   G   D  +
Sbjct: 118 LGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVS 177

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  AL L   +       G + + + V Y+TIID +CK+  V+ A +
Sbjct: 178 YGTLINGLCKVGETRAALELLRRVD------GKLVQLDVVMYSTIIDSMCKDKNVNDAFD 231

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I  N+VTY+++I GFC      +A  LF +M  + + P+V TFN+++D  C
Sbjct: 232 LYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFC 291

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ EA   L +M++ G++PD  TYN+L+DG+CL   VN AK +  +M   G   TV 
Sbjct: 292 KEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVR 351

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+ING+CK K ++ A+ L+ EM  K I P+V+ +N+L  GL +  ++  A +L D M
Sbjct: 352 SYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLM 411

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D  TY + +D LCKN  + +A+ L   L+      ++  Y  LIDGLCK GRL
Sbjct: 412 HDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRL 471

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A  +F  L        V TY++MI G C+ G  D+A  L   M++N+ +P+ IT++++
Sbjct: 472 EDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEII 531

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I      +E  K  +LL +M
Sbjct: 532 ICSLFDKDENDKAEKLLREM 551



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 146/444 (32%), Positives = 236/444 (53%), Gaps = 7/444 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V F  LI   C    I  A ++  K+   G EPD  T  T + G C       ALN 
Sbjct: 103 PNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNF 162

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +++        +    + V+Y T+I+GLCK G    A ELL ++  K ++ +VV Y+++
Sbjct: 163 HDKLV------ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTI 216

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  K+ N+A  L+ EM+ + +  N+VT++ ++   C  GK+ +A  L + M    +
Sbjct: 217 IDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENI 276

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD +T+N L+D FC  GRV  AK     M   G K  + +Y+ L++GYC   E+  A S
Sbjct: 277 NPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKS 336

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + + M  +G+   V  +N +  G  +I  V++A KLF EM    +  +  TY + IDGLC
Sbjct: 337 ILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLC 396

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+G I  A+EL   +     + DI  Y+S++D LCK+  ++ A+ L   L    + PN+ 
Sbjct: 397 KSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMY 456

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I+I GLC  G+++ AR++F D+        V T+ ++I+GF       + + LL KM
Sbjct: 457 TYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKM 516

Query: 441 KEINVMPDASIVSIVV-DLLAKNE 463
           K+ + +PDA    I++  L  K+E
Sbjct: 517 KDNSCIPDAITYEIIICSLFDKDE 540



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 208/441 (47%), Gaps = 42/441 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  ++      PD  TF  L+   C E R+ EA      +   G +PD+ T
Sbjct: 258 VGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVT 317

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G C  +     +N+ + + N     GV       +Y  +I+G CK   VD+A +
Sbjct: 318 YNSLMDGYCLVNE----VNMAKSILNTMSHRGVT--ATVRSYNIVINGFCKIKMVDQAMK 371

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I PNV+TY S+I G C +   + A  L   M D+G QP+++T++ I+D LC
Sbjct: 372 LFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALC 431

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN  +D+A  LL  +   G+RP+ +TY  L+DG C  GR+  A+ +F  +   G   TV 
Sbjct: 432 KNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVN 491

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I G+C +   + ALSL S+M      PD + +  +   LF+  + ++A KL  EM
Sbjct: 492 TYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREM 551

Query: 301 QRNGVAADTWTYRTF-IDGLCKNGYIVEAVELFHT------------LRILKCEF----- 342
              G+      Y ++ +  +    + +    L  T            L  + C+      
Sbjct: 552 ITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKS 611

Query: 343 -----DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                D+   + +I   C   +    L+             V TY++MI G C+ G  D+
Sbjct: 612 NMRDKDVECPSVIIYSTCDWSKQGYILD-------------VNTYTVMIQGFCSHGLFDE 658

Query: 398 ARDLFLDMEENAVVPNVITFD 418
           +  L   ME N  +P+ +T+D
Sbjct: 659 SLALLSKMEVNGCIPDAVTYD 679



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 215/423 (50%), Gaps = 6/423 (1%)

Query: 39  IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           +++A +LF  L      P    +  ++  L ++ H    L+LF++M     E+  + +PN
Sbjct: 51  VVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKM-----EYRGI-KPN 104

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
            V +  +I+  C+ G +  A  +L ++     +P+ +T  + I+GFC     ++A     
Sbjct: 105 FVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHD 164

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           +++  G   + V++  +++ LCK G+   A  LL  +    V+ D   Y+T++D  C   
Sbjct: 165 KLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDK 224

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            VN A +L+  M S      + +YS LI+G+C   +++ A+ L+++M S+ I PDV   N
Sbjct: 225 NVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFN 284

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L     +  +V+ A      M + G+  D  TY + +DG C    +  A  + +T+   
Sbjct: 285 ILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR 344

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
                +R+YN +I+G CK   ++ A++LF+ +    + PNV+TY+ +I GLC  G++  A
Sbjct: 345 GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            +L   M +    P++IT+  ++    + +   K I LL K+K+  + P+    +I++D 
Sbjct: 405 LELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464

Query: 459 LAK 461
           L K
Sbjct: 465 LCK 467



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 177/368 (48%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P  + +  I+  L K         L  +M+ + IKPN V +  +I  FC       A  +
Sbjct: 68  PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G +P+ +T N  +   C  G++ +A    D ++  G   D  +Y TL++G C 
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 187

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G    A EL   ++    +  V  YS +I+  CK+K +  A  LYSEM+S+ I  ++V 
Sbjct: 188 VGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           ++ L  G   + +++ A  LF++M    +  D +T+   +D  CK G + EA      + 
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + DI  YNSL+DG C    + +A  +  ++    +   V +Y+I+I G C    +D
Sbjct: 308 KQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD 367

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A  LF +M    + PNVIT++ LI G  +    S  +EL+  M +    PD    S ++
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSIL 427

Query: 457 DLLAKNEI 464
           D L KN +
Sbjct: 428 DALCKNHL 435



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 130/276 (47%)

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N  + +A  L + +++    P    +  +L     +   +    LF  ME  G K    +
Sbjct: 48  NNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVN 107

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILIN +C+   I  A S+ +++L  G +PD +  NT   G     Q+ +A    D++ 
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  +Y T I+GLCK G    A+EL   +     + D+  Y+++ID +CK   + 
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L+  +    +  N+VTYS +I G C  G++  A  LF  M    + P+V TF++L+
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILV 287

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             F +     +    L  M +  + PD    + ++D
Sbjct: 288 DAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMD 323


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  308 bits (788), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 251/439 (57%), Gaps = 6/439 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   F  + +ILK  + P+ +T  +L+KGLC E ++ EA     K+   G      +Y
Sbjct: 107 GQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISY 166

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG+C+   T  A+ L   +   +        PN V Y+ IID LCK+  VD+A +L
Sbjct: 167 GILINGVCKIGETRAAIRLLRRIERWS------IRPNVVIYSMIIDRLCKDTLVDEAYDL 220

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K I P+VVTY+ ++ GFC     N A  L  EM+ + + P++ T+ +++D LCK
Sbjct: 221 YTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCK 280

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA  +L +M++  V  D   Y+TL+DG+CL   VN+AK +F +M  MG    V  
Sbjct: 281 EGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHC 340

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSI+ING CK K ++ AL+L+ E+  K + PD V + +L   L +  ++   + LFDEM 
Sbjct: 341 YSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEML 400

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY   ID LCKNG++  A+ LF+ ++      ++  +  L+DGLCK GRL+
Sbjct: 401 DRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLK 460

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALE F+ L       NV TY++MI GLC +G +D+A  L   ME+N  + + +TF+++I
Sbjct: 461 NALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMI 520

Query: 422 RGFIRINEPSKVIELLHKM 440
           R F   +E  K  +L+ +M
Sbjct: 521 RAFFDKDENDKAEKLVREM 539



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 229/437 (52%), Gaps = 8/437 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T   +I   C   +++ A +  +K+   G +P+  T  TL+ GLC       AL  
Sbjct: 91  PDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRF 150

Query: 81  FEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            ++ +A G    G+       +Y  +I+G+CK G    A  LL +++  +I+PNVV Y+ 
Sbjct: 151 HDKVLAQGFRLSGI-------SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSM 203

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C     +EA  L+ EM+ +G+ P+VVT+++++   C  G+++ A  LL+ M+   
Sbjct: 204 IIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLEN 263

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD +TY  L+D  C  G+V  A+ +   M        V  YS L++GYC   E+  A 
Sbjct: 264 INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAK 323

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++  M   G+ PDV  ++ +  GL +I +V+ A  LF+E+ +  +  DT TY + ID L
Sbjct: 324 RVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCL 383

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK+G I    +LF  +       D+  YN+LID LCK+G L+ A+ LF  +    + PNV
Sbjct: 384 CKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNV 443

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            T++I++ GLC  G++  A + F D+       NV T+ ++I G  +     + + L  +
Sbjct: 444 YTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSR 503

Query: 440 MKEINVMPDASIVSIVV 456
           M++   + DA    I++
Sbjct: 504 MEDNGCISDAVTFEIMI 520



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 221/421 (52%), Gaps = 6/421 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP    F  ++  L    R   A +L+ ++ +   EPD FT   ++N  C     ++A +
Sbjct: 55  TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
              ++     + G   +PNT+T  T++ GLC EG V +A     ++  +  + + ++Y  
Sbjct: 115 GVSKIL----KLGY--QPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGI 168

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C   +   A RL   +    ++PNVV +++I+D LCK+  +DEA  L   M+  G
Sbjct: 169 LINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKG 228

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD  TY+ L+ GFC+ G++N A +L   M        +++Y+IL++  CK  +++ A 
Sbjct: 229 ISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAE 288

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           ++ + M+   +  DVV+++TL  G   +++V  A ++F  M + GV  D   Y   I+GL
Sbjct: 289 NVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGL 348

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   + EA+ LF  +       D   Y SLID LCKSGR+    +LF  +      P+V
Sbjct: 349 CKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDV 408

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +TY+ +I  LC +G +D+A  LF  M++ A+ PNV TF +L+ G  ++      +E    
Sbjct: 409 ITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQD 468

Query: 440 M 440
           +
Sbjct: 469 L 469



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 184/331 (55%), Gaps = 6/331 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G       +L RI +    P+ V ++ +I  LC ++ + EA  L+T++   G  PDV T
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ LV+G C       A++L  EM   N        P+  TYT ++D LCKEG V +A+ 
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLEN------INPDIYTYTILVDALCKEGKVKEAEN 289

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  M    +  +VV Y++++ G+C   + N AKR+F  M   GV P+V  ++++++ LC
Sbjct: 290 VLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLC 349

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++DEA  L + + Q  + PD  TY +L+D  C +GR+++  +LF  M   G    V 
Sbjct: 350 KIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVI 409

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+  CKN  ++ A++L+++M  + I+P+V     L  GL ++ +++ A + F ++
Sbjct: 410 TYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDL 469

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
              G   +  TY   I+GLCK G + EA+ L
Sbjct: 470 LTKGYCLNVRTYTVMINGLCKEGLLDEALAL 500



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 224/459 (48%), Gaps = 14/459 (3%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIM--------EAAALFTKLRVFGCEPDVFTYT 62
           + R L+ C +     F   +  LC  S  +        +A + F  +      P  F + 
Sbjct: 3   MSRRLRYCLSLSIPNFPPFLPNLCFHSHSLPPLTHNADDAVSQFNHMFHVHPTPHTFHFN 62

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++  L        A++L+++M     E   V EP+  T   II+  C  G V  A   +
Sbjct: 63  KILISLVNVKRYPTAISLYKQM-----ELSEV-EPDYFTLNIIINCFCHFGQVVLAFSGV 116

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            ++     +PN +T  ++++G C      EA R   +++ QG + + +++ ++++ +CK 
Sbjct: 117 SKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKI 176

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+   A RLL  + +  +RP+   Y+ ++D  C    V+ A +L+  M   G    V +Y
Sbjct: 177 GETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTY 236

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           SIL++G+C   ++  A+ L +EM+ + I PD+  +  L   L +  +V+ A  +   M +
Sbjct: 237 SILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVK 296

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             V  D   Y T +DG C    +  A  +F+T+  +    D+  Y+ +I+GLCK  R++ 
Sbjct: 297 ACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDE 356

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           AL LF  +    +VP+ VTY+ +I  LC  G++    DLF +M +    P+VIT++ LI 
Sbjct: 357 ALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLID 416

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              +     + I L +KMK+  + P+    +I++D L K
Sbjct: 417 ALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCK 455



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 162/305 (53%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++    +L  ++     PD  T+T L+  LC E ++ EA  +   +       DV  
Sbjct: 246 VGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVV 305

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TL++G C  +    A  +F  M     + GV   P+   Y+ +I+GLCK   VD+A  
Sbjct: 306 YSTLMDGYCLVNEVNNAKRVFYTMT----QMGVT--PDVHCYSIMINGLCKIKRVDEALN 359

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++  KN+ P+ VTYTS+I   C +   +    LF EM+D+G  P+V+T+N ++D LC
Sbjct: 360 LFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALC 419

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG +D A  L + M    +RP+ +T+  LLDG C  GR+ +A E F  + + G    V 
Sbjct: 420 KNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVR 479

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++ING CK   ++ AL+L S M   G   D V    +    F+  + ++A KL  EM
Sbjct: 480 TYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539

Query: 301 QRNGV 305
              G+
Sbjct: 540 IARGL 544


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  307 bits (786), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 159/438 (36%), Positives = 254/438 (57%), Gaps = 5/438 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +++  F ++ +ILK  + PD VT  +L++GLC   ++ EA      +       D  +Y 
Sbjct: 103 QLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYG 162

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NGLC++  T  AL L  ++     E  ++  P+ + YT IID  CK+  V  A +L 
Sbjct: 163 TLINGLCKSGETRAALQLLRKI-----EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLY 217

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  K I PNVVT+ S+I GFC      EA  L  EM    V PNV TFN+++D LCK 
Sbjct: 218 SEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKE 277

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++ +A+ +L +MI+ GV P+  TY +L+DG+ L   VN AK +F ++   G    V SY
Sbjct: 278 GEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSY 337

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S++ING CKNK ++ A+ L+ EM  K + P+ V +++L  GL +  ++   + L DE+  
Sbjct: 338 SVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINN 397

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G  A+  TY + ++GLCKN  + +A+ L   ++    + D+  Y +L+DGLCK+GRL+ 
Sbjct: 398 RGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKD 457

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  +++ L C     N+  Y++MI GLC +G  D+A  L   ME+N  +P+ +T++ LI 
Sbjct: 458 AQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLIS 517

Query: 423 GFIRINEPSKVIELLHKM 440
              + N+  K ++LL +M
Sbjct: 518 ALFKNNKNGKAVKLLREM 535



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 234/443 (52%), Gaps = 7/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  TF  LI       ++  A ++  K+   G +PD  T  TL+ GLC       ALN 
Sbjct: 86  PEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNF 145

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTS 139
            + +             + V+Y T+I+GLCK G    A +LL +++    ++P+V+ YT+
Sbjct: 146 HDHVIRKRFHL------DQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTA 199

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I  FC  K   +A  L+ EM+ + + PNVVTFN ++   C  G++ EA  LL+ M  + 
Sbjct: 200 IIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN 259

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V P+ +T+N L+DG C  G V  A  +   M   G +  V +Y+ L++GY   KE+  A 
Sbjct: 260 VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAK 319

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +++ +  +G+ P+V  ++ +  GL +   V+ A KLF EM    +  +T TY + IDGL
Sbjct: 320 HVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGL 379

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK+G I +  +L   +       +I  YNSL++GLCK+ +++ A+ L   +    + P++
Sbjct: 380 CKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDM 439

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+ ++ GLC +G++  A+ ++ D+       N+  + ++I G  +     + + LL +
Sbjct: 440 STYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQ 499

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M++   MPDA     ++  L KN
Sbjct: 500 MEDNGCMPDAVTYETLISALFKN 522



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 211/434 (48%), Gaps = 65/434 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFT 60
           G+V         +++  F  D V++ +LI GLC       A  L  K+  +    PDV  
Sbjct: 137 GKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIM 196

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM----------------------ANGNGEFGVVCE-- 96
           YT +++  C+    I A +L+ EM                             G++ E  
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                PN  T+  +IDGLCKEG V KA  +L  M  + ++PNVVTYTS++ G+   K+ N
Sbjct: 257 LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +AK +F  +  +GV PNV +++V+++ LCKN  +DEA +L   M    + P+  TY++L+
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLI 376

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG C +GR++   +L   + + G    + +Y+ L+NG CKN +++ A++L ++M  +GI+
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQ 436

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PD+                                  T+T  T +DGLCKNG + +A  +
Sbjct: 437 PDM---------------------------------STYT--TLVDGLCKNGRLKDAQRI 461

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           +  L       +IR Y  +I+GLCK G  + AL L   +     +P+ VTY  +I  L  
Sbjct: 462 YQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFK 521

Query: 392 DGQMDKARDLFLDM 405
           + +  KA  L  +M
Sbjct: 522 NNKNGKAVKLLREM 535



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 198/402 (49%), Gaps = 36/402 (8%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P    +  I+  L K      A     QM+ K I+P + T+  +I  F +    N A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+ VT N ++  LC NGK+ EA    D +I+     D  +Y TL++G C 
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 217 TGRVNHAKELFVSMES-MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           +G    A +L   +E  +  +  V  Y+ +I+ +CK+K +  A  LYSEM+ K I P+VV
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV------ 329
             N+L  G   + Q++ A  L +EM  N V  + +T+   IDGLCK G + +A       
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 330 -----------------------------ELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                                         +F+T+ +     ++ +Y+ +I+GLCK+  +
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A++LF+ +    + PN VTYS +I GLC  G++    DL  ++       N+IT++ L
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSL 410

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + G  + ++  K I LL KMK+  + PD S  + +VD L KN
Sbjct: 411 LNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKN 452



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 144/267 (53%), Gaps = 6/267 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     VL  ++K    P+ VT+TSL+ G      + +A  +F  + + G  P+V +Y
Sbjct: 278 GEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + ++NGLC+      A+ LF+EM   N        PNTVTY+++IDGLCK G +    +L
Sbjct: 338 SVMINGLCKNKMVDEAVKLFKEMHLKN------MTPNTVTYSSLIDGLCKSGRISDVWDL 391

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + ++ ++    N++TY S++ G C     ++A  L  +M D+G+QP++ T+  ++D LCK
Sbjct: 392 IDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCK 451

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++ +A R+   ++  G   +   Y  +++G C  G  + A  L   ME  GC     +
Sbjct: 452 NGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVT 511

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSK 268
           Y  LI+   KN +   A+ L  EM+++
Sbjct: 512 YETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 153/301 (50%), Gaps = 5/301 (1%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P +  FN I+  L K      A      M   G++P+ FT+N L++ F    ++N A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              +  +G +    + + L+ G C N +++ AL+ +  ++ K    D V + TL  GL +
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 287 IHQVERAFKLFDEMQRNG---VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
             +   A +L  +++  G   V  D   Y   ID  CK+  +++A +L+  + + K   +
Sbjct: 171 SGETRAALQLLRKIE--GLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPN 228

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  +NSLI G C  G+L+ A+ L   +    + PNV T++I+I GLC +G++ KA  +  
Sbjct: 229 VVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLS 288

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            M +  V PNV+T+  L+ G+  + E +K   + + +    V P+    S++++ L KN+
Sbjct: 289 VMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNK 348

Query: 464 I 464
           +
Sbjct: 349 M 349


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 162/458 (35%), Positives = 259/458 (56%), Gaps = 20/458 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS       +I K    P+ + FT+L+ GLC E R++EA AL  ++   G +P+  TY 
Sbjct: 161 RVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 216

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+V+G+C+   T+ ALNL  +M     E   + +PN V Y+ IIDGL K+G    A+ L 
Sbjct: 217 TIVDGMCKMGDTVSALNLLRKME----EVSRI-KPNVVIYSAIIDGLWKDGRQTDAQNLF 271

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M++K I PN+ TY  +I GFC +  W+EA+RL  EM ++ + P+VVTF+V+++ L K 
Sbjct: 272 SEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKE 331

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK  EA  L + M+  G+ P+  TYN+++DGF    R++ A+ +F  M + GC   V ++
Sbjct: 332 GKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITF 391

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           SILI+GYC  K ++  + L  EM  +G+  + + + TL  G  ++  +  A  L  EM  
Sbjct: 392 SILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMIS 451

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYNSLI 351
           +GV  +  T  T +DGLC NG + +A+E+F  ++  K            E D++ YN LI
Sbjct: 452 SGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILI 511

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GL   G+   A EL+  +P   LVP+ +TY+ +I GLC   ++D+A  +F  M      
Sbjct: 512 CGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFS 571

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           P+V+TF  LI G+ ++      +E+  +M    ++ +A
Sbjct: 572 PDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 221/442 (50%), Gaps = 11/442 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G +++S   P  + F  L+  +    R     +L  K+ +     +++++T L+   C
Sbjct: 63  LFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFC 122

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
             S    AL+ F ++     + G    P+ VT++T++ GLC E  V +A     Q+    
Sbjct: 123 SCSKLPFALSTFGKIT----KLGF--HPSLVTFSTLLHGLCVEDRVSEALHFFHQI---- 172

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            KPNV+ +T+++ G C      EA  L   M++ G+QPN +T+  I+D +CK G    A 
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 190 RLLDLMIQ-HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            LL  M +   ++P+   Y+ ++DG    GR   A+ LF  M+  G    +F+Y+ +ING
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           +C +     A  L  EM  + + PDVV  + L   L +  +   A +L++EM   G+  +
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPN 352

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T TY + IDG  K   +  A  +F+ +    C  D+  ++ LIDG C + R++  ++L  
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH 412

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    LV N +TY+ +I G C  G ++ A DL  +M  + V PNV+T + L+ G     
Sbjct: 413 EMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNG 472

Query: 429 EPSKVIELLHKMKEINVMPDAS 450
           +    +E+   M++  +  DAS
Sbjct: 473 KLKDALEMFKVMQKSKMDLDAS 494



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 175/375 (46%), Gaps = 52/375 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  + +   +PD VTF+ LI  L  E +  EA  L+ ++   G  P+  TY
Sbjct: 297 GRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITY 356

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G  + +    A  +F  MA         C P+ +T++ +IDG C    VD   +L
Sbjct: 357 NSMIDGFSKQNRLDAAERMFYLMATKG------CSPDVITFSILIDGYCGAKRVDDGMKL 410

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  + +  N +TYT++I GFC   + N A  L  EM+  GV PNVVT N ++D LC 
Sbjct: 411 LHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCN 470

Query: 182 NGKM----------------------------------------------DEASRLLDLM 195
           NGK+                                               EA  L + M
Sbjct: 471 NGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEM 530

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ PD  TYN+++DG C   R++ A ++F SM S G    V +++ LINGYCK   +
Sbjct: 531 PHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRV 590

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
              L ++ EM  +GI  + + + TL  G  ++  +  A  +F EM  +GV  DT T R  
Sbjct: 591 GDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNM 650

Query: 316 IDGLCKNGYIVEAVE 330
           + GL     +  AV+
Sbjct: 651 LTGLWSKEELKRAVQ 665



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 195/390 (50%), Gaps = 6/390 (1%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  ++T +I   C    +  A     ++      P++VT+++++ G C     +EA   F
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
                Q  +PNV+ F  +M+ LC+ G++ EA  LLD M++ G++P+  TY T++DG C  
Sbjct: 170 ----HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225

Query: 218 GRVNHAKELFVSMESMG-CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           G    A  L   ME +   K  V  YS +I+G  K+     A +L+SEM  KGI P++  
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N +  G     +   A +L  EM    ++ D  T+   I+ L K G   EA EL++ + 
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEML 345

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 +   YNS+IDG  K  RL+ A  +F  +      P+V+T+SI+I G C   ++D
Sbjct: 346 PRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVD 405

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
               L  +M    +V N IT+  LI GF ++   +  ++LL +M    V P+    + ++
Sbjct: 406 DGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLL 465

Query: 457 DLLAKNEISLNSLPSFTVHEQQE-EVDESN 485
           D L  N    ++L  F V ++ + ++D S+
Sbjct: 466 DGLCNNGKLKDALEMFKVMQKSKMDLDASH 495



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 158/321 (49%), Gaps = 5/321 (1%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF   K  ++A  LF  M+     P V+ F  ++  + +  + D    L   M    +  
Sbjct: 50  GFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPC 109

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           + +++  L+  FC   ++  A   F  +  +G   ++ ++S L++G C    +  AL  +
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            ++     KP+V+   TL  GL    +V  A  L D M  +G+  +  TY T +DG+CK 
Sbjct: 170 HQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225

Query: 323 GYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           G  V A+ L   +  + + + ++  Y+++IDGL K GR   A  LF  +    + PN+ T
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ MI G C+ G+  +A+ L  +M E  + P+V+TF +LI   ++  +  +  EL ++M 
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEML 345

Query: 442 EINVMPDASIVSIVVDLLAKN 462
              ++P+    + ++D  +K 
Sbjct: 346 PRGIIPNTITYNSMIDGFSKQ 366


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 169/477 (35%), Positives = 264/477 (55%), Gaps = 25/477 (5%)

Query: 3   RVSHGFVVLGRILKSCF---------------TPDAVTFTSLIKGLCAESRIMEAAALFT 47
           R+S    + G ++++ F               TP  +TF +LI GLC E R++EAAAL  
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250

Query: 48  KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIID 107
           K+   G   DV TY T+VNG+C+   T  ALNL  +M   +       +P+ V Y+ IID
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDVVIYSAIID 304

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            LCK+G    A+ L  +M +K I PNV TY  +I GFC    W++A+RL  +M+++ + P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           +V+TFN ++    K GK+ EA +L D M+   + PD  TYN+++ GFC   R + AK +F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M S      V +++ +I+ YC+ K ++  + L  E+  +G+  +   +NTL  G  E+
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             +  A  LF EM  +GV  DT T    + G C+N  + EA+ELF  +++ K + D  AY
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N +I G+CK  +++ A +LF SLP   + P+V TY++MI G C    +  A  LF  M++
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           N   P+  T++ LIRG ++  E  K IEL+ +M+      DA  + +V DL+    +
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRL 657



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 212/419 (50%), Gaps = 10/419 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     ++ +++      D VT+ +++ G+C       A  L +K+     +PDV  Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + +++ LC+  H   A  LF EM     E G+   PN  TY  +IDG C  G    A+ L
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEML----EKGIA--PNVFTYNCMIDGFCSFGRWSDAQRL 353

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M ++ I P+V+T+ ++I          EA++L  EM+ + + P+ VT+N ++   CK
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + + D+A  + DLM      PD  T+NT++D +C   RV+   +L   +   G      +
Sbjct: 414 HNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+C+   +  A  L+ EM+S G+ PD +  N L  G  E  ++E A +LF+ +Q
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            + +  DT  Y   I G+CK   + EA +LF +L I   E D++ YN +I G C    + 
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A  LF  +      P+  TY+ +I G    G++DK+ +L  +M  N    +  T  M+
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 210/405 (51%), Gaps = 14/405 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG       +L ++ ++   PD V ++++I  LC +    +A  LF+++   G  P+VFT
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++G C       A  L  +M            P+ +T+  +I    KEG + +A++
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVLTFNALISASVKEGKLFEAEK 387

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P+ VTY S+I GFC    +++AK +F    D    P+VVTFN I+D  C
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYC 443

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  ++DE  +LL  + + G+  +  TYNTL+ GFC    +N A++LF  M S G      
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +IL+ G+C+N+++E AL L+  +    I  D V +N +  G+ +  +V+ A+ LF  +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +GV  D  TY   I G C    I +A  LFH ++    E D   YN+LI G  K+G +
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           + ++EL   +       +  T   M+  L  DG++DK+   F DM
Sbjct: 624 DKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 664



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 222/465 (47%), Gaps = 33/465 (7%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           +F  LIK  C   ++  + + F KL   G +PDV T+ TL++GLC       AL LF  M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                                     + GF++ A  L  QM +  + P V+T+ ++I G 
Sbjct: 203 V-------------------------ETGFLE-AVALFDQMVEIGLTPVVITFNTLINGL 236

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C      EA  L  +M+ +G+  +VVT+  I++ +CK G    A  LL  M +  ++PD 
Sbjct: 237 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 296

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             Y+ ++D  C  G  + A+ LF  M   G    VF+Y+ +I+G+C       A  L  +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+ + I PDV+  N L     +  ++  A KL DEM    +  DT TY + I G CK+  
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
             +A  +F     L    D+  +N++ID  C++ R++  ++L R +    LV N  TY+ 
Sbjct: 417 FDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I G C    ++ A+DLF +M  + V P+ IT ++L+ GF    +  + +EL   ++   
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 445 VMPDASIVSIVVDLLAKN---EISLNSLPSFTVHEQQEEVDESNV 486
           +  D    +I++  + K    + + +   S  +H  + +V   NV
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 19/356 (5%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  L  +M+ + I  N+ ++  +I+ FC     + +   F ++   G QP+VVTFN +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 176 MDELCKNGKMDEA---------------SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +  LC   ++ EA                 L D M++ G+ P   T+NTL++G CL GRV
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A  L   M   G    V +Y  ++NG CK  + + AL+L S+M    IKPDVVI++ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +      A  LF EM   G+A + +TY   IDG C  G   +A  L   +   + 
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  +N+LI    K G+L  A +L   +    + P+ VTY+ MI G C   + D A+ 
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +F  M      P+V+TF+ +I  + R     + ++LL ++    ++ + +  + ++
Sbjct: 423 MFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 15/279 (5%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    D M++      A   N ++  F    R + A  L+  ME       ++S++I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF---------- 294
           LI  +C   ++  +LS + ++   G +PDVV  NTL  GL    ++  A           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 295 -----KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
                 LFD+M   G+     T+ T I+GLC  G ++EA  L + +       D+  Y +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +++G+CK G  + AL L   +    + P+VV YS +I  LC DG    A+ LF +M E  
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           + PNV T++ +I GF      S    LL  M E  + PD
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 165/446 (36%), Positives = 254/446 (56%), Gaps = 10/446 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            TP  +TF +LI GLC E R++EAAAL  K+   G   DV TY T+VNG+C+   T  AL
Sbjct: 6   LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           NL  +M   +       +P+ V Y+ IID LCK+G    A+ L  +M +K I PNV TY 
Sbjct: 66  NLLSKMEETH------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 119

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I GFC    W++A+RL  +M+++ + P+V+TFN ++    K GK+ EA +L D M+  
Sbjct: 120 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 179

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            + PD  TYN+++ GFC   R + AK +F  M S      V +++ +I+ YC+ K ++  
Sbjct: 180 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEG 235

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           + L  E+  +G+  +   +NTL  G  E+  +  A  LF EM  +GV  DT T    + G
Sbjct: 236 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 295

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+N  + EA+ELF  +++ K + D  AYN +I G+CK  +++ A +LF SLP   + P+
Sbjct: 296 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 355

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V TY++MI G C    +  A  LF  M++N   P+  T++ LIRG ++  E  K IEL+ 
Sbjct: 356 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 415

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEI 464
           +M+      DA  + +V DL+    +
Sbjct: 416 EMRSNGFSGDAFTIKMVADLITDGRL 441



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 212/419 (50%), Gaps = 10/419 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     ++ +++      D VT+ +++ G+C       A  L +K+     +PDV  Y
Sbjct: 24  GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 83

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + +++ LC+  H   A  LF EM     E G+   PN  TY  +IDG C  G    A+ L
Sbjct: 84  SAIIDRLCKDGHHSDAQYLFSEML----EKGIA--PNVFTYNCMIDGFCSFGRWSDAQRL 137

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M ++ I P+V+T+ ++I          EA++L  EM+ + + P+ VT+N ++   CK
Sbjct: 138 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 197

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + + D+A  + DLM      PD  T+NT++D +C   RV+   +L   +   G      +
Sbjct: 198 HNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 253

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+C+   +  A  L+ EM+S G+ PD +  N L  G  E  ++E A +LF+ +Q
Sbjct: 254 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 313

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            + +  DT  Y   I G+CK   + EA +LF +L I   E D++ YN +I G C    + 
Sbjct: 314 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 373

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A  LF  +      P+  TY+ +I G    G++DK+ +L  +M  N    +  T  M+
Sbjct: 374 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 432



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 210/405 (51%), Gaps = 14/405 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG       +L ++ ++   PD V ++++I  LC +    +A  LF+++   G  P+VFT
Sbjct: 58  MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 117

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++G C       A  L  +M            P+ +T+  +I    KEG + +A++
Sbjct: 118 YNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVLTFNALISASVKEGKLFEAEK 171

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P+ VTY S+I GFC    +++AK +F    D    P+VVTFN I+D  C
Sbjct: 172 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYC 227

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  ++DE  +LL  + + G+  +  TYNTL+ GFC    +N A++LF  M S G      
Sbjct: 228 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 287

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +IL+ G+C+N+++E AL L+  +    I  D V +N +  G+ +  +V+ A+ LF  +
Sbjct: 288 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 347

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +GV  D  TY   I G C    I +A  LFH ++    E D   YN+LI G  K+G +
Sbjct: 348 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 407

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           + ++EL   +       +  T   M+  L  DG++DK+   F DM
Sbjct: 408 DKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 448



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 182/365 (49%), Gaps = 7/365 (1%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M +  + P V+T+ ++I G C      EA  L  +M+ +G+  +VVT+  I++ +CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
              A  LL  M +  ++PD   Y+ ++D  C  G  + A+ LF  M   G    VF+Y+ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+G+C       A  L  +M+ + I PDV+  N L     +  ++  A KL DEM    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  DT TY + I G CK+    +A  +F     L    D+  +N++ID  C++ R++  +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +L R +    LV N  TY+ +I G C    ++ A+DLF +M  + V P+ IT ++L+ GF
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN---EISLNSLPSFTVHEQQEEV 481
               +  + +EL   ++   +  D    +I++  + K    + + +   S  +H  + +V
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 482 DESNV 486
              NV
Sbjct: 357 QTYNV 361


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 165/446 (36%), Positives = 254/446 (56%), Gaps = 10/446 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            TP  +TF +LI GLC E R++EAAAL  K+   G   DV TY T+VNG+C+   T  AL
Sbjct: 217 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 276

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           NL  +M   +       +P+ V Y+ IID LCK+G    A+ L  +M +K I PNV TY 
Sbjct: 277 NLLSKMEETH------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 330

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I GFC    W++A+RL  +M+++ + P+V+TFN ++    K GK+ EA +L D M+  
Sbjct: 331 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 390

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            + PD  TYN+++ GFC   R + AK +F  M S      V +++ +I+ YC+ K ++  
Sbjct: 391 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEG 446

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           + L  E+  +G+  +   +NTL  G  E+  +  A  LF EM  +GV  DT T    + G
Sbjct: 447 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 506

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+N  + EA+ELF  +++ K + D  AYN +I G+CK  +++ A +LF SLP   + P+
Sbjct: 507 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 566

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V TY++MI G C    +  A  LF  M++N   P+  T++ LIRG ++  E  K IEL+ 
Sbjct: 567 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 626

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEI 464
           +M+      DA  + +V DL+    +
Sbjct: 627 EMRSNGFSGDAFTIKMVADLITDGRL 652



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 212/419 (50%), Gaps = 10/419 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     ++ +++      D VT+ +++ G+C       A  L +K+     +PDV  Y
Sbjct: 235 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 294

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + +++ LC+  H   A  LF EM     E G+   PN  TY  +IDG C  G    A+ L
Sbjct: 295 SAIIDRLCKDGHHSDAQYLFSEML----EKGIA--PNVFTYNCMIDGFCSFGRWSDAQRL 348

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M ++ I P+V+T+ ++I          EA++L  EM+ + + P+ VT+N ++   CK
Sbjct: 349 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 408

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + + D+A  + DLM      PD  T+NT++D +C   RV+   +L   +   G      +
Sbjct: 409 HNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 464

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+C+   +  A  L+ EM+S G+ PD +  N L  G  E  ++E A +LF+ +Q
Sbjct: 465 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 524

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            + +  DT  Y   I G+CK   + EA +LF +L I   E D++ YN +I G C    + 
Sbjct: 525 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 584

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A  LF  +      P+  TY+ +I G    G++DK+ +L  +M  N    +  T  M+
Sbjct: 585 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 643



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 210/405 (51%), Gaps = 14/405 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG       +L ++ ++   PD V ++++I  LC +    +A  LF+++   G  P+VFT
Sbjct: 269 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 328

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++G C       A  L  +M            P+ +T+  +I    KEG + +A++
Sbjct: 329 YNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVLTFNALISASVKEGKLFEAEK 382

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P+ VTY S+I GFC    +++AK +F    D    P+VVTFN I+D  C
Sbjct: 383 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYC 438

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  ++DE  +LL  + + G+  +  TYNTL+ GFC    +N A++LF  M S G      
Sbjct: 439 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 498

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +IL+ G+C+N+++E AL L+  +    I  D V +N +  G+ +  +V+ A+ LF  +
Sbjct: 499 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 558

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +GV  D  TY   I G C    I +A  LFH ++    E D   YN+LI G  K+G +
Sbjct: 559 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 618

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           + ++EL   +       +  T   M+  L  DG++DK+   F DM
Sbjct: 619 DKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 659



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 224/458 (48%), Gaps = 23/458 (5%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A +L+ K+ +     +++++  L+   C       +L+ F ++     + G   +P+ VT
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT----KLGF--QPDVVT 178

Query: 102 YTTIIDGLCKE----------GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
           + T++ GLC E          G++ +   L  QM +  + P V+T+ ++I G C      
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVL 238

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           EA  L  +M+ +G+  +VVT+  I++ +CK G    A  LL  M +  ++PD   Y+ ++
Sbjct: 239 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 298

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           D  C  G  + A+ LF  M   G    VF+Y+ +I+G+C       A  L  +M+ + I 
Sbjct: 299 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 358

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PDV+  N L     +  ++  A KL DEM    +  DT TY + I G CK+    +A  +
Sbjct: 359 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 418

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F     L    D+  +N++ID  C++ R++  ++L R +    LV N  TY+ +I G C 
Sbjct: 419 FD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 474

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
              ++ A+DLF +M  + V P+ IT ++L+ GF    +  + +EL   ++   +  D   
Sbjct: 475 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 534

Query: 452 VSIVVDLLAKN---EISLNSLPSFTVHEQQEEVDESNV 486
            +I++  + K    + + +   S  +H  + +V   NV
Sbjct: 535 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 572



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 174/351 (49%), Gaps = 14/351 (3%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  L  +M+ + I  N+ ++  +I+ FC     + +   F ++   G QP+VVTFN +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 176 MDELCKNGKMDEA----------SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +  LC   ++ EA            L D M++ G+ P   T+NTL++G CL GRV  A  
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 242

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M   G    V +Y  ++NG CK  + + AL+L S+M    IKPDVVI++ +   L 
Sbjct: 243 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 302

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +      A  LF EM   G+A + +TY   IDG C  G   +A  L   +   +   D+ 
Sbjct: 303 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 362

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            +N+LI    K G+L  A +L   +    + P+ VTY+ MI G C   + D A+ +F  M
Sbjct: 363 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 422

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
                 P+V+TF+ +I  + R     + ++LL ++    ++ + +  + ++
Sbjct: 423 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 469



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    D M++      A   N ++  F    R + A  L+  ME       ++S++I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF---------- 294
           LI  +C   ++  +LS + ++   G +PDVV  NTL  GL    ++  A           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            LFD+M   G+     T+ T I+GLC  G ++EA  L + +       D+  Y ++++G+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK G  + AL L   +    + P+VV YS +I  LC DG    A+ LF +M E  + PNV
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            T++ +I GF      S    LL  M E  + PD
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 360



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 10/317 (3%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G  Y K  ++A   F  M+        V  N ++    +  + D A  L   M    +  
Sbjct: 80  GSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL--- 259
           + +++N L+  FC   +++ +   F  +  +G +  V +++ L++G C    I  AL   
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 260 -------SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
                  SL+ +M+  G+ P V+  NTL  GL    +V  A  L ++M   G+  D  TY
Sbjct: 200 GYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 259

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T ++G+CK G    A+ L   +     + D+  Y+++ID LCK G    A  LF  +  
Sbjct: 260 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 319

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + PNV TY+ MI G C+ G+   A+ L  DM E  + P+V+TF+ LI   ++  +  +
Sbjct: 320 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 379

Query: 433 VIELLHKMKEINVMPDA 449
             +L  +M    + PD 
Sbjct: 380 AEKLCDEMLHRCIFPDT 396


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 164/440 (37%), Positives = 249/440 (56%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G  S  F +  +ILK  + P A+TF +LIKGLC +  I +A     K+   G   D  +
Sbjct: 109 LGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVS 168

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+      AL L + +       G + +PN V Y  IID +CK   V+ A +
Sbjct: 169 YGTLINGLCKVGRITAALQLLKRVD------GKLVQPNAVMYNMIIDNMCKAKLVNDAFD 222

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  QM  K I P+V TY ++I GF      N A  LF +M  + + PNV TFN+++D  C
Sbjct: 223 LYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFC 282

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+++A  +L +M++  ++PD  TYN+L+DG+C   +VN AK++F SM S G    V 
Sbjct: 283 KEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQ 342

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ ++NG+CK K ++ A++L+ EM  + I P+VV +++L  GL ++ ++  A KL DEM
Sbjct: 343 IYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEM 402

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   +  TY + +D LCKN ++ +A+ L   L+      D+  Y  LI GLC+SGRL
Sbjct: 403 HDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRL 462

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A  +F  L       +V  Y++MI G C+ G  DKA  L   ME+N  +PN  T++++
Sbjct: 463 EDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELV 522

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I      +E     +LL +M
Sbjct: 523 ILSLFEKDENDTAEKLLREM 542



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 234/443 (52%), Gaps = 7/443 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  TF  LI           + ++F K+   G  P   T+ TL+ GLC   H   AL+  
Sbjct: 95  DFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFH 154

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +++             + V+Y T+I+GLCK G +  A +LL ++  K ++PN V Y  +I
Sbjct: 155 DKVVAQGFHL------DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMII 208

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C AK  N+A  L+ +M+ + + P+V T+N ++       K++ A  L + M +  + 
Sbjct: 209 DNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENIN 268

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+ +T+N L+DGFC  G+VN AK +   M     K  V +Y+ L++GYC   ++  A  +
Sbjct: 269 PNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDI 328

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M S G+  +V I+ T+  G  +I  V+ A  LF+EM+   +  +  TY + IDGLCK
Sbjct: 329 FDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCK 388

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G I  A++L   +       +I  Y+S++D LCK+  ++ A+ L  +L    + P++ T
Sbjct: 389 LGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT 448

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+I+I GLC  G+++ A+++F D+       +V  + ++I+GF       K + LL KM+
Sbjct: 449 YTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKME 508

Query: 442 EINVMPDASIVSIVV-DLLAKNE 463
           +   +P+A    +V+  L  K+E
Sbjct: 509 DNGCIPNAKTYELVILSLFEKDE 531



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 169/305 (55%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + ++++   +  ++ K    P+  TF  L+ G C E ++ +A  +   +     +PDV T
Sbjct: 249 VSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVT 308

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G C  +    A ++F+ MA+G    GV+   N   YTT+++G CK   VD+A  
Sbjct: 309 YNSLMDGYCSINKVNKAKDIFDSMASG----GVIA--NVQIYTTMVNGFCKIKMVDEAIN 362

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M+ + I PNVVTY+S+I G C       A +L  EM D+G  PN+VT++ I+D LC
Sbjct: 363 LFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALC 422

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN  +D+A  LL  +   G+RPD +TY  L+ G C +GR+  A+ +F  +   G    V+
Sbjct: 423 KNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVY 482

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I G+C     + AL+L S+M   G  P+   +  + + LFE  + + A KL  EM
Sbjct: 483 AYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542

Query: 301 QRNGV 305
              G+
Sbjct: 543 IVRGL 547



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 204/419 (48%), Gaps = 46/419 (10%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           P  F +  +++ L +  H   AL+L ++M  NG        E +  T+  +I+   + G 
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNG-------IESDFFTFNILINCFSQLGL 111

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
              +  +  ++  K   P  +T+ ++I+G C     ++A     +++ QG   + V++  
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++ LCK G++  A +LL  +    V+P+A  YN ++D  C    VN A +L+  M +  
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 235 CKHTVFSYSILI-----------------------------------NGYCKNKEIEGAL 259
               VF+Y+ LI                                   +G+CK  ++  A 
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + + M+   IKPDVV +N+L  G   I++V +A  +FD M   GV A+   Y T ++G 
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   + EA+ LF  +R  K   ++  Y+SLIDGLCK GR+  AL+L   +      PN+
Sbjct: 352 CKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNI 411

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIE 435
           VTYS ++  LC +  +DKA  L  ++++  + P++ T+ +LI+G     R+ +   V E
Sbjct: 412 VTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFE 470



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 172/371 (46%), Gaps = 35/371 (9%)

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           KN  P    +  ++     AK  + A  L  +M   G++ +  TFN++++   + G    
Sbjct: 55  KNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSL 114

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           +  +   +++ G  P A T+NTL+ G CL G ++ A      + + G      SY  LIN
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174

Query: 248 GYCKNKEIEGALS-----------------------------------LYSEMLSKGIKP 272
           G CK   I  AL                                    LYS+M++K I P
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           DV  +N L  G   + ++  A  LF++M++  +  + +T+   +DG CK G + +A  + 
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +     + D+  YNSL+DG C   ++  A ++F S+  G ++ NV  Y+ M+ G C  
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKI 354

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
             +D+A +LF +M    ++PNV+T+  LI G  ++      ++L+ +M +    P+    
Sbjct: 355 KMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTY 414

Query: 453 SIVVDLLAKNE 463
           S ++D L KN 
Sbjct: 415 SSILDALCKNH 425



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 149/302 (49%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           ++ +   P    FN I+  L K      A  L   M  +G+  D FT+N L++ F   G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
            + +  +F  +   G   T  +++ LI G C    I  AL  + +++++G   D V + T
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  GL ++ ++  A +L   +    V  +   Y   ID +CK   + +A +L+  +   +
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D+  YN+LI G     +L  A++LF  +    + PNV T++I++ G C +G+++ A+
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +   M ++ + P+V+T++ L+ G+  IN+ +K  ++   M    V+ +  I + +V+  
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351

Query: 460 AK 461
            K
Sbjct: 352 CK 353



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/156 (19%), Positives = 71/156 (45%)

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T+ +   +  L K  +   A+ L   + +   E D   +N LI+   + G   ++  +F 
Sbjct: 61  TFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFA 120

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +      P  +T++ +I GLC  G + +A      +       + +++  LI G  ++ 
Sbjct: 121 KILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVG 180

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             +  ++LL ++    V P+A + ++++D + K ++
Sbjct: 181 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKL 216


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 166/457 (36%), Positives = 252/457 (55%), Gaps = 5/457 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           GF VLG + K    P  VTF +LI GLCAE  +  AA     L   G + + +TY  ++N
Sbjct: 125 GFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIIN 184

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GLC+   T  A+   E++   N +  VV     + Y+TI+D LCK+G V +A  L   M 
Sbjct: 185 GLCKAGDTSGAILYLEKIKGRNCDLDVV-----IAYSTIMDSLCKDGMVCEALNLFSGMT 239

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            K I+P++V Y S+I G C    W EA  L   MM +G+ PNV TFNV++D  CK+G + 
Sbjct: 240 SKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMIS 299

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  ++  M+  GV PD  TYN+++ G CL  ++  A ++F  M   G    + +YS LI
Sbjct: 300 RAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLI 359

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G+CK K I  AL L  EM++ G+ PDVV  +TL  G  +  + E A +LF  M  +   
Sbjct: 360 HGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQH 419

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  T    +DGL K  +  EA+ LF  +  +  E ++  YN ++DG+C  G+L  A EL
Sbjct: 420 PNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQEL 479

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  LP   +  +VV Y+ MI GLC +G +D A +L + MEEN  +PN  T+++ +RG ++
Sbjct: 480 FSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQ 539

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             + S+  + L  MK   +  DA+   +++   + N+
Sbjct: 540 RYDISRSTKYLLLMKGKGLSADATTTELLISYFSANK 576



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 1/382 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P    +T +   + K         L+  +    IKP+V T T +I   C+         +
Sbjct: 69  PREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSV 128

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M   GV P VVTF  +++ LC  G +  A+R  D +   G + +++TY  +++G C 
Sbjct: 129 LGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCK 188

Query: 217 TGRVNHAKELFVSMESMGCK-HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            G  + A      ++   C    V +YS +++  CK+  +  AL+L+S M SKGI+PD+V
Sbjct: 189 AGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLV 248

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N+L  GL    + + A  L   M R G+  +  T+   +D  CK+G I  A  +   +
Sbjct: 249 AYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFM 308

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
             +  E D+  YNS+I G C   ++  A+++F  +     +PN+VTYS +I G C    +
Sbjct: 309 VHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNI 368

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           +KA  L  +M  + + P+V+T+  LI GF +  +P    EL   M E +  P+    +I+
Sbjct: 369 NKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAII 428

Query: 456 VDLLAKNEISLNSLPSFTVHEQ 477
           +D L K +    ++  F   E+
Sbjct: 429 LDGLFKCQFHSEAISLFREMEK 450



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 161/321 (50%), Gaps = 6/321 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +LG +++    P+  TF  L+   C +  I  A  +   +   G EPDV TY
Sbjct: 261 GRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTY 320

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C  S    A+ +FE M +     G +  PN VTY+++I G CK   ++KA  L
Sbjct: 321 NSVISGHCLLSQMGDAVKVFELMIHK----GFL--PNLVTYSSLIHGWCKTKNINKALFL 374

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  + P+VVT++++I GFC A     AK LF  M +    PN+ T  +I+D L K
Sbjct: 375 LGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFK 434

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
                EA  L   M +  +  +   YN +LDG C  G++N A+ELF  + S G K  V +
Sbjct: 435 CQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVA 494

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I G CK   ++ A +L  +M   G  P+   +N    GL + + + R+ K    M+
Sbjct: 495 YTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMK 554

Query: 302 RNGVAADTWTYRTFIDGLCKN 322
             G++AD  T    I     N
Sbjct: 555 GKGLSADATTTELLISYFSAN 575



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 150/296 (50%), Gaps = 7/296 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S    ++G ++     PD VT+ S+I G C  S++ +A  +F  +   G  P++ TY
Sbjct: 296 GMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTY 355

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++G C+T +   AL L  EM N          P+ VT++T+I G CK G  + AKEL
Sbjct: 356 SSLIHGWCKTKNINKALFLLGEMVNSG------LNPDVVTWSTLIGGFCKAGKPEAAKEL 409

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M + +  PN+ T   ++ G    +  +EA  LF EM    ++ NVV +N+++D +C 
Sbjct: 410 FCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCS 469

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++A  L   +   G++ D   Y T++ G C  G ++ A+ L + ME  GC    F+
Sbjct: 470 FGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFT 529

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           Y++ + G  +  +I  +      M  KG+  D      L +  F  ++   A  +F
Sbjct: 530 YNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATT-TELLISYFSANKENSALHVF 584



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/261 (20%), Positives = 97/261 (37%), Gaps = 38/261 (14%)

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           K  E ALS + +M+     P       LF  + ++        L   +   G+  D +T 
Sbjct: 50  KSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTL 109

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL-- 370
              I+ LC   + V    +   +  +  +  +  + +LI+GLC  G +  A     SL  
Sbjct: 110 TIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLED 169

Query: 371 --------PCGVLVPN--------------------------VVTYSIMIGGLCNDGQMD 396
                     G ++                            V+ YS ++  LC DG + 
Sbjct: 170 MGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVC 229

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A +LF  M    + P+++ ++ LI G        +   LL  M    +MP+    +++V
Sbjct: 230 EALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLV 289

Query: 457 DLLAKNEI--SLNSLPSFTVH 475
           D   K+ +     ++  F VH
Sbjct: 290 DNFCKDGMISRAKTIMGFMVH 310


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 166/457 (36%), Positives = 252/457 (55%), Gaps = 5/457 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           GF VLG + K    P  VTF +LI GLCAE  +  AA     L   G E + +T+ T++N
Sbjct: 61  GFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIIN 120

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GLC+   T  A++  E++   N  F ++     + Y+TI+D LCK+G +  A      M 
Sbjct: 121 GLCKVGDTAGAISYLEKIEGRNRGFDLL-----IAYSTIMDSLCKDGMLCLALNFFSGMT 175

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            K I+P++V Y S+I G C    WNEA  L   MM +G+ PNV TFNV++D  CK GK+ 
Sbjct: 176 CKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKIS 235

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  ++  M+  GV PD  TYN+++ G CL  ++N A ++F  M   G    V +YS LI
Sbjct: 236 RAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLI 295

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G+CK + I  A+ +  EM++ G+  DVV  +TL  G  +  + E A +LF  M  +   
Sbjct: 296 HGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQL 355

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  T    +DGL K  +  EA+ LF  +  +  E +I  YN ++DG+C  G+   A EL
Sbjct: 356 PNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDAREL 415

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  LP   +  +VV Y+ MI GLC +G +D A DL + MEEN   PN  T+++L+RG ++
Sbjct: 416 FSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQ 475

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             + S+  + L  MK   +  DA+   +++   + N+
Sbjct: 476 RYDISRSTKYLMLMKGKGLSADATTTELLISYFSANK 512



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 183/382 (47%), Gaps = 1/382 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P    + T+   + K      A  L+       +KP+V T T VI   C+ K       +
Sbjct: 5   PPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSV 64

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M   GV+P VVTF  +++ LC  G +  A+R  D +   G   +++T+ T+++G C 
Sbjct: 65  LGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCK 124

Query: 217 TGRVNHAKELFVSMESMGCKHTVF-SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            G    A      +E       +  +YS +++  CK+  +  AL+ +S M  KGI+PD+V
Sbjct: 125 VGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLV 184

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N+L  GL    +   A  L   M R G+  +  T+   +D  CK G I  A  +   +
Sbjct: 185 AYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFM 244

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
             +  E D+  YNS+I G C   ++  A+++F  +    L+PNVVTYS +I G C    +
Sbjct: 245 VHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNI 304

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           +KA  +  +M  N +  +V+T+  LI GF +   P   IEL   M E + +P+    +I+
Sbjct: 305 NKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAII 364

Query: 456 VDLLAKNEISLNSLPSFTVHEQ 477
           +D L K +    ++  F   E+
Sbjct: 365 LDGLFKCQFHSEAISLFRKMEK 386



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 6/321 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR +    +LG +++    P+  TF  L+   C E +I  A  +   +   G EPDV TY
Sbjct: 197 GRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTY 256

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C  S    A+ +FE M +     G++  PN VTY+++I G CK   ++KA  +
Sbjct: 257 NSVISGHCLLSQMNDAVKVFELMIHK----GLL--PNVVTYSSLIHGWCKTRNINKAIFV 310

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  +  +VVT++++I GFC A     A  LF  M +    PN+ T  +I+D L K
Sbjct: 311 LDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFK 370

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
                EA  L   M +  +  +  TYN +LDG C  G+ N A+ELF  + S G +  V +
Sbjct: 371 CQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVA 430

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I G CK   ++ A  L  +M   G  P+   +N L  GL + + + R+ K    M+
Sbjct: 431 YTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMK 490

Query: 302 RNGVAADTWTYRTFIDGLCKN 322
             G++AD  T    I     N
Sbjct: 491 GKGLSADATTTELLISYFSAN 511



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 152/296 (51%), Gaps = 7/296 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    ++  ++     PD VT+ S+I G C  S++ +A  +F  +   G  P+V TY
Sbjct: 232 GKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTY 291

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++G C+T +   A+ + +EM N      V      VT++T+I G CK G  + A EL
Sbjct: 292 SSLIHGWCKTRNINKAIFVLDEMVNNGLNLDV------VTWSTLIGGFCKAGRPEAAIEL 345

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M + +  PN+ T   ++ G    +  +EA  LF +M    ++ N+VT+N+++D +C 
Sbjct: 346 FCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCS 405

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK ++A  L   +   G++ D   Y T++ G C  G ++ A++L + ME  GC    F+
Sbjct: 406 FGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFT 465

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           Y++L+ G  +  +I  +      M  KG+  D      L +  F  ++   A ++F
Sbjct: 466 YNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATT-TELLISYFSANKENSALQVF 520


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 167/445 (37%), Positives = 253/445 (56%), Gaps = 8/445 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFTYTTLVNGLCRTSHTIVA 77
           + P+A+T+ +++ GLC+  ++  A  LF ++   G C PDVFTY+T+V+ L ++     A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
             L E M +        C PN VTY++++ GLCK G +D+A  LL +M      PN+VTY
Sbjct: 240 CRLVEAMVSKG------CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 293

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            ++I G C     +EA  L  EM+D G QPNVVT+ V++D  CK GK ++A  L+++M++
Sbjct: 294 NTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 353

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G  P+ FTYN+LLD FC    V  A +L  SM   GC   V SY+ +I G CK  ++  
Sbjct: 354 KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 413

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
            + L  +MLS    PD+V  NT+   + + ++V+ A++LF+ +Q +G   +  TY + + 
Sbjct: 414 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 473

Query: 318 GLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           GLCK+    +A  L   + R   C  DI  YN++IDGLCKS R++ A +LF  +    L 
Sbjct: 474 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 533

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+ VTYSI+I  LC    MD+A ++   M +N   P  IT+  LI GF +     K +E+
Sbjct: 534 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 593

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
           L  +      PD    SI +D L+K
Sbjct: 594 LQLLLSKGSYPDVVTFSIFIDWLSK 618



 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 159/458 (34%), Positives = 257/458 (56%), Gaps = 11/458 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     ++  ++    +P+ VT++SL+ GLC   ++ EA AL  ++   GC P++ TY
Sbjct: 234 GKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 293

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G C+      A +L EEM +G       C+PN VTYT ++D  CK G  + A  L
Sbjct: 294 NTIIDGHCKLGRIDEAYHLLEEMVDGG------CQPNVVTYTVLLDAFCKCGKAEDAIGL 347

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M +K   PN+ TY S++  FC   +   A +L   M+ +G  PNVV++N ++  LCK
Sbjct: 348 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 407

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+ E   LL+ M+ +   PD  T+NT++D  C T RV+ A ELF  ++  GC   + +
Sbjct: 408 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 467

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           Y+ L++G CK++  + A  L  EM  K G  PD++ +NT+  GL +  +V+RA+KLF +M
Sbjct: 468 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA--YNSLIDGLCKSG 358
             +G+A D  TY   I  LCK  ++ EA  +   +  LK  FD  A  Y +LIDG CK+G
Sbjct: 528 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM--LKNGFDPGAITYGTLIDGFCKTG 585

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            L+ ALE+ + L      P+VVT+SI I  L   G++ +A +L   M    +VP+ +T++
Sbjct: 586 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYN 645

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            L++GF   +     ++L   M++    PD +  + +V
Sbjct: 646 TLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  280 bits (717), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 166/479 (34%), Positives = 250/479 (52%), Gaps = 50/479 (10%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV +   +L +++     PD V++T++I GLC   ++ EA  +  K+   GC+P+V TY 
Sbjct: 94  RVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 153

Query: 63  TLVNGLCR------------------------TSHTIV-----------ALNLFEEMANG 87
           TLV+G CR                        T + I+           AL LF+EM   
Sbjct: 154 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEES 213

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                  C P+  TY+TI+D L K G VD A  L+  M  K   PNVVTY+S++ G C A
Sbjct: 214 GS-----CPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKA 268

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
              +EA  L   M   G  PN+VT+N I+D  CK G++DEA  LL+ M+  G +P+  TY
Sbjct: 269 GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 328

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             LLD FC  G+   A  L   M   G    +F+Y+ L++ +CK  E+E A  L S M+ 
Sbjct: 329 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 388

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           KG  P+VV +NT+  GL +  +V     L ++M  N    D  T+ T ID +CK   +  
Sbjct: 389 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 448

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVLVPNVVTYS 383
           A ELF+ ++   C  ++  YNSL+ GLCKS R + A  L R +     C    P+++TY+
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCS---PDIITYN 505

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR---INEPSKVIELLHK 439
            +I GLC   ++D+A  LFL M  + + P+ +T+ ++I    +   ++E + V+EL+ K
Sbjct: 506 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 564



 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 255/463 (55%), Gaps = 8/463 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     +L  ++ + F P+  ++ +++ G C  +R+  A  L  ++ + GC PDV +YT
Sbjct: 59  RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T++NGLC+      A  + ++M          C+PN +TY T++DG C+ G +D A EL+
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRG------CQPNVITYGTLVDGFCRVGDLDGAVELV 172

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCK 181
            +M ++  +PN +TY +++ G C  +  + A +LF EM + G   P+V T++ I+D L K
Sbjct: 173 RKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVK 232

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +GK+D+A RL++ M+  G  P+  TY++LL G C  G+++ A  L   M   GC   + +
Sbjct: 233 SGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVT 292

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G+CK   I+ A  L  EM+  G +P+VV +  L     +  + E A  L + M 
Sbjct: 293 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 352

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   + +TY + +D  CK   +  A +L  ++    C  ++ +YN++I GLCK+ ++ 
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             + L   +     VP++VT++ +I  +C   ++D A +LF  ++E+   PN++T++ L+
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472

Query: 422 RGFIRINEPSKVIELLHKM-KEINVMPDASIVSIVVDLLAKNE 463
            G  +     +   LL +M ++    PD    + V+D L K++
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 515



 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 262/526 (49%), Gaps = 67/526 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S   +    + K+C  PD+VT+ ++I GL    R+ +A  L  ++   G  P+VF+Y
Sbjct: 24  GQCSDAVLHFREMSKTC-PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSY 82

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVV------------ 94
            T+++G C+ +    AL L E+M                NG  +   V            
Sbjct: 83  NTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 142

Query: 95  --CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
             C+PN +TY T++DG C+ G +D A EL+ +M ++  +PN +TY +++ G C  +  + 
Sbjct: 143 RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDS 202

Query: 153 AKRLFIE------------------------------------MMDQGVQPNVVTFNVIM 176
           A +LF E                                    M+ +G  PNVVT++ ++
Sbjct: 203 ALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLL 262

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             LCK GK+DEA+ LL  M + G  P+  TYNT++DG C  GR++ A  L   M   GC+
Sbjct: 263 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 322

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +Y++L++ +CK  + E A+ L   M+ KG  P++  +N+L     +  +VERA +L
Sbjct: 323 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 382

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
              M + G   +  +Y T I GLCK   + E V L   +    C  DI  +N++ID +CK
Sbjct: 383 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 442

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVI 415
           + R++IA ELF  +      PN+VTY+ ++ GLC   + D+A  L  +M  +    P++I
Sbjct: 443 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 502

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           T++ +I G  +     +  +L  +M    + PD    SIV+  L K
Sbjct: 503 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 548



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 218/402 (54%), Gaps = 8/402 (1%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +++ GLC       A+  F EM+         C P++VTY T+I+GL K   +D A  
Sbjct: 13  HKSILRGLCDAGQCSDAVLHFREMSK-------TCPPDSVTYNTMINGLSKSDRLDDAIR 65

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M D    PNV +Y +V+ GFC A     A  L  +M+ +G  P+VV++  +++ LC
Sbjct: 66  LLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLC 125

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++DEA R++D MIQ G +P+  TY TL+DGFC  G ++ A EL   M   G +    
Sbjct: 126 KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI 185

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           +Y+ +++G C  ++++ AL L+ EM   G   PDV  ++T+   L +  +V+ A +L + 
Sbjct: 186 TYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEA 245

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G + +  TY + + GLCK G + EA  L   +    C  +I  YN++IDG CK GR
Sbjct: 246 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 305

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A  L   +  G   PNVVTY++++   C  G+ + A  L   M E   VPN+ T++ 
Sbjct: 306 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           L+  F + +E  +  +LL  M +   +P+    + V+  L K
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 407



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 174/307 (56%), Gaps = 8/307 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I K C  P+ V++ ++I GLC  +++ E   L  ++    C PD+ T+ T+++ +C+T  
Sbjct: 387 IQKGC-VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 445

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKP 132
             +A  LF  +          C PN VTY +++ GLCK    D+A+ LL +M + +   P
Sbjct: 446 VDIAYELFNLIQESG------CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 499

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +++TY +VI G C +K  + A +LF++M+  G+ P+ VT+++++  LCK   MDEA+ +L
Sbjct: 500 DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL 559

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           +LM+++G  P A TY TL+DGFC TG ++ A E+   + S G    V ++SI I+   K 
Sbjct: 560 ELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 619

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +  A  L   ML  G+ PD V +NTL  G  +  + E A  LF+ M++ G   D  TY
Sbjct: 620 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATY 679

Query: 313 RTFIDGL 319
            T +  L
Sbjct: 680 TTLVGHL 686



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 180/337 (53%), Gaps = 7/337 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + P+  T+ SL+   C +  +  A  L + +   GC P+V +Y T++ GLC+ +     +
Sbjct: 356 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L E+M + N      C P+ VT+ TIID +CK   VD A EL   +++    PN+VTY 
Sbjct: 416 LLLEQMLSNN------CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 469

Query: 139 SVIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           S++ G C ++ +++A+ L  EM   QG  P+++T+N ++D LCK+ ++D A +L   M+ 
Sbjct: 470 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS 529

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ PD  TY+ ++   C    ++ A  +   M   G      +Y  LI+G+CK   ++ 
Sbjct: 530 DGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDK 589

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           AL +   +LSKG  PDVV  +     L +  ++ +A +L + M R G+  DT TY T + 
Sbjct: 590 ALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLK 649

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           G C      +AV+LF  +R   CE D   Y +L+  L
Sbjct: 650 GFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 1/185 (0%)

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  KG+K    +H ++  GL +  Q   A   F EM +     D+ TY T I+GL K+  
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + +A+ L   +       ++ +YN+++ G CK+ R+E AL L   +      P+VV+Y+ 
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I GLC   Q+D+A  +   M +    PNVIT+  L+ GF R+ +    +EL+ KM E  
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 445 VMPDA 449
             P+A
Sbjct: 180 YRPNA 184


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  305 bits (781), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 168/500 (33%), Positives = 267/500 (53%), Gaps = 47/500 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+TFT L+KGLCA+ R  +A  +   ++   GC PDVF+
Sbjct: 106 GRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFS 165

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF------ 114
           Y  L+ GLC  + +  AL L   MA+  G       P+ V+Y T+++G  KEG       
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYNTVLNGFFKEGIQTKLTA 222

Query: 115 --VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
             +DKA E+L  M    + P+ +TY S++ G+C +    EA     +M   GV+PNVVT+
Sbjct: 223 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 282

Query: 173 NVIMDELCKNGKMDEA-----------------------------------SRLLDLMIQ 197
           + +M+ LCKNG+  EA                                    +L DLM++
Sbjct: 283 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVR 342

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            GV+PD  TYNTL+DG CL G+++ A +L  SM S+G K  + +Y  LINGYC+   ++ 
Sbjct: 343 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 402

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           AL+L+ EM+S G+ P+++ +N +  GLF   +   A +L+  + ++G   +  TY   + 
Sbjct: 403 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 462

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLCKN    EA+ +F  L +   + + R +N +I  L K GR++ A +LF +     LVP
Sbjct: 463 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVP 522

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +V TYS+M   L   G +++  DLFL MEEN    +    + ++R  ++  + ++    L
Sbjct: 523 DVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 582

Query: 438 HKMKEINVMPDASIVSIVVD 457
             + E +   +AS  S +++
Sbjct: 583 FMIDEKHFSLEASTASFLLE 602



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 216/422 (51%), Gaps = 26/422 (6%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP----NTVTYTTIIDGLCK 111
           P V TY  L+   CR       L+L      G    G V +     + +T+T ++ GLC 
Sbjct: 90  PTVHTYAILIGCCCRAGR----LDL------GFAALGNVVKKGFRVDAITFTPLLKGLCA 139

Query: 112 EGFVDKAKELLLQ-MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ---GVQP 167
           +     A +++L+ M +    P+V +Y ++++G C      EA  L   M D    G  P
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199

Query: 168 NVVTFNVIMDELCKNG--------KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           +VV++N +++   K G         MD+A  +L+ M+++GV PD  TYN++L G+C +G+
Sbjct: 200 DVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 259

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
              A      M S G +  V +YS L+N  CKN     A  ++  M  +G++PD+  + T
Sbjct: 260 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 319

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G  +  +V  + KLFD M R GV  D  TY T IDG C  G + EA +L  ++  + 
Sbjct: 320 LLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 379

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + DI  Y +LI+G C+  R++ AL LF+ +    + PN++TY+I++ GL +  +   A+
Sbjct: 380 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 439

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +L++ + ++     + T+++++ G  + N   + + +   +   ++  +    +I++  L
Sbjct: 440 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 499

Query: 460 AK 461
            K
Sbjct: 500 LK 501



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 225/445 (50%), Gaps = 18/445 (4%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN-GNGEFGVVCEPNT 99
           +A  +F +L   G    ++     +  + R S    A++ +  MA  G G+      P  
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKV----TPTV 92

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
            TY  +I   C+ G +D     L  +  K  + + +T+T +++G C  K  ++A  + + 
Sbjct: 93  HTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152

Query: 160 MMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH---GVRPDAFTYNTLLDGFC 215
            M + G  P+V ++N ++  LC   +  EA  LL +M      G  PD  +YNT+L+GF 
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212

Query: 216 LTG--------RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             G         ++ A E+  +M   G      +Y+ +++GYC + + + A+    +M S
Sbjct: 213 KEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS 272

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            G++P+VV +++L   L +  +   A K+FD M + G+  D  TYRT + G CK G ++E
Sbjct: 273 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIE 332

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           + +LF  +  +  + DI  YN+LIDG C +G+++ A +L  S+    + P++VTY  +I 
Sbjct: 333 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 392

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           G C   +MD A  LF +M  + V PN+IT++++++G       +   EL   + +     
Sbjct: 393 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 452

Query: 448 DASIVSIVVDLLAKNEISLNSLPSF 472
           + S  +I++  L KN ++  +L  F
Sbjct: 453 ELSTYNIILHGLCKNNLTDEALRMF 477


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 161/429 (37%), Positives = 249/429 (58%), Gaps = 6/429 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F VLG +LK  +  +A+T T+++KGLC    + +A      +   G   D  T
Sbjct: 126 LGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVT 185

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  A  L  +M       G V  PN V Y  I+DGLCK+G V +A++
Sbjct: 186 YGTLINGLCKIGLTREAFELLHKME------GQVVRPNVVIYNMIVDGLCKDGLVTEARD 239

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   +  + I P+V TYT +I GFC    W E  RL  +M+D+ V  NV T+N+++D LC
Sbjct: 240 LYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALC 299

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + +A  + +LMI+ G RPD  T+NTL+ G+CL   V  A++LF +    G    V+
Sbjct: 300 KKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVW 359

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILI GYCKN  I+ ALSL+++M  K + P++V +++L  GL +  ++  A++LF  +
Sbjct: 360 SYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAI 419

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G + +  TY   +D LCK   + +A+ELF+ +       ++ +YN LI+G CKS R+
Sbjct: 420 HDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRI 479

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A+ LF  +    LVP+ VTY+ +I GLC  G++  A +LF  M +     +VIT+++L
Sbjct: 480 DEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNIL 539

Query: 421 IRGFIRINE 429
              F +I  
Sbjct: 540 FDAFSKIQH 548



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 156/463 (33%), Positives = 236/463 (50%), Gaps = 7/463 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  V F  ++  +        A +L  ++ + G  P + T + L+N  C   H   A ++
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              +     +       N +T TTI+ GLC  G V KA E    +  +    + VTY ++
Sbjct: 136 LGMVLKRGYQL------NAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTL 189

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C      EA  L  +M  Q V+PNVV +N+I+D LCK+G + EA  L   ++  G+
Sbjct: 190 INGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGI 249

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD FTY  L+ GFC  G+      L   M        V++Y+ILI+  CK   +  A  
Sbjct: 250 DPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHD 309

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + + M+ +G +PD+V  NTL  G    + V  A KLFD     G+  D W+Y   I G C
Sbjct: 310 MRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYC 369

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           KN  I EA+ LF+ +   K   +I  Y+SLIDGLCKSGR+  A ELF ++  G   PNV+
Sbjct: 370 KNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVI 429

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+IM+  LC    +DKA +LF  M E  + PNV ++++LI G+ +     + + L  +M
Sbjct: 430 TYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEM 489

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV-HEQQEEVD 482
              N++PD+   + ++D L K+    ++   F V H+    VD
Sbjct: 490 HRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVD 532



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 229/442 (51%), Gaps = 6/442 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP  VT + LI   C    +  A ++   +   G + +  T TT++ GLC       AL 
Sbjct: 110 TPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALE 169

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            F +     G        + VTY T+I+GLCK G   +A ELL +M+ + ++PNVV Y  
Sbjct: 170 -FHDSVVAQGFL-----LDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNM 223

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G C      EA+ L+ +++ +G+ P+V T+  ++   C  G+  E +RLL  M+   
Sbjct: 224 IVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN 283

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V  + +TYN L+D  C  G +  A ++   M   G +  + +++ L++GYC   ++  A 
Sbjct: 284 VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEAR 343

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+      GI PDV  +N L +G  + ++++ A  LF++M    +A +  TY + IDGL
Sbjct: 344 KLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGL 403

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK+G I  A ELF  +       ++  YN ++D LCK   ++ A+ELF  +    L PNV
Sbjct: 404 CKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNV 463

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            +Y+I+I G C   ++D+A +LF +M    +VP+ +T++ LI G  +    S   EL + 
Sbjct: 464 SSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNV 523

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M +     D    +I+ D  +K
Sbjct: 524 MHDGGPPVDVITYNILFDAFSK 545



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 216/425 (50%), Gaps = 6/425 (1%)

Query: 39  IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           I +A ALFT+L      P V  +  ++  + +  H   A++L ++M    G  G+   P+
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQM----GLRGIT--PS 112

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
            VT + +I+  C  G +  A  +L  +  +  + N +T T++++G C   +  +A     
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            ++ QG   + VT+  +++ LCK G   EA  LL  M    VRP+   YN ++DG C  G
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            V  A++L+  +   G    VF+Y+ LI+G+C   +      L  +M+ + +  +V  +N
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L   L +   + +A  + + M   G   D  T+ T + G C    +VEA +LF T    
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC 352

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
               D+ +YN LI G CK+ R++ AL LF  +    L PN+VTYS +I GLC  G++  A
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYA 412

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            +LF  + +    PNVIT+++++    +I    K IEL + M E  + P+ S  +I+++ 
Sbjct: 413 WELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472

Query: 459 LAKNE 463
             K++
Sbjct: 473 YCKSK 477



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 184/361 (50%), Gaps = 41/361 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G     F +L ++      P+ V +  ++ GLC +  + EA  L++ +   G +PDVFT
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G C          L  +M + N         N  TY  +ID LCK+G + KA +
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNL------NVYTYNILIDALCKKGMLGKAHD 309

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M ++  +P++VT+ +++ G+C   D  EA++LF    + G+ P+V ++N+++   C
Sbjct: 310 MRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYC 369

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG------ 234
           KN ++DEA  L + M    + P+  TY++L+DG C +GR+++A ELF ++   G      
Sbjct: 370 KNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVI 429

Query: 235 ---------CK--------------------HTVFSYSILINGYCKNKEIEGALSLYSEM 265
                    CK                      V SY+ILINGYCK+K I+ A++L+ EM
Sbjct: 430 TYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEM 489

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             + + PD V +N L  GL +  ++  A++LF+ M   G   D  TY    D   K  ++
Sbjct: 490 HRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549

Query: 326 V 326
           +
Sbjct: 550 I 550


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 165/426 (38%), Positives = 249/426 (58%), Gaps = 7/426 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   F +LG ILK  F  D    T+L+KGLC + R++EA +L  +    G   D   
Sbjct: 118 LGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVC 177

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++NGLC+   T  A+ +F +M        +   PN + Y T+IDGLCK+G VD+A  
Sbjct: 178 YGTIINGLCKIGKTRDAIQMFPKMKK------IRVYPNLIMYNTVIDGLCKQGLVDEACG 231

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDEL 179
           L  +M +  I+ +V +Y S+I GFC    +  A +L  EM+ +G V P+V TFN+++D L
Sbjct: 232 LCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGL 291

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G++ EA  ++ +MI+ G +PD  +YN L++G+CL+G V  AK++F  M        V
Sbjct: 292 CKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNV 351

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY  LINGYCK + ++ A+ L +EM +K + PD V +N L  GL +  +    + L + 
Sbjct: 352 ISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEA 411

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+ +G  AD  TY   +D   K+    +A+ LF  +  +    +IR YN L+DGLCKSGR
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGR 471

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A E+F+ L      PN+ TY+IMI GLC +G +D+A  L   M  N  +PN ITFD 
Sbjct: 472 LKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDT 531

Query: 420 LIRGFI 425
           ++R  +
Sbjct: 532 IVRAIL 537



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 219/460 (47%), Gaps = 43/460 (9%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           F  L+  L    R     +L+T L+     +P + T++ L+N   +      A +L   +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                +  V         TT++ GLC +G V +A  LL +  D+  + + V Y ++I G 
Sbjct: 132 LKMGFQIDVR------ILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGL 185

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C      +A ++F +M    V PN++ +N ++D LCK G +DEA  L   M+++G+  D 
Sbjct: 186 CKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDV 245

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT-VFSYSILINGYCKNKEIEGALSLYS 263
           ++YN+++ GFC  GR   A +L   M   G  +  V++++ILI+G CK   +  A ++ +
Sbjct: 246 YSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVA 305

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            M+ +G KPD+V +N L  G      V  A ++FD+M       +  +Y T I+G CK  
Sbjct: 306 VMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVR 365

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR------------------------ 359
            + EA+ L   +       D   YN L+DGL KSGR                        
Sbjct: 366 MVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYN 425

Query: 360 -----------LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
                       + AL LF+ +    + PN+ TY+I++ GLC  G++  A+++F  +   
Sbjct: 426 VLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAK 485

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
              PN+ T++++I G  +     +   LL+KM   N +P+
Sbjct: 486 GCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPN 525



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 173/343 (50%), Gaps = 2/343 (0%)

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +LQ K   IKP+++T++ +I  F        A  L   ++  G Q +V     +M  LC 
Sbjct: 94  ILQSK-PTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCL 152

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA  LL   +  G R D   Y T+++G C  G+   A ++F  M+ +     +  
Sbjct: 153 KGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIM 212

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G CK   ++ A  L +EM+  GI+ DV  +N++  G   + + + A KL DEM 
Sbjct: 213 YNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMV 272

Query: 302 -RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            R  V  D +T+   IDGLCK G + EA  +   +     + DI +YN+L++G C SG +
Sbjct: 273 VRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSV 332

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A ++F  +     +PNV++Y  +I G C    +D+A  L  +M    +VP+ +T++ L
Sbjct: 333 GEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCL 392

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + G  +        +L+  M+      D    ++++D   K+E
Sbjct: 393 LDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHE 435



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 190/368 (51%), Gaps = 1/368 (0%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           +P+ +T++ +I+   + G +  A  LL  +     + +V   T++++G C      EA  
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           L  E +D+G + + V +  I++ LCK GK  +A ++   M +  V P+   YNT++DG C
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDV 274
             G V+ A  L   M   G +  V+SY+ +I+G+C     + A+ L  EM+ +G + PDV
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
              N L  GL ++ +V  A+ +   M + G   D  +Y   ++G C +G + EA ++F  
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +       ++ +Y +LI+G CK   ++ A+ L   +    LVP+ VTY+ ++ GL   G+
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
                DL   M  +    ++IT+++L+  + +  +  K + L   + EI + P+    +I
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461

Query: 455 VVDLLAKN 462
           ++D L K+
Sbjct: 462 LLDGLCKS 469



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 169/321 (52%), Gaps = 2/321 (0%)

Query: 148 KDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           K +N    L+  +  +  ++P+++TF+++++   + G+M  A  LL  +++ G + D   
Sbjct: 83  KRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRI 142

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
             TL+ G CL GRV  A  L       G +     Y  +ING CK  +   A+ ++ +M 
Sbjct: 143 LTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMK 202

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
              + P+++++NT+  GL +   V+ A  L  EM  NG+  D ++Y + I G C  G   
Sbjct: 203 KIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQ 262

Query: 327 EAVELFHTLRIL-KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            AV+L   + +  K   D+  +N LIDGLCK GR+  A  +   +      P++V+Y+ +
Sbjct: 263 AAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNAL 322

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + G C  G + +A+ +F  M E   +PNVI++  LI G+ ++    + + LL +M   N+
Sbjct: 323 MNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNL 382

Query: 446 MPDASIVSIVVDLLAKNEISL 466
           +PD    + ++D L+K+  SL
Sbjct: 383 VPDTVTYNCLLDGLSKSGRSL 403


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  301 bits (771), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 166/474 (35%), Positives = 263/474 (55%), Gaps = 25/474 (5%)

Query: 3   RVSHGFVVLGRILKSCF---------------TPDAVTFTSLIKGLCAESRIMEAAALFT 47
           R+S    + G ++++ F               TP  +TF +LI GLC E R++EAAAL  
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250

Query: 48  KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIID 107
           K+   G   DV TY T+VNG+C+   T  ALNL  +M   +       +P+ V Y+ IID
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDVVIYSAIID 304

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            LCK+G    A+ L  +M +K I PNV TY  +I GFC    W++A+RL  +M+++ + P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           +V+TFN ++    K GK+ EA +L D M+   + PD  TYN+++ GFC   R + AK +F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M S      V +++ +I+ YC+ K ++  + L  E+  +G+  +   +NTL  G  E+
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             +  A  LF EM  +GV  DT T    + G C+N  + EA+ELF  +++ K + D  AY
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N +I G+CK  +++ A +LF SLP   + P+V TY++MI G C    +  A  LF  M++
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           N   P+  T++ LIRG ++  E  K IEL+ +M+      DA  + +  +++ +
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 195/370 (52%), Gaps = 10/370 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG       +L ++ ++   PD V ++++I  LC +    +A  LF+++   G  P+VFT
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++G C       A  L  +M            P+ +T+  +I    KEG + +A++
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVLTFNALISASVKEGKLFEAEK 387

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P+ VTY S+I GFC    +++AK +F    D    P+VVTFN I+D  C
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYC 443

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  ++DE  +LL  + + G+  +  TYNTL+ GFC    +N A++LF  M S G      
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +IL+ G+C+N+++E AL L+  +    I  D V +N +  G+ +  +V+ A+ LF  +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +GV  D  TY   I G C    I +A  LFH ++    E D   YN+LI G  K+G +
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623

Query: 361 EIALELFRSL 370
           + ++EL   +
Sbjct: 624 DKSIELISEM 633



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 222/465 (47%), Gaps = 33/465 (7%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           +F  LIK  C   ++  + + F KL   G +PDV T+ TL++GLC       AL LF  M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                                     + GF++ A  L  QM +  + P V+T+ ++I G 
Sbjct: 203 V-------------------------ETGFLE-AVALFDQMVEIGLTPVVITFNTLINGL 236

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C      EA  L  +M+ +G+  +VVT+  I++ +CK G    A  LL  M +  ++PD 
Sbjct: 237 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 296

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             Y+ ++D  C  G  + A+ LF  M   G    VF+Y+ +I+G+C       A  L  +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+ + I PDV+  N L     +  ++  A KL DEM    +  DT TY + I G CK+  
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
             +A  +F     L    D+  +N++ID  C++ R++  ++L R +    LV N  TY+ 
Sbjct: 417 FDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I G C    ++ A+DLF +M  + V P+ IT ++L+ GF    +  + +EL   ++   
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 445 VMPDASIVSIVVDLLAKN---EISLNSLPSFTVHEQQEEVDESNV 486
           +  D    +I++  + K    + + +   S  +H  + +V   NV
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 171/320 (53%), Gaps = 10/320 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +++    PD +TF +LI     E ++ EA  L  ++      PD  TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++ G C+ +    A ++F+ MA+          P+ VT+ TIID  C+   VD+  +L
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQL 454

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++  + +  N  TY ++I GFC   + N A+ LF EM+  GV P+ +T N+++   C+
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N K++EA  L +++    +  D   YN ++ G C   +V+ A +LF S+   G +  V +
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+++I+G+C    I  A  L+ +M   G +PD   +NTL  G  +  +++++ +L  EM+
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634

Query: 302 RNGVAADTWTYRTFIDGLCK 321
            NG + D +T +   + +C+
Sbjct: 635 SNGFSGDAFTIKMAEEIICR 654



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 19/356 (5%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  L  +M+ + I  N+ ++  +I+ FC     + +   F ++   G QP+VVTFN +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 176 MDELCKNGKMDEA---------------SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +  LC   ++ EA                 L D M++ G+ P   T+NTL++G CL GRV
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A  L   M   G    V +Y  ++NG CK  + + AL+L S+M    IKPDVVI++ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +      A  LF EM   G+A + +TY   IDG C  G   +A  L   +   + 
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  +N+LI    K G+L  A +L   +    + P+ VTY+ MI G C   + D A+ 
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +F  M      P+V+TF+ +I  + R     + ++LL ++    ++ + +  + ++
Sbjct: 423 MFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 15/279 (5%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    D M++      A   N ++  F    R + A  L+  ME       ++S++I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF---------- 294
           LI  +C   ++  +LS + ++   G +PDVV  NTL  GL    ++  A           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 295 -----KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
                 LFD+M   G+     T+ T I+GLC  G ++EA  L + +       D+  Y +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +++G+CK G  + AL L   +    + P+VV YS +I  LC DG    A+ LF +M E  
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           + PNV T++ +I GF      S    LL  M E  + PD
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  301 bits (771), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 159/461 (34%), Positives = 257/461 (55%), Gaps = 22/461 (4%)

Query: 6   HGFVVLGRILKSC------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           HG  V  RI ++         P+ VTFT+L+ GLC E R++EA AL  ++   G +P+  
Sbjct: 159 HGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQI 218

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY T+V+G+C+   T+ ALNL  +M   +        PN V Y TIIDGL K+G    A 
Sbjct: 219 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHII-----PNVVIYNTIIDGLWKDGRHSDAH 273

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L ++M++K I P++VTY  +I GFC +  W++A++L  EM+++ + P+VVTF+ +++  
Sbjct: 274 NLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAF 333

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K GK  EA  L D M+   + P   TY++++DGFC   R++ A+ +F    + GC   +
Sbjct: 334 VKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDI 393

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +++ LI GYC+ K ++  + L  EM   G+  + + + TL  G  ++  +  A  L  E
Sbjct: 394 ITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQE 453

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----------CEFDIRAYN 348
           M  +GV  +  T  T +DGLC NG + +A+E+F  ++  K            E D++ YN
Sbjct: 454 MISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYN 513

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            LI GL   G+   A EL+  +P   +VP+ +TYS MI GLC   ++D+A  +F  M   
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 573

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           +  P+V+TF+ LI G+ +       +EL  +M +  ++ DA
Sbjct: 574 SFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADA 614



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 151/476 (31%), Positives = 250/476 (52%), Gaps = 19/476 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFT 60
           GRV     +L R+L+    P+ +T+ +++ G+C     + A  L  K+  V    P+V  
Sbjct: 196 GRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVI 255

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++GL +      A NLF EM            P+ VTY  +I+G C  G    A++
Sbjct: 256 YNTIIDGLWKDGRHSDAHNLFIEMQEKE------IFPDIVTYNCMINGFCISGRWSDAEQ 309

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M ++ I P+VVT++++I  F     + EA+ L+ EM+ + + P+ VT++ ++D  C
Sbjct: 310 LLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFC 369

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++D A  +  L    G  PD  T+NTL+ G+C   RV+   +L   M   G      
Sbjct: 370 KQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 429

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G+C+  ++  A  L  EM+S G+ P+VV  NTL  GL +  +++ A ++F  M
Sbjct: 430 TYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 489

Query: 301 QR-----------NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           Q+           NGV  D  TY   I GL   G  +EA EL+  +       D   Y+S
Sbjct: 490 QKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +IDGLCK  RL+ A ++F S+      P+VVT++ +I G C  G +D   +LF +M +  
Sbjct: 550 MIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRG 609

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEI 464
           +V + IT+  LI GF +++     +++  +M    V PD  +I +++  L +K E+
Sbjct: 610 IVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 665



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 221/443 (49%), Gaps = 13/443 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G +++S   P  + F  L+  +    R     +L  K+ +     + +++T L+   C
Sbjct: 68  LFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFC 127

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
             S    AL+ F ++     + G    P  VT+ T++ GLC E  + +A +L  QM    
Sbjct: 128 SCSKLPFALSTFGKIT----KLGF--HPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            KPNVVT+T+++ G C      EA  L   M++ G+QPN +T+  I+D +CK G    A 
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 190 RLLDLM--IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
            LL  M  + H + P+   YNT++DG    GR + A  LF+ M+       + +Y+ +IN
Sbjct: 238 NLLRKMEEVSH-IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMIN 296

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+C +     A  L  EML + I PDVV  + L     +  +   A +L+DEM    +  
Sbjct: 297 GFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP 356

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
            T TY + IDG CK   +  A  +F+      C  DI  +N+LI G C++ R++  ++L 
Sbjct: 357 STVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 416

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    LV N +TY+ +I G C  G ++ A+DL  +M  + V PNV+T + L+ G    
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN 476

Query: 428 NEPSKVIELLHKMKEINVMPDAS 450
            +    +E+   M++  +  DAS
Sbjct: 477 GKLKDALEMFKAMQKSKMDIDAS 499



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 187/384 (48%), Gaps = 17/384 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +L+    PD VTF++LI     E +  EA  L+ ++      P   TY
Sbjct: 302 GRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTY 361

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +++++G C+ +    A ++F             C P+ +T+ T+I G C+   VD   +L
Sbjct: 362 SSMIDGFCKQNRLDAAEHMFYLTPTKG------CSPDIITFNTLIAGYCRAKRVDDGIKL 415

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  +  N +TYT++I GFC   D N A+ L  EM+  GV PNVVT N ++D LC 
Sbjct: 416 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCD 475

Query: 182 NGKMDEASRLLDLMIQ-----------HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           NGK+ +A  +   M +           +GV PD  TYN L+ G    G+   A+EL+  M
Sbjct: 476 NGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEM 535

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G      +YS +I+G CK   ++ A  ++  M SK   PDVV  NTL  G  +   V
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMV 595

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           +   +LF EM + G+ AD  TY T I G  K   I  A+++F  +       D     ++
Sbjct: 596 DDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNM 655

Query: 351 IDGLCKSGRLEIALELFRSLPCGV 374
           + GL     LE A+ +   L   V
Sbjct: 656 LTGLWSKEELERAVAMLEDLQMSV 679



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 205/431 (47%), Gaps = 12/431 (2%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P V  +  L+  + R     V ++L ++M        + C  N  ++T ++   C    +
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEM----LRMPC--NAYSFTILMKCFCSCSKL 132

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A     ++      P VVT+ +++ G C     +EA  LF +M     +PNVVTF  +
Sbjct: 133 PFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTL 188

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG- 234
           M+ LC+ G++ EA  LLD M++ G++P+  TY T++DG C  G    A  L   ME +  
Sbjct: 189 MNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH 248

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
               V  Y+ +I+G  K+     A +L+ EM  K I PD+V +N +  G     +   A 
Sbjct: 249 IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAE 308

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +L  EM    +  D  T+   I+   K G   EA EL+  +           Y+S+IDG 
Sbjct: 309 QLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGF 368

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK  RL+ A  +F   P     P+++T++ +I G C   ++D    L  +M E  +V N 
Sbjct: 369 CKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 428

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
           IT+  LI GF ++ + +   +LL +M    V P+    + ++D L  N    ++L  F  
Sbjct: 429 ITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 475 HEQQE-EVDES 484
            ++ + ++D S
Sbjct: 489 MQKSKMDIDAS 499



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 156/321 (48%), Gaps = 5/321 (1%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF   K  ++A  LF  M+     P+V+ F  +M  + + G+ D    L   M    +  
Sbjct: 55  GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           +A+++  L+  FC   ++  A   F  +  +G   TV +++ L++G C    I  AL L+
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M     KP+VV   TL  GL    +V  A  L D M  +G+  +  TY T +DG+CK 
Sbjct: 175 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 323 GYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           G  V A+ L   +  +     ++  YN++IDGL K GR   A  LF  +    + P++VT
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ MI G C  G+   A  L  +M E  + P+V+TF  LI  F++  +  +  EL  +M 
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350

Query: 442 EINVMPDASIVSIVVDLLAKN 462
             +++P     S ++D   K 
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQ 371



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 111/219 (50%), Gaps = 5/219 (2%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G+ + K ++ A+ L+  M+     P V+    L   +  + + +    L  +M+   
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  + +++   +   C    +  A+  F  +  L     +  +N+L+ GLC   R+  AL
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +LF  +      PNVVT++ ++ GLC +G++ +A  L   M E+ + PN IT+  ++ G 
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAKN 462
            ++ +    + LL KM+E+ +++P+  I + ++D L K+
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKD 266


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  301 bits (771), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 163/410 (39%), Positives = 233/410 (56%), Gaps = 6/410 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            V +GF VLG+I+K    P+ +TF++LI G C E +I  A  LF  +   G +P+V +Y+
Sbjct: 141 HVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYS 200

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++ GLCR   T   + L E M        V CEP+ V Y TI+D LCK+  V++A  + 
Sbjct: 201 IIIKGLCRVGKTTEVIKLLEHMKV------VGCEPDVVIYNTIVDRLCKDRLVNEAVHIF 254

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +MK   I P VVTYTS+I G      W EA  L  EM    + P++V F+V++D +CK 
Sbjct: 255 CKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKE 314

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++ EA  +L  M + GV PD  TYNTL++G+CL   V  A+++F  M S G    VFS+
Sbjct: 315 GEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSF 374

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           SIL+NGYCK K I+ A  L+ EM  +G+ PD V +NTL  GL +  +   A +LF +M  
Sbjct: 375 SILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHS 434

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           NG   +  TY   +D L K GY+ +A+ LF  +     + D+  YN +IDG+CK G+ + 
Sbjct: 435 NGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKD 494

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           A ELF  L    L PN    +  I G+C  G +D+A   F  ME++   P
Sbjct: 495 ARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/393 (34%), Positives = 210/393 (53%), Gaps = 8/393 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D ++ T LI   C    +    ++  K+   G EP+V T++TL+NG C       A+ LF
Sbjct: 125 DVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELF 184

Query: 82  EEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + M A G        +PN  +Y+ II GLC+ G   +  +LL  MK    +P+VV Y ++
Sbjct: 185 DVMVARGY-------KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTI 237

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C  +  NEA  +F +M   G+ P VVT+  ++  L   G+  EA  LL+ M    +
Sbjct: 238 VDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNI 297

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD   ++ L+D  C  G V+ A+ +  +M  MG +  V +Y+ L+NGYC   E+  A  
Sbjct: 298 MPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARK 357

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++  M+SKG  PDV   + L  G  +  +++ A +LFDEM   G+  DT +Y T I GLC
Sbjct: 358 VFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLC 417

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           +    +EA ELF  +       ++  Y+ L+D L K G L+ A+ LFR++    L P++V
Sbjct: 418 QARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLV 477

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           TY+IMI G+C  G+   AR+LF ++    + PN
Sbjct: 478 TYNIMIDGMCKYGKFKDARELFAELSVKGLQPN 510



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 227/459 (49%), Gaps = 6/459 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  V F  L   L          +L  ++ + G   DV + T L+N  CR  H     ++
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             ++     + G+  EPN +T++T+I+G C EG + +A EL   M  +  KPNV +Y+ +
Sbjct: 149 LGKII----KLGL--EPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSII 202

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I+G C      E  +L   M   G +P+VV +N I+D LCK+  ++EA  +   M   G+
Sbjct: 203 IKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGI 262

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P   TY +L+ G    GR   A  L   M+       + ++S+LI+  CK  E+  A  
Sbjct: 263 LPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARV 322

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +   M   G++PDV  +NTL  G     +V  A K+F+ M   G   D +++   ++G C
Sbjct: 323 ILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYC 382

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   I EA +LF  +       D  +YN+LI GLC++ R   A ELF+ +      PN+V
Sbjct: 383 KAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLV 442

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TYSI++  L   G +D+A  LF  ME + + P+++T++++I G  +  +     EL  ++
Sbjct: 443 TYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAEL 502

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
               + P+  + +  +D + K  +   +  +F   E+ +
Sbjct: 503 SVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDD 541



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 196/386 (50%), Gaps = 6/386 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           AL+ F  M N N        P+ V +  +   L +         L  QM+   I  +V++
Sbjct: 75  ALSAFNHMVNTNPL------PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLS 128

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
            T +I  FC     +    +  +++  G++PNV+TF+ +++  C  GK+  A  L D+M+
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G +P+  +Y+ ++ G C  G+     +L   M+ +GC+  V  Y+ +++  CK++ + 
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+ ++ +M   GI P VV + +L  GL  + + + AF L +EM+   +  D   +   I
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D +CK G + EA  +  T+  +  E D+  YN+L++G C    +  A ++F  +     +
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRM 368

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+V ++SI++ G C   ++D+A+ LF +M    ++P+ ++++ LI G  +   P +  EL
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEEL 428

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
              M      P+    SI++D L+K 
Sbjct: 429 FKDMHSNGYPPNLVTYSILLDCLSKQ 454



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 142/272 (52%), Gaps = 6/272 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR    F +L  +      PD V F+ LI  +C E  + EA  +   +   G EPDV T
Sbjct: 279 LGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVAT 338

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG C     + A  +FE M +  G       P+  +++ +++G CK   +D+AK+
Sbjct: 339 YNTLMNGYCLRMEVVEARKVFEVMIS-KGRM-----PDVFSFSILVNGYCKAKRIDEAKQ 392

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + + P+ V+Y ++I G C A+   EA+ LF +M   G  PN+VT+++++D L 
Sbjct: 393 LFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLS 452

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +D+A  L   M   G++PD  TYN ++DG C  G+   A+ELF  +   G +   +
Sbjct: 453 KQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNW 512

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             +  I+G CK   ++ A   + +M      P
Sbjct: 513 VCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 119/242 (49%)

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           +N A   F  M +     ++  +  L +   + K  +  +SL  +M   GI  DV+    
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L      +  V+  F +  ++ + G+  +  T+ T I+G C  G I  A+ELF  +    
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + ++ +Y+ +I GLC+ G+    ++L   +      P+VV Y+ ++  LC D  +++A 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +F  M+   ++P V+T+  LI G   +    +   LL++MK  N+MPD    S+++D++
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 460 AK 461
            K
Sbjct: 312 CK 313



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 39/86 (45%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           S   PD VT+  +I G+C   +  +A  LF +L V G +P+ +  T  ++G+C+      
Sbjct: 470 SGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDE 529

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTY 102
           A   F +M   +      C     TY
Sbjct: 530 AHKAFRQMEKDDCSPAQGCINGRATY 555


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 161/458 (35%), Positives = 262/458 (57%), Gaps = 7/458 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++S    +LG+++K  + P  VT  SL+ G C  +RI EA AL  ++   G +PD  T+T
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TLV+GL + +    A+ L E M          C+P+ VTY  +I+GLCK G  D A  LL
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKG------CQPDLVTYGAVINGLCKRGEPDLALNLL 238

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+   I+ +VV Y ++I G C  K  ++A  LF +M  +G++P+V T+N ++  LC  
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFS 241
           G+  +ASRLL  M++  + PD   +N L+D F   G++  A++L+  M +S  C   V +
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G+CK K +E  + ++ EM  +G+  + V + TL  G F+    + A  +F +M 
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +GV  D  TY   +DGLC NG +  A+ +F  ++    + DI  Y ++I+ LCK+G++E
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
              +LF SL    + PNVVTY+ M+ G C  G  ++A  LF++M+E+  +PN  T++ LI
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           R  +R  + +   EL+ +M+      DAS   +V ++L
Sbjct: 539 RARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 222/438 (50%), Gaps = 13/438 (2%)

Query: 28  SLIKGLCAESRIMEAAALF---TKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           +L + +  + ++ +A  LF    K R F   P +  ++ L++ + + +   + ++L E+M
Sbjct: 45  NLSRKVLQDLKLDDAIGLFGDMVKSRPF---PSIVEFSKLLSAIAKMNKFDLVISLGEQM 101

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            N     G+    N  TY+  I+  C+   +  A  +L +M      P++VT  S++ GF
Sbjct: 102 QN----LGI--SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGF 155

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C+    +EA  L  +M++ G QP+ VTF  ++  L ++ K  EA  L++ M+  G +PD 
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  +++G C  G  + A  L   ME    +  V  Y+ +I+G CK K ++ A  L+++
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M +KGIKPDV  +N L   L    +   A +L  +M    +  D   +   ID   K G 
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335

Query: 325 IVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
           +VEA +L+  + +   C  D+ AYN+LI G CK  R+E  +E+FR +    LV N VTY+
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I G       D A+ +F  M  + V P+++T+++L+ G          + +   M++ 
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455

Query: 444 NVMPDASIVSIVVDLLAK 461
           ++  D    + +++ L K
Sbjct: 456 DMKLDIVTYTTMIEALCK 473



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 188/370 (50%), Gaps = 7/370 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ V ++ ++  + K    D    L  QM++  I  N+ TY+  I  FC     + A  +
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +MM  G  P++VT N +++  C   ++ EA  L+D M++ G +PD  T+ TL+ G   
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             + + A  L   M   GC+  + +Y  +ING CK  E + AL+L ++M    I+ DVVI
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +NT+  GL +   ++ AF LF++M+  G+  D +TY   I  LC  G   +A  L   + 
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELF----RSLPCGVLVPNVVTYSIMIGGLCND 392
                 D+  +N+LID   K G+L  A +L+    +S  C    P+VV Y+ +I G C  
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC---FPDVVAYNTLIKGFCKY 369

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
            ++++  ++F +M +  +V N +T+  LI GF +  +      +  +M    V PD    
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429

Query: 453 SIVVDLLAKN 462
           +I++D L  N
Sbjct: 430 NILLDGLCNN 439



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V    VV   + K     D VT+T++I+ LC   ++ +   LF  L + G +P+V TY
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TT+++G CR      A  LF EM     E G +  PN+ TY T+I    ++G    + EL
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMK----EDGPL--PNSGTYNTLIRARLRDGDEAASAEL 553

Query: 122 LLQMKDKNIKPNVVTY 137
           + +M+      +  T+
Sbjct: 554 IKEMRSCGFAGDASTF 569


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 256/462 (55%), Gaps = 8/462 (1%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFT 60
            G +   + +L  + +     + +    +IKGLC+  ++  A  LF ++   G C PDVFT
Sbjct: 891  GDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFT 950

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y+T+V+ L ++     A  L E+M +        C PN VTY++++ GLCK G +D+A  
Sbjct: 951  YSTIVDSLVKSGKVDDACRLVEDMVSKG------CSPNVVTYSSLLHGLCKAGKLDEATA 1004

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            LL +M      PN+VTY ++I G C     +EA  L  EM+D G QPNVVT+ V++D  C
Sbjct: 1005 LLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFC 1064

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            K GK ++A  L+++M++ G  P+ FTYN+LLD FC    V  A +L  SM   GC   V 
Sbjct: 1065 KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 1124

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            SY+ +I G CK  ++   + L  +MLS    PD+V  NT+   + + ++V+ A++LF+ +
Sbjct: 1125 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 1184

Query: 301  QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGR 359
            Q +G   +  TY + + GLCK+    +A  L   + R   C  DI  YN++IDGLCKS R
Sbjct: 1185 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKR 1244

Query: 360  LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            ++ A +LF  +    L P+ VTYSI+I  LC    MD+A ++   M +N   P  IT+  
Sbjct: 1245 VDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGT 1304

Query: 420  LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            LI GF +     K +E+L  +      PD    SI +D L+K
Sbjct: 1305 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSK 1346



 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 248/460 (53%), Gaps = 8/460 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     +L  ++ + F P+  ++ +++ G C  +R+  A  L  ++   GC PDV +YT
Sbjct: 245 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYT 304

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T++NGLC+      A  + ++M          C+PN +TY T++DG C+ G +D A EL+
Sbjct: 305 TVINGLCKLDQVDEACRVMDKMIQRG------CQPNVITYGTLVDGFCRVGDLDGAVELV 358

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M ++  +PN +TY +++  FC   D   A ++   M+  G  P+ + ++ I+   CK 
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA 418

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ EA  LL+ MI+ G RPD    +TL+D  C    ++ A+EL      M C   V +Y
Sbjct: 419 GKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAY 478

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           SILI+  CK K +  A S    M+     PDVV +N++  GL +  ++  AF LFD M+ 
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV  D  TY   I   CK+  +  A ++   ++  KC  D+  Y++LI+GLCK+G ++ 
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598

Query: 363 ALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           A ++F+  L CG   PN+VTY+ +I GLC   ++++A ++   M + +  P+ IT+  LI
Sbjct: 599 AFDVFQEMLGCGC-APNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLI 657

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G    +   +   +L +MK+   +PD      ++  L K
Sbjct: 658 NGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQK 697



 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 159/446 (35%), Positives = 253/446 (56%), Gaps = 12/446 (2%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            + K C +P+ VT++SL+ GLC   ++ EA AL  ++   GC P++ TY T+++G C+   
Sbjct: 975  VSKGC-SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 1033

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
               A +L EEM +G       C+PN VTYT ++D  CK G  + A  L+  M +K   PN
Sbjct: 1034 IDEAYHLLEEMVDGG------CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 1087

Query: 134  VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            + TY S++  FC   +   A +L   M+ +G  PNVV++N ++  LCK  K+ E   LL+
Sbjct: 1088 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 1147

Query: 194  LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
             M+ +   PD  T+NT++D  C T RV+ A ELF  ++  GC   + +Y+ L++G CK++
Sbjct: 1148 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 1207

Query: 254  EIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
              + A  L  EM  K G  PD++ +NT+  GL +  +V+RA+KLF +M  +G+A D  TY
Sbjct: 1208 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 1267

Query: 313  RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA--YNSLIDGLCKSGRLEIALELFRSL 370
               I  LCK  ++ EA  +   +  LK  FD  A  Y +LIDG CK+G L+ ALE+ + L
Sbjct: 1268 SIVISSLCKWRFMDEANNVLELM--LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 1325

Query: 371  PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                  P+VVT+SI I  L   G++ +A +L   M    +VP+ +T++ L++GF   +  
Sbjct: 1326 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLT 1385

Query: 431  SKVIELLHKMKEINVMPDASIVSIVV 456
               ++L   M++    PD +  + +V
Sbjct: 1386 EDAVDLFEVMRQCGCEPDNATYTTLV 1411



 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 154/458 (33%), Positives = 249/458 (54%), Gaps = 7/458 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S   +    + K+C  PD+VT+ ++I GL    R+ +A  L  ++   G  P+VF+Y
Sbjct: 210 GQCSDAVLHFREMSKTC-PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSY 268

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G C+ +    AL L E+M          C P+ V+YTT+I+GLCK   VD+A  +
Sbjct: 269 NTVLHGFCKANRVENALWLLEQMVTRG------CPPDVVSYTTVINGLCKLDQVDEACRV 322

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M  +  +PNV+TY +++ GFC   D + A  L  +M ++G +PN +T+N IM   C+
Sbjct: 323 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCR 382

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              M+ A ++L +MIQ G  PDA  Y+T++ GFC  G++  A +L   M   GC+  V  
Sbjct: 383 RNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVAC 442

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            S LI+  CK   I+ A  L    +     PDVV ++ L   L +  ++  A    D M 
Sbjct: 443 LSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMV 502

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +N    D  TY + +DGLCK+  I +A  LF  +R      D+  Y+ +I   CK   L+
Sbjct: 503 KNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLD 562

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++   +     VP+VVTYS +I GLC  G +DKA D+F +M      PN++T++ LI
Sbjct: 563 SAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLI 622

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            G  +IN+  +  E+L  M++ +  PD+   + +++ L
Sbjct: 623 DGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGL 660



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/421 (33%), Positives = 227/421 (53%), Gaps = 7/421 (1%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G++     +L R+ +S  +P+ VT+ ++I G C   RI EA  L  ++   GC+P+V TY
Sbjct: 997  GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T L++  C+      A+ L E M     E G V  PN  TY +++D  CK+  V++A +L
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMV----EKGYV--PNLFTYNSLLDMFCKKDEVERACQL 1110

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L  M  K   PNVV+Y +VI G C A   +E   L  +M+     P++VTFN I+D +CK
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVF 240
              ++D A  L +L+ + G  P+  TYN+L+ G C + R + A+ L   M    GC   + 
Sbjct: 1171 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 1230

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +Y+ +I+G CK+K ++ A  L+ +MLS G+ PD V ++ +   L +   ++ A  + + M
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290

Query: 301  QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +NG      TY T IDG CK G + +A+E+   L       D+  ++  ID L K GRL
Sbjct: 1291 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 1350

Query: 361  EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
              A EL  ++    LVP+ VTY+ ++ G C+    + A DLF  M +    P+  T+  L
Sbjct: 1351 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL 1410

Query: 421  I 421
            +
Sbjct: 1411 V 1411



 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 207/406 (50%), Gaps = 6/406 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + +V     V+ ++++    P+ +T+ +L+ G C    +  A  L  K+   G  P+  T
Sbjct: 313 LDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAIT 372

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++  CR +    A  + + M          C P+ + Y+TII G CK G + +A +
Sbjct: 373 YNNIMHVFCRRNDMERAHQVLQMMIQTG------CPPDAINYSTIISGFCKAGKLREAHD 426

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL QM  +  +P+V   +++I   C A   + A+ L    +     P+VV +++++  LC
Sbjct: 427 LLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALC 486

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++ EA   LD+M+++   PD  TYN+++DG C + R+N A  LF  M + G    V 
Sbjct: 487 KAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVV 546

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YSI+I+ +CK+  ++ A  +   M      PDVV ++ L  GL +   V++AF +F EM
Sbjct: 547 TYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEM 606

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G A +  TY T IDGLCK   + +A E+   +R   C  D   Y  LI+GLC + RL
Sbjct: 607 LGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRL 666

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           E A  + R +     +P+ +TY  ++  L     ++    L  +ME
Sbjct: 667 EEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 216/413 (52%), Gaps = 10/413 (2%)

Query: 53   GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
            G   D +T   L+  L R      AL ++           + C PN  T+T +I GLC+ 
Sbjct: 839  GYNHDTYTCNCLLQALLRLKRPKDALQVYRNK--------LCCSPNMFTFTILIHGLCRA 890

Query: 113  GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVT 171
            G +  A ELL +M    +  NV+ +  VI+G C A+  + A  LF EM + G   P+V T
Sbjct: 891  GDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFT 950

Query: 172  FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
            ++ I+D L K+GK+D+A RL++ M+  G  P+  TY++LL G C  G+++ A  L   M 
Sbjct: 951  YSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 1010

Query: 232  SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
              GC   + +Y+ +I+G+CK   I+ A  L  EM+  G +P+VV +  L     +  + E
Sbjct: 1011 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 1070

Query: 292  RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
             A  L + M   G   + +TY + +D  CK   +  A +L  ++    C  ++ +YN++I
Sbjct: 1071 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 1130

Query: 352  DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
             GLCK+ ++   + L   +     VP++VT++ +I  +C   ++D A +LF  ++E+   
Sbjct: 1131 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 1190

Query: 412  PNVITFDMLIRGFIRINEPSKVIELLHKM-KEINVMPDASIVSIVVDLLAKNE 463
            PN++T++ L+ G  +     +   LL +M ++    PD    + V+D L K++
Sbjct: 1191 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 1243



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 216/426 (50%), Gaps = 12/426 (2%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D  TY+TL++G  R    + A  LF+EM N  G      + +   + +I+ GLC  G   
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEM-NRKG-----LKAHAGVHKSILRGLCDAGQCS 213

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
            A     +M  K   P+ VTY ++I G   +   ++A RL  EM+D G  PNV ++N ++
Sbjct: 214 DAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVL 272

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              CK  +++ A  LL+ M+  G  PD  +Y T+++G C   +V+ A  +   M   GC+
Sbjct: 273 HGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 332

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +Y  L++G+C+  +++GA+ L  +M  +G +P+ + +N +       + +ERA ++
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQV 392

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
              M + G   D   Y T I G CK G + EA +L   +    C  D+   ++LID LCK
Sbjct: 393 LQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCK 452

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +  ++ A EL R        P+VV YSI+I  LC   ++ +A      M +N   P+V+T
Sbjct: 453 AAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT 512

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS-FTVH 475
           ++ ++ G  +    +    L  +M+   VMPD    SIV+    K+    N+L S F + 
Sbjct: 513 YNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKD----NNLDSAFKML 568

Query: 476 EQQEEV 481
           E+ +E 
Sbjct: 569 ERMKEA 574



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 239/471 (50%), Gaps = 38/471 (8%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            I K C  P+ V++ ++I GLC  +++ E   L  ++    C PD+ T+ T+++ +C+T  
Sbjct: 1115 IQKGC-VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 1173

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKP 132
              +A  LF  +          C PN VTY +++ GLCK    D+A+ LL +M + +   P
Sbjct: 1174 VDIAYELFNLIQESG------CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 1227

Query: 133  NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            +++TY +VI G C +K  + A +LF++M+  G+ P+ VT+++++  LCK   MDEA+ +L
Sbjct: 1228 DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL 1287

Query: 193  DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
            +LM+++G  P A TY TL+DGFC TG ++ A E+   + S G    V ++SI I+   K 
Sbjct: 1288 ELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 1347

Query: 253  KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
              +  A  L   ML  G+ PD V +NTL  G  +    E A  LF+ M++ G   D  TY
Sbjct: 1348 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATY 1407

Query: 313  RTFIDGLC-KNGY-----------IVEAVELFHTLR-----ILKCEFDIRAYNSLIDGLC 355
             T +  L  K  Y           +    +L H L       ++ E D+R   +++D   
Sbjct: 1408 TTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFG 1467

Query: 356  KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
            K G  + A ++F     G+   NVV +S M+G      Q ++A  L+  M    V P+ +
Sbjct: 1468 KCGSPQDARKVFE----GMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAV 1523

Query: 416  TFDMLI-----RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            TF  L+      G +     + V E +   ++  + P     S V+DLL +
Sbjct: 1524 TFLSLLTMCCHAGLL----DAAVDEFVSISRDYGLEPGVDHFSCVIDLLGR 1570



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 223/463 (48%), Gaps = 27/463 (5%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +GR+   + +L  ++     P+ VT+T L+   C   +  +A  L   +   G  P++FT
Sbjct: 1031 LGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFT 1090

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y +L++  C+      A  L   M          C PN V+Y T+I GLCK   V +   
Sbjct: 1091 YNSLLDMFCKKDEVERACQLLSSMIQKG------CVPNVVSYNTVIAGLCKATKVHEGVL 1144

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            LL QM   N  P++VT+ ++I   C     + A  LF  + + G  PN+VT+N ++  LC
Sbjct: 1145 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 1204

Query: 181  KNGKMDEASRLLDLMI-QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K+ + D+A  LL  M  + G  PD  TYNT++DG C + RV+ A +LF+ M S G     
Sbjct: 1205 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 1264

Query: 240  FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             +YSI+I+  CK + ++ A ++   ML  G  P  + + TL  G  +   +++A ++   
Sbjct: 1265 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQL 1324

Query: 300  MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            +   G   D  T+  FID L K G + +A EL  T+       D   YN+L+ G C +  
Sbjct: 1325 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASL 1384

Query: 360  LEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
             E A++LF  +  CG   P+  TY+ ++G L +       +DL  ++ ++          
Sbjct: 1385 TEDAVDLFEVMRQCGC-EPDNATYTTLVGHLVDKKSY---KDLLAEVSKS---------- 1430

Query: 419  MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            M+  GF   +E S  +E       I V  D  +   +VD+  K
Sbjct: 1431 MVDTGFKLNHELSSKLE-----ASIEVEADVRLGCAIVDMFGK 1468



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 158/315 (50%), Gaps = 1/315 (0%)

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           A  +++A  LF   ++     + VT++ ++    + GK+  A  L D M + G++  A  
Sbjct: 139 AHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGV 198

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           + ++L G C  G+ + A   F  M S  C     +Y+ +ING  K+  ++ A+ L  EM+
Sbjct: 199 HKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV 257

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G  P+V  +NT+  G  + ++VE A  L ++M   G   D  +Y T I+GLCK   + 
Sbjct: 258 DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVD 317

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA  +   +    C+ ++  Y +L+DG C+ G L+ A+EL R +      PN +TY+ ++
Sbjct: 318 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 377

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
              C    M++A  +   M +    P+ I +  +I GF +  +  +  +LL +M      
Sbjct: 378 HVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCR 437

Query: 447 PDASIVSIVVDLLAK 461
           PD + +S ++D L K
Sbjct: 438 PDVACLSTLIDALCK 452



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 149/313 (47%), Gaps = 9/313 (2%)

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
           +W E +         G Q  +   N +++ L K  +  +A  L    I+     D  TY+
Sbjct: 114 EWAETR--------DGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYS 165

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           TL+ GF   G++  A ELF  M   G K     +  ++ G C   +   A+  + EM SK
Sbjct: 166 TLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SK 224

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
              PD V +NT+  GL +  +++ A +L +EM  NG A + ++Y T + G CK   +  A
Sbjct: 225 TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENA 284

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + L   +    C  D+ +Y ++I+GLCK  +++ A  +   +      PNV+TY  ++ G
Sbjct: 285 LWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 344

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C  G +D A +L   M E    PN IT++ ++  F R N+  +  ++L  M +    PD
Sbjct: 345 FCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPD 404

Query: 449 ASIVSIVVDLLAK 461
           A   S ++    K
Sbjct: 405 AINYSTIISGFCK 417



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 114/215 (53%), Gaps = 7/215 (3%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           C+ PD VT+ S++ GLC   RI +A  LF ++R  G  PDV TY+ +++  C+ ++   A
Sbjct: 506 CY-PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSA 564

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
             + E M          C P+ VTY+ +I+GLCK G VDKA ++  +M      PN+VTY
Sbjct: 565 FKMLERMKEAK------CVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTY 618

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            ++I G C      +A  +   M  Q   P+ +T+  +++ LC   +++EA R+L  M  
Sbjct: 619 NTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKD 678

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
            G  PD  TY TLL     T  +   ++L   ME+
Sbjct: 679 KGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 21/271 (7%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GR+     +L  +L++   PD VT+ +L+KG C  S   +A  LF  +R  GCEPD  TY
Sbjct: 1348 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATY 1407

Query: 62   TTLVNG----------LCRTSHTIV--ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL 109
            TTLV            L   S ++V     L  E+++   E  +  E +      I+D  
Sbjct: 1408 TTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSS-KLEASIEVEADVRLGCAIVDMF 1466

Query: 110  CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
             K G    A+++   M  +    NVV +++++  + + K   +A  L+  M  +GV+P+ 
Sbjct: 1467 GKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDA 1522

Query: 170  VTFNVIMDELCKNGKMDEA-SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
            VTF  ++   C  G +D A    + +   +G+ P    ++ ++D     G VN A++L  
Sbjct: 1523 VTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDL-- 1580

Query: 229  SMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             M  M CK +  +++ L++ Y    + E AL
Sbjct: 1581 -MLGMPCKPSAATWNCLLSAYKICGDFERAL 1610


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 162/495 (32%), Positives = 269/495 (54%), Gaps = 33/495 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V   + +  +++++   P+ VT+ +L+ GLC    + EA  L  ++R  G +PD F+Y 
Sbjct: 92  KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYD 151

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVV---------------------------- 94
           TL+ GLC+T    +AL +FE+ +NG+    VV                            
Sbjct: 152 TLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMREN 211

Query: 95  -CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
            CEP+ VT+T ++DGLCK   + +A+++L  M+D+N  PNV+TY+S+I G C      +A
Sbjct: 212 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 271

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           + +F  M+ +G++PNVVT+N ++   C    +D A  L++ M   G  PD  TYNTL+DG
Sbjct: 272 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 331

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C TGR   A  LF  M++  C   V +YS LI G+CK + I+ A +L+ +ML + + PD
Sbjct: 332 LCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPD 391

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV  +TL  G      V+ A +L +EM  +  + D +TY + +DG CK G +VEA  +  
Sbjct: 392 VVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 451

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +    C+ ++  Y +LID  C++G+  +A +L   +    + PNV+TY  +IGG C  G
Sbjct: 452 RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTG 511

Query: 394 QMDKARDLF--LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            +++AR +   L+ +EN    ++  + +++ G  R    S  +ELL  +K+    P   I
Sbjct: 512 DLEEARKMLERLERDENCKA-DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 570

Query: 452 -VSIVVDLLAKNEIS 465
            V+++  L    E+ 
Sbjct: 571 YVALIRGLCQGKELG 585



 Score =  288 bits (737), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 248/459 (54%), Gaps = 6/459 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+        ++ K    P+  T+  LI G C   ++  A  L  +++  G  P+V TY+
Sbjct: 22  RLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYS 81

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+++G CR +    A  LF +M   NG     C PN VTY T++ GLC+ G +D+A ELL
Sbjct: 82  TVIHGFCRQTKVDTAYKLFRQMVE-NG-----CMPNLVTYNTLLSGLCRNGLMDEAYELL 135

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+++ ++P+  +Y +++ G C     + A ++F +  +    P+VV ++ ++  LCK 
Sbjct: 136 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKT 195

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++DEA +L + M ++   PD  T+  L+DG C   R+  A+++  +ME   C   V +Y
Sbjct: 196 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 255

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI+G CK  ++  A  ++  M+ +GI+P+VV +N+L  G    + V+ A  L +EM  
Sbjct: 256 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 315

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G   D  TY T IDGLCK G   EA  LF  ++   C  D+  Y+ LI G CK  R+++
Sbjct: 316 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 375

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  LF  +    ++P+VVT+S ++ G CN G +D A  L  +M  +   P+V T+  L+ 
Sbjct: 376 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           GF ++    +   +L +M +    P+    + ++D   +
Sbjct: 436 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 474



 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 155/443 (34%), Positives = 232/443 (52%), Gaps = 41/443 (9%)

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
           CE +V T+T +++GLC+ +    A   F +M       G V  PN  TY  +I+G CK  
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKK----GTV--PNEWTYNVLINGFCKVH 56

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            V +A  LL +MK+  + PNVVTY++VI GFC     + A +LF +M++ G  PN+VT+N
Sbjct: 57  KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 116

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            ++  LC+NG MDEA  LLD M + G++PD F+Y+TL+ G C TG+++ A ++F    + 
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 176

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
            C   V +YS LI G CK   ++ A  L+ +M     +PDVV    L  GL +  +++ A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI---------------- 337
            ++ + M+      +  TY + IDGLCK G + +A E+F  + +                
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 296

Query: 338 -------------------LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
                                C  DI  YN+LIDGLCK+GR   A  LF  +      P+
Sbjct: 297 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 356

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V+TYS +IGG C   ++D AR LF DM + AV+P+V+TF  L+ G+           LL 
Sbjct: 357 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 416

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
           +M   +  PD    + +VD   K
Sbjct: 417 EMVASDCSPDVYTYTSLVDGFCK 439



 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 150/443 (33%), Positives = 229/443 (51%), Gaps = 43/443 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V +++LI GLC   R+ EA  LF K+R   CEPDV T+T L++GLC+      A  +
Sbjct: 180 PDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 239

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E M + N      C PN +TY+++IDGLCK G V  A+E+  +M  + I+PNVVTY S+
Sbjct: 240 LETMEDRN------CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 293

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-------- 192
           I GFC     + A  L  EM   G  P+++T+N ++D LCK G+  EA+RL         
Sbjct: 294 IHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC 353

Query: 193 ---------------------------DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
                                      D M++  V PD  T++TL++G+C  G V+ A+ 
Sbjct: 354 NPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAER 413

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M +  C   V++Y+ L++G+CK   +  A  +   M  +G +P+VV +  L     
Sbjct: 414 LLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 473

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDI 344
              +   A+KL +EM  NGV  +  TYR+ I G C  G + EA ++   L R   C+ D+
Sbjct: 474 RAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADM 533

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            AY  ++DGLC++GR+  ALEL  ++      P    Y  +I GLC   ++ KA ++  +
Sbjct: 534 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEE 593

Query: 405 ME-ENAVVPNVITFDMLIRGFIR 426
           M       PN   ++ +I+   R
Sbjct: 594 MTLSRKSRPNAEAYEAVIQELAR 616



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 199/369 (53%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           CE N +T+T +IDGLCK   + +A     +MK K   PN  TY  +I GFC     + A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  EM + G+ PNVVT++ ++   C+  K+D A +L   M+++G  P+  TYNTLL G 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G ++ A EL   M   G +   FSY  L+ G CK  +I+ AL ++ +  +    PDV
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V ++TL  GL +  +++ A KLF++M+ N    D  T+   +DGLCK   + EA ++  T
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C  ++  Y+SLIDGLCK+G++  A E+F+ +    + PNVVTY+ +I G C    
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D A  L  +M     +P++IT++ LI G  +     +   L   MK     PD    S 
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 455 VVDLLAKNE 463
           ++    K E
Sbjct: 363 LIGGFCKLE 371



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 133/264 (50%), Gaps = 35/264 (13%)

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           M C+  V +++I+I+G CK   +  A + +++M  KG  P+   +N L  G  ++H+V R
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A+ L  EM+ +G+A +  TY T I G C+   +  A +LF  +    C  ++  YN+L+ 
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 353 -----------------------------------GLCKSGRLEIALELFRSLPCGVLVP 377
                                              GLCK+G++++AL++F     G   P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +VV YS +I GLC  G++D+A  LF  M EN+  P+V+TF  L+ G  + +   +  ++L
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240

Query: 438 HKMKEINVMPDASIVSIVVDLLAK 461
             M++ N  P+    S ++D L K
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCK 264



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 6/197 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     VL R+ K    P+ VT+T+LI   C   +   A  L  ++   G +P+V T
Sbjct: 440 VGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVIT 499

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+ G C T     A  + E +          C+ +   Y  ++DGLC+ G +  A E
Sbjct: 500 YRSLIGGFCGTGDLEEARKMLERLERDEN-----CKADMFAYRVMMDGLCRTGRMSAALE 554

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM-MDQGVQPNVVTFNVIMDEL 179
           LL  +K     P    Y ++IRG C  K+  +A  +  EM + +  +PN   +  ++ EL
Sbjct: 555 LLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQEL 614

Query: 180 CKNGKMDEASRLLDLMI 196
            + G+ +EA+ L D ++
Sbjct: 615 AREGRHEEANALADELL 631


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 161/464 (34%), Positives = 252/464 (54%), Gaps = 9/464 (1%)

Query: 3   RVSH---GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           R++H   GF VLG + K    P  VTFT+++ GLC E  + +A      L+  G E D +
Sbjct: 73  RLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRY 132

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           T   ++NGLC+  H+  AL+  ++M   N      C  +   Y+ ++DGLCK+G V +A 
Sbjct: 133 TRGAIINGLCKVGHSSAALSYLKKMEEQN------CNLDVTAYSAVVDGLCKDGMVFEAL 186

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L  QM  K I+PN+ TY  +I G C    W EA  L   MM +G+ P+V TFNVI    
Sbjct: 187 DLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRF 246

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K G +  A  +   M   G+  +  TYN+++   C+  ++  A E+F  M   GC   +
Sbjct: 247 LKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNI 306

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+G+C+ K +  A+    EM++ G+ PDVV  +TL  G  +  +   A +LF  
Sbjct: 307 VTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFV 366

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M ++G   D  T    +DGL K  +  EA+ LF  L  +  + DI  Y+ +++G+C SG+
Sbjct: 367 MHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGK 426

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  ALELF  L    +  +VVTY+IMI GLC +G +D A DL + MEEN   P+  T+++
Sbjct: 427 LNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNV 486

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            ++G +R  E SK  + L  MK      +A+   ++++  + N+
Sbjct: 487 FVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANK 530



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 162/349 (46%), Gaps = 35/349 (10%)

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           K +  A  L   M   GV+PNV T N++++ LC+         +L LM + GV P   T+
Sbjct: 40  KHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTF 99

Query: 208 NTLLDGFCLTGR-------VNHAKEL----------------------------FVSMES 232
            T+++G C+ G        V+H K++                               ME 
Sbjct: 100 TTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEE 159

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
             C   V +YS +++G CK+  +  AL L+S+M  KGI+P++  +N L  GL    + + 
Sbjct: 160 QNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKE 219

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  L   M R G+  D  T+        K G I  A  +F  +  +  E ++  YNS+I 
Sbjct: 220 AAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIG 279

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
             C   +++ A+E+F  +     +PN+VTY+ +I G C    M+KA     +M  N + P
Sbjct: 280 AHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDP 339

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +V+T+  LI GF +  +P    EL   M +   +PD    +I++D L K
Sbjct: 340 DVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFK 388



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 127/241 (52%), Gaps = 7/241 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I K C  P+ VT+ SLI G C    + +A     ++   G +PDV T++TL+ G C+   
Sbjct: 298 IRKGCL-PNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGK 356

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
            + A  LF  M + +G+      P+  T   I+DGL K  F  +A  L  +++  N   +
Sbjct: 357 PVAAKELFFVM-HKHGQL-----PDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLD 410

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           ++ Y+ ++ G C +   N+A  LF  +  +GV+ +VVT+N++++ LCK G +D+A  LL 
Sbjct: 411 IIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLM 470

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M ++G  PD  TYN  + G      ++ + +  + M+  G +    +  +LIN +  NK
Sbjct: 471 KMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANK 530

Query: 254 E 254
           E
Sbjct: 531 E 531



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 7/247 (2%)

Query: 214 FCLTGRVNH---AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           F +  ++ H   A  L   M  +G K  V +++I+IN  C+        S+   M   G+
Sbjct: 33  FGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGV 92

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +P +V   T+  GL     V +A +  D ++  G  +D +T    I+GLCK G+   A+ 
Sbjct: 93  EPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALS 152

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
               +    C  D+ AY++++DGLCK G +  AL+LF  +    + PN+ TY+ +I GLC
Sbjct: 153 YLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLC 212

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL----HKMKEINVM 446
           N  +  +A  L  +M    ++P+V TF+++   F++    S+   +     H   E NV+
Sbjct: 213 NFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVV 272

Query: 447 PDASIVS 453
              SI+ 
Sbjct: 273 TYNSIIG 279



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 101/260 (38%), Gaps = 37/260 (14%)

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           K ++ AL  Y +M++    P V   N LF  + ++     A  L   M   GV  +  T+
Sbjct: 5   KSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTH 64

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP- 371
              I+ LC+  + V    +   +  +  E  I  + ++++GLC  G +  A+     L  
Sbjct: 65  NIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKD 124

Query: 372 ---------CGVLVP-------------------------NVVTYSIMIGGLCNDGQMDK 397
                     G ++                          +V  YS ++ GLC DG + +
Sbjct: 125 MGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFE 184

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A DLF  M    + PN+ T++ LI G    +   +   LL  M    +MPD    +++  
Sbjct: 185 ALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAG 244

Query: 458 LLAKNEI--SLNSLPSFTVH 475
              K  +     S+ SF  H
Sbjct: 245 RFLKTGMISRAKSIFSFMGH 264


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 176/516 (34%), Positives = 273/516 (52%), Gaps = 64/516 (12%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++       G+I K  F P  VTF++L+ GLC E RI EA  LF ++    C+P+V T+T
Sbjct: 128 KLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFT 183

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NGLCR    + A+ L + M     E G+  +PN +TY TI+DG+CK G    A  LL
Sbjct: 184 TLMNGLCREGRVVEAVALLDRML----EDGL--QPNQITYGTIVDGMCKMGDTVSALNLL 237

Query: 123 LQMKD-KNIKPNVVTY-----TSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVI 175
            +M++  +IKPNVV +     T +I GFC +  W+EA++L  EM++ + + P+VVT+N +
Sbjct: 238 RKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNAL 297

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++   K GK  EA  L D M+  G+ P   TY++++DGFC   R++ A+ +F  M + GC
Sbjct: 298 INAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 357

Query: 236 KHTVFSYSILINGYCKNKEIE-----------------------------------GALS 260
              + +++ LI GYC+ K ++                                    A  
Sbjct: 358 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQD 417

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR-----------NGVAADT 309
           L  EM+S G+ P+VV  NTL  GL +  +++ A ++F  MQ+           NGV  D 
Sbjct: 418 LLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDV 477

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I GL   G  +EA EL+  +       D   YNS+I GLCK  RL+ A ++F S
Sbjct: 478 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDS 537

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +      PNVVT++ +I G C  G++D   +LF +M    +V N IT+  LI GF ++  
Sbjct: 538 MGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGN 597

Query: 430 PSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEI 464
            +  +++  +M    V PD  +I +++  L +K E+
Sbjct: 598 INGALDIFQEMMASGVYPDTITIRNMLTGLWSKEEL 633



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 191/385 (49%), Gaps = 18/385 (4%)

Query: 2   GRVSHGFVVLGRIL-KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           GR S    +L  +L +   +PD VT+ +LI     E +  EA  L+ ++   G  P   T
Sbjct: 269 GRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTIT 328

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+++++G C+ +    A ++F  MA         C P+ +T+ T+I G C+   VD   +
Sbjct: 329 YSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPDIITFNTLIAGYCRAKRVDDGIK 382

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M +  +  N +TYT++I GFC   D N A+ L  EM+  GV PNVVT N ++D LC
Sbjct: 383 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLC 442

Query: 181 KNGKMDEASRLLDLMIQ-----------HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
            NGK+ +A  +   M +           +GV PD  TYN L+ G    G+   A+EL+  
Sbjct: 443 DNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 502

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G      +Y+ +I+G CK   ++ A  ++  M SK   P+VV   TL  G  +  +
Sbjct: 503 MPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 562

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V+   +LF EM R G+ A+  TY T I G  K G I  A+++F  +       D     +
Sbjct: 563 VDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRN 622

Query: 350 LIDGLCKSGRLEIALELFRSLPCGV 374
           ++ GL     L+ A+ +   L   V
Sbjct: 623 MLTGLWSKEELKRAVAMLEDLQMSV 647



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 199/402 (49%), Gaps = 17/402 (4%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P V  +  L+  + R     V ++L  +M        V C  N  ++T ++   C    +
Sbjct: 76  PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR----VPC--NAYSFTILMKCFCSCSKL 129

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A     ++      P VVT+++++ G C     +EA  LF +M     +PNVVTF  +
Sbjct: 130 PFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTL 185

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG- 234
           M+ LC+ G++ EA  LLD M++ G++P+  TY T++DG C  G    A  L   ME +  
Sbjct: 186 MNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH 245

Query: 235 CKHTVFSYSI-----LINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIHNTLFVGLFEIH 288
            K  V  + +     +ING+C +     A  L  EML  K I PDVV +N L     +  
Sbjct: 246 IKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEG 305

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           +   A +L+DEM   G+   T TY + IDG CK   +  A  +F+ +    C  DI  +N
Sbjct: 306 KFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFN 365

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +LI G C++ R++  ++L   +    LV N +TY+ +I G C  G ++ A+DL  +M  +
Sbjct: 366 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS 425

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            V PNV+T + L+ G     +    +E+   M++  +  DAS
Sbjct: 426 GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 467



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 189/397 (47%), Gaps = 12/397 (3%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ + +  ++  + + G +D    L  +M+ + +  N  ++T +++ FC       A   
Sbjct: 76  PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALST 135

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F ++   G  P VVTF+ ++  LC   ++ EA   LDL  Q   +P+  T+ TL++G C 
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEA---LDLFHQM-CKPNVVTFTTLMNGLCR 191

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVV 275
            GRV  A  L   M   G +    +Y  +++G CK  +   AL+L  +M     IKP+VV
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251

Query: 276 I-----HNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           I        +  G     +   A +L  EM +R  ++ D  TY   I+   K G   EA 
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           EL+  +           Y+S+IDG CK  RL+ A  +F  +      P+++T++ +I G 
Sbjct: 312 ELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY 371

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C   ++D    L  +M E  +V N IT+  LI GF ++ + +   +LL +M    V P+ 
Sbjct: 372 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNV 431

Query: 450 SIVSIVVDLLAKNEISLNSLPSFTVHEQQE-EVDESN 485
              + ++D L  N    ++L  F   ++ + ++D S+
Sbjct: 432 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASH 468



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 155/349 (44%), Gaps = 48/349 (13%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF   K   +A  LF +M+     P+V+ F  +M  + + G++D    L   M    V  
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           +A+++  L+  FC   ++  A   F  +  +G   TV ++S L++G C    I  AL L+
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M     KP+VV   TL  GL    +V  A  L D M  +G+  +  TY T +DG+CK 
Sbjct: 172 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227

Query: 323 GYIVEAVELFHTLRIL------------------------------------------KC 340
           G  V A+ L   +  +                                          K 
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI 287

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
             D+  YN+LI+   K G+   A EL+   LP G+ +P+ +TYS MI G C   ++D A 
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI-IPSTITYSSMIDGFCKQNRLDAAE 346

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +F  M      P++ITF+ LI G+ R       I+LLH+M E  ++ +
Sbjct: 347 HMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 395



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 105/208 (50%), Gaps = 5/208 (2%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G+ + K +E A+ L+ +M+     P V+    L   +  + +++    L  +M+   
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           V  + +++   +   C    +  A+  F  +  L     +  +++L+ GLC   R+  AL
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +LF  +      PNVVT++ ++ GLC +G++ +A  L   M E+ + PN IT+  ++ G 
Sbjct: 169 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 425 IRINEPSKVIELLHKMKEI-NVMPDASI 451
            ++ +    + LL KM+E+ ++ P+  I
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVI 252


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  298 bits (763), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 162/495 (32%), Positives = 268/495 (54%), Gaps = 33/495 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V   + +  +++++   P+ VT+ +L+ GLC    + EA  L  ++R  G +PD F+Y 
Sbjct: 211 KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYD 270

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVV---------------------------- 94
           TL+ GLC+T    +AL +FE+ +NG+    VV                            
Sbjct: 271 TLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMREN 330

Query: 95  -CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
            CEP+ VT+T ++DGLCK   + +A+++L  M+D+N  PNV+TY+S+I G C      +A
Sbjct: 331 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 390

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           + +F  M+ +G++PNVVT+N ++   C    +D A  L++ M   G  PD  TYNTL+DG
Sbjct: 391 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 450

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C TGR   A  LF  M++  C   V +YS LI G+CK + I+ A +L+ +ML + + PD
Sbjct: 451 LCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPD 510

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV  +TL  G      V+ A +L +EM  +  + D +TY + +DG CK G +VEA  +  
Sbjct: 511 VVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 570

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +    C+ ++  Y +LID  C++G+  +A  L   +    + PNV+TY  +IGG C  G
Sbjct: 571 RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTG 630

Query: 394 QMDKARDLF--LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            +++AR +   L+ +EN    ++  + +++ G  R    S  +ELL  +K+    P   I
Sbjct: 631 DLEEARKILERLERDENCKA-DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 689

Query: 452 -VSIVVDLLAKNEIS 465
            V+++  L    E+ 
Sbjct: 690 YVALIRGLCQGKELG 704



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 248/459 (54%), Gaps = 6/459 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+        ++ K    P+  T+  LI G C   ++  A  L  +++  G  P+V TY+
Sbjct: 141 RLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYS 200

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+++G CR +    A  LF +M   NG     C PN VTY T++ GLC+ G +D+A ELL
Sbjct: 201 TVIHGFCRQTKVDTAYKLFRQMVE-NG-----CMPNLVTYNTLLSGLCRNGLMDEAYELL 254

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+++ ++P+  +Y +++ G C     + A ++F +  +    P+VV ++ ++  LCK 
Sbjct: 255 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKA 314

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++DEA +L + M ++   PD  T+  L+DG C   R+  A+++  +ME   C   V +Y
Sbjct: 315 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI+G CK  ++  A  ++  M+ +GI+P+VV +N+L  G    + V+ A  L +EM  
Sbjct: 375 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 434

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G   D  TY T IDGLCK G   EA  LF  ++   C  D+  Y+ LI G CK  R+++
Sbjct: 435 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 494

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  LF  +    ++P+VVT+S ++ G CN G +D A  L  +M  +   P+V T+  L+ 
Sbjct: 495 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 554

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           GF ++    +   +L +M +    P+    + ++D   +
Sbjct: 555 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 593



 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 167/495 (33%), Positives = 251/495 (50%), Gaps = 44/495 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L  + +S   PDA  +  +I  LC      +A   F   R   CE +V T+
Sbjct: 73  GDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYF---RSMECEKNVITW 129

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +++GLC+ +    A   F +M       G V  PN  TY  +I+G CK   V +A  L
Sbjct: 130 TIMIDGLCKANRLPEATTYFAKMKKK----GTV--PNEWTYNVLINGFCKVHKVHRAYLL 183

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK+  + PNVVTY++VI GFC     + A +LF +M++ G  PN+VT+N ++  LC+
Sbjct: 184 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 243

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG MDEA  LLD M + G++PD F+Y+TL+ G C TG+++ A ++F    +  C   V +
Sbjct: 244 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 303

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI G CK   ++ A  L+ +M     +PDVV    L  GL +  +++ A ++ + M+
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI------------------------ 337
                 +  TY + IDGLCK G + +A E+F  + +                        
Sbjct: 364 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 423

Query: 338 -----------LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
                        C  DI  YN+LIDGLCK+GR   A  LF  +      P+V+TYS +I
Sbjct: 424 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 483

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
           GG C   ++D AR LF DM + AV+P+V+TF  L+ G+           LL +M   +  
Sbjct: 484 GGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS 543

Query: 447 PDASIVSIVVDLLAK 461
           PD    + +VD   K
Sbjct: 544 PDVYTYTSLVDGFCK 558



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 151/444 (34%), Positives = 234/444 (52%), Gaps = 9/444 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP+  T+  +I+GLC    + +A  L  ++R  G  PD   Y  +++ LC+  +T  AL+
Sbjct: 56  TPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALD 115

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            F  M          CE N +T+T +IDGLCK   + +A     +MK K   PN  TY  
Sbjct: 116 YFRSME---------CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNV 166

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I GFC     + A  L  EM + G+ PNVVT++ ++   C+  K+D A +L   M+++G
Sbjct: 167 LINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG 226

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TYNTLL G C  G ++ A EL   M   G +   FSY  L+ G CK  +I+ AL
Sbjct: 227 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 286

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++ +  +    PDVV ++TL  GL +  +++ A KLF++M+ N    D  T+   +DGL
Sbjct: 287 KVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 346

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   + EA ++  T+    C  ++  Y+SLIDGLCK+G++  A E+F+ +    + PNV
Sbjct: 347 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 406

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTY+ +I G C    +D A  L  +M     +P++IT++ LI G  +     +   L   
Sbjct: 407 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 466

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           MK     PD    S ++    K E
Sbjct: 467 MKAKFCNPDVITYSCLIGGFCKLE 490



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/443 (33%), Positives = 229/443 (51%), Gaps = 43/443 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V +++LI GLC   R+ EA  LF K+R   CEPDV T+T L++GLC+      A  +
Sbjct: 299 PDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 358

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E M + N      C PN +TY+++IDGLCK G V  A+E+  +M  + I+PNVVTY S+
Sbjct: 359 LETMEDRN------CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 412

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-------- 192
           I GFC     + A  L  EM   G  P+++T+N ++D LCK G+  EA+RL         
Sbjct: 413 IHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC 472

Query: 193 ---------------------------DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
                                      D M++  V PD  T++TL++G+C  G V+ A+ 
Sbjct: 473 NPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAER 532

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M +  C   V++Y+ L++G+CK   +  A  +   M  +G +P+VV +  L     
Sbjct: 533 LLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 592

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDI 344
              +   A++L +EM  NGV  +  TYR+ I G C  G + EA ++   L R   C+ D+
Sbjct: 593 RAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADM 652

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            AY  ++DGLC++GR+  ALEL  ++      P    Y  +I GLC   ++ KA ++  +
Sbjct: 653 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEE 712

Query: 405 ME-ENAVVPNVITFDMLIRGFIR 426
           M       PN   ++ +I+   R
Sbjct: 713 MTLSRKSRPNAEAYEAVIQELAR 735



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 194/364 (53%), Gaps = 3/364 (0%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  TY  + + L +   +D+   +L       I PNV TY  VI+G C + D ++A  L 
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM + G  P+   +N ++  LC   K    ++ LD         +  T+  ++DG C  
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALC---KARNTAKALDYFRSMECEKNVITWTIMIDGLCKA 139

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
            R+  A   F  M+  G     ++Y++LING+CK  ++  A  L  EM   G+ P+VV +
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           +T+  G     +V+ A+KLF +M  NG   +  TY T + GLC+NG + EA EL   +R 
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              + D  +Y++L+ GLCK+G++++AL++F     G   P+VV YS +I GLC  G++D+
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDE 319

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  LF  M EN+  P+V+TF  L+ G  + +   +  ++L  M++ N  P+    S ++D
Sbjct: 320 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 379

Query: 458 LLAK 461
            L K
Sbjct: 380 GLCK 383



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 6/197 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     VL R+ K    P+ VT+T+LI   C   +   A  L  ++   G +P+V T
Sbjct: 559 VGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVIT 618

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+ G C T     A  + E +          C+ +   Y  ++DGLC+ G +  A E
Sbjct: 619 YRSLIGGFCGTGDLEEARKILERLERDEN-----CKADMFAYRVMMDGLCRTGRMSAALE 673

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM-MDQGVQPNVVTFNVIMDEL 179
           LL  +K     P    Y ++IRG C  K+  +A  +  EM + +  +PN   +  ++ EL
Sbjct: 674 LLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQEL 733

Query: 180 CKNGKMDEASRLLDLMI 196
            + G+ +EA+ L D ++
Sbjct: 734 AREGRHEEANALADELL 750



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 53/104 (50%)

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           NV TY+ +   L    ++D+   +  +     + PNV T+ ++I+G  +  +  K  ELL
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
            +M+E   +PDA+I + V+  L K   +  +L  F   E ++ V
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNV 126


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/429 (36%), Positives = 244/429 (56%), Gaps = 6/429 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F VLG +LK  + P+ +T T+++KGLC    + +A      +   G   D   
Sbjct: 132 LGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVC 191

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   +I A  L +EM       G V +PN V Y  IID  CK+    KA++
Sbjct: 192 YGTLINGLCKIGRSIDAFQLLQEME------GQVVKPNIVIYNMIIDSFCKDELTCKARD 245

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L++ D  I P+++TYTS+IRGFC    W E K+L  EM+++ + PNV TFNV++D  C
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + GKM EA  + +LM++ G +PD  T+NTL+ G CL G V  A++LF ++   G    V+
Sbjct: 306 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 365

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILI GYCK K I+ A+SL++EM  K +  D+V++++L  GL +  ++  A++LF  +
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G   +  TY   ID  CK   I   +ELF  +        +  YN LI+G CKS R+
Sbjct: 426 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A+ L   +    L P+ +TY+ +  GLC  G++  A +LF  M       +V T+++L
Sbjct: 486 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVL 545

Query: 421 IRGFIRINE 429
           +  F +  +
Sbjct: 546 LDAFCKAQD 554



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/446 (31%), Positives = 227/446 (50%), Gaps = 14/446 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  + F ++I  +        A +L  ++   G  P +FT +  +N  C           
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLG-------- 133

Query: 81  FEEMANGNGEFGVVC----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
             EM       G+V     +PN +T TT++ GLC  G V KA +    +  + +  + V 
Sbjct: 134 --EMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVC 191

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y ++I G C      +A +L  EM  Q V+PN+V +N+I+D  CK+    +A  L   ++
Sbjct: 192 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 251

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+ PD  TY +L+ GFC TG+    K+L   M +      V+++++LI+ +C+  ++ 
Sbjct: 252 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 311

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  +++ M+ +G +PD+V  NTL  G      V  A KLFD +   G+  D W+Y   I
Sbjct: 312 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 371

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            G CK   I EAV LF+ +R      DI  Y+SLIDGLCKSGR+  A ELF ++      
Sbjct: 372 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPP 431

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PNV+TY+I+I   C    +D   +LF  M    + P V+T+++LI G+ +     + + L
Sbjct: 432 PNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNL 491

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
           L  M+  N+ PD+   + + D L K+
Sbjct: 492 LSVMQSKNLAPDSITYNSLFDGLCKS 517



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 232/445 (52%), Gaps = 8/445 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP   T +  I   C    +  A ++   +   G +P+  T TT++ GLC       A++
Sbjct: 116 TPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMD 175

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
             + +A        VC      Y T+I+GLCK G    A +LL +M+ + +KPN+V Y  
Sbjct: 176 FHDNVAAQGMLLDEVC------YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNM 229

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I  FC  +   +A+ L+++++D G+ P+++T+  ++   C+ G+  E  +L+  M+   
Sbjct: 230 IIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKN 289

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+ +T+N L+D FC  G++  A+ +F  M   G +  + +++ LI+G+C +  +  A 
Sbjct: 290 INPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEAR 349

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  +  +GI PDV  +  L +G  +  +++ A  LF+EM+   +  D   Y + IDGL
Sbjct: 350 KLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 409

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV-LVPN 378
           CK+G I  A ELF T+       ++  YN LID  CK   +++ +ELF+ L CG  L P 
Sbjct: 410 CKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFK-LMCGKGLTPT 468

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V+TY+I+I G C   ++ +A +L   M+   + P+ IT++ L  G  +    S   EL  
Sbjct: 469 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFK 528

Query: 439 KMKEINVMPDASIVSIVVDLLAKNE 463
            M       D +  ++++D   K +
Sbjct: 529 VMHVGGPPVDVATYNVLLDAFCKAQ 553



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 231/482 (47%), Gaps = 13/482 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+ + F    R    C   +A   +S        + I +A  LF  L      P V  + 
Sbjct: 36  RLRYAFHKFLRFFSHCPKQNAKILSSF-------NGIDDAVTLFNHLINMQPLPSVIQFN 88

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T++  + +  H  VA++L ++M       GV   P+  T +  I+  C  G +  A  +L
Sbjct: 89  TIIGSVVKMKHCPVAISLLKQMVFK----GVT--PSIFTLSIWINCYCHLGEMGFAFSVL 142

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             +  +  +PN +T T+V++G C   +  +A      +  QG+  + V +  +++ LCK 
Sbjct: 143 GIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKI 202

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+  +A +LL  M    V+P+   YN ++D FC       A++L++ +  MG    + +Y
Sbjct: 203 GRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTY 262

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+C+  +      L  EM++K I P+V   N L        ++  A  +F+ M +
Sbjct: 263 TSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVK 322

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G   D  T+ T I G C +G ++EA +LF T+       D+ +Y  LI G CK  R++ 
Sbjct: 323 RGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDE 382

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+ LF  + C  +V ++V YS +I GLC  G++  A +LF  +  +   PNVIT+++LI 
Sbjct: 383 AVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILID 442

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
            F +I +    IEL   M    + P     +I+++   K++    ++   +V + +    
Sbjct: 443 AFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAP 502

Query: 483 ES 484
           +S
Sbjct: 503 DS 504



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 134/235 (57%), Gaps = 6/235 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTF +LI G C    ++EA  LF  +   G  PDV++YT L+ G C+      A++L
Sbjct: 327 PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSL 386

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM   N    +V       Y+++IDGLCK G +  A EL   + +    PNV+TY  +
Sbjct: 387 FNEMRCKNMVLDIV------LYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNIL 440

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I  FC  +D +    LF  M  +G+ P V+T+N++++  CK+ ++ EA  LL +M    +
Sbjct: 441 IDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNL 500

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            PD+ TYN+L DG C +GR++ A ELF  M   G    V +Y++L++ +CK +++
Sbjct: 501 APDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/471 (33%), Positives = 259/471 (54%), Gaps = 8/471 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR +    +   +++    P+   +  L+ G   E  + E  +    +   G  PD   +
Sbjct: 286 GRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIF 345

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +     + +    A+++F++M            PN VTY  +ID LCK G VD A   
Sbjct: 346 NIMFCAYAKKAMIDEAMHIFDKMRQQR------LSPNIVTYGALIDALCKLGRVDDAVLK 399

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM D+ + P++  ++S++ G C    W +A+ LF E++DQG++ + V FN +M  LC+
Sbjct: 400 FNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCR 459

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA RL+DLM++ GVRPD  +YNTL+DG CLTGR++ A +L   + S+G K    +
Sbjct: 460 EGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVT 519

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++GYCK + I+ A SL+ EML KG+ PDVV +NT+  GLF+  +   A +L+  M 
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 579

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +    + +TY   I+GLCKN ++ EA ++FH+L     + DI   N +I  L K GR E
Sbjct: 580 NSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKE 639

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++LF ++    LVP+V TY ++   L  +G +++  +LF  MEEN   PN    + L+
Sbjct: 640 DAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS--LNSLP 470
           R  +   + ++    L K+ E N   +AS  S+++ + ++ E      SLP
Sbjct: 700 RWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSLP 750



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 158/500 (31%), Positives = 255/500 (51%), Gaps = 42/500 (8%)

Query: 1   MGRVSHGFVVLGRILKSCF-TPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDV 58
           MGR+ HGF   G ILK+ +   D V F+ L+KGLC   R+ EA   L  ++  FGC PDV
Sbjct: 105 MGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDV 164

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           F+Y+ L+ G C       AL L   MA +G+G       PN VTYTT+IDGLCK   VD+
Sbjct: 165 FSYSILLKGFCNEKRAEEALELLSMMADDGDGSH----TPNVVTYTTVIDGLCKAQMVDR 220

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           AK +   M DK ++PN  TYT +I G+     W E  ++  EM   G+QP+   + V++D
Sbjct: 221 AKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLD 280

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR------------------ 219
            LCKNG+  EA  + D +I+ G++P+   Y  LL G+   G                   
Sbjct: 281 YLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSP 340

Query: 220 -----------------VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
                            ++ A  +F  M        + +Y  LI+  CK   ++ A+  +
Sbjct: 341 DHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKF 400

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           ++M+ +G+ PD+ + ++L  GL  + + E+A +LF E+   G+  DT  + T +  LC+ 
Sbjct: 401 NQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCRE 460

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G ++EA  L   +  +    D+ +YN+L+DG C +GR++ A +L   +    L P+ VTY
Sbjct: 461 GRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTY 520

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++ G C   ++D A  LF +M    + P+V+T++ ++ G  +    S+  EL   M  
Sbjct: 521 NTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN 580

Query: 443 INVMPDASIVSIVVDLLAKN 462
                +    +I+++ L KN
Sbjct: 581 SRTQMNIYTYNIIINGLCKN 600



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 210/432 (48%), Gaps = 44/432 (10%)

Query: 56  PDVFTYTTLVNGLCRTS---HTIVALNL-------------FEEMANG------------ 87
           P  FTYT L+   CR     H   A  L             F ++  G            
Sbjct: 90  PSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATD 149

Query: 88  -----NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---NIKPNVVTYTS 139
                  EFG  C P+  +Y+ ++ G C E   ++A ELL  M D    +  PNVVTYT+
Sbjct: 150 ILLRRMPEFG--CTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTT 207

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           VI G C A+  + AK +F  M+D+GV+PN  T+  ++      GK  E  ++L  M  HG
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           ++PD + Y  LLD  C  GR   A+ +F S+   G K  V  Y IL++GY     +    
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           S    M+  G+ PD  I N +F    +   ++ A  +FD+M++  ++ +  TY   ID L
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDAL 387

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G + +AV  F+ +       DI  ++SL+ GLC   + E A ELF  +    +  + 
Sbjct: 388 CKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDT 447

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIEL 436
           V ++ ++  LC +G++ +A+ L   M    V P+VI+++ L+ G     RI+E +K++++
Sbjct: 448 VFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDV 507

Query: 437 LHKMKEINVMPD 448
           +     I + PD
Sbjct: 508 I---VSIGLKPD 516



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 206/460 (44%), Gaps = 46/460 (10%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCR---TSHTIVALNLFEEMANGNGEFGVVCEP 97
           +A  LF ++        V  +  L+  + R   +S + + ++LF  M     E  +   P
Sbjct: 34  DALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIR---ECSIKVAP 90

Query: 98  NTVTYTTII------------------------------------DGLCKEGFVDKAKEL 121
           ++ TYT +I                                     GLC    VD+A ++
Sbjct: 91  SSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDI 150

Query: 122 LL-QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---VQPNVVTFNVIMD 177
           LL +M +    P+V +Y+ +++GFC  K   EA  L   M D G     PNVVT+  ++D
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LCK   +D A  +   MI  GVRP+  TY  L+ G+   G+     ++   M + G + 
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
             + Y++L++  CKN     A +++  ++ KGIKP+V I+  L  G      +       
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           D M  NGV+ D   +        K   I EA+ +F  +R  +   +I  Y +LID LCK 
Sbjct: 331 DLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKL 390

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GR++ A+  F  +    + P++  +S ++ GLC   + +KA +LF ++ +  +  + + F
Sbjct: 391 GRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFF 450

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + L+    R     +   L+  M  + V PD    + +VD
Sbjct: 451 NTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVD 490



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 168/328 (51%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV    +   +++    TPD   F+SL+ GLC   +  +A  LF ++   G   D   
Sbjct: 390 LGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVF 449

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + TL+  LCR    + A  L + M        V   P+ ++Y T++DG C  G +D+A +
Sbjct: 450 FNTLMCNLCREGRVMEAQRLIDLM------LRVGVRPDVISYNTLVDGHCLTGRIDEAAK 503

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  +    +KP+ VTY +++ G+C A+  ++A  LF EM+ +G+ P+VVT+N I+  L 
Sbjct: 504 LLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLF 563

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+  EA  L   MI    + + +TYN +++G C    V+ A ++F S+ S   +  +F
Sbjct: 564 QTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIF 623

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +I+I    K    E A+ L++ + + G+ PDV  +  +   L +   +E   +LF  M
Sbjct: 624 TANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAM 683

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           + NG A ++      +  L   G I  A
Sbjct: 684 EENGTAPNSRMLNALVRWLLHRGDINRA 711



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 13/341 (3%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR-------PD 203
           N+A +LF EM+      +V  FN ++  + +  +   AS L+  +    +R       P 
Sbjct: 33  NDALKLFDEMLTHARPASVRAFNQLLTAVSR-ARCSSASELVVSLFNRMIRECSIKVAPS 91

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK-HTVFSYSILINGYCKNKEIEGALS-L 261
           +FTY  L+  FC  GR+ H    F  +   G + +    +S L+ G C  K ++ A   L
Sbjct: 92  SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT---WTYRTFIDG 318
              M   G  PDV  ++ L  G     + E A +L   M  +G  + T    TY T IDG
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK   +  A  +F  +       +   Y  LI G    G+ +  +++ + +    L P+
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
              Y++++  LC +G+  +AR++F  +    + PNV  + +L+ G+      S++   L 
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
            M    V PD  I +I+    AK  +   ++  F    QQ 
Sbjct: 332 LMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR 372


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 161/486 (33%), Positives = 260/486 (53%), Gaps = 31/486 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+       L ++      P+ VT++SL+  LC   R  EA  +F  +   G EPD+ TY
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 344

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGV-VC------------------- 95
            TL+ G   T   +V ++   ++   NG       F + +C                   
Sbjct: 345 RTLLQGYA-TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403

Query: 96  ----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                PN V Y T+ID LCK G VD A     QM D+ + PN++ YTS+I G C    W+
Sbjct: 404 QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWD 463

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A+ L +EM+D+G+  N + FN I+D  CK G++ E+ +L DLM++ GV+PD  TYNTL+
Sbjct: 464 KAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG CL G+++ A +L  SM S+G K  + +Y  LINGYC+   ++ AL+L+ EM+S G+ 
Sbjct: 524 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 583

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P+++ +N +  GLF   +   A +L+  + ++G   +  TY   + GLCKN    EA+ +
Sbjct: 584 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  L +   + + R +N +I  L K GR++ A +LF +     LVP+V TYS+M   L  
Sbjct: 644 FQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIE 703

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G +++  DLFL MEEN    +    + ++R  ++  + ++    L  + E +   +AS 
Sbjct: 704 QGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEAST 763

Query: 452 VSIVVD 457
            S +++
Sbjct: 764 ASFLLE 769



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 162/541 (29%), Positives = 270/541 (49%), Gaps = 72/541 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+TFT L+KGLCA+ R  +A  +   ++   GC PDVF+
Sbjct: 106 GRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFS 165

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNG------------------------------- 89
           Y  L+ GLC  + +  AL L   MA+  G                               
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYH 225

Query: 90  ---EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
              + G++  P+ VTY++II  LCK   +DKA E+L  M    + P+ +TY S++ G+C 
Sbjct: 226 EMLDRGIL--PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 283

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           +    EA     +M   GV+PNVVT++ +M+ LCKNG+  EA ++ D M + G+ PD  T
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 343

Query: 207 YNTLLDGFCLTG-----------------------------------RVNHAKELFVSME 231
           Y TLL G+   G                                   +V+ A  +F  M 
Sbjct: 344 YRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G    V  Y  +I+  CK+  ++ A+  + +M+ +G+ P+++++ +L  GL    + +
Sbjct: 404 QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWD 463

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           +A +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +  +  + DI  YN+LI
Sbjct: 464 KAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG C +G+++ A +L  S+    + P++VTY  +I G C   +MD A  LF +M  + V 
Sbjct: 524 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 583

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
           PN+IT++++++G       +   EL   + +     + S  +I++  L KN ++  +L  
Sbjct: 584 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643

Query: 472 F 472
           F
Sbjct: 644 F 644



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 261/556 (46%), Gaps = 77/556 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     +     +L     PD VT++S+I  LC    + +A  +   +   G  PD  TY
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C +     A+   ++M +     GV  EPN VTY+++++ LCK G   +A+++
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSD----GV--EPNVVTYSSLMNYLCKNGRSTEARKI 328

Query: 122 LLQMKDKNIKPNVVTYTSVIRGF---------------------------------CYAK 148
              M  + ++P++ TY ++++G+                                  YAK
Sbjct: 329 FDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAK 388

Query: 149 DW--NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
               ++A  +F +M   G+ PNVV +  ++D LCK+G +D+A    + MI  G+ P+   
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448

Query: 207 Y-----------------------------------NTLLDGFCLTGRVNHAKELFVSME 231
           Y                                   N+++D  C  GRV  +++LF  M 
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
            +G K  + +Y+ LI+G C   +++ A  L + M+S G+KPD+V + TL  G   + +++
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 568

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A  LF EM  +GV+ +  TY   + GL        A EL+ ++     + ++  YN ++
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 628

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GLCK+   + AL +F++L    L     T++IMIG L   G+MD+A+DLF     N +V
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV-SIVVDLLAKNEISLNSLP 470
           P+V T+ ++    I      ++ +L   M+E     D+ ++ SIV  LL + +I+     
Sbjct: 689 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 748

Query: 471 SFTVHEQQEEVDESNV 486
            F + E+   ++ S  
Sbjct: 749 LFMIDEKHFSLEASTA 764



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 221/444 (49%), Gaps = 14/444 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP   T+  LI   C   R+    A    +   G   D  T+T L+ GLC    T  A++
Sbjct: 89  TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMD 148

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---NIKPNVVT 136
           +         E G  C P+  +Y  ++ GLC E    +A ELL  M D       P+VV+
Sbjct: 149 IVLRRMT---ELG--CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 203

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y +V+ GF    D ++A   + EM+D+G+ P+VVT++ I+  LCK   MD+A  +L+ M+
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV 263

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           ++GV PD  TYN++L G+C +G+   A      M S G +  V +YS L+N  CKN    
Sbjct: 264 KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRST 323

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  ++  M  +G++PD+  + TL  G      +     L D M RNG+  D   +   I
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
               K   + +A+ +F  +R      ++  Y ++ID LCKSG ++ A+  F  +    L 
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKV 433
           PN++ Y+ +I GLC   + DKA +L L+M +  +  N I F+ +I       R+ E  K+
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503

Query: 434 IELLHKMKEINVMPDASIVSIVVD 457
            +L   M  I V PD    + ++D
Sbjct: 504 FDL---MVRIGVKPDIITYNTLID 524



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 163/369 (44%), Gaps = 43/369 (11%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG---VRPDAFTYN 208
           +A+ +F E++ +G   ++   N  + ++ ++      SR  + M + G   V P   TY 
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYA 96

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL------- 261
            L+   C  GR++       ++   G +    +++ L+ G C +K    A+ +       
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 262 ---------YSEML-----------------------SKGIKPDVVIHNTLFVGLFEIHQ 289
                    Y+ +L                         G  PDVV +NT+  G F+   
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            ++A+  + EM   G+  D  TY + I  LCK   + +A+E+ +T+       D   YNS
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++ G C SG+ + A+   + +    + PNVVTYS ++  LC +G+  +AR +F  M +  
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + P++ T+  L++G+       ++  LL  M    + PD  + +I++   AK E    ++
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396

Query: 470 PSFTVHEQQ 478
             F+   Q 
Sbjct: 397 LVFSKMRQH 405



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 6/212 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+     +   ++ S  +P+ +T+  +++GL    R   A  L+  +   G + ++ T
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+ + T  AL +F+ +   + +        T T+  +I  L K G +D+AK+
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKCGRMDEAKD 677

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L        + P+V TY+ +           E   LF+ M + G   +    N I+ +L 
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           + G +  A   L ++ +     +A T + LL+
Sbjct: 738 QRGDITRAGTYLFMIDEKHFSLEASTASFLLE 769


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 164/452 (36%), Positives = 249/452 (55%), Gaps = 6/452 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G  S  F V G+ILK  F P+A+TF +LIKGLC +  I +A     K+   G   D  +
Sbjct: 118 LGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVS 177

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+      AL L + +       G + +PN V Y  IID +CK   V+ A +
Sbjct: 178 YGTLINGLCKVGRITAALQLLKRVD------GKLVQPNAVMYNMIIDNMCKAKLVNDAFD 231

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  QM  K I P+  T  S+I GFC      EA  L  +M+ + + P + TF++++D  C
Sbjct: 232 LYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFC 291

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +L + ++  +  D  TYN+L+DG+CL   +N AK++F SM S G    V 
Sbjct: 292 KEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQ 351

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ +ING CK K ++ A++L+ EM  + I P+VV +N+L  GL ++ ++    KL DEM
Sbjct: 352 SYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEM 411

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   +  TY + +D LCKN ++ +A+ L   L+      D+  Y  LI GLC+SG+L
Sbjct: 412 HDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKL 471

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A ++F  L       +V TY++MI G C  G  D A  L   ME+N  +PN  T++++
Sbjct: 472 EDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIV 531

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           I      +E     +LL +M    ++ + S +
Sbjct: 532 ILSLFEKDENDMAEKLLREMIARGLLDEKSYI 563



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 211/443 (47%), Gaps = 41/443 (9%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP  + F  ++  L        A +L  ++ + G   D FT+  L+N   +     ++ +
Sbjct: 67  TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +F ++           +PN +T+ T+I GLC +G + +A     ++  +    + V+Y +
Sbjct: 127 VFGKILKKG------FDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C       A +L   +  + VQPN V +N+I+D +CK   +++A  L   M+   
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD FT N+L+ GFC+ G++  A  L   M        ++++SIL++ +CK    EG +
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCK----EGKV 296

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
                ML   +K D+++                               D  TY + +DG 
Sbjct: 297 KEAKMMLGVTMKKDIIL-------------------------------DVVTYNSLMDGY 325

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C    I +A ++F ++       ++++Y ++I+GLCK   ++ A+ LF  + C  ++PNV
Sbjct: 326 CLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNV 385

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTY+ +I GL   G++     L  +M +    PN+IT++ ++    + +   K I LL  
Sbjct: 386 VTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTN 445

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           +K+  + PD    ++++  L ++
Sbjct: 446 LKDQGIRPDMYTYTVLIKGLCQS 468



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 176/374 (47%), Gaps = 35/374 (9%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           +  KN  P ++ +  ++     AK  + A  L  +M   G+  +  TFN++++   + G 
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
              +  +   +++ G  P+A T+NTL+ G CL G ++ A      + + G      SY  
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LING CK   I  AL L   +  K ++P+ V++N +   + +   V  AF L+ +M    
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFH------------TLRILKCEF---------- 342
           ++ D +T  + I G C  G + EAV L H            T  IL   F          
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAK 300

Query: 343 -------------DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
                        D+  YNSL+DG C    +  A ++F S+    ++ NV +Y+ MI GL
Sbjct: 301 MMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGL 360

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C    +D+A +LF +M    ++PNV+T++ LI G  ++ + S V++L+ +M +    P+ 
Sbjct: 361 CKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNI 420

Query: 450 SIVSIVVDLLAKNE 463
              + ++D L KN 
Sbjct: 421 ITYNSILDALCKNH 434



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/205 (19%), Positives = 84/205 (40%), Gaps = 35/205 (17%)

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           S  S +  K   P ++  N +   L +      A  L  +M+ NG+ +D +T+   I+  
Sbjct: 56  SFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCF 115

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G    +  +F   +ILK  FD                                 PN 
Sbjct: 116 SQLGLNSLSFSVFG--KILKKGFD---------------------------------PNA 140

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +T++ +I GLC  G + +A +    +       + +++  LI G  ++   +  ++LL +
Sbjct: 141 ITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKR 200

Query: 440 MKEINVMPDASIVSIVVDLLAKNEI 464
           +    V P+A + ++++D + K ++
Sbjct: 201 VDGKLVQPNAVMYNMIIDNMCKAKL 225


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  295 bits (754), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 161/486 (33%), Positives = 260/486 (53%), Gaps = 31/486 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+       L ++      P+ VT++SL+  LC   R  EA  +F  +   G EPD+ TY
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 344

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGV-VC------------------- 95
            TL+ G   T   +V ++   ++   NG       F + +C                   
Sbjct: 345 RTLLQGYA-TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403

Query: 96  ----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                PN V Y T+ID LCK G VD A     QM D+ + PN++ YTS+I G C    W+
Sbjct: 404 QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWD 463

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A+ L +EM+D+G+  N + FN I+D  CK G++ E+ +L DLM++ GV+PD  TYNTL+
Sbjct: 464 KAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG CL G+++ A +L  SM S+G K  + +Y  LINGYC+   ++ AL+L+ EM+S G+ 
Sbjct: 524 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 583

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P+++ +N +  GLF   +   A +L+  + ++G   +  TY   + GLCKN    EA+ +
Sbjct: 584 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  L +   + + R +N +I  L K GR++ A +LF +     LVP+V TYS+M   L  
Sbjct: 644 FQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIE 703

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G +++  DLFL MEEN    +    + ++R  ++  + ++    L  + E +   +AS 
Sbjct: 704 QGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEAST 763

Query: 452 VSIVVD 457
            S +++
Sbjct: 764 ASFLLE 769



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 162/541 (29%), Positives = 270/541 (49%), Gaps = 72/541 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+TFT L+KGLCA+ R  +A  +   ++   GC PDVF+
Sbjct: 106 GRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFS 165

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNG------------------------------- 89
           Y  L+ GLC  + +  AL L   MA+  G                               
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYH 225

Query: 90  ---EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
              + G++  P+ VTY++II  LCK   +DKA E+L  M    + P+ +TY S++ G+C 
Sbjct: 226 EMLDRGIL--PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 283

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           +    EA     +M   GV+PNVVT++ +M+ LCKNG+  EA ++ D M + G+ PD  T
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 343

Query: 207 YNTLLDGFCLTG-----------------------------------RVNHAKELFVSME 231
           Y TLL G+   G                                   +V+ A  +F  M 
Sbjct: 344 YRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G    V  Y  +I+  CK+  ++ A+  + +M+ +G+ P+++++ +L  GL    + +
Sbjct: 404 QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWD 463

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           +A +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +  +  + DI  YN+LI
Sbjct: 464 KAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG C +G+++ A +L  S+    + P++VTY  +I G C   +MD A  LF +M  + V 
Sbjct: 524 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 583

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
           PN+IT++++++G       +   EL   + +     + S  +I++  L KN ++  +L  
Sbjct: 584 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643

Query: 472 F 472
           F
Sbjct: 644 F 644



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 261/556 (46%), Gaps = 77/556 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     +     +L     PD VT++S+I  LC    + +A  +   +   G  PD  TY
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C +     A+   ++M +     GV  EPN VTY+++++ LCK G   +A+++
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSD----GV--EPNVVTYSSLMNYLCKNGRSTEARKI 328

Query: 122 LLQMKDKNIKPNVVTYTSVIRGF---------------------------------CYAK 148
              M  + ++P++ TY ++++G+                                  YAK
Sbjct: 329 FDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAK 388

Query: 149 DW--NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
               ++A  +F +M   G+ PNVV +  ++D LCK+G +D+A    + MI  G+ P+   
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448

Query: 207 Y-----------------------------------NTLLDGFCLTGRVNHAKELFVSME 231
           Y                                   N+++D  C  GRV  +++LF  M 
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
            +G K  + +Y+ LI+G C   +++ A  L + M+S G+KPD+V + TL  G   + +++
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 568

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A  LF EM  +GV+ +  TY   + GL        A EL+ ++     + ++  YN ++
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 628

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GLCK+   + AL +F++L    L     T++IMIG L   G+MD+A+DLF     N +V
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV-SIVVDLLAKNEISLNSLP 470
           P+V T+ ++    I      ++ +L   M+E     D+ ++ SIV  LL + +I+     
Sbjct: 689 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 748

Query: 471 SFTVHEQQEEVDESNV 486
            F + E+   ++ S  
Sbjct: 749 LFMIDEKHFSLEASTA 764



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 221/444 (49%), Gaps = 14/444 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP   T+  LI   C   R+    A    +   G   D  T+T L+ GLC    T  A++
Sbjct: 89  TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMD 148

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---NIKPNVVT 136
           +         E G  C P+  +Y  ++ GLC E    +A ELL  M D       P+VV+
Sbjct: 149 IVLRRMT---ELG--CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 203

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y +V+ GF    D ++A   + EM+D+G+ P+VVT++ I+  LCK   MD+A  +L+ M+
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV 263

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           ++GV PD  TYN++L G+C +G+   A      M S G +  V +YS L+N  CKN    
Sbjct: 264 KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRST 323

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  ++  M  +G++PD+  + TL  G      +     L D M RNG+  D   +   I
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
               K   + +A+ +F  +R      ++  Y ++ID LCKSG ++ A+  F  +    L 
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKV 433
           PN++ Y+ +I GLC   + DKA +L L+M +  +  N I F+ +I       R+ E  K+
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503

Query: 434 IELLHKMKEINVMPDASIVSIVVD 457
            +L   M  I V PD    + ++D
Sbjct: 504 FDL---MVRIGVKPDIITYNTLID 524



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 163/369 (44%), Gaps = 43/369 (11%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG---VRPDAFTYN 208
           +A+ +F E++ +G   ++   N  + ++ ++      SR  + M + G   V P   TY 
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYA 96

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL------- 261
            L+   C  GR++       ++   G +    +++ L+ G C +K    A+ +       
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 262 ---------YSEML-----------------------SKGIKPDVVIHNTLFVGLFEIHQ 289
                    Y+ +L                         G  PDVV +NT+  G F+   
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            ++A+  + EM   G+  D  TY + I  LCK   + +A+E+ +T+       D   YNS
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++ G C SG+ + A+   + +    + PNVVTYS ++  LC +G+  +AR +F  M +  
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + P++ T+  L++G+       ++  LL  M    + PD  + +I++   AK E    ++
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396

Query: 470 PSFTVHEQQ 478
             F+   Q 
Sbjct: 397 LVFSKMRQH 405


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  294 bits (753), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 161/440 (36%), Positives = 246/440 (55%), Gaps = 20/440 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F V  +ILK               GLC   ++ EA      +   G   +  T
Sbjct: 115 LGQMTFAFSVFAKILKM--------------GLCLNGKVNEALLFHDHVLALGFHLNHVT 160

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+NGLC+   T  AL +  ++       G +   N V Y+TIIDGLCK+  V  A  
Sbjct: 161 YGILINGLCKMGQTRAALQVLRQIE------GKLVNTNVVMYSTIIDGLCKDKLVTDAYG 214

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P VVT++S+I GFC    + +A RLF EM+ + + P+  TFN+++D LC
Sbjct: 215 LYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALC 274

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  ++ +M++ GV P   TYNTL+DG+CL   V  AK +   +  M       
Sbjct: 275 KEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSR 334

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+ING+CK K ++ AL L+ EM  +GI P  V +N+L  GL +  ++  A++L DEM
Sbjct: 335 SYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM 394

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             N + AD  TY + ID  CKN ++ +A+ L   ++    + ++  YN LIDGLCK G+L
Sbjct: 395 HNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQL 454

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ++F+ L       N  TY+IMI GLC +G  D+A  L   ME+N ++P+ +T++ +
Sbjct: 455 KNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETI 514

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I+     +E  K  +LL +M
Sbjct: 515 IQALFHKDENEKAQKLLREM 534



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 246/483 (50%), Gaps = 23/483 (4%)

Query: 4   VSHGFVV------LGRILKSCFTPDAVTFTSLIKGLC-AESRIMEAAALFTKLRVFGCEP 56
           + +GFVV        R+ +   TP  V F  ++  L   ++      +L T++   G +P
Sbjct: 41  IPNGFVVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKP 100

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANG----NGE-----------FGVVCEPNTVT 101
           D+FT + L+N  C       A ++F ++       NG+             +    N VT
Sbjct: 101 DLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVT 160

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  +I+GLCK G    A ++L Q++ K +  NVV Y+++I G C  K   +A  L+ EM+
Sbjct: 161 YGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMI 220

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            + + P VVTF+ ++   C  GK  +A RL + M+   + PDA+T+N L+D  C  G++ 
Sbjct: 221 VKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIK 280

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            AK +   M   G + TV +Y+ L++GYC   E+  A  + S +    + P+   +N + 
Sbjct: 281 EAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMI 340

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G  +I  V+ A  LF EM   G+A    TY + IDGLCK G I  A EL   +      
Sbjct: 341 NGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIP 400

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            DI  YNSLID  CK+  ++ A+ L + +    + PN+ TY+I+I GLC  GQ+  A+D+
Sbjct: 401 ADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDV 460

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDLLA 460
           F D+       N  T++++I G  +     +   LL KM++  ++PDA +  +I+  L  
Sbjct: 461 FQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFH 520

Query: 461 KNE 463
           K+E
Sbjct: 521 KDE 523



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 166/322 (51%), Gaps = 6/322 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    F +   ++     PDA TF  L+  LC E +I EA  +   +   G EP V T
Sbjct: 241 VGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVT 300

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G C  +    A ++   ++       +   PN+ +Y  +I+G CK   VD+A  
Sbjct: 301 YNTLMDGYCLVNEVGKAKHVLSIISR------MRVAPNSRSYNIMINGFCKIKMVDEALC 354

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P+ VTY S+I G C A     A  L  EM +  +  ++VT+N ++D  C
Sbjct: 355 LFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFC 414

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN  +D+A  L+  + +HG++P+  TYN L+DG C  G++ +A+++F  +   G     +
Sbjct: 415 KNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAW 474

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+I+ING CK    + A  L S+M   GI PD V + T+   LF   + E+A KL  EM
Sbjct: 475 TYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534

Query: 301 QRNGVAADTWTYRTFIDGLCKN 322
              GV    +  R  + G   N
Sbjct: 535 VIKGVVVYAFEIRRTLVGRTLN 556



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 6/212 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P  VT+ SLI GLC   RI  A  L  ++       D+ TY +L++  C+  H   A+ 
Sbjct: 365 APHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIA 424

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +++     E G+  +PN  TY  +IDGLCK G +  A+++   +  K    N  TY  
Sbjct: 425 LVKKIK----EHGI--QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNI 478

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C    ++EA+ L  +M D G+ P+ VT+  I+  L    + ++A +LL  M+  G
Sbjct: 479 MINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKG 538

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           V   AF     L G  L   +N    LF ++E
Sbjct: 539 VVVYAFEIRRTLVGRTLNLGMNLISLLFSALE 570


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  294 bits (752), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 154/428 (35%), Positives = 243/428 (56%), Gaps = 6/428 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           +ILK+ + PD +T T+ IKG C + +I +A     K+   G   D  +Y TL+NGLC+  
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
            T  AL L           G + +P+ V Y TIIDG+CK+  V+ A +L  +   K I P
Sbjct: 313 ETKAALELLRRND------GKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFP 366

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +V TY ++I GFC      +A  LF +M  + + P+V TF++++D  CK+G + EA  +L
Sbjct: 367 DVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL 426

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
            +M++  ++PD  TY++L+DG+CL   VN A+ +F +M   G    V SY+I+ING+CK 
Sbjct: 427 AMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKI 486

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           K ++ A+ L+ EM  K I PDV+ +++L  GL +  ++  A +L DEM   G   D  TY
Sbjct: 487 KMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITY 546

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            + +D LCK  ++ +A+ L   L+      D+  Y  L+ GLC+SG+LE A ++F  L  
Sbjct: 547 NSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLV 606

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
                +V  Y++MI G C+ G  D+A  L   MEEN  +P+  T++++I      +E   
Sbjct: 607 KGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDM 666

Query: 433 VIELLHKM 440
             +LL +M
Sbjct: 667 AEKLLREM 674



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 137/412 (33%), Positives = 220/412 (53%), Gaps = 7/412 (1%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G EPD  T TT + G C       AL+  +++        +    + V+Y T+I+GLCK 
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKV------IAMGFHLDQVSYGTLINGLCKV 311

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G    A ELL +   K ++P+VV Y ++I G C  K  N+A  L+ E + + + P+V T+
Sbjct: 312 GETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTY 371

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++   C  GK+ +A  L + M    + PD +T++ L+DGFC  G +  AK +   M  
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
              K  V +YS L++GYC   E+  A S+++ M  +G+  +V  +N +  G  +I  V+ 
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDE 491

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A KLF EM    +  D  TY + IDGLCK+G I  A+EL   +     + DI  YNS++D
Sbjct: 492 AMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILD 551

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            LCK   ++ A+ L   L    + P++ TY+I++ GLC  G+++ AR +F D+       
Sbjct: 552 ALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNL 611

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV-DLLAKNE 463
           +V  + ++I+GF       + + LL KM+E   +PDA    I++  L  K+E
Sbjct: 612 DVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDE 663



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 164/305 (53%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  ++      PD  TF+ L+ G C +  I EA  +   +     +PDV T
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y++L++G C  +    A ++F  M++     GV    N  +Y  +I+G CK   VD+A +
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHR----GVT--ANVQSYNIMINGFCKIKMVDEAMK 494

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+V+TY+S+I G C +   + A  L  EM  +G QP+++T+N I+D LC
Sbjct: 495 LFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALC 554

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   +D+A  LL  +   G+RPD  TY  L+ G C +G++  A+++F  +   G    V+
Sbjct: 555 KKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVY 614

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I G+C     + AL+L S+M   G  PD   +  + + LFE  + + A KL  EM
Sbjct: 615 AYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674

Query: 301 QRNGV 305
              G+
Sbjct: 675 IMRGL 679



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 152/305 (49%)

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           +++  G +P+ +T    +   C  G++ +A    D +I  G   D  +Y TL++G C  G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
               A EL    +    +  V  Y+ +I+G CK+K +  A  LYSE +SK I PDV  +N
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L  G   + +++ A  LF++M    +  D +T+   +DG CK+G I EA  +   +   
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             + D+  Y+SL+DG C    +  A  +F ++    +  NV +Y+IMI G C    +D+A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             LF +M    + P+VIT+  LI G  +    S  +EL+ +M      PD    + ++D 
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 459 LAKNE 463
           L K  
Sbjct: 553 LCKKH 557



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 207/438 (47%), Gaps = 25/438 (5%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A +LF +L      P    +  ++  L ++ H    L+L ++M     EF  + + N +
Sbjct: 93  DAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKM-----EFKGI-KLNFL 146

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQ-------MKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
               +I+  C+ G +  A  +L +       +KD   + N+  +  +        D+   
Sbjct: 147 NCNILINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDF--- 203

Query: 154 KRLFIEMMDQGVQPNVV-TFNVIMDELCKNGKMDEASRLLDLMIQH--------GVRPDA 204
           KRLF++   Q    NV+ +F ++++      K     +  ++ I++        G  PD 
Sbjct: 204 KRLFLKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDT 263

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            T  T + GFCL G+++ A      + +MG      SY  LING CK  E + AL L   
Sbjct: 264 ITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRR 323

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
              K ++PDVV++NT+  G+ +   V  AF L+ E     +  D +TY   I G C  G 
Sbjct: 324 NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGK 383

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + +A++LF+ +       D+  ++ L+DG CK G ++ A  +   +    + P+VVTYS 
Sbjct: 384 LKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSS 443

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           ++ G C   +++KA  +F  M    V  NV +++++I GF +I    + ++L  +M    
Sbjct: 444 LMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ 503

Query: 445 VMPDASIVSIVVDLLAKN 462
           + PD    S ++D L K+
Sbjct: 504 IFPDVITYSSLIDGLCKS 521



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 67/325 (20%), Positives = 107/325 (32%), Gaps = 83/325 (25%)

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A  LF  +           +  ++    K+K     LSL  +M  KGIK + +  N L
Sbjct: 92  NDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNIL 151

Query: 281 FVGLFEIHQVERAFKL--------------FDEMQRNGVAADTWTYRTFIDG---LCKNG 323
                ++  +  AF +              FD           W      D      K+ 
Sbjct: 152 INSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDF 211

Query: 324 YIVEAVELFHTLRIL----------KC---------------------EFDIRAYNSLID 352
                  + H+ +IL          KC                     E D     + I 
Sbjct: 212 LQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIK 271

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC--------------NDGQM--- 395
           G C  G++  AL     +       + V+Y  +I GLC              NDG++   
Sbjct: 272 GFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQP 331

Query: 396 ------------------DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
                             + A DL+ +     + P+V T++ LI GF  + +    I+L 
Sbjct: 332 DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLF 391

Query: 438 HKMKEINVMPDASIVSIVVDLLAKN 462
           +KM   N++PD    SI+VD   K+
Sbjct: 392 NKMTSKNIIPDVYTFSILVDGFCKD 416


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  294 bits (752), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 160/464 (34%), Positives = 248/464 (53%), Gaps = 17/464 (3%)

Query: 6   HGFVVLGRILKS-------CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDV 58
           +G+   GRI  +        F PD  TF  LI+ LC   R+ +A A+F  +   GC P V
Sbjct: 138 NGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSV 197

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
            TY+ L++  C+ S    A+ L +EM A G       CEP+ VTY  +I+ +C EG VD+
Sbjct: 198 VTYSILLDATCKASGYRQAMVLLDEMRAKG-------CEPDIVTYNVLINAMCNEGDVDE 250

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A  +L  +     KP+ VTYT V++  C ++ W E + LF EM      P+ VTFN I+ 
Sbjct: 251 ALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVT 310

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LC+ G +D A +++D M +HG  PD  TY+++LDG C  GRV+ A EL   ++S GCK 
Sbjct: 311 SLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 370

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              +Y+ ++ G C  ++ E A  L +EM+     PD V  NT+   L +   V+RA K+ 
Sbjct: 371 DTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVV 430

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           ++M  NG   D  TY + IDGLC    I +A+EL   L+   C+ DI  +N+L+ GLC  
Sbjct: 431 EQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSV 490

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
            R E A +L  ++      P+  T++ +I  LC  G + +A +    M EN  +PN  T+
Sbjct: 491 DRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTY 550

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++++   ++  +  + ++LL  M   N  PD    + V+  + K
Sbjct: 551 NIVVDALLKAGKTQEALKLLSGM--TNGTPDLITYNTVISNITK 592



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 234/459 (50%), Gaps = 8/459 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L  +      PDAVT+T ++K LC   R  E   LF ++    C PD  T+
Sbjct: 246 GDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTF 305

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+V  LC+      A+ + + M+    E G  C P+ VTY++I+DGLC  G VD A EL
Sbjct: 306 NTIVTSLCQQGLVDRAIKVVDHMS----EHG--CIPDIVTYSSILDGLCDVGRVDDAVEL 359

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++K    KP+ + YT+V++G C  + W  A+ L  EM+     P+ VTFN ++  LC+
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A ++++ M ++G  PD  TYN+++DG C    ++ A EL  +++S GCK  + +
Sbjct: 420 KGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVT 479

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ L+ G C     E A  L   M+     PD    NT+   L +   + +A +    M 
Sbjct: 480 FNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMA 539

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   +  TY   +D L K G   EA++L   +       D+  YN++I  + K+G++E
Sbjct: 540 ENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKME 597

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL+L R +    L P+ +TY  +  G+C +   D+A  +   +++  + P+   ++ ++
Sbjct: 598 EALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDIL 657

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            GF +       I+    M     MPD S   I+++ LA
Sbjct: 658 LGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALA 696



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 235/484 (48%), Gaps = 43/484 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     V   +L    +P  VT++ L+   C  S   +A  L  ++R  GCEPD+ TY
Sbjct: 176 GRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTY 235

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N +C       ALN+  ++ +        C+P+ VTYT ++  LC      + +EL
Sbjct: 236 NVLINAMCNEGDVDEALNILSDLPSHG------CKPDAVTYTPVLKSLCGSERWKEVEEL 289

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M      P+ VT+ +++   C     + A ++   M + G  P++VT++ I+D LC 
Sbjct: 290 FAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCD 349

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM----------- 230
            G++D+A  LL  +  +G +PD   Y T+L G C   +  HA+EL   M           
Sbjct: 350 VGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVT 409

Query: 231 ---------------------ESM---GCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                                E M   GC   + +Y+ +I+G C  + I+ A+ L S + 
Sbjct: 410 FNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQ 469

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           S G KPD+V  NTL  GL  + + E A +L   M  +    D  T+ T I  LC+ G ++
Sbjct: 470 SYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLL 529

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A+E    +    C  +   YN ++D L K+G+ + AL+L   +  G   P+++TY+ +I
Sbjct: 530 QAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVI 587

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             +   G+M++A DL   M  N + P+ IT+  L  G  R +   + I +L +++++ + 
Sbjct: 588 SNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLS 647

Query: 447 PDAS 450
           PDA+
Sbjct: 648 PDAT 651



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 224/479 (46%), Gaps = 47/479 (9%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           C     V    LIK LC+  R+ +A  +F  L   G    V TY T+VNG CR      A
Sbjct: 93  CLPLPVVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDA 149

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
             L           G+   P+T T+  +I  LC  G V  A  +   M  +   P+VVTY
Sbjct: 150 RRLIS---------GMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTY 200

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           + ++   C A  + +A  L  EM  +G +P++VT+NV+++ +C  G +DEA  +L  +  
Sbjct: 201 SILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPS 260

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES------------------------- 232
           HG +PDA TY  +L   C + R    +ELF  M S                         
Sbjct: 261 HGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDR 320

Query: 233 ----------MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
                      GC   + +YS +++G C    ++ A+ L S + S G KPD + + T+  
Sbjct: 321 AIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLK 380

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
           GL  I Q E A +L  EM  +    D  T+ T I  LC+ G +  A+++   +    C  
Sbjct: 381 GLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNP 440

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           DI  YNS+IDGLC    ++ A+EL  +L      P++VT++ ++ GLC+  + + A  L 
Sbjct: 441 DIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLM 500

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++M  +   P+  TF+ +I    +     + IE L  M E   +P+ S  +IVVD L K
Sbjct: 501 VNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLK 559



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 214/404 (52%), Gaps = 8/404 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     V+  + +    PD VT++S++ GLC   R+ +A  L ++L+ +GC+PD   Y
Sbjct: 316 GLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAY 375

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TT++ GLC       A  L  EM   +      C P+ VT+ T+I  LC++G VD+A ++
Sbjct: 376 TTVLKGLCSIEQWEHAEELMAEMVCSD------CPPDEVTFNTVIASLCQKGLVDRAIKV 429

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + QM +    P++VTY S+I G C  +  ++A  L   +   G +P++VTFN ++  LC 
Sbjct: 430 VEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCS 489

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             + ++A +L+  M+     PDA T+NT++   C  G +  A E    M   GC     +
Sbjct: 490 VDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQST 549

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+++   K  + + AL L S M +    PD++ +NT+   + +  ++E A  L   M 
Sbjct: 550 YNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMV 607

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG++ DT TYR+   G+C+      A+ +   L+ +    D   YN ++ G C++ R +
Sbjct: 608 SNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTD 667

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           IA++ F  +     +P+  TY I++  L  +  +D+A+ L +++
Sbjct: 668 IAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 188/370 (50%), Gaps = 8/370 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +L R+      PD + +T+++KGLC+  +   A  L  ++    C PD  T
Sbjct: 350 VGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVT 409

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T++  LC+      A+ + E+M+  NG     C P+ VTY +IIDGLC E  +D A E
Sbjct: 410 FNTVIASLCQKGLVDRAIKVVEQMSE-NG-----CNPDIVTYNSIIDGLCNERCIDDAME 463

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  ++    KP++VT+ ++++G C    W +A++L + MM     P+  TFN ++  LC
Sbjct: 464 LLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLC 523

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G + +A   L +M ++G  P+  TYN ++D     G+   A +L   M +      + 
Sbjct: 524 QKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLI 581

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I+   K  ++E AL L   M+S G+ PD + + +L  G+      +RA ++   +
Sbjct: 582 TYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRL 641

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           Q  G++ D   Y   + G C+N     A++ F  +    C  D   Y  L++ L     L
Sbjct: 642 QDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLL 701

Query: 361 EIALELFRSL 370
           + A +L  +L
Sbjct: 702 DEAKQLLVNL 711



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 137/304 (45%), Gaps = 43/304 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     V+ ++ ++   PD VT+ S+I GLC E  I +A  L + L+ +GC+PD+ T+
Sbjct: 421 GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTF 480

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GLC       A  L   M + +      C P+  T+ T+I  LC++G + +A E 
Sbjct: 481 NTLLKGLCSVDRWEDAEQLMVNMMHSD------CPPDATTFNTVITSLCQKGLLLQAIET 534

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +    PN  TY  V+     A    EA +L   M +    P+++T+N ++  + K
Sbjct: 535 LKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITK 592

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTY---------------------------------- 207
            GKM+EA  LL +M+ +G+ PD  TY                                  
Sbjct: 593 AGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATF 652

Query: 208 -NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
            N +L GFC   R + A + F  M S GC     +Y IL+        ++ A  L   + 
Sbjct: 653 YNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLC 712

Query: 267 SKGI 270
           S G+
Sbjct: 713 SLGV 716


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  293 bits (751), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 162/464 (34%), Positives = 244/464 (52%), Gaps = 17/464 (3%)

Query: 6   HGFVVLGRILKS-------CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDV 58
           +G+   GRI  +        F PD  TF  LI+ LC   RI +A A+F  +   GC P V
Sbjct: 227 NGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSV 286

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
            TY+ L++  C+ S    A+ L +EM A G       CEP+ VTY  +I+ +C EG VD+
Sbjct: 287 VTYSILLDATCKESGYRQAMALLDEMRAKG-------CEPDIVTYNVLINAMCNEGDVDE 339

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A  +L  +     KP+ VTYT V++  C ++ W E + L  EM      P+ VTFN I+ 
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVT 399

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LC+ G +D A  ++D M +HG   D  TY+++LDG C  GRV+ A EL   ++S GCK 
Sbjct: 400 SLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 459

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              +Y+ ++ G C  ++ E A  L +EML     PD V  NT+   L +   V+RA ++ 
Sbjct: 460 DTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVV 519

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           ++M  NG + D  TY   IDGLC    I +A+EL   L+   C+ DI  +N+L+ GLC  
Sbjct: 520 EQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGV 579

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
            R E A +L  ++      P+ +T++ +I  LC  G + +A +    M EN  VPN  T+
Sbjct: 580 DRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTY 639

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +++   ++  +    +ELL  M   N  PD    + V+  L K
Sbjct: 640 SIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNLTK 681



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 231/459 (50%), Gaps = 8/459 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L  +      PDAVT+T ++K LC   R  E   L  ++    C PD  T+
Sbjct: 335 GDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTF 394

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+V  LC+      A+ + + M+    E G  C  + VTY++I+DGLC  G VD A EL
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMS----EHG--CVADIVTYSSILDGLCDVGRVDDAVEL 448

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++K    KP+ + YT+V++G C  + W  A+ L  EM+     P+ VTFN ++  LC+
Sbjct: 449 LSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A R+++ M ++G  PD  TYN ++DG C    ++ A EL   ++S GCK  + +
Sbjct: 509 KGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVT 568

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ L+ G C     E A  L + M+     PD +  NT+   L +   + +A +    M 
Sbjct: 569 FNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMA 628

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   ++ TY   +D L K G    A+EL   +       D+  YN++I  L K+G++E
Sbjct: 629 ENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNLTKAGKME 686

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL+L R +    L P+  TY  +  G+C +   D+A  +   +++  + P+   ++ ++
Sbjct: 687 EALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVL 746

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            GF R       I+    M     MPD S   I+++ LA
Sbjct: 747 LGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALA 785



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 236/490 (48%), Gaps = 43/490 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     V   +L    +P  VT++ L+   C ES   +A AL  ++R  GCEPD+ TY
Sbjct: 265 GRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTY 324

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N +C       ALN+   + +        C+P+ VTYT ++  LC      + +EL
Sbjct: 325 NVLINAMCNEGDVDEALNILSNLPSHG------CKPDAVTYTPVLKSLCGSERWKEVEEL 378

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M   N  P+ VT+ +++   C     + A  +   M + G   ++VT++ I+D LC 
Sbjct: 379 LAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCD 438

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM----------- 230
            G++D+A  LL  +  +G +PD   Y T+L G C T +   A+EL   M           
Sbjct: 439 VGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVT 498

Query: 231 ---------------------ESM---GCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                                E M   GC   + +Y+ +I+G C    I+ A+ L S++ 
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ 558

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           S G KPD+V  NTL  GL  + + E A +L   M R+    D  T+ T I  LC+ G + 
Sbjct: 559 SCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLT 618

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A+E    +    C  +   Y+ ++D L K+G+ + ALEL   +  G   P+++TY+ +I
Sbjct: 619 QAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVI 676

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L   G+M++A DL   M  N + P+  T+  L  G  R +   + + +L ++++  + 
Sbjct: 677 SNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLS 736

Query: 447 PDASIVSIVV 456
           PD +  + V+
Sbjct: 737 PDTTFYNDVL 746



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 223/476 (46%), Gaps = 47/476 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  V    LIK LC++ R+ +A  +F  L   G    V TY T+VNG CR      A  L
Sbjct: 185 PPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRL 241

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
                      G+   P+T T+  +I  LC  G +  A  +   M  +   P+VVTY+ +
Sbjct: 242 IN---------GMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSIL 292

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C    + +A  L  EM  +G +P++VT+NV+++ +C  G +DEA  +L  +  HG 
Sbjct: 293 LDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGC 352

Query: 201 RPDAFTY-----------------------------------NTLLDGFCLTGRVNHAKE 225
           +PDA TY                                   NT++   C  G V+ A E
Sbjct: 353 KPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIE 412

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +   M   GC   + +YS +++G C    ++ A+ L S + S G KPD + + T+  GL 
Sbjct: 413 VVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLC 472

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              Q ERA +L  EM  +    D  T+ T +  LC+ G +  A+ +   +    C  DI 
Sbjct: 473 STEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIV 532

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YN +IDGLC    ++ A+EL   L      P++VT++ ++ GLC   + + A  L  +M
Sbjct: 533 TYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANM 592

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +   P+ +TF+ +I    +    ++ IE L  M E   +P++S  SIVVD L K
Sbjct: 593 MRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLK 648



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 201/384 (52%), Gaps = 8/384 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT++S++ GLC   R+ +A  L ++L+ +GC+PD   YTT++ GLC T     A  L 
Sbjct: 425 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELM 484

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM   +      C P+ VT+ T++  LC++G VD+A  ++ QM +    P++VTY  +I
Sbjct: 485 AEMLCSD------CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCII 538

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C     ++A  L  ++   G +P++VTFN ++  LC   + ++A +L+  M++    
Sbjct: 539 DGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCP 598

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  T+NT++   C  G +  A E    M   GC     +YSI+++   K  + + AL L
Sbjct: 599 PDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALEL 658

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
            S M +    PD++ +NT+   L +  ++E A  L   M  NG+  DT TYR+   G+C+
Sbjct: 659 LSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCR 716

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
                 AV +   ++      D   YN ++ G C+  R ++A++ F  +     +P+  T
Sbjct: 717 EDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDEST 776

Query: 382 YSIMIGGLCNDGQMDKARDLFLDM 405
           Y I++  L   G +D+A+ L   +
Sbjct: 777 YVILLEALAYGGLLDEAKRLLASL 800



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 188/370 (50%), Gaps = 8/370 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +L R+      PD + +T+++KGLC+  +   A  L  ++    C PD  T
Sbjct: 439 VGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVT 498

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T+V  LC+      A+ + E+M+  NG     C P+ VTY  IIDGLC E  +D A E
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQMSE-NG-----CSPDIVTYNCIIDGLCNESCIDDAME 552

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  ++    KP++VT+ ++++G C    W +A++L   MM     P+ +TFN ++  LC
Sbjct: 553 LLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLC 612

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G + +A   L +M ++G  P++ TY+ ++D     G+   A EL   M +      + 
Sbjct: 613 QKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLI 670

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I+   K  ++E AL L   M+S G+ PD   + +L  G+      +RA ++   +
Sbjct: 671 TYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRV 730

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           Q  G++ DT  Y   + G C++     A++ F  +    C  D   Y  L++ L   G L
Sbjct: 731 QDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLL 790

Query: 361 EIALELFRSL 370
           + A  L  SL
Sbjct: 791 DEAKRLLASL 800



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 123/257 (47%), Gaps = 9/257 (3%)

Query: 15  LKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           L+SC   PD VTF +L+KGLC   R  +A  L   +    C PD  T+ T++  LC+   
Sbjct: 557 LQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGL 616

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A+   + MA  NG     C PN+ TY+ ++D L K G    A ELL  M   N  P+
Sbjct: 617 LTQAIETLKIMAE-NG-----CVPNSSTYSIVVDALLKAGKAQAALELLSGMT--NGTPD 668

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           ++TY +VI     A    EA  L   M+  G+ P+  T+  +   +C+    D A R+L 
Sbjct: 669 LITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLR 728

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            +   G+ PD   YN +L GFC   R + A + F  M S GC     +Y IL+       
Sbjct: 729 RVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGG 788

Query: 254 EIEGALSLYSEMLSKGI 270
            ++ A  L + + S G+
Sbjct: 789 LLDEAKRLLASLCSLGV 805



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 8/225 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++  +++S   PD +TF ++I  LC +  + +A      +   GC P+  TY+ +V+ L 
Sbjct: 588 LMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALL 647

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      AL L   M NG         P+ +TY T+I  L K G +++A +LL  M    
Sbjct: 648 KAGKAQAALELLSGMTNGT--------PDLITYNTVISNLTKAGKMEEALDLLRVMVSNG 699

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+  TY S+  G C     + A R+   + D G+ P+   +N ++   C++ + D A 
Sbjct: 700 LCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAI 759

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
                M+  G  PD  TY  LL+     G ++ AK L  S+ S+G
Sbjct: 760 DCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/461 (34%), Positives = 252/461 (54%), Gaps = 6/461 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
             +  F +L  ILKS + P+ VTF ++I G C    I +A      L   G   D FTY 
Sbjct: 105 HTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYG 164

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NGL +      AL+L +EM   +       +PN V Y+ +IDGLCK+GFV  A  L 
Sbjct: 165 TLINGLSKNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGLCKDGFVSDALGLC 218

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            Q+ ++ I  + VTY S+I G C    W E  +L  +M+ + V P+  TFN+++D LCK 
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++ EA  +L +M + G +PD  TYN L++G+C    V+ A+ELF  M   G +  V +Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++LI+GYCK K ++ A+ L+ E+ +K + P +  +N+L  GL    ++    KL DEM  
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +    D  TY   ID LCK G I+EA+ +   +     + +I  YN+++DG C    + +
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A ++F  +    L P+++ Y+++I G C    +D+A  LF +M    ++P++ +++ LI 
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           G   +     V ELL +M +    PD    +I++D   K +
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQ 559



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 150/440 (34%), Positives = 241/440 (54%), Gaps = 7/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      +L ++++    PD  TF  LI  LC E RI+EA  +   +   G +PD+ T
Sbjct: 243 VGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ G C   +   A  LF  M           EP+ + Y  +IDG CK   VD+A  
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRG------LEPDVLNYNVLIDGYCKTKMVDEAMV 356

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++ +KN+ P + +Y S+I G C +   +  K+L  EM      P+VVT+N+++D LC
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ EA  +L +M++ GV+P+  TYN ++DG+CL   VN AK++F  M   G +  + 
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDIL 476

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++LINGYCK + ++ A+ L+ EM  K + PD+  +N+L  GL  + ++    +L DEM
Sbjct: 477 NYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G + D  TY   +D  CK     +A+ LF  + +     D    ++++D LCK  +L
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKL 595

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           ++A +  + L      PNV TY+I+I  LC DG   +A  L   ME+N   P+ ITF+++
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I   ++ NE  K  +L  +M
Sbjct: 656 IGVLLQRNETDKAEKLREEM 675



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/497 (30%), Positives = 251/497 (50%), Gaps = 41/497 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  + KS   P+ V +++LI GLC +  + +A  L +++   G   D  TY
Sbjct: 174 GQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTY 233

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++G C          L  +M   N       +P+  T+  +ID LCKEG + +A+ +
Sbjct: 234 NSLIDGCCSVGRWQEVTQLLTKMVREN------VDPDDYTFNILIDALCKEGRILEAQGV 287

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  +  KP++VTY +++ G+C  ++ +EA+ LF  M+ +G++P+V+ +NV++D  CK
Sbjct: 288 LAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCK 347

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              +DEA  L   +    + P   +YN+L+DG C +GR++H K+L   M        V +
Sbjct: 348 TKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT 407

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+  CK   I  AL +   M+ KG+KP++V +N +  G    + V  A  +F+ M 
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++G+  D   Y   I+G CK   + EA+ LF  +R      DI +YNSLIDGLC  GR+ 
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIP 527

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF------------------- 402
              EL   +      P+V+TY+I++   C     DKA  LF                   
Sbjct: 528 HVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVD 587

Query: 403 -------LDMEENAV--------VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
                  L M E+A+         PNV T+ +LI    +     + + LL KM++ +  P
Sbjct: 588 NLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPP 647

Query: 448 DASIVSIVVD-LLAKNE 463
           DA    I++  LL +NE
Sbjct: 648 DAITFEIIIGVLLQRNE 664



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 239/459 (52%), Gaps = 6/459 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG       +  ++     +P   TFT LI     +S    A +L   +   G +P++ T
Sbjct: 68  MGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVT 127

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T++NG C       AL+  + +      F      +  TY T+I+GL K G +  A  
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLF------DQFTYGTLINGLSKNGQIKAALH 181

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M+  +++PN+V Y+++I G C     ++A  L  ++ ++G+  + VT+N ++D  C
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+  E ++LL  M++  V PD +T+N L+D  C  GR+  A+ +   M   G K  + 
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV 301

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+ GYC  + +  A  L++ M+ +G++PDV+ +N L  G  +   V+ A  LF E+
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +     +Y + IDGLC +G I    +L   +       D+  YN LID LCK GR+
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL +   +    + PN+VTY+ M+ G C    ++ A+D+F  M ++ + P+++ +++L
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVL 481

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           I G+ +     + I L  +M+  N++PD +  + ++D L
Sbjct: 482 INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGL 520



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 225/461 (48%), Gaps = 6/461 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V        R+++    P    F  L+  +        A +LFT+L+  G  P + T+T 
Sbjct: 36  VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+N     SHT  A +L   +           +PN VT+ TII+G C  G + KA +   
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSG------YQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            +  +    +  TY ++I G         A  L  EM    VQPN+V ++ ++D LCK+G
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            + +A  L   + + G+  DA TYN+L+DG C  GR     +L   M         ++++
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           ILI+  CK   I  A  + + M  +G KPD+V +N L  G      V  A +LF+ M + 
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  D   Y   IDG CK   + EA+ LF  L        I +YNSLIDGLC SGR+   
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            +L   +      P+VVTY+I+I  LC +G++ +A  + + M +  V PN++T++ ++ G
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           +   N  +   ++ ++M +  + PD    +++++   K E+
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 193/401 (48%), Gaps = 6/401 (1%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR  +   A+  F  M        V   P T  +  ++  + + G    A  L  Q++ K
Sbjct: 31  CRFRNVDDAVTCFNRMVR------VFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            I P++ T+T +I  + +      A  L   ++  G QPN+VTFN I++  C NG + +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
                 ++  G   D FTY TL++G    G++  A  L   ME    +  +  YS LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK+  +  AL L S++  +GI  D V +N+L  G   + + +   +L  +M R  V  D
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            +T+   ID LCK G I+EA  +   +     + DI  YN+L++G C    +  A ELF 
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L P+V+ Y+++I G C    +D+A  LF ++    +VP + +++ LI G     
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
             S V +LL +M      PD    +I++D L K    L +L
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 158/304 (51%), Gaps = 7/304 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+SH   +L  +  S   PD VT+  LI  LC E RI+EA  +   +   G +P++ TY
Sbjct: 384 GRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTY 443

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C  ++  VA ++F  M           EP+ + Y  +I+G CK   VD+A  L
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSG------LEPDILNYNVLINGYCKTEMVDEAIVL 497

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ KN+ P++ +Y S+I G C        + L  EM D G  P+V+T+N+++D  CK
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
               D+A  L   +++ G+ PD +T + ++D  C   ++  A++    +   GC   V +
Sbjct: 558 TQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQT 616

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILIN  CK+     A+ L S+M      PD +    +   L + ++ ++A KL +EM 
Sbjct: 617 YTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI 676

Query: 302 RNGV 305
             G+
Sbjct: 677 ARGL 680


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/457 (34%), Positives = 251/457 (54%), Gaps = 6/457 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F +L  ILKS + P+ VTF ++I G C    I +A      L   G   D FTY TL+N
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GL +      AL+L +EM   +       +PN V Y+ +IDGLCK+GFV  A  L  Q+ 
Sbjct: 169 GLSKNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++ I  + VTY S+I G C    W E  +L  +M+ + V P+  TFN+++D LCK G++ 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA  +L +M + G +PD  TYN L++G+C    V+ A+ELF  M   G +  V +Y++LI
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +GYCK K ++ A+ L+ E+ +K + P +  +N+L  GL    ++    KL DEM  +   
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D  TY   ID LCK G I+EA+ +   +     + +I  YN+++DG C    + +A ++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  +    L P+++ Y+++I G C    +D+A  LF +M    ++P++ +++ LI G   
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +     V ELL +M +    PD    +I++D   K +
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQ 559



 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 150/440 (34%), Positives = 241/440 (54%), Gaps = 7/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      +L ++++    PD  TF  LI  LC E RI+EA  +   +   G +PD+ T
Sbjct: 243 VGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ G C   +   A  LF  M           EP+ + Y  +IDG CK   VD+A  
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRG------LEPDVLNYNVLIDGYCKTKMVDEAMV 356

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++ +KN+ P + +Y S+I G C +   +  K+L  EM      P+VVT+N+++D LC
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ EA  +L +M++ GV+P+  TYN ++DG+CL   VN AK++F  M   G +  + 
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDIL 476

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++LINGYCK + ++ A+ L+ EM  K + PD+  +N+L  GL  + ++    +L DEM
Sbjct: 477 NYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G + D  TY   +D  CK     +A+ LF  + +     D    ++++D LCK  +L
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKL 595

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           ++A +  + L      PNV TY+I+I  LC DG   +A  L   ME+N   P+ ITF+++
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I   ++ NE  K  +L  +M
Sbjct: 656 IGVLLQRNETDKAEKLREEM 675



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 154/497 (30%), Positives = 251/497 (50%), Gaps = 41/497 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  + KS   P+ V +++LI GLC +  + +A  L +++   G   D  TY
Sbjct: 174 GQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTY 233

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++G C          L  +M   N       +P+  T+  +ID LCKEG + +A+ +
Sbjct: 234 NSLIDGCCSVGRWQEVTQLLTKMVREN------VDPDDYTFNILIDALCKEGRILEAQGV 287

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  +  KP++VTY +++ G+C  ++ +EA+ LF  M+ +G++P+V+ +NV++D  CK
Sbjct: 288 LAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCK 347

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              +DEA  L   +    + P   +YN+L+DG C +GR++H K+L   M        V +
Sbjct: 348 TKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT 407

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+  CK   I  AL +   M+ KG+KP++V +N +  G    + V  A  +F+ M 
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++G+  D   Y   I+G CK   + EA+ LF  +R      DI +YNSLIDGLC  GR+ 
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIP 527

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF------------------- 402
              EL   +      P+V+TY+I++   C     DKA  LF                   
Sbjct: 528 HVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVD 587

Query: 403 -------LDMEENAV--------VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
                  L M E+A+         PNV T+ +LI    +     + + LL KM++ +  P
Sbjct: 588 NLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPP 647

Query: 448 DASIVSIVVD-LLAKNE 463
           DA    I++  LL +NE
Sbjct: 648 DAITFEIIIGVLLQRNE 664



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 239/459 (52%), Gaps = 6/459 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG       +  ++     +P   TFT LI     +S    A +L   +   G +P++ T
Sbjct: 68  MGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVT 127

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T++NG C       AL+  + +      F      +  TY T+I+GL K G +  A  
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLF------DQFTYGTLINGLSKNGQIKAALH 181

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M+  +++PN+V Y+++I G C     ++A  L  ++ ++G+  + VT+N ++D  C
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+  E ++LL  M++  V PD +T+N L+D  C  GR+  A+ +   M   G K  + 
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV 301

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+ GYC  + +  A  L++ M+ +G++PDV+ +N L  G  +   V+ A  LF E+
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +     +Y + IDGLC +G I    +L   +       D+  YN LID LCK GR+
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL +   +    + PN+VTY+ M+ G C    ++ A+D+F  M ++ + P+++ +++L
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVL 481

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           I G+ +     + I L  +M+  N++PD +  + ++D L
Sbjct: 482 INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGL 520



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 225/461 (48%), Gaps = 6/461 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V        R+++    P    F  L+  +        A +LFT+L+  G  P + T+T 
Sbjct: 36  VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+N     SHT  A +L   +           +PN VT+ TII+G C  G + KA +   
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSG------YQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            +  +    +  TY ++I G         A  L  EM    VQPN+V ++ ++D LCK+G
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            + +A  L   + + G+  DA TYN+L+DG C  GR     +L   M         ++++
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           ILI+  CK   I  A  + + M  +G KPD+V +N L  G      V  A +LF+ M + 
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  D   Y   IDG CK   + EA+ LF  L        I +YNSLIDGLC SGR+   
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            +L   +      P+VVTY+I+I  LC +G++ +A  + + M +  V PN++T++ ++ G
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           +   N  +   ++ ++M +  + PD    +++++   K E+
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 190/393 (48%), Gaps = 6/393 (1%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR  +   A+  F  M        V   P T  +  ++  + + G    A  L  Q++ K
Sbjct: 31  CRFRNVDDAVTCFNRMVR------VFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            I P++ T+T +I  + +      A  L   ++  G QPN+VTFN I++  C NG + +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
                 ++  G   D FTY TL++G    G++  A  L   ME    +  +  YS LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK+  +  AL L S++  +GI  D V +N+L  G   + + +   +L  +M R  V  D
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            +T+   ID LCK G I+EA  +   +     + DI  YN+L++G C    +  A ELF 
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L P+V+ Y+++I G C    +D+A  LF ++    +VP + +++ LI G     
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             S V +LL +M      PD    +I++D L K
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 158/304 (51%), Gaps = 7/304 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+SH   +L  +  S   PD VT+  LI  LC E RI+EA  +   +   G +P++ TY
Sbjct: 384 GRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTY 443

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C  ++  VA ++F  M           EP+ + Y  +I+G CK   VD+A  L
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSG------LEPDILNYNVLINGYCKTEMVDEAIVL 497

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ KN+ P++ +Y S+I G C        + L  EM D G  P+V+T+N+++D  CK
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
               D+A  L   +++ G+ PD +T + ++D  C   ++  A++    +   GC   V +
Sbjct: 558 TQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQT 616

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILIN  CK+     A+ L S+M      PD +    +   L + ++ ++A KL +EM 
Sbjct: 617 YTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI 676

Query: 302 RNGV 305
             G+
Sbjct: 677 ARGL 680


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 166/504 (32%), Positives = 266/504 (52%), Gaps = 33/504 (6%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V  +++ +   P+  T+  LI G  +  +  E   +  K+   G +PD +TY +L+N LC
Sbjct: 229 VFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC 288

Query: 70  RTS--HTIVAL----------NLFEEMANGNGEFGVV--------------CEPNTVTYT 103
             S  H+ + L          ++F    +   + G++                PN V Y 
Sbjct: 289 ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 348

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
            +ID LCK G VD A+    QM ++ + PN+V + S++ G C    W  A+ L  EM+DQ
Sbjct: 349 ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ 408

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G+ PN V FN ++  LC  G++ E  RL+DLM   GVRPDAF+Y  L+ G+CL GR + A
Sbjct: 409 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEA 468

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           +++F  M S+G   T  +Y+ L++GYC    I+ A  L+ EML KG+ P VV +NT+  G
Sbjct: 469 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 528

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           LF+  +   A +L+  M  +G   D +TY   ++GLCK+  + EA ++F +L     + +
Sbjct: 529 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 588

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           I  +  +I  L K GR E A++LF ++P   LVPNVVTY ++   L  +G +++   LF 
Sbjct: 589 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 648

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            ME+N   PN    + L+R  +   + S+    L K+ E N   +AS  S+++ +   +E
Sbjct: 649 AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDE 708

Query: 464 IS--LNSLPSFTVHEQQEEVDESN 485
                 SLP     E+   ++E+N
Sbjct: 709 YQHHAKSLP-----EKYHFLNEAN 727



 Score =  264 bits (674), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 238/463 (51%), Gaps = 7/463 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVF 59
           MGR+ H F   G ILK+ +  + +    L+KGLC   R+ EA   L  ++   GC PD  
Sbjct: 111 MGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTV 170

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y+ L+ G C  +    AL L   MAN +G     C PN VTYTT+IDGLCK    D+A+
Sbjct: 171 SYSILLKGFCNENRAEEALELLRMMANDHGR---SCPPNVVTYTTVIDGLCKAQLFDRAE 227

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  QM D  +KPN  TY  +I G+     W E  ++  +M  +G++P+  T+  +++ L
Sbjct: 228 GVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYL 287

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C    + E    LDLM+++G+ PD   +N     +   G ++ A ++F  M   G    V
Sbjct: 288 C---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNV 344

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y  LI+  CK   ++ A   +++M+++G+ P++V+ N+L  GL  + + ERA +L  E
Sbjct: 345 VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYE 404

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G+  +   + T I  LC  G ++E   L   +  +    D  +Y  LI G C +GR
Sbjct: 405 MLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGR 464

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            + A ++F  +    L P  VTY+ ++ G C+  ++D A  LF +M    V P V+T++ 
Sbjct: 465 TDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNT 524

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++ G  +    S+  EL   M       D    +I+++ L K+
Sbjct: 525 ILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKS 567



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 154/328 (46%), Gaps = 15/328 (4%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA- 188
           + PN  TY+ +I   C       +   F  ++  G + N +  N ++  LC   ++ EA 
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM---ESMGCKHTVFSYSIL 245
             LL  M + G  PD  +Y+ LL GFC   R   A EL   M       C   V +Y+ +
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I+G CK +  + A  ++ +M+  G+KP+   +N L  G   I + +   ++ ++M   G+
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF----DIRAYNSLIDGLCKSGRLE 361
             D +TY + ++ LC       A+   H+   L  E     D   +N       K G ++
Sbjct: 274 KPDCYTYGSLLNYLC-------ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 326

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+++F  +    L PNVV Y  +I  LC  G++D A   F  M    V PN++ F+ L+
Sbjct: 327 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 386

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA 449
            G   +++  +  EL+++M +  + P+A
Sbjct: 387 YGLCTVDKWERAEELVYEMLDQGICPNA 414



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 6/260 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      V   ++    +P  VT+ +L+ G C+ SRI +A  LF ++   G  P V TY
Sbjct: 463 GRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTY 522

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++GL +T     A  L+  M N     G  C+    TY  I++GLCK   VD+A ++
Sbjct: 523 NTILHGLFQTKRFSEAKELYLNMINS----GTKCD--IYTYNIILNGLCKSNCVDEAFKM 576

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K ++ N++T+T +I          +A  LF  +   G+ PNVVT+ ++ + L +
Sbjct: 577 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIE 636

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++E   L   M ++G  P++   N L+      G ++ A      ++         +
Sbjct: 637 EGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 696

Query: 242 YSILINGYCKNKEIEGALSL 261
            S+LI+ +  ++    A SL
Sbjct: 697 TSLLISIFTSDEYQHHAKSL 716


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 159/464 (34%), Positives = 251/464 (54%), Gaps = 9/464 (1%)

Query: 3   RVSH---GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           R++H   GF VLG + K    P  VTFT+++ GLC E  + +A      L+  G E D +
Sbjct: 125 RLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRY 184

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           T   ++NGLC+  H+  AL+  ++M   N      C  +   Y  ++DGLCK+G V +A 
Sbjct: 185 TRGAIINGLCKVGHSSAALSYLKKMEEQN------CNLDVTAYNAVVDGLCKDGMVFEAW 238

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L  QM  K I+P++ TY  +I G C    W EA  L   MM +G+ P+V TFNVI    
Sbjct: 239 DLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRF 298

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K G +  A  +   M   G+  D  TY++++   C+  ++  A E+F  M   GC   +
Sbjct: 299 LKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNI 358

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+G+C+ K +  A+    EM++ G+ P++V  NTL  G  +  +   A +LF  
Sbjct: 359 VTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFV 418

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M ++G   D  T    +DGL K  +  EA+ LF  L  +  + DI  Y+ +++G+C SG+
Sbjct: 419 MHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGK 478

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  ALELF  L    +  +VVTY+IMI GLC +G +D A DL + MEEN   P+  T+++
Sbjct: 479 LNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNV 538

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            ++G +R  E SK  + L  MK      +A+   ++++  + N+
Sbjct: 539 FVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANK 582



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 182/412 (44%), Gaps = 36/412 (8%)

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
           ++ +  F      NT +    +D L     VD A +   +M      P V  +  +    
Sbjct: 30  SHSSSTFSTYASINT-SRAQFLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIV 88

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
              K +  A  L   M   GV+PNV T N++++ LC+         +L LM + GV P  
Sbjct: 89  AKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSI 148

Query: 205 FTYNTLLDGFCLTGR-------VNHAKEL----------------------------FVS 229
            T+ T+++G C+ G        V+H K++                               
Sbjct: 149 VTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKK 208

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           ME   C   V +Y+ +++G CK+  +  A  L+S+M  KGI+PD+  +N L  GL    +
Sbjct: 209 MEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDR 268

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            + A  L   M R G+  D  T+        K G I  A  +F  +  +  E D+  Y+S
Sbjct: 269 WKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSS 328

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +I   C   +++ A+E+F  +     +PN+VTY+ +I G C    M+KA     +M  N 
Sbjct: 329 IIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNG 388

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + PN++T++ LI GF +  +P    EL   M +   +PD    +I++D L K
Sbjct: 389 LDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFK 440



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 127/241 (52%), Gaps = 7/241 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I K C  P+ VT+TSLI G C    + +A     ++   G +P++ T+ TL+ G C+   
Sbjct: 350 IRKGCL-PNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGK 408

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
            + A  LF  M + +G+      P+  T   I+DGL K  F  +A  L  +++  N   +
Sbjct: 409 PVAAKELFFVM-HKHGQL-----PDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLD 462

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           ++ Y+ ++ G C +   N+A  LF  +  +GV+ +VVT+N++++ LCK G +D+A  LL 
Sbjct: 463 IIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLM 522

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M ++G  PD  TYN  + G      ++ + +  + M+  G +    +  +LIN +  NK
Sbjct: 523 KMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANK 582

Query: 254 E 254
           E
Sbjct: 583 E 583



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 34/164 (20%), Positives = 70/164 (42%)

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
           F+D L     +  A++ +H +  +K    ++ +N L   + K      A+ L + +    
Sbjct: 49  FLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIG 108

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + PNV T++I+I  LC          +   M +  V P+++TF  ++ G       ++ I
Sbjct: 109 VKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAI 168

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
             +  +K++    D      +++ L K   S  +L      E+Q
Sbjct: 169 RFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQ 212


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 151/370 (40%), Positives = 214/370 (57%), Gaps = 6/370 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+ + F VL ++LK    PD  TF +LI+GLC E +I EA  LF K    G +PDV TY 
Sbjct: 162 RLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYG 221

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NGLC+  +T  A+ L   M   N      C PN + Y TIID LCK+  V +A  L 
Sbjct: 222 TLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVIAYNTIIDSLCKDRQVTEAFNLF 275

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  K I P++ TY S+I   C   +W     L  EM++  + PNVV F+ ++D LCK 
Sbjct: 276 SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 335

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +  A  ++D+MI+ GV PD  TY  L+DG CL   ++ A ++F +M   GC   V SY
Sbjct: 336 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 395

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +ILINGYC+ + ++ A+ L  +M  +G+  D V +NTL  GL  + +++ A  LF EM  
Sbjct: 396 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 455

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G   D  TYR  +D LCKN ++ EA+ L   +     + DI  YN  IDG+C++G LE 
Sbjct: 456 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 515

Query: 363 ALELFRSLPC 372
           A +LF +L C
Sbjct: 516 ARDLFSNLSC 525



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 209/386 (54%), Gaps = 6/386 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T   LI   C   R+  A ++  KL   GC+PD  T+ TL+ GLC       AL+L
Sbjct: 145 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 204

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F++        G   +P+ VTY T+++GLCK G    A  LL  M  KN +PNV+ Y ++
Sbjct: 205 FDK------TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTI 258

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  +   EA  LF EM+ +G+ P++ T+N ++  LC   +    + LL+ M+   +
Sbjct: 259 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 318

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+   ++T++D  C  G +  A ++   M   G +  V +Y+ L++G+C   E++ A+ 
Sbjct: 319 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK 378

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++  M+ KG  P+V  +N L  G  +I ++++A  L ++M   G+ ADT TY T I GLC
Sbjct: 379 VFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 438

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G +  A+ LFH +       D+  Y  L+D LCK+  L  A+ L +++    L  +++
Sbjct: 439 HVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADIL 498

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDME 406
            Y+I I G+C  G+++ ARDLF ++ 
Sbjct: 499 VYNIAIDGMCRAGELEAARDLFSNLS 524



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 188/367 (51%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TV +T ++  + K         L  QM    I P+V T   +I  FC+ +    A  +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TFN ++  LC  GK+ EA  L D  I  G +PD  TY TL++G C 
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SM    C+  V +Y+ +I+  CK++++  A +L+SEM++KGI PD+  
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L   L  + + +    L +EM  + +  +   + T +D LCK G I  A ++   + 
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E D+  Y +L+DG C    ++ A+++F ++     VPNV +Y+I+I G C   +MD
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  L   M    ++ + +T++ LI G   +      I L H+M     +PD     I++
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 469

Query: 457 DLLAKNE 463
           D L KN 
Sbjct: 470 DYLCKNH 476



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 215/417 (51%), Gaps = 6/417 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A + F ++      P    +T L+  + +  H    L+L  +M      FG+   P+  
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM----DSFGI--PPDVY 148

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T   +I+  C    +  A  +L ++     +P+  T+ ++IRG C      EA  LF + 
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + +G QP+VVT+  +M+ LCK G    A RLL  M+Q   RP+   YNT++D  C   +V
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 268

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A  LF  M + G    +F+Y+ LI+  C   E +   +L +EM++  I P+VV+ +T+
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +   +  A  + D M + GV  D  TY   +DG C    + EAV++F T+    C
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             ++R+YN LI+G C+  R++ A+ L   +    L+ + VTY+ +I GLC+ G++  A  
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           LF +M  +  +P+++T+ +L+    + +  ++ + LL  ++  N+  D  + +I +D
Sbjct: 449 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 505



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 165/334 (49%), Gaps = 6/334 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +  + +   F PD VT+ +L+ GLC       A  L   +    C P+V  Y
Sbjct: 196 GKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAY 255

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++ LC+      A NLF EM       G+   P+  TY ++I  LC          L
Sbjct: 256 NTIIDSLCKDRQVTEAFNLFSEMITK----GI--SPDIFTYNSLIHALCNLCEWKHVTTL 309

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  I PNVV +++V+   C       A  +   M+ +GV+P+VVT+  +MD  C 
Sbjct: 310 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL 369

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +MDEA ++ D M+  G  P+  +YN L++G+C   R++ A  L   M   G      +
Sbjct: 370 RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 429

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G C    ++ A++L+ EM++ G  PD+V +  L   L + H +  A  L   ++
Sbjct: 430 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 489

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            + + AD   Y   IDG+C+ G +  A +LF  L
Sbjct: 490 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 148/310 (47%), Gaps = 6/310 (1%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ---HGVRPDAFTY 207
           ++A   F  M+     P+ V F  ++  +    KM   S +L L  Q    G+ PD +T 
Sbjct: 94  DDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L++ FC   R+ +A  +   +  +GC+    +++ LI G C   +I  AL L+ + + 
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G +PDVV + TL  GL ++     A +L   M +     +   Y T ID LCK+  + E
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  LF  +       DI  YNSLI  LC     +    L   +    ++PNVV +S ++ 
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC +G +  A D+   M +  V P+V+T+  L+ G    +E  + +++   M     +P
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 390

Query: 448 DASIVSIVVD 457
           +    +I+++
Sbjct: 391 NVRSYNILIN 400



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 128/273 (46%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + M+     P    +  LL         +    L   M+S G    V++ +I
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C  + +  A S+ +++L  G +PD    NTL  GL    ++  A  LFD+    G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D  TY T ++GLCK G    A+ L  ++    C  ++ AYN++ID LCK  ++  A 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ +I  LCN  +      L  +M  + ++PNV+ F  ++   
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +    +   +++  M +  V PD    + ++D
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMD 365


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 171/522 (32%), Positives = 268/522 (51%), Gaps = 48/522 (9%)

Query: 6   HGFVVLGR----------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG++ +G+          +      PD  T+ SL+  LC   R  EA   F  +   G +
Sbjct: 277 HGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIK 336

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNG----------------EFGVV----- 94
           P V TY  L++G   T   +  ++ F ++   NG                + G++     
Sbjct: 337 PKVSTYGILIHGYA-TKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 395

Query: 95  ---------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                      PN V Y  +ID LCK G VD A+    QM ++ + PN+V + S++ G C
Sbjct: 396 IFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC 455

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
               W  A+ L  EM+DQG+ PN V FN ++  LC  G++ E  RL+DLM   GVRPDAF
Sbjct: 456 TVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAF 515

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           +Y  L+ G+CLTGR + A+++F  M S+G   T  +Y+ L++GYC    I+ A  L+ EM
Sbjct: 516 SYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREM 575

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L KG+ P VV +NT+  GLF+  +   A +L+  M  +G   D +TY   ++GLCK+  +
Sbjct: 576 LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCV 635

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA ++F +L     + +I  +  +I  L K GR E A++LF ++P   LVPNVVTY ++
Sbjct: 636 DEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLV 695

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
              L  +G +++   LF  ME+N   PN    + L+R  +   + S+    L K+ E N 
Sbjct: 696 AENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 755

Query: 446 MPDASIVSIVVDLLAKNEIS--LNSLPSFTVHEQQEEVDESN 485
             +AS  S+++ +   +E      SLP     E+   ++E+N
Sbjct: 756 SVEASTTSLLMSIFTSDEYQHHAKSLP-----EKYHFLNEAN 792



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/439 (34%), Positives = 233/439 (53%), Gaps = 7/439 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVF 59
           MG + HGF   G ILK+ +  D +    L+KGLC   R+ EA   L  ++   GC PD  
Sbjct: 103 MGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTV 162

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +YT L+ GLC       AL L   MA+ +G     C PN V+Y+ +I+G   EG VDK  
Sbjct: 163 SYTILLKGLCNEKRAEEALELLHMMADDHGR---RCPPNVVSYSIVINGFFTEGQVDKPY 219

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L L+M D+ I P+VVTYT+VI G C A+ ++ A+ +F +M+D G +PN  T+N ++   
Sbjct: 220 NLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGY 279

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
              GK  E  ++L+ M   G++PD +TY +LL+  C  GR   A+  F SM   G K  V
Sbjct: 280 LSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKV 339

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y ILI+GY     +    S    M+  G+ PD  I N  F    +   +++A  +F++
Sbjct: 340 STYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNK 399

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+++G++ +   Y   ID LCK G + +A   F+ +       +I  +NSL+ GLC   +
Sbjct: 400 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 459

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E A EL   +    + PN V ++ +I  LCN G++ + R L   ME   V P+  ++  
Sbjct: 460 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 519

Query: 420 LIRGFI---RINEPSKVIE 435
           LI G+    R +E  KV +
Sbjct: 520 LISGYCLTGRTDEAEKVFD 538



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 208/427 (48%), Gaps = 33/427 (7%)

Query: 56  PDVFTYTTLVNGLCRTSH------------------TIVALN-LFEEMANGN--GEFGVV 94
           P++ TY+ L+   CR  H                    +A+N L + + +G   GE   V
Sbjct: 88  PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147

Query: 95  ---------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD---KNIKPNVVTYTSVIR 142
                    C P+TV+YT ++ GLC E   ++A ELL  M D   +   PNVV+Y+ VI 
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF      ++   LF+EM+D+G+ P+VVT+  ++D LCK    D A  +   MI +G +P
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP 267

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           + +TYN L+ G+   G+     ++   M + G K   ++Y  L+N  CKN     A   +
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFF 327

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
             M+ KGIKP V  +  L  G      +       D M  NG++ D   +  F     K 
Sbjct: 328 DSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKC 387

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G I +A+++F+ +R      ++  Y +LID LCK GR++ A   F  +    + PN+V +
Sbjct: 388 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 447

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++ GLC   + ++A +L  +M +  + PN + F+ LI     +    +   L+  M+ 
Sbjct: 448 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEH 507

Query: 443 INVMPDA 449
           + V PDA
Sbjct: 508 VGVRPDA 514



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 162/351 (46%), Gaps = 5/351 (1%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           V     ++ +  DK + PN+ TY+ +I  FC           F  ++  G + + +  N 
Sbjct: 72  VSHFNRMVRECSDK-VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQ 130

Query: 175 IMDELCKNGKMDEA-SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--- 230
           ++  LC   ++ EA   LL  M + G  PD  +Y  LL G C   R   A EL   M   
Sbjct: 131 LLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADD 190

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
               C   V SYSI+ING+    +++   +L+ EM+ +GI PDVV + T+  GL +    
Sbjct: 191 HGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLF 250

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           +RA  +F +M  NG   + +TY   I G    G   E V++   +     + D   Y SL
Sbjct: 251 DRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSL 310

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ++ LCK+GR   A   F S+    + P V TY I+I G    G + +       M EN +
Sbjct: 311 LNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGL 370

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            P+   F++    + +     K +++ +KM++  + P+      ++D L K
Sbjct: 371 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCK 421



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 12/289 (4%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH------- 237
           +D+A +L D ++ H        +N LL       R + A EL VS  +   +        
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVS-RARCSSASELAVSHFNRMVRECSDKVAP 88

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK-L 296
            + +YSILI  +C+   +E   + +  +L  G + D +  N L  GL    +V  A   L
Sbjct: 89  NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL---RILKCEFDIRAYNSLIDG 353
              M   G   DT +Y   + GLC      EA+EL H +      +C  ++ +Y+ +I+G
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
               G+++    LF  +    + P+VVTY+ +I GLC     D+A  +F  M +N   PN
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             T++ LI G++ I +  +V+++L +M    + PD      +++ L KN
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKN 317



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 6/260 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      V   ++    +P  VT+ +L+ G C+ SRI +A  LF ++   G  P V TY
Sbjct: 528 GRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTY 587

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++GL +T     A  L+  M N     G  C+    TY  I++GLCK   VD+A ++
Sbjct: 588 NTILHGLFQTKRFSEAKELYLNMINS----GTKCD--IYTYNIILNGLCKSNCVDEAFKM 641

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K ++ N++T+T +I          +A  LF  +   G+ PNVVT+ ++ + L +
Sbjct: 642 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIE 701

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++E   L   M ++G  P++   N L+      G ++ A      ++         +
Sbjct: 702 EGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 761

Query: 242 YSILINGYCKNKEIEGALSL 261
            S+L++ +  ++    A SL
Sbjct: 762 TSLLMSIFTSDEYQHHAKSL 781



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 10/220 (4%)

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH---QVERAFKLFDEMQR---NGVAAD 308
           ++ AL L+ E+L       V   N L   +         E A   F+ M R   + VA +
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE-LF 367
             TY   I   C+ G++      F  +       D  A N L+ GLC   R+  A++ L 
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN---AVVPNVITFDMLIRGF 424
           + +P    +P+ V+Y+I++ GLCN+ + ++A +L   M ++      PNV+++ ++I GF
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
               +  K   L  +M +  + PD    + V+D L K ++
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQL 249


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 168/441 (38%), Positives = 251/441 (56%), Gaps = 15/441 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F VL +ILK  + PD VT T+LIKGLC + ++ +A     KL   G   D  +
Sbjct: 111 LGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVS 170

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG+C+   T  A+ L   +       G + EPN V Y TIID LCK   V +A  
Sbjct: 171 YGTLINGVCKIGETRAAIQLLRRID------GRLTEPNVVMYNTIIDCLCKRKLVSEACN 224

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I  NVVTY+++I GFC      EA     EM+ + + P+V  +N ++D L 
Sbjct: 225 LFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALH 284

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +L ++++  ++P+  TYNTL+DG+        AK +F ++  MG    V+
Sbjct: 285 KEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDVW 336

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+IN  CK K +E AL+LY EM  K + P+ V +N+L  GL +  ++  A+ L DEM
Sbjct: 337 SYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEM 396

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG-LCKSGR 359
              G  A+  TY + I+GLCKNG + +A+ L + ++    + D+   N L+ G LCK  R
Sbjct: 397 HDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKR 456

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A  LF+ L      PNV TY+I+I G C +G +D+A  L   ME++   PN ITF +
Sbjct: 457 LKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKI 516

Query: 420 LIRGFIRINEPSKVIELLHKM 440
           +I   +   E  K  +LL +M
Sbjct: 517 IICALLEKGETDKAEKLLCEM 537



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 213/418 (50%), Gaps = 18/418 (4%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH--TIVALNLFEEMANGNGEFGVVCEPN 98
           +A   F ++      P +  +  +++   +  H  T+V+L+   E+           +P+
Sbjct: 46  DALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELK--------AIQPD 97

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
             T   +I+  C  G ++ A  +L ++     +P+ VT T++I+G C      +A     
Sbjct: 98  FFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHD 157

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           +++ QG + + V++  +++ +CK G+   A +LL  +      P+   YNT++D  C   
Sbjct: 158 KLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRK 217

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            V+ A  LF  M   G    V +YS +I+G+C   ++  AL   +EM+ K I PDV I+N
Sbjct: 218 LVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYN 277

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           TL   L +  +V+ A  +   + +  +  +  TY T IDG  K+        +F+ + ++
Sbjct: 278 TLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH--------VFNAVGLM 329

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
               D+ +YN +I+ LCK  R+E AL L++ +    +VPN VTY+ +I GLC  G++  A
Sbjct: 330 GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA 389

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            DL  +M +     NVIT++ LI G  +  +  K I L++KMK+  + PD   ++I++
Sbjct: 390 WDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILL 447



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 145/270 (53%), Gaps = 15/270 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     VL  I+K+C  P+ +T+ +LI G         A  +F  + + G  PDV++Y
Sbjct: 287 GKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDVWSY 338

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N LC+      ALNL++EM   N        PNTVTY ++IDGLCK G +  A +L
Sbjct: 339 NIMINRLCKIKRVEEALNLYKEMHQKN------MVPNTVTYNSLIDGLCKSGRISYAWDL 392

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL-C 180
           + +M D+    NV+TY S+I G C     ++A  L  +M DQG+QP++ T N+++  L C
Sbjct: 393 IDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLC 452

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++  A  L   ++  G  P+ +TYN ++ G C  G ++ A  L   ME  GC     
Sbjct: 453 KGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAI 512

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ I+I    +  E + A  L  EM+++G+
Sbjct: 513 TFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 162/313 (51%), Gaps = 25/313 (7%)

Query: 4   VSHGFVVLGRILKS----------CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 53
           + HGF ++G++ ++             PD   + +L+  L  E ++ EA  +   +    
Sbjct: 244 IIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTC 303

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
            +P+V TY TL++G  +             + N  G  GV   P+  +Y  +I+ LCK  
Sbjct: 304 LKPNVITYNTLIDGYAK------------HVFNAVGLMGVT--PDVWSYNIMINRLCKIK 349

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            V++A  L  +M  KN+ PN VTY S+I G C +   + A  L  EM D+G   NV+T+N
Sbjct: 350 RVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYN 409

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF-CLTGRVNHAKELFVSMES 232
            +++ LCKNG++D+A  L++ M   G++PD +T N LL G  C   R+ +A+ LF  +  
Sbjct: 410 SLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLD 469

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G    V++Y+I+I G+CK   ++ A +L S+M   G  P+ +    +   L E  + ++
Sbjct: 470 KGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDK 529

Query: 293 AFKLFDEMQRNGV 305
           A KL  EM   G+
Sbjct: 530 AEKLLCEMIARGL 542



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 165/331 (49%), Gaps = 8/331 (2%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P ++ +  ++  F   K +     L   +  + +QP+  T N++++  C  G+++ A  +
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  +++ G +PD  T  TL+ G CL G+V  A      + + G +    SY  LING CK
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
             E   A+ L   +  +  +P+VV++NT+   L +   V  A  LF EM   G++A+  T
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   I G C  G + EA+   + + +     D+  YN+L+D L K G+++ A  +   + 
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIV 300

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              L PNV+TY+ +I G         A+ +F  +    V P+V +++++I    +I    
Sbjct: 301 KTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVE 352

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + + L  +M + N++P+    + ++D L K+
Sbjct: 353 EALNLYKEMHQKNMVPNTVTYNSLIDGLCKS 383


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 160/487 (32%), Positives = 261/487 (53%), Gaps = 11/487 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR +    +   +++    P    +  L+ G   E  + E  +    +   G  PD   +
Sbjct: 286 GRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIF 345

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             + N   + +    A+++F++M            P  V Y  +ID LCK G VD A   
Sbjct: 346 NIMFNAYAKKAMIDEAMHIFDKMRQQ------WLSPGVVNYGALIDALCKLGRVDDAVLK 399

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM ++ + P++  ++S++ G C    W +A++LF E++DQG++ N   FN++M  LC+
Sbjct: 400 FNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCR 459

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA RL+DLM++  VRPD  +YNTL+DG CLTGR++ A +L   M S+G K   F+
Sbjct: 460 EGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFT 519

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++GYCK + I+ A SL+ EML KG+ P VV +NT+  GLF+I +   A +L+  M 
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMI 579

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            N    D +TY   ++GLC+N ++ EA ++F +L     + DI   N +I  L K GR E
Sbjct: 580 NNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKE 639

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++LF ++    LVP+V TY ++   L  +G +++  +LF  MEEN   PN    + L+
Sbjct: 640 DAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS--LNSLPS---FTVHE 476
           R  +   +  +    L K+ E N   +AS  S+++ + ++ E      SLP    F    
Sbjct: 700 RWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSLPEKYRFPQRS 759

Query: 477 QQEEVDE 483
            Q  VD+
Sbjct: 760 LQLSVDK 766



 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 252/500 (50%), Gaps = 42/500 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFT-PDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDV 58
           MGR+ HGF   G ILK+ ++  + V F  L+KGLC   R+ EA   L  ++  FGC  +V
Sbjct: 105 MGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNV 164

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
            +Y  L+ GLC       AL L   MA +G+G       PN VTYTT+IDGLCK   VD+
Sbjct: 165 ISYNILLKGLCNEKRAEEALELMHMMADDGDGSH----TPNVVTYTTVIDGLCKAQMVDR 220

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           AK +   M DK ++PN  TYT +I G+     W E  ++  EM   G+QP+ V + V++D
Sbjct: 221 AKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLD 280

Query: 178 ELCKNGKMDEASRL-----------------------------------LDLMIQHGVRP 202
            LCKNG+  EA  +                                   LDLM+++GV P
Sbjct: 281 YLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSP 340

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D   +N + + +     ++ A  +F  M        V +Y  LI+  CK   ++ A+  +
Sbjct: 341 DHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKF 400

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           ++M+++G+ PD+ + ++L  GL  + + E+A KLF E+   G+  +   +   +  LC+ 
Sbjct: 401 NQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCRE 460

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G ++EA  L   +  +    D+ +YN+L+DG C +GR++ A +L   +    L P+  TY
Sbjct: 461 GRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTY 520

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++ G C   ++D A  LF +M    + P V+T++ ++ G  +I    +  EL   M  
Sbjct: 521 NTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMIN 580

Query: 443 INVMPDASIVSIVVDLLAKN 462
                D    +I+++ L +N
Sbjct: 581 NRRKCDIYTYTIILNGLCRN 600



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 194/411 (47%), Gaps = 19/411 (4%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP-----NTVTYTTIIDGLC 110
           P   TYT L+   CR             + +G   FG++ +      NTV +  ++ GLC
Sbjct: 90  PSSCTYTILIGCFCRMG----------RLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLC 139

Query: 111 KEGFVDKAKELLL-QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---VQ 166
               VD+A ++LL +M +     NV++Y  +++G C  K   EA  L   M D G     
Sbjct: 140 DAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHT 199

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           PNVVT+  ++D LCK   +D A  +   MI  GVRP+  TY  L+ G+  TG+     ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              M + G +     Y++L++  CKN     A +++  ++ KGIKP V I+  L  G   
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT 319

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              +       D M RNGV+ D   +    +   K   I EA+ +F  +R       +  
Sbjct: 320 EGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y +LID LCK GR++ A+  F  +    + P++  +S ++ GLC   + +KA  LF ++ 
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +  +  N   F++L+    R     +   L+  M  ++V PD    + +VD
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVD 490



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 165/328 (50%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV    +   +++    TPD   F+SL+ GLC   +  +A  LF ++   G   +   
Sbjct: 390 LGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAF 449

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  L+  LCR    + A  L + M        V   P+ ++Y T++DG C  G +D+A +
Sbjct: 450 FNILMCNLCREGRVMEAQRLIDLM------LRVDVRPDVISYNTLVDGHCLTGRIDEAAK 503

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M    +KP+  TY +++ G+C A+  ++A  LF EM+ +G+ P VVT+N I+  L 
Sbjct: 504 LLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLF 563

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+  EA  L   MI +  + D +TY  +L+G C    V+ A ++F S+ S   +  +F
Sbjct: 564 QIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIF 623

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +I+I    K    E A+ L++ + + G+ PDV  +  +   L +   +E   +LF  M
Sbjct: 624 TINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAM 683

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           + NG A ++      +  L   G I  A
Sbjct: 684 EENGTAPNSRMLNALVRWLLHRGDIGRA 711



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 13/340 (3%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR-------PD 203
           ++A +LF EM+      +V TFN ++  + +  +   AS L+  +    +R       P 
Sbjct: 33  DDALKLFDEMLTYARPASVRTFNRLLTVVSR-ARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK-HTVFSYSILINGYCKNKEIEGALS-L 261
           + TY  L+  FC  GR+ H    F  +   G   +    +  L+ G C  K ++ A   L
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT---WTYRTFIDG 318
              M   G   +V+ +N L  GL    + E A +L   M  +G  + T    TY T IDG
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK   +  A  +F  +       +   Y  LI G   +G+ +  +++ + +    L P+
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y++++  LC +G+  +AR++F  +    + P+V  + +L+ G+      S++   L 
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLD 331

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
            M    V PD  I +I+ +  AK  +   ++  F    QQ
Sbjct: 332 LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQ 371



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 130/358 (36%), Gaps = 81/358 (22%)

Query: 185 MDEASRLLDLMIQHG-----------------------------------------VRPD 203
           +D+A +L D M+ +                                          V P 
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 204 AFTYNTLLDGFCLTGRVNH------------------------------AKE-------L 226
           + TY  L+  FC  GR+ H                              AK        L
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVVIHNTLFVG 283
              M   GC   V SY+IL+ G C  K  E AL L   M   G     P+VV + T+  G
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L +   V+RA  +F  M   GV  +  TY   I G    G   E V++   +     + D
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              Y  L+D LCK+GR   A  +F SL    + P+V  Y I++ G   +G + +      
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLD 331

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            M  N V P+   F+++   + +     + + +  KM++  + P       ++D L K
Sbjct: 332 LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCK 389


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  291 bits (744), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 170/505 (33%), Positives = 267/505 (52%), Gaps = 41/505 (8%)

Query: 6   HGFVVLG------RILKSC----FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG++ +G      R+LK        PD  T+  L+  LC + +  EA  LF  +   G +
Sbjct: 282 HGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIK 341

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGE------FGVV--------------- 94
           PDV  Y  +++G   T   +  ++ F ++  GNG       F +V               
Sbjct: 342 PDVSIYGIILHGYA-TKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMD 400

Query: 95  ---------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                      PN V Y T+ID LCK G VD A+    QM ++ + PN+V +TS++ G C
Sbjct: 401 IFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLC 460

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
               W +A  LF EM++QG+ PNVV FN IM  LC  G++ +A RL+DLM + G RPD  
Sbjct: 461 TIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDII 520

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           +YN L+ G CL G+ + A +L   M S+G K    +Y+ L++GYC++  I+ A S++ EM
Sbjct: 521 SYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEM 580

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           LS GI P VV +NT+  GLF+  +   A +L+  M  +G     +TY   ++GL KN  +
Sbjct: 581 LSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCV 640

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA+++F +L     + DI  +N +I  L K GR E A+ LF ++    LVP+V TY ++
Sbjct: 641 DEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLI 700

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
              L  +G +++   +F +ME++   PN +  + L+R  +   + S+    L K+ E N 
Sbjct: 701 AENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNF 760

Query: 446 MPDASIVSIVVDLLAKNEISLNSLP 470
             +AS  S+++ L ++ E    SLP
Sbjct: 761 SLEASTTSMLISLFSREEHQAKSLP 785



 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 161/450 (35%), Positives = 242/450 (53%), Gaps = 5/450 (1%)

Query: 1   MGRVSHGFVVLGRILKSCF-TPDAVTFTSLIKGLCAESRIMEA-AALFTKLRVFGCEPDV 58
           MGR+ HGF   G ILK+ +   D V    L+KGLC   R+ EA   L  ++   GC P+V
Sbjct: 107 MGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNV 166

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            +Y TL+ G C  +    AL L   MA+G       C PN V+Y T+I+G   EG VDKA
Sbjct: 167 VSYNTLLKGFCDENRAEEALELLHMMADGQVR---SCPPNLVSYNTVINGFFTEGQVDKA 223

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             L L M D+ I PNVVTYT VI G C A+  + A+ +F +M+D+GV+PN+VT+  ++  
Sbjct: 224 YNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHG 283

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
               G+  E  R+L  M  HG+ PD FTY  LLD  C  G+   A++LF SM   G K  
Sbjct: 284 YLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPD 343

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V  Y I+++GY     +    S    M+  GI P+  I N +F    +   +  A  +F+
Sbjct: 344 VSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFN 403

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M++ G++ +   Y T ID LCK G + +A   F+ +       +I  + SL+ GLC   
Sbjct: 404 KMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTID 463

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           + E A ELF  +    + PNVV ++ ++  LC +G++ KA+ L   ME     P++I+++
Sbjct: 464 KWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYN 523

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            LIRG   + +  +  +LL  M  + + P+
Sbjct: 524 ALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 234/458 (51%), Gaps = 7/458 (1%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           ++SC  P+ V++ ++I G   E ++ +A  LF  +   G  P+V TYT +++GLC+    
Sbjct: 197 VRSC-PPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A  +F++M +     GV   PN VTYT +I G    G   +   +L +M    ++P+ 
Sbjct: 256 DRAEGVFQQMIDK----GV--RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDC 309

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
            TY  ++   C      EA++LF  M+ +G++P+V  + +I+      G + E    LDL
Sbjct: 310 FTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDL 369

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+ +G+ P+ + +N +   F     +  A ++F  M   G    V +Y+ LI+  CK   
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           ++ A   +++M+++G+ P++V+  +L  GL  I + E+A +LF EM   G+  +   + T
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +  LC  G +++A  L   +  +    DI +YN+LI G C  G+ + A +L   +    
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG 549

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           L PN  TY+ ++ G C DG++D A  +F +M  N + P V+T++ ++ G  +    S+  
Sbjct: 550 LKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAK 609

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           EL   M            +I+++ L+KN     +L  F
Sbjct: 610 ELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMF 647



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 162/328 (49%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV    +   +++     P+ V FTSL+ GLC   +  +A  LF ++   G  P+V  
Sbjct: 427 LGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVF 486

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T++  LC     + A  L + M        V   P+ ++Y  +I G C  G  D+A +
Sbjct: 487 FNTIMCNLCTEGRVMKAQRLIDLMER------VGTRPDIISYNALIRGHCLVGKTDEASK 540

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M    +KPN  TY +++ G+C     ++A  +F EM+  G+ P VVT+N I+  L 
Sbjct: 541 LLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLF 600

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  +  EA  L   MI  G +   +TYN +L+G      V+ A ++F S+ S   +  + 
Sbjct: 601 KTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDII 660

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++I+I    K+   E A++L++ + + G+ PDV  +  +   L E   +E    +F EM
Sbjct: 661 TFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEM 720

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           +++G A ++      +  L   G I  A
Sbjct: 721 EKSGCAPNSLMLNFLVRRLLLRGDISRA 748



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 148/319 (46%), Gaps = 5/319 (1%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG-VRPDAFTYNTLLDGFCLTGRVNHA 223
           V P+V T+++++   C+ G+++       L+++ G    D    N LL G C   RV  A
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 224 KE-LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK---PDVVIHNT 279
              L   M  +GC   V SY+ L+ G+C     E AL L   M    ++   P++V +NT
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  G F   QV++A+ LF +M   G+  +  TY   IDGLCK   +  A  +F  +    
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              +I  Y  LI G    G+ +  + + + +    L P+  TY +++  LC  G+  +AR
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            LF  M    + P+V  + +++ G+      S++   L  M    + P+  I +IV    
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 460 AKNEISLNSLPSFTVHEQQ 478
           AK  +   ++  F    QQ
Sbjct: 390 AKKAMIGEAMDIFNKMRQQ 408



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 141/291 (48%), Gaps = 14/291 (4%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK--ELFVS----MESMGCKHT 238
           +D+A +L D  + H        +N LL       R   +   EL VS    M    C   
Sbjct: 31  VDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSKV 90

Query: 239 ---VFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIHNTLFVGLFEIHQVERAF 294
              VF+YSIL+  +C+   +E   + +  +L  G    DVV+ N L  GL +  +V  A 
Sbjct: 91  APDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAM 150

Query: 295 K-LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL---RILKCEFDIRAYNSL 350
             L   M   G   +  +Y T + G C      EA+EL H +   ++  C  ++ +YN++
Sbjct: 151 GVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTV 210

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I+G    G+++ A  LF  +    + PNVVTY+I+I GLC    +D+A  +F  M +  V
Sbjct: 211 INGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV 270

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            PN++T+  LI G++ I +  +V+ +L +M    + PD     +++D L K
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCK 321



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 6/271 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      +L  +L     P+  T+ +L+ G C + RI +A ++F ++   G  P V T
Sbjct: 532 VGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVT 591

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++GL +T     A  L+  M     ++ +       TY  I++GL K   VD+A +
Sbjct: 592 YNTILHGLFKTRRFSEAKELYLNMITSGKQWSI------YTYNIILNGLSKNNCVDEALK 645

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   +  K+++ +++T+  +I          +A  LF  +   G+ P+V T+ +I + L 
Sbjct: 646 MFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLI 705

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G ++E   +   M + G  P++   N L+    L G ++ A      ++         
Sbjct: 706 EEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEAS 765

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           + S+LI+ + + +    +L      L++  K
Sbjct: 766 TTSMLISLFSREEHQAKSLPEKYHFLNEAKK 796


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  291 bits (744), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 157/454 (34%), Positives = 251/454 (55%), Gaps = 13/454 (2%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           S    D V +T+L+ GL  E R+ +A A+  ++R  GCEP+V TY +L++GLC+ +    
Sbjct: 73  SGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDR 132

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN------- 129
           A  LFE M +      V C P+ VTY T++DGL + G +++A  L  +M D+        
Sbjct: 133 AQELFEHMKS------VECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PNV+TY+ +I G C A   ++A  L   M  +G  P+V+T+ +++D LCK  K+  A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +L  M+  G  P+  TYN+LL G C   RV+ A  L   M   GC   V +Y  LI+G 
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK   ++ A ++ ++M+ KG  PD++I+N L  GL +  QV+ +  L       G+  D 
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + I GLC++  + EA  L   ++   C  D+  Y++LIDGLCK+G+++ A +L+  
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +       +VVTYS +I GLC  G++D+A  L   M      P+ +T++ LI+G   +N 
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             + IEL+ +M+  N  P A   +I++  + + E
Sbjct: 487 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRME 520



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/441 (35%), Positives = 245/441 (55%), Gaps = 3/441 (0%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     +L  +      P+ VT+ SLI GLC  +    A  LF  ++   C P + TY 
Sbjct: 94  RLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYN 153

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNG-EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TL++GL RT     A+ LF+EM +    +    C PN +TY+ +IDGLCK   V +A EL
Sbjct: 154 TLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVEL 213

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  MK +   P+V+TYT ++ G C       A  +  EM+D G  PN+VT+N ++  LC+
Sbjct: 214 LESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCR 273

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ +A  L+  M   G  P+  TY TL+DG C  GRV  A  +   M   G    +  
Sbjct: 274 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 333

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++LING CK  +++ +++L    +S GIKPDVV ++++  GL   ++++ A +L   ++
Sbjct: 334 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 393

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D   Y T IDGLCK G + EA +L+  +    C+ D+  Y++LIDGLCK+GR++
Sbjct: 394 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVD 453

Query: 362 IA-LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A L L R +  G   P+ +TY+ +I GLC+   +D+A +L  +ME +   P+ +T+++L
Sbjct: 454 EAHLLLARMVRMGT-PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNIL 512

Query: 421 IRGFIRINEPSKVIELLHKMK 441
           I G  R+      + LL + K
Sbjct: 513 IHGMCRMERVDSAVVLLEQAK 533



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 144/429 (33%), Positives = 234/429 (54%), Gaps = 18/429 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+ +T++ LI GLC  +R+ +A  L   ++  GC PDV TYT LV+GLC+ S    A  
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  EM +        C PN VTY +++ GLC+   V  A  L+  M  +   PNVVTY +
Sbjct: 248 VLREMLDAG------CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 301

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C      +A  +  +M+D+G  P+++ +N++++ LCK  ++DE+  LL   +  G
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           ++PD  TY++++ G C + R++ A  L + ++S GC   V  YS LI+G CK  +++ A 
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 421

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            LY  M   G   DVV ++TL  GL +  +V+ A  L   M R G    T TY + I GL
Sbjct: 422 DLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 481

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-----RSLPCGV 374
           C   ++ EA+EL   +    C      YN LI G+C+  R++ A+ L      R +  G 
Sbjct: 482 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGG 541

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
              + + YS +I GLC  G++ +A D F +M +N V+P+ IT+ +L+ G  +  +     
Sbjct: 542 TALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKD----- 596

Query: 435 ELLHKMKEI 443
             LH+++ +
Sbjct: 597 --LHELRHL 603



 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 145/408 (35%), Positives = 226/408 (55%), Gaps = 13/408 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS    +L  +     +PD +T+T L+ GLC ES++  A  +  ++   GC P++ TY 
Sbjct: 206 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 265

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++GLCR      AL L  +M          C PN VTY T+IDGLCK G V  A  +L
Sbjct: 266 SLLHGLCRARRVSDALALMRDMTCRG------CTPNVVTYGTLIDGLCKVGRVKDACAML 319

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M DK   P+++ Y  +I G C A   +E+  L    +  G++P+VVT++ ++  LC++
Sbjct: 320 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 379

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DEA RLL  +   G  PD   Y+TL+DG C  G+V+ A +L+  M   GC   V +Y
Sbjct: 380 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTY 439

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI+G CK   ++ A  L + M+  G  P  + +N+L  GL +++ ++ A +L +EM+R
Sbjct: 440 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 499

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC------EFDIRAYNSLIDGLCK 356
           +  A    TY   I G+C+   +  AV L    +  +C        D  AY+SLIDGLCK
Sbjct: 500 SNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA-RCVAAGGTALDTIAYSSLIDGLCK 558

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           +GR+  AL+ F+ +    ++P+ +TYSI++ GL     + + R L LD
Sbjct: 559 AGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 606



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 144/444 (32%), Positives = 221/444 (49%), Gaps = 36/444 (8%)

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGV---------VCE-------- 96
           C+PDV+TY  L+ G CR      A   F+EM + N    V         +C+        
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 97  ------------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                        +TV YT ++ GL KE  +D+A  +L +M+D   +PNVVTY S+I G 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH------ 198
           C   + + A+ LF  M      P++VT+N ++D L + GK++ A  L   M+        
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 199 -GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
               P+  TY+ L+DG C   RV+ A EL  SM++ GC   V +Y+IL++G CK  ++  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  +  EML  G  P++V +N+L  GL    +V  A  L  +M   G   +  TY T ID
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLCK G + +A  +   +       D+  YN LI+GLCK+ +++ ++ L R    G + P
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +VVTYS +I GLC   ++D+A  L L ++     P+VI +  LI G  +  +  +  +L 
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424

Query: 438 HKMKEINVMPDASIVSIVVDLLAK 461
             M       D    S ++D L K
Sbjct: 425 EVMAGDGCDADVVTYSTLIDGLCK 448



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 202/370 (54%), Gaps = 7/370 (1%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           +C+P+  TY  ++ G C+ G +D+A+    +M+ KN+ PNV   + +I G C AK   +A
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            R F  M   G+  + V +  ++  L K  ++D+A  +L  M  HG  P+  TYN+L+DG
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK----- 268
            C     + A+ELF  M+S+ C  ++ +Y+ L++G  +  ++E A++L+ EML +     
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 269 --GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
                P+V+ ++ L  GL + ++V +A +L + M+  G + D  TY   +DGLCK   + 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            A E+   +    C  ++  YNSL+ GLC++ R+  AL L R + C    PNVVTY  +I
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC  G++  A  +  DM +    P+++ ++MLI G  + ++  + I LL +     + 
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 447 PDASIVSIVV 456
           PD    S V+
Sbjct: 364 PDVVTYSSVI 373



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 149/289 (51%), Gaps = 11/289 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +L  ++    TPD + +  LI GLC   ++ E+ AL  +    G +PDV T
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y++++ GLCR++    A  L   + +        C P+ + Y+T+IDGLCK G VD+A +
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRG------CPPDVILYSTLIDGLCKAGKVDEAFD 422

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M       +VVTY+++I G C A   +EA  L   M+  G  P+ +T+N ++  LC
Sbjct: 423 LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 482

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM-----GC 235
               +DEA  L++ M +    P A TYN L+ G C   RV+ A  L    ++      G 
Sbjct: 483 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGT 542

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
                +YS LI+G CK   +  AL  + EM+  G+ PD + ++ L  GL
Sbjct: 543 ALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGL 591



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 11/167 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV    ++L R+++    P  +T+ SLIKGLC  + + EA  L  ++    C P   TY
Sbjct: 450 GRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTY 509

Query: 62  TTLVNGLCRTSHTIVALNLFEE-----MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
             L++G+CR      A+ L E+     +A G          +T+ Y+++IDGLCK G V 
Sbjct: 510 NILIHGMCRMERVDSAVVLLEQAKARCVAAGGTAL------DTIAYSSLIDGLCKAGRVA 563

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           +A +   +M D  + P+ +TY+ ++ G   +KD +E + L ++ M Q
Sbjct: 564 EALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 610



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 62/123 (50%)

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C+ D+  Y +L+ G C+ G ++ A   F  +    LVPNV   SI+I GLC   +   A 
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             F  M+ + +V + + +  L+ G  +     + + +LH+M++    P+    + ++D L
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 460 AKN 462
            KN
Sbjct: 125 CKN 127



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+V TY+ ++ G C  G++D+A+  F +M    +VPNV    +LI G  +       +  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNV 486
              M+   ++ D  I + ++  L K +    +L    +HE ++   E NV
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALA--ILHEMRDHGCEPNV 114


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 164/449 (36%), Positives = 251/449 (55%), Gaps = 56/449 (12%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V   F     +++S   P   +F  L+ GL   +   +  +L+ K+R+ G  PD+FT   
Sbjct: 71  VIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNI 130

Query: 64  LVNGLC---RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           L N LC   R S  + A+                             G+ + G++     
Sbjct: 131 LANCLCNLNRVSEGLAAMT----------------------------GILRRGYI----- 157

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGF---CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
                      P++VTY ++I+G    C     +EAK +F EM  QG+ PNV++++ ++ 
Sbjct: 158 -----------PDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVH 206

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV---NHAKELFVSMESMG 234
             C  GK++E+ RL + M+  GV+P+   +N L+D  C  G++   + A++LF+SM S G
Sbjct: 207 GFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKG 266

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C+H   SY+ILINGYCK  ++E A++LY+EM   G +P+V  ++TL  GL +  +V  A 
Sbjct: 267 CEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDAN 326

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           KLF  M+ +G++ D+  Y  F+DGLCKNG + EA+ELF+ L+    + D  +Y+ LIDGL
Sbjct: 327 KLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGL 386

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF---LDMEENAVV 411
           CK+G++EIA E F+ L    L PNVVT +IMI G C   Q+DKA  LF     MEEN   
Sbjct: 387 CKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCT 446

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKM 440
           P++IT++ L+RGF   N+  +V+ LLHKM
Sbjct: 447 PDIITYNTLLRGFCESNKLEEVVNLLHKM 475



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 186/344 (54%), Gaps = 15/344 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIK---GLCAESRIMEAAALFTKLRVFGCEPD 57
           + RVS G   +  IL+  + PD VT+ +LIK   GLC      EA  +F +++  G  P+
Sbjct: 138 LNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPN 197

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV-- 115
           V +Y++LV+G C       +  LF EM +     GV  +PN V +  +ID LCKEG +  
Sbjct: 198 VISYSSLVHGFCCAGKLEESKRLFNEMVDQ----GV--QPNLVQFNVLIDILCKEGKIGD 251

Query: 116 -DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
              A++L L M  K  + N ++YT +I G+C      EA  L+ EM   G +PNV T++ 
Sbjct: 252 LSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYST 311

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  L + GK+ +A++L  +M   G+  D+  Y   LDG C  G +  A ELF  ++S  
Sbjct: 312 LLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYN 371

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            K    SYS LI+G CK  ++E A   + ++  +G++P+VV  N +  G   + QV++A 
Sbjct: 372 FKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKAN 431

Query: 295 KLFDEMQR---NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            LF++M++   NG   D  TY T + G C++  + E V L H +
Sbjct: 432 ILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 182/361 (50%), Gaps = 9/361 (2%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P   ++  ++ GL K     +   L  +M+   + P++ T   +    C     +E    
Sbjct: 88  PPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAA 147

Query: 157 FIEMMDQGVQPNVVTFNVIMDEL---CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
              ++ +G  P++VT+N ++  L   CK G  DEA  + + M   G+ P+  +Y++L+ G
Sbjct: 148 MTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 207

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI---EGALSLYSEMLSKGI 270
           FC  G++  +K LF  M   G +  +  +++LI+  CK  +I     A  L+  M SKG 
Sbjct: 208 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGC 267

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           + + + +  L  G  +I +VE A  L++EM + G   +  TY T + GL + G + +A +
Sbjct: 268 EHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANK 327

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           LF  ++      D   Y   +DGLCK+G L  A+ELF  L       +  +YS +I GLC
Sbjct: 328 LFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLC 387

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK---VIELLHKMKEINVMP 447
             G+++ A + F  + +  + PNV+T +++I GF R+ +  K   + E + KM+E    P
Sbjct: 388 KAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTP 447

Query: 448 D 448
           D
Sbjct: 448 D 448



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 155/305 (50%), Gaps = 14/305 (4%)

Query: 180 CKNGKMD--EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV---SMESMG 234
           CK G +D  +A    DLM++    P   ++N LL G     ++NH  +LF     M   G
Sbjct: 64  CKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGL---AKINHYSQLFSLYNKMRLAG 120

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV---E 291
               +F+ +IL N  C    +   L+  + +L +G  PD+V +NTL  GL+ + +V   +
Sbjct: 121 LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHED 180

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A ++F+EM+  G+  +  +Y + + G C  G + E+  LF+ +     + ++  +N LI
Sbjct: 181 EAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLI 240

Query: 352 DGLCKSGR---LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           D LCK G+   L  A +LF S+P      N ++Y+I+I G C   ++++A +L+ +M + 
Sbjct: 241 DILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQV 300

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
              PNV T+  L+ G ++  +     +L   MK   +  D+ I  I +D L KN +   +
Sbjct: 301 GKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEA 360

Query: 469 LPSFT 473
           +  F 
Sbjct: 361 MELFN 365



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 22/279 (7%)

Query: 6   HGFVVLGRILKS----------CFTPDAVTFTSLIKGLCAESRIME---AAALFTKLRVF 52
           HGF   G++ +S             P+ V F  LI  LC E +I +   A  LF  +   
Sbjct: 206 HGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSK 265

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           GCE +  +YT L+NG C+      A+NL+ EM        V   PN  TY+T++ GL + 
Sbjct: 266 GCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ------VGKRPNVKTYSTLLTGLLQT 319

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G V  A +L   MK   I  +   Y   + G C      EA  LF E+     + +  ++
Sbjct: 320 GKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESY 379

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           + ++D LCK GK++ A      + Q G++P+  T N ++ GFC   +V+ A  LF  ME 
Sbjct: 380 SRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEK 439

Query: 233 M---GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           M   GC   + +Y+ L+ G+C++ ++E  ++L  +M  +
Sbjct: 440 MEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 478



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 166/361 (45%), Gaps = 45/361 (12%)

Query: 110 CKEGFVDKAKELL---LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           CK G +D  +      L M+   I P + ++  ++ G      +++   L+ +M   G+ 
Sbjct: 64  CKTGNIDVIQAFHFFDLMMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLS 122

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL---LDGFCLTGRVNHA 223
           P++ T N++ + LC   ++ E    +  +++ G  PD  TYNTL   L G C  G  + A
Sbjct: 123 PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEA 182

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           KE+F                                    EM ++G+ P+V+ +++L  G
Sbjct: 183 KEIF-----------------------------------EEMKAQGMIPNVISYSSLVHG 207

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE---AVELFHTLRILKC 340
                ++E + +LF+EM   GV  +   +   ID LCK G I +   A +LF ++    C
Sbjct: 208 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGC 267

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           E +  +Y  LI+G CK  ++E A+ L+  +P     PNV TYS ++ GL   G++  A  
Sbjct: 268 EHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANK 327

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           LF  M+ + +  +   + + + G  +     + +EL +++K  N   D    S ++D L 
Sbjct: 328 LFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLC 387

Query: 461 K 461
           K
Sbjct: 388 K 388


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 164/487 (33%), Positives = 265/487 (54%), Gaps = 18/487 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L  +  + F PDA T T +I  + A +  ++ A     LR  GC+P+V TY
Sbjct: 126 GDLHAALELLEEMKSAGFAPDAFTHTPIITAM-ANAGDLDGA--MDHLRSMGCDPNVVTY 182

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+    R      A+ L EEM     E G  C PN VTY  ++D LCK   V  A+++
Sbjct: 183 TALIAAFARAKKLEEAMKLLEEMR----ERG--CPPNLVTYNVLVDALCKLSMVGAAQDV 236

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M +    PNV+T+ S++ GFC   + ++A++L   M+ +G++PNVVT++ ++D LCK
Sbjct: 237 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 296

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + K  EA  +L+ M   GV PDAFTY+ L+ G C   ++  A+++   M   GC   V  
Sbjct: 297 SQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 356

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+ +CK+ ++  A     EM  +   PDVV +NT+  GL ++ ++  A  + ++MQ
Sbjct: 357 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQ 416

Query: 302 RNG-VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +G V  D  TY T I+GLCK+  +VEA +L   +    C  D+  Y ++IDGLCK GRL
Sbjct: 417 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRL 476

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A  L + +      PNVVTY+ +I GLC   ++D+A  +  +M      PN++T++ +
Sbjct: 477 EEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTM 536

Query: 421 IRGFIRINEPSKVIELLHKMKE--INVMPDASIVSIVV------DLLAKNEISLNSLPSF 472
           + G        +  +L+ +MK+      PDA+    +V      DL+ + E  L  + S 
Sbjct: 537 VNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKST 596

Query: 473 TVHEQQE 479
           T  +Q++
Sbjct: 597 TSSQQEQ 603



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 163/326 (50%), Gaps = 3/326 (0%)

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           ++ S+++     K   EA  LF   +    +P+V ++N+++   C  G +  A  LL+ M
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G  PDAFT+  ++      G ++ A +    + SMGC   V +Y+ LI  + + K++
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAAFARAKKL 195

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E A+ L  EM  +G  P++V +N L   L ++  V  A  +  +M   G A +  T+ + 
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           +DG CK G + +A +L   +       ++  Y++LIDGLCKS +   A E+   +    +
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+  TYS +I GLC   ++++A  +   M  +   P+V+ +  +I  F +  +  +  +
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 375

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAK 461
            L +M++    PD    + V+D L K
Sbjct: 376 TLQEMRKQRKSPDVVTYNTVIDGLCK 401



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 3/299 (1%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G      ++N ++  L +  K  EA  L    +     PD  +YN ++ GFC  G ++ A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            EL   M+S G     F+++ +I       +++GA+     + S G  P+VV +  L   
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAA 188

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                ++E A KL +EM+  G   +  TY   +D LCK   +  A ++   +       +
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  +NSL+DG CK G ++ A +L   +    + PNVVTYS +I GLC   +  +A+++  
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +M+   V P+  T+  LI G  + ++  +  ++L +M      PD  + S ++    K+
Sbjct: 309 EMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKS 367


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 154/466 (33%), Positives = 252/466 (54%), Gaps = 15/466 (3%)

Query: 4   VSHGFVVLGR------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD 57
           ++  F   GR      I ++  +PDA+ + ++I G C ++    A     ++      PD
Sbjct: 201 LTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPD 260

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           VFTY  L++GLC+ S T  A  +  EM +     GV   P+TVT+ +I+DGLCK G  ++
Sbjct: 261 VFTYNILIDGLCKASKTDKASEMLHEMVDR----GVT--PDTVTFNSIMDGLCKAGKFER 314

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A  LL  M ++N +P+  TY ++I G C  ++ + AK L  E +  G  P+VVT++++ D
Sbjct: 315 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILAD 374

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LCK G++DEA  L+  M   G  P+  TYNTL+DG C   +   A EL  S+ S G   
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVP 434

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            V +Y+I+++G CK   ++ AL +   ML +G  P V+ +  L  GL    +V+ A  +F
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            EM      AD   Y + ++G CK+    EA ++   +R       I  YN+L+DG CK 
Sbjct: 495 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYCKE 551

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GRL+    +F  + C   VPN+ TY+I++ GLC  G++D+A      M     VP+V+++
Sbjct: 552 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 611

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +++I G  + ++P +  ++L +M +  + PDA   + ++    K E
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 657



 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 152/481 (31%), Positives = 245/481 (50%), Gaps = 42/481 (8%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L + + PD+ T+  +IK LC  ++I +A  +  K +V G +P+V  YT L    C+T 
Sbjct: 150 RMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTG 209

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               AL +F  + +          P+ + Y  II G C++   D A E L +M ++ + P
Sbjct: 210 RLKDALEIFRNIPS----------PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAP 259

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +V TY  +I G C A   ++A  +  EM+D+GV P+ VTFN IMD LCK GK + A  LL
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 319

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
            +M +   RP   TYNTL+ G C    V+ AK+L     S G    V +YSIL +G CK 
Sbjct: 320 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKR 379

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             I+ A  L  EM  KG  P++V +NTL  GL +  + E+A++L + +  +G   D  TY
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTY 439

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR---- 368
              +DGLCK G + +A+++   +    C   +  Y +L++GLC++GR++ A  +F+    
Sbjct: 440 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 499

Query: 369 -----------SLPCGVL-----------------VPNVVTYSIMIGGLCNDGQMDKARD 400
                      SL  G                    P +  Y+ ++ G C +G++D+  +
Sbjct: 500 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPN 559

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           +F DM     VPN+ T+++++ G  +  +  +    L  M     +PD    +I++D L 
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619

Query: 461 K 461
           K
Sbjct: 620 K 620



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 150/459 (32%), Positives = 233/459 (50%), Gaps = 42/459 (9%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           + S F PD VT++ L  GLC   RI EA  L  ++   GC P++ TY TL++GLC+ S T
Sbjct: 358 VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKT 417

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A  L E + +     G V  P+ VTYT I+DGLCKEG +DKA +++  M  +   P+V
Sbjct: 418 EKAYELLESLVSS----GFV--PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSV 471

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQ------------------------------G 164
           +TYT+++ G C     +EA  +F EM+ +                              G
Sbjct: 472 ITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG 531

Query: 165 VQ--PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
           ++  P +  +N +MD  CK G++DE   + + M   G  P+  TYN ++DG C  G+V+ 
Sbjct: 532 IRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDE 591

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
           A     SM S GC   V SY+I+I+G  K  + + A  +  +M+  GI PD V +NTL  
Sbjct: 592 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 651

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
              +  + + A  +   M + GV  D  TY T I GL +   + +A EL H +    C  
Sbjct: 652 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV 711

Query: 343 DI-RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
                YN++ID LCK G L+ AL L   +    +  N VTY+I I  LC +G++D+A  L
Sbjct: 712 SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 771

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
             +M+    + + +++  +I G  +  +  +  +L  +M
Sbjct: 772 LSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREM 807



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 241/494 (48%), Gaps = 43/494 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+   F ++  +     TP+ VT+ +LI GLC  S+  +A  L   L   G  PDV TY
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTY 439

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +V+GLC+      AL + E M          C P+ +TYT +++GLC+ G VD+A  +
Sbjct: 440 TIIVDGLCKEGRLDKALKMVEGMLKRG------CTPSVITYTALMEGLCRTGRVDEAHHI 493

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL------------------------- 156
             +M  K+   + + Y S++ G+C +    EA+++                         
Sbjct: 494 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGR 553

Query: 157 -------FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
                  F +M  +G  PN+ T+N++MD LCK+GK+DEA   L+ M   G  PD  +YN 
Sbjct: 554 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 613

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           ++DG     +   A+++   M   G      +Y+ L+  +CK +  + A+ +   M+  G
Sbjct: 614 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG-VAADTWTYRTFIDGLCKNGYIVEA 328
           + PD V +NTL  GL + +++  A++L  EM RNG V +   TY T ID LCK G + +A
Sbjct: 674 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQA 733

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + L   +     E +   YN  ID LCK GRL+ A  L   +     + + V+Y+ +I G
Sbjct: 734 LLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIG 790

Query: 389 LCNDGQMDKARDLFLDM-EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           LC   Q+D+A  L  +M     +     TF++LI  F +     + + LL  M +    P
Sbjct: 791 LCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSP 850

Query: 448 DASIVSIVVDLLAK 461
                ++V+  L K
Sbjct: 851 SVITYNMVITCLCK 864



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 219/464 (47%), Gaps = 60/464 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     ++  +LK   TP  +T+T+L++GLC   R+ EA  +F ++    C  D   Y
Sbjct: 450 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 509

Query: 62  TTLVNGLCRTSHTIVA------------LNLFEEMANGNGEFGVV--------------C 95
            +LVNG C++S T  A            ++++  + +G  + G +              C
Sbjct: 510 VSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGC 569

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
            PN  TY  ++DGLCK G VD+A   L  M      P+VV+Y  +I G   A    EA++
Sbjct: 570 VPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQ 629

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +  +M+  G+ P+ VT+N +M + CK  + D+A  +L  MI+ GV PD  TYNTL+ G  
Sbjct: 630 VLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLS 689

Query: 216 LTGRVNHAKELFVSMESMGCK-HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
            T R+  A EL   M   GC      +Y+ +I+  CK   ++ AL L   M   G++ + 
Sbjct: 690 QTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANT 749

Query: 275 VIHN--------------------------------TLFVGLFEIHQVERAFKLFDEM-Q 301
           V +N                                T+ +GL +  Q++RA KL  EM  
Sbjct: 750 VTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVA 809

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+   + T+   ID   K   + EA+ L   +    C   +  YN +I  LCK  +++
Sbjct: 810 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVD 869

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            A ELF  +    +V + V+Y+++I GLC  G+  +A  +  +M
Sbjct: 870 KAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 180/390 (46%), Gaps = 32/390 (8%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           +T T    +  L + G  D+   +  +M D    P+  TY  VI+  C     ++A  + 
Sbjct: 124 STFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTML 183

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKM-------------------------------D 186
            +   +G +P V  + ++    CK G++                               D
Sbjct: 184 DKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCD 243

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A   L  M +  V PD FTYN L+DG C   + + A E+   M   G      +++ ++
Sbjct: 244 GALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIM 303

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G CK  + E A SL + M  +  +P    +NTL  GL +   V+RA  L DE   +G  
Sbjct: 304 DGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFV 363

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D  TY    DGLCK G I EA EL   +    C  ++  YN+LIDGLCK+ + E A EL
Sbjct: 364 PDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYEL 423

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
             SL     VP+VVTY+I++ GLC +G++DKA  +   M +    P+VIT+  L+ G  R
Sbjct: 424 LESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 483

Query: 427 INEPSKVIELLHKMKEINVMPDA-SIVSIV 455
                +   +  +M   +   DA + VS+V
Sbjct: 484 TGRVDEAHHIFKEMVSKDCTADALAYVSLV 513



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 178/378 (47%), Gaps = 45/378 (11%)

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           +E L Q +   ++P VV+     R     KD   A   F+   D+G + +  T N  +  
Sbjct: 81  RERLEQWRG-TLQPAVVS-----RVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQT 134

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYN----------------TLLD---------- 212
           L +NG  D    + + M+  G  PD++TY+                T+LD          
Sbjct: 135 LLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPE 194

Query: 213 ---------GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
                     FC TGR+  A E+F ++ S        +Y+ +I+G+C+  + +GAL    
Sbjct: 195 VSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLK 250

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM  + + PDV  +N L  GL +  + ++A ++  EM   GV  DT T+ + +DGLCK G
Sbjct: 251 EMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAG 310

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
               A  L   +    C      YN+LI GLCK   ++ A +L         VP+VVTYS
Sbjct: 311 KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYS 370

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           I+  GLC  G++D+A +L  +M      PN++T++ LI G  + ++  K  ELL  +   
Sbjct: 371 ILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS 430

Query: 444 NVMPDASIVSIVVDLLAK 461
             +PD    +I+VD L K
Sbjct: 431 GFVPDVVTYTIIVDGLCK 448


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 159/466 (34%), Positives = 257/466 (55%), Gaps = 12/466 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L  +  + F PDA T T +I  + A +  ++ A     LR  GC+P+V TY
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAM-ANAGDLDGA--MDHLRSMGCDPNVVTY 60

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+    R      A+ L EEM     E G  C PN VTY  ++D LCK   V  A+++
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMR----ERG--CPPNLVTYNVLVDALCKLSMVGAAQDV 114

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M +    PNV+T+ S++ GFC   + ++A++L   M+ +G++PNVVT++ ++D LCK
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + K  EA  +L+ M   GV PDAFTY+ L+ G C   ++  A+++   M   GC   V  
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+ +CK+ ++  A     EM  +   PDVV +NT+  GL ++ ++  A  + D+MQ
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294

Query: 302 RNG-VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +G V  D  TY T I+GLCK+  +VEA +L   +    C  D+  Y ++IDGLCK GRL
Sbjct: 295 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRL 354

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A  L + +      PNVVTY+ +I GLC   ++D+A  +  +M      PN++T++ +
Sbjct: 355 EEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTM 414

Query: 421 IRGFIRINEPSKVIELLHKMKE--INVMPDASIVSIVVDLLAKNEI 464
           + G        +  +L+ +MK+      PDA+    +V+ L  +++
Sbjct: 415 VNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDL 460



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 189/337 (56%), Gaps = 9/337 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +LG ++     P+ VT+++LI GLC   + +EA  +  +++  G  PD FTY
Sbjct: 141 GNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTY 200

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GLC+      A  +   MA G+G     C P+ V Y++II   CK G + +A++ 
Sbjct: 201 SALIHGLCKADKIEEAEQMLRRMA-GSG-----CTPDVVVYSSIIHAFCKSGKLLEAQKT 254

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELC 180
           L +M+ +   P+VVTY +VI G C      EA+ +  +M + G V P+VVT++ +++ LC
Sbjct: 255 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLC 314

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+  + EA +LLD M + G  PD  TY T++DG C  GR+  A+ L   M+  GC   V 
Sbjct: 315 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 374

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G CK ++++ A  +  EM + G  P++V +NT+  GL    +++ A +L   M
Sbjct: 375 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 434

Query: 301 Q--RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           +  R   + D  TYRT ++ L  +  + EA +L   +
Sbjct: 435 KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 141/282 (50%), Gaps = 3/282 (1%)

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C  G +  A  LL+ M   G  PDAFT+  ++      G ++ A +    + SMGC   V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNV 57

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI  + + K++E A+ L  EM  +G  P++V +N L   L ++  V  A  +  +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G A +  T+ + +DG CK G + +A +L   +       ++  Y++LIDGLCKS +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
              A E+   +    + P+  TYS +I GLC   ++++A  +   M  +   P+V+ +  
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +I  F +  +  +  + L +M++    PD    + V+D L K
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 279


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 149/444 (33%), Positives = 247/444 (55%), Gaps = 11/444 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA T+T +I+GLC   R+ EA +L   +   GC+P V TYT L+  +C+++    A+ +
Sbjct: 174 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 233

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            +EM A G       C PN VTY  II+G+C+EG VD A+E L ++     +P+ V+YT+
Sbjct: 234 LDEMRAKG-------CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 286

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C AK W + + LF EMM++   PN VTF++++   C+ G ++ A ++L+ M  HG
Sbjct: 287 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 346

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
              +    N +++  C  GRV+ A +   +M S GC     SY+ ++ G C+ +  E A 
Sbjct: 347 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 406

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  EM+ K   P+ V  NT    L +   +E+A  L ++M  +G   +  TY   ++G 
Sbjct: 407 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 466

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C  G +  A+ELF++   + C+ +   Y +L+ GLC + RL+ A EL   +      PNV
Sbjct: 467 CVQGRVDSALELFYS---MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 523

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT+++++   C  G MD+A +L   M E+   PN+IT++ L+ G  +     + +ELLH 
Sbjct: 524 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHG 583

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           +    V PD    S ++ +L++ +
Sbjct: 584 LVSNGVSPDIVTYSSIIGVLSRED 607



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 154/477 (32%), Positives = 230/477 (48%), Gaps = 47/477 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD    T LI+ LC   R  +AA +       G   DVF Y TLV G CR      A  L
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 166

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M            P+  TYT II GLC  G V +A  LL  M  +  +P+VVTYT +
Sbjct: 167 IASMPVA---------PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVL 217

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C +  + +A  +  EM  +G  PN+VT+NVI++ +C+ G++D+A   L+ +  +G 
Sbjct: 218 LEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGF 277

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSM------------------------------ 230
           +PD  +Y T+L G C   R    +ELF  M                              
Sbjct: 278 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQ 337

Query: 231 --ESM---GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
             E M   GC       +I+IN  CK   ++ A    + M S G  PD + + T+  GL 
Sbjct: 338 VLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLC 397

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              + E A +L  EM R     +  T+ TFI  LC+ G I +A  L   +    CE +I 
Sbjct: 398 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIV 457

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YN+L++G C  GR++ ALELF S+PC    PN +TY+ ++ GLCN  ++D A +L  +M
Sbjct: 458 TYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEM 514

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +    PNV+TF++L+  F +     + IEL+ +M E    P+    + ++D + K+
Sbjct: 515 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD 571



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/423 (34%), Positives = 225/423 (53%), Gaps = 9/423 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV      L R+    F PD V++T+++KGLCA  R  +   LF ++    C P+  T+
Sbjct: 260 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 319

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV   CR      A+ + E+M+ G+G     C  NT     +I+ +CK+G VD A + 
Sbjct: 320 DMLVRFFCRGGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGRVDDAFQF 373

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      P+ ++YT+V++G C A+ W +AK L  EM+ +   PN VTFN  +  LC+
Sbjct: 374 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 433

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +++A+ L++ M +HG   +  TYN L++GFC+ GRV+ A ELF SM    CK    +
Sbjct: 434 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTIT 490

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+ G C  + ++ A  L +EML K   P+VV  N L     +   ++ A +L ++M 
Sbjct: 491 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 550

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   +  TY T +DG+ K+    EA+EL H L       DI  Y+S+I  L +  R+E
Sbjct: 551 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 610

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+++F  +    + P  V Y+ ++  LC     D A D F  M  N  +PN +T+  LI
Sbjct: 611 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 670

Query: 422 RGF 424
            G 
Sbjct: 671 EGL 673



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 227/460 (49%), Gaps = 9/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +L     P  VT+T L++ +C  +   +A  +  ++R  GC P++ TY
Sbjct: 190 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 249

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NG+CR      A     E  N    +G   +P+TV+YTT++ GLC     +  +EL
Sbjct: 250 NVIINGMCREGRVDDA----REFLNRLSSYGF--QPDTVSYTTVLKGLCAAKRWEDVEEL 303

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +KN  PN VT+  ++R FC       A ++  +M   G   N    N++++ +CK
Sbjct: 304 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 363

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D+A + L+ M  +G  PD  +Y T+L G C   R   AKEL   M    C     +
Sbjct: 364 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 423

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++  I   C+   IE A  L  +M   G + ++V +N L  G     +V+ A +LF  M 
Sbjct: 424 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 483

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
                 +T TY T + GLC    +  A EL   +    C  ++  +N L+   C+ G ++
Sbjct: 484 ---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 540

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+EL   +      PN++TY+ ++ G+  D   ++A +L   +  N V P+++T+  +I
Sbjct: 541 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 600

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               R +   + I++ H ++++ + P A I + ++  L K
Sbjct: 601 GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 640



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 171/334 (51%), Gaps = 9/334 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F  L  +     +PD +++T+++KGLC   R  +A  L  ++    C P+  T+
Sbjct: 365 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 424

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T +  LC+      A  L E+M+    E G  CE N VTY  +++G C +G VD A EL
Sbjct: 425 NTFICILCQKGLIEQATMLIEQMS----EHG--CEVNIVTYNALVNGFCVQGRVDSALEL 478

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M     KPN +TYT+++ G C A+  + A  L  EM+ +   PNVVTFNV++   C+
Sbjct: 479 FYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 535

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G MDEA  L++ M++HG  P+  TYNTLLDG         A EL   + S G    + +
Sbjct: 536 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVT 595

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I    +   +E A+ ++  +   G++P  VI+N + + L +    + A   F  M 
Sbjct: 596 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV 655

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            NG   +  TY T I+GL    ++ E  +L   L
Sbjct: 656 SNGCMPNELTYITLIEGLANEDFLKETRDLLREL 689



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 154/292 (52%), Gaps = 10/292 (3%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           + K+C  P+ VTF + I  LC +  I +A  L  ++   GCE ++ TY  LVNG C    
Sbjct: 413 VRKNC-PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 471

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL LF  M          C+PNT+TYTT++ GLC    +D A ELL +M  K+  PN
Sbjct: 472 VDSALELFYSMP---------CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 522

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+  ++  FC     +EA  L  +MM+ G  PN++T+N ++D + K+   +EA  LL 
Sbjct: 523 VVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLH 582

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            ++ +GV PD  TY++++       RV  A ++F  ++ +G +     Y+ ++   CK  
Sbjct: 583 GLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRC 642

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
             +GA+  ++ M+S G  P+ + + TL  GL     ++    L  E+   GV
Sbjct: 643 NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 155/332 (46%), Gaps = 3/332 (0%)

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  L+ +   +   P+V   T +IR  C     ++A R+       G   +V  +N ++
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              C+ G++D A RL+  M    V PDA+TY  ++ G C  GRV  A  L   M   GC+
Sbjct: 152 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
            +V +Y++L+   CK+     A+ +  EM +KG  P++V +N +  G+    +V+ A + 
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            + +   G   DT +Y T + GLC      +  ELF  +    C  +   ++ L+   C+
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G +E A+++   +       N    +I+I  +C  G++D A     +M      P+ I+
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  +++G  R        ELL +M   N  P+
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 420


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 149/445 (33%), Positives = 247/445 (55%), Gaps = 11/445 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PDA T+T +I+GLC   R+ EA +L   +   GC+P V TYT L+  +C+++    A+ 
Sbjct: 142 APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME 201

Query: 80  LFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           + +EM A G       C PN VTY  II+G+C+EG VD A+E L ++     +P+ V+YT
Sbjct: 202 VLDEMRAKG-------CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 254

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +V++G C AK W + + LF EMM++   PN VTF++++   C+ G ++ A ++L+ M  H
Sbjct: 255 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 314

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G   +    N +++  C  GRV+ A +   +M S GC     SY+ ++ G C+ +  E A
Sbjct: 315 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 374

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L  EM+ K   P+ V  NT    L +   +E+A  L ++M  +G   +  TY   ++G
Sbjct: 375 KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNG 434

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C  G +  A+ELF++   + C+ +   Y +L+ GLC + RL+ A EL   +      PN
Sbjct: 435 FCVQGRVDSALELFYS---MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 491

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVT+++++   C  G MD+A +L   M E+   PN+IT++ L+ G  +     + +ELLH
Sbjct: 492 VVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLH 551

Query: 439 KMKEINVMPDASIVSIVVDLLAKNE 463
            +    V PD    S ++ +L++ +
Sbjct: 552 GLVSNGVSPDIVTYSSIIGVLSRED 576



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 154/478 (32%), Positives = 230/478 (48%), Gaps = 47/478 (9%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD    T LI+ LC   R  +AA +       G   DVF Y TLV G CR      A  
Sbjct: 75  APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 134

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M            P+  TYT II GLC  G V +A  LL  M  +  +P+VVTYT 
Sbjct: 135 LIASMPVA---------PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTV 185

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++   C +  + +A  +  EM  +G  PN+VT+NVI++ +C+ G++D+A   L+ +  +G
Sbjct: 186 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG 245

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSM----------------------------- 230
            +PD  +Y T+L G C   R    +ELF  M                             
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 231 ---ESM---GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
              E M   GC       +I+IN  CK   ++ A    + M S G  PD + + T+  GL
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               + E A +L  EM R     +  T+ TFI  LC+ G I +A  L   +    CE +I
Sbjct: 366 CRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNI 425

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN+L++G C  GR++ ALELF S+PC    PN +TY+ ++ GLCN  ++D A +L  +
Sbjct: 426 VTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAE 482

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           M +    PNV+TF++L+  F +     + IEL+ +M E    P+    + ++D + K+
Sbjct: 483 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD 540



 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 145/423 (34%), Positives = 225/423 (53%), Gaps = 9/423 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV      L R+    F PD V++T+++KGLCA  R  +   LF ++    C P+  T+
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV   CR      A+ + E+M+ G+G     C  NT     +I+ +CK+G VD A + 
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGRVDDAFQF 342

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      P+ ++YT+V++G C A+ W +AK L  EM+ +   PN VTFN  +  LC+
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +++A+ L++ M +HG   +  TYN L++GFC+ GRV+ A ELF SM    CK    +
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTIT 459

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+ G C  + ++ A  L +EML K   P+VV  N L     +   ++ A +L ++M 
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   +  TY T +DG+ K+    EA+EL H L       DI  Y+S+I  L +  R+E
Sbjct: 520 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+++F  +    + P  V Y+ ++  LC     D A D F  M  N  +PN +T+  LI
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639

Query: 422 RGF 424
            G 
Sbjct: 640 EGL 642



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 227/460 (49%), Gaps = 9/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +L     P  VT+T L++ +C  +   +A  +  ++R  GC P++ TY
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NG+CR      A     E  N    +G   +P+TV+YTT++ GLC     +  +EL
Sbjct: 219 NVIINGMCREGRVDDA----REFLNRLSSYGF--QPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +KN  PN VT+  ++R FC       A ++  +M   G   N    N++++ +CK
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D+A + L+ M  +G  PD  +Y T+L G C   R   AKEL   M    C     +
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++  I   C+   IE A  L  +M   G + ++V +N L  G     +V+ A +LF  M 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 452

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
                 +T TY T + GLC    +  A EL   +    C  ++  +N L+   C+ G ++
Sbjct: 453 ---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+EL   +      PN++TY+ ++ G+  D   ++A +L   +  N V P+++T+  +I
Sbjct: 510 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 569

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               R +   + I++ H ++++ + P A I + ++  L K
Sbjct: 570 GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 609



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 171/334 (51%), Gaps = 9/334 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F  L  +     +PD +++T+++KGLC   R  +A  L  ++    C P+  T+
Sbjct: 334 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T +  LC+      A  L E+M+    E G  CE N VTY  +++G C +G VD A EL
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMS----EHG--CEVNIVTYNALVNGFCVQGRVDSALEL 447

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M     KPN +TYT+++ G C A+  + A  L  EM+ +   PNVVTFNV++   C+
Sbjct: 448 FYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G MDEA  L++ M++HG  P+  TYNTLLDG         A EL   + S G    + +
Sbjct: 505 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVT 564

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I    +   +E A+ ++  +   G++P  VI+N + + L +    + A   F  M 
Sbjct: 565 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV 624

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            NG   +  TY T I+GL    ++ E  +L   L
Sbjct: 625 SNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 155/292 (53%), Gaps = 10/292 (3%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           + K+C  P+ VTF + I  LC +  I +A  L  ++   GCE ++ TY  LVNG C    
Sbjct: 382 VRKNC-PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL LF         + + C+PNT+TYTT++ GLC    +D A ELL +M  K+  PN
Sbjct: 441 VDSALELF---------YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 491

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+  ++  FC     +EA  L  +MM+ G  PN++T+N ++D + K+   +EA  LL 
Sbjct: 492 VVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLH 551

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            ++ +GV PD  TY++++       RV  A ++F  ++ +G +     Y+ ++   CK  
Sbjct: 552 GLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRC 611

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
             +GA+  ++ M+S G  P+ + + TL  GL     ++    L  E+   GV
Sbjct: 612 NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 3/290 (1%)

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N  +  L     + EA+RL+D     G  PD +    L+   C  GR + A  +  + E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G    VF+Y+ L+ GYC+  +++ A  L + M    + PD   +  +  GL +  +V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  L D+M   G      TY   ++ +CK+    +A+E+   +R   C  +I  YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G+C+ GR++ A E    L      P+ V+Y+ ++ GLC   + +   +LF +M E   +P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           N +TFDML+R F R     + I++L +M       + ++ +IV++ + K 
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 155/332 (46%), Gaps = 3/332 (0%)

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  L+ +   +   P+V   T +IR  C     ++A R+       G   +V  +N ++
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              C+ G++D A RL+  M    V PDA+TY  ++ G C  GRV  A  L   M   GC+
Sbjct: 121 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
            +V +Y++L+   CK+     A+ +  EM +KG  P++V +N +  G+    +V+ A + 
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            + +   G   DT +Y T + GLC      +  ELF  +    C  +   ++ L+   C+
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 297

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G +E A+++   +       N    +I+I  +C  G++D A     +M      P+ I+
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  +++G  R        ELL +M   N  P+
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 150/323 (46%), Gaps = 3/323 (0%)

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +R      D  EA RL      +G  P+V     ++  LC+ G+  +A+R+L    + G 
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D F YNTL+ G+C  G+++ A+ L  SM         ++Y+ +I G C    +  ALS
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALS 166

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +ML +G +P VV +  L   + +     +A ++ DEM+  G   +  TY   I+G+C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G + +A E  + L     + D  +Y +++ GLC + R E   ELF  +     +PN V
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T+ +++   C  G +++A  +   M  +    N    +++I    +        + L+ M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
                 PD    + V+  L + E
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAE 369


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 173/485 (35%), Positives = 255/485 (52%), Gaps = 39/485 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT++ L+  LC   +  EA  +F  +   G +P+V  Y  L++G           +L
Sbjct: 372 PDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDL 431

Query: 81  FEEM-ANG----NGEFGVVC------------------------EPNTVTYTTIIDGLCK 111
            + M ANG    N  F +V                          P+ VTY  +ID LCK
Sbjct: 432 LDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCK 491

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G VD A     QM +  + PN V + S++ G C    W +A+ LF EM DQGV+PNVV 
Sbjct: 492 LGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVF 551

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           FN IM  LC  G++  A RL+D M + GVRP+  +YNTL+ G CL GR + A +L   M 
Sbjct: 552 FNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMV 611

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           S+G K  + SY  L+ GYCK   I+ A  L+ EML KG+ P  V ++T+  GLF   +  
Sbjct: 612 SVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFS 671

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR----AY 347
            A +L+  M ++G   D +TY   ++GLCK   + EA ++F +L    C  D+R     +
Sbjct: 672 EAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSL----CSKDLRPNIITF 727

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
             +ID L K GR + A++LF S+P   LVPNVVTY IM+  +  +G +D+  +LFL ME+
Sbjct: 728 TIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEK 787

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS-- 465
           +   P+ +  + +IR  +   E  +    L K+ E+N   +AS  S+++ L ++ E    
Sbjct: 788 SGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNH 847

Query: 466 LNSLP 470
             SLP
Sbjct: 848 AKSLP 852



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 177/520 (34%), Positives = 257/520 (49%), Gaps = 76/520 (14%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVF 59
           +GR+ HGF   G ILK+ +  + V    L+ GLC   R+ EA   L  ++  FGC P+V 
Sbjct: 103 LGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVV 162

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           +  TL+ GLC       AL L   MA +G G     C PN VTY TIIDGLCK   VD+A
Sbjct: 163 SCNTLLKGLCNEKRVEEALELLHTMAEDGGGN----CTPNVVTYNTIIDGLCKAQAVDRA 218

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           + +L  M DK +K +VVTY+++I G C A+  + A+ +   M+D+GV+P+VVT+N I+D 
Sbjct: 219 EGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 278

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA--------------- 223
           LCK   +D A  +L  MI  GV+PD  TYNT++DG C    V+ A               
Sbjct: 279 LCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPD 338

Query: 224 -----------------KELFVSMESM---GCKHTVFSYSILINGYCKNKEIEGALSLYS 263
                            KE+   +E M   G    V +YS+L++  CKN +   A  ++ 
Sbjct: 339 IQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFY 398

Query: 264 EMLSKGIKPDVVIHNTLFVG---------------------------LFEI--------H 288
            M+ KGIKP+V I+  L  G                           +F I         
Sbjct: 399 CMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKA 458

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            ++ A  +F  M ++G++ D  TY   ID LCK G + +AV  F+ +       +   +N
Sbjct: 459 MIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFN 518

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           SL+ GLC   R E A ELF  +    + PNVV ++ ++  LCN+GQ+  A+ L   ME  
Sbjct: 519 SLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERV 578

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            V PNVI+++ LI G        +  +LL  M  + + PD
Sbjct: 579 GVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 246/487 (50%), Gaps = 41/487 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL  ++      D VT++++I GLC    +  A  +   +   G +PDV TY T+++GLC
Sbjct: 221 VLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLC 280

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  + + M +     GV  +P+ VTY TIIDGLCK   VD+A  +L  M DK+
Sbjct: 281 KAQAVDRAEGVLQHMIDK----GV--KPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD 334

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +KP++ TY  +I G+    +W E  R   EM  +G+ P+VVT+++++D LCKNGK  EA 
Sbjct: 335 VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEAR 394

Query: 190 R-----------------------------------LLDLMIQHGVRPDAFTYNTLLDGF 214
           +                                   LLDLM+ +G+ P+ + +N +L  +
Sbjct: 395 KIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAY 454

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
                ++ A  +F  M   G    V +Y ILI+  CK   ++ A+  +++M++ G+ P+ 
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNS 514

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V+ N+L  GL  + + E+A +LF EM   GV  +   + T +  LC  G ++ A  L  +
Sbjct: 515 VVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDS 574

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +  +    ++ +YN+LI G C +GR + A +L   +    L P++++Y  ++ G C  G+
Sbjct: 575 MERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGR 634

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D A  LF +M    V P  +T+  +++G       S+  EL   M +     D    +I
Sbjct: 635 IDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNI 694

Query: 455 VVDLLAK 461
           +++ L K
Sbjct: 695 ILNGLCK 701



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 230/481 (47%), Gaps = 48/481 (9%)

Query: 10  VLGRILKSC---FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           +  R+ ++C     PD  T++ L    C   RI    A F  +   G   +      L+N
Sbjct: 74  LFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLN 133

Query: 67  GLCRTSHTIVALN-LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
           GLC       A++ L   M     EFG  C PN V+  T++ GLC E  V++A ELL  M
Sbjct: 134 GLCDAKRVDEAMDILLRRMP----EFG--CMPNVVSCNTLLKGLCNEKRVEEALELLHTM 187

Query: 126 KDK---NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +    N  PNVVTY ++I G C A+  + A+ +   M+D+GV+ +VVT++ I+D LCK 
Sbjct: 188 AEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKA 247

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
             +D A  +L  MI  GV+PD  TYNT++DG C    V+ A+ +   M   G K  V +Y
Sbjct: 248 QAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTY 307

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + +I+G CK + ++ A  +   M+ K +KPD+  +N L  G     + +   +  +EM  
Sbjct: 308 NTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYA 367

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG--------- 353
            G+  D  TY   +D LCKNG   EA ++F+ +     + ++  Y  L+ G         
Sbjct: 368 RGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIAD 427

Query: 354 -----------------------LC---KSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
                                  LC   K   ++ A+ +F  +    L P+VVTY I+I 
Sbjct: 428 LTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILID 487

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC  G++D A   F  M  + V PN + F+ L+ G   ++   K  EL  +M +  V P
Sbjct: 488 ALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRP 547

Query: 448 D 448
           +
Sbjct: 548 N 548



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 202/415 (48%), Gaps = 18/415 (4%)

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP----NTVTYTTIIDGLC 110
            PD+ TY+ L    CR             + +G   FG++ +     N V    +++GLC
Sbjct: 87  RPDLCTYSILTGCFCR----------LGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLC 136

Query: 111 KEGFVDKAKELLLQ-MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---VQ 166
               VD+A ++LL+ M +    PNVV+  ++++G C  K   EA  L   M + G     
Sbjct: 137 DAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCT 196

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           PNVVT+N I+D LCK   +D A  +L  MI  GV+ D  TY+T++DG C    V+ A+ +
Sbjct: 197 PNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGV 256

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              M   G K  V +Y+ +I+G CK + ++ A  +   M+ KG+KPDVV +NT+  GL +
Sbjct: 257 LQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCK 316

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              V+RA  +   M    V  D  TY   I G    G   E V     +     + D+  
Sbjct: 317 AQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVT 376

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y+ L+D LCK+G+   A ++F  +    + PNV  Y I++ G    G +    DL   M 
Sbjct: 377 YSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMV 436

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            N + PN   F++++  + +     + + +  +M +  + PD     I++D L K
Sbjct: 437 ANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCK 491



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 169/328 (51%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV    +   +++    TP++V F SL+ GLC   R  +A  LF ++   G  P+V  
Sbjct: 492 LGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVF 551

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T++  LC     +VA  L + M        V   PN ++Y T+I G C  G  D+A +
Sbjct: 552 FNTIMCNLCNEGQVMVAQRLIDSMER------VGVRPNVISYNTLIGGHCLAGRTDEAAQ 605

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M    +KP++++Y +++RG+C     + A  LF EM+ +GV P  VT++ I+  L 
Sbjct: 606 LLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLF 665

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
              +  EA  L   MI+ G + D +TYN +L+G C T  V+ A ++F S+ S   +  + 
Sbjct: 666 HTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNII 725

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++I+I+   K    + A+ L++ + S G+ P+VV +  +   + +   ++    LF  M
Sbjct: 726 TFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAM 785

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           +++G   D+      I  L   G I+ A
Sbjct: 786 EKSGCTPDSVMLNAIIRSLLGRGEIMRA 813



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 157/302 (51%), Gaps = 4/302 (1%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V+P++ T++++    C+ G+++       L+++ G R +    N LL+G C   RV+ A 
Sbjct: 86  VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145

Query: 225 ELFVS-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVVIHNTL 280
           ++ +  M   GC   V S + L+ G C  K +E AL L   M   G     P+VV +NT+
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +   V+RA  +   M   GV  D  TY T IDGLCK   +  A  +   +     
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV 265

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D+  YN++IDGLCK+  ++ A  + + +    + P+VVTY+ +I GLC    +D+A  
Sbjct: 266 KPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADG 325

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           +   M +  V P++ T++ LI G++   E  +V+  L +M    + PD    S+++D L 
Sbjct: 326 VLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLC 385

Query: 461 KN 462
           KN
Sbjct: 386 KN 387



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 6/265 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +L  ++     PD +++ +L++G C   RI  A  LF ++   G  P   TY
Sbjct: 598 GRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTY 657

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +T++ GL  T     A  L+  M     ++ +       TY  I++GLCK   VD+A ++
Sbjct: 658 STILQGLFHTRRFSEAKELYLNMIKSGQQWDIY------TYNIILNGLCKTNCVDEAFKI 711

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K+++PN++T+T +I          +A  LF  +   G+ PNVVT+ ++M  + +
Sbjct: 712 FQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQ 771

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +DE   L   M + G  PD+   N ++      G +  A      ++ M       +
Sbjct: 772 EGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEAST 831

Query: 242 YSILINGYCKNKEIEGALSLYSEML 266
            S+LI+ + + +    A SL  + L
Sbjct: 832 TSLLISLFSREEYKNHAKSLPEKYL 856


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  288 bits (737), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 150/445 (33%), Positives = 248/445 (55%), Gaps = 11/445 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PDA T+T LI+ LC   R+ +A +L   +   GC+P+V TYT L+  +CR S    A+ 
Sbjct: 140 APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMA 199

Query: 80  LFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           + +EM A G       C PN VTY  II+G+C+EG VD A+ELL ++     +P+ V+YT
Sbjct: 200 VLDEMRAKG-------CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYT 252

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++++G C +K W++ + LF EMM++   PN VTF++++   C+ G ++ A ++L+ M +H
Sbjct: 253 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEH 312

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G   +    N +++  C  GRV+ A +L   M S GC     SY+ ++ G C+ +  + A
Sbjct: 313 GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDA 372

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L +EM+     P+ V  NT    L +   +E+A  L ++M  +G      TY   ++G
Sbjct: 373 KELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNG 432

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C  G+I  A+ELF   R + C+ +   Y +L+ GLC + RL+ A EL   +  G   PN
Sbjct: 433 FCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPN 489

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVT+++++   C  G +++A +L   M E+   PN+IT++ L+ G  +       +ELLH
Sbjct: 490 VVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLH 549

Query: 439 KMKEINVMPDASIVSIVVDLLAKNE 463
            +    V PD    S ++ +L+K +
Sbjct: 550 GLVSKGVSPDVITFSSIIGILSKED 574



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/485 (32%), Positives = 237/485 (48%), Gaps = 47/485 (9%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD    T LI+ LC   R  +AA +       G   DVF Y TLV G CR  H   A  
Sbjct: 73  APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 132

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M            P+  TYT +I  LC  G V  A  LL  M  +  +PNVVTYT 
Sbjct: 133 LIGSMPVA---------PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 183

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++   C    + +A  +  EM  +G  PN+VT+NVI++ +C+ G++D+A  LL+ +  +G
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSM----------------------------- 230
            +PD  +Y TLL G C + R +  +ELF  M                             
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303

Query: 231 ---ESM---GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
              E M   GC       +I+IN  CK   ++ A  L ++M S G  PD + + T+  GL
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               + + A +L +EM RN    +  T+ TFI  LC+ G I +A+ L   +    C   +
Sbjct: 364 CRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGV 423

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN+L++G C  G ++ ALELFRS+PC    PN +TY+ ++ GLCN  ++D A +L  +
Sbjct: 424 VTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAE 480

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M      PNV+TF++L+  F +     + IEL+ +M E    P+    + ++D + K+  
Sbjct: 481 MLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCS 540

Query: 465 SLNSL 469
           S ++L
Sbjct: 541 SEDAL 545



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/423 (34%), Positives = 225/423 (53%), Gaps = 9/423 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L R+    F PD V++T+L+KGLCA  R  +   LF ++    C P+  T+
Sbjct: 227 GRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 286

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+   CR      A+ + E+M     E G  C  NT     +I+ +CK+G VD A +L
Sbjct: 287 DMLIRFFCRGGMVERAIQVLEQMT----EHG--CATNTTLCNIVINSICKQGRVDDAFKL 340

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      P+ ++YT+V++G C A+ W++AK L  EM+     PN VTFN  +  LC+
Sbjct: 341 LNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ 400

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +++A  L++ M +HG      TYN L++GFC+ G ++ A ELF    SM CK    +
Sbjct: 401 KGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTIT 457

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+ G C  + ++GA  L +EML     P+VV  N L     +   +E A +L ++M 
Sbjct: 458 YTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   +  TY T +DG+ K+    +A+EL H L       D+  ++S+I  L K  R+E
Sbjct: 518 EHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIE 577

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++LF  +    + P  V Y+ ++ GLC   ++D A D F  M  N  +PN  T+ +LI
Sbjct: 578 EAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILI 637

Query: 422 RGF 424
            G 
Sbjct: 638 EGL 640



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 171/334 (51%), Gaps = 9/334 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F +L  +      PD +++T+++KGLC   R  +A  L  ++    C P+  T+
Sbjct: 332 GRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTF 391

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T +  LC+      A+ L E+M+      GVV      TY  +++G C +G +D A EL
Sbjct: 392 NTFICILCQKGLIEQAIMLIEQMSEHGCTVGVV------TYNALVNGFCVQGHIDSALEL 445

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M     KPN +TYT+++ G C A+  + A  L  EM+     PNVVTFNV++   C+
Sbjct: 446 FRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQ 502

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++EA  L++ M++HG  P+  TYNTLLDG         A EL   + S G    V +
Sbjct: 503 KGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVIT 562

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +S +I    K   IE A+ L+  +   G++P  V++N + +GL +  +++ A   F  M 
Sbjct: 563 FSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMV 622

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            NG   +  TY   I+GL   G + EA +L   L
Sbjct: 623 SNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVL 656



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 180/369 (48%), Gaps = 9/369 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     VL ++ +     +      +I  +C + R+ +A  L   +  +GC PD  +Y
Sbjct: 297 GMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISY 356

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TT++ GLCR      A  L  EM   N      C PN VT+ T I  LC++G +++A  L
Sbjct: 357 TTVLKGLCRAERWDDAKELLNEMVRNN------CPPNEVTFNTFICILCQKGLIEQAIML 410

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + QM +      VVTY +++ GFC     + A  LF  M     +PN +T+  ++  LC 
Sbjct: 411 IEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCN 467

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++D A+ L+  M++    P+  T+N L+  FC  G +  A EL   M   GC   + +
Sbjct: 468 AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLIT 527

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G  K+   E AL L   ++SKG+ PDV+  +++   L +  ++E A +LF  +Q
Sbjct: 528 YNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQ 587

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+      Y   + GLCK   I  A++ F  +    C  +   Y  LI+GL   G L+
Sbjct: 588 DIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLK 647

Query: 362 IALELFRSL 370
            A +L   L
Sbjct: 648 EAQDLLSVL 656



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 152/296 (51%), Gaps = 9/296 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  ++++   P+ VTF + I  LC +  I +A  L  ++   GC   V TY  LVNG C
Sbjct: 375 LLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFC 434

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
              H   AL LF  M          C+PNT+TYTT++ GLC    +D A EL+ +M   +
Sbjct: 435 VQGHIDSALELFRSMP---------CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGD 485

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PNVVT+  ++  FC      EA  L  +MM+ G  PN++T+N ++D + K+   ++A 
Sbjct: 486 CPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDAL 545

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  ++  GV PD  T+++++       R+  A +LF  ++ +G +     Y+ ++ G 
Sbjct: 546 ELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGL 605

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           CK  EI+ A+  ++ M+S G  P+   +  L  GL     ++ A  L   +   GV
Sbjct: 606 CKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 3/300 (1%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G  P+V     ++  LC+ G+  +A+R+L      G   D F YNTL+ G+C  G ++ A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           + L   + SM      ++Y+ LI   C    +  ALSL  +ML +G +P+VV +  L   
Sbjct: 131 RRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           +      E+A  + DEM+  G   +  TY   I+G+C+ G + +A EL + L     + D
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
             +Y +L+ GLC S R +   ELF  +     +PN VT+ ++I   C  G +++A  +  
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            M E+    N    +++I    +        +LL+ M      PD    + V+  L + E
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 9/176 (5%)

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G A D +     I  LC+ G   +A  +           D+ AYN+L+ G C+ G L+ 
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  L  S+P   + P+  TY+ +I  LC+ G++  A  L  DM      PNV+T+ +L+ 
Sbjct: 130 ARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN------EISLNSLPSF 472
              R +   + + +L +M+     P+    +++++ + +          LN LPS+
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSY 242


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  288 bits (737), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 155/444 (34%), Positives = 245/444 (55%), Gaps = 11/444 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA T+T +I+GLC   R+ +A AL   +   GC+P V TYT L+  +C++S    A+N+
Sbjct: 139 PDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNV 198

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            +EM A G       C PN VTY  II+G+C+EG VD AKE+L ++     +P++V+YT+
Sbjct: 199 LDEMRAKG-------CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTT 251

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C A+ W++ K LF EM+D+   PN VTF++++   C+ G ++ A ++L  M QHG
Sbjct: 252 VLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG 311

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+    N +++  C  GRV+ A +   +M   GC     SY+ ++ G C+    E A 
Sbjct: 312 CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAK 371

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  EM+ K   P+ V  NT    L +   +E+A KL + M   G +    TY   + G 
Sbjct: 372 ELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGF 431

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C  G +  A+ELF+    L CE +   Y +L+ GLC + RL+ A EL   +       N 
Sbjct: 432 CVQGRVDSALELFNN---LPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNA 488

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT+++++   C  G +++A +L   M E+   PN+ITF+ L+ G  +     + +ELLH 
Sbjct: 489 VTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHG 548

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           +    V  D    S VVD+L++ +
Sbjct: 549 LVSKGVSLDTITYSSVVDVLSRED 572



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/478 (30%), Positives = 224/478 (46%), Gaps = 47/478 (9%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD    T LI+ LC   R  +AA +       G   DVF Y TLV G CR      A  
Sbjct: 71  APDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARR 130

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M            P+  TYT II GLC  G V  A  LL  M  +  +P+VVTYT 
Sbjct: 131 LIASMP---------VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTV 181

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++   C +  + EA  +  EM  +G  PN+VT+NVI++ +C+ G++D+A  +L+ +  +G
Sbjct: 182 LLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYG 241

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFV------------------------------- 228
            +PD  +Y T+L G C   R +  K LF                                
Sbjct: 242 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAI 301

Query: 229 ----SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
                M   GC       +I+IN  CK   ++ A    + M   G  PD + + T+  GL
Sbjct: 302 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGL 361

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               + E A +L  EM R     +  T+ TFI  LC+ G I +A++L   +    C   I
Sbjct: 362 CRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGI 421

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN+L+ G C  GR++ ALELF +LPC    PN +TY+ ++ GLC+  ++D A +L   
Sbjct: 422 VTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAG 478

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           M +     N +TF++L+  F +     + +EL+++M E    P+    + ++D + K+
Sbjct: 479 MIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKD 536



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/423 (32%), Positives = 219/423 (51%), Gaps = 9/423 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L R+    F PD V++T+++KGLCA  R  +   LF ++    C P+  T+
Sbjct: 225 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 284

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV   CR      A+ + ++M+         C PNT     +I+ +CK+G VD A + 
Sbjct: 285 DMLVRFFCRGGMVERAIQVLQQMSQHG------CTPNTTLCNIVINAICKQGRVDDAYDF 338

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      P+ ++YT+V+RG C A  W  AK L  EM+ +   PN VTFN  +  LC+
Sbjct: 339 LNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQ 398

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +++A +L++LM ++G      TYN L+ GFC+ GRV+ A ELF    ++ C+    +
Sbjct: 399 KGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF---NNLPCEPNTIT 455

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+ G C  + ++ A  L + M+ K    + V  N L     +   VE A +L ++M 
Sbjct: 456 YTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMM 515

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   +  T+ T +DG+ K+    EA+EL H L       D   Y+S++D L +  R E
Sbjct: 516 EHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTE 575

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+++  ++    + P V  Y+ ++  LC   + D+A D F  M  N  +PN  T+ +LI
Sbjct: 576 EAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 635

Query: 422 RGF 424
            G 
Sbjct: 636 EGL 638



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 144/278 (51%), Gaps = 3/278 (1%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           + EA+RL++     G  PD +    L+   C  GR + A  +  + E+ G    VF+Y+ 
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L+ GYC+   ++ A  L + M    + PD   +  +  GL +  +V  A  L D+M + G
Sbjct: 115 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
                 TY   ++ +CK+    EA+ +   +R   C  +I  YN +I+G+C+ GR++ A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E+   L      P++V+Y+ ++ GLC   + D  + LF +M +   VPN +TFDML+R F
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            R     + I++L +M +    P+ ++ +IV++ + K 
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 329



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 150/304 (49%), Gaps = 9/304 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR  H   +L  +++    P+ VTF + I  LC +  I +A  L   +  +GC   + TY
Sbjct: 365 GRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTY 424

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+G C       AL LF  +          CEPNT+TYTT++ GLC    +D A EL
Sbjct: 425 NALVHGFCVQGRVDSALELFNNLP---------CEPNTITYTTLLTGLCHAERLDAAAEL 475

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  K+   N VT+  ++  FC      EA  L  +MM+ G  PN++TFN ++D + K
Sbjct: 476 LAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITK 535

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +   +EA  LL  ++  GV  D  TY++++D      R   A ++  +++ MG +  V  
Sbjct: 536 DCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGM 595

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++   CK  E + A+  ++ M+S G  P+   +  L  GL     ++ A  +  E+ 
Sbjct: 596 YNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELY 655

Query: 302 RNGV 305
             GV
Sbjct: 656 AKGV 659



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 144/308 (46%), Gaps = 3/308 (0%)

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +R      D  EA RL      +G  P+V     ++  LC+ G+  +A+R+L      G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D F YNTL+ G+C  GR++ A+ L  SM         ++Y+ +I G C    +  AL+
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +ML +G +P VV +  L   + +      A  + DEM+  G   +  TY   I+G+C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G + +A E+ + L     + DI +Y +++ GLC + R +    LF  +     VPN V
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T+ +++   C  G +++A  +   M ++   PN    +++I    +        + L+ M
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 441 KEINVMPD 448
                 PD
Sbjct: 343 GMYGCNPD 350


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  288 bits (736), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 143/396 (36%), Positives = 233/396 (58%), Gaps = 6/396 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  TF  +I   C   ++  A ++  K+   G EPD  T  +LVNG CR +    A++L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           ++M     E G   +P+ V Y  IID LCK   V+ A +   +++ K I+PNVVTYT+++
Sbjct: 179 DKMV----EIGY--KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +  W++A RL  +M+ + + PNV+T++ ++D   KNGK+ EA  L + M++  + 
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY++L++G CL  R++ A ++F  M S GC   V SY+ LING+CK K +E  + L
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EM  +G+  + V +NTL  G F+   V++A + F +M   G++ D WTY   + GLC 
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           NG + +A+ +F  ++  + + DI  Y ++I G+CK+G++E A  LF SL    L P++VT
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           Y+ M+ GLC  G + +   L+  M++  ++ N  T 
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/413 (32%), Positives = 221/413 (53%), Gaps = 14/413 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +VS    +LG++LK  + PD VT  SL+ G C  +R+ +A +L  K+   G +PD+  Y 
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++ LC+T     A + F+E+       G+   PN VTYT +++GLC       A  LL
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERK----GI--RPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  K I PNV+TY++++  F       EAK LF EM+   + P++VT++ +++ LC +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DEA+++ DLM+  G   D  +YNTL++GFC   RV    +LF  M   G      +Y
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+ +  +++ A   +S+M   GI PD+  +N L  GL +  ++E+A  +F++MQ+
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D  TY T I G+CK G + EA  LF +L +   + DI  Y +++ GLC  G L  
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
              L+  +    L+ N  T S        DG +  + +L   M      P+++
Sbjct: 489 VEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 193/366 (52%), Gaps = 6/366 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A++LF +M            P+ V +  ++  + K    D    L  +M+   I+ ++ T
Sbjct: 69  AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           +  VI  FC     + A  +  +M+  G +P+ VT   +++  C+  ++ +A  L+D M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G +PD   YN ++D  C T RVN A + F  +E  G +  V +Y+ L+NG C +    
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L S+M+ K I P+V+ ++ L     +  +V  A +LF+EM R  +  D  TY + I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLC +  I EA ++F  +    C  D+ +YN+LI+G CK+ R+E  ++LFR +    LV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            N VTY+ +I G    G +DKA++ F  M+   + P++ T+++L+ G     E  K + +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 437 LHKMKE 442
              M++
Sbjct: 423 FEDMQK 428



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 179/348 (51%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P++V +  ++      K ++    L  +M   G++ ++ TFN++++  C   ++  A  +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  M++ G  PD  T  +L++GFC   RV+ A  L   M  +G K  + +Y+ +I+  CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            K +  A   + E+  KGI+P+VV +  L  GL    +   A +L  +M +  +  +  T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   +D   KNG ++EA ELF  +  +  + DI  Y+SLI+GLC   R++ A ++F  + 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
               + +VV+Y+ +I G C   +++    LF +M +  +V N +T++ LI+GF +  +  
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           K  E   +M    + PD    +I++  L  N     +L  F   +++E
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 141/274 (51%), Gaps = 14/274 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +   +++    PD VT++SLI GLC   RI EA  +F  +   GC  DV +Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG C+       + LF EM+    + G+V   NTVTY T+I G  + G VDKA+E 
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMS----QRGLV--SNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM    I P++ TY  ++ G C   +  +A  +F +M  + +  ++VT+  ++  +CK
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK++EA  L   +   G++PD  TY T++ G C  G ++  + L+  M+  G      +
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            S        + +I  +  L  +MLS G  P ++
Sbjct: 508 LS--------DGDITLSAELIKKMLSCGYAPSLL 533



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 131/257 (50%), Gaps = 3/257 (1%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+++A  L   M++    P    +N LL       + +    L   ME +G ++ +++++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I+IN +C   ++  ALS+  +ML  G +PD V   +L  G    ++V  A  L D+M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D   Y   ID LCK   + +A + F  +       ++  Y +L++GLC S R   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             L   +    + PNV+TYS ++     +G++ +A++LF +M   ++ P+++T+  LI G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 424 FI---RINEPSKVIELL 437
                RI+E +++ +L+
Sbjct: 305 LCLHDRIDEANQMFDLM 321



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 122/239 (51%)

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           ++N A +LF  M       ++  ++ L++   K K+ +  +SL  +M   GI+ D+   N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            +        QV  A  +  +M + G   D  T  + ++G C+   + +AV L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             + DI AYN++ID LCK+ R+  A + F+ +    + PNVVTY+ ++ GLCN  +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             L  DM +  + PNVIT+  L+  F++  +  +  EL  +M  +++ PD    S +++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 167/467 (35%), Positives = 257/467 (55%), Gaps = 10/467 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M + + GF VLG + K    P  VT  +++ GLC E  +  A  L  K+   G   +  T
Sbjct: 123 MRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNART 182

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  LVNGLC+   T  AL   ++M   N        PN V Y  I+DGLCK G V +A  
Sbjct: 183 YGALVNGLCKIGDTSGALECLKKMVKRN------LGPNVVVYNAILDGLCKRGLVGEALG 236

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYA-KDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDE 178
           LL +M   N++PNVVTY  +I+G C     W E   LF EM+ ++G+ P+V TF++++D 
Sbjct: 237 LLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDG 296

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCK 236
            CK G +  A  ++  M++ GV P+  TYN+L+ G+CL  ++  A  +F  M  E  GC 
Sbjct: 297 FCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCL 356

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
            +V +++ LI+G+CK KE++ A+SL SEM+ KG+ PDV    +L  G  E+ +   A +L
Sbjct: 357 PSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAAREL 416

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F  M+ +G   +  T    +DGL K     EAV LF  +     + DI  YN ++DG+CK
Sbjct: 417 FFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCK 476

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G+L  A +L   +    L  +  TY+IMI GLC +G +D A +L   M+EN   PN  +
Sbjct: 477 MGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCS 536

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +++ ++G +R  + ++  + L  MK+     DA+   +++  L+ NE
Sbjct: 537 YNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFLSANE 583



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 156/338 (46%), Gaps = 49/338 (14%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           +V T N+ ++ LC   K      +L LM + G+ P   T NT+++G C+ G VNHA  L 
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             ME++G      +Y  L+NG CK  +  GAL    +M+ + + P+VV++N +  GL + 
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKR 228

Query: 288 HQVERAFKLFDEM-------------------------------------QRNGVAADTW 310
             V  A  L  EM                                        G+  D  
Sbjct: 229 GLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQ 288

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           T+   +DG CK G ++ A  +   +  +  E ++  YNSLI G C   ++E A+ +F   
Sbjct: 289 TFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVF--- 345

Query: 371 PCGVLV-------PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             G++V       P+VVT++ +I G C   ++DKA  L  +M    + P+V T+  LI G
Sbjct: 346 --GLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGG 403

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F  + +P    EL   MKE   +P+    ++V+D L K
Sbjct: 404 FCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLK 441



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 6/234 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT  SLI G C    + +A +L +++   G +PDVFT+T+L+ G C     + A  L
Sbjct: 357 PSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAAREL 416

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  M     E G V  PN  T   ++DGL K     +A  L   M    +  ++V Y  +
Sbjct: 417 FFTMK----EHGQV--PNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIM 470

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C     N+A++L   ++ +G++ +  T+N+++  LC+ G +D+A  LL  M ++G 
Sbjct: 471 LDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGC 530

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
            P+  +YN  + G      +  +++    M+  G      +  +LI     N+E
Sbjct: 531 PPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFLSANEE 584


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  287 bits (735), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 159/449 (35%), Positives = 245/449 (54%), Gaps = 7/449 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
             +S  F +LG ILK  F P+ VTF +LI G C    + +A A    L   G   D F+Y
Sbjct: 104 AHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSY 163

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC+   T  AL L ++M         +  PN +TY+T+IDGLCK+  +  A  L
Sbjct: 164 GSLINGLCKNGQTRDALQLLQKMEED------LVRPNLITYSTVIDGLCKDRLIADALRL 217

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  + I  +VV Y S+I G C    W EA RL   M+   + P+  TFN+++D LCK
Sbjct: 218 FSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCK 277

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA  +  +M++ G +PD  TYN L++GFCL+  V+ A+ELF  M   G +  V +
Sbjct: 278 EGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLN 337

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++LINGYCK   ++ A+ L+ E+  K + P++  +N+L  GL ++ ++    +L DEM 
Sbjct: 338 YNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMC 397

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G + D  TY  F+D  CK+    +A+ LF  + +     D   Y+ +++  CK  +L+
Sbjct: 398 DRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLK 456

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           IA E  + L      PNV TY+IMI  LC D   D+A  L   M++N   P+ +TF+ +I
Sbjct: 457 IAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII 516

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDAS 450
                 NE  K  +L  +M E  ++ D +
Sbjct: 517 GALQERNETDKAEKLRLEMIERGLVNDEA 545



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 215/423 (50%), Gaps = 10/423 (2%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P +F +  L+  + R  H   A++LF ++ +     G+   P+  T T +I+  C +  +
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSK----GIT--PSIATLTILINCYCHQAHL 106

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A  LL  +     +PN+VT+ ++I GFC     ++A    +++M +G   +  ++  +
Sbjct: 107 SFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSL 166

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++ LCKNG+  +A +LL  M +  VRP+  TY+T++DG C    +  A  LF  + S G 
Sbjct: 167 INGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGI 226

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +Y+ LI+G C   +   A  L + M+   I PD    N L   L +  ++  A  
Sbjct: 227 LVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQG 286

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +F  M + G   D  TY   ++G C +  + EA ELF+ +     E D+  YN LI+G C
Sbjct: 287 VFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYC 346

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K   ++ A+ LF+ + C  LVPN+ TY+ +I GLC  G+M   ++L  +M +    P+++
Sbjct: 347 KIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIV 406

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE---ISLNSLPSF 472
           T+++ +  F +     K I L  ++ +  + PD  +  ++V+   K E   I+  +L   
Sbjct: 407 TYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHL 465

Query: 473 TVH 475
            +H
Sbjct: 466 LIH 468



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 180/375 (48%), Gaps = 35/375 (9%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M  K+  P +  +  ++        +  A  LF ++  +G+ P++ T  ++++  C   
Sbjct: 45  RMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQA 104

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +  A  LL  +++ G +P+  T+NTL++GFC+ G V+ A    + + + G     FSY 
Sbjct: 105 HLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYG 164

Query: 244 ILINGYCKNKE-----------------------------------IEGALSLYSEMLSK 268
            LING CKN +                                   I  AL L+S + S+
Sbjct: 165 SLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSR 224

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           GI  DVV +N+L  G   + Q   A +L   M R  +  D +T+   +D LCK G IVEA
Sbjct: 225 GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEA 284

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
             +F  +     + DI  YN+L++G C S  +  A ELF  +    L P+V+ Y+++I G
Sbjct: 285 QGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING 344

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C    +D+A  LF ++    +VPN+ T++ LI G  ++   S V EL+ +M +    PD
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPD 404

Query: 449 ASIVSIVVDLLAKNE 463
               +I +D   K++
Sbjct: 405 IVTYNIFLDAFCKSK 419



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 155/301 (51%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F  M+ +   P +  F+ ++  + + G    A  L   +   G+ P   T   L++ +C 
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
              ++ A  L  ++  MG +  + +++ LING+C N  +  A++   ++++KG   D   
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +L  GL +  Q   A +L  +M+ + V  +  TY T IDGLCK+  I +A+ LF  + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 D+ AYNSLI G C  G+   A  L   +  G + P+  T++I++  LC +G++ 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A+ +F  M +    P+++T++ L+ GF   N  S+  EL ++M +  + PD    ++++
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 457 D 457
           +
Sbjct: 343 N 343



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 82/189 (43%)

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           + H V+     F+ M R       + +   +  + + G+   A+ LF  L        I 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
               LI+  C    L  A  L  ++      PN+VT++ +I G C +G + KA    LD+
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
                  +  ++  LI G  +  +    ++LL KM+E  V P+    S V+D L K+ + 
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 466 LNSLPSFTV 474
            ++L  F++
Sbjct: 212 ADALRLFSL 220


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  287 bits (735), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 166/511 (32%), Positives = 272/511 (53%), Gaps = 58/511 (11%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + VTFT+L+ GLC E R+++A AL  ++   G +PD  TY T+VNG+C+   T+ ALN+ 
Sbjct: 9   NVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNML 68

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M           + N V Y+ I+D LCK+G   KA+ +  +M +K I PNV+TY  +I
Sbjct: 69  RKMDESQ------IKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMI 122

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C    W++A++L  +M+++ + P+VVTF+ +++   K GK+  A  L   M++  + 
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE--IEG-- 257
           P   TY++++DGFC   R+  AK +F  M S GC   + + + LI+G C+ K   I G  
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242

Query: 258 -------ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
                  A  L+ EM+S G+ PD+V  NTL  GL E  ++E+A ++F   Q++ +  DT 
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI-----------------RA------- 346
           T    I+G+CK   + EA +LF++L +   E D+                 RA       
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362

Query: 347 -----------YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                      YNS++DG CK  RLE A ++  S+      P+VVT+S +I G C  G++
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA-SIVSI 454
           D   +LF +M +  +V + IT++ LI GF ++ + +   ++  +M    V PD  +  S+
Sbjct: 423 DDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSM 482

Query: 455 VVDLLAKNEIS-----LNSLPSFTVHEQQEE 480
           +  L  K E+      L  L     HE +++
Sbjct: 483 LAGLCTKAELQKGLTMLEDLQKSVDHELEDD 513



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 139/415 (33%), Positives = 232/415 (55%), Gaps = 17/415 (4%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           GC  +V T+TTL+NGLCR    + AL L + M     +      P+ VTY TI++G+CK 
Sbjct: 5   GCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQ------PDAVTYGTIVNGMCKL 58

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G    A  +L +M +  IK NVV Y++++   C   +  +A+ +F EM ++G+ PNV+T+
Sbjct: 59  GDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTY 118

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++D  C  GK  +A +LL  MI+  + PD  T++ L++ F   G+V+ A+EL+  M  
Sbjct: 119 NCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLR 178

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF----------- 281
                T  +YS +I+G+CK+  +E A  ++  M+SKG  PD++  NTL            
Sbjct: 179 RNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLI 238

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G  ++  V  A  LF EM  NGV+ D  T  T + GLC+NG + +A+E+F   +  K +
Sbjct: 239 HGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMD 298

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D    N +I+G+CK  +++ A +LF SLP   +  +VVTY+I+IG    +G   +A D+
Sbjct: 299 LDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDI 358

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +L+M    ++P+ +T++ ++ GF + N   +  +++  M      PD    S ++
Sbjct: 359 YLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLI 413



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 180/347 (51%), Gaps = 19/347 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+VS    +   +L+    P  +T++S+I G C  SR+ +A  +F  +   GC PD+ T 
Sbjct: 164 GKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITL 223

Query: 62  TTLVNGLCRTSHTI-----------VALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGL 109
            TL++G CR    +           VA +LF+EM +NG         P+ VT  T++ GL
Sbjct: 224 NTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNG-------VSPDIVTCNTLLAGL 276

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           C+ G ++KA E+    +   +  +  T   +I G C     +EA  LF  +   GV+ +V
Sbjct: 277 CENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDV 336

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           VT+N+++    K G    A  +   M+  G+ P   TYN+++DGFC   R+  A+++  S
Sbjct: 337 VTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDS 396

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M S GC   V ++S LI GYCK   ++  L L+SEM  +G+  D + +N L  G  ++  
Sbjct: 397 MVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGD 456

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +  A  +F+EM  +GV  DT T+R+ + GLC    + + + +   L+
Sbjct: 457 LNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 176/348 (50%), Gaps = 11/348 (3%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M +     NVVT+T+++ G C      +A  L   M+++G QP+ VT+  I++ +CK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
              A  +L  M +  ++ +   Y+ ++D  C  G    A+ +F  M   G    V +Y+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+GYC   +   A  L  +M+ + I PDVV  + L     +  +V  A +L+ EM R  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS------- 357
           +   T TY + IDG CK+  + +A  +F  +    C  DI   N+LIDG C++       
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 358 ----GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
               G + +A +LF+ +    + P++VT + ++ GLC +G+++KA ++F   +++ +  +
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             T +++I G  + N+  +  +L + +    V  D    +I++ +  K
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVK 348



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 99/198 (50%)

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+  G   +VV   TL  GL    +V +A  L D M   G   D  TY T ++G+CK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
            V A+ +   +   + + ++  Y++++D LCK G    A  +F  +    + PNV+TY+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           MI G C+ G+   A  L  DM E  + P+V+TF  LI  F++  + S   EL  +M   N
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 445 VMPDASIVSIVVDLLAKN 462
           + P     S ++D   K+
Sbjct: 181 IFPTTITYSSMIDGFCKH 198


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  287 bits (735), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 149/445 (33%), Positives = 246/445 (55%), Gaps = 11/445 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PDA T+T +I+GLC   R+ EA +L   +   GC+P V TYT L+  +C+++    A+ 
Sbjct: 142 APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME 201

Query: 80  LFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           + +EM A G       C PN VTY  II+G+C+EG VD A+E L ++     +P+ V+YT
Sbjct: 202 VLDEMRAKG-------CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 254

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +V++G C AK W + + LF EMM++   PN VTF++++   C+ G ++ A ++L+ M  H
Sbjct: 255 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 314

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G   +    N +++  C  GRV+ A +   +M S GC     SY+ ++ G C+ +  E A
Sbjct: 315 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 374

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L  EM+ K   P+ V  NT    L +   +E+A  L ++M  +G   +  TY   ++G
Sbjct: 375 KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNG 434

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C  G +  A+ELF++   + C+ +   Y +L+ GLC + RL+ A EL   +      PN
Sbjct: 435 FCVQGRVDSALELFYS---MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 491

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVT+++++   C  G MD+A +L   M E+   PN+IT++ L+ G        + +ELLH
Sbjct: 492 VVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLH 551

Query: 439 KMKEINVMPDASIVSIVVDLLAKNE 463
            +    V PD    S ++ +L++ +
Sbjct: 552 GLVSNGVSPDIVTYSSIIGVLSRED 576



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/473 (32%), Positives = 227/473 (47%), Gaps = 47/473 (9%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD    T LI+ LC   R  +AA +       G   DVF Y TLV G CR      A  
Sbjct: 75  APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 134

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M            P+  TYT II GLC  G V +A  LL  M  +  +P+VVTYT 
Sbjct: 135 LIASMPVA---------PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTV 185

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++   C +  + +A  +  EM  +G  PN+VT+NVI++ +C+ G++D+A   L+ +  +G
Sbjct: 186 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG 245

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSM----------------------------- 230
            +PD  +Y T+L G C   R    +ELF  M                             
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 231 ---ESM---GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
              E M   GC       +I+IN  CK   ++ A    + M S G  PD + + T+  GL
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               + E A +L  EM R     +  T+ TFI  LC+ G I +A  L   +    CE +I
Sbjct: 366 CRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNI 425

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN+L++G C  GR++ ALELF S+PC    PN +TY+ ++ GLCN  ++D A +L  +
Sbjct: 426 VTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAE 482

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           M +    PNV+TF++L+  F +     + IEL+ +M E    P+    + ++D
Sbjct: 483 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/423 (34%), Positives = 224/423 (52%), Gaps = 9/423 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV      L R+    F PD V++T+++KGLCA  R  +   LF ++    C P+  T+
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV   CR      A+ + E+M+ G+G     C  NT     +I+ +CK+G VD A + 
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGRVDDAFQF 342

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      P+ ++YT+V++G C A+ W +AK L  EM+ +   PN VTFN  +  LC+
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +++A+ L++ M +HG   +  TYN L++GFC+ GRV+ A ELF SM    CK    +
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTIT 459

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+ G C  + ++ A  L +EML K   P+VV  N L     +   ++ A +L ++M 
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   +  TY T +DG+  +    EA+EL H L       DI  Y+S+I  L +  R+E
Sbjct: 520 EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+++F  +    + P  V Y+ ++  LC     D A D F  M  N  +PN +T+  LI
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639

Query: 422 RGF 424
            G 
Sbjct: 640 EGL 642



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 228/460 (49%), Gaps = 9/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +L     P  VT+T L++ +C  +   +A  +  ++R  GC P++ TY
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NG+CR      A     E  N    +G   +P+TV+YTT++ GLC     +  +EL
Sbjct: 219 NVIINGMCREGRVDDA----REFLNRLSSYGF--QPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +KN  PN VT+  ++R FC       A ++  +M   G   N    N++++ +CK
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D+A + L+ M  +G  PD  +Y T+L G C   R   AKEL   M    C     +
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++  I   C+   IE A  L  +M   G + ++V +N L  G     +V+ A +LF  M 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 452

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
                 +T TY T + GLC    +  A EL   +    C  ++  +N L+   C+ G ++
Sbjct: 453 ---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+EL   +      PN++TY+ ++ G+ ND   ++A +L   +  N V P+++T+  +I
Sbjct: 510 EAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSII 569

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               R +   + I++ H ++++ + P A I + ++  L K
Sbjct: 570 GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 609



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 171/334 (51%), Gaps = 9/334 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F  L  +     +PD +++T+++KGLC   R  +A  L  ++    C P+  T+
Sbjct: 334 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T +  LC+      A  L E+M+    E G  CE N VTY  +++G C +G VD A EL
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMS----EHG--CEVNIVTYNALVNGFCVQGRVDSALEL 447

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M     KPN +TYT+++ G C A+  + A  L  EM+ +   PNVVTFNV++   C+
Sbjct: 448 FYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G MDEA  L++ M++HG  P+  TYNTLLDG         A EL   + S G    + +
Sbjct: 505 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVT 564

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I    +   +E A+ ++  +   G++P  VI+N + + L +    + A   F  M 
Sbjct: 565 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV 624

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            NG   +  TY T I+GL    ++ E  +L   L
Sbjct: 625 SNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 154/292 (52%), Gaps = 10/292 (3%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           + K+C  P+ VTF + I  LC +  I +A  L  ++   GCE ++ TY  LVNG C    
Sbjct: 382 VRKNC-PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL LF         + + C+PNT+TYTT++ GLC    +D A ELL +M  K+  PN
Sbjct: 441 VDSALELF---------YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 491

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+  ++  FC     +EA  L  +MM+ G  PN++T+N ++D +  +   +EA  LL 
Sbjct: 492 VVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLH 551

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            ++ +GV PD  TY++++       RV  A ++F  ++ +G +     Y+ ++   CK  
Sbjct: 552 GLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRC 611

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
             +GA+  ++ M+S G  P+ + + TL  GL     ++    L  E+   GV
Sbjct: 612 NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 3/290 (1%)

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N  +  L     + EA+RL+D     G  PD +    L+   C  GR + A  +  + E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G    VF+Y+ L+ GYC+  +++ A  L + M    + PD   +  +  GL +  +V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  L D+M   G      TY   ++ +CK+    +A+E+   +R   C  +I  YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G+C+ GR++ A E    L      P+ V+Y+ ++ GLC   + +   +LF +M E   +P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           N +TFDML+R F R     + I++L +M       + ++ +IV++ + K 
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 155/332 (46%), Gaps = 3/332 (0%)

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  L+ +   +   P+V   T +IR  C     ++A R+       G   +V  +N ++
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              C+ G++D A RL+  M    V PDA+TY  ++ G C  GRV  A  L   M   GC+
Sbjct: 121 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
            +V +Y++L+   CK+     A+ +  EM +KG  P++V +N +  G+    +V+ A + 
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            + +   G   DT +Y T + GLC      +  ELF  +    C  +   ++ L+   C+
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 297

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G +E A+++   +       N    +I+I  +C  G++D A     +M      P+ I+
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  +++G  R        ELL +M   N  P+
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 150/323 (46%), Gaps = 3/323 (0%)

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +R      D  EA RL      +G  P+V     ++  LC+ G+  +A+R+L    + G 
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D F YNTL+ G+C  G+++ A+ L  SM         ++Y+ +I G C    +  ALS
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALS 166

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +ML +G +P VV +  L   + +     +A ++ DEM+  G   +  TY   I+G+C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G + +A E  + L     + D  +Y +++ GLC + R E   ELF  +     +PN V
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T+ +++   C  G +++A  +   M  +    N    +++I    +        + L+ M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
                 PD    + V+  L + E
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAE 369


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  287 bits (735), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 143/396 (36%), Positives = 233/396 (58%), Gaps = 6/396 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  TF  +I   C   ++  A ++  K+   G EPD  T  +LVNG CR +    A++L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           ++M     E G   +P+ V Y  IID LCK   V+ A +   +++ K I+PNVVTYT+++
Sbjct: 179 DKMV----EIGY--KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +  W++A RL  +M+ + + PNV+T++ ++D   KNGK+ EA  L + M++  + 
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY++L++G CL  R++ A ++F  M S GC   V SY+ LING+CK K +E  + L
Sbjct: 293 PDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EM  +G+  + V +NTL  G F+   V++A + F +M   G++ D WTY   + GLC 
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           NG + +A+ +F  ++  + + DI  Y ++I G+CK+G++E A  LF SL    L P++VT
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           Y+ M+ GLC  G + +   L+  M++  ++ N  T 
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508



 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/413 (32%), Positives = 221/413 (53%), Gaps = 14/413 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +VS    +LG++LK  + PD VT  SL+ G C  +R+ +A +L  K+   G +PD+  Y 
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++ LC+T     A + F+E+       G+   PN VTYT +++GLC       A  LL
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERK----GI--RPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  K I PNV+TY++++  F       EAK LF EM+   + P++VT++ +++ LC +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLH 308

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DEA+++ DLM+  G   D  +YNTL++GFC   RV    +LF  M   G      +Y
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+ +  +++ A   +S+M   GI PD+  +N L  GL +  ++E+A  +F++MQ+
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D  TY T I G+CK G + EA  LF +L +   + DI  Y +++ GLC  G L  
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
              L+  +    L+ N  T S        DG +  + +L   M      P+++
Sbjct: 489 VEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 193/366 (52%), Gaps = 6/366 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A++LF +M            P+ V +  ++  + K    D    L  +M+   I+ ++ T
Sbjct: 69  AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           +  VI  FC     + A  +  +M+  G +P+ VT   +++  C+  ++ +A  L+D M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G +PD   YN ++D  C T RVN A + F  +E  G +  V +Y+ L+NG C +    
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L S+M+ K I P+V+ ++ L     +  +V  A +LF+EM R  +  D  TY + +
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLC +  I EA ++F  +    C  D+ +YN+LI+G CK+ R+E  ++LFR +    LV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            N VTY+ +I G    G +DKA++ F  M+   + P++ T+++L+ G     E  K + +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 437 LHKMKE 442
              M++
Sbjct: 423 FEDMQK 428



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 179/348 (51%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P++V +  ++      K ++    L  +M   G++ ++ TFN++++  C   ++  A  +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  M++ G  PD  T  +L++GFC   RV+ A  L   M  +G K  + +Y+ +I+  CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            K +  A   + E+  KGI+P+VV +  L  GL    +   A +L  +M +  +  +  T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   +D   KNG ++EA ELF  +  +  + DI  Y+SL++GLC   R++ A ++F  + 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
               + +VV+Y+ +I G C   +++    LF +M +  +V N +T++ LI+GF +  +  
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           K  E   +M    + PD    +I++  L  N     +L  F   +++E
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 141/274 (51%), Gaps = 14/274 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +   +++    PD VT++SL+ GLC   RI EA  +F  +   GC  DV +Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG C+       + LF EM+    + G+V   NTVTY T+I G  + G VDKA+E 
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMS----QRGLV--SNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM    I P++ TY  ++ G C   +  +A  +F +M  + +  ++VT+  ++  +CK
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK++EA  L   +   G++PD  TY T++ G C  G ++  + L+  M+  G      +
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            S        + +I  +  L  +MLS G  P ++
Sbjct: 508 LS--------DGDITLSAELIKKMLSCGYAPSLL 533



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 131/257 (50%), Gaps = 3/257 (1%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+++A  L   M++    P    +N LL       + +    L   ME +G ++ +++++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I+IN +C   ++  ALS+  +ML  G +PD V   +L  G    ++V  A  L D+M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D   Y   ID LCK   + +A + F  +       ++  Y +L++GLC S R   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             L   +    + PNV+TYS ++     +G++ +A++LF +M   ++ P+++T+  L+ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 424 FI---RINEPSKVIELL 437
                RI+E +++ +L+
Sbjct: 305 LCLHDRIDEANQMFDLM 321



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 123/241 (51%)

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           ++N A +LF  M       ++  ++ L++   K K+ +  +SL  +M   GI+ D+   N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            +        QV  A  +  +M + G   D  T  + ++G C+   + +AV L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             + DI AYN++ID LCK+ R+  A + F+ +    + PNVVTY+ ++ GLCN  +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             L  DM +  + PNVIT+  L+  F++  +  +  EL  +M  +++ PD    S +V+ 
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 459 L 459
           L
Sbjct: 305 L 305


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  287 bits (734), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 160/453 (35%), Positives = 247/453 (54%), Gaps = 9/453 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L+    P  V F  L+  +          +L  ++  FG  P+++T   L+N  C  +
Sbjct: 51  RMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 73  HTIV--ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
              +  AL+LF++M       G    P+ VTY T+I+GLCK G    A  LL  M  KN 
Sbjct: 111 RGKIGEALHLFDKM------IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC 164

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +PNV  Y ++I   C  +   EA  LF EM+ +G+ P++ T+N ++  LC   +    + 
Sbjct: 165 QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT 224

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGY 249
           LL+ M+   + PD  ++NT++D  C  G+V  A ++   M +  GC   V SY+ LINGY
Sbjct: 225 LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGY 284

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK + I+ A+ L+ EM  + + PD V ++TL  GL  + +++ A  LF EM       + 
Sbjct: 285 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 344

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TYR  +D LCKN Y+ EA+ L   +     + DI+  N  IDG+C++G LE A +LF +
Sbjct: 345 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 404

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           L    L P+V TYSIMI GLC  G +D+A  LF +M+EN    N   ++ + RGF+R NE
Sbjct: 405 LSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNE 464

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            S+ I+LL +M       DAS +++ V +L+ +
Sbjct: 465 TSRAIQLLQEMVARGFSADASTMTLFVKMLSDD 497



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 210/441 (47%), Gaps = 46/441 (10%)

Query: 21  PDAVTFTSLIKGLCAESR--IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           P+  T   LI   C  +R  I EA  LF K+   G  PDV TY TL+NGLC+  +T  A+
Sbjct: 94  PNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAI 153

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L   M   N      C+PN   Y TIID LCK+  V +A  L  +M  K I P++ TY 
Sbjct: 154 RLLGSMVQKN------CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYN 207

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I   C   +W     L  EM+D  + P+VV+FN ++D LCK GK+ EA  ++D MIQ 
Sbjct: 208 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 267

Query: 199 G-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           G   P+  +YNTL++G+C   R++ A  LF  M          +YS LI+G C  + ++ 
Sbjct: 268 GGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 327

Query: 258 ALSLYSEMLS-----------------------------------KGIKPDVVIHNTLFV 282
           A++L+ EM++                                     + PD+ ++N    
Sbjct: 328 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 387

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
           G+    ++E A  LF  +   G+  D WTY   I+GLC+ G + EA +LF  +    C  
Sbjct: 388 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 447

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           +   YN++  G  ++     A++L + +       +  T ++ +  L +DG     + + 
Sbjct: 448 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 507

Query: 403 LDM--EENAVVPNVITFDMLI 421
            D   +++ +  NV+    +I
Sbjct: 508 RDFCKQKSWIYENVMVLQEII 528



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 185/389 (47%), Gaps = 47/389 (12%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G  S    +LG +++    P+   + ++I  LC + ++ EA  LF+++   G  PD+FT
Sbjct: 146 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 205

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV-------------------------- 94
           Y +L++ LC          L  EM +      VV                          
Sbjct: 206 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 265

Query: 95  ----CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
               C PN ++Y T+I+G CK   +DKA  L  +M  + + P+ VTY+++I G C+ +  
Sbjct: 266 QRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 325

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
            +A  LF EM+     PN+VT+ +++D LCKN  + EA  LL  +    + PD    N  
Sbjct: 326 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 385

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           +DG C  G +  A++LF ++ S G +  V++YSI+ING C+   ++ A  L+ EM   G 
Sbjct: 386 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC 445

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI-----DGL------ 319
             +  I+NT+  G    ++  RA +L  EM   G +AD  T   F+     DGL      
Sbjct: 446 TLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQ 505

Query: 320 -----CKN-GYIVEAVELFHTLRILKCEF 342
                CK   +I E V +   + ++ C F
Sbjct: 506 ILRDFCKQKSWIYENVMVLQEIILVNCNF 534



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 9/313 (2%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL---MIQHGVRPDAFTYNTLLDG 213
           F  M+     P+ V FN ++  +    KM   S LL L   M   G+ P+ +T + L++ 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINS 105

Query: 214 FCL--TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           FC    G++  A  LF  M   G +  V +Y  LING CK      A+ L   M+ K  +
Sbjct: 106 FCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ 165

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P+V  +NT+   L +  QV  AF LF EM   G++ D +TY + I  LC          L
Sbjct: 166 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 225

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLC 390
            + +   K   D+ ++N+++D LCK G++  A ++  + +  G  +PNV++Y+ +I G C
Sbjct: 226 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYC 285

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
              ++DKA  LF +M    ++P+ +T+  LI G   +      I L H+M   + +P+  
Sbjct: 286 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 345

Query: 451 IVSIVVDLLAKNE 463
              I++D L KN 
Sbjct: 346 TYRILLDYLCKNR 358



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 2/209 (0%)

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           I+GA+S ++ ML     P  V  N L   + ++        L  +M   G+  + +T   
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 315 FIDGLC--KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            I+  C    G I EA+ LF  +       D+  Y +LI+GLCK G    A+ L  S+  
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               PNV  Y+ +I  LC D Q+ +A +LF +M    + P++ T++ LI     + E   
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAK 461
           V  LL++M +  +MPD    + VVD L K
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCK 250


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 172/426 (40%), Positives = 244/426 (57%), Gaps = 7/426 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   F V+ +I+K  F  D  T T+L+KGLC + R  EA  L+      G   D   
Sbjct: 104 LGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVC 163

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  A+ L  +M  G    GV   PN + Y  ++DGLCKEG V +A  
Sbjct: 164 YGTLINGLCKMGKTRDAIELLRKMEKG----GV--RPNLIMYNMVVDGLCKEGLVTEACG 217

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM-MDQGVQPNVVTFNVIMDEL 179
           L  +M  K I  +V TY S+I GFC A  +  A RL  EM M + V+P+V TFN+++D L
Sbjct: 218 LCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDAL 277

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G + EA  +  LMI+ G+ PD  + N L++G+CL G ++ AKE+F  M   G    V
Sbjct: 278 CKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNV 337

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SYS LINGYCK K ++ AL L +EM  + + PD V +N L  GL +  +V   + L + 
Sbjct: 338 ISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEA 397

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+ +G A D  TY   +D   K   + +A+ LF  +       +IR YN LIDGLCK GR
Sbjct: 398 MRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGR 457

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A E+F+ L      PN+ TY+IMI GL  +G +D+A  L L+M ++   PN +TFD 
Sbjct: 458 MKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDP 517

Query: 420 LIRGFI 425
           L+R  +
Sbjct: 518 LVRALL 523



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 212/451 (47%), Gaps = 8/451 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVFTYTTLVNGLCRT 71
           R+L     P  V+   L+  +          +L + L   G  +P + T +  +N L   
Sbjct: 45  RMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHL 104

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
               +A ++  ++      FGV    +  T TT++ GLC +G   +A  L      K   
Sbjct: 105 GQMGLAFSVMAKIVKRG--FGV----DPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFS 158

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
            + V Y ++I G C      +A  L  +M   GV+PN++ +N+++D LCK G + EA  L
Sbjct: 159 FDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGL 218

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYC 250
              M+  G+  D FTYN+L+ GFC  G+   A  L   M      +  V++++IL++  C
Sbjct: 219 CSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALC 278

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K   +  A +++  M+ +G++PDVV  N L  G      +  A ++FD M   G   +  
Sbjct: 279 KLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVI 338

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           +Y T I+G CK   + EA+ L   +       D   YN L+DGL KSGR+    +L  ++
Sbjct: 339 SYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAM 398

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                 P+++TY++++        +DKA  LF  + +  + PN+ T+++LI G  +    
Sbjct: 399 RASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRM 458

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               E+   +      P+    +I+++ L +
Sbjct: 459 KAAKEIFQLLSVKGCRPNIRTYNIMINGLRR 489



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 208/422 (49%), Gaps = 6/422 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A + F ++      P + +   L++ + +T H    ++L   + +         +P+ V
Sbjct: 38  DAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTP-----KPSLV 92

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T +  I+ L   G +  A  ++ ++  +    +  T T++++G C      EA  L+   
Sbjct: 93  TLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHA 152

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + +G   + V +  +++ LCK GK  +A  LL  M + GVRP+   YN ++DG C  G V
Sbjct: 153 VSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLV 212

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNT 279
             A  L   M   G    VF+Y+ LI+G+C   + +GA+ L +EM+ K  ++PDV   N 
Sbjct: 213 TEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNI 272

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L ++  V  A  +F  M + G+  D  +    ++G C  G + EA E+F  +    
Sbjct: 273 LVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERG 332

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              ++ +Y++LI+G CK   ++ AL L   +    LVP+ VTY+ ++ GL   G++    
Sbjct: 333 KLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEW 392

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           DL   M  +   P++IT+++L+  +++     K + L   + +  + P+    +I++D L
Sbjct: 393 DLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGL 452

Query: 460 AK 461
            K
Sbjct: 453 CK 454



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 175/369 (47%), Gaps = 2/369 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI-KPNVVTYTSVIRGFCYAKDWNEAKR 155
           P+ V+   ++  + K         L   +  K   KP++VT +  I    +      A  
Sbjct: 53  PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +  +++ +G   +  T   +M  LC  G+  EA  L D  +  G   D   Y TL++G C
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G+   A EL   ME  G +  +  Y+++++G CK   +  A  L SEM+ KGI  DV 
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
            +N+L  G     Q + A +L +EM  +  V  D +T+   +D LCK G + EA  +F  
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL 292

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     E D+ + N+L++G C  G +  A E+F  +     +PNV++YS +I G C    
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D+A  L  +M +  +VP+ +T++ L+ G  +        +L+  M+     PD    ++
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 455 VVDLLAKNE 463
           ++D   K E
Sbjct: 413 LLDDYLKRE 421



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 179/357 (50%), Gaps = 4/357 (1%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-QP 167
           L K    D A     +M   +  P++V+   ++      K +     L   +  +G  +P
Sbjct: 30  LPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKP 89

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           ++VT ++ ++ L   G+M  A  ++  +++ G   D FT  TL+ G CL GR   A  L+
Sbjct: 90  SLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLY 149

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
               S G       Y  LING CK  +   A+ L  +M   G++P+++++N +  GL + 
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIR 345
             V  A  L  EM   G+  D +TY + I G C  G    AV L + + ++K +   D+ 
Sbjct: 210 GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEM-VMKEDVRPDVY 268

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            +N L+D LCK G +  A  +F  +    L P+VV+ + ++ G C  G M +A+++F  M
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            E   +PNVI++  LI G+ ++    + + LL +M + N++PD    + ++D L+K+
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKS 385



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 147/292 (50%), Gaps = 17/292 (5%)

Query: 6   HGFVVLGR-----------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 54
           HGF   G+           ++K    PD  TF  L+  LC    + EA  +F  +   G 
Sbjct: 239 HGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGL 298

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           EPDV +   L+NG C       A  +F+ M     E G +  PN ++Y+T+I+G CK   
Sbjct: 299 EPDVVSCNALMNGWCLRGCMSEAKEVFDRMV----ERGKL--PNVISYSTLINGYCKVKM 352

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           VD+A  LL +M  +N+ P+ VTY  ++ G   +        L   M   G  P+++T+NV
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++D+  K   +D+A  L   ++  G+ P+  TYN L+DG C  GR+  AKE+F  +   G
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKG 472

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           C+  + +Y+I+ING  +   ++ A +L  EM+  G  P+ V  + L   L E
Sbjct: 473 CRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 165/506 (32%), Positives = 266/506 (52%), Gaps = 41/506 (8%)

Query: 6   HGFVVLG------RILKSCFT----PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG++ +G      R+L+        P+  T+ SL+  LC   R  EA   F  +   G +
Sbjct: 281 HGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIK 340

Query: 56  PDVFTYTTLVNGLCRTS-----HTIVAL----------NLFEEMANGNGEFGVV------ 94
           P V TY  +++G          H ++ L          ++F    +   + G++      
Sbjct: 341 PSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDI 400

Query: 95  --------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                     P+ V+Y  +ID LCK G VD A+    QM ++ + P++V ++S++ G C 
Sbjct: 401 FNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCT 460

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W + + LF EM++ G+ PN+V FN I+  LCK G++ E  RL+D +   GVRPD  +
Sbjct: 461 VDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVIS 520

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YNTL+DG CL G ++ A +L   M S+G K   FSY+ L++GYCK   I+ A S + +ML
Sbjct: 521 YNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKML 580

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           S GI P VV +NT+  GLF+  +   A +L+  M  +G   D +TY   ++GLCK+  + 
Sbjct: 581 SNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVD 640

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA+++F  L     + +I  +N +I  L K GR E A++LF ++P   LV NVVTY +++
Sbjct: 641 EAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVV 700

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L  +G +++   LF  ME+N   PN    + L+R  +   + S+    L K+ E N  
Sbjct: 701 ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 760

Query: 447 PDASIVSIVVDLLAKNEIS--LNSLP 470
            +AS  S+++ + + +E      SLP
Sbjct: 761 VEASTTSMLISIFSSDEYQHHAKSLP 786



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 150/450 (33%), Positives = 241/450 (53%), Gaps = 4/450 (0%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVF 59
           MG + HGF   G ILK+ +  D +    L+ GLC   R+ EA   L  ++   GC PD  
Sbjct: 107 MGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTV 166

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y  L+ GLC       AL L   MA+   +    C PN V+Y+T+I+G   EG VDK  
Sbjct: 167 SYNILLKGLCNEKRAEEALELLHMMAD---DQVWSCPPNVVSYSTVINGFFTEGQVDKPY 223

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L L+M D+ I P+VVTYT+VI G C A+ ++ A+ +F +M+D GV+PN+ T+N ++   
Sbjct: 224 NLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGY 283

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
              GK  E  R+L+ M   G +P+  TY +LL+  C  GR   A+  F SM   G K +V
Sbjct: 284 LSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSV 343

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y I+++GY     +     L + M++ GI P+  I N  F    +   +++A  +F++
Sbjct: 344 TTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNK 403

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M++ G++ D  +Y   ID LCK G + +A   F+ +       DI  ++SL+ GLC   +
Sbjct: 404 MRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDK 463

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E   ELF  +    + PN+V ++ ++  LC +G++ + + L   +E   V P+VI+++ 
Sbjct: 464 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 523

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           LI G        +  +LL  M  + + PD+
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPDS 553



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 254/550 (46%), Gaps = 78/550 (14%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV  G  ++  I      PD +++ +LI G C    I EA+ L   +   G +PD F+Y
Sbjct: 497  GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSY 556

Query: 62   TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             TL++G C+      A + F +M +NG         P  VTY TI+ GL +     +AKE
Sbjct: 557  NTLLHGYCKAGRIDSAYSHFRKMLSNG-------ITPGVVTYNTILHGLFQTKRFSEAKE 609

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L L M +   K ++ TY  ++ G C +   +EA ++F  +  +G+Q N++TFN+++  L 
Sbjct: 610  LYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALL 669

Query: 181  KNGKMDEA-----------------------------------SRLLDLMIQHGVRPDAF 205
            K G+ ++A                                     L   M ++G  P++ 
Sbjct: 670  KGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 729

Query: 206  TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC--------------- 250
              N L+      G ++ A      ++         + S+LI+ +                
Sbjct: 730  MLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKY 789

Query: 251  -------------KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
                         K + I+ A SL+ EML KG+ PDVV +NT+  GLF+  +   A +L+
Sbjct: 790  RILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELY 849

Query: 298  DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
              M  +    + +TY   ++GLCK+  + EA ++F +L     + +I  +N +I  L K 
Sbjct: 850  LSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKG 909

Query: 358  GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
            GR E A++LF ++P   LVP+VVTY ++   L  +G +++   LFL ME++    +    
Sbjct: 910  GRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLL 969

Query: 418  DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS--LNSLPSFTVH 475
            + L+R  ++  + S+    L K+ E N   +AS  S ++ L ++ E      SLP     
Sbjct: 970  NALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLP----- 1024

Query: 476  EQQEEVDESN 485
            E+   ++E+N
Sbjct: 1025 EKYRLLNEAN 1034



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 221/480 (46%), Gaps = 38/480 (7%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V F +++  LC E R+ME   L   +   G  PDV +Y TL++G C       A  L
Sbjct: 481 PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL 540

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E M +      V  +P++ +Y T++ G CK G +D A     +M    I P VVTY ++
Sbjct: 541 LEGMVS------VGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTI 594

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G    K ++EAK L++ M++ G + ++ T+N+I++ LCK+  +DEA ++   +   G+
Sbjct: 595 LHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGL 654

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + +  T+N ++      GR   A +LF ++ + G    V +Y +++    +   +E   S
Sbjct: 655 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDS 714

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+S M   G  P+  + N L   L     + RA     ++     + +  T    I    
Sbjct: 715 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFS 774

Query: 321 KNGY----------------------------IVEAVELFHTLRILKCEFDIRAYNSLID 352
            + Y                            I +A  LF  + +     D+  YN+++ 
Sbjct: 775 SDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 834

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GL ++GR   A EL+ S+       N+ TY+I++ GLC    +D+A  +F  +    +  
Sbjct: 835 GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 894

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           N+ITF+++I   ++       ++L   +    ++PD     +   L+A+N I   SL  F
Sbjct: 895 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDV----VTYRLVAENLIEEGSLEEF 950



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 221/456 (48%), Gaps = 34/456 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV    V   +++    TPD V F+SL+ GLC   +  +   LF ++   G  P++  
Sbjct: 426 LGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVF 485

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T++  LC+    +    L + +       GV   P+ ++Y T+IDG C  G +D+A +
Sbjct: 486 FNTILCNLCKEGRVMEGQRLVDSIEC----MGV--RPDVISYNTLIDGHCLAGTIDEASK 539

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M    +KP+  +Y +++ G+C A   + A   F +M+  G+ P VVT+N I+  L 
Sbjct: 540 LLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLF 599

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  +  EA  L   MI  G + D +TYN +L+G C +  V+ A ++F ++ S G +  + 
Sbjct: 600 QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNII 659

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++I+I    K    E A+ L++ + + G+  +VV +  +   L E   +E    LF  M
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAM 719

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA----------------------VELF------ 332
           ++NG A ++      +  L   G I  A                      + +F      
Sbjct: 720 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQ 779

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
           H  + L  ++ I    +    + K+ R++ A  LFR +    L P+VVTY+ ++ GL   
Sbjct: 780 HHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 839

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           G+  +A++L+L M  +    N+ T+++++ G  + N
Sbjct: 840 GRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSN 875



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 159/336 (47%), Gaps = 4/336 (1%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA- 188
           + PN  TY+ +I  FC           F  ++  G + + +  N +++ LC   ++ EA 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM---ESMGCKHTVFSYSIL 245
             LL  M + G  PD  +YN LL G C   R   A EL   M   +   C   V SYS +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ING+    +++   +L+ EM+ +GI PDVV + T+  GL +    +RA  +F +M  NGV
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             +  TY   I G    G   E V +   +     + +   Y SL++ LCK+GR   A  
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
            F S+    + P+V TY IM+ G    G + +  DL   M  N + PN   F++    + 
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +     K +++ +KM++  + PDA     ++D L K
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCK 425



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 151/318 (47%), Gaps = 4/318 (1%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V PN  T+++++   C+ G ++       L+++ G R D    N LL+G C   RV  A 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 225 ELFVS-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI---KPDVVIHNTL 280
           ++ +  M  +GC     SY+IL+ G C  K  E AL L   M    +    P+VV ++T+
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G F   QV++ + LF EM   G+  D  TY T IDGLCK      A  +F  +     
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + +I  YN LI G    G+ +  + +   +  G   PN  TY  ++  LC +G+  +AR 
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            F  M    + P+V T+ +++ G+      S++ +LL+ M    + P+  I +I     A
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 461 KNEISLNSLPSFTVHEQQ 478
           K  I   ++  F    QQ
Sbjct: 390 KCGIIDKAMDIFNKMRQQ 407


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 161/464 (34%), Positives = 251/464 (54%), Gaps = 9/464 (1%)

Query: 3   RVSH---GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           R+SH   GF VLG + K    P  VTF +++ GLC E  + +A      L+  G E D +
Sbjct: 130 RLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSY 189

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           T   + NGLC+  H+  AL+  ++M   N      C  +   Y+ ++DGLCK+G V +A 
Sbjct: 190 TCGAITNGLCKVGHSSAALSYLKKMEEKN------CNLDVTAYSGVVDGLCKDGMVFEAL 243

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L  QM  K I+P++ TY  +I G C    W EA  L   MM +G+ P+V TFNVI    
Sbjct: 244 NLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRF 303

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K G +  A  +   M+  G+  D  TY +++   C+  ++  A E+F  M S GC   +
Sbjct: 304 FKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNI 363

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+G+C+ K +  A+    EM++ G+ P+VV  +TL  G+ +  +   A +LF  
Sbjct: 364 VTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLV 423

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M ++G   +  T    +DGL K  +  EA+ LF  L  +  + +I  YN ++DG+C SG+
Sbjct: 424 MHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGK 483

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  ALELF  L    +  +VVTY+IMI GLC +G +D A DL + MEEN   PN  T+++
Sbjct: 484 LNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNV 543

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            ++G +R  + SK  + L  MK+     DA+    +++  + N+
Sbjct: 544 FVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYFSANK 587



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 183/412 (44%), Gaps = 36/412 (8%)

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
           ++ +  F  V + +T +    +D +     VD A +   +M      P V  +  +    
Sbjct: 35  SHSSSTFSFVSDSDT-SRAQFLDSMRNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIV 93

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
              K +  A  L   M   GV+P V T N++++ LC+         +L LM + GV P  
Sbjct: 94  AKMKHYTTAISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSI 153

Query: 205 FTYNTLLDGFCLTGR-------VNHAKEL----------------------------FVS 229
            T+NT+++G C+ G        V+H K++                               
Sbjct: 154 VTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKK 213

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           ME   C   V +YS +++G CK+  +  AL+L+S+M  KGI+PD+  +N L  GL    +
Sbjct: 214 MEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDR 273

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            + A  L   M R G+  D  T+        K G I  A  +F  +  +  E D+  Y S
Sbjct: 274 WKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTS 333

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +I   C   +++ A+E+F  +     +PN+VTY+ +I G C    M+KA     +M  N 
Sbjct: 334 IIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNG 393

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + PNV+T+  LI G  +  +P    EL   M +   +P+    +I++D L K
Sbjct: 394 LDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFK 445



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 7/276 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+TS+I   C  +++ +A  +F  +   GC P++ TYT+L++G C T +   A+   
Sbjct: 327 DVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFL 386

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM N NG      +PN VT++T+I G+CK G    AKEL L M      PN+ T   ++
Sbjct: 387 GEMVN-NG-----LDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIIL 440

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G       +EA  LF E+       N++ +N+I+D +C +GK+++A  L   +   GV+
Sbjct: 441 DGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVK 500

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            D  TYN ++ G C  G ++ A++L + ME  GC     +Y++ + G  +  +I  +   
Sbjct: 501 IDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKY 560

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              M  KG + D        +  F  ++  RA ++F
Sbjct: 561 LMFMKDKGFQADATT-TKFLINYFSANKENRALEVF 595



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 88/221 (39%), Gaps = 35/221 (15%)

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           K ++ AL  Y +M++    P V   N LF  + ++     A  L   M   GV     T 
Sbjct: 62  KSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTL 121

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+ LC+   +  AV  F  L ++                      +I +E       
Sbjct: 122 NIVINCLCR---LSHAVFGFSVLGLM---------------------FKIGVE------- 150

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               P++VT++ ++ GLC +G + +A      +++     +  T   +  G  ++   S 
Sbjct: 151 ----PSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSA 206

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
            +  L KM+E N   D +  S VVD L K+ +   +L  F+
Sbjct: 207 ALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFS 247


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 172/495 (34%), Positives = 256/495 (51%), Gaps = 40/495 (8%)

Query: 6   HGFVVLGR----------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG+  LGR          + +    PD VTF SL+  LC   R  EAA +F  +   G +
Sbjct: 350 HGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHK 409

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVVCE---- 96
           PD+ +Y+ L++G       +   NLF  M                N + + G++ E    
Sbjct: 410 PDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLI 469

Query: 97  ----------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                     PN VTY T+I  LC+ G +  A E L QM    +KPN V Y S+I+GFC 
Sbjct: 470 FTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCT 529

Query: 147 AKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
             D  +AK L  EMMDQG+ +PN+  F+ I+  LC  G++  A  + +L+I  G RPD F
Sbjct: 530 HGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIF 589

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T+N+L+DG+CL G+++ A  +  +M S G +  V +YS LINGY K+  I+  L L+ EM
Sbjct: 590 TFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREM 649

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L K +KP  V ++ +  GLF   +   A K+F EM  +G A    TY   + GLC+N   
Sbjct: 650 LCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCT 709

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA+ LFH L  +  +F+I   N++I  L K  R E A +LF S+    LVPN  TY +M
Sbjct: 710 DEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVM 769

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I  L  +G +++A  +F  ME+    P+    + +IR  ++  E  K    + K+    +
Sbjct: 770 IINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTII 829

Query: 446 MPDASIVSIVVDLLA 460
             +AS  S+++ L A
Sbjct: 830 SLEASTTSLLISLFA 844



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/491 (31%), Positives = 252/491 (51%), Gaps = 43/491 (8%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNG 67
           ++L R+ +    PDA ++ ++IK LC  SR  EA  +  ++ +  GC PDV +YT +++G
Sbjct: 222 MLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHG 281

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           L        A NLF EM     + GVV  PN VTY +I+  LCK   +DKA+ +L QM D
Sbjct: 282 LFMEGEISKACNLFNEMV----QKGVV--PNVVTYNSIVHALCKARAMDKAELVLRQMFD 335

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
            +I+P+ VTYT++I G+     W EA ++F EM  +G+ P++VTFN +MD LCK+ +  E
Sbjct: 336 NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKE 395

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A+ +   +   G +PD  +Y+ LL G+   GR      LF SM   G       ++ILIN
Sbjct: 396 AAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILIN 455

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
            + K   ++ AL +++EM  +G+ P+VV + T+   L  + ++  A +   +M   G+  
Sbjct: 456 AHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP 515

Query: 308 DTWTYRTFIDGLCKNGYIVEAVEL--------------------FHTL----RILKCE-- 341
           +T  Y + I G C +G +++A EL                     H+L    R++  +  
Sbjct: 516 NTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDV 575

Query: 342 ----------FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
                      DI  +NSLIDG C  G+++ A  +  ++      P+VVTYS +I G   
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFK 635

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G++D    LF +M    V P  +T+ +++ G  R    S   ++ H+M E       S 
Sbjct: 636 SGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIST 695

Query: 452 VSIVVDLLAKN 462
            +I++  L +N
Sbjct: 696 YTIILQGLCRN 706



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 243/471 (51%), Gaps = 21/471 (4%)

Query: 4   VSHGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF- 52
           V HG  + G I K+C            P+ VT+ S++  LC ++R M+ A L  + ++F 
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALC-KARAMDKAELVLR-QMFD 335

Query: 53  -GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
              +PD  TYT +++G         A  +F+EM       G++  P+ VT+ +++D LCK
Sbjct: 336 NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTRE----GLI--PDIVTFNSLMDSLCK 389

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
                +A E+   +  K  KP++++Y+ ++ G+     + +   LF  M D G+  +   
Sbjct: 390 HKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHC 449

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           FN++++   K G MDEA  +   M   GV P+  TY T++   C  GR+  A E    M 
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIHNTLFVGLFEIHQV 290
           S+G K     Y  LI G+C + ++  A  L SEM+ +GI +P++   +++   L    +V
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A  +F+ +   G   D +T+ + IDG C  G + +A  +   +     E D+  Y++L
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTL 629

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I+G  KSGR++  L LFR + C  + P  VTYS+++ GL   G+   A+ +F +M E+  
Sbjct: 630 INGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGT 689

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             ++ T+ ++++G  R N   + I L HK+  +N+  + +I++ ++  L K
Sbjct: 690 AMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYK 740



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 228/459 (49%), Gaps = 10/459 (2%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           +VL ++  +   PD VT+T++I G     R  EAA +F ++   G  PD+ T+ +L++ L
Sbjct: 328 LVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSL 387

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG-FVDKAKELLLQMKD 127
           C+   +  A  +F  +A    +      P+ ++Y+ ++ G   EG FVD    L   M D
Sbjct: 388 CKHKRSKEAAEIFHSIATKGHK------PDIISYSILLHGYATEGRFVD-MNNLFHSMTD 440

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
             I  +   +  +I         +EA  +F EM  QGV PNVVT+  ++  LC+ G++ +
Sbjct: 441 NGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLAD 500

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC-KHTVFSYSILI 246
           A   L  MI  G++P+   Y++L+ GFC  G +  AKEL   M   G  +  +  +S +I
Sbjct: 501 AMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSII 560

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +  C    +  A  +++ ++  G +PD+   N+L  G   + ++++AF + D M   G  
Sbjct: 561 HSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTE 620

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D  TY T I+G  K+G I + + LF  +   + +     Y+ ++DGL ++GR   A ++
Sbjct: 621 PDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKM 680

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  +       ++ TY+I++ GLC +   D+A  LF  +    +   +   + +I    +
Sbjct: 681 FHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYK 740

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSI-VVDLLAKNEI 464
           +    +  +L   +    ++P+AS   + +++LL +  +
Sbjct: 741 VKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSV 779



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 194/393 (49%), Gaps = 5/393 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    ++   +     +P+ VT+ ++I  LC   R+ +A    +++   G +P+   Y
Sbjct: 461 GMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVY 520

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ G C     I A  L  EM +       +  PN   +++II  LC EG V  A+++
Sbjct: 521 HSLIQGFCTHGDLIKAKELVSEMMDQG-----IPRPNITFFSSIIHSLCNEGRVMNAQDV 575

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +     +P++ T+ S+I G+C     ++A  +   M+  G +P+VVT++ +++   K
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFK 635

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++D+   L   M+   V+P   TY+ +LDG    GR + AK++F  M   G   ++ +
Sbjct: 636 SGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIST 695

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I++ G C+N   + A++L+ ++ +  +K ++ I NT+   L+++ + E A  LF  + 
Sbjct: 696 YTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVS 755

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  +  TY   I  L K G + EA  +F ++    C    R  N +I  L + G + 
Sbjct: 756 ASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIV 815

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
            A      +   ++     T S++I    + G+
Sbjct: 816 KAGYYMSKVDGTIISLEASTTSLLISLFASKGR 848



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 166/331 (50%), Gaps = 2/331 (0%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA-SRL 191
            V TY  ++   C A+  +     F  ++  G++ + +  N  +  LC   + DEA S L
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSML 223

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYC 250
           L  M + G  PDAF+YNT++   C   R   A ++ + M +  GC   V SY+++I+G  
Sbjct: 224 LHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLF 283

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
              EI  A +L++EM+ KG+ P+VV +N++   L +   +++A  +  +M  N +  D  
Sbjct: 284 MEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEV 343

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY   I G    G   EA ++F  +       DI  +NSL+D LCK  R + A E+F S+
Sbjct: 344 TYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSI 403

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                 P++++YSI++ G   +G+     +LF  M +N +V +   F++LI    +    
Sbjct: 404 ATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMM 463

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            + + +  +M+   V P+    + V+  L +
Sbjct: 464 DEALLIFTEMRGQGVSPNVVTYATVIAALCR 494



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 164/329 (49%), Gaps = 7/329 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVF 59
           MGR++     L +++     P+ V + SLI+G C    +++A  L +++   G   P++ 
Sbjct: 495 MGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNIT 554

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            ++++++ LC     + A ++F      N    +   P+  T+ ++IDG C  G +DKA 
Sbjct: 555 FFSSIIHSLCNEGRVMNAQDVF------NLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAF 608

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +L  M     +P+VVTY+++I G+  +   ++   LF EM+ + V+P  VT+++++D L
Sbjct: 609 GVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGL 668

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            + G+   A ++   MI+ G      TY  +L G C     + A  LF  + +M  K  +
Sbjct: 669 FRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEI 728

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
              + +I+   K K  E A  L++ + + G+ P+   +  + + L +   VE A  +F  
Sbjct: 729 AILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSS 788

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           M++ G A  +      I  L + G IV+A
Sbjct: 789 MEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 6/312 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+   F+S+I  LC E R+M A  +F  +   G  PD+FT+ +L++G C       A  +
Sbjct: 551 PNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGV 610

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M +         EP+ VTY+T+I+G  K G +D    L  +M  K +KP  VTY+ V
Sbjct: 611 LDAMVSAG------TEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLV 664

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G   A   + AK++F EM++ G   ++ T+ +I+  LC+N   DEA  L   +    +
Sbjct: 665 LDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNL 724

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + +    NT++       R   A +LF S+ + G      +Y ++I    K   +E A  
Sbjct: 725 KFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADI 784

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++S M   G  P   + N +   L +  ++ +A     ++    ++ +  T    I    
Sbjct: 785 MFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFA 844

Query: 321 KNGYIVEAVELF 332
             G   E ++  
Sbjct: 845 SKGRYREQIKFL 856



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 154/333 (46%), Gaps = 7/333 (2%)

Query: 153 AKRLFIEMMDQGVQPNVV-----TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           A  LF  +  +   P VV     T+ ++MD  C+  + D        +++ G+R D    
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 208 NTLLDGFCLTGRVNHAKELFV-SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           NT L   C   R + A  + +  M  +GC    FSY+ +I   C     + AL +   M 
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 267 -SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
              G  PDVV +  +  GLF   ++ +A  LF+EM + GV  +  TY + +  LCK   +
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +A  +   +     + D   Y ++I G    GR + A ++F+ +    L+P++VT++ +
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           +  LC   +  +A ++F  +      P++I++ +L+ G+        +  L H M +  +
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           + D+   +I+++  AK  +   +L  FT    Q
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQ 476


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 168/515 (32%), Positives = 267/515 (51%), Gaps = 52/515 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   + +  +++     PD VT+ ++I GLC    +  A A+F ++   G +P   TY
Sbjct: 318 GQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTY 377

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG-------- 113
             L++G   T      + L EEM+  +       EP+   Y  ++D LCK G        
Sbjct: 378 NCLIHGYLSTGKWKEVVRLLEEMSTHD------LEPDCFIYALLLDYLCKNGRCTEARNI 431

Query: 114 -------------FVDKAKELLLQMKDKNIKPNVVTYTSVI------------------- 141
                         +D+A  +  +M+ + + PNVV Y ++I                   
Sbjct: 432 FDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQM 491

Query: 142 ----RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
                G C  + W +A+ L  EM+DQG++ +VV FN +M +LC+ G++ EA RL++LM++
Sbjct: 492 INEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLR 551

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            GVRPD  +YNTL+DG CLTGR + A +L   M S+G K   F+Y+ L++GYCK + I+ 
Sbjct: 552 VGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDD 611

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A SL  EML  G  PDVV +NT+  GLF+  +   A +L+  M  +    D +TY   ++
Sbjct: 612 AYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILN 671

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLCKN  + EA ++F +L     +  I  +N +I  L K G+ E A++LF ++    LVP
Sbjct: 672 GLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVP 731

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +V TY ++   L  +G +++   LF  MEEN   PN    + L+R F+   + S+    L
Sbjct: 732 DVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYL 791

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEIS--LNSLP 470
            K+ E N   +AS  S+++ L ++ E      SLP
Sbjct: 792 SKLDEKNFSLEASTASMLISLYSRGEYQQLAKSLP 826



 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 162/473 (34%), Positives = 242/473 (51%), Gaps = 48/473 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVF 59
           MGR+ HGF V G ILK+ +  + + F  L+KGLC   R+ EA   L  ++  FGC P+V 
Sbjct: 208 MGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVV 267

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y TLV G C  +    AL L   MA+  G   + C P+ V+Y T+I+G  +EG VDKA 
Sbjct: 268 SYNTLVKGFCNENRAEEALELLHVMADDQG---LSCPPDVVSYNTVINGFFREGQVDKAY 324

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L LQM D+ I P+VVTY +VI G C A+  + AK +F +M+D+GV+P+  T+N ++   
Sbjct: 325 NLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGY 384

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS---------- 229
              GK  E  RLL+ M  H + PD F Y  LLD  C  GR   A+ +F S          
Sbjct: 385 LSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDA 444

Query: 230 -----------MESMGCKHTVFSYSILINGYCKNKEIEGAL------------------- 259
                      M   G    V +Y  LI+  CK   ++ A+                   
Sbjct: 445 MIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKW 504

Query: 260 ----SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
                L  EML +GI+ DVV+ NTL   L    +V  A +L + M R GV  D  +Y T 
Sbjct: 505 EKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTL 564

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           +DG C  G   EA +L   +  +  + +   YN+L+ G CK+ R++ A  L R +     
Sbjct: 565 VDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGP 624

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            P+VVTY+ ++ GL   G+  +A++L+L+M  +    ++ T+++++ G  + N
Sbjct: 625 TPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNN 677



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 172/379 (45%), Gaps = 54/379 (14%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+  TY+ +I  FC          +F  ++  G + N + FN ++  LC   ++DEA+
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250

Query: 190 R-LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM---ESMGCKHTVFSYSIL 245
             LL  M + G  P+  +YNTL+ GFC   R   A EL   M   + + C   V SY+ +
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ING+ +  +++ A +L+ +M+ +GI PDVV +NT+  GL +   V+RA  +F +M   GV
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGV 370

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
                TY   I G    G   E V L   +     E D   Y  L+D LCK+GR   A  
Sbjct: 371 KPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARN 430

Query: 366 LFRSL------PCGV---------------LVPNVVTYSIMIGGLCNDGQMD-------- 396
           +F S+      P  +               L PNVV Y  +I  LC  G++D        
Sbjct: 431 IFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQ 490

Query: 397 ---------------KARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIELLH 438
                          KA +L  +M +  +  +V+ F+ L+       R+ E  ++IEL  
Sbjct: 491 MINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIEL-- 548

Query: 439 KMKEINVMPDASIVSIVVD 457
            M  + V PD    + +VD
Sbjct: 549 -MLRVGVRPDVISYNTLVD 566



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 152/311 (48%), Gaps = 19/311 (6%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           R+  E  D+ V P+  T+++++   C+ G+++    +  L+++ G R +   +N LL G 
Sbjct: 182 RMVRECSDK-VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGL 240

Query: 215 CLTGRVNHAKELFV-SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML-SKGIK- 271
           C   R++ A  + +  M   GC   V SY+ L+ G+C     E AL L   M   +G+  
Sbjct: 241 CDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSC 300

Query: 272 -PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            PDVV +NT+  G F   QV++A+ LF +M   G+  D  TY T IDGLCK   +  A  
Sbjct: 301 PPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKA 360

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +F  +     +     YN LI G   +G+ +  + L   +    L P+   Y++++  LC
Sbjct: 361 VFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLC 420

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            +G+  +AR++F     ++V+   I  D +I          + + +  KM++  + P+  
Sbjct: 421 KNGRCTEARNIF-----DSVIRKGIKPDAMI---------DEAVCIFDKMRQQGLSPNVV 466

Query: 451 IVSIVVDLLAK 461
               ++D L K
Sbjct: 467 NYGALIDALCK 477



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 149/296 (50%), Gaps = 27/296 (9%)

Query: 187 EASRLLDLMIQHGVRPDAFT-YNTLLDGFCLTGRVNHAKELFVSMESM-----------G 234
           +A +L DL++ H  RP + T +N LL        V+ A     ++ES             
Sbjct: 134 DALKLFDLLLPHA-RPASVTAFNHLLTA------VSRASGRHSTLESQLGISLFDRMVRE 186

Query: 235 CKHTVF----SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
           C   V     +YSILI  +C+   +E   +++  +L  G + + ++ N L  GL +  ++
Sbjct: 187 CSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRL 246

Query: 291 ERAFK-LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL---RILKCEFDIRA 346
           + A   L   M   G   +  +Y T + G C      EA+EL H +   + L C  D+ +
Sbjct: 247 DEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVS 306

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           YN++I+G  + G+++ A  LF  +    + P+VVTY+ +I GLC    +D+A+ +F  M 
Sbjct: 307 YNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQML 366

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +  V P+  T++ LI G++   +  +V+ LL +M   ++ PD  I ++++D L KN
Sbjct: 367 DKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKN 422



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 17/222 (7%)

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFV------GLFEIHQVERAFKLFDEMQR---NGVAAD 308
           AL L+  +L       V   N L        G     + +    LFD M R   + VA D
Sbjct: 135 ALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPD 194

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR--AYNSLIDGLCKSGRLEIALE- 365
             TY   I   C+ G +     +F    ILK  + +    +N L+ GLC + RL+ A   
Sbjct: 195 RCTYSILIGCFCRMGRLEHGFAVFGL--ILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN---AVVPNVITFDMLIR 422
           L   +P     PNVV+Y+ ++ G CN+ + ++A +L   M ++   +  P+V++++ +I 
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           GF R  +  K   L  +M +  + PD    + V+D L K ++
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQV 354


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 142/392 (36%), Positives = 230/392 (58%), Gaps = 6/392 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  TF  +I   C   ++  A ++  K+   G EPD  T  +LVNG CR +    A++L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           ++M     E G    P+ V Y  IID LCK   V+ A +   ++  K I+PNVVTYT+++
Sbjct: 179 DKMV----EIGY--RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALV 232

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +  WN+A RL  +M+ + + PNV+T++ ++D   KNGK+ EA  + + M++  + 
Sbjct: 233 NGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSID 292

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY++L++G CL  R++ A ++F  M S GC   V SY+ LING+CK K +E  + L
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKL 352

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +M  +G+  + V +NTL  G F++  V++A + F +M   GV+ D WTY   + GLC 
Sbjct: 353 FRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCD 412

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           NG + +A+ +F  ++  + + DI  Y ++I G+CK+G++E A  LF SL    L P++VT
Sbjct: 413 NGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVT 472

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           Y+ M+ GLC  G   +   L+  M++  ++ N
Sbjct: 473 YTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 126/356 (35%), Positives = 207/356 (58%), Gaps = 6/356 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +VS    VLG++LK  + PD VT  SL+ G C  +R+ +A +L  K+   G  PD+  Y 
Sbjct: 135 QVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYN 194

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++ LC+T     AL+ F+E+    G  G+   PN VTYT +++GLC  G  + A  LL
Sbjct: 195 AIIDSLCKTRRVNDALDFFKEI----GRKGI--RPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  + I PNV+TY++++  F       EAK +F EM+   + P++VT++ +++ LC +
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DEA+++ DLM+  G  PD  +YNTL++GFC   RV    +LF  M   G  +   +Y
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI G+ +  +++ A   +S+M S G+ PD+  +N L  GL +   +E+A  +F++MQ+
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQK 428

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           + +  D  TY T I G+CK G + +A  LF +L +   + DI  Y +++ GLC  G
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 185/348 (53%), Gaps = 6/348 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A+NLF EM      F     P+ V +  ++  + K    D    L  +M+   I+ ++ T
Sbjct: 69  AINLFREMVKTR-PF-----PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           +  VI  FC     + A  +  +M+  G +P+ VT   +++  C+  ++ +A  L+D M+
Sbjct: 123 FNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G RPD   YN ++D  C T RVN A + F  +   G +  V +Y+ L+NG C +    
Sbjct: 183 EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWN 242

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L  +M+ + I P+V+ ++ L     +  +V  A ++F+EM R  +  D  TY + I
Sbjct: 243 DAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLC +  I EA ++F  +    C  D+ +YN+LI+G CK+ R+E  ++LFR +    LV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            N VTY+ +I G    G +DKA++ F  M+   V P++ T+++L+ G 
Sbjct: 363 NNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGL 410



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 180/348 (51%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P++V +  ++      K ++    L  +M   G++ ++ TFN++++  C   ++  A  +
Sbjct: 83  PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  M++ G  PD  T  +L++GFC   RV+ A  L   M  +G +  + +Y+ +I+  CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            + +  AL  + E+  KGI+P+VV +  L  GL    +   A +L  +M +  +  +  T
Sbjct: 203 TRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   +D   KNG ++EA E+F  +  +  + DI  Y+SLI+GLC   R++ A ++F  + 
Sbjct: 263 YSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                P+VV+Y+ +I G C   +++    LF  M +  +V N +T++ LI+GF ++ +  
Sbjct: 323 SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVD 382

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           K  E   +M    V PD    +I++  L  N +   +L  F   ++ E
Sbjct: 383 KAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSE 430



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 147/269 (54%), Gaps = 6/269 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR +    +L  ++K   TP+ +T+++L+       +++EA  +F ++     +PD+ TY
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY 298

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L+NGLC       A  +F+ M +        C P+ V+Y T+I+G CK   V+   +L
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKG------CFPDVVSYNTLINGFCKAKRVEDGMKL 352

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  N VTY ++I+GF    D ++A+  F +M   GV P++ T+N+++  LC 
Sbjct: 353 FRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCD 412

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG +++A  + + M +  +  D  TY T++ G C TG+V  A  LF S+   G K  + +
Sbjct: 413 NGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVT 472

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGI 270
           Y+ +++G C         +LY++M  +G+
Sbjct: 473 YTTMMSGLCTKGLQHEVEALYTKMKQEGL 501



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 152/292 (52%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           ++A  LF EM+     P++V FN ++  + K  K D    L   M   G+R D +T+N +
Sbjct: 67  HDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ FC   +V+ A  +   M  +G +    +   L+NG+C+   +  A+SL  +M+  G 
Sbjct: 127 INCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +PD+V +N +   L +  +V  A   F E+ R G+  +  TY   ++GLC +G   +A  
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR 246

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +   K   ++  Y++L+D   K+G++  A E+F  +    + P++VTYS +I GLC
Sbjct: 247 LLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLC 306

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
              ++D+A  +F  M      P+V++++ LI GF +       ++L  KM +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 142/274 (51%), Gaps = 12/274 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +   +++    PD VT++SLI GLC   RI EA  +F  +   GC PDV +Y
Sbjct: 274 GKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSY 333

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG C+       + LF +M+    + G+V   NTVTY T+I G  + G VDKA+E 
Sbjct: 334 NTLINGFCKAKRVEDGMKLFRKMS----QRGLV--NNTVTYNTLIQGFFQVGDVDKAQEF 387

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM    + P++ TY  ++ G C      +A  +F +M    +  ++VT+  ++  +CK
Sbjct: 388 FSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCK 447

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+++A  L   +   G++PD  TY T++ G C  G  +  + L+  M+  G      +
Sbjct: 448 TGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMK---N 504

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            S+L  G   + +I  +  L  +MLS G  P ++
Sbjct: 505 DSMLCLG---DGDITISAELIKKMLSCGYAPSLL 535



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 133/257 (51%), Gaps = 3/257 (1%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ +A  L   M++    P    +N LL       + +    L   ME +G ++ +++++
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I+IN +C   ++  ALS+  +ML  G +PD V   +L  G    ++V  A  L D+M   
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D   Y   ID LCK   + +A++ F  +       ++  Y +L++GLC SGR   A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             L R +    + PNV+TYS ++     +G++ +A+++F +M   ++ P+++T+  LI G
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 424 FI---RINEPSKVIELL 437
                RI+E +++ +L+
Sbjct: 305 LCLHDRIDEANQMFDLM 321


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 157/446 (35%), Positives = 242/446 (54%), Gaps = 41/446 (9%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V  GF VLG+I K  F P  +TF +LI GLC E RI+EA      +   G +P V+T+T 
Sbjct: 155 VGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTM 214

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           +VNGLC+   T  A+   ++M   +      CEP  V+Y+ IID LCK   V++A +L  
Sbjct: 215 IVNGLCKIGKTSAAIVWMKKMVELD------CEPEVVSYSIIIDSLCKNRLVNEAVDLFY 268

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN- 182
            M+   I P VVTY S+I G C +  W +A  LF EM++  ++P+VVTF++++D LCK  
Sbjct: 269 HMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEG 328

Query: 183 ---------GKM-------------------------DEASRLLDLMIQHGVRPDAFTYN 208
                    GKM                          E+S LL+ M+   +RPD  T++
Sbjct: 329 VVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFS 388

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
             +D FC  G V+ A+ +   M   G +  V +Y+ L++GYC + +++ A  ++  M++K
Sbjct: 389 IWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNK 448

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  PDV+ +N L  G  +  +++ A +LFDEM   G+  ++ T+ T I GLC+ G    A
Sbjct: 449 GCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAA 508

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            ELF  +    C  D+  Y++L+ G CK G L+ AL LF +L    L PN V   I++GG
Sbjct: 509 KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGG 568

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNV 414
           +C  G+++ A++LF  +    + P+V
Sbjct: 569 MCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 139/379 (36%), Positives = 227/379 (59%), Gaps = 6/379 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+ S   V + ++++    P+ V+++ +I  LC    + EA  LF  +R  G  P V T
Sbjct: 222 IGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVT 281

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+ G+C +     A  LF+EM   N       +P+ VT++ ++D LCKEG V +A  
Sbjct: 282 YNSLIYGMCNSGQWKQASILFKEMLEWN------MKPDVVTFSILVDALCKEGVVLEALS 335

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M    ++P++VTY+S+I G C +  W E+  L  EM+ + ++P+VVTF++ +D  C
Sbjct: 336 VFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFC 395

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + EA  +++LMI+ G+RP+  TYN+L+DG+CL  +++ A+++F  M + GC   V 
Sbjct: 396 KKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVL 455

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILI GYCK++ I+ A  L+ EM  KG+ P+ + H TL  GL +  +   A +LF +M
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G   D  TY T + G CK+G++ EA+ LF  L+  + + +      L+ G+CK+G+L
Sbjct: 516 GSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKL 575

Query: 361 EIALELFRSLPCGVLVPNV 379
           E A ELF SL    L P+V
Sbjct: 576 EDAKELFSSLSIEELQPDV 594



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 241/462 (52%), Gaps = 13/462 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE- 83
           T T LI  LC    +    ++  K+   G +P + T+ TL+NGLC     + A+   +  
Sbjct: 141 TLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYI 200

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M+ G        +P   T+T I++GLCK G    A   + +M + + +P VV+Y+ +I  
Sbjct: 201 MSRGY-------QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDS 253

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C  +  NEA  LF  M   G+ P VVT+N ++  +C +G+  +AS L   M++  ++PD
Sbjct: 254 LCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPD 313

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             T++ L+D  C  G V  A  +F  M  +  +  + +YS LI+G CK+   + + +L +
Sbjct: 314 VVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLN 373

Query: 264 EMLSKGIKPDVVIHNTLFVGLF-EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           EMLS+ I+PDVV   +++V +F +   V  A  + + M   G+  +  TY + +DG C +
Sbjct: 374 EMLSRNIRPDVVTF-SIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLH 432

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
             + EA ++F  +    C  D+ +YN LI G CKS R++ A +LF  +    L PN +T+
Sbjct: 433 SQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITH 492

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + +I GLC  G+   A++LF  M  +   P++IT+  L+ GF +     + + L   +K+
Sbjct: 493 TTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKK 552

Query: 443 INVMPDASIVSIVVDLLAKN---EISLNSLPSFTVHEQQEEV 481
             + P+  I  I++  + K    E +     S ++ E Q +V
Sbjct: 553 SQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 221/442 (50%), Gaps = 6/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    F  L+  L          +++ K+  FG    V+T T L+N LC      +  ++
Sbjct: 102 PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSV 161

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             ++      F +  +P+ +T+ T+I+GLC EG + +A E L  +  +  +P V T+T +
Sbjct: 162 LGKI------FKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMI 215

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C     + A     +M++   +P VV++++I+D LCKN  ++EA  L   M   G+
Sbjct: 216 VNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGI 275

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P   TYN+L+ G C +G+   A  LF  M     K  V ++SIL++  CK   +  ALS
Sbjct: 276 SPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALS 335

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ +M+   ++PD+V +++L  G+ +    + +  L +EM    +  D  T+  ++D  C
Sbjct: 336 VFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFC 395

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + EA  + + +       ++  YNSL+DG C   +++ A ++F  +      P+V+
Sbjct: 396 KKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVL 455

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y+I+I G C   ++D+A+ LF +M    + PN IT   LI G  +   P    EL  KM
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
                 PD    S ++    K+
Sbjct: 516 GSHGCPPDLITYSTLLSGFCKH 537



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 200/409 (48%), Gaps = 6/409 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A A F ++      P +  +  L+  L R  H    ++++ +M      FGV C  +  
Sbjct: 87  DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEF----FGVSC--SVY 140

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T T +I+ LC    V     +L ++     KP+++T+ ++I G C      EA      +
Sbjct: 141 TLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYI 200

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           M +G QP V T  +I++ LCK GK   A   +  M++    P+  +Y+ ++D  C    V
Sbjct: 201 MSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLV 260

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A +LF  M S+G   TV +Y+ LI G C + + + A  L+ EML   +KPDVV  + L
Sbjct: 261 NEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSIL 320

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +   V  A  +F +M +  +  D  TY + I G+CK+    E+  L + +     
Sbjct: 321 VDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNI 380

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  ++  +D  CK G +  A  +   +    L PNVVTY+ ++ G C   QMD+AR 
Sbjct: 381 RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARK 440

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           +F  M      P+V+++++LI+G+ +     +  +L  +M    + P++
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNS 489



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 195/390 (50%), Gaps = 12/390 (3%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           AL  F +M + N        P    +  ++  L +    D    +  +M+   +  +V T
Sbjct: 88  ALAYFNQMVHMNPF------PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYT 141

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
            T +I   C+         +  ++   G +P+++TFN +++ LC  G++ EA   LD ++
Sbjct: 142 LTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIM 201

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G +P  +T+  +++G C  G+ + A      M  + C+  V SYSI+I+  CKN+ + 
Sbjct: 202 SRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVN 261

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+ L+  M S GI P VV +N+L  G+    Q ++A  LF EM    +  D  T+   +
Sbjct: 262 EAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILV 321

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D LCK G ++EA+ +F  +  +  E DI  Y+SLI G+CKS   + +  L   +    + 
Sbjct: 322 DALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIR 381

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKV 433
           P+VVT+SI +   C  G + +A+ +   M E  + PNV+T++ L+ G+    +++E  KV
Sbjct: 382 PDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKV 441

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            ++   M      PD    +I++    K+E
Sbjct: 442 FDI---MVNKGCAPDVLSYNILIKGYCKSE 468


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/404 (38%), Positives = 227/404 (56%), Gaps = 6/404 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
             ++  F V   ILK  F P+A+T  +LIKGLC    I +A     +L   G + D  +Y
Sbjct: 106 AHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSY 165

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NGLC+T  T     L  ++       G   +P+ V Y TII+ LCK   +  A ++
Sbjct: 166 GTLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIINSLCKNKLLGDACDV 219

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K I P+VVTYT++I GFC      EA  L  EM  + + PNV TFN+++D L K
Sbjct: 220 YSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK 279

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GKM EA  LL +M++  ++PD FTYN+L+DG+ L   V HAK +F SM   G    V  
Sbjct: 280 EGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQC 339

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +ING CK K ++ A+SL+ EM  K + PD+V +N+L  GL + H +ERA  L   M+
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMK 399

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D ++Y   +DGLCK+G + +A E+F  L       ++ AY  LI+ LCK+G  +
Sbjct: 400 EQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFD 459

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            AL+L   +     +P+ VT+ I+I  L    + DKA  +  +M
Sbjct: 460 EALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/421 (33%), Positives = 223/421 (52%), Gaps = 6/421 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TPD  T + LI   C ++ I  A ++F  +   G  P+  T  TL+ GLC       AL 
Sbjct: 89  TPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALY 148

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
             +++     +       + V+Y T+I+GLCK G       LL +++  ++KP+VV Y +
Sbjct: 149 FHDQLVAQGFQL------DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 202

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C  K   +A  ++ EM+ +G+ P+VVT+  ++   C  G + EA  LL+ M    
Sbjct: 203 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN 262

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+  T+N L+D     G++  AK L   M     K  VF+Y+ LI+GY    E++ A 
Sbjct: 263 INPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAK 322

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++  M  +G+ PDV  +  +  GL +   V+ A  LF+EM+   +  D  TY + IDGL
Sbjct: 323 YVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGL 382

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CKN ++  A+ L   ++    + D+ +Y  L+DGLCKSGRLE A E+F+ L       NV
Sbjct: 383 CKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNV 442

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             Y+++I  LC  G  D+A DL   ME+   +P+ +TFD++IR     +E  K  ++L +
Sbjct: 443 HAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILRE 502

Query: 440 M 440
           M
Sbjct: 503 M 503



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 221/439 (50%), Gaps = 6/439 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    F +++  L          +LF +    G  PD+ T + L+N  C  +H  +A ++
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  +            PN +T  T+I GLC  G + KA     Q+  +  + + V+Y ++
Sbjct: 115 FANILKRGFH------PNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTL 168

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C   +     RL  ++    V+P+VV +N I++ LCKN  + +A  +   MI  G+
Sbjct: 169 INGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGI 228

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY TL+ GFC+ G +  A  L   M+       V +++ILI+   K  +++ A  
Sbjct: 229 SPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKI 288

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L + M+   IKPDV  +N+L  G F + +V+ A  +F  M + GV  D   Y   I+GLC
Sbjct: 289 LLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLC 348

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + EA+ LF  ++      DI  YNSLIDGLCK+  LE A+ L + +    + P+V 
Sbjct: 349 KTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVY 408

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y+I++ GLC  G+++ A+++F  +       NV  + +LI    +     + ++L  KM
Sbjct: 409 SYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKM 468

Query: 441 KEINVMPDASIVSIVVDLL 459
           ++   MPDA    I++  L
Sbjct: 469 EDKGCMPDAVTFDIIIRAL 487



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 161/320 (50%), Gaps = 41/320 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V + ++I  LC    + +A  +++++ V G  PDV TYTTL++G C   H   A +L
Sbjct: 195 PDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSL 254

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM   N        PN  T+  +ID L KEG + +AK LL  M    IKP+V TY S+
Sbjct: 255 LNEMKLKN------INPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSL 308

Query: 141 IRGF-----------------------------------CYAKDWNEAKRLFIEMMDQGV 165
           I G+                                   C  K  +EA  LF EM  + +
Sbjct: 309 IDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNM 368

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            P++VT+N ++D LCKN  ++ A  L   M + G++PD ++Y  LLDG C +GR+  AKE
Sbjct: 369 IPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKE 428

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F  + + G    V +Y++LIN  CK    + AL L S+M  KG  PD V  + +   LF
Sbjct: 429 IFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALF 488

Query: 286 EIHQVERAFKLFDEMQRNGV 305
           E  + ++A K+  EM   G+
Sbjct: 489 EKDENDKAEKILREMIARGL 508



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 137/270 (50%), Gaps = 6/270 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +   F +L  +      P+  TF  LI  L  E ++ EA  L   +     +PDVFT
Sbjct: 245 MGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFT 304

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G         A  +F  MA    + GV   P+   YT +I+GLCK   VD+A  
Sbjct: 305 YNSLIDGYFLVDEVKHAKYVFYSMA----QRGVT--PDVQCYTNMINGLCKTKMVDEAMS 358

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +MK KN+ P++VTY S+I G C       A  L   M +QG+QP+V ++ +++D LC
Sbjct: 359 LFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLC 418

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G++++A  +   ++  G   +   Y  L++  C  G  + A +L   ME  GC     
Sbjct: 419 KSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAV 478

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ I+I    +  E + A  +  EM+++G+
Sbjct: 479 TFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 144/298 (48%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P    FN I+  L  N        L      +G+ PD  T + L++ FC    +  A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           F ++   G      + + LI G C   EI+ AL  + +++++G + D V + TL  GL +
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
             + +   +L  +++ + V  D   Y T I+ LCKN  + +A +++  + +     D+  
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y +LI G C  G L+ A  L   +    + PNV T++I+I  L  +G+M +A+ L   M 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           +  + P+V T++ LI G+  ++E      + + M +  V PD    + +++ L K ++
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKM 352



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 126/266 (47%)

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            +LM+     P  F +N +L              LF   E  G    + + SILIN +C 
Sbjct: 45  FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              I  A S+++ +L +G  P+ +  NTL  GL    ++++A    D++   G   D  +
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I+GLCK G       L   L     + D+  YN++I+ LCK+  L  A +++  + 
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+VVTY+ +I G C  G + +A  L  +M+   + PNV TF++LI    +  +  
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284

Query: 432 KVIELLHKMKEINVMPDASIVSIVVD 457
           +   LL  M +  + PD    + ++D
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLID 310


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  285 bits (729), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 166/492 (33%), Positives = 262/492 (53%), Gaps = 43/492 (8%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           GF V+G +LK  FT +      ++KGLC    + EA  L  ++      PD+ +Y TL+N
Sbjct: 128 GFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLIN 187

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GLC+      A+ L  EM          C PN+VT TT++DGLCK+G +D+A ELL  MK
Sbjct: 188 GLCKAKKLKEAVGLLLEMEAAG------CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 241

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            K    +VV Y ++I GFC   + +  K LF EM+ +G+  NVVT++ ++  LC+ G+  
Sbjct: 242 KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 301

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA+ +L+ M +HG+ PD  TY  L+DG C  GR  HA +L   M   G + +  +Y++L+
Sbjct: 302 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 361

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM--QRNG 304
           +G CK   +  A  +   M+ KG K DVV +NTL  GL +  +V+ A KLF+ M    N 
Sbjct: 362 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 421

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  + +T+   I GLCK G + +AV++   +       ++  YN L+ G  K+G+++ A+
Sbjct: 422 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGG-----------------------------------L 389
           EL++ +     VPN  TYSI+I G                                   L
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 541

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C +G +++A+ LF +M      P++I+F+ +I G ++  +   V EL  KM E+ + PDA
Sbjct: 542 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 601

Query: 450 SIVSIVVDLLAK 461
              S +++ L+K
Sbjct: 602 LTFSTLINRLSK 613



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 249/476 (52%), Gaps = 11/476 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  + K  F  D V + +LI G C    +     LF ++   G   +V TY
Sbjct: 228 GRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTY 287

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + LV+GLCR      A  +   MA    E G+   P+ VTYT +IDGLCK+G    A +L
Sbjct: 288 SCLVHGLCRLGQWKEANTVLNAMA----EHGI--HPDVVTYTGLIDGLCKDGRATHAMDL 341

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +K  +P+ VTY  ++ G C      +A ++   M+++G + +VVT+N +M  LC 
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401

Query: 182 NGKMDEASRLLDLMI--QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            GK+DEA +L + M   ++ + P+ FT+N L+ G C  GR+  A ++   M   G    +
Sbjct: 402 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 461

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y++L+ G  K  +I+ A+ L+ ++L  G  P+   ++ L  G  ++  +  A  LF E
Sbjct: 462 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 521

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+ +G+    + Y T +  LCK G + +A  LF  +    CE DI ++N++IDG  K+G 
Sbjct: 522 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 581

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            +   EL   +    L P+ +T+S +I  L   G++D+A+     M  +   P+ + +D 
Sbjct: 582 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 641

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN--EIS-LNSLPSF 472
           L++G     + +++I LLH+M     + D  IVS ++  L  +  E+  +  LP+F
Sbjct: 642 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTF 697



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 238/465 (51%), Gaps = 33/465 (7%)

Query: 30  IKGLCAE--SRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN- 86
           ++ LC +  S+  EA +LF     F   P   T   LV+ L R+ +  +A +++  M + 
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 87  ------------------------GNGEFGVVCEP----NTVTYTTIIDGLCKEGFVDKA 118
                                   G G  G+V +     N      ++ GLC+ G V +A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             L+ +M  K++ P++V+Y ++I G C AK   EA  L +EM   G  PN VT   +MD 
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK+G+MDEA  LL+ M + G   D   Y TL+ GFC  G ++  KELF  M   G    
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +YS L++G C+  + + A ++ + M   GI PDVV +  L  GL +  +   A  L +
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M   G      TY   + GLCK G +++A ++   +     + D+  YN+L+ GLC  G
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 403

Query: 359 RLEIALELFRSL--PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +++ AL+LF S+      L PNV T++++IGGLC +G++ KA  +   M +     N++T
Sbjct: 404 KVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVT 463

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++ML+ G ++  +  + +EL  ++ ++  +P++   SI++D   K
Sbjct: 464 YNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 508



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 189/396 (47%), Gaps = 8/396 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      VL  + +    PD VT+T LI GLC + R   A  L   +   G EP   T
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++GLC+    I A  +   M           + + VTY T++ GLC +G VD+A +
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGK------KADVVTYNTLMKGLCDKGKVDEALK 410

Query: 121 LLLQMKDKN--IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           L   M D    ++PNV T+  +I G C      +A ++  +M+ +G   N+VT+N+++  
Sbjct: 411 LFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 470

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
             K GK+ EA  L   ++  G  P++FTY+ L+DGFC    +N AK LF  M + G    
Sbjct: 471 CLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPA 530

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           +F Y+ L+   CK   +E A SL+ EM +   +PD++  NT+  G  +    +   +L  
Sbjct: 531 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 590

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M   G+  D  T+ T I+ L K G + EA      +       D   Y+SL+ GL   G
Sbjct: 591 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKG 650

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                + L   +     V +    S ++  LC+  Q
Sbjct: 651 DTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQ 686



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 162/330 (49%), Gaps = 2/330 (0%)

Query: 141 IRGFCYAKD--WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +R  C   +  + EA  LF   +D  + P+  T N ++D L ++     A  +   M   
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            V P   + + L++ F    +      +   +   G    VF  +I++ G C+N  +  A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           + L  EM  K + PD+V +NTL  GL +  +++ A  L  EM+  G   ++ T  T +DG
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK+G + EA+EL   ++    + D+  Y +LI G C +G L+   ELF  +    +  N
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVTYS ++ GLC  GQ  +A  +   M E+ + P+V+T+  LI G  +    +  ++LL+
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNS 468
            M E    P     ++++  L K  + +++
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDA 373



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 29/239 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +  ++L   F P++ T++ LI G C    +  A  LF ++R  G  P +F Y
Sbjct: 475 GKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 534

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGN------------------GEFGVVCE------- 96
            TL+  LC+      A +LF+EM N N                  G+F  V E       
Sbjct: 535 NTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 594

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P+ +T++T+I+ L K G +D+AK  L +M      P+ + Y S+++G     D  E
Sbjct: 595 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTE 654

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
              L  +M  +G   +    + I+  LC + +  +   LL    Q      + + N LL
Sbjct: 655 IINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 713



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 41/90 (45%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +      L R++ S FTPDA+ + SL+KGL ++    E   L  ++   G   D   
Sbjct: 614 LGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKI 673

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGE 90
            +T++  LC +   +  + L      G  E
Sbjct: 674 VSTILTCLCHSIQEVDVMELLPTFFQGTSE 703


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 155/492 (31%), Positives = 264/492 (53%), Gaps = 31/492 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L ++      PD VT++ LI   C   R  EA  +F  +   G  PD +TY
Sbjct: 204 GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTY 263

Query: 62  TTLVNGLCRTS-----HTIVALNLFEEMANGNGEFGVVCE-------------------- 96
            TL++G          H ++AL + + +   +  F ++                      
Sbjct: 264 RTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQ 323

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN VTYTT+ID LCK G V+ A     QM  + + P+++T+TS+I G C   +W +
Sbjct: 324 KGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKK 383

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
            ++L  EM+++G+ PN +  N IMD LCK G++ EA    D +I  GV+PD  +Y  L+D
Sbjct: 384 VEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILID 443

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+CL G+++ + +L   M S+G +    +YS L+NGYCKN  ++ AL+LY EM SK +KP
Sbjct: 444 GYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKP 503

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           + + +N +  GLF   +V  A + + ++  +G+     TY   + GLC+N ++ EA+ +F
Sbjct: 504 NAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMF 563

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCN 391
             LR  + + ++R +N +I GL K GR+  A  LF + LP G LVP+ + Y +MI     
Sbjct: 564 QGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSG-LVPDAIIYGLMIQSHIE 622

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G ++++ +LFL ME+N    N  T + ++R  +   +  +    L K+ E     +AS 
Sbjct: 623 EGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEAST 682

Query: 452 VSIVVDLLAKNE 463
             +++ ++++ +
Sbjct: 683 AVLLISIVSERK 694



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 234/492 (47%), Gaps = 64/492 (13%)

Query: 42  AAALFTKLRVFGCEP---DVFTYTTLVNGLCRTSHTIVALNLFEEMANGN-------GEF 91
           A +LF  +   G      D  T+  L+   C       AL   EE + G+        + 
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFAL---EEESRGSRAAVHMMADD 131

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
           G  C PN ++Y  +I+GL KEG VDKA  L  +M  +   PN+VTY SVI G C A+  +
Sbjct: 132 GYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMD 191

Query: 152 EAKRLFIEMMDQG----------------VQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +A+ +  +M D+G                +QP+VVT+++++D  CK G+  EA  + D M
Sbjct: 192 KAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSM 251

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRV----------------------------------- 220
           ++ G  PDA+TY TLL G+   G +                                   
Sbjct: 252 VRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETL 311

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A   F+ M   G    V +Y+ +I+  CK   +E A+S +S+M+S+G+ PD++   +L
Sbjct: 312 DKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSL 371

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL  I + ++  KL  EM   G+  +     T +D LCK G ++EA + F  +  +  
Sbjct: 372 IHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGV 431

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D+ +Y  LIDG C  G+++ +++L   +    L P+ VTYS ++ G C +G++D A  
Sbjct: 432 KPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALA 491

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L+ +M    V PN IT+++++ G           E   K+ +  +    +  +IV+  L 
Sbjct: 492 LYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLC 551

Query: 461 KNEISLNSLPSF 472
           +N     +L  F
Sbjct: 552 ENSFVDEALRMF 563



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 16/187 (8%)

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS---------- 357
           +  +Y   I+GL K G + +A  LFH +       +I  YNS+IDGLCK+          
Sbjct: 138 NVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVL 197

Query: 358 ------GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
                 G+LE A+ L + +  G L P+VVTYS++I   C  G+  +AR++F  M      
Sbjct: 198 QQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQN 257

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
           P+  T+  L+ G+        + +LL  M +  +  +  + +I++   AKNE    ++ +
Sbjct: 258 PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTA 317

Query: 472 FTVHEQQ 478
           F    Q+
Sbjct: 318 FIEMRQK 324


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  285 bits (728), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 163/482 (33%), Positives = 256/482 (53%), Gaps = 33/482 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T+  L+  LC   R  EA   F  +   G +PDV  Y  L++G   T   +  ++ 
Sbjct: 264 PDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYA-TKGALSEMHS 322

Query: 81  FEEMANGNGE------FGVV------------------------CEPNTVTYTTIIDGLC 110
           F ++  GNG       F ++                          P+ V++  +ID LC
Sbjct: 323 FLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALC 382

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G VD A     QM ++ + PN+  ++S++ G C    W +A+ LF E++DQG+  + V
Sbjct: 383 KLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAV 442

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN +M  LC  G++ EA RL+DLMI+ GVRP+  +YNTL+ G CLTGR++ A +L   M
Sbjct: 443 FFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVM 502

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S G K   F+Y+IL+ GYCK + ++ A SL+ EML KG+ P V  +NT+  GLF+  + 
Sbjct: 503 VSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRF 562

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L+  M  +    D +TY   ++GLCKN ++ EA ++F  L     + D   +N +
Sbjct: 563 SEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIM 622

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I  L K GR E A++LF ++    LVP+VVTY ++   L  +G + +   LF  ME++  
Sbjct: 623 IGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGT 682

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS--LNS 468
            PN    + L+R  +   + S+    L+K+ E N   +AS  S+++ L ++ E      S
Sbjct: 683 APNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKS 742

Query: 469 LP 470
           LP
Sbjct: 743 LP 744



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 247/498 (49%), Gaps = 42/498 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVF 59
           MGR+ HGF   G ILK+ +  + +  + L+KGLC   R+ EA   L  ++  FGC PDV 
Sbjct: 103 MGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVV 162

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            Y T++NG  R      A NLF EM +          PN VTYTT+IDGLCK   VD+AK
Sbjct: 163 AYNTVINGFFREGQVEKAYNLFLEMMDQG------IPPNVVTYTTVIDGLCKAQVVDRAK 216

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  QM D+ +KP+  TY  +I G+     W E  ++  EM   G++P+ +T+ +++D L
Sbjct: 217 GVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYL 276

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR-------------------- 219
           CKNG+  EA    D M + G++PD   Y  LL G+   G                     
Sbjct: 277 CKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNR 336

Query: 220 ---------------VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
                          +  A  +F  M   G    V S+  LI+  CK   ++ A+  +++
Sbjct: 337 RIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQ 396

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+++G+ P++ + ++L  GL  + + E+A +LF E+   G+  D   + T +  LC  G 
Sbjct: 397 MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGR 456

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           ++EA  L   +  +    ++ +YN+L+ G C +GR++ A +L   +    L PN  TY+I
Sbjct: 457 VMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTI 516

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           ++ G C   ++D A  LF +M    V P V T++ ++ G  +    S+  EL   M    
Sbjct: 517 LLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR 576

Query: 445 VMPDASIVSIVVDLLAKN 462
              D    +I+++ L KN
Sbjct: 577 TKCDIYTYNIILNGLCKN 594



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 201/401 (50%), Gaps = 21/401 (5%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP----NTVTYTTIIDGLCK 111
           P+  TY+ L+   CR             + +G   FG++ +     N +  + ++ GLC 
Sbjct: 88  PNACTYSILIGCFCRMGR----------LEHGFAAFGLILKTGWRVNVIVISQLLKGLCD 137

Query: 112 EGFVDKAKE-LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
              VD+A + LLL+M +    P+VV Y +VI GF       +A  LF+EMMDQG+ PNVV
Sbjct: 138 AKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVV 197

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T+  ++D LCK   +D A  +   MI  GV+PD  TYN L+ G+  TG+     ++   M
Sbjct: 198 TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            + G +    +Y++L++  CKN     A   +  M  KGIKPDV I+  L  G      +
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
                  D M  NGV+ +   +        K   I EA+ +F+ +R      D+ ++ +L
Sbjct: 318 SEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGAL 377

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ID LCK GR++ A+  F  +    + PN+  +S ++ GLC  G+ +KA +LF ++ +  +
Sbjct: 378 IDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGI 437

Query: 411 VPNVITFDMLIRGFI---RINEPSKVIELLHKMKEINVMPD 448
             + + F+ L+       R+ E  ++I+L   M  + V P+
Sbjct: 438 CVDAVFFNTLMCNLCNEGRVMEAQRLIDL---MIRVGVRPN 475



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 160/335 (47%), Gaps = 7/335 (2%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG------VRPDA 204
           +EA +LF E++      +V  FN ++  + + G    + R++ L  +        V P+A
Sbjct: 31  DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY+ L+  FC  GR+ H    F  +   G +  V   S L+ G C  K ++ A  +   
Sbjct: 91  CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150

Query: 265 MLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            +S+ G  PDVV +NT+  G F   QVE+A+ LF EM   G+  +  TY T IDGLCK  
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            +  A  +F  +     + D   YN LI G   +G+ +  +++   +    L P+ +TY+
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           +++  LC +G+  +AR  F  M    + P+V  + +L+ G+      S++   L  M   
Sbjct: 271 LLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN 330

Query: 444 NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
            V P+  I +I+    AK  +   ++  F    QQ
Sbjct: 331 GVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQ 365



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 6/317 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           DAV F +L+  LC E R+MEA  L   +   G  P+V +Y TLV G C T     A  L 
Sbjct: 440 DAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLL 499

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + M + NG      +PN  TYT ++ G CK   VD A  L  +M  K + P V TY +++
Sbjct: 500 DVMVS-NG-----LKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G      ++EA  L++ M++   + ++ T+N+I++ LCKN  +DEA ++   +     +
Sbjct: 554 HGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQ 613

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            D+ T+N ++      GR   A +LF ++ + G    V +Y ++     +   +     L
Sbjct: 614 LDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGL 673

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +S M   G  P+  + N L   L     + RA     ++     + +  T    I    +
Sbjct: 674 FSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSR 733

Query: 322 NGYIVEAVELFHTLRIL 338
             Y   A  L    R L
Sbjct: 734 GEYQPHAKSLPEKYRFL 750


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 163/452 (36%), Positives = 246/452 (54%), Gaps = 10/452 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVF 59
           MGR+ HGF   G ILKS +  + +    L+KGLC   R+ EA   L  ++   GC PDV 
Sbjct: 107 MGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVV 166

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y TL+ G C       AL L   MA+  G     C PN V+Y T+I+G   EG VDKA 
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGR---SCPPNVVSYATVINGFFTEGQVDKAY 223

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L L+M D+ I+PNVVTYT+VI G C A+  + A+ +F +M+D+GV+P+  T+N ++   
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
              GK  E  R+L+ M  HG++PD +TY +LL+  C  GR   A+  F SM   G K  V
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNV 343

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y ILI+GY     +     L + M+  G+ PD  I N +F    +   ++ A  +F++
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M++ G++ D   +   ID LCK G + +AV  F+ +       +I  +NSL+ GLC   +
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E A E +  +    + P+VV ++ ++  LC  GQ+ KA+ L   ME     P+VI++  
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523

Query: 420 LIRGFI---RINEPSKVIELLHKMKEINVMPD 448
           LI G     RI+E +K +++   M  + + PD
Sbjct: 524 LIGGHCLVGRIDEAAKSLDV---MLSVGLKPD 552



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 259/506 (51%), Gaps = 41/506 (8%)

Query: 6   HGFVVLG------RILKSC----FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG++ +G      R+L+        PD  T+ SL+  LC   R  EA   F  +   G +
Sbjct: 281 HGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIK 340

Query: 56  PDVFTYTTLVNGLCRTS-----HTIVALNLFEEMANGNGEFGVV---------------- 94
           P+V  Y  L++G          H ++ L +   ++  +  F ++                
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400

Query: 95  --------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                     P+ V +  +ID LCK G VD A     QM ++ + PN+  + S++ G C 
Sbjct: 401 FNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCT 460

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W +AK  + EM++QG++P+VV FN I+  LC  G++ +A RL+DLM + G RPD  +
Sbjct: 461 VDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVIS 520

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y TL+ G CL GR++ A +    M S+G K   ++Y+ L++GYC+   I+ A  ++ EML
Sbjct: 521 YTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREML 580

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             GI P VV ++T+  GLF   +   A +L+  M  +G   + W Y   ++GL KN  + 
Sbjct: 581 RNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVD 640

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA +LF +L     + +I  +N +I  L KSGR E A+ LF ++    LVP+V TY ++ 
Sbjct: 641 EAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIA 700

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L  +G +++  DLF  ME++   PN    + L+R  +   + ++    L K+ E N  
Sbjct: 701 ENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFS 760

Query: 447 PDASIVSIVVDLLAKNEI--SLNSLP 470
            +AS  ++++ LL+++E      SLP
Sbjct: 761 LEASTTAMLISLLSRDEYHHHATSLP 786



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 163/336 (48%), Gaps = 4/336 (1%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P++ TY+ +I  FC           F  ++  G + N +  N ++  LC   ++ EA 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 190 RLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMG--CKHTVFSYSIL 245
            +L   M + G  PD  +YNTLL GFC   R   A EL   M +S G  C   V SY+ +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ING+    +++ A +L+ EM+ +GI+P+VV + T+  GL +   V+RA  +F +M   GV
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D  TY   I G    G   E V +   +     + D   Y SL++ LC +GR   A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
            F S+    + PNV  Y I+I G    G + +  DL   M EN + P+   F+++   + 
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +     + + + +KMK+  + PD      ++D L K
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCK 425



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 4/318 (1%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V P++ T+++++   C+ G+++       L+++ G R +    N LL G C   R+  A 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 225 ELFVS-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPDVVIHNTL 280
           ++ +  M  +GC   V SY+ L+ G+C  K  E AL L   M     +   P+VV + T+
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G F   QV++A+ LF EM   G+  +  TY T IDGLCK   +  A  +F  +     
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D   YN LI G    G+ +  + +   +    L P+  TY  ++  LCN+G+  +AR 
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            F  M    + PNV  + +LI G+      S++ +LL+ M E  + PD  I +I+    A
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 461 KNEISLNSLPSFTVHEQQ 478
           K  +   ++  F   +QQ
Sbjct: 390 KKAMIDEAMHIFNKMKQQ 407



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 6/261 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+      L  +L     PD  T+ +L+ G C   RI +A  +F ++   G  P V T
Sbjct: 531 VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVT 590

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+T+++GL  T     A  L+  M     ++      N   Y  I++GL K   VD+A +
Sbjct: 591 YSTILHGLFTTRRFSEAKELYLNMITSGKQW------NIWIYNIILNGLSKNNCVDEAFK 644

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   +  K+ +  + T+  +I     +    +A  LF  +   G+ P+V T+ +I + L 
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLI 704

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G ++E   L   M + G  P++   N L+      G +  A      ++         
Sbjct: 705 EEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEAS 764

Query: 241 SYSILINGYCKNKEIEGALSL 261
           + ++LI+   +++    A SL
Sbjct: 765 TTAMLISLLSRDEYHHHATSL 785


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 163/481 (33%), Positives = 255/481 (53%), Gaps = 31/481 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS-----HTI 75
           PD  T+  L+  LC   +  EA +LF  +   G +P V  Y  +++G  +       H +
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492

Query: 76  VALNLFEEMANGNGEFG-VVC-----------------------EPNTVTYTTIIDGLCK 111
           + L +   ++  +  F  V+C                        PN VTY T+ID LCK
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G VD A     QM ++ + PN V + S++ G C    W + + LF+EM++QG++P++V 
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           FN ++  LCK G++ EA RL+D M+  G++PD  +YNTL+DG C   R++ A +L   M 
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           S G K  + SY+ L++GYCK   I+ A  L+ EML KG+ P V  +NT+  GLF   +  
Sbjct: 673 SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFS 732

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +L+  M ++       TY   +DG CKN    EA ++F +L  +  + DI  +N +I
Sbjct: 733 EARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMI 792

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DGL K GR E A++LF ++P   LVP+VVTY ++   L  +G +++   LF  ME++   
Sbjct: 793 DGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTA 852

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN--SL 469
           PN    + LIR  +   E  +    L K+ E N   +AS  S+++ L ++ E   +  SL
Sbjct: 853 PNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSL 912

Query: 470 P 470
           P
Sbjct: 913 P 913



 Score =  270 bits (691), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 154/462 (33%), Positives = 241/462 (52%), Gaps = 7/462 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVF 59
           +GR+  GF   G ILK+ +  D +    L+KGLC   R+ EA   L  ++   GC   V 
Sbjct: 97  IGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVV 156

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y TL+ GLC       A  L   M +G       C P+ V+Y  +I+G   EG VDKA 
Sbjct: 157 SYNTLLKGLCDRRRAEEARELLHMMVDGQDS---SCSPDVVSYNIVINGFFNEGQVDKAY 213

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L L+M    + P+VVTY ++I G C A++ + A+ +F +M+++GV+PN VT+N I+D L
Sbjct: 214 SLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGL 270

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK  ++D A  +   M+  GV+P   TYNT++DG C    V+ A+ +F  M   G K   
Sbjct: 271 CKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDH 330

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +I+G CK + I+ A  ++ +M+ KG+KPD + +  +  GL +   V+RA  +F +
Sbjct: 331 VTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQ 390

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   GV  +  TY   I G    G   E V+    +     E D+  Y  L+D LCK+G+
Sbjct: 391 MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGK 450

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
              A  LF S+    + P+V  Y IM+ G    G + +  DL   M  N + PN   F+ 
Sbjct: 451 CNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNT 510

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +I  + +     +V+ +  KMK+  + P+      ++D L K
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552



 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 249/488 (51%), Gaps = 41/488 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V  +++     P  VT+ ++I GLC    +  A  +F ++   G +PD  TY T+++GLC
Sbjct: 282 VFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  +F++M +     GV  +P+ +TYT IIDGLCK   VD+A+ +  QM DK 
Sbjct: 342 KAQAIDKAEGVFQQMIDK----GV--KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKG 395

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +KPN  TY  +I G+     W E  +   EM    ++P+V T+ +++D LCKNGK +EA 
Sbjct: 396 VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEAR 455

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL----------------------- 226
            L D MI+ G++P    Y  +L G+   G ++   +L                       
Sbjct: 456 SLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAY 515

Query: 227 ------------FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
                       F+ M+  G    V +Y  LI+  CK   ++ A+  +++M+++G+ P+ 
Sbjct: 516 AKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNN 575

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V+ N+L  GL  + + E+  +LF EM   G+  D   + T +  LCK G ++EA  L  +
Sbjct: 576 VVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDS 635

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +  +  + D+ +YN+LIDG C + R++ A++L   +    L PN+V+Y+ ++ G C  G+
Sbjct: 636 MVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGR 695

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D A  LF +M    V P V T++ ++ G  R    S+  EL   M +   +      SI
Sbjct: 696 IDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSI 755

Query: 455 VVDLLAKN 462
           ++D   KN
Sbjct: 756 ILDGFCKN 763



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 240/438 (54%), Gaps = 6/438 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD VT+ ++I GLC    +  A  +F ++   G +P+  TY T+++GLC+     +A  
Sbjct: 222 SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEG 281

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +F++M +     GV  +P+ VTY TIIDGLCK   VD+A+ +  QM D+ +KP+ VTY +
Sbjct: 282 VFQKMVDK----GV--KPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNT 335

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C A+  ++A+ +F +M+D+GV+P+ +T+ +I+D LCK   +D A  +   MI  G
Sbjct: 336 IIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKG 395

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V+P+  TYN L+ G+  TG+     +    M +   +  VF+Y +L++  CKN +   A 
Sbjct: 396 VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEAR 455

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           SL+  M+ KGIKP V I+  +  G  +   +     L + M  NG++ +   + T I   
Sbjct: 456 SLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAY 515

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K   I E + +F  ++      ++  Y +LID LCK GR++ A+  F  +    + PN 
Sbjct: 516 AKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNN 575

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           V ++ ++ GLC   + +K  +LFL+M    + P+++ F+ ++    +     +   L+  
Sbjct: 576 VVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDS 635

Query: 440 MKEINVMPDASIVSIVVD 457
           M  + + PD    + ++D
Sbjct: 636 MVCMGLKPDVISYNTLID 653



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 245/473 (51%), Gaps = 16/473 (3%)

Query: 13  RILKSC---FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           R+L+ C     PD  T++ +I   C   R+    A F  +   G   D      L+ GLC
Sbjct: 71  RMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLC 130

Query: 70  RTSHTIVALN-LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM--- 125
            T     A++ L  +M        V C    V+Y T++ GLC     ++A+ELL  M   
Sbjct: 131 DTKRVGEAMHVLLRQMPE------VGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           +D +  P+VV+Y  VI GF      ++A  LF+EM   GV P+VVT+N I+D LCK  ++
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEV 241

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           D A  +   M++ GV+P+  TYNT++DG C    V+ A+ +F  M   G K +  +Y+ +
Sbjct: 242 DRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTI 301

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I+G CK + ++ A  ++ +M+ +G+KPD V +NT+  GL +   +++A  +F +M   GV
Sbjct: 302 IDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D  TY   IDGLCK   +  A  +F  +     + +   YN LI G   +G+ E  ++
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQ 421

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
             + +    L P+V TY +++  LC +G+ ++AR LF  M    + P+V  + +++ G+ 
Sbjct: 422 RIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYG 481

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           +    S++ +LL+ M    + P+  I + V+   AK  +    +  F   +QQ
Sbjct: 482 KKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ 534



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 170/331 (51%), Gaps = 12/331 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV    +   +++    TP+ V F SL+ GLC   +  +   LF ++   G  PD+  
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC---EPNTVTYTTIIDGLCKEGFVDK 117
           + T++  LC+    + A  L + M         VC   +P+ ++Y T+IDG C    +D+
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSM---------VCMGLKPDVISYNTLIDGHCFASRMDE 663

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A +LL  M    +KPN+V+Y +++ G+C A   + A  LF EM+ +GV P V T+N I++
Sbjct: 664 AVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILN 723

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            L ++G+  EA  L   MI+        TY+ +LDGFC     + A ++F S+ SM  + 
Sbjct: 724 GLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQL 783

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            + +++I+I+G  K    E A+ L++ + + G+ P VV +  +   L E   +E    LF
Sbjct: 784 DIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLF 843

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
             M+++G A ++      I  L   G I  A
Sbjct: 844 SVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 153/323 (47%), Gaps = 6/323 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L     PD V F +++  LC E R+MEA  L   +   G +PDV +Y TL++G C  S 
Sbjct: 601 MLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASR 660

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A+ L + M +         +PN V+Y T++ G CK G +D A  L  +M  K + P 
Sbjct: 661 MDEAVKLLDGMVSAG------LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPG 714

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V TY +++ G   +  ++EA+ L++ M+      ++ T+++I+D  CKN   DEA ++  
Sbjct: 715 VETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQ 774

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            +    ++ D  T+N ++DG    GR   A +LF ++ + G   +V +Y ++     +  
Sbjct: 775 SLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEG 834

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            +E    L+S M   G  P+  + N L   L +  ++ RA     ++     + +  T  
Sbjct: 835 SLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTS 894

Query: 314 TFIDGLCKNGYIVEAVELFHTLR 336
             I    +  Y   A  L    R
Sbjct: 895 MLISLFSREEYQQHAKSLPEKCR 917



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 140/301 (46%), Gaps = 7/301 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     ++  ++     PD +++ +LI G C  SR+ EA  L   +   G +P++ +Y
Sbjct: 624 GRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSY 683

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+      A  LF EM       GV   P   TY TI++GL + G   +A+EL
Sbjct: 684 NTLLHGYCKAGRIDNAYCLFREMLRK----GVT--PGVETYNTILNGLFRSGRFSEAREL 737

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            + M       ++ TY+ ++ GFC    ++EA ++F  +    +Q +++TFN+++D L K
Sbjct: 738 YVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK 797

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ ++A  L   +  +G+ P   TY  + +     G +     LF  ME  G       
Sbjct: 798 GGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHM 857

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            + LI       EI  A +  S++  K    +     ++ + LF   + ++  K   E  
Sbjct: 858 LNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEAST-TSMLISLFSREEYQQHAKSLPEKC 916

Query: 302 R 302
           R
Sbjct: 917 R 917


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 164/452 (36%), Positives = 245/452 (54%), Gaps = 10/452 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVF 59
           MGR+ HGF   G ILKS +  + +    L+KGLC   R+ EA  +  K +   GC PDV 
Sbjct: 107 MGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVV 166

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y TL+ G C       AL L   MA+  G     C PN V+Y  +I+G   EG VDKA 
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGR---SCPPNVVSYAIVINGFFTEGQVDKAY 223

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L L+M D+ I+PNVVTYT+VI G C A+  + A+ +F +M+D+GV+P+  T+N ++   
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
              GK  E  R+L+ M  HG++PD +TY +LL+  C  GR   A+ LF SM   G K  V
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNV 343

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y ILI+GY     +     L + M+  G+ PD  I N +F    +   ++ A  +F++
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M++ G++ D   Y   ID LCK G + +AV  F+ +       +I  +NSL+ GLC   +
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E A E +  +    + P+VV ++ ++  LC  GQ+ KA+ L   ME     P VI++  
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523

Query: 420 LIRGFI---RINEPSKVIELLHKMKEINVMPD 448
           LI G     RI+E +K +++   M  + + PD
Sbjct: 524 LIGGHCLVGRIDEAAKSLDV---MLSVGLKPD 552



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 259/506 (51%), Gaps = 41/506 (8%)

Query: 6   HGFVVLG------RILKSC----FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG++ +G      R+L+        PD  T+ SL+  LC   R  EA  LF  +   G +
Sbjct: 281 HGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIK 340

Query: 56  PDVFTYTTLVNGLCRTS-----HTIVALNLFEEMANGNGEFGVV---------------- 94
           P+V  Y  L++G          H ++ L +   ++  +  F ++                
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400

Query: 95  --------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                     P+ V Y  +ID LCK G VD A     QM ++ + PN+  + S++ G C 
Sbjct: 401 FNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCT 460

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W +AK  + EM++QG++P+VV FN I+  LC  G++ +A RL+DLM + G RP   +
Sbjct: 461 VDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVIS 520

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y TL+ G CL GR++ A +    M S+G K   ++Y+ L++GYC+   I+ A  ++ EML
Sbjct: 521 YTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREML 580

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             GI P VV ++T+  GLF   +   A +L+  M  +G   + W Y   ++GL KN  + 
Sbjct: 581 RNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVD 640

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA +LF +L     + +I  +N +I  L KSGR E A+ LF ++    LVP+V TY ++ 
Sbjct: 641 EAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIA 700

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L  +G +++  DLF  ME++   PN    + L+R  +   + ++    L K+ E N  
Sbjct: 701 ENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFS 760

Query: 447 PDASIVSIVVDLLAKNEI--SLNSLP 470
            +AS  ++++ LL+++E      SLP
Sbjct: 761 LEASTTAMLISLLSRDEYHHHATSLP 786



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 4/336 (1%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+  TY+ +I  FC           F  ++  G + N +  N ++  LC   ++ EA 
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 190 RLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM---ESMGCKHTVFSYSIL 245
            +L   M + G  PD  +YNTLL GFC   R   A EL   M   +   C   V SY+I+
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ING+    +++ A +L+ EM+ +GI+P+VV + T+  GL +   V+RA  +F +M   GV
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D  TY   I G    G   E V +   +     + D   Y SL++ LC +GR   A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           LF S+    + PNV  Y I+I G    G + +  DL   M EN + P+   F+++   + 
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +     + + + +KMK+  + PD      ++D L K
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCK 425



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 155/318 (48%), Gaps = 4/318 (1%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V P+  T+++++   C+ G+++       L+++ G R +    N LL G C   R+  A 
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 225 ELFVS-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPDVVIHNTL 280
           ++ V  M  +GC   V SY+ L+ G+C  K  E AL L   M     +   P+VV +  +
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G F   QV++A+ LF EM   G+  +  TY T IDGLCK   +  A  +F  +     
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D   YN LI G    G+ +  + +   +    L P+  TY  ++  LCN+G+  +AR 
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           LF  M    + PNV  + +LI G+      S++ +LL+ M E  + PD  I +I+    A
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 461 KNEISLNSLPSFTVHEQQ 478
           K  +   ++  F   +QQ
Sbjct: 390 KKAMIDEAMHIFNKMKQQ 407



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 6/261 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+      L  +L     PD  T+ +L+ G C   RI +A  +F ++   G  P V T
Sbjct: 531 VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVT 590

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+T+++GL  T     A  L+  M     ++      N   Y  I++GL K   VD+A +
Sbjct: 591 YSTILHGLFTTRRFSEAKELYLNMITSGKQW------NIWIYNIILNGLSKNNCVDEAFK 644

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   +  K+ +  + T+  +I     +    +A  LF  +   G+ P+V T+ +I + L 
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLI 704

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G ++E   L   M + G  P++   N L+      G +  A      ++         
Sbjct: 705 EEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEAS 764

Query: 241 SYSILINGYCKNKEIEGALSL 261
           + ++LI+   +++    A SL
Sbjct: 765 TTAMLISLLSRDEYHHHATSL 785


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 145/394 (36%), Positives = 227/394 (57%), Gaps = 6/394 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P   T   ++  +C  S+   A+    K+   G EPD+ T+T+L++G C  +    AL 
Sbjct: 114 SPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALA 173

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF+++       G+   PN VTYTT+I  LCK   ++ A E+  QM D  I+PNVVTY S
Sbjct: 174 LFDQIV------GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G C    W++A  L  +MM +G+QPNV+TF  ++D   K GK+ EA  L  +MIQ  
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS 287

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V PD FTY  L++G C  GR++ A+++F  MES G      +Y+ LI+G+CK+K +E   
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGT 347

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++ EM  KG+  + + +  L  G   + + + A ++F++M       D  TY   +DGL
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C NGY+ +A+ +F  +R  + + +I  Y  +I G+CK G++E A +LF SL    + PNV
Sbjct: 408 CYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNV 467

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           +TY+ MI G C  G + +A  LF  M+E+  +PN
Sbjct: 468 ITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 150/439 (34%), Positives = 240/439 (54%), Gaps = 6/439 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R++ S   P  V FT L+  +    R     +LF ++++ G  P ++T   ++N +CR+S
Sbjct: 72  RMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSS 131

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A     +M     + G   EP+ VT+T+++ G C    ++ A  L  Q+     +P
Sbjct: 132 QPCRASCFLGKMM----KLGF--EPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRP 185

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           NVVTYT++I   C  +  N A  +F +M D G++PNVVT+N ++  LC+ G+  +A+ LL
Sbjct: 186 NVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLL 245

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M++ G++P+  T+  L+D F   G++  AKEL+  M  M     VF+Y+ LING C  
Sbjct: 246 RDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTY 305

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             ++ A  ++  M S G  P+ V + TL  G  +  +VE   K+F EM + G+ A+T TY
Sbjct: 306 GRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITY 365

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I G C  G    A E+F+ +   +   DIR YN L+DGLC +G +E AL +F+ +  
Sbjct: 366 TVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRK 425

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             +  N+VTY+I+I G+C  G+++ A DLF  +    + PNVIT+  +I GF R     +
Sbjct: 426 REMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHE 485

Query: 433 VIELLHKMKEINVMPDASI 451
              L  KMKE   +P+ S+
Sbjct: 486 ADALFKKMKEDGFLPNESV 504



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 205/368 (55%), Gaps = 6/368 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LG+++K  F PD VTFTSL+ G C  +RI +A ALF ++   G  P+V TYTTL++ LC+
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
             H   A+ +F +M    G+ G+   PN VTY +++ GLC+ G    A  LL  M  + I
Sbjct: 200 NRHLNHAVEIFNQM----GDNGI--RPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGI 253

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +PNV+T+T++I  F       EAK L+  M+   V P+V T+  +++ LC  G++DEA +
Sbjct: 254 QPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQ 313

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +  LM  +G  P+  TY TL+ GFC + RV    ++F  M   G      +Y++LI GYC
Sbjct: 314 MFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYC 373

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
                + A  ++++M S+   PD+  +N L  GL     VE+A  +F  M++  +  +  
Sbjct: 374 LVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIV 433

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY   I G+CK G + +A +LF +L     + ++  Y ++I G C+ G +  A  LF+ +
Sbjct: 434 TYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKM 493

Query: 371 PCGVLVPN 378
                +PN
Sbjct: 494 KEDGFLPN 501



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 192/364 (52%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           ++A +L  +M      P++V +T ++      K ++    LF +M   G+ P + T N++
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           M+ +C++ +   AS  L  M++ G  PD  T+ +LL GFC   R+  A  LF  +  MG 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V +Y+ LI+  CKN+ +  A+ ++++M   GI+P+VV +N+L  GL EI +   A  
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M + G+  +  T+   ID   K G I+EA EL+  +  +    D+  Y +LI+GLC
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLC 303

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             GRL+ A ++F  +      PN VTY+ +I G C   +++    +F +M +  +V N I
Sbjct: 304 TYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTI 363

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
           T+ +LI+G+  +  P    E+ ++M      PD    ++++D L  N     +L  F   
Sbjct: 364 TYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYM 423

Query: 476 EQQE 479
            ++E
Sbjct: 424 RKRE 427



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 181/334 (54%), Gaps = 6/334 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     +  +I+   F P+ VT+T+LI  LC    +  A  +F ++   G  P+V TY 
Sbjct: 167 RIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYN 226

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +LV+GLC       A  L  +M     + G+  +PN +T+T +ID   K G + +AKEL 
Sbjct: 227 SLVSGLCEIGRWSDAAWLLRDMM----KRGI--QPNVITFTALIDAFVKVGKIMEAKELY 280

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M   ++ P+V TYT++I G C     +EA+++F  M   G  PN VT+  ++   CK+
Sbjct: 281 KVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKS 340

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++++ +++   M Q G+  +  TY  L+ G+CL GR + A+E+F  M S      + +Y
Sbjct: 341 KRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTY 400

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++L++G C N  +E AL ++  M  + +  ++V +  +  G+ ++ +VE AF LF  +  
Sbjct: 401 NVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFS 460

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            G+  +  TY T I G C+ G+I EA  LF  ++
Sbjct: 461 KGMKPNVITYTTMISGFCRRGFIHEADALFKKMK 494



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 187/385 (48%), Gaps = 6/385 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           AL+LF  M +          P+ V +T ++  + K    D    L  QM+   I P + T
Sbjct: 66  ALDLFTRMVHSRPL------PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYT 119

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
              V+   C +     A     +MM  G +P++VTF  ++   C   ++++A  L D ++
Sbjct: 120 CNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV 179

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G RP+  TY TL+   C    +NHA E+F  M   G +  V +Y+ L++G C+     
Sbjct: 180 GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWS 239

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L  +M+ +GI+P+V+    L     ++ ++  A +L+  M +  V  D +TY   I
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLC  G + EA ++F+ +       +   Y +LI G CKS R+E   ++F  +    LV
Sbjct: 300 NGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV 359

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            N +TY+++I G C  G+ D A+++F  M      P++ T+++L+ G        K + +
Sbjct: 360 ANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMI 419

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
              M++  +  +    +I++  + K
Sbjct: 420 FKYMRKREMDINIVTYTIIIQGMCK 444



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 148/273 (54%), Gaps = 6/273 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR S    +L  ++K    P+ +TFT+LI       +IMEA  L+  +      PDVFT
Sbjct: 235 IGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFT 294

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+NGLC       A  +F  M + NG +     PN VTYTT+I G CK   V+   +
Sbjct: 295 YTALINGLCTYGRLDEARQMFYLMES-NGYY-----PNEVTYTTLIHGFCKSKRVEDGTK 348

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  K +  N +TYT +I+G+C     + A+ +F +M  +   P++ T+NV++D LC
Sbjct: 349 IFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLC 408

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            NG +++A  +   M +  +  +  TY  ++ G C  G+V  A +LF S+ S G K  V 
Sbjct: 409 YNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVI 468

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +Y+ +I+G+C+   I  A +L+ +M   G  P+
Sbjct: 469 TYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 165/321 (51%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y  ++R   +   +NEA  LF  M+     P++V F  ++  + K  + D    L + M 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+ P  +T N +++  C + +   A      M  +G +  + +++ L++G+C    IE
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL+L+ +++  G +P+VV + TL   L +   +  A ++F++M  NG+  +  TY + +
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            GLC+ G   +A  L   +     + ++  + +LID   K G++  A EL++ +    + 
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+V TY+ +I GLC  G++D+AR +F  ME N   PN +T+  LI GF +        ++
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349

Query: 437 LHKMKEINVMPDASIVSIVVD 457
            ++M +  ++ +    ++++ 
Sbjct: 350 FYEMSQKGLVANTITYTVLIQ 370



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 1/218 (0%)

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           IL NG   N +   AL L++ M+     P +V    L   + ++ + +    LF++MQ  
Sbjct: 53  ILRNGL-HNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQIL 111

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G++   +T    ++ +C++     A      +  L  E D+  + SL+ G C   R+E A
Sbjct: 112 GISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDA 171

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L LF  +      PNVVTY+ +I  LC +  ++ A ++F  M +N + PNV+T++ L+ G
Sbjct: 172 LALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSG 231

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              I   S    LL  M +  + P+    + ++D   K
Sbjct: 232 LCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVK 269


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 160/489 (32%), Positives = 255/489 (52%), Gaps = 31/489 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+     V L ++      PD VT+ SL+  LC   R  EA  +F  +   G +P++ TY
Sbjct: 172 GQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGV-VC------------------- 95
            TL+ G   T   +V ++   ++   NG       F + VC                   
Sbjct: 232 GTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 290

Query: 96  ----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                PN VTY  +I  LCK G V+ A     QM D+ + P  + Y S+I G C    W 
Sbjct: 291 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 350

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
            A+ L +EM+D+G+  N + FN I+D  CK G++ E+ +L DLM++ GV+PD  TY+TL+
Sbjct: 351 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 410

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+CL G+++ A +L  SM S+G K    +YS LINGYCK   ++ AL L+ EM S G+ 
Sbjct: 411 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVS 470

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PD++ +N +  GLF+  +   A +L+  + ++G   +  TY   + GLCKN    +A+ +
Sbjct: 471 PDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRM 530

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  L ++  + + R +N +ID L K GR + A +LF +     LVPN  TY +M   +  
Sbjct: 531 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 590

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G +++   LFL ME+N    +    + ++R  ++  E ++    L  + E +   +AS 
Sbjct: 591 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 650

Query: 452 VSIVVDLLA 460
            S+ +DLL+
Sbjct: 651 ASLFIDLLS 659



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 249/489 (50%), Gaps = 43/489 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPDVFTYTTLVNGLCRTSHTIVAL 78
           PD  ++  L+ GLC E+R  EA  L   +   G  C PDV +Y+T++NG  +        
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           + + EM +          PN VTY +II  LCK   VDKA E+L  M    + P+ +TY 
Sbjct: 109 STYNEMLDQR------ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYN 162

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S++ GFC +    EA     +M   GV+P+VVT+N +MD LCKNG+  EA ++ D M + 
Sbjct: 163 SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 222

Query: 199 GVRPDAFTYNTLLDGFCLTG-----------------------------------RVNHA 223
           G++P+  TY TLL G+   G                                   +V  A
Sbjct: 223 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEA 282

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             +F  M   G      +Y  +I   CK+  +E A+  + +M+ +G+ P  +++N+L  G
Sbjct: 283 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 342

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L   ++ ERA +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +  +  + D
Sbjct: 343 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 402

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           I  Y++LIDG C +G+++ A +L  S+    + P+ VTYS +I G C   +M  A  LF 
Sbjct: 403 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFR 462

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +ME + V P++IT++++++G  +    +   EL   + +     + S  +I++  L KN+
Sbjct: 463 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNK 522

Query: 464 ISLNSLPSF 472
           ++ ++L  F
Sbjct: 523 LTDDALRMF 531



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 3/279 (1%)

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYS 243
           ++A  + D +++ G+ PD F+YN LL+G C   R   A EL   M   G  C   V SYS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +ING+ K  +++   S Y+EML + I P+VV +N++   L +   V++A ++   M ++
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           GV  D  TY + + G C +G   EA+     +R    E D+  YNSL+D LCK+GR   A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++F S+    L P + TY  ++ G    G + +   L   M  N + PN   F +L+  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + +  +  + + +  KM++  + P+A     V+ +L K+
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 311



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 144/303 (47%), Gaps = 6/303 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + + F S+I   C E R++E+  LF  +   G +PD+ TY+TL++G C       A  L 
Sbjct: 367 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 426

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M +      V  +P+ VTY+T+I+G CK   +  A  L  +M+   + P+++TY  ++
Sbjct: 427 ASMVS------VGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIIL 480

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G    +    AK L++ +   G Q  + T+N+I+  LCKN   D+A R+   +    ++
Sbjct: 481 QGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 540

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +A T+N ++D     GR + AK+LFV+  S G     ++Y ++         +E    L
Sbjct: 541 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 600

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M   G   D  + N +   L +  ++ RA      +     + +  T   FID L  
Sbjct: 601 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 660

Query: 322 NGY 324
             Y
Sbjct: 661 GKY 663



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 124/242 (51%), Gaps = 2/242 (0%)

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIHNTLFVGLFEIHQVERAFKL 296
           VFSY+IL+NG C     + AL L   M   G    PDVV ++T+  G F+   +++ +  
Sbjct: 51  VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYST 110

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           ++EM    ++ +  TY + I  LCK   + +A+E+  T+       D   YNS++ G C 
Sbjct: 111 YNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 170

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           SG+ + A+   + +    + P+VVTY+ ++  LC +G+  +AR +F  M +  + P + T
Sbjct: 171 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITT 230

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
           +  L++G+       ++  LL  M    + P+  + SI+V   AK E    ++  F+   
Sbjct: 231 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 290

Query: 477 QQ 478
           QQ
Sbjct: 291 QQ 292



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 6/212 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+  +   G + ++ T
Sbjct: 451 ISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELST 510

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+   T  AL +F+ +   + +          T+  +ID L K G  D+AK+
Sbjct: 511 YNIILHGLCKNKLTDDALRMFQNLCLMDLKL------EARTFNIMIDALLKVGRNDEAKD 564

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L +      + PN  TY  +           E  +LF+ M D G   +    N I+ EL 
Sbjct: 565 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 624

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           + G++  A   L ++ +     +A T +  +D
Sbjct: 625 QRGEITRAGTYLSMIDEKHFSLEASTASLFID 656


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 146/391 (37%), Positives = 229/391 (58%), Gaps = 9/391 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  ++  +I  LC  SR + A ++  K+  FG EPDV T ++L+NG C+ +    A++L 
Sbjct: 44  DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 103

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M     E G    P+ V Y TIIDG CK G V+ A EL  +M+   ++ + VTY S++
Sbjct: 104 SKME----EMGF--RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 157

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +  W++A RL  +M+ + + PNV+TF  ++D   K GK  EA +L + M +  V 
Sbjct: 158 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 217

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD FTYN+L++G C+ GRV+ AK++   M + GC   V +Y+ LING+CK+K ++    L
Sbjct: 218 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 277

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EM  +G+  D + +NT+  G F+  + + A ++F  M       +  TY   + GLC 
Sbjct: 278 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 334

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           N  + +A+ LF  ++  + E DI  YN +I G+CK G +E A +LFRSL C  L P+VV+
Sbjct: 335 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 394

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           Y+ MI G C   Q DK+  L+  M+E+ ++P
Sbjct: 395 YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 232/427 (54%), Gaps = 9/427 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  V F+ ++  +          +LF  + V G   D+++Y  ++N LCR S  ++AL++
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M     +FG   EP+ VT +++I+G C+   V  A +L+ +M++   +P+VV Y ++
Sbjct: 68  VGKMM----KFGY--EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI 121

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C     N+A  LF  M   GV+ + VT+N ++  LC +G+  +A+RL+  M+   +
Sbjct: 122 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  T+  ++D F   G+ + A +L+  M        VF+Y+ LING C +  ++ A  
Sbjct: 182 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 241

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +   M++KG  PDVV +NTL  G  +  +V+   KLF EM + G+  DT TY T I G  
Sbjct: 242 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 301

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G    A E+F  +       +IR Y+ L+ GLC + R+E AL LF ++    +  ++ 
Sbjct: 302 QAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 358

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I+I G+C  G ++ A DLF  +    + P+V+++  +I GF R  +  K   L  KM
Sbjct: 359 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 418

Query: 441 KEINVMP 447
           +E  ++P
Sbjct: 419 QEDGLLP 425



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 209/368 (56%), Gaps = 9/368 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V+G+++K  + PD VT +SLI G C  +R+ +A  L +K+   G  PDV  Y T+++G C
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A+ LF+ M       GV    + VTY +++ GLC  G    A  L+  M  ++
Sbjct: 127 KIGLVNDAVELFDRMERD----GV--RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I PNV+T+T+VI  F     ++EA +L+ EM  + V P+V T+N +++ LC +G++DEA 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           ++LDLM+  G  PD  TYNTL++GFC + RV+   +LF  M   G      +Y+ +I GY
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +    + A  ++S M S   +P++  ++ L  GL    +VE+A  LF+ MQ++ +  D 
Sbjct: 301 FQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 357

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I G+CK G + +A +LF +L     + D+ +Y ++I G C+  + + +  L+R 
Sbjct: 358 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 417

Query: 370 LPCGVLVP 377
           +    L+P
Sbjct: 418 MQEDGLLP 425



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 170/319 (53%), Gaps = 9/319 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     ++ ++ +  F PD V + ++I G C    + +A  LF ++   G   D  TY 
Sbjct: 95  RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN 154

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +LV GLC +     A  L  +M   +        PN +T+T +ID   KEG   +A +L 
Sbjct: 155 SLVAGLCCSGRWSDAARLMRDMVMRD------IVPNVITFTAVIDVFVKEGKFSEAMKLY 208

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  + + P+V TY S+I G C     +EAK++   M+ +G  P+VVT+N +++  CK+
Sbjct: 209 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 268

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DE ++L   M Q G+  D  TYNT++ G+   GR + A+E+F  M+S   +  + +Y
Sbjct: 269 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTY 325

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           SIL+ G C N  +E AL L+  M    I+ D+  +N +  G+ +I  VE A+ LF  +  
Sbjct: 326 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 385

Query: 303 NGVAADTWTYRTFIDGLCK 321
            G+  D  +Y T I G C+
Sbjct: 386 KGLKPDVVSYTTMISGFCR 404



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 165/305 (54%), Gaps = 9/305 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V+    +  R+ +     DAVT+ SL+ GLC   R  +AA L   + +    P+V T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T +++   +      A+ L+EEM           +P+  TY ++I+GLC  G VD+AK+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRR------CVDPDVFTYNSLINGLCMHGRVDEAKQ 241

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  M  K   P+VVTY ++I GFC +K  +E  +LF EM  +G+  + +T+N I+    
Sbjct: 242 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 301

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+ D A  +   M     RP+  TY+ LL G C+  RV  A  LF +M+    +  + 
Sbjct: 302 QAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 358

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+I+I+G CK   +E A  L+  +  KG+KPDVV + T+  G     Q +++  L+ +M
Sbjct: 359 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 418

Query: 301 QRNGV 305
           Q +G+
Sbjct: 419 QEDGL 423



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 185/365 (50%), Gaps = 3/365 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ V ++ ++  + K    D    L   M+   I  ++ +Y  VI   C    +  A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +MM  G +P+VVT + +++  C+  ++ +A  L+  M + G RPD   YNT++DG C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G VN A ELF  ME  G +    +Y+ L+ G C +     A  L  +M+ + I P+V+ 
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
              +     +  +   A KL++EM R  V  D +TY + I+GLC +G + EA ++   + 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C  D+  YN+LI+G CKS R++   +LFR +    LV + +TY+ +I G    G+ D
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A+++F  M+     PN+ T+ +L+ G        K + L   M++  +  D +  +IV+
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364

Query: 457 DLLAK 461
             + K
Sbjct: 365 HGMCK 369



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 144/271 (53%), Gaps = 9/271 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    ++  ++     P+ +TFT++I     E +  EA  L+ ++     +PDVFTY
Sbjct: 164 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 223

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC       A  + + M          C P+ VTY T+I+G CK   VD+  +L
Sbjct: 224 NSLINGLCMHGRVDEAKQMLDLMVTKG------CLPDVVTYNTLINGFCKSKRVDEGTKL 277

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  + +TY ++I+G+  A   + A+ +F  M     +PN+ T+++++  LC 
Sbjct: 278 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCM 334

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N ++++A  L + M +  +  D  TYN ++ G C  G V  A +LF S+   G K  V S
Sbjct: 335 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 394

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           Y+ +I+G+C+ ++ + +  LY +M   G+ P
Sbjct: 395 YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 137/272 (50%), Gaps = 6/272 (2%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           MIQ    P    ++ +L     +   +    LF  ME  G  H ++SY+I+IN  C+   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
              ALS+  +M+  G +PDVV  ++L  G  + ++V  A  L  +M+  G   D   Y T
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            IDG CK G + +AVELF  +       D   YNSL+ GLC SGR   A  L R +    
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPS 431
           +VPNV+T++ +I     +G+  +A  L+ +M    V P+V T++ LI G     R++E  
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           ++++L   M     +PD    + +++   K++
Sbjct: 241 QMLDL---MVTKGCLPDVVTYNTLINGFCKSK 269


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 154/424 (36%), Positives = 238/424 (56%), Gaps = 13/424 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S    +  R++K+ ++PD VT+ +L+ G C    + EA  +F      G  PDV TY
Sbjct: 24  GRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTY 83

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+      A  + + M + N        P+ VTY ++++GLCK G VD+A+ L
Sbjct: 84  NALINGFCKADKLDEAQRILQRMVSEN------LVPDVVTYNSLVNGLCKNGRVDEARML 137

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYA-KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++   DK   PNV+TY+++I G C   +  +EA +LF  ++ QG +P V T+N+++D L 
Sbjct: 138 IV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLL 194

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  +++EA  L   +++HG+ PDA TY   +DG C  GRV  A  +   M+  GC   V 
Sbjct: 195 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 254

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S++ +ING CK K ++ A  L S M +KG  P+ +  NTL  G     + ++A   F EM
Sbjct: 255 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 314

Query: 301 QRNGVAADTWTYRTFIDGLCK---NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            + GV     TY   +DGLCK    G I EA+ LF  +       D+  Y++LIDGL K+
Sbjct: 315 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 374

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           G+L+ A  L  ++     +PNV TY+ +I GLC   ++D+A +LF+ M E   VP+ IT+
Sbjct: 375 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITY 434

Query: 418 DMLI 421
             +I
Sbjct: 435 GTII 438



 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 153/437 (35%), Positives = 243/437 (55%), Gaps = 13/437 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K  F P+ +T+ +L+ GLC   R+ +A AL+ ++   G  PDV TY TL++G C+     
Sbjct: 3   KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD 62

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            AL +F+    G  + G V  P+ VTY  +I+G CK   +D+A+ +L +M  +N+ P+VV
Sbjct: 63  EALKIFD----GAVKRGFV--PDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVV 116

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK-MDEASRLLDL 194
           TY S++ G C     +EA+ L +   D+G  PNV+T++ ++  LC+  + + EA +L   
Sbjct: 117 TYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGS 173

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           +++ G  P+  TYN L+DG     RVN A ELF  +   G +    +Y++ I+G CK   
Sbjct: 174 VLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +E AL +  +M  KG  PDVV HN +  GL +  +V+ A  L   M+  G + +  ++ T
Sbjct: 234 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 293

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS---GRLEIALELFRSLP 371
            I G C+ G   +A+  F  +     +  +  YN L+DGLCK+   GR++ A+ LF ++ 
Sbjct: 294 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 353

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
               VP+VVTYS +I GL   G++D AR L   ME    +PNV T++ LI G   + +  
Sbjct: 354 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVD 413

Query: 432 KVIELLHKMKEINVMPD 448
           + +EL   M E   +PD
Sbjct: 414 EALELFVAMVEKGCVPD 430



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 207/369 (56%), Gaps = 7/369 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN +TY  ++ GLC  G +  A+ L  +M      P+VVTY +++ GFC   + +EA ++
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F   + +G  P+VVT+N +++  CK  K+DEA R+L  M+   + PD  TYN+L++G C 
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVV 275
            GRV+ A+ L V     G    V +YS LI+G C+  + +  AL L+  +L +G +P+V 
Sbjct: 128 NGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N L  GL +  +V  AF+LF  + ++G+  D  TY  FIDGLCK G + +A+ +   +
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               C  D+ ++N++I+GLCK  R++ A  L   +      PN ++++ +I G C  G+ 
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV---IELLHKMKEINVMPDASIV 452
            KA   F +M +  V P V+T+++L+ G  +  +  ++   I L   M E   +PD    
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 364

Query: 453 SIVVDLLAK 461
           S ++D L K
Sbjct: 365 SALIDGLGK 373



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 183/338 (54%), Gaps = 4/338 (1%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M+     PN +TY +++ G C     ++A+ L+  M+  G  P+VVT+N ++   CK G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +DEA ++ D  ++ G  PD  TYN L++GFC   +++ A+ +   M S      V +Y+ 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL-FEIHQVERAFKLFDEMQRN 303
           L+NG CKN  ++ A  L   ++ KG  P+V+ ++TL  GL  E+  V  A KLF  + + 
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  TY   IDGL K   + EA ELF  L     E D   Y   IDGLCK+GR+E A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L + + +     VP+VV+++ +I GLC + ++D+A  L   ME     PN I+F+ LI G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             R  +  K +    +M +  V P     +I+VD L K
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCK 335



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 142/282 (50%), Gaps = 44/282 (15%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           VS    + G +LK  + P+  T+  LI GL  E R+ EA  LF+ L   G EPD  TYT 
Sbjct: 164 VSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 223

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
            ++GLC+      AL + ++M          C P+ V++  +I+GLCKE  VD+A+ LL 
Sbjct: 224 FIDGLCKAGRVEDALLMLKDMDEKG------CVPDVVSHNAVINGLCKEKRVDEAEVLLS 277

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN- 182
            M+ K   PN +++ ++I G C A  W +A   F EM+ +GV+P VVT+N+++D LCK  
Sbjct: 278 GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKAR 337

Query: 183 -------------------------------------GKMDEASRLLDLMIQHGVRPDAF 205
                                                GK+D+A RLL  M   G  P+ +
Sbjct: 338 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 397

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           TYN+L+ G C   +V+ A ELFV+M   GC     +Y  +I+
Sbjct: 398 TYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 147/272 (54%), Gaps = 8/272 (2%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M +HG  P+  TYN LL G C  GR++ A+ L+  M   G    V +Y+ L++G+CK  E
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           ++ AL ++   + +G  PDVV +N L  G  +  +++ A ++   M    +  D  TY +
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGR-LEIALELFRSLP 371
            ++GLCKNG + EA  L     I+   F  ++  Y++LI GLC+  R +  AL+LF S+ 
Sbjct: 121 LVNGLCKNGRVDEARML-----IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVL 175

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                P V TY+I+I GL  + ++++A +LF  + ++ + P+ IT+ + I G  +     
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             + +L  M E   +PD    + V++ L K +
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 267



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 34/65 (52%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +LG +      P+  T+ SLI GLC   ++ EA  LF  +   GC PD  TY
Sbjct: 375 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITY 434

Query: 62  TTLVN 66
            T+++
Sbjct: 435 GTIIS 439


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 148/435 (34%), Positives = 239/435 (54%), Gaps = 6/435 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L +  +P+  TF +++ G C    ++EA    +K+   G  PD FTYT+L+ G CR   
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKG 244

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  +F  M          C+ N V+YT +I GLC+ G +++A +L   M + N  P 
Sbjct: 245 VDNAYEVFLIMPQKG------CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPT 298

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V TYT +I     +    EA  LF EM ++G +PNV T+ V++D LCK  KMDEA ++L 
Sbjct: 299 VRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M + G+ P   TYN L+DG+C  G ++ A E+   MES  C     +Y+ LI G CK +
Sbjct: 359 EMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR 418

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           ++  A++L ++ML + + P ++ +N+L  G  +++ +E A++L   M  NG+  D WTY 
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
            FID LCK G + EA  LF +++    + +   Y +LIDG CK G++++A  L   +   
Sbjct: 479 VFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND 538

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
             +PN  TY+++I GLC + +M +A  L   M    V P V+T+ +LI   ++       
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHA 598

Query: 434 IELLHKMKEINVMPD 448
           +++ + M  +   PD
Sbjct: 599 LKVFNHMVSLGYQPD 613



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 138/439 (31%), Positives = 231/439 (52%), Gaps = 6/439 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + V++T+LI GLC   RI EA  LF  +    C P V TYT L+  L  +   + ALNLF
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM          CEPN  TYT +IDGLCKE  +D+A+++L +M +K + P+VVTY ++I
Sbjct: 323 NEMKEKG------CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C     ++A  +   M      PN  T+N ++  LCK  K+ +A  LL+ M++  + 
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P   TYN+L+ G C    +  A  L   M   G     ++YS+ I+  CK   +E A +L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  + +KG+K + VI+  L  G  ++ +++ A+ L + M  +    +++TY   I+GLCK
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
              + EA  L   +  +  +  +  Y  LI  + K G  + AL++F  +      P+V T
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+  +    + G +++  D+   M E  ++P+++T+ +LI G+ R+    +  + L  M 
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676

Query: 442 EINVMPDASIVSIVVDLLA 460
           +    P   IVSI++  L+
Sbjct: 677 DTGCKPSLYIVSILIKNLS 695



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 220/439 (50%), Gaps = 9/439 (2%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRV---FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           S+IK  C+   ++    +F K+     F  +P +  Y T++  L +         ++ E+
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            N          PN  T+  +++G CK G V +A+    ++    + P+  TYTS+I G 
Sbjct: 186 LNNQ------ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGH 239

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C  K  + A  +F+ M  +G Q N V++  ++  LC+ G+++EA +L   M +    P  
Sbjct: 240 CRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  L+     +GR   A  LF  M+  GC+  V +Y++LI+G CK  +++ A  + SE
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  KG+ P VV +N L  G  +   ++ AF++ D M+ N    +T TY   I GLCK   
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + +A+ L + +   K    +  YNSLI G CK   LE A  L   +    LVP+  TYS+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
            I  LC +G++++A  LF  ++   V  N + +  LI G+ ++ +      LL +M    
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 445 VMPDASIVSIVVDLLAKNE 463
            +P++   +++++ L K +
Sbjct: 540 CLPNSYTYNVLIEGLCKEK 558



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/591 (25%), Positives = 242/591 (40%), Gaps = 128/591 (21%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++    +   + +    P   T+T LI  L    R +EA  LF +++  GCEP+V TY
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVV------------ 94
           T L++GLC+ +    A  +  EM+               +G  + G++            
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397

Query: 95  --CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
             C PNT TY  +I GLCK+  V KA  LL +M ++ + P+++TY S+I G C   D   
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR----------- 201
           A RL   M + G+ P+  T++V +D LCK G+++EA  L D +   GV+           
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517

Query: 202 ------------------------PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
                                   P+++TYN L++G C   ++  A  L   M +MG K 
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           TV +Y+ILI    K+   + AL +++ M+S G +PDV  +       F    +E    + 
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637

Query: 298 DEMQRNGVAADTWTY--------------RTF------IDGLCKNG-YIVE--------- 327
            +M   G+  D  TY              R F      +D  CK   YIV          
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697

Query: 328 ----------------------------------AVELFHTLRILKCEFDIRAYNSLIDG 353
                                             A++LF  +    C  D+  Y +LI G
Sbjct: 698 NRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 757

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            C+  RLE A  L   +    + P+   Y+ ++   C  G   +A  L   M EN ++P 
Sbjct: 758 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 817

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           + ++ +L+ G        K   + H +       D     +++D L K ++
Sbjct: 818 LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDL 868



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 22/257 (8%)

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G KH V SYS ++N   + + +  A  +   M    IK    I + LFV           
Sbjct: 96  GFKHNVHSYSSMLNILIRARLLGVAEKIRISM----IKSCCSIEDVLFV----------- 140

Query: 294 FKLFDEMQRNG---VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
            ++F +M  +G          Y T +  L K   I E   ++  L   +   +I  +N++
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 351 IDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++G CK G + +  EL+ S +    L P+  TY+ +I G C +  +D A ++FL M +  
Sbjct: 201 VNGYCKIGNV-VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
              N +++  LI G       ++ ++L   M E N  P     ++++  L+ +   + +L
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 470 PSFTVHEQQEEVDESNV 486
             F  +E +E+  E NV
Sbjct: 320 NLF--NEMKEKGCEPNV 334


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 146/391 (37%), Positives = 229/391 (58%), Gaps = 9/391 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  ++  +I  LC  SR + A ++  K+  FG EPDV T ++L+NG C+ +    A++L 
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M     E G    P+ V Y TIIDG CK G V+ A EL  +M+   ++ + VTY S++
Sbjct: 163 SKME----EMGF--RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +  W++A RL  +M+ + + PNV+TF  ++D   K GK  EA +L + M +  V 
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD FTYN+L++G C+ GRV+ AK++   M + GC   V +Y+ LING+CK+K ++    L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EM  +G+  D + +NT+  G F+  + + A ++F  M       +  TY   + GLC 
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 393

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           N  + +A+ LF  ++  + E DI  YN +I G+CK G +E A +LFRSL C  L P+VV+
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           Y+ MI G C   Q DK+  L+  M+E+ ++P
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 237/435 (54%), Gaps = 9/435 (2%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++++S   P  V F+ ++  +          +LF  + V G   D+++Y  ++N LCR S
Sbjct: 59  KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
             ++AL++  +M     +FG   EP+ VT +++I+G C+   V  A +L+ +M++   +P
Sbjct: 119 RFVIALSVVGKMM----KFGY--EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +VV Y ++I G C     N+A  LF  M   GV+ + VT+N ++  LC +G+  +A+RL+
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+   + P+  T+  ++D F   G+ + A +L+  M        VF+Y+ LING C +
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             ++ A  +   M++KG  PDVV +NTL  G  +  +V+   KLF EM + G+  DT TY
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I G  + G    A E+F  +       +IR Y+ L+ GLC + R+E AL LF ++  
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             +  ++ TY+I+I G+C  G ++ A DLF  +    + P+V+++  +I GF R  +  K
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469

Query: 433 VIELLHKMKEINVMP 447
              L  KM+E  ++P
Sbjct: 470 SDLLYRKMQEDGLLP 484



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 209/368 (56%), Gaps = 9/368 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V+G+++K  + PD VT +SLI G C  +R+ +A  L +K+   G  PDV  Y T+++G C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A+ LF+ M       GV    + VTY +++ GLC  G    A  L+  M  ++
Sbjct: 186 KIGLVNDAVELFDRMERD----GV--RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I PNV+T+T+VI  F     ++EA +L+ EM  + V P+V T+N +++ LC +G++DEA 
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           ++LDLM+  G  PD  TYNTL++GFC + RV+   +LF  M   G      +Y+ +I GY
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +    + A  ++S M S   +P++  ++ L  GL    +VE+A  LF+ MQ++ +  D 
Sbjct: 360 FQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I G+CK G + +A +LF +L     + D+ +Y ++I G C+  + + +  L+R 
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476

Query: 370 LPCGVLVP 377
           +    L+P
Sbjct: 477 MQEDGLLP 484



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 170/319 (53%), Gaps = 9/319 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     ++ ++ +  F PD V + ++I G C    + +A  LF ++   G   D  TY 
Sbjct: 154 RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN 213

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +LV GLC +     A  L  +M   +        PN +T+T +ID   KEG   +A +L 
Sbjct: 214 SLVAGLCCSGRWSDAARLMRDMVMRD------IVPNVITFTAVIDVFVKEGKFSEAMKLY 267

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  + + P+V TY S+I G C     +EAK++   M+ +G  P+VVT+N +++  CK+
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DE ++L   M Q G+  D  TYNT++ G+   GR + A+E+F  M+S   +  + +Y
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTY 384

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           SIL+ G C N  +E AL L+  M    I+ D+  +N +  G+ +I  VE A+ LF  +  
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444

Query: 303 NGVAADTWTYRTFIDGLCK 321
            G+  D  +Y T I G C+
Sbjct: 445 KGLKPDVVSYTTMISGFCR 463



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 165/305 (54%), Gaps = 9/305 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V+    +  R+ +     DAVT+ SL+ GLC   R  +AA L   + +    P+V T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T +++   +      A+ L+EEM           +P+  TY ++I+GLC  G VD+AK+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRR------CVDPDVFTYNSLINGLCMHGRVDEAKQ 300

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  M  K   P+VVTY ++I GFC +K  +E  +LF EM  +G+  + +T+N I+    
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+ D A  +   M     RP+  TY+ LL G C+  RV  A  LF +M+    +  + 
Sbjct: 361 QAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+I+I+G CK   +E A  L+  +  KG+KPDVV + T+  G     Q +++  L+ +M
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477

Query: 301 QRNGV 305
           Q +G+
Sbjct: 478 QEDGL 482



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 185/365 (50%), Gaps = 3/365 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ V ++ ++  + K    D    L   M+   I  ++ +Y  VI   C    +  A  +
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +MM  G +P+VVT + +++  C+  ++ +A  L+  M + G RPD   YNT++DG C 
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G VN A ELF  ME  G +    +Y+ L+ G C +     A  L  +M+ + I P+V+ 
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
              +     +  +   A KL++EM R  V  D +TY + I+GLC +G + EA ++   + 
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C  D+  YN+LI+G CKS R++   +LFR +    LV + +TY+ +I G    G+ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A+++F  M+     PN+ T+ +L+ G        K + L   M++  +  D +  +IV+
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423

Query: 457 DLLAK 461
             + K
Sbjct: 424 HGMCK 428



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 184/360 (51%), Gaps = 3/360 (0%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L  +M      P++V ++ V+     +K+++    LF  M   G+  ++ ++N++++ L
Sbjct: 55  DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+  +   A  ++  M++ G  PD  T ++L++GFC   RV  A +L   ME MG +  V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+ +I+G CK   +  A+ L+  M   G++ D V +N+L  GL    +   A +L  +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M    +  +  T+   ID   K G   EA++L+  +     + D+  YNSLI+GLC  GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A ++   +     +P+VVTY+ +I G C   ++D+   LF +M +  +V + IT++ 
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           +I+G+ +   P    E+  +M   +  P+    SI++  L  N     +L  F   ++ E
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 144/271 (53%), Gaps = 9/271 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    ++  ++     P+ +TFT++I     E +  EA  L+ ++     +PDVFTY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC       A  + + M          C P+ VTY T+I+G CK   VD+  +L
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKG------CLPDVVTYNTLINGFCKSKRVDEGTKL 336

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  + +TY ++I+G+  A   + A+ +F  M     +PN+ T+++++  LC 
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCM 393

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N ++++A  L + M +  +  D  TYN ++ G C  G V  A +LF S+   G K  V S
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           Y+ +I+G+C+ ++ + +  LY +M   G+ P
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 6/282 (2%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           ++E   L   MIQ    P    ++ +L     +   +    LF  ME  G  H ++SY+I
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +IN  C+      ALS+  +M+  G +PDVV  ++L  G  + ++V  A  L  +M+  G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D   Y T IDG CK G + +AVELF  +       D   YNSL+ GLC SGR   A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            L R +    +VPNV+T++ +I     +G+  +A  L+ +M    V P+V T++ LI G 
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 425 I---RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
               R++E  ++++L   M     +PD    + +++   K++
Sbjct: 290 CMHGRVDEAKQMLDL---MVTKGCLPDVVTYNTLINGFCKSK 328


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 148/436 (33%), Positives = 239/436 (54%), Gaps = 6/436 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
            +L +  +P+  TF +++ G C    ++EA    +K+   G  PD FTYT+L+ G CR  
Sbjct: 184 ELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNK 243

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A  +F  M          C+ N V+YT +I GLC+ G +++A +L   M + N  P
Sbjct: 244 GVDNAYEVFLIMPQKG------CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCP 297

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            V TYT +I     +    EA  LF EM ++G +PNV T+ V++D LCK  KMDEA ++L
Sbjct: 298 TVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKML 357

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M + G+ P   TYN L+DG+C  G ++ A E+   MES  C     +Y+ LI G CK 
Sbjct: 358 SEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKK 417

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           +++  A++L ++ML + + P ++ +N+L  G  +++ +E A++L   M  NG+  D WTY
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
             FID LCK G + EA  LF +++    + +   Y +LIDG CK G++++A  L   +  
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
              +PN  TY+++I GLC + +M +A  L   M    V P V+T+ +LI   ++      
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597

Query: 433 VIELLHKMKEINVMPD 448
            +++ + M  +   PD
Sbjct: 598 ALKVFNHMVSLGYQPD 613



 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 242/463 (52%), Gaps = 14/463 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + V++T+LI GLC   RI EA  LF  +    C P V TYT L+  L  +   + ALNLF
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM          CEPN  TYT +IDGLCKE  +D+A+++L +M +K + P+VVTY ++I
Sbjct: 323 NEMKEKG------CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C     ++A  +   M      PN  T+N ++  LCK  K+ +A  LL+ M++  + 
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P   TYN+L+ G C    +  A  L   M   G     ++YS+ I+  CK   +E A +L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  + +KG+K + VI+  L  G  ++ +++ A+ L + M  +    +++TY   I+GLCK
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
              + EA  L   +  +  +  +  Y  LI  + K G  + AL++F  +      P+V T
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+  +    + G +++  D+   M E  ++P+++T+ +LI G+ R+    +  + L  M 
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676

Query: 442 EINVMPDASIVSIVVDLLA--------KNEISLNSLPSFTVHE 476
           +    P   IVSI++  L+        ++EI ++S+ +   +E
Sbjct: 677 DTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYE 719



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/580 (25%), Positives = 246/580 (42%), Gaps = 117/580 (20%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++    +   + +    P   T+T LI  L    R +EA  LF +++  GCEP+V TY
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVV------------ 94
           T L++GLC+ +    A  +  EM+               +G  + G++            
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397

Query: 95  --CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
             C PNT TY  +I GLCK+  V KA  LL +M ++ + P+++TY S+I G C   D   
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A RL   M + G+ P+  T++V +D LCK G+++EA  L D +   GV+ +   Y  L+D
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C  G+++ A  L   M +  C    ++Y++LI G CK K+++ A SL ++ML+ G+KP
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFD---------------------------------- 298
            VV +  L   + +    + A K+F+                                  
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637

Query: 299 -EMQRNGVAADTWTYRTFIDGLCKNG---------------------YIVE--------- 327
            +M   G+  D  TY   IDG  + G                     YIV          
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697

Query: 328 -----------------------AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
                                  A++LF  +    C  D+  Y +LI G C+  RLE A 
Sbjct: 698 NRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQ 757

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            L   +    + P+   Y+ ++   C  G   +A  L   M EN ++P + ++ +L+ G 
Sbjct: 758 GLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 817

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
                  K   + H +       D     +++D L K ++
Sbjct: 818 YIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDL 857



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 220/439 (50%), Gaps = 9/439 (2%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRV---FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           S+IK  C+   ++    +F K+     F  +P +  Y T++  L +         ++ E+
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            N          PN  T+  +++G CK G V +A+    ++    + P+  TYTS+I G 
Sbjct: 186 LNNQ------ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGH 239

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C  K  + A  +F+ M  +G Q N V++  ++  LC+ G+++EA +L   M +    P  
Sbjct: 240 CRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  L+     +GR   A  LF  M+  GC+  V +Y++LI+G CK  +++ A  + SE
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  KG+ P VV +N L  G  +   ++ AF++ D M+ N    +T TY   I GLCK   
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + +A+ L + +   K    +  YNSLI G CK   LE A  L   +    LVP+  TYS+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
            I  LC +G++++A  LF  ++   V  N + +  LI G+ ++ +      LL +M    
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 445 VMPDASIVSIVVDLLAKNE 463
            +P++   +++++ L K +
Sbjct: 540 CLPNSYTYNVLIEGLCKEK 558



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 224/478 (46%), Gaps = 26/478 (5%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V     +L ++L+   +P  +T+ SLI G C  + +  A  L + +   G  PD +TY+
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ LC+      A  LF+ + A G        + N V YT +IDG CK G +D A  L
Sbjct: 479 VFIDTLCKEGRVEEAGTLFDSVKAKG-------VKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +    PN  TY  +I G C  K   EA  L  +M+  GV+P VVT+ +++ E+ K
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G  D A ++ + M+  G +PD  TY   L  +   G +    ++   M   G    + +
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF---------------VGLFE 286
           Y++LI+GY +      A      M+  G KP + I + L                +G+  
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDS 711

Query: 287 IH---QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           +    + E A KLF++M  +G   D   Y   I G C+   + EA  L H ++       
Sbjct: 712 VSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS 771

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              YNSL+D  CK G    A+ L  ++    L+P + +Y +++ GL  +G  +KA+ +F 
Sbjct: 772 EDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFH 831

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +       + + + +LI G ++ +   +  EL+  M+E    P+    S++++ L +
Sbjct: 832 GLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 174/372 (46%), Gaps = 24/372 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   + +L R+L     P++ T+  LI+GLC E ++ EA++L  K+   G +P V T
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+  + +      AL +F  M +     G   +P+  TYT  +     +G +++  +
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVS----LGY--QPDVCTYTAFLHAYFSQGMLEEVDD 635

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++ +M ++ I P++VTYT +I G+      + A      M+D G +P++   ++++  L 
Sbjct: 636 VIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLS 695

Query: 181 KNGKMDE------------------ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
              +M E                  A +L + M++HG   D   Y  L+ GFC   R+  
Sbjct: 696 HENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEE 755

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
           A+ L   M+  G   +   Y+ L++  CK      A+ L   M+  G+ P +  +  L  
Sbjct: 756 AQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVC 815

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
           GL+     E+A  +F  +   G   D   ++  IDGL K   + E  EL   +    C+ 
Sbjct: 816 GLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQP 875

Query: 343 DIRAYNSLIDGL 354
           +   Y+ LI+GL
Sbjct: 876 NPLTYSLLIEGL 887



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 22/257 (8%)

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G KH V SYS ++N   + + +  A  +   M    IK    I + LFV           
Sbjct: 96  GFKHNVHSYSSMLNILIRARLLGVAEKIRISM----IKSCCSIEDVLFV----------- 140

Query: 294 FKLFDEMQRNG---VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
            ++F +M  +G          Y T +  L K   I E   ++  L   +   +I  +N++
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 351 IDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++G CK G + +  EL+ S +    L P+  TY+ +I G C +  +D A ++FL M +  
Sbjct: 201 VNGYCKIGNV-VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
              N +++  LI G       ++ ++L   M E N  P     ++++  L+ +   + +L
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 470 PSFTVHEQQEEVDESNV 486
             F  +E +E+  E NV
Sbjct: 320 NLF--NEMKEKGCEPNV 334


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  281 bits (719), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 152/435 (34%), Positives = 242/435 (55%), Gaps = 9/435 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P  VT+++LI GLC +  + +   L  ++   GC P+  TY TLVN L     +  A 
Sbjct: 97  FRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAF 156

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM--KDKNIKPNVVT 136
           +L E+MA  NG     C P  +T+  II GLCKEG ++ A  ++ +M   +  + P+V+T
Sbjct: 157 SLLEQMA-ANG-----CPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVIT 210

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           + SV+ G C  +   +A  +F   +++G +PNVVT++ ++D L K  KMDEA +LL  M+
Sbjct: 211 FNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 270

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G R +  TY+T++DG    GR+  A  +   M   GC     +Y+ LI+G+ K + + 
Sbjct: 271 ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR 330

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+ L  EML  G  P VV + TL  GL    + + A ++ D M   G A +  TY + +
Sbjct: 331 EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 390

Query: 317 DGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           DGLCK G + EA+  F  + R       + AY++LIDGLCK+G+++ A E    +     
Sbjct: 391 DGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGR 450

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           +P+VVT+SI+I GLC+ G++D   +LF  M E   VP+++T+  L+    R +   +  +
Sbjct: 451 IPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFD 510

Query: 436 LLHKMKEINVMPDAS 450
           L  +M+   + PD S
Sbjct: 511 LFQQMRSDGLSPDRS 525



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 159/497 (31%), Positives = 250/497 (50%), Gaps = 43/497 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V     +  +++     PD VT+ +LI GL  + R+ EA  LF + R  GC P V TY 
Sbjct: 10  KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYN 69

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+++GLC+      AL L+++MA     FG    P  VTY+T+IDGLC++  VDK  +LL
Sbjct: 70  TMIDGLCKCGRIENALTLYDDMAI---HFGF--RPTVVTYSTLIDGLCRDHEVDKGCKLL 124

Query: 123 LQMKDKNIKPNVVTYTS-----------------------------------VIRGFCYA 147
            +M  +   PN VTY +                                   +I+G C  
Sbjct: 125 EEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKE 184

Query: 148 KDWNEAKRLFIE--MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            +   A R+  E  M++ G+ P+V+TFN ++D LCK  ++ +A  +    ++ G RP+  
Sbjct: 185 GEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVV 244

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TY+TL+DG     +++ A +L   M  +GC+    +YS +++G  K   +E A+ +  +M
Sbjct: 245 TYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQM 304

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
              G  PD V +NTL  G F+  ++  A  L  EM   G      TY T   GLC++G  
Sbjct: 305 RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRF 364

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG-VLVPNVVTYSI 384
            EAVE+   +    C  +   Y+S++DGLCK+GR+  AL  F  +    V+ P+V+ YS 
Sbjct: 365 DEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSA 424

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I GLC  G++D+A +    M     +P+V+TF +LI G          +EL   M E  
Sbjct: 425 LIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERG 484

Query: 445 VMPDASIVSIVVDLLAK 461
            +PD    + +VD L +
Sbjct: 485 CVPDMVTYATLVDRLCR 501



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 207/391 (52%), Gaps = 9/391 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF--GCEPDVF 59
           GR    F +L ++  +   P+ +TF  +IKGLC E  I  A  +  ++ +   G  PDV 
Sbjct: 150 GRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVI 209

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           T+ ++++GLC+    + A N+F+       E G  C PN VTY+T+IDGL K   +D+A 
Sbjct: 210 TFNSVLDGLCKEQRILDAHNVFKRAL----ERG--CRPNVVTYSTLIDGLSKMAKMDEAL 263

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +LL +M +   + N VTY++V+ G        +A  +  +M D G  P+ VT+N ++D  
Sbjct: 264 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 323

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K  ++ EA  LL  M++ G  P   TY TL  G C +GR + A E+   M + GC    
Sbjct: 324 FKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNA 383

Query: 240 FSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            +YS +++G CK   +  AL  + +M   + + P V+ ++ L  GL +  +++ A++  +
Sbjct: 384 ITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLE 443

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M R G   D  T+   I+GLC  G I   +ELF  +    C  D+  Y +L+D LC++ 
Sbjct: 444 RMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRAS 503

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           R++ A +LF+ +    L P+  T   MI GL
Sbjct: 504 RVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/421 (31%), Positives = 214/421 (50%), Gaps = 9/421 (2%)

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           +++GLC++     A+ LF++M +          P+ VTY  +IDGL K+  V +A +L  
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDK------AIYPDVVTYGALIDGLGKQRRVKEAYDLFE 54

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKN 182
           + + K   P VVTY ++I G C       A  L+ +M    G +P VVT++ ++D LC++
Sbjct: 55  EARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRD 114

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++D+  +LL+ M   G  P+A TYNTL++     GR   A  L   M + GC   + ++
Sbjct: 115 HEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITF 174

Query: 243 SILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            ++I G CK  EIE A  +  EM  +  G+ PDV+  N++  GL +  ++  A  +F   
Sbjct: 175 GLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA 234

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   +  TY T IDGL K   + EA++L   +  L C  +   Y++++DGL K GR+
Sbjct: 235 LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 294

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A+ + R +     +P+ VTY+ +I G     ++ +A  L  +M E    P+V+T+  L
Sbjct: 295 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 354

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
             G  R     + +E+L  M      P+A   S +VD L K      +L  F    + E 
Sbjct: 355 CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 414

Query: 481 V 481
           V
Sbjct: 415 V 415



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 166/300 (55%), Gaps = 7/300 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M ++     +L ++++     + VT+++++ GL    R+ +A  +  ++R  GC PD  T
Sbjct: 256 MAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVT 315

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G  +      A+ L  EM     E G    P+ VTYTT+  GLC+ G  D+A E
Sbjct: 316 YNTLIDGFFKRQRLREAVGLLREML----EAGF--HPSVVTYTTLCHGLCRSGRFDEAVE 369

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDEL 179
           +L  M  +   PN +TY+S++ G C A    EA   F +M  D+ V P+V+ ++ ++D L
Sbjct: 370 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 429

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK GK+DEA   L+ MI+ G  PD  T++ L++G C  GR++   ELF  M   GC   +
Sbjct: 430 CKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDM 489

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ L++  C+   ++ A  L+ +M S G+ PD     T+  GL E+++ E A ++ DE
Sbjct: 490 VTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  281 bits (719), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 162/440 (36%), Positives = 239/440 (54%), Gaps = 24/440 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F VL +ILK  + PD +T T+LIKGLC   ++ EA      +   G   +  +
Sbjct: 96  LGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVS 155

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+NGLC+   T  AL +  ++       G +   N V Y+TIID LCKE  V +A E
Sbjct: 156 YGILINGLCKMGETRAALQVLRKID------GKLVNTNVVMYSTIIDSLCKEKLVTEAYE 209

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  QM  K + P+VVT++++I GFC    + EA  LF EM+   + P+V TFN+++D LC
Sbjct: 210 LYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALC 269

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G   E   +L +M++                     +VN AK +F  +        V 
Sbjct: 270 KEGSTKETKNVLAVMMKE------------------VNQVNKAKHVFNIIGKRRVTPDVH 311

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+I   CK K ++ ALSL++EM  KGI PD V +++L  GL +  ++  A++L D+M
Sbjct: 312 SYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQM 371

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G  AD  TY +F+  LCKN  + +AV L   ++    + +I  YN LIDGLCK GR 
Sbjct: 372 HARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRF 431

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A  +F+ L        V TY+IMI GLC +G  D+A  L   ME+N   P+V+T++ +
Sbjct: 432 ENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETI 491

Query: 421 IRGFIRINEPSKVIELLHKM 440
           IR   + +E  K  +LL +M
Sbjct: 492 IRALFKNDENHKAEKLLREM 511



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 167/313 (53%), Gaps = 11/313 (3%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V+  + +  +++    +PD VTF++LI G C   +  EA  LF ++ +    PDV T+  
Sbjct: 204 VTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNI 263

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGE-------FGVVCE----PNTVTYTTIIDGLCKE 112
           LV+ LC+   T    N+   M     +       F ++ +    P+  +YT II  LCK 
Sbjct: 264 LVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKI 323

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
             VD+A  L  +M+ K I P+ VTY+S+I G C ++  + A  L  +M  +G   +V+T+
Sbjct: 324 KMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITY 383

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
              +  LCKN ++D+A  L+  +   G++P+  TYN L+DG C  GR  +A+ +F  +  
Sbjct: 384 TSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLI 443

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G K TV++Y+I+ING C     + A++L  +M   G  PDVV + T+   LF+  +  +
Sbjct: 444 KGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHK 503

Query: 293 AFKLFDEMQRNGV 305
           A KL  EM   G+
Sbjct: 504 AEKLLREMIARGL 516



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 176/401 (43%), Gaps = 54/401 (13%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE--AKRLFIEMMDQGVQPNVVTF 172
           V  A     +M   N  P+++ +  ++     + + N   A  L+  +    + P++VTF
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N +++  C  G+MD A  +L  +++ G  PD  T  TL+ G CL G+V+ A      + +
Sbjct: 87  NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIA 146

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALS-------------------------------- 260
            G +    SY ILING CK  E   AL                                 
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTE 206

Query: 261 ---LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
              LYS+M+ K + PDVV  + L  G   + Q + AF LF EM    +  D  T+   +D
Sbjct: 207 AYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266

Query: 318 GLCKNGYIVE-----------------AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            LCK G   E                 A  +F+ +   +   D+ +Y  +I  LCK   +
Sbjct: 267 ALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMV 326

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + AL LF  + C  + P+ VTYS +I GLC   ++  A +L   M       +VIT+   
Sbjct: 327 DEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSF 386

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +    + ++  K + L+ K+K+  + P+ +  +I++D L K
Sbjct: 387 LHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCK 427



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 144/287 (50%), Gaps = 23/287 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAE-----------------SRIMEAA 43
           +G+    F +   ++ +   PD  TF  L+  LC E                 +++ +A 
Sbjct: 236 VGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAK 295

Query: 44  ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
            +F  +      PDV +YT ++  LC+      AL+LF EM       G+   P+ VTY+
Sbjct: 296 HVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCK----GIT--PDKVTYS 349

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           ++IDGLCK   +  A ELL QM  +    +V+TYTS +   C     ++A  L  ++ DQ
Sbjct: 350 SLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQ 409

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G+QPN+ T+N+++D LCK G+ + A  +   ++  G +   +TYN +++G CL G  + A
Sbjct: 410 GIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEA 469

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
             L   ME  GC   V +Y  +I    KN E   A  L  EM+++G+
Sbjct: 470 MTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/542 (30%), Positives = 270/542 (49%), Gaps = 75/542 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+ FT L+KGLCA+ R  +A  +   ++   GC P+VF+
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC  + +  AL L + M +  G+    C P+ V+YTT+I+G  KEG +DKA  
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I PNVVTY+S+I   C A+  ++A  +   M+  GV PN  T+N I+   C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G+  EA   L  M   GV PD  TYN+L+D  C  GR   A+++F SM   G K  + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 241 SY-----------------------------------SILINGYCKNKEIEGALSLYSEM 265
           +Y                                   SILI  Y K  +++ A+ ++S+M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD--------------------------- 298
             +G+ PD V + T+   L +  +VE A + F+                           
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 299 --------EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
                   EM   G+  DT  + + ID  CK G ++E+ +LF  +  +  + DI  Y++L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           IDG C +G+++ A +L  S+    + P+ VTY+ +I G C   +M+ A  LF +ME + V
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            P++IT++++++G  +    +   EL   + E     + S  +I++  L KN ++  +L 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 471 SF 472
            F
Sbjct: 641 MF 642



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/470 (34%), Positives = 253/470 (53%), Gaps = 31/470 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ SL+  LC   R  EA  +F  +   G +P++ TY TL+ G   T   +V ++ 
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHG 360

Query: 81  FEEMANGNG------EFGV-VC-----------------------EPNTVTYTTIIDGLC 110
             ++   NG       F + +C                        P+TVTY T+I  LC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G V+ A     QM D+ + P  + Y S+I   C    W++AK L +EM+D+G+  + +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN I+D  CK G++ E+ +L DLM++ GV+PD  TY+TL+DG+CL G+++ A +L  SM
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G K    +Y+ LINGYCK   +E AL L+ EM S G+ PD++ +N +  GLF+  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L+  +  +G   +  TY   + GLCKN    EA+ +F  L +   + + R +N +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I  L K GR + A +LF +L    LVP+V TYS+M   L   G +++  DLFL MEEN  
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
             N    + ++R  ++  + ++    L  + E +   +AS  S+ +DLL+
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLS 770



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 201/455 (44%), Gaps = 42/455 (9%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  +F +L   G    ++     +  + R S    A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  +I   C  G +D     L  +  K  + + + +T +++G C  K  ++A  + +  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 161 MDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLT 217
           M Q G  PNV ++N+++  LC   +  EA  LL +M   G    PD  +Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G ++ A   +  M   G    V +YS +I   CK + ++ A+ + + M+  G+ P+   +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++  G     Q + A     +M  +GV  D  TY + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 338 LKCEFDIRAYNSLIDG--------------------------------LC---KSGRLEI 362
              + +I  Y +L+ G                                +C   K G+++ 
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+ +F  +    L P+ VTY  +IG LC  G+++ A   F  M +  + P  I ++ LI 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
                ++  K  EL+ +M +  +  D    + ++D
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 145/303 (47%), Gaps = 6/303 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D + F S+I   C E R++E+  LF  +   G +PD+ TY+TL++G C       A  L 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M +      V  +P+ VTY T+I+G CK   ++ A  L  +M+   + P+++TY  ++
Sbjct: 538 ASMVS------VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G    +    AK L++ + + G Q  + T+N+I+  LCKN   DEA R+   +    ++
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +  T+N ++      GR + AK+LF ++ + G    V +YS++     +   +E    L
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M   G   +  + N++   L +   + RA      +     + +  T   F+D L  
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771

Query: 322 NGY 324
             Y
Sbjct: 772 GKY 774



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+  +   G + ++ T
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+ + T  AL +F+ +   + +        T T+  +I  L K G  D+AK+
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKVGRNDEAKD 675

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   +    + P+V TY+ +           E   LF+ M + G   N    N I+ +L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           + G +  A   L ++ +     +A T +  LD
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 149/443 (33%), Positives = 246/443 (55%), Gaps = 8/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V++ ++I GLC E R+ +A  L  ++    CEP+ FTY  L++GLC+      A+ L
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM     E  V      V Y+T+I G C +G +D+ K L  +M +K I PNVV Y+ +
Sbjct: 68  LGEMKRKGLEVDV------VVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC    W EA  +   M ++G+QP+V T+  ++  LCK+G+  +A  L DLM + G 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P   TYN L++G C  G +  A ++F +M   G +  V SY+ LI G C N +++ A+ 
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 261 LYSEMLSKG--IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+S +L  G  ++PDV+  NT+  GL +  ++++A +++D M   G   + +T    I  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             K+G I +A+EL+  +  L        Y+ +IDG CK   L  A  LF  +    L P 
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +  Y+ ++  LC +  +++AR LF +M+E+   P+ I+F+++I G ++  +     ELL+
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
            M+++ + PDA   S  ++ L+K
Sbjct: 422 DMQQMGLTPDAYTYSSFINRLSK 444



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 252/477 (52%), Gaps = 11/477 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +LG + +     D V +++LI G C++  +    ALF ++   G  P+V  Y
Sbjct: 59  GRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVY 118

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+NG C+      A  +   M     E G+  +P+  TYT +I GLCK+G   KA +L
Sbjct: 119 SCLINGFCKKGLWREATAVLHTMT----ERGI--QPDVYTYTCMIGGLCKDGRARKALDL 172

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M +K  +P+ VTY  +I G C      +A ++F  M+++G +  VV++N ++  LC 
Sbjct: 173 FDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCN 232

Query: 182 NGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           NGK+DEA +L   +++ G  V PD  T+NT++ G C  GR++ A E++ +M   G    +
Sbjct: 233 NGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNL 292

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           F+  ILI  Y K+  I+ A+ L+  +   G+ P    ++ +  G  ++H +  A  LF  
Sbjct: 293 FTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSR 352

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+ +G++   + Y T +  LCK   + +A  LF  ++   CE D  ++N +IDG  K+G 
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGD 412

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A EL   +    L P+  TYS  I  L   GQM++A+  F  M  + + P+   +D 
Sbjct: 413 IHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDS 472

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS---LPSFT 473
           LI+GF   +E  +VI LL +M ++ V+ D  I + ++  L  +   L+    LP+F+
Sbjct: 473 LIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFS 529



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/339 (35%), Positives = 192/339 (56%), Gaps = 2/339 (0%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           MK  NI P++V+Y ++I G C  K   +A  L +EM     +PN  T+ ++MD LCK G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           ++EA RLL  M + G+  D   Y+TL+ GFC  G ++  K LF  M   G    V  YS 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LING+CK      A ++   M  +GI+PDV  +  +  GL +  +  +A  LFD M   G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
               T TY   I+GLCK G I +A ++F T+       ++ +YN+LI GLC +G+L+ A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 365 ELFRSL--PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           +LF SL      + P+V+T++ +I GLC +G++DKA +++  M E     N+ T  +LI 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +I+     K +EL  ++ ++ ++P ++  S+++D   K
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCK 339



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 6/240 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +  R+ K    P + T++ +I G C    +  A  LF+++++ G  P +F Y
Sbjct: 306 GIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDY 365

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  LC+ S    A  LF+EM   N      CEP+T+++  +IDG  K G +  AKEL
Sbjct: 366 NTLMASLCKESSLEQARRLFQEMKESN------CEPDTISFNIMIDGTLKAGDIHSAKEL 419

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+   + P+  TY+S I          EAK  F  M+  G+ P+   ++ ++     
Sbjct: 420 LNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGL 479

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N +++E   LL  M   GV  D    N++L   C +    H  EL  +  S     T  S
Sbjct: 480 NDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSIS 539



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 95/181 (52%)

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+R  +  D  +Y T I+GLCK   + +AV+L   +    CE +   Y  L+DGLCK GR
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +E A+ L   +    L  +VV YS +I G C+ G +D+ + LF +M E  + PNV+ +  
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           LI GF +     +   +LH M E  + PD    + ++  L K+  +  +L  F +  ++ 
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 480 E 480
           E
Sbjct: 181 E 181


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/542 (30%), Positives = 270/542 (49%), Gaps = 75/542 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+ FT L+KGLCA+ R  +A  +   ++   GC P+VF+
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC  + +  AL L + M +  G+    C P+ V+YTT+I+G  KEG +DKA  
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I PNVVTY+S+I   C A+  ++A  +   M+  GV PN  T+N I+   C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G+  EA   L  M   GV PD  TYN+L+D  C  GR   A+++F SM   G K  + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 241 SY-----------------------------------SILINGYCKNKEIEGALSLYSEM 265
           +Y                                   SILI  Y K  +++ A+ ++S+M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD--------------------------- 298
             +G+ PD V + T+   L +  +VE A + F+                           
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 299 --------EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
                   EM   G+  DT  + + ID  CK G ++E+ +LF  +  +  + DI  Y++L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           IDG C +G+++ A +L  S+    + P+ VTY+ +I G C   +M+ A  LF +ME + V
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            P++IT++++++G  +    +   EL   + E     + S  +I++  L KN ++  +L 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 471 SF 472
            F
Sbjct: 641 MF 642



 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/470 (34%), Positives = 253/470 (53%), Gaps = 31/470 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ SL+  LC   R  EA  +F  +   G +P++ TY TL+ G   T   +V ++ 
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHG 360

Query: 81  FEEMANGNG------EFGV-VC-----------------------EPNTVTYTTIIDGLC 110
             ++   NG       F + +C                        P+TVTY T+I  LC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G V+ A     QM D+ + P  + Y S+I   C    W++AK L +EM+D+G+  + +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN I+D  CK G++ E+ +L DLM++ GV+PD  TY+TL+DG+CL G+++ A +L  SM
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G K    +Y+ LINGYCK   +E AL L+ EM S G+ PD++ +N +  GLF+  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L+  +  +G   +  TY   + GLCKN    EA+ +F  L +   + + R +N +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I  L K GR + A +LF +L    LVP+V TYS+M   L   G +++  DLFL MEEN  
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
             N    + ++R  ++  + ++    L  + E +   +AS  S+ +DLL+
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLS 770



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 201/455 (44%), Gaps = 42/455 (9%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  +F +L   G    ++     +  + R S    A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  +I   C  G +D     L  +  K  + + + +T +++G C  K  ++A  + +  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 161 MDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLT 217
           M Q G  PNV ++N+++  LC   +  EA  LL +M   G    PD  +Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G ++ A   +  M   G    V +YS +I   CK + ++ A+ + + M+  G+ P+   +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++  G     Q + A     +M  +GV  D  TY + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 338 LKCEFDIRAYNSLIDG--------------------------------LC---KSGRLEI 362
              + +I  Y +L+ G                                +C   K G+++ 
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+ +F  +    L P+ VTY  +IG LC  G+++ A   F  M +  + P  I ++ LI 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
                ++  K  EL+ +M +  +  D    + ++D
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 145/303 (47%), Gaps = 6/303 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D + F S+I   C E R++E+  LF  +   G +PD+ TY+TL++G C       A  L 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M +      V  +P+ VTY T+I+G CK   ++ A  L  +M+   + P+++TY  ++
Sbjct: 538 ASMVS------VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G    +    AK L++ + + G Q  + T+N+I+  LCKN   DEA R+   +    ++
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +  T+N ++      GR + AK+LF ++ + G    V +YS++     +   +E    L
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M   G   +  + N++   L +   + RA      +     + +  T   F+D L  
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771

Query: 322 NGY 324
             Y
Sbjct: 772 GKY 774



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+  +   G + ++ T
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+ + T  AL +F+ +   + +        T T+  +I  L K G  D+AK+
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKVGRNDEAKD 675

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   +    + P+V TY+ +           E   LF+ M + G   N    N I+ +L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           + G +  A   L ++ +     +A T +  LD
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/542 (30%), Positives = 270/542 (49%), Gaps = 75/542 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+ FT L+KGLCA+ R  +A  +   ++   GC P+VF+
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC  + +  AL L + M +  G+    C P+ V+YTT+I+G  KEG +DKA  
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I PNVVTY+S+I   C A+  ++A  +   M+  GV PN  T+N I+   C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G+  EA   L  M   GV PD  TYN+L+D  C  GR   A+++F SM   G K  + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 241 SY-----------------------------------SILINGYCKNKEIEGALSLYSEM 265
           +Y                                   SILI  Y K  +++ A+ ++S+M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD--------------------------- 298
             +G+ PD V + T+   L +  +VE A + F+                           
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 299 --------EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
                   EM   G+  DT  + + ID  CK G ++E+ +LF  +  +  + DI  Y++L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           IDG C +G+++ A +L  S+    + P+ VTY+ +I G C   +M+ A  LF +ME + V
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            P++IT++++++G  +    +   EL   + E     + S  +I++  L KN ++  +L 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 471 SF 472
            F
Sbjct: 641 MF 642



 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/470 (34%), Positives = 253/470 (53%), Gaps = 31/470 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ SL+  LC   R  EA  +F  +   G +P++ TY TL+ G   T   +V ++ 
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHG 360

Query: 81  FEEMANGNG------EFGV-VC-----------------------EPNTVTYTTIIDGLC 110
             ++   NG       F + +C                        P+TVTY T+I  LC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G V+ A     QM D+ + P  + Y S+I   C    W++AK L +EM+D+G+  + +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN I+D  CK G++ E+ +L DLM++ GV+PD  TY+TL+DG+CL G+++ A +L  SM
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G K    +Y+ LINGYCK   +E AL L+ EM S G+ PD++ +N +  GLF+  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L+  +  +G   +  TY   + GLCKN    EA+ +F  L +   + + R +N +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I  L K GR + A +LF +L    LVP+V TYS+M   L   G +++  DLFL MEEN  
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
             N    + ++R  ++  + ++    L  + E +   +AS  S+ +DLL+
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLS 770



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 201/455 (44%), Gaps = 42/455 (9%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  +F +L   G    ++     +  + R S    A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  +I   C  G +D     L  +  K  + + + +T +++G C  K  ++A  + +  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 161 MDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLT 217
           M Q G  PNV ++N+++  LC   +  EA  LL +M   G    PD  +Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G ++ A   +  M   G    V +YS +I   CK + ++ A+ + + M+  G+ P+   +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++  G     Q + A     +M  +GV  D  TY + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 338 LKCEFDIRAYNSLIDG--------------------------------LC---KSGRLEI 362
              + +I  Y +L+ G                                +C   K G+++ 
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+ +F  +    L P+ VTY  +IG LC  G+++ A   F  M +  + P  I ++ LI 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
                ++  K  EL+ +M +  +  D    + ++D
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 145/303 (47%), Gaps = 6/303 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D + F S+I   C E R++E+  LF  +   G +PD+ TY+TL++G C       A  L 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M +      V  +P+ VTY T+I+G CK   ++ A  L  +M+   + P+++TY  ++
Sbjct: 538 ASMVS------VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G    +    AK L++ + + G Q  + T+N+I+  LCKN   DEA R+   +    ++
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +  T+N ++      GR + AK+LF ++ + G    V +YS++     +   +E    L
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M   G   +  + N++   L +   + RA      +     + +  T   F+D L  
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771

Query: 322 NGY 324
             Y
Sbjct: 772 GKY 774



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+  +   G + ++ T
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+ + T  AL +F+ +   + +        T T+  +I  L K G  D+AK+
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKVGRNDEAKD 675

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   +    + P+V TY+ +           E   LF+ M + G   N    N I+ +L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           + G +  A   L ++ +     +A T +  LD
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/470 (32%), Positives = 250/470 (53%), Gaps = 31/470 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ SL+  LC   R  EA  +F  +   G EPD+ TY TL+ G   T   +V ++ 
Sbjct: 299 PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA-TKGALVEMHA 357

Query: 81  FEEMANGNG------EFGV-VC-----------------------EPNTVTYTTIIDGLC 110
             ++   NG       F + +C                        PN VTY  +I  LC
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G VD A     QM D+ + PN++ YTS+I   C    W++A+ L +EM+D+G+  N +
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN I+   CK G++ E+ +L DLM++ GV+P+  TY+TL+DG+CL G+++ A +L  SM
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G K    +Y+ LINGYC+   ++ AL+L+ EM+S G+ P+++ +N +  GLF   + 
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L+  + ++G   +  TY   + GLCKN    EA+ +F  L +   + + R +N +
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I  L K GR + A +LF +     LVPN  TY +M   +   G +++   LF  ME+N  
Sbjct: 658 IGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGC 717

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
             +    + ++R  ++  E ++    L  + E +   +AS  S+ +DLL+
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS 767



 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 268/542 (49%), Gaps = 74/542 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  +A+TFT L+KGLCA+ R  +A  +   ++    C PDVF+
Sbjct: 101 GRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFS 160

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T L+ GLC  + +  AL L   MA+  G       P+ V+YTT+I+G  KEG  DKA  
Sbjct: 161 CTILLKGLCDENRSQEALELLHMMADDRGGGSA---PDVVSYTTVINGFFKEGDSDKAYS 217

Query: 121 LLLQMKDKNIKPNVVTYTSVI-----------------------------------RGFC 145
              +M D+ I P+VVTY+S+I                                    G+C
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR--------------- 190
            ++   EA     +M   GV+P+VVT+N +MD LCKNG+  EA +               
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337

Query: 191 --------------------LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
                               LLDLM+++G+ PD   +N L+  +    +V+ A  +F  M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G    V +Y  +I   CK+  ++ A+  + +M+ +G+ P+++++ +L   L    + 
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           ++A +L  EM   G+  +T  + + I   CK G ++E+ +LF  +  +  + ++  Y++L
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           IDG C +G+++ A +L  S+    + P+ VTY+ +I G C   +MD A  LF +M  + V
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            PN+IT++++++G       +   EL   + +     + S  +I++  L KN ++  +L 
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 471 SF 472
            F
Sbjct: 638 MF 639



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 234/460 (50%), Gaps = 6/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     +     +L    +PD VT++S+I  LC    + +A  + T +   G  P+  TY
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C +     A+   ++M +     GV  EP+ VTY +++D LCK G   +A+++
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSD----GV--EPDVVTYNSLMDYLCKNGRSTEARKI 323

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  + ++P++ TY ++++G+       E   L   M+  G+ P+   FN+++    K
Sbjct: 324 FDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAK 383

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+DEA  +   M QHG+ P+  TY  ++   C +G V+ A   F  M   G    +  
Sbjct: 384 QEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIV 443

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+  C   + + A  L  EML +GI  + +  N++     +  +V  + KLFD M 
Sbjct: 444 YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV 503

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R GV  +  TY T IDG C  G + EA +L  ++  +  + D   YN+LI+G C+  R++
Sbjct: 504 RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMD 563

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL LF+ +    + PN++TY+I++ GL +  +   A++L++ + ++     + T+++++
Sbjct: 564 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G  + N   + + +   +   ++  +    +I++  L K
Sbjct: 624 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 217/445 (48%), Gaps = 16/445 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP   T+  LI   C   R+    A    +   G   +  T+T L+ GLC    T  A++
Sbjct: 84  TPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMD 143

Query: 80  L-FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---NIKPNVV 135
           +    M        + C P+  + T ++ GLC E    +A ELL  M D       P+VV
Sbjct: 144 IVLRRMTE------LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVV 197

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +YT+VI GF    D ++A   + EM+D+ + P+VVT++ I+  LCK   MD+A  +L  M
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTM 257

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +++GV P+  TYN++L G+C + +   A      M S G +  V +Y+ L++  CKN   
Sbjct: 258 VKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRS 317

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  ++  M  +G++PD+  + TL  G      +     L D M RNG+  D   +   
Sbjct: 318 TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL 377

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I    K   + EA+ +F  +R      ++  Y ++I  LCKSG ++ A+  F  +    L
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSK 432
            PN++ Y+ +I  LC   + DKA +L L+M +  +  N I F+ +I       R+ E  K
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 433 VIELLHKMKEINVMPDASIVSIVVD 457
           + +L   M  I V P+    S ++D
Sbjct: 498 LFDL---MVRIGVKPNVITYSTLID 519



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 6/303 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + + F S+I   C E R++E+  LF  +   G +P+V TY+TL++G C       A  L 
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M      F V  +P+ VTY T+I+G C+   +D A  L  +M    + PN++TY  ++
Sbjct: 535 SSM------FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G  + +    AK L++ +   G Q  + T+N+I+  LCKN   DEA R+   +    ++
Sbjct: 589 QGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 648

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +  T+N ++      GR + AK+LFV+  S G     ++Y ++         +E    L
Sbjct: 649 LETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M   G   D  + N +   L +  ++ RA      +     + +  T   FID L  
Sbjct: 709 FFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768

Query: 322 NGY 324
             Y
Sbjct: 769 GKY 771



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/369 (21%), Positives = 159/369 (43%), Gaps = 43/369 (11%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG---VRPDAFTYN 208
           +A+ +F E++ +G   ++   N  + ++ ++      SR  + M + G   V P   TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYG 91

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+   C  GR++       ++   G +    +++ L+ G C +K    A+ +    +++
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 269 ---------------------------------------GIKPDVVIHNTLFVGLFEIHQ 289
                                                  G  PDVV + T+  G F+   
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            ++A+  + EM    ++ D  TY + I  LCK   + +A+E+  T+       +   YNS
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++ G C S + + A+   + +    + P+VVTY+ ++  LC +G+  +AR +F  M +  
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + P++ T+  L++G+       ++  LL  M    + PD  + +I++   AK E    ++
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 470 PSFTVHEQQ 478
             F+   Q 
Sbjct: 392 LVFSKMRQH 400



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 6/210 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     +   ++ S  +P+ +T+  +++GL    R   A  L+  +   G + ++ TY 
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++GLC+ + T  AL +F+ +   + +        T T+  +I  L K G  D+AK+L 
Sbjct: 621 IILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKVGRNDEAKDLF 674

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           +      + PN  TY  +           E  +LF  M D G   +    N I+ EL + 
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQR 734

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           G++  A   L ++ +     +A T +  +D
Sbjct: 735 GEITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 142/360 (39%), Positives = 218/360 (60%), Gaps = 6/360 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F VLG+I+K  F PDAVTF+SLI GLC E +   A   F ++   G +P++ T
Sbjct: 132 LQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++ G C+   T VA+ L ++M    G       P+ V Y TIIDGLCK+  V +A +
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGR------PDIVIYNTIIDGLCKDRLVSEALD 245

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  ++K K ++P+V TY+ ++ G C +    EA  LF EMM   + P+VVTFN+++D+LC
Sbjct: 246 IFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLC 305

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + EA  ++ +MI+ GV P+  TYN+L++G+CL  +V  A+ +F +M + GC   V 
Sbjct: 306 KEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVV 365

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ILINGYCK + I+ A  L+ EM  +G+ P+   +NTL  GL +  +   A +LF +M
Sbjct: 366 SYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDM 425

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           Q  G + D  T    +D LCK GY+  A+ LF  ++    + ++  Y+ LI  + KSG++
Sbjct: 426 QAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 208/407 (51%), Gaps = 6/407 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P +  +  L++ L R  H    L+L + +        +  E +   +  +I+   +   V
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIEL------LRIERDVFHFNILINCFSRLQRV 135

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  +L ++     +P+ VT++S+I G C+   +  A   F EM+  G QPN+ T+N I
Sbjct: 136 DFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTI 195

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +   CK GK   A  LL  M + G RPD   YNT++DG C    V+ A ++F  ++  G 
Sbjct: 196 IKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGV 255

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  VF+YSIL++G C + + E A +L++EM+S  I PDVV  N L   L +   +  A  
Sbjct: 256 RPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQG 315

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +   M   GV  +  TY + ++G C    + EA  +F  +    C  ++ +YN LI+G C
Sbjct: 316 IIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYC 375

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K+ R++ A ELF  +    L+PN   Y+ +I GLC  G+  +AR+LF DM+     P+++
Sbjct: 376 KAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLV 435

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T  +L+    ++      + L   M++  + P+     I++  + K+
Sbjct: 436 TCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKS 482



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 171/292 (58%), Gaps = 6/292 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+ +    +L ++ K+   PD V + ++I GLC +  + EA  +F++++  G  PDVFT
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L++GLC +     A  LF EM + N        P+ VT+  ++D LCKEG + +A+ 
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLN------IMPDVVTFNILVDKLCKEGMLSEAQG 315

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++  M +K ++PN  TY S++ G+C      EA+ +F  M+ +G  PNVV++N++++  C
Sbjct: 316 IIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYC 375

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++DEA  L D M   G+ P+ F YNTL+ G C  GR   A+ELF  M++ GC   + 
Sbjct: 376 KAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLV 435

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           + +IL++  CK   ++ AL L+  M    +KP++V ++ L   +++  ++ R
Sbjct: 436 TCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 88/184 (47%)

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           +E A   F+ M           +   +  L +  +    + L   + +L+ E D+  +N 
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+   +  R++ A  +   +      P+ VT+S +I GLC + +  +A + F +M  + 
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
             PN+ T++ +I+GF +I + +  + LL KM +    PD  I + ++D L K+ +   +L
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 470 PSFT 473
             F+
Sbjct: 245 DIFS 248


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/445 (33%), Positives = 243/445 (54%), Gaps = 11/445 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PDA T+T LI+ LC   R+ +A +L   +   GC+P+V TYT L+  +C+ S    A+ 
Sbjct: 139 APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMA 198

Query: 80  LFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           + +EM A G       C PN VTY  II+G+C+EG VD A++LL ++     +P+ V+YT
Sbjct: 199 VLDEMRAKG-------CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYT 251

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++++G C +K W++ + LF EMM++   PN VTF++++   C+ G ++ A ++L  M +H
Sbjct: 252 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEH 311

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
               +    N +++  C  GRV+ A +   +M S GC     SY+ ++ G C+ +    A
Sbjct: 312 ECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDA 371

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L  EM+     P+ V  NT    L +   +E+A  L ++MQ +G      TY   ++G
Sbjct: 372 KELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNG 431

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C  G+I  A+ELF   R + C+ +   Y +L+ GLC + RL+ A EL   +      PN
Sbjct: 432 FCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPN 488

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVT+++++   C  G +D+A +L   M E+   PN+IT++ L  G  +       +ELLH
Sbjct: 489 VVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548

Query: 439 KMKEINVMPDASIVSIVVDLLAKNE 463
            +    V PD    S ++ +L+K +
Sbjct: 549 GLVSKGVSPDVITFSSIIGILSKED 573



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 153/485 (31%), Positives = 232/485 (47%), Gaps = 47/485 (9%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD    T LI+ LC   R  +AA +       G   DVF Y TLV G CR  H   A  
Sbjct: 72  APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 131

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M            P+  TYT +I  LC  G V  A  LL  M  +  +PNVVTYT 
Sbjct: 132 LIGSMPVA---------PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 182

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++   C    + +A  +  EM  +G  PN+VT+NVI++ +C+ G++D+A  LL+ +  +G
Sbjct: 183 LLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG 242

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY----------------- 242
            +PD  +Y TLL G C + R +  +ELF  M    C     ++                 
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 302

Query: 243 ------------------SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
                             +I+IN  CK   ++ A    + M S G  PD + + T+  GL
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGL 362

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               +   A +L  EM RN    +  T+ TFI  LC+ G I +A+ L   ++   C   +
Sbjct: 363 CRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGV 422

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN+L++G C  G ++ ALELFRS+PC    PN +TY+ ++ GLCN  ++D A +L  +
Sbjct: 423 VTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAE 479

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M      PNV+TF++L+  F +     + IEL+ +M E    P+    + + D + K+  
Sbjct: 480 MLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCS 539

Query: 465 SLNSL 469
           S ++L
Sbjct: 540 SEDAL 544



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 242/495 (48%), Gaps = 44/495 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV+    +L  +L+    P+ VT+T L++ +C  S   +A A+  ++R  GC P++ TY
Sbjct: 156 GRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTY 215

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NG+CR      A +L   +      F   C+P+TV+YTT++ GLC     D  +EL
Sbjct: 216 NVIINGMCREGRVDDARDLLNRL------FSYGCQPDTVSYTTLLKGLCASKRWDDVEEL 269

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +KN  PN VT+  +IR FC       A ++  +M +     N    N++++ +CK
Sbjct: 270 FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICK 329

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV------------- 228
            G++D+A + L+ M  +G  PD  +Y T+L G C   R N AKEL               
Sbjct: 330 QGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVT 389

Query: 229 ----------------------SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                                  M+  GC   V +Y+ L+NG+C    I+ AL L+  M 
Sbjct: 390 FNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM- 448

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
               KP+ + + TL  GL    +++ A +L  EM       +  T+   ++  C+ G++ 
Sbjct: 449 --PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLD 506

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA+EL   +    C  ++  YN+L DG+ K    E ALEL   L    + P+V+T+S +I
Sbjct: 507 EAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 566

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
           G L  + ++++A  +F   ++  + P  + ++ ++ G  + +E    I+ L  M     M
Sbjct: 567 GILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCM 626

Query: 447 PDASIVSIVVDLLAK 461
           P+ S   I+++ LA+
Sbjct: 627 PNESTYIILIEGLAR 641



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 211/433 (48%), Gaps = 38/433 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L R+      PD V++T+L+KGLCA  R  +   LF ++    C P+  T+
Sbjct: 226 GRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 285

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+   CR      A+ + ++M          C  NT     +I+ +CK+G VD A + 
Sbjct: 286 DMLIRFFCRGGMVERAIQVLQQMTEHE------CATNTTLCNIVINSICKQGRVDDAFKF 339

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      P+ ++YT+V++G C A+ WN+AK L  EM+     PN VTFN  +  LC+
Sbjct: 340 LNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQ 399

Query: 182 NGKMDEASRLLDLMIQHGV--------------------------------RPDAFTYNT 209
            G +++A  L++ M +HG                                 +P+  TY T
Sbjct: 400 KGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTT 459

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           LL G C   R++ A EL   M    C   V ++++L+N +C+   ++ A+ L  +M+  G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
             P+++ +NTLF G+ +    E A +L   +   GV+ D  T+ + I  L K   + EA+
Sbjct: 520 CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAI 579

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           ++FH  + +        YN ++ GLCK   ++ A++    +     +PN  TY I+I GL
Sbjct: 580 QMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGL 639

Query: 390 CNDGQMDKARDLF 402
             +G + +A+DL 
Sbjct: 640 AREGLLKEAQDLL 652



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 170/334 (50%), Gaps = 9/334 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F  L  +      PD +++T+++KGLC   R  +A  L  ++    C P+  T+
Sbjct: 331 GRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTF 390

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T +  LC+      A+ L E+M       GVV      TY  +++G C +G +D A EL
Sbjct: 391 NTFICILCQKGLIEQAIMLIEQMQEHGCTVGVV------TYNALVNGFCVQGHIDSALEL 444

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M     KPN +TYT+++ G C A+  + A  L  EM+ +   PNVVTFNV+++  C+
Sbjct: 445 FRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQ 501

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +DEA  L++ M++HG  P+  TYNTL DG         A EL   + S G    V +
Sbjct: 502 KGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVIT 561

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +S +I    K   +E A+ ++      G++P  +++N + +GL + H+++ A      M 
Sbjct: 562 FSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMV 621

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            NG   +  TY   I+GL + G + EA +L   L
Sbjct: 622 SNGCMPNESTYIILIEGLAREGLLKEAQDLLSML 655



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 9/298 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  ++++   P+ VTF + I  LC +  I +A  L  +++  GC   V TY  LVNG C
Sbjct: 374 LLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFC 433

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
              H   AL LF  M          C+PNT+TYTT++ GLC    +D A EL+ +M  ++
Sbjct: 434 VQGHIDSALELFRSMP---------CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRD 484

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PNVVT+  ++  FC     +EA  L  +MM+ G  PN++T+N + D + K+   ++A 
Sbjct: 485 CPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDAL 544

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  ++  GV PD  T+++++       RV  A ++F   + +G +     Y+ ++ G 
Sbjct: 545 ELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGL 604

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           CK  EI+ A+   + M+S G  P+   +  L  GL     ++ A  L   +   GV +
Sbjct: 605 CKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVS 662



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 6/339 (1%)

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF-IEMMDQGVQPNVVTFNVIMDELCKNGK 184
           +  N+ PN  +  + +R     +D   A RL  +     G  P+V     ++  LC+ G+
Sbjct: 33  ESPNVAPNPAS--ARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGR 90

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
             +A+R+L      G   D F YNTL+ G+C  G ++ A+ L   + SM      ++Y+ 
Sbjct: 91  TSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL---IGSMPVAPDAYTYTP 147

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI   C    +  ALSL  +ML +G +P+VV +  L   + +    E+A  + DEM+  G
Sbjct: 148 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG 207

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY   I+G+C+ G + +A +L + L    C+ D  +Y +L+ GLC S R +   
Sbjct: 208 CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVE 267

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           ELF  +     +PN VT+ ++I   C  G +++A  +   M E+    N    +++I   
Sbjct: 268 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSI 327

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +        + L+ M      PD    + V+  L + E
Sbjct: 328 CKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 167/542 (30%), Positives = 270/542 (49%), Gaps = 75/542 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+ FT ++KGLCA+ R  +A  +   ++   GC P+VF+
Sbjct: 105 GRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC  + +  AL L + M +  G+    C P+ V+YTT+I+G  KEG +DKA  
Sbjct: 165 YNILLKGLCDDNRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I PNVVTY+S+I   C A+  ++A  +   M+  GV PN  T+N I+   C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G+  EA   L  M   GV PD  TYN+L+D  C  GR   A+++F SM   G K  + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 241 SY-----------------------------------SILINGYCKNKEIEGALSLYSEM 265
           +Y                                   SILI  Y K  +++ A+ ++S+M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD--------------------------- 298
             +G+ PD V + T+   L +  +VE A + F+                           
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 299 --------EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
                   EM   G+  DT  + + ID  CK G ++E+ +LF  +  +  + DI  Y++L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           IDG C +G+++ A +L  S+    + P+ VTY+ +I G C   +M+ A  LF +ME + V
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            P++IT++++++G  +    +   EL   + E     + S  +I++  L KN ++  +L 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 471 SF 472
            F
Sbjct: 641 MF 642



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/470 (34%), Positives = 253/470 (53%), Gaps = 31/470 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ SL+  LC   R  EA  +F  +   G +P++ TY TL+ G   T   +V ++ 
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHG 360

Query: 81  FEEMANGNG------EFGV-VC-----------------------EPNTVTYTTIIDGLC 110
             ++   NG       F + +C                        P+TVTY T+I  LC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G V+ A     QM D+ + P  + Y S+I   C    W++AK L +EM+D+G+  + +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN I+D  CK G++ E+ +L DLM++ GV+PD  TY+TL+DG+CL G+++ A +L  SM
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G K    +Y+ LINGYCK   +E AL L+ EM S G+ PD++ +N +  GLF+  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L+  +  +G   +  TY   + GLCKN    EA+ +F  L +   + + R +N +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I  L K GR + A +LF +L    LVP+V TYS+M   L   G +++  DLFL MEEN  
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
             N    + ++R  ++  + ++    L  + E +   +AS  S+ +DLL+
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLS 770



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 201/455 (44%), Gaps = 42/455 (9%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  +F +L   G    ++     +  + R S    A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  ++   C  G +D     L  +  K    + + +T +++G C  K  ++A  + +  
Sbjct: 93  TYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRR 152

Query: 161 MDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLT 217
           M Q G  PNV ++N+++  LC + +  EA  LL +M   G    PD  +Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G ++ A   +  M   G    V +YS +I   CK + ++ A+ + + M+  G+ P+   +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++  G     Q + A     +M  +GV  D  TY + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 338 LKCEFDIRAYNSLIDG--------------------------------LC---KSGRLEI 362
              + +I  Y +L+ G                                +C   K G+++ 
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+ +F  +    L P+ VTY  +IG LC  G+++ A   F  M +  + P  I ++ LI 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
                ++  K  EL+ +M +  +  D    + ++D
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 145/303 (47%), Gaps = 6/303 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D + F S+I   C E R++E+  LF  +   G +PD+ TY+TL++G C       A  L 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M +      V  +P+ VTY T+I+G CK   ++ A  L  +M+   + P+++TY  ++
Sbjct: 538 ASMVS------VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G    +    AK L++ + + G Q  + T+N+I+  LCKN   DEA R+   +    ++
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +  T+N ++      GR + AK+LF ++ + G    V +YS++     +   +E    L
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M   G   +  + N++   L +   + RA      +     + +  T   F+D L  
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771

Query: 322 NGY 324
             Y
Sbjct: 772 GKY 774



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+  +   G + ++ T
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+ + T  AL +F+ +   + +        T T+  +I  L K G  D+AK+
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKVGRNDEAKD 675

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   +    + P+V TY+ +           E   LF+ M + G   N    N I+ +L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           + G +  A   L ++ +     +A T +  LD
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 150/444 (33%), Positives = 244/444 (54%), Gaps = 8/444 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++ G   +  + E   L   +   G  P+   +    +   +      A+++F +M    
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMR--- 57

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
            + G+   P+ V+Y  +ID LCK G VD A+    QM ++ + PN+V ++S++ G C   
Sbjct: 58  -QHGL--SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSID 114

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            W + + LF EM++ G+ PN+V FN I+  LCK G++ E  RL+D +   GVRPD  +YN
Sbjct: 115 KWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYN 174

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           TL+DG CL G ++ A +L   M S+G K   FSY+ L++GYCK   I+ A SL+ +MLS 
Sbjct: 175 TLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSN 234

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           GI P VV +NT+  GLF+  +   A +L+  M  +G     +TY T ++GLCK+  + EA
Sbjct: 235 GITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEA 294

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            ++F +L     + +I  +  +I  L K GR E A++LF ++P   LVP+VVTY ++   
Sbjct: 295 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAEN 354

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           L  +G +++   LF  ME+N   PN    + L+R  +   + S+    L K+ E N   +
Sbjct: 355 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVE 414

Query: 449 ASIVSIVVDLLAKNEIS--LNSLP 470
           AS  S+++ + + +E      SLP
Sbjct: 415 ASTTSMLISIFSSDEYQHHAKSLP 438



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 200/400 (50%), Gaps = 6/400 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +  ++ +   +PDAV++ +LI  LC   R+ +A   F ++   G  P++  +
Sbjct: 44  GMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 103

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++LV GLC          LF EM N      V   PN V + TI+  LCKEG V + + L
Sbjct: 104 SSLVYGLCSIDKWEKVEELFFEMLN------VGIHPNIVFFNTILCNLCKEGRVMEGQRL 157

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  ++   ++P+V++Y ++I G C A   +EA +L   M+  G++PN  ++N ++   CK
Sbjct: 158 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCK 217

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D A  L   M+ +G+ P   TYNT+L G   T R + AKEL+++M + G K  +++
Sbjct: 218 AGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYT 277

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++NG CK+  ++ A  ++  + SKG++ +++    +   L +  + E A  LF  + 
Sbjct: 278 YNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 337

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG+  D  TYR   + L + G + E   LF  +       + +  N+L+  L   G + 
Sbjct: 338 ANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDIS 397

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            A      L          T S++I    +D     A+ L
Sbjct: 398 RAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 437



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 169/328 (51%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV    V   +++    TP+ V F+SL+ GLC+  +  +   LF ++   G  P++  
Sbjct: 78  LGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVF 137

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T++  LC+    +    L + +       GV   P+ ++Y T+IDG C  G +D+A +
Sbjct: 138 FNTILCNLCKEGRVMEGQRLVDSIEC----MGV--RPDVISYNTLIDGHCLAGTIDEASK 191

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M    +KPN  +Y +++ G+C A   + A  LF +M+  G+ P VVT+N I+  L 
Sbjct: 192 LLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLF 251

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  +  EA  L   MI  G +   +TYNT+L+G C +  V+ A ++F S+ S G +  + 
Sbjct: 252 QTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 311

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++I+I    K    E A+ L++ + + G+ PDVV +  +   L E   +E    LF  M
Sbjct: 312 TFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAM 371

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           ++NG A ++      +  L   G I  A
Sbjct: 372 EKNGTAPNSQMLNALVRRLLHRGDISRA 399



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 149/318 (46%), Gaps = 6/318 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V F +++  LC E R+ME   L   +   G  PDV +Y TL++G C       A  L
Sbjct: 133 PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL 192

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E M +      V  +PN+ +Y T++ G CK G +D A  L  +M    I P VVTY ++
Sbjct: 193 LEGMVS------VGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTI 246

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G    K ++EAK L++ M++ G +  + T+N I++ LCK+  +DEA ++   +   G+
Sbjct: 247 LHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGL 306

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + +  T+  ++      GR   A +LF ++ + G    V +Y ++     +   +E   S
Sbjct: 307 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDS 366

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+S M   G  P+  + N L   L     + RA     ++     + +  T    I    
Sbjct: 367 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFS 426

Query: 321 KNGYIVEAVELFHTLRIL 338
            + Y   A  L    RIL
Sbjct: 427 SDEYQHHAKSLPKKYRIL 444


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 156/486 (32%), Positives = 254/486 (52%), Gaps = 29/486 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +  ++  F VL  ILK  + P+A+T  +LIKGLC    I +A     ++   G + +  +
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+T  T     L  ++       G   +P+ V Y TII  LCK   +  A +
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIIHSLCKNKLLGDACD 224

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I PNVVTY +++ GFC      EA  L  EM  + + P+V TFN ++D L 
Sbjct: 225 LYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALG 284

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GKM  A  +L +M++  ++PD  TYN+L+DG+    +V +AK +F SM   G    V 
Sbjct: 285 KEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVR 344

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I+G CK K ++ A+SL+ EM  K + PD+V + +L  GL + H +ERA  L  +M
Sbjct: 345 TYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKM 404

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G+  D ++Y   +D LCK G +  A E F  L +     +++ YN +I+GLCK+   
Sbjct: 405 KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLF 464

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-------------EE 407
             A++L   +     +P+ +T+  +I  L    + DKA  +  +M             +E
Sbjct: 465 GEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKE 524

Query: 408 NAVV----------PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +V          P+V+T+  L+ G+  +NE      + + M ++ V P+    +I++D
Sbjct: 525 AKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMID 584

Query: 458 LLAKNE 463
            L K +
Sbjct: 585 GLCKKK 590



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/428 (32%), Positives = 232/428 (54%), Gaps = 29/428 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + +V +   V   + +S  TP+  T+T++I GLC E  + EA +LF +++     PD+ T
Sbjct: 321 LNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVT 380

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT+L++GLC+  H   A+ L ++M     E G+  +P+  +YT ++D LCK G ++ AKE
Sbjct: 381 YTSLIDGLCKNHHLERAIALCKKMK----EQGI--QPDVYSYTILLDALCKGGRLENAKE 434

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              ++  K    NV TY  +I G C A  + EA  L  +M  +G  P+ +TF  I+  L 
Sbjct: 435 FFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALF 494

Query: 181 KNGKMDEASRLLDLMIQHG-----------------------VRPDAFTYNTLLDGFCLT 217
           +  + D+A ++L  MI  G                       ++PD  TY TL+DG+ L 
Sbjct: 495 EKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLV 554

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             + HAK +F SM  MG    V  Y+I+I+G CK K ++ A+SL+ EM  K + P++V +
Sbjct: 555 NELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTY 614

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
            +L   L + H +ERA  L  EM+ +G+  D ++Y   +DGLCK+G +  A E+F  L +
Sbjct: 615 TSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLV 674

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                +++ Y ++I+ LCK+G  + AL+L   +     +P+ VT+ I+I  L    + DK
Sbjct: 675 KGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDK 734

Query: 398 ARDLFLDM 405
           A  +  +M
Sbjct: 735 AEKILXEM 742



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 246/488 (50%), Gaps = 32/488 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVF 59
           MG +   F +L  +      PD  TF +LI  L  E + M+AA +   + +  C +PDV 
Sbjct: 251 MGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK-MKAAKIVLAVMMKACIKPDVV 309

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY +L++G    +    A  +F  MA      GV   PN  TYTT+IDGLCKE  VD+A 
Sbjct: 310 TYNSLIDGYFFLNKVKNAKYVFYSMAQS----GVT--PNVRTYTTMIDGLCKEKMVDEAM 363

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L  +MK KN+ P++VTYTS+I G C       A  L  +M +QG+QP+V ++ +++D L
Sbjct: 364 SLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDAL 423

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G+++ A      ++  G   +  TYN +++G C       A +L   ME  GC    
Sbjct: 424 CKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDA 483

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKG-----------------------IKPDVVI 276
            ++  +I    +  E + A  +  EM+++G                       IKPDVV 
Sbjct: 484 ITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVT 543

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + TL  G F +++++ A  +F  M + GV  +   Y   IDGLCK   + EA+ LF  ++
Sbjct: 544 YGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMK 603

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 +I  Y SLID LCK+  LE A+ L + +    + P+V +Y+I++ GLC  G+++
Sbjct: 604 HKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLE 663

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A+++F  +       NV  +  +I    +     + ++L  KM++   MPDA    I++
Sbjct: 664 GAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIII 723

Query: 457 -DLLAKNE 463
             L  K+E
Sbjct: 724 WALFEKDE 731



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 225/465 (48%), Gaps = 29/465 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V + ++I  LC    + +A  L++++ V G  P+V TY  LV G C   H   A +L
Sbjct: 201 PDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSL 260

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM   N        P+  T+ T+ID L KEG +  AK +L  M    IKP+VVTY S+
Sbjct: 261 LNEMKLKN------INPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSL 314

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+ +      AK +F  M   GV PNV T+  ++D LCK   +DEA  L + M    +
Sbjct: 315 IDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNM 374

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY +L+DG C    +  A  L   M+  G +  V+SY+IL++  CK   +E A  
Sbjct: 375 IPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKE 434

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            +  +L KG   +V  +N +  GL +      A  L  +M+  G   D  T++T I  L 
Sbjct: 435 FFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALF 494

Query: 321 KNG-----------YIVEAVELFHTLRILKCEF------------DIRAYNSLIDGLCKS 357
           +              I   ++    +R+ + +             D+  Y +L+DG    
Sbjct: 495 EKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLV 554

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
             L+ A  +F S+    + PNV  Y+IMI GLC    +D+A  LF +M+   + PN++T+
Sbjct: 555 NELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTY 614

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             LI    + +   + I LL +MKE  + PD    +I++D L K+
Sbjct: 615 TSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKS 659



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 224/444 (50%), Gaps = 7/444 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    F  ++  L          +LF K    G  PD+ T   L+N  C  +H   A ++
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              +            PN +T  T+I GLC  G + KA     Q+  +  + N V+Y ++
Sbjct: 121 LANILKRG------YHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTL 174

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C   +     RL  ++    V+P+VV +N I+  LCKN  + +A  L   MI  G+
Sbjct: 175 INGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGI 234

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TYN L+ GFC+ G +  A  L   M+       V +++ LI+   K  +++ A  
Sbjct: 235 SPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKI 294

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + + M+   IKPDVV +N+L  G F +++V+ A  +F  M ++GV  +  TY T IDGLC
Sbjct: 295 VLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLC 354

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + EA+ LF  ++      DI  Y SLIDGLCK+  LE A+ L + +    + P+V 
Sbjct: 355 KEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVY 414

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y+I++  LC  G+++ A++ F  +       NV T++++I G  + +   + ++L  KM
Sbjct: 415 SYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM 474

Query: 441 KEINVMPDA-SIVSIVVDLLAKNE 463
           +    MPDA +  +I+  L  K+E
Sbjct: 475 EGKGCMPDAITFKTIICALFEKDE 498



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 155/321 (48%), Gaps = 17/321 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+ +      R+L   +  +  T+  +I GLC      EA  L +K+   GC PD  T+
Sbjct: 427 GRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITF 486

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVV----------------CEPNTVTYTT 104
            T++  L        A  +  EM A G  E   V                 +P+ VTY T
Sbjct: 487 KTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGT 546

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           ++DG      +  AK +   M    + PNV  YT +I G C  K  +EA  LF EM  + 
Sbjct: 547 LMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKN 606

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + PN+VT+  ++D LCKN  ++ A  LL  M +HG++PD ++Y  LLDG C +GR+  AK
Sbjct: 607 MFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAK 666

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           E+F  +   G    V  Y+ +IN  CK    + AL L  +M  KG  PD V  + +   L
Sbjct: 667 EIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWAL 726

Query: 285 FEIHQVERAFKLFDEMQRNGV 305
           FE  + ++A K+  EM   G+
Sbjct: 727 FEKDENDKAEKILXEMIARGL 747



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 144/308 (46%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F  M+     P    FN I+  L  N        L      +G  PD  T N L++ FC 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
              +  A  +  ++   G      + + LI G C   EI+ AL  + +++++G + + V 
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + TL  GL +  + +   +L  +++ + V  D   Y T I  LCKN  + +A +L+  + 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
           +     ++  YN+L+ G C  G L+ A  L   +    + P+V T++ +I  L  +G+M 
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A+ +   M +  + P+V+T++ LI G+  +N+      + + M +  V P+    + ++
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350

Query: 457 DLLAKNEI 464
           D L K ++
Sbjct: 351 DGLCKEKM 358


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 155/443 (34%), Positives = 248/443 (55%), Gaps = 14/443 (3%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC + D VT+TSLI+GLC   R+ +A     K+   G  PDV+TYT +++ LC  +    
Sbjct: 6   SC-SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A    EEMAN N        PN VTYT +IDGLCK G VD+A  LL +M+ K + P  VT
Sbjct: 65  ARKFLEEMANRN------LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVT 117

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y S+I G C A+  +EA  L  EM+  G  P++ T+  ++   CK+ K D+A R+ + ++
Sbjct: 118 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 177

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEI 255
             G RPD  TY+ L+DG C  GR+  A +LF  M +S  C     +Y+ LI+G+C+  ++
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A++L   M   G  PDVV + TL  G  ++ +++ A+ L ++M R G+  D  T+ + 
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE-LFRSLPCGV 374
           +DGLC+   + +AV +   +R   C   +  YN+++DG C++ +LE A + +   + C  
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP- 356

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             PNVV+++IMI GLC   +  +A +L  +       P+V+ +  +I G  R  +  +  
Sbjct: 357 --PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 435 ELLHKM-KEINVMPDASIVSIVV 456
            +  KM +E   +P++   S +V
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLV 437



 Score =  277 bits (708), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 157/475 (33%), Positives = 247/475 (52%), Gaps = 50/475 (10%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+    + LG+++   F PD  T+T++I  LC E+R+ EA     ++      P+V TYT
Sbjct: 26  RLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYT 85

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++GLC+      A+ L  +M          C P  VTY ++I GLCK     +A +LL
Sbjct: 86  VLIDGLCKGGRVDEAVALLSKMRKK-------CVPTAVTYNSLISGLCKAERASEAYDLL 138

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M      P++ TYT++I GFC +K  ++A R+F +++ +G +P+VVT++ ++D LCK 
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198

Query: 183 GKMDEASRLLDLMIQHG-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           G++ EA  L   MI+ G   P+  TYN+L+ GFC  G+++ A  L   M   G    V +
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+NG+CK   ++ A  L ++M  KG+ PDVV   +L  GL   +++  A  +  EM+
Sbjct: 259 YTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMR 318

Query: 302 RNGVAADTWTYRTFID---------------------------------GLCKNGYIVEA 328
           R   +   +TY T +D                                 GLCK     EA
Sbjct: 319 RKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEA 378

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL---PCGVLVPNVVTYSIM 385
           +EL    R  +C  D+  Y ++IDGLC+  +++ A  ++R +   P G L PN +TYS +
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP-GCL-PNSITYSTL 436

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           + GLCN G +D+AR       E   VPN+ T+++LI  F + N      ELL  M
Sbjct: 437 VTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/411 (32%), Positives = 219/411 (53%), Gaps = 10/411 (2%)

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
           C  D  TYT+L+ GLC+      AL    +M +          P+  TYT +I  LC E 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFH------PDVYTYTAVIHALCVEN 60

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            + +A++ L +M ++N+ PNVVTYT +I G C     +EA  L  +M  + V P  VT+N
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            ++  LCK  +  EA  LL+ M+  G  PD FTY TL+ GFC + + + A  +F  + + 
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIHNTLFVGLFEIHQVER 292
           G +  V +YS LI+G CK   ++ A+ L+  M+  G   P+ V +N+L  G   + +++ 
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  L + M   G + D  TY T ++G CK   + +A +L + +       D+  + SL+D
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GLC+  RL  A+ +   +      P V TY+ ++ G C   Q+++AR   L  EE    P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML--EEMDCPP 357

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           NV++F+++IRG  ++N  S+ +EL+ + +     PD  + + V+D L + +
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 178/400 (44%), Gaps = 100/400 (25%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L ++ K C  P AVT+ SLI GLC   R  EA  L  ++   GC PD+FTY
Sbjct: 95  GRVDEAVALLSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTY 153

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV--------------------------- 94
           TTL+ G C++  +  AL +FE++        VV                           
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
              C PNTVTY ++I G C+ G +D+A  LL +M +    P+VVTYT+++ GFC     +
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A  L  +M  +G+ P+VVTF  +MD LC+  ++ +A  +L  M +    P  +TYNT+L
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK-------------------- 251
           DG+C   ++  A++    +E M C   V S++I+I G CK                    
Sbjct: 334 DGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCN 391

Query: 252 ---------------NKEIEGALSLYSEMLS----------------------------- 267
                           K+++ A  +Y +ML                              
Sbjct: 392 PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARG 451

Query: 268 ---KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
              KG  P++  +N L     + ++ E A +L D+M + G
Sbjct: 452 YIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 149/270 (55%), Gaps = 13/270 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++     +L R+ ++  +PD VT+T+L+ G C  +R+ +A  L  ++   G  PDV T
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T+L++GLCR +    A+++  EM   +      C P   TY TI+DG C+   +++A++
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKS------CSPTVYTYNTILDGYCRANQLEEARK 347

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            +L+  D    PNVV++  +IRG C     +EA  L  E   +   P+VV +  ++D LC
Sbjct: 348 FMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC 405

Query: 181 KNGKMDEASRLLDLMIQH-GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           +  K+DEA R+   M++  G  P++ TY+TL+ G C  G ++ A+         GC   +
Sbjct: 406 REKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNI 461

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKG 269
            +Y++LI+ + K    E A  L  +M+ +G
Sbjct: 462 GTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 1/170 (0%)

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           N  +AD  TY + I GLCK   + +A+     +       D+  Y ++I  LC   RL  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A +    +    L PNVVTY+++I GLC  G++D+A  L   M +  V P  +T++ LI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           G  +    S+  +LL +M     +PD    + ++    K++ S ++L  F
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 159/468 (33%), Positives = 248/468 (52%), Gaps = 23/468 (4%)

Query: 6   HGFVVLGRI----------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HGF  +G++          +K  F PD VT+ +LI G C   ++ EA  +  ++      
Sbjct: 128 HGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE-GF 114
           PDV TY +LVNGLC+      A  L  +             PN +TY+T+I GLC+E   
Sbjct: 188 PDVVTYNSLVNGLCKNGRVDEARMLIVDKG---------FSPNVITYSTLISGLCRELRR 238

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           ++ A++LL +M     KP++V+Y ++I G    +  +EA +LF  ++ QG +P V T+N+
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++D L K  +++EA  L   +++HG+ PDA TY   +DG C  GRV  A  +   M+  G
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 358

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C   V S++ +ING CK K ++ A  L S M +KG  P+ +  NTL  G     + ++A 
Sbjct: 359 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCK---NGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
             F EM + GV     TY   +DGLCK    G I EA+ LF  +       D+  Y++LI
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 478

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DGL K+G+L+ A  L  ++     +PNV TY+ +I GLC   ++D+A +LF+ M E   V
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           P+ IT+  +I    +     K + L     E  V+P + +   ++D L
Sbjct: 539 PDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGL 586



 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 156/475 (32%), Positives = 256/475 (53%), Gaps = 13/475 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S    +  R++K+ ++PD VT+ +L+ G C   ++ EA  +F      G  PDV TY
Sbjct: 99  GRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTY 158

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+      A  + + M + +        P+ VTY ++++GLCK G VD+A+ L
Sbjct: 159 NALINGFCKADKLDEAQRILQRMVSES------LVPDVVTYNSLVNGLCKNGRVDEARML 212

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYA-KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++   DK   PNV+TY+++I G C   +    A++L  +M+  G +P++V++N ++  L 
Sbjct: 213 IV---DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLA 269

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +   + EA +L   +++ G  P+  TYN L+DG     RVN A ELF  +   G +    
Sbjct: 270 REQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 329

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++ I+G CK   +E AL +  +M  KG  PDVV HN +  GL +  +V+ A  L   M
Sbjct: 330 TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 389

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS--- 357
           +  G + +  ++ T I G C+ G   +A+  F  +     +  +  YN L+DGLCK+   
Sbjct: 390 EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE 449

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GR++ A+ LF ++     VP+VVTYS +I GL   G++D AR L   ME    +PNV T+
Sbjct: 450 GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 509

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           + LI G   +++  + +EL   M E   +PD      ++  L K E+   +L  F
Sbjct: 510 NSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALF 564



 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 159/445 (35%), Positives = 237/445 (53%), Gaps = 13/445 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFTYTTLVNGLCRTSHTIVA 77
           ++PDA T   L++ L    +I +A     +L V G C  D+ T+   ++GLCR S    A
Sbjct: 12  YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC--DISTFNIYISGLCRASRIGDA 69

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
             +F+ M   +G +     PN +TY  ++ GLC  G +  A+ L  +M      P+VVTY
Sbjct: 70  QTVFDGMRK-HGFW-----PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTY 123

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            +++ GFC     +EA ++F   + +G  P+VVT+N +++  CK  K+DEA R+L  M+ 
Sbjct: 124 NTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS 183

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN-KEIE 256
             + PD  TYN+L++G C  GRV+ A+ L V     G    V +YS LI+G C+  + +E
Sbjct: 184 ESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRRLE 240

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L  +M+  G KPD+V +N L  GL     V  A KLF  + R G   +  TY   I
Sbjct: 241 SARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILI 300

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           DGL K   + EA ELF  L     E D   Y   IDGLCK+GR+E AL + + +     V
Sbjct: 301 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 360

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+VV+++ +I GLC + ++D+A  L   ME     PN I+F+ LI G  R  +  K +  
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 420

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
             +M +  V P     +I+VD L K
Sbjct: 421 FKEMLKRGVKPTVVTYNILVDGLCK 445



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 188/333 (56%), Gaps = 9/333 (2%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           VS    + G +L+  + P+  T+  LI GL  E R+ EA  LF+ L   G EPD  TYT 
Sbjct: 274 VSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 333

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
            ++GLC+      AL + ++M          C P+ V++  +I+GLCKE  VD+A+ LL 
Sbjct: 334 FIDGLCKAGRVEDALLMLKDMDEKG------CVPDVVSHNAVINGLCKEKRVDEAEVLLS 387

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK-- 181
            M+ K   PN +++ ++I G C A  W +A   F EM+ +GV+P VVT+N+++D LCK  
Sbjct: 388 GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKAR 447

Query: 182 -NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G++ EA  L D MI+ G  PD  TY+ L+DG    G+++ A+ L  +ME+ GC   V+
Sbjct: 448 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 507

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G C   +++ AL L+  M+ KG  PD + + T+   L +   V++A  LFD  
Sbjct: 508 TYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGS 567

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              GV   +  Y + IDGLC    + EA++L  
Sbjct: 568 LEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/400 (35%), Positives = 204/400 (51%), Gaps = 36/400 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFT 60
           GRV    ++   I+   F+P+ +T+++LI GLC E R +E+A  L  K+ + GC+PD+ +
Sbjct: 204 GRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVS 260

Query: 61  YTTLVNGLCRTSHTIVALNLF------------------------EEMANGNGEF--GVV 94
           Y  L++GL R      AL LF                        E+  N   E   G+V
Sbjct: 261 YNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV 320

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               EP+ +TYT  IDGLCK G V+ A  +L  M +K   P+VV++ +VI G C  K  +
Sbjct: 321 KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVD 380

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           EA+ L   M  +G  PN ++FN ++   C+ GK  +A      M++ GV+P   TYN L+
Sbjct: 381 EAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILV 440

Query: 212 DGFCLT---GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           DG C     GR+  A  LF +M   G    V +YS LI+G  K  +++ A  L   M +K
Sbjct: 441 DGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 500

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  P+V  +N+L  GL  + +V+ A +LF  M   G   DT TY T I  LCK   + +A
Sbjct: 501 GCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKA 560

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           + LF              Y SLIDGLC   R++ AL+L +
Sbjct: 561 LALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 1/191 (0%)

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PD      L   L +  ++E+A +  +++   G+  D  T+  +I GLC+   I +A  +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +R      +   YN+L+ GLC  GR+  A  L+  +      P+VVTY+ ++ G C 
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G++D+A  +F    +   VP+V+T++ LI GF + ++  +   +L +M   +++PD   
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 452 VSIVVDLLAKN 462
            + +V+ L KN
Sbjct: 193 YNSLVNGLCKN 203


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 264/511 (51%), Gaps = 44/511 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFTY 61
           R+  GF  LG ++K  F  +A+TFT L+KGLCA+ R  +A  +   ++    C PDVF+ 
Sbjct: 102 RLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSC 161

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ GLC  + +  AL L   MA+G G       P+ V+YTT+I+G  KEG   KA   
Sbjct: 162 TILLKGLCDENRSQEALELPHMMADGRGGGSA---PDVVSYTTVINGFFKEGDSGKAYST 218

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M D+ I P+VVTY+S+I   C  +  ++A  +   M+  GV PN  T+  IM   C 
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCS 278

Query: 182 NGKMDEA----------------------------------------SRLLDLMIQHGVR 201
           +G+  EA                                          LLDLM+++G+ 
Sbjct: 279 SGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIH 338

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD + YN L+  +   G+V+ A  +F  M   G      +Y  +I   CK+  +E A+  
Sbjct: 339 PDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLY 398

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +M+ +G+ P  +++N+L  GL   ++ ERA +L  EM   G+  +T  + + ID  CK
Sbjct: 399 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 458

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G ++E+ +LF  +  +  + DI  Y++LIDG C +G+++ A++L   +    L PN VT
Sbjct: 459 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 518

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y  +I G C   +M  A  LF +ME + V P++IT++++++G  +    +   EL  ++ 
Sbjct: 519 YRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 578

Query: 442 EINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           E     + S  +I++  L KN+++ ++L  F
Sbjct: 579 ESGTQIELSTYNIILHGLCKNKLTDDALRMF 609



 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 157/486 (32%), Positives = 251/486 (51%), Gaps = 36/486 (7%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD-----VFTYTTL 64
           VL  ++K+   P+  T+TS++ G C+  +  EA     K+R  G EPD     + TY TL
Sbjct: 253 VLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTL 312

Query: 65  VNGLCRTSHTIVALNLFEEMANGNG----------------EFGVVCE------------ 96
           + G   T   +V ++   ++   NG                + G V E            
Sbjct: 313 LQGYA-TKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG 371

Query: 97  --PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
             P+ VTY  +I  LCK G V+ A     QM D+ + P  + Y S+I G C    W  A+
Sbjct: 372 LNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 431

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L +EM+D+G+  N + FN I+D  CK G++ E+ +L DLM++ GV+PD  TY+TL+DG+
Sbjct: 432 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 491

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           CL G+++ A +L   M S+G K    +Y  LINGYCK   +  AL L+ EM S G+ PD+
Sbjct: 492 CLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDI 551

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +N +  GLF+  +   A +L+  +  +G   +  TY   + GLCKN    +A+ +F  
Sbjct: 552 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQN 611

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           L ++  + + R +N +ID L K GR   A +LF +     LVPN  TY +M   +   G 
Sbjct: 612 LCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 671

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +++   LFL ME+N    +    + ++R  ++  E ++    L  + E +   +AS  S+
Sbjct: 672 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASL 731

Query: 455 VVDLLA 460
            +DLL+
Sbjct: 732 FIDLLS 737



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 185/362 (51%), Gaps = 6/362 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V    +V  ++ +    PDAVT+ ++I  LC   R+ +A   F ++   G  P    Y
Sbjct: 355 GKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 414

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++GLC  +    A  L  EM +       +C  NT+ + +IID  CKEG V ++++L
Sbjct: 415 NSLIHGLCTCNKWERAEELILEMLDRG-----IC-LNTIFFNSIIDSHCKEGRVIESEKL 468

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M    +KP+++TY+++I G+C A   +EA +L   M+  G++PN VT+  +++  CK
Sbjct: 469 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCK 528

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +M +A  L   M   GV PD  TYN +L G   T R   AKEL+V +   G +  + +
Sbjct: 529 ISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 588

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+++G CKNK  + AL ++  +    +K +    N +   L ++ +   A  LF    
Sbjct: 589 YNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFS 648

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG+  + WTYR   + +   G + E  +LF ++    C  D    N ++  L + G + 
Sbjct: 649 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEIT 708

Query: 362 IA 363
            A
Sbjct: 709 RA 710



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 145/303 (47%), Gaps = 6/303 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + + F S+I   C E R++E+  LF  +   G +PD+ TY+TL++G C       A+ L 
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLL 504

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M +      V  +PNTVTY T+I+G CK   +  A  L  +M+   + P+++TY  ++
Sbjct: 505 SGMVS------VGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G    +    AK L++ + + G Q  + T+N+I+  LCKN   D+A R+   +    ++
Sbjct: 559 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 618

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +A T+N ++D     GR   AK+LFV+  S G     ++Y ++         +E    L
Sbjct: 619 LEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 678

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M   G   D  + N +   L +  ++ RA      +     + +  T   FID L  
Sbjct: 679 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 738

Query: 322 NGY 324
             Y
Sbjct: 739 GKY 741



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 195/465 (41%), Gaps = 56/465 (12%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN-GNGEFGVVCEPNT 99
           +A  +F +L   G    ++     +  + R S    A++ +  MA  G G+      P  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKV----TPTV 87

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
            TY  +I   C+   +D     L  +  K  +   +T+T +++G C  K  ++A  + + 
Sbjct: 88  HTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR 147

Query: 160 MMDQ---------------------------------------GVQPNVVTFNVIMDELC 180
            M +                                       G  P+VV++  +++   
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFF 207

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G   +A      M+   + PD  TY++++   C    ++ A E+  SM   G      
Sbjct: 208 KEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCR 267

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGI-----KPDVVIHNTLFVGLFEIHQVERAFK 295
           +Y+ +++GYC + + + A+    ++ S G+     +PD+  + TL  G      +     
Sbjct: 268 TYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHA 327

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L D M RNG+  D + Y   I    K G + EA+ +F  +R      D   Y ++I  LC
Sbjct: 328 LLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILC 387

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KSGR+E A+  F  +    L P  + Y+ +I GLC   + ++A +L L+M +  +  N I
Sbjct: 388 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 447

Query: 416 TFDMLIRGFI---RINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            F+ +I       R+ E  K+ +L   M  I V PD    S ++D
Sbjct: 448 FFNSIIDSHCKEGRVIESEKLFDL---MVRIGVKPDIITYSTLID 489



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 6/212 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+ ++   G + ++ T
Sbjct: 529 ISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 588

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+   T  AL +F+ +   + +          T+  +ID L K G   +AK+
Sbjct: 589 YNIILHGLCKNKLTDDALRMFQNLCLMDLKL------EARTFNIMIDALLKVGRNGEAKD 642

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L +      + PN  TY  +           E  +LF+ M D G   +    N I+ EL 
Sbjct: 643 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 702

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           + G++  A   L ++ +     +A T +  +D
Sbjct: 703 QRGEITRAGTYLSMIDEKHFSLEASTASLFID 734



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
           G + P V TY+I+IG  C   ++D       ++ +       ITF  L++G       S 
Sbjct: 81  GKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 433 VIEL-LHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            +++ L +M E++ MPD    +I++  L     S  +L
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEAL 178


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 158/475 (33%), Positives = 247/475 (52%), Gaps = 50/475 (10%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+    + LG+++   F PD  T+T++I  LC E+R+ EA     ++      P+V TYT
Sbjct: 26  RLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYT 85

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++GLC+      A+ L  +M          C P  VTY ++I GLCK     +A +LL
Sbjct: 86  VLIDGLCKGGRVDEAVALLSKMRKK-------CVPTAVTYNSLISGLCKAERASEAYDLL 138

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M      P++ TYT++I GFC +K  ++A R+F +++ +G +P+VVT++ ++D LCK 
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198

Query: 183 GKMDEASRLLDLMIQHG-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           G++ EA  L   MI+ G   P+  TYN+L+ GFC  G+++ A  L   M   G    V +
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+NG+CK   ++ A  L ++M  KG+ PDVV   +L  GL   +++  A  +  EM+
Sbjct: 259 YTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMR 318

Query: 302 RNGVAADTWTYRTFID---------------------------------GLCKNGYIVEA 328
           R   +   +TY T +D                                 GLCK     EA
Sbjct: 319 RKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEA 378

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL---PCGVLVPNVVTYSIM 385
           +EL    R  +C  D+  Y ++IDGLC+  +++ A  ++R +   P G L PN +TYS +
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP-GCL-PNSITYSTL 436

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           I GLCN G +D+AR       E   VPN+ T+++LI  F + N      ELL  M
Sbjct: 437 ITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487



 Score =  277 bits (709), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 154/443 (34%), Positives = 248/443 (55%), Gaps = 14/443 (3%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC + D VT+TSLI+GLC   R+ +A     K+   G  PDV+TYT +++ LC  +    
Sbjct: 6   SC-SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A    EEMAN N        PN VTYT +IDGLCK G VD+A  LL +M+ K + P  VT
Sbjct: 65  ARKFLEEMANRN------LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVT 117

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y S+I G C A+  +EA  L  EM+  G  P++ T+  ++   CK+ K D+A R+ + ++
Sbjct: 118 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 177

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEI 255
             G RPD  TY+ L+DG C  GR+  A +LF  M +S  C     +Y+ LI+G+C+  ++
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A++L   M   G  PDVV + TL  G  ++ +++ A+ L ++M R G+  D  T+ + 
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE-LFRSLPCGV 374
           +DGLC+   + +AV +   +R   C   +  YN+++DG C++ +LE A + +   + C  
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP- 356

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             PNVV+++IMI GLC   +  +A +L  +       P+V+ +  +I G  R  +  +  
Sbjct: 357 --PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 435 ELLHKM-KEINVMPDASIVSIVV 456
            +  KM +E   +P++   S ++
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLI 437



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/411 (32%), Positives = 219/411 (53%), Gaps = 10/411 (2%)

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
           C  D  TYT+L+ GLC+      AL    +M +          P+  TYT +I  LC E 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFH------PDVYTYTAVIHALCVEN 60

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            + +A++ L +M ++N+ PNVVTYT +I G C     +EA  L  +M  + V P  VT+N
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            ++  LCK  +  EA  LL+ M+  G  PD FTY TL+ GFC + + + A  +F  + + 
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIHNTLFVGLFEIHQVER 292
           G +  V +YS LI+G CK   ++ A+ L+  M+  G   P+ V +N+L  G   + +++ 
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  L + M   G + D  TY T ++G CK   + +A +L + +       D+  + SL+D
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GLC+  RL  A+ +   +      P V TY+ ++ G C   Q+++AR   L  EE    P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML--EEMDCPP 357

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           NV++F+++IRG  ++N  S+ +EL+ + +     PD  + + V+D L + +
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 178/400 (44%), Gaps = 100/400 (25%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L ++ K C  P AVT+ SLI GLC   R  EA  L  ++   GC PD+FTY
Sbjct: 95  GRVDEAVALLSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTY 153

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV--------------------------- 94
           TTL+ G C++  +  AL +FE++        VV                           
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
              C PNTVTY ++I G C+ G +D+A  LL +M +    P+VVTYT+++ GFC     +
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A  L  +M  +G+ P+VVTF  +MD LC+  ++ +A  +L  M +    P  +TYNT+L
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK-------------------- 251
           DG+C   ++  A++    +E M C   V S++I+I G CK                    
Sbjct: 334 DGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCN 391

Query: 252 ---------------NKEIEGALSLYSEMLS----------------------------- 267
                           K+++ A  +Y +ML                              
Sbjct: 392 PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARG 451

Query: 268 ---KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
              KG  P++  +N L     + ++ E A +L D+M + G
Sbjct: 452 YIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 149/270 (55%), Gaps = 13/270 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++     +L R+ ++  +PD VT+T+L+ G C  +R+ +A  L  ++   G  PDV T
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T+L++GLCR +    A+++  EM   +      C P   TY TI+DG C+   +++A++
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKS------CSPTVYTYNTILDGYCRANQLEEARK 347

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            +L+  D    PNVV++  +IRG C     +EA  L  E   +   P+VV +  ++D LC
Sbjct: 348 FMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC 405

Query: 181 KNGKMDEASRLLDLMIQH-GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           +  K+DEA R+   M++  G  P++ TY+TL+ G C  G ++ A+         GC   +
Sbjct: 406 REKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNI 461

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKG 269
            +Y++LI+ + K    E A  L  +M+ +G
Sbjct: 462 GTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 1/170 (0%)

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           N  +AD  TY + I GLCK   + +A+     +       D+  Y ++I  LC   RL  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A +    +    L PNVVTY+++I GLC  G++D+A  L   M +  V P  +T++ LI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           G  +    S+  +LL +M     +PD    + ++    K++ S ++L  F
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  277 bits (709), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 154/470 (32%), Positives = 249/470 (52%), Gaps = 31/470 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT++ L+  LC   R MEA  +F  +   G +P++ TY TL+ G   T   +V ++ 
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHG 357

Query: 81  FEEMANGNG------EFGV-VC-----------------------EPNTVTYTTIIDGLC 110
             ++   NG       F + +C                        PN VTY  +I  LC
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G V+ A     QM D+ + P  + Y S+I G C    W  A+ L +EM+D+G+  N +
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN I+D  CK G++ E+ +L +LM++ GV+P+  TYNTL++G+CL G+++ A +L   M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G K    +YS LINGYCK   +E AL L+ EM S G+ PD++ +N +  GLF+  + 
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L+  +  +G   +  TY   + GLCKN    +A+++F  L ++  + + R +N +
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ID L K GR + A +LF +     LVPN  TY +M   +   G +++   LFL ME+N  
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
             +    + ++R  ++  E ++    L  + E +   +AS  S+ +DLL+
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS 767



 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 272/542 (50%), Gaps = 74/542 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+ FT L+KGLCA+ R  +A  +   ++   GC P+VF+
Sbjct: 101 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFS 160

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC  + +  AL L   MA+  G       P+ V+YTT+I+G  KEG  DKA  
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVINGFFKEGDSDKAYS 217

Query: 121 LLLQMKDKNIKPNVVTYTSVI-----------------------------------RGFC 145
              +M D+ I P+VVTY S+I                                    G+C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            +    EA     +M   GV+P+VVT++++MD LCKNG+  EA ++ D M + G++P+  
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TY TLL G+   G +     L   M   G     + +SILI  Y    +++ A+ ++S+M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397

Query: 266 LSKGIKPDVV-----------------------------------IHNTLFVGLFEIHQV 290
             +G+ P+ V                                   ++N+L  GL   ++ 
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           ERA +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +  +  + ++  YN+L
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I+G C +G+++ A++L   +    L PN VTYS +I G C   +M+ A  LF +ME + V
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            P++IT++++++G  +    +   EL  ++ E     + S  +I++  L KN+++ ++L 
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 471 SF 472
            F
Sbjct: 638 MF 639



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 147/303 (48%), Gaps = 6/303 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + + F S+I   C E R++E+  LF  +   G +P+V TY TL+NG C       A+ L 
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M +      V  +PNTVTY+T+I+G CK   ++ A  L  +M+   + P+++TY  ++
Sbjct: 535 SGMVS------VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G    +    AK L++ + + G Q  + T+N+I+  LCKN   D+A ++   +    ++
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +A T+N ++D     GR + AK+LFV+  S G     ++Y ++         +E    L
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M   G   D  + N +   L +  ++ RA      +     + +  T   FID L  
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768

Query: 322 NGY 324
             Y
Sbjct: 769 GKY 771



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 164/369 (44%), Gaps = 43/369 (11%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG---VRPDAFTYN 208
           +A+ +F E++ +G   ++   N  + ++ ++      SR  + M + G   V PD  TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRY-NRMARAGADEVTPDLCTYG 91

Query: 209 -----------------------------------TLLDGFCLTGRVNHAKELFV-SMES 232
                                               LL G C   R + A ++ +  M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK---GIKPDVVIHNTLFVGLFEIHQ 289
           +GC   VFSY+IL+ G C     + AL L   M      G  PDVV + T+  G F+   
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            ++A+  + EM   G+  D  TY + I  LCK   + +A+E+ +T+       D   YNS
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++ G C SG+ + A+   + +    + P+VVTYS+++  LC +G+  +AR +F  M +  
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + P + T+  L++G+       ++  LL  M    + PD  + SI++   A       ++
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAM 391

Query: 470 PSFTVHEQQ 478
             F+   QQ
Sbjct: 392 LVFSKMRQQ 400



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+ ++   G + ++ T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+   T  AL +F+ +   + +          T+  +ID L K G  D+AK+
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKL------EARTFNIMIDALLKVGRNDEAKD 672

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L +      + PN  TY  +           E  +LF+ M D G   +    N I+ EL 
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 732

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           + G++  A   L ++ +     +A T +  +D
Sbjct: 733 QRGEITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  277 bits (709), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 154/470 (32%), Positives = 249/470 (52%), Gaps = 31/470 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT++ L+  LC   R MEA  +F  +   G +P++ TY TL+ G   T   +V ++ 
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHG 357

Query: 81  FEEMANGNG------EFGV-VC-----------------------EPNTVTYTTIIDGLC 110
             ++   NG       F + +C                        PN VTY  +I  LC
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G V+ A     QM D+ + P  + Y S+I G C    W  A+ L +EM+D+G+  N +
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN I+D  CK G++ E+ +L +LM++ GV+P+  TYNTL++G+CL G+++ A +L   M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G K    +YS LINGYCK   +E AL L+ EM S G+ PD++ +N +  GLF+  + 
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L+  +  +G   +  TY   + GLCKN    +A+++F  L ++  + + R +N +
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ID L K GR + A +LF +     LVPN  TY +M   +   G +++   LFL ME+N  
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
             +    + ++R  ++  E ++    L  + E +   +AS  S+ +DLL+
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS 767



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 165/542 (30%), Positives = 273/542 (50%), Gaps = 74/542 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+ FT L+KGLCA+ R  +A  +   ++   GC P+VF+
Sbjct: 101 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFS 160

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC  + +  AL L   MA+  G       P+ V+YTT+I+G  KEG  DKA  
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVINGFFKEGDSDKAYS 217

Query: 121 LLLQMKDKNIKPNVVTYTSVI-----------------------------------RGFC 145
              +M D+ I P+VVTY S+I                                    G+C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            +    EA     +M   GV+P+VVT++++MD LCKNG+  EA ++ D M + G++P+  
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TY TLL G+   G +     L   M   G     + +SILI  Y K  +++ A+ ++S+M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397

Query: 266 LSKGIKPDVV-----------------------------------IHNTLFVGLFEIHQV 290
             +G+ P+ V                                   ++N+L  GL   ++ 
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           ERA +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +  +  + ++  YN+L
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I+G C +G+++ A++L   +    L PN VTYS +I G C   +M+ A  LF +ME + V
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            P++IT++++++G  +    +   EL  ++ E     + S  +I++  L KN+++ ++L 
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 471 SF 472
            F
Sbjct: 638 MF 639



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 147/303 (48%), Gaps = 6/303 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + + F S+I   C E R++E+  LF  +   G +P+V TY TL+NG C       A+ L 
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M +      V  +PNTVTY+T+I+G CK   ++ A  L  +M+   + P+++TY  ++
Sbjct: 535 SGMVS------VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G    +    AK L++ + + G Q  + T+N+I+  LCKN   D+A ++   +    ++
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +A T+N ++D     GR + AK+LFV+  S G     ++Y ++         +E    L
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M   G   D  + N +   L +  ++ RA      +     + +  T   FID L  
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768

Query: 322 NGY 324
             Y
Sbjct: 769 GKY 771



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 165/369 (44%), Gaps = 43/369 (11%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG---VRPDAFTYN 208
           +A+ +F E++ +G   ++   N  + ++ ++      SR  + M + G   V PD  TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRY-NRMARAGADEVTPDLCTYG 91

Query: 209 -----------------------------------TLLDGFCLTGRVNHAKELFV-SMES 232
                                               LL G C   R + A ++ +  M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK---GIKPDVVIHNTLFVGLFEIHQ 289
           +GC   VFSY+IL+ G C     + AL L   M      G  PDVV + T+  G F+   
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            ++A+  + EM   G+  D  TY + I  LCK   + +A+E+ +T+       D   YNS
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++ G C SG+ + A+   + +    + P+VVTYS+++  LC +G+  +AR +F  M +  
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + P + T+  L++G+       ++  LL  M    + PD  + SI++   AK      ++
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391

Query: 470 PSFTVHEQQ 478
             F+   QQ
Sbjct: 392 LVFSKMRQQ 400



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+ ++   G + ++ T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+   T  AL +F+ +   + +          T+  +ID L K G  D+AK+
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKL------EARTFNIMIDALLKVGRNDEAKD 672

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L +      + PN  TY  +           E  +LF+ M D G   +    N I+ EL 
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 732

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           + G++  A   L ++ +     +A T +  +D
Sbjct: 733 QRGEITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 167/542 (30%), Positives = 269/542 (49%), Gaps = 75/542 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+ FT L+KGLCA+ R  +A  +   ++   GC P+VF+
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC  + +  AL L + M +  G+    C P+ V+YTT+I+G  KEG +DKA  
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I PNVVTY S+I   C A+  ++A  +   M+  GV PN  T+N I+   C
Sbjct: 221 TYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G+  EA   L  M   GV PD  TYN+L+D  C  GR   A+++F SM   G K  + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 241 SY-----------------------------------SILINGYCKNKEIEGALSLYSEM 265
           +Y                                   SILI  Y K  +++ A+ ++S+M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD--------------------------- 298
             +G+ PD V + T+   L +  +VE A + F+                           
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 299 --------EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
                   EM   G+  DT  + + ID  CK G ++E+ +LF  +  +  + +I  Y++L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTL 520

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           IDG C +G+++ A +L  S+    + P+ VTY+ +I G C   +M+ A  LF +ME + V
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            P++IT++++++G  +    +   EL   + E     + S  +I++  L KN ++  +L 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 471 SF 472
            F
Sbjct: 641 MF 642



 Score =  274 bits (700), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 160/470 (34%), Positives = 253/470 (53%), Gaps = 31/470 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ SL+  LC   R  EA  +F  +   G +P++ TY TL+ G   T   +V ++ 
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHG 360

Query: 81  FEEMANGNG------EFGV-VC-----------------------EPNTVTYTTIIDGLC 110
             ++   NG       F + +C                        P+TVTY T+I  LC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G V+ A     QM D+ + P  + Y S+I   C    W++AK L +EM+D+G+  + +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN I+D  CK G++ E+ +L DLM++ GV+P+  TY+TL+DG+CL G+++ A +L  SM
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G K    +Y+ LINGYCK   +E AL L+ EM S G+ PD++ +N +  GLF+  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L+  +  +G   +  TY   + GLCKN    EA+ +F  L +   + + R +N +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I  L K GR + A +LF +L    LVP+V TYS+M   L   G +++  DLFL MEEN  
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
             N    + ++R  ++  + ++    L  + E +   +AS  S+ +DLL+
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLS 770



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 201/455 (44%), Gaps = 42/455 (9%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  +F +L   G    ++     +  + R S    A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  +I   C  G +D     L  +  K  + + + +T +++G C  K  ++A  + +  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 161 MDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLT 217
           M Q G  PNV ++N+++  LC   +  EA  LL +M   G    PD  +Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G ++ A   +  M   G    V +Y+ +I   CK + ++ A+ + + M+  G+ P+   +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++  G     Q + A     +M  +GV  D  TY + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 338 LKCEFDIRAYNSLIDG--------------------------------LC---KSGRLEI 362
              + +I  Y +L+ G                                +C   K G+++ 
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+ +F  +    L P+ VTY  +IG LC  G+++ A   F  M +  + P  I ++ LI 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
                ++  K  EL+ +M +  +  D    + ++D
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 145/303 (47%), Gaps = 6/303 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D + F S+I   C E R++E+  LF  +   G +P++ TY+TL++G C       A  L 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLL 537

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M +      V  +P+ VTY T+I+G CK   ++ A  L  +M+   + P+++TY  ++
Sbjct: 538 ASMVS------VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G    +    AK L++ + + G Q  + T+N+I+  LCKN   DEA R+   +    ++
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +  T+N ++      GR + AK+LF ++ + G    V +YS++     +   +E    L
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M   G   +  + N++   L +   + RA      +     + +  T   F+D L  
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771

Query: 322 NGY 324
             Y
Sbjct: 772 GKY 774



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+  +   G + ++ T
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+ + T  AL +F+ +   + +        T T+  +I  L K G  D+AK+
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKVGRNDEAKD 675

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   +    + P+V TY+ +           E   LF+ M + G   N    N I+ +L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           + G +  A   L ++ +     +A T +  LD
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/489 (33%), Positives = 256/489 (52%), Gaps = 31/489 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   + +    PD VT + L+  LC   +I EA  +F  + + G  PDVF+Y
Sbjct: 306 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 365

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGVV--------------------- 94
             ++NG       +   +LF+ M  G+G       F V+                     
Sbjct: 366 NIMLNGYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 424

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +P+ VTY T+I  LC+ G +D A E   QM D+ + P+   Y  +I+GFC      
Sbjct: 425 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 484

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +AK L  E+M+ G+  ++V F+ I++ LCK G++ +A  + DL +  G+ PDA  YN L+
Sbjct: 485 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 544

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+CL G++  A  +F +M S G +  V  Y  L+NGYCK   I+  LSL+ EML +GIK
Sbjct: 545 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIK 604

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P  ++++ +  GLFE  +   A   F EM  +G+A D  TY   + GL KN    EA+ L
Sbjct: 605 PSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 664

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  LR +  + +I   N++IDG+ ++ R+E A +LF S+    LVP+VVTYSIMI  L  
Sbjct: 665 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 724

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G +++A D+F  M+     PN    + ++R  ++ NE  +    L K+ E N   +   
Sbjct: 725 EGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 784

Query: 452 VSIVVDLLA 460
             ++VDL +
Sbjct: 785 AMLLVDLFS 793



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 153/493 (31%), Positives = 244/493 (49%), Gaps = 40/493 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R        G++L++    + +    L++G C   R  EA   L  +    GC PDVF+Y
Sbjct: 129 RPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSY 188

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+  LC    +  A +L   MA G    G VC PN V Y T+IDG  KEG V+KA +L
Sbjct: 189 SILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPNVVAYNTVIDGFFKEGDVNKACDL 244

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK--------------------------------- 148
             +M  + I P++VTY SV+   C A+                                 
Sbjct: 245 FKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSS 304

Query: 149 --DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W EA R+F EM    + P+VVT +++M  LCK GK+ EA  + D M   G  PD F+
Sbjct: 305 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 364

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YN +L+G+   G +    +LF  M   G     +++++LI  Y     ++ A+ +++EM 
Sbjct: 365 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 424

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G+KPDVV + T+   L  I +++ A + F++M   GVA D + Y   I G C +G ++
Sbjct: 425 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 484

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A EL   +       DI  ++S+I+ LCK GR+  A  +F       L P+ V Y++++
Sbjct: 485 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 544

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G C  G+M+KA  +F  M    + PNV+ +  L+ G+ +I    + + L  +M +  + 
Sbjct: 545 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIK 604

Query: 447 PDASIVSIVVDLL 459
           P   + SI++D L
Sbjct: 605 PSTILYSIIIDGL 617



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 194/383 (50%), Gaps = 5/383 (1%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR+   + A+ LF   A+   +   V  P + TY  ++D   +    + A     Q+   
Sbjct: 86  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 143

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDE 187
            ++ N++    ++ GFC AK  +EA  + +    + G  P+V ++++++  LC  GK  +
Sbjct: 144 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 203

Query: 188 ASRLLDLMIQHGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           A  LL +M + G    P+   YNT++DGF   G VN A +LF  M   G    + +Y+ +
Sbjct: 204 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 263

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++  CK + ++ A +   +M++K + P+   +N L  G     Q + A ++F EM+R+ +
Sbjct: 264 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 323

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D  T    +  LCK G I EA ++F T+ +     D+ +YN +++G    G L    +
Sbjct: 324 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 383

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           LF  +    + P+  T++++I    N G +DKA  +F +M ++ V P+V+T+  +I    
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 443

Query: 426 RINEPSKVIELLHKMKEINVMPD 448
           RI +    +E  ++M +  V PD
Sbjct: 444 RIGKMDDAMEKFNQMIDQGVAPD 466



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 164/338 (48%), Gaps = 9/338 (2%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P   TY  ++     A     A   F +++  G++ N++  N +++  C+  + DEA 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA- 168

Query: 190 RLLDLMIQH----GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYS 243
             LD+++      G  PD F+Y+ LL   C  G+   A +L   M   G  C   V +Y+
Sbjct: 169 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 226

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +I+G+ K  ++  A  L+ EM+ +GI PD+V +N++   L +   +++A     +M   
Sbjct: 227 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 286

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
            V  + WTY   I G    G   EAV +F  +R      D+   + L+  LCK G+++ A
Sbjct: 287 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 346

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++F ++      P+V +Y+IM+ G    G +    DLF  M  + + P+  TF++LI+ 
Sbjct: 347 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 406

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +       K + + ++M++  V PD      V+  L +
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 444



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 158/336 (47%), Gaps = 11/336 (3%)

Query: 2   GRVSHGFVV-----LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG ++     +  I+ +    D V F+S+I  LC   R+M+A  +F      G  P
Sbjct: 476 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 535

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D   Y  L++G C       AL +F+ M +         EPN V Y T+++G CK G +D
Sbjct: 536 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG------IEPNVVGYGTLVNGYCKIGRID 589

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +   L  +M  + IKP+ + Y+ +I G   A     AK  F EM + G+  ++ T+N+++
Sbjct: 590 EGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVL 649

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L KN   DEA  L   +    V+ +  T NT++DG   T RV  AK+LF S+      
Sbjct: 650 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 709

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
            +V +YSI+I    K   +E A  ++S M + G +P+  + N +   L + +++ RA   
Sbjct: 710 PSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAY 769

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
             ++     + +  T    +D     G   E +   
Sbjct: 770 LSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 157/328 (47%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++        +++     PD   +  LI+G C    +++A  L +++   G   D+  
Sbjct: 445 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 504

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +++++N LC+    + A N+F+   N      V   P+ V Y  ++DG C  G ++KA  
Sbjct: 505 FSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYNMLMDGYCLVGKMEKALR 558

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    I+PNVV Y +++ G+C     +E   LF EM+ +G++P+ + +++I+D L 
Sbjct: 559 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 618

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+   A      M + G+  D  TYN +L G       + A  LF  + +M  K  + 
Sbjct: 619 EAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 678

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + + +I+G  + + +E A  L++ +    + P VV ++ +   L +   VE A  +F  M
Sbjct: 679 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 738

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           Q  G   ++      +  L K   IV A
Sbjct: 739 QNAGCEPNSRLLNHVVRELLKKNEIVRA 766


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/332 (42%), Positives = 205/332 (61%), Gaps = 6/332 (1%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G +PDV TYTT++NGLC+   T+ A  LF++M    GE G  C+P+ VTY+TIID LCK+
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKM----GEAG--CQPDVVTYSTIIDSLCKD 58

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
             V++A ++   MK K I PN+ TY S+I+G C    W EA  +  EMM   + PN+VTF
Sbjct: 59  RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 118

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           +++++  CK G + EA  +L  M + GV P+  TY++L++G+ L   V  A++LF  M +
Sbjct: 119 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMIT 178

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            GCK  VFSY+ILINGYCK K I  A  L++EM+ +G+ PD+V +NTL  GL ++ ++  
Sbjct: 179 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 238

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  LF  M  NG   D  TY   +DG CK GY+ +A  LF  ++    + ++  YN LID
Sbjct: 239 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 298

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
            +CKS  L+ A +LF  L    L PN+  + +
Sbjct: 299 AMCKSRNLKEARKLFSELFVQGLQPNMKHWKL 330



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/319 (36%), Positives = 181/319 (56%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           +P+  TYTTII+GLCK G    A  L  +M +   +P+VVTY+++I   C  +  NEA  
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F  M  +G+ PN+ T+N ++  LC   +  EAS +L+ M+   + P+  T++ L++ FC
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G V  A+ +  +M  MG +  V +YS L+NGY    E+  A  L+  M++KG KPDV 
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N L  G  +  ++  A +LF+EM   G+  D  +Y T IDGLC+ G + EA +LF  +
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 246

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                  D+  Y+ L+DG CK G L  A  LFR++    L PN+V Y+I+I  +C    +
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 306

Query: 396 DKARDLFLDMEENAVVPNV 414
            +AR LF ++    + PN+
Sbjct: 307 KEARKLFSELFVQGLQPNM 325



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/318 (35%), Positives = 176/318 (55%), Gaps = 8/318 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + PD  T+T++I GLC     + AA LF K+   GC+PDV TY+T+++ LC+      AL
Sbjct: 6   YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65

Query: 79  NLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           ++F  M A G         PN  TY ++I GLC      +A  +L +M   NI PN+VT+
Sbjct: 66  DIFSYMKAKG-------ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 118

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           + +I  FC   +  EA+ +   M + GV+PNVVT++ +M+      ++ EA +L D+MI 
Sbjct: 119 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMIT 178

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G +PD F+YN L++G+C   R+  AK+LF  M   G    + SY+ LI+G C+   +  
Sbjct: 179 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 238

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L+  ML+ G  PD+  ++ L  G  +   + +AF+LF  MQ   +  +   Y   ID
Sbjct: 239 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 298

Query: 318 GLCKNGYIVEAVELFHTL 335
            +CK+  + EA +LF  L
Sbjct: 299 AMCKSRNLKEARKLFSEL 316



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 177/295 (60%), Gaps = 6/295 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT++++I  LC + R+ EA  +F+ ++  G  P++FTY +L+ GLC  S    A  +
Sbjct: 43  PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM 102

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM + N        PN VT++ +I+  CKEG V +A+ +L  M +  ++PNVVTY+S+
Sbjct: 103 LNEMMSLN------IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSL 156

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G+    +  EA++LF  M+ +G +P+V ++N++++  CK  ++ EA +L + MI  G+
Sbjct: 157 MNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 216

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  +YNTL+DG C  GR+  A +LF +M + G    + +YSIL++G+CK   +  A  
Sbjct: 217 TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFR 276

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           L+  M S  +KP++V++N L   + +   ++ A KLF E+   G+  +   ++ F
Sbjct: 277 LFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 169/297 (56%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M  +  +P+V TYT++I G C   +   A  LF +M + G QP+VVT++ I+D LCK+ +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           ++EA  +   M   G+ P+ FTYN+L+ G C   R   A  +   M S+     + ++S+
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +CK   +  A  +   M   G++P+VV +++L  G     +V  A KLFD M   G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D ++Y   I+G CK   I EA +LF+ +       DI +YN+LIDGLC+ GRL  A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +LF+++     +P++ TYSI++ G C  G + KA  LF  M+   + PN++ +++LI
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 168/294 (57%), Gaps = 11/294 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV+    +   +     +P+  T+ SLI+GLC  SR  EA+A+  ++      P++ T++
Sbjct: 60  RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 119

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+N  C+  +   A  + + M     E GV  EPN VTY+++++G   +  V +A++L 
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMT----EMGV--EPNVVTYSSLMNGYSLQAEVFEARKLF 173

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  K  KP+V +Y  +I G+C AK   EAK+LF EM+ QG+ P++V++N ++D LC+ 
Sbjct: 174 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 233

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++ EA  L   M+ +G  PD  TY+ LLDGFC  G +  A  LF +M+S   K  +  Y
Sbjct: 234 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 293

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           +ILI+  CK++ ++ A  L+SE+  +G++P     N     LFEI +   A ++
Sbjct: 294 NILIDAMCKSRNLKEARKLFSELFVQGLQP-----NMKHWKLFEIWKRMAALRM 342



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 165/304 (54%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+ +G QP+V T+  I++ LCK G+   A+ L   M + G +PD  TY+T++D  C   R
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           VN A ++F  M++ G    +F+Y+ LI G C       A ++ +EM+S  I P++V  + 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L     +   V  A  +   M   GV  +  TY + ++G      + EA +LF  +    
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C+ D+ +YN LI+G CK+ R+  A +LF  +    L P++V+Y+ +I GLC  G++ +A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           DLF +M  N  +P++ T+ +L+ GF +    +K   L   M+   + P+  + +I++D +
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 460 AKNE 463
            K+ 
Sbjct: 301 CKSR 304



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 109/202 (53%), Gaps = 6/202 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     VL  + +    P+ VT++SL+ G   ++ + EA  LF  +   GC+PDVF+Y
Sbjct: 129 GNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSY 188

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+      A  LF EM +          P+ V+Y T+IDGLC+ G + +A +L
Sbjct: 189 NILINGYCKAKRIGEAKQLFNEMIHQG------LTPDIVSYNTLIDGLCQLGRLREAHDL 242

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M      P++ TY+ ++ GFC      +A RLF  M    ++PN+V +N+++D +CK
Sbjct: 243 FKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCK 302

Query: 182 NGKMDEASRLLDLMIQHGVRPD 203
           +  + EA +L   +   G++P+
Sbjct: 303 SRNLKEARKLFSELFVQGLQPN 324



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 20/84 (23%), Positives = 43/84 (51%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +   +L +   PD  T++ L+ G C +  + +A  LF  ++    +P++  
Sbjct: 233 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 292

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM 84
           Y  L++ +C++ +   A  LF E+
Sbjct: 293 YNILIDAMCKSRNLKEARKLFSEL 316


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/451 (34%), Positives = 241/451 (53%), Gaps = 15/451 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ +LI  LC    + EA  L   +   GC P+V TY+ L+NGLC+      A  L
Sbjct: 70  PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 129

Query: 81  FEEMANGNGEFGVVCE--PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK--PNVVT 136
            +EM   +      C+  PN +TY + +DGLCK+    +A EL+  ++D +++  P+ VT
Sbjct: 130 IQEMTRKS------CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           ++++I G C     +EA  +F +M+  G  PNV+T+N +++ LCK  KM+ A  +++ M+
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF-----SYSILINGYCK 251
             GV PD  TY+ L+D FC   RV+ A EL   M S GC   V      +++ILI G CK
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
               E A +L+ EM++K ++PDV+    L  GL +  QVE A  + D M   GV  +  T
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   + GLCK+G I EA +    +    C  D   Y SL+  LC++ R + AL+L   L 
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                P+ VTY+I++ GL   G+ ++A  +  +M      P+  TF     G  R    +
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLA 483

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             +ELL  +    ++PDA+  S ++D + ++
Sbjct: 484 GTMELLRVVLAKGMLPDATTCSSILDWVCRS 514



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/402 (35%), Positives = 214/402 (53%), Gaps = 16/402 (3%)

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           V  Y  ++  LCR   T  AL +F  EMA      GV   P  VTY TII+GLCK   + 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARD----GVA--PTIVTYNTIINGLCKSNDLG 54

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
              EL  ++ ++   P+VVTY ++I   C A D  EA+RL  +M  +G  PNVVT++V++
Sbjct: 55  AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLI 114

Query: 177 DELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLTGRVNHAKELFVSME--S 232
           + LCK G++DEA  L+  M +    V P+  TYN+ LDG C       A EL  S+   S
Sbjct: 115 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 174

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           +       ++S LI+G CK  +I+ A S++ +M++ G  P+V+ +N L  GL +  ++ER
Sbjct: 175 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 234

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR-----AY 347
           A  + + M   GV  D  TY   +D  CK   + EA+EL H +    C  ++       +
Sbjct: 235 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTF 294

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N LI G CK+G  E A  LF  +    L P+V+T+  +I GLC  GQ++ ARD+   M  
Sbjct: 295 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 354

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
             V PNV+T++ L+ G  +     +  + L +M     +PD+
Sbjct: 355 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 396



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/347 (35%), Positives = 190/347 (54%), Gaps = 11/347 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD VTF++LI GLC   +I EA ++F  +   G  P+V TY  LVNGLC+      A  
Sbjct: 178 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 237

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV----- 134
           + E M +     GV   P+ +TY+ ++D  CK   VD+A ELL  M  +   PNV     
Sbjct: 238 MIESMVDK----GVT--PDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           VT+  +I G C A ++ +A  LF EM+ + +QP+V+TF  ++D LCK G+++ A  +LDL
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 351

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   GV P+  TYN L+ G C +GR+  A +    M S GC     +Y  L+   C+   
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASR 411

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            + AL L SE+ S G  PD V +N L  GL++  + E+A  + +EM   G   D++T+  
Sbjct: 412 TDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 471

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              GL ++G +   +EL   +       D    +S++D +C+SG+L+
Sbjct: 472 CFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLD 518



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 172/324 (53%), Gaps = 1/324 (0%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     V   ++   + P+ +T+ +L+ GLC   ++  A A+   +   G  PDV TY
Sbjct: 195 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 254

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + LV+  C+ S    AL L   MA+  G    V  P+ VT+  +I G CK G  ++A  L
Sbjct: 255 SVLVDAFCKASRVDEALELLHGMAS-RGCTPNVLVPDKVTFNILIAGACKAGNFEQASAL 313

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  KN++P+V+T+ ++I G C A     A+ +   M + GV PNVVT+N ++  LCK
Sbjct: 314 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 373

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+++EA + L+ M+  G  PD+ TY +L+   C   R + A +L   ++S G      +
Sbjct: 374 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 433

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+IL++G  K+ + E A+++  EM+ KG +PD       F GL     +    +L   + 
Sbjct: 434 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVL 493

Query: 302 RNGVAADTWTYRTFIDGLCKNGYI 325
             G+  D  T  + +D +C++G +
Sbjct: 494 AKGMLPDATTCSSILDWVCRSGKL 517


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/419 (36%), Positives = 239/419 (57%), Gaps = 8/419 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + VT + LI   C   ++  + +L  K+   G  P+  T+TTL+ GLC        L+  
Sbjct: 44  NLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFH 103

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +++           + N V+Y T+++GLCK G    A +LL  ++D++ +PNVV Y+++I
Sbjct: 104 DKVV------AQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAII 157

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C  K  NEA  L+ EM  + + PNV+T+N ++   C  G++  A  LL  MI   + 
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNIN 217

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD +T++ L+D  C  G+  +AK++F +M  MG    V+SY+I+ING CK K ++ A++L
Sbjct: 218 PDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 275

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EML K + PD V +N+L  GL +  ++  A  L +EM   G  AD  TY + +D LCK
Sbjct: 276 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 335

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           N  + +A  LF  ++    +  +  Y +LIDGLCK GRL+ A ELF+ L       +V T
Sbjct: 336 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWT 395

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           Y++MI GLC +G  D+A  +   ME+N  +PN +TF+++IR     +E  K  +LLH+M
Sbjct: 396 YTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 223/405 (55%), Gaps = 8/405 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F +LG+ILK  + P+ +T+T+L+KGLC +  + +      K+     + +  +
Sbjct: 58  LGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVS 117

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+T  T  A+ L   + + +        PN V Y+ IIDGLCK+  V++A +
Sbjct: 118 YGTLLNGLCKTGETRCAIKLLRMIEDRST------RPNVVMYSAIIDGLCKDKLVNEAYD 171

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I PNV+TY ++I  FC A     A  L  EM+ + + P+V TF++++D LC
Sbjct: 172 LYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALC 231

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK   A ++   M+Q GV P+ ++YN +++G C   RV+ A  L   M          
Sbjct: 232 KEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 289

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G CK+  I  AL+L +EM  +G   DVV + +L   L +   +++A  LF +M
Sbjct: 290 TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 349

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G+    +TY   IDGLCK G +  A ELF  L +  C  D+  Y  +I GLCK G  
Sbjct: 350 KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMF 409

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           + AL +   +     +PN VT+ I+I  L    + DKA  L  +M
Sbjct: 410 DEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 180/362 (49%), Gaps = 2/362 (0%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           + +  I+  L K  +      L  QM  K I+ N+VT + +I  FC+      +  L  +
Sbjct: 11  IEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGK 70

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           ++  G  PN +T+  +M  LC  G++ +     D ++    + +  +Y TLL+G C TG 
Sbjct: 71  ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE 130

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
              A +L   +E    +  V  YS +I+G CK+K +  A  LYSEM ++ I P+V+ +NT
Sbjct: 131 TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNT 190

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L        Q+  AF L  EM    +  D +T+   ID LCK G    A ++FH +  + 
Sbjct: 191 LICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMG 248

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              ++ +YN +I+GLCK  R++ A+ L R +    +VP+ VTY+ +I GLC  G++  A 
Sbjct: 249 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 308

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +L  +M       +V+T+  L+    +     K   L  KMKE  + P     + ++D L
Sbjct: 309 NLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 368

Query: 460 AK 461
            K
Sbjct: 369 CK 370



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 99/285 (34%), Positives = 159/285 (55%), Gaps = 8/285 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ +T+ +LI   C   ++M A +L  ++ +    PDV+T++ L++ LC+      A  +
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN--AKQI 240

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  M     + GV   PN  +Y  +I+GLCK   VD+A  LL +M  KN+ P+ VTY S+
Sbjct: 241 FHAMV----QMGV--NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 294

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C +     A  L  EM  +G   +VVT+  ++D LCKN  +D+A+ L   M + G+
Sbjct: 295 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 354

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P  +TY  L+DG C  GR+ +A+ELF  +   GC   V++Y+++I+G CK    + AL+
Sbjct: 355 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 414

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           + S+M   G  P+ V    +   LFE  + ++A KL  EM   G+
Sbjct: 415 IKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 70/153 (45%)

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           +   +  L K  Y +  + L   + +   E ++   + LI+  C  G++  +  L   + 
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                PN +T++ ++ GLC  G++ K       +   A   N +++  L+ G  +  E  
Sbjct: 73  KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             I+LL  +++ +  P+  + S ++D L K+++
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKL 165


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 155/446 (34%), Positives = 250/446 (56%), Gaps = 11/446 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P  VT+ +L+ GL    ++  A ALF ++ +     DV ++  LV GLCR      AL 
Sbjct: 42  SPSMVTYNTLLDGLFRTGKLERAMALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALE 100

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            F +M +        C PN +TY+ +IDGLCK   V +A ELL  MK +   P+V+TYT 
Sbjct: 101 FFRKMDDR-------CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTI 153

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G C       A  +  EM+D G  PN+VT+N ++  LC+  ++ +A  L+  M   G
Sbjct: 154 LVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG 213

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TY TL+DG C  GRV  A  +   M   G    +  Y++LING CK  +++ ++
Sbjct: 214 CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI 273

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +L    +S GIKPDVV ++++  GL   ++++ A +L   ++  G   D   Y T IDGL
Sbjct: 274 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 333

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA-LELFRSLPCGVLVPN 378
           CK G + EA +L+  +    C+ D+  Y++LIDGLCK+GR++ A L L R +  G   P+
Sbjct: 334 CKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGT-PPS 392

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE-PSKVIELL 437
            +TY+ +I GLC+   +D+A +L  +ME +   P+ +T+++LI G  R+    S  ++  
Sbjct: 393 TMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYF 452

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNE 463
            +M +  V+PD    SI+++ L K++
Sbjct: 453 QEMIDNGVIPDHITYSILLEGLKKSK 478



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/443 (33%), Positives = 241/443 (54%), Gaps = 8/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+ SLI GLC  +    A  LF  ++   C P + TY TL++GL RT     A+ L
Sbjct: 8   PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+EM +           + +++  ++ GLC+ G ++ A E   +M D+   PNV+TY+ +
Sbjct: 68  FQEMLDRRSH-------DVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVL 119

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C A   ++A  L   M  +G  P+V+T+ +++D LCK  K+  A  +L  M+  G 
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TYN+LL G C   RV+ A  L   M   GC   V +Y  LI+G CK   ++ A +
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + ++M+ KG  PD++I+N L  GL +  QV+ +  L       G+  D  TY + I GLC
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 299

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           ++  + EA  L   ++   C  D+  Y++LIDGLCK+G+++ A +L+  +       +VV
Sbjct: 300 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVV 359

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TYS +I GLC  G++D+A  L   M      P+ +T++ LI+G   +N   + IEL+ +M
Sbjct: 360 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
           +  N  P A   +I++  + + E
Sbjct: 420 ERSNCAPSAVTYNILIHGMCRME 442



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 214/386 (55%), Gaps = 7/386 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+ +T++ LI GLC  +R+ +A  L   ++  GC PDV TYT LV+GLC+ S    A  
Sbjct: 110 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 169

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  EM +        C PN VTY +++ GLC+   V  A  L+  M  +   PNVVTY +
Sbjct: 170 VLREMLDAG------CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 223

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C      +A  +  +M+D+G  P+++ +N++++ LCK  ++DE+  LL   +  G
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           ++PD  TY++++ G C + R++ A  L + ++S GC   V  YS LI+G CK  +++ A 
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            LY  M   G   DVV ++TL  GL +  +V+ A  L   M R G    T TY + I GL
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE-IALELFRSLPCGVLVPN 378
           C   ++ EA+EL   +    C      YN LI G+C+  R++  AL+ F+ +    ++P+
Sbjct: 404 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPD 463

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLD 404
            +TYSI++ GL     + + R L LD
Sbjct: 464 HITYSILLEGLKKSKDLHELRHLVLD 489



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 196/367 (53%), Gaps = 2/367 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           CEPN VTY ++IDGLCK    D+A+EL   MK     P++VTY +++ G         A 
Sbjct: 6   CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 65

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            LF EM+D+    +V++FN+++  LC+ GK++ A      M      P+  TY+ L+DG 
Sbjct: 66  ALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGL 123

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   RV+ A EL  SM++ GC   V +Y+IL++G CK  ++  A  +  EML  G  P++
Sbjct: 124 CKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 183

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +N+L  GL    +V  A  L  +M   G   +  TY T IDGLCK G + +A  +   
Sbjct: 184 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 243

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +       D+  YN LI+GLCK+ +++ ++ L R    G + P+VVTYS +I GLC   +
Sbjct: 244 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 303

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D+A  L L ++     P+VI +  LI G  +  +  +  +L   M       D    S 
Sbjct: 304 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYST 363

Query: 455 VVDLLAK 461
           ++D L K
Sbjct: 364 LIDGLCK 370



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/321 (36%), Positives = 174/321 (54%), Gaps = 7/321 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V+  + VL  +L +   P+ VT+ SL+ GLC   R+ +A AL   +   GC P+V TY 
Sbjct: 163 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 222

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++GLC+      A  +  +M +  G       P+ + Y  +I+GLCK   VD++  LL
Sbjct: 223 TLIDGLCKVGRVKDACAMLADMIDKGG------TPDLMIYNMLINGLCKADQVDESIALL 276

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +     IKP+VVTY+SVI G C +   +EA RL + +  +G  P+V+ ++ ++D LCK 
Sbjct: 277 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 336

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+DEA  L ++M   G   D  TY+TL+DG C  GRV+ A  L   M  MG   +  +Y
Sbjct: 337 GKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 396

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER-AFKLFDEMQ 301
           + LI G C    ++ A+ L  EM      P  V +N L  G+  + +V+  A   F EM 
Sbjct: 397 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMI 456

Query: 302 RNGVAADTWTYRTFIDGLCKN 322
            NGV  D  TY   ++GL K+
Sbjct: 457 DNGVIPDHITYSILLEGLKKS 477



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 161/297 (54%), Gaps = 2/297 (0%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M D G +PNVVT+N ++D LCKN + D A  L + M      P   TYNTLLDG   TG+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           +  A  LF  M      H V S++IL+ G C+  +IE AL  + +M  +   P+V+ ++ 
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  GL + ++V +A +L + M+  G + D  TY   +DGLCK   +  A E+   +    
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C  ++  YNSL+ GLC++ R+  AL L R + C    PNVVTY  +I GLC  G++  A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +  DM +    P+++ ++MLI G  + ++  + I LL +     + PD    S V+
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 135/257 (52%), Gaps = 7/257 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +L  ++    TPD + +  LI GLC   ++ E+ AL  +    G +PDV T
Sbjct: 231 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 290

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y++++ GLCR++    A  L   + +        C P+ + Y+T+IDGLCK G VD+A +
Sbjct: 291 YSSVIYGLCRSNRLDEACRLLLYVKSRG------CPPDVILYSTLIDGLCKAGKVDEAFD 344

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M       +VVTY+++I G C A   +EA  L   M+  G  P+ +T+N ++  LC
Sbjct: 345 LYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 404

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK-ELFVSMESMGCKHTV 239
               +DEA  L++ M +    P A TYN L+ G C   RV+ A  + F  M   G     
Sbjct: 405 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDH 464

Query: 240 FSYSILINGYCKNKEIE 256
            +YSIL+ G  K+K++ 
Sbjct: 465 ITYSILLEGLKKSKDLH 481



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 7/163 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   F +   +       D VT+++LI GLC   R+ EA  L  ++   G  P   TY
Sbjct: 337 GKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 396

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK-E 120
            +L+ GLC  +H   A+ L EEM   N      C P+ VTY  +I G+C+   VD A  +
Sbjct: 397 NSLIKGLCDLNHLDEAIELVEEMERSN------CAPSAVTYNILIHGMCRMERVDSAALD 450

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
              +M D  + P+ +TY+ ++ G   +KD +E + L ++ M Q
Sbjct: 451 YFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 493


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/468 (32%), Positives = 250/468 (53%), Gaps = 9/468 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF  L  ++     PD +  TSLI+GLC   +  +A  +   L   G  PDV TY
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C+T     AL L + M+           P+ VTY TI+  LC  G + +A E+
Sbjct: 184 NVLISGYCKTGEIGSALQLLDRMS---------VSPDVVTYNTILRTLCDSGKLKEAMEV 234

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +   +   P+V+TYT +I   C      +A +L  EM D+G +P+VVT+NV+++ +CK
Sbjct: 235 LDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA R L+ M  +G +P+  T+N +L   C TGR   A++    M   GC  +V +
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILIN  C+   I  A+ +  +M   G  P+ + +N L   L +  ++ERA +  D M 
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY T +  LCK+G +  AVE+ + L    C   +  YN++IDGL K G+ +
Sbjct: 415 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTD 474

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++L   +    L P+++TYS ++GGL  +G++D+A   F D+EE  V PN IT++ ++
Sbjct: 475 DAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIM 534

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            G  +  +  + I+ L  M      P  +   I+++ LA   ++  +L
Sbjct: 535 LGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEAL 582



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 32/385 (8%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           L + G +++  + L  M  +   P+++  TS+IRG C      +A R+   + D G  P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 169 VVTFNV--------------------------------IMDELCKNGKMDEASRLLDLMI 196
           V+T+NV                                I+  LC +GK+ EA  +LD  +
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQM 239

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           Q    PD  TY  L++  C    V  A +L   M   GCK  V +Y++LING CK   ++
Sbjct: 240 QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLD 299

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+   + M S G +P+V+ HN +   +    +   A K   EM R G +    T+   I
Sbjct: 300 EAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILI 359

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           + LC+ G I  A+++   +    C  +  +YN L+  LCK  ++E A+E    +      
Sbjct: 360 NFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCY 419

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P++VTY+ ++  LC DG++D A ++   +      P +IT++ +I G  ++ +    I+L
Sbjct: 420 PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKL 479

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
           L +MK   + PD    S +V  L++
Sbjct: 480 LDEMKGKGLKPDIITYSTLVGGLSR 504



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 150/288 (52%), Gaps = 3/288 (1%)

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  L +NG+++E  + L+ M+  G  PD     +L+ G C TG+   A  +   +E  G 
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +Y++LI+GYCK  EI  AL L   M    + PDVV +NT+   L +  +++ A +
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + D   +     D  TY   I+  CK   + +A++L   +R   C+ D+  YN LI+G+C
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K GRL+ A+     +P     PNV+T++I++  +C+ G+   A     +M      P+V+
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           TF++LI    R     + I++L KM +    P++   + ++  L K++
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDK 401



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 9/190 (4%)

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           ++E  FK  ++M   G   D     + I GLCK G   +A  +   L       D+  YN
Sbjct: 125 ELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYN 184

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            LI G CK+G +  AL+L   +    + P+VVTY+ ++  LC+ G++ +A ++     + 
Sbjct: 185 VLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQR 241

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS--- 465
              P+VIT+ +LI    + +   + ++LL +M++    PD    +++++ + K       
Sbjct: 242 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEA 301

Query: 466 ---LNSLPSF 472
              LN +PS+
Sbjct: 302 IRFLNHMPSY 311



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 8/131 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      +L  +      PD +T+++L+ GL  E ++ EA A F  L   G +P+  T
Sbjct: 470 VGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAIT 529

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y +++ GLC+   T+ A++    M A G       C+P   +Y  +I+GL  EG   +A 
Sbjct: 530 YNSIMLGLCKARQTVRAIDFLAYMVARG-------CKPTETSYMILIEGLAYEGLAKEAL 582

Query: 120 ELLLQMKDKNI 130
           ELL ++  + +
Sbjct: 583 ELLNELCSRGV 593



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 3/112 (2%)

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+ +  L ++G LE   +    + C   +P+++  + +I GLC  G+  KA  +   +E+
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +  VP+VIT+++LI G+ +  E    ++LL +M   +V PD    + ++  L
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTL 222


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 142/408 (34%), Positives = 229/408 (56%), Gaps = 9/408 (2%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PDVFTY  L++GLC+ S T  A  +  EM +     GV   P+TVT+ +I+DGLCK G  
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVD----RGVT--PDTVTFNSIMDGLCKAGKF 61

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           ++A  LL  M ++N +P+  TY ++I G C  ++ + AK L  E +  G  P+VVT++++
Sbjct: 62  ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSIL 121

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
            D LCK G++DEA  L+  M  +G  P+  TYNTL+DG C   +   A EL  ++ S G 
Sbjct: 122 ADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGF 181

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +Y+I+++G CK   ++ AL +   ML +G  P V+ +  L  GL    +V+ A  
Sbjct: 182 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 241

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +F EM      AD   Y + ++G CK+    EA ++   +R       I  YN+L+DG C
Sbjct: 242 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYC 298

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K GRL+    +F  + C   VPN+ TY+I++ GLC  G++D+A      M     VP+V+
Sbjct: 299 KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVV 358

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +++++I G  + ++P +  ++L +M +  + PDA   + ++    K E
Sbjct: 359 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 406



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 142/445 (31%), Positives = 238/445 (53%), Gaps = 14/445 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TPD VTF S++ GLC   +   A +L   +    C P   TY TL++GLC+  +   A  
Sbjct: 42  TPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKT 101

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +E  +     G V  P+ VTY+ + DGLCK G +D+A EL+ +M      PN+VTY +
Sbjct: 102 LVDEFVSS----GFV--PDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNT 155

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C A    +A  L   ++  G  P+VVT+ +I+D LCK G++D+A ++++ M++ G
Sbjct: 156 LIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 215

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P   TY  L++G C TGRV+ A  +F  M S  C     +Y  L+NGYCK+   + A 
Sbjct: 216 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA- 274

Query: 260 SLYSEMLSKGIK--PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
               + +  GI+  P + ++N L  G  +  +++    +F++M   G   +  TY   +D
Sbjct: 275 ----QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMD 330

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLCK+G + EA     ++    C  D+ +YN +IDGL K+ + + A ++   +    + P
Sbjct: 331 GLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 390

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + VTY+ ++   C + + D A  +  +M +  V P+ +T++ LI G  + N      EL+
Sbjct: 391 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 450

Query: 438 HKM-KEINVMPDASIVSIVVDLLAK 461
           H+M +   V+   +  + ++D L K
Sbjct: 451 HEMLRNGCVVSACTTYNTIIDRLCK 475



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 163/527 (30%), Positives = 250/527 (47%), Gaps = 78/527 (14%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V     ++   + S F PD VT++ L  GLC   RI EA  L  ++   GC P++ TY T
Sbjct: 96  VDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNT 155

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++GLC+ S T  A  L E + +     G V  P+ VTYT I+DGLCKEG +DKA +++ 
Sbjct: 156 LIDGLCKASKTEKAYELLETLVSS----GFV--PDVVTYTIIVDGLCKEGRLDKALKMVE 209

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-------------------- 163
            M  +   P+V+TYT+++ G C     +EA  +F EM+ +                    
Sbjct: 210 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS 269

Query: 164 ----------GVQ--PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
                     G++  P +  +N +MD  CK G++DE   + + M   G  P+  TYN ++
Sbjct: 270 RTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 329

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING----------------------- 248
           DG C  G+V+ A     SM S GC   V SY+I+I+G                       
Sbjct: 330 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 389

Query: 249 ------------YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
                       +CK +  + A+ +   M+  G+ PD V +NTL  GL + +++  A++L
Sbjct: 390 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 449

Query: 297 FDEMQRNG-VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
             EM RNG V +   TY T ID LCK G + +A+ L   +     E +   YN  ID LC
Sbjct: 450 MHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 509

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNV 414
           K GRL+ A  L   +     + + V+Y+ +I GLC   Q+D+A  L  +M     +    
Sbjct: 510 KEGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITS 566

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            TF++LI  F +     + + LL  M +    P     ++V+  L K
Sbjct: 567 HTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCK 613



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 223/430 (51%), Gaps = 13/430 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+  LI GLC  S+  +A+ +  ++   G  PD  T+ ++++GLC+      A +L
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              MA  N      C P+  TY T+I GLCK+  VD+AK L+ +       P+VVTY+ +
Sbjct: 68  LAVMAERN------CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSIL 121

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
             G C     +EA  L  EM   G  PN+VT+N ++D LCK  K ++A  LL+ ++  G 
Sbjct: 122 ADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGF 181

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY  ++DG C  GR++ A ++   M   GC  +V +Y+ L+ G C+   ++ A  
Sbjct: 182 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 241

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW--TYRTFIDG 318
           ++ EM+SK    D + + +L  G  +  + + A K+ D     G+    +   Y   +DG
Sbjct: 242 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDG 296

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G + E   +F  +    C  +I+ YN ++DGLCK G+++ A     S+     VP+
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VV+Y+I+I GL    +  +AR +   M +  + P+ +T++ L+  F +       + +L 
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416

Query: 439 KMKEINVMPD 448
            M +  V PD
Sbjct: 417 NMIKAGVDPD 426



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 249/524 (47%), Gaps = 80/524 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+   F ++  +  +  TP+ VT+ +LI GLC  S+  +A  L   L   G  PDV TY
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +V+GLC+      AL + E M          C P+ +TYT +++GLC+ G VD+A  +
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRG------CTPSVITYTALMEGLCRTGRVDEAHHI 242

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL------------------------- 156
             +M  K+   + + Y S++ G+C +    EA+++                         
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGR 302

Query: 157 -------FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
                  F +M  +G  PN+ T+N++MD LCK+GK+DEA   L+ M   G  PD  +YN 
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           ++DG     +   A+++   M   G      +Y+ L+  +CK +  + A+ +   M+  G
Sbjct: 363 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 422

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG-VAADTWTYRTFIDGLCKNGYIVEA 328
           + PD V +NTL  GL + +++  A++L  EM RNG V +   TY T ID LCK G + +A
Sbjct: 423 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQA 482

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + L   +     E +   YN  ID LCK GRL+ A  L   +     + + V+Y+ +I G
Sbjct: 483 LLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIG 539

Query: 389 LCNDGQMDKAR-------------------DLFLD-----------------MEENAVVP 412
           LC   Q+D+A                    +L +D                 M +    P
Sbjct: 540 LCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSP 599

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +VIT++M+I    ++++  K  EL  +M    ++  AS VS  V
Sbjct: 600 SVITYNMVITCLCKLDKVDKAWELFDEMAVRGIV--ASSVSYTV 641



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 187/369 (50%), Gaps = 32/369 (8%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M ++ + P+V TY  +I G C A   ++A  +  EM+D+GV P+ VTFN IMD LCK GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
            + A  LL +M +   RP   TYNTL+ G C    V+ AK L     S G    V +YSI
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L +G CK   I+ A  L  EM   G  P++V +NTL  GL +  + E+A++L + +  +G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D  TY   +DGLCK G + +A+++   +    C   +  Y +L++GLC++GR++ A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 365 ELFR---------------SLPCGVL-----------------VPNVVTYSIMIGGLCND 392
            +F+               SL  G                    P +  Y+ ++ G C +
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G++D+  ++F DM     VPN+ T+++++ G  +  +  +    L  M     +PD    
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 453 SIVVDLLAK 461
           +I++D L K
Sbjct: 361 NIIIDGLFK 369



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 211/499 (42%), Gaps = 130/499 (26%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     ++  +LK   TP  +T+T+L++GLC   R+ EA  +F ++    C  D   Y
Sbjct: 199 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 258

Query: 62  TTLVNGLCRTSHTIVA------------LNLFEEMANGNGEFGVV--------------C 95
            +LVNG C++S T  A            ++++  + +G  + G +              C
Sbjct: 259 VSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGC 318

Query: 96  EPNTVTYTTIIDGLCKEGFVDKA-----------------------------------KE 120
            PN  TY  ++DGLCK G VD+A                                   ++
Sbjct: 319 VPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQ 378

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV------ 174
           +L QM    I P+ VTY +++  FC  + +++A  +   M+  GV P+ VT+N       
Sbjct: 379 VLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLS 438

Query: 175 ------------------------------IMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
                                         I+D LCK G + +A  L+D M  HGV  + 
Sbjct: 439 QTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANT 498

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMG------------CKH--------------- 237
            TYN  +D  C  GR++ A  L   M+++             CK                
Sbjct: 499 VTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVA 558

Query: 238 ------TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
                 T  ++++LI+ + K K ++ AL+L   M+ +G  P V+ +N +   L ++ +V+
Sbjct: 559 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVD 618

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           +A++LFDEM   G+ A + +Y   I GLC  G   EA+++   +    CE D      L 
Sbjct: 619 KAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLY 678

Query: 352 DGLCKSGRLEIALELFRSL 370
             L   GR E A EL R +
Sbjct: 679 LALRGQGRGEEAAELLRRM 697



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 47/89 (52%)

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + P+V TY+I+I GLC   + DKA ++  +M +  V P+ +TF+ ++ G  +  +  +  
Sbjct: 6   VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            LL  M E N  P     + ++  L K +
Sbjct: 66  SLLAVMAERNCRPSCCTYNTLISGLCKQQ 94


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 154/468 (32%), Positives = 249/468 (53%), Gaps = 6/468 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++    +  ++L S  TP  V +TSLI GLC  +   +A  LF  +   GC P   TY
Sbjct: 24  GKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTY 83

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++  C+      A +L ++M     E G V  P+ VTY T++DGLCK G V++A  L
Sbjct: 84  NVIIDASCKRGMLEEACDLIKKMI----EDGHV--PDVVTYNTVMDGLCKSGRVEEALLL 137

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+     PN  ++ ++I G C     ++A ++F EM  + + P+  ++ +++D L K
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAK 197

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK++EA +L   M+  G+ P A TYN ++ G CL   ++ A ELF SM S GC+ + F+
Sbjct: 198 AGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFT 257

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILI+ +CK  +++ A  L   M   G  PDVV ++TL  GL  I +V+ A  L ++M 
Sbjct: 258 FNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +        T  T I GLCK G I EA E+   +       D+  YN+L+ G C++G+ E
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 377

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL   +    L PNVVTY+ ++ GLC   ++ +A  +F  M+ +   PN+ T+  LI
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            GF    +    ++L  +M    + PD  +   +   L K+  S  +L
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/399 (35%), Positives = 217/399 (54%), Gaps = 6/399 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++ ++++    PD VT+ +++ GLC   R+ EA  LF ++   GC P+  ++ T++ GLC
Sbjct: 102 LIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLC 161

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           + S    A  +F EM   +        P++ +Y  +IDGL K G +++A +L  +M D  
Sbjct: 162 QQSKIDQACQVFHEMEARD------IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSG 215

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I P+ VTY  VI G C A   +EA  LF  M  +G +P+  TFN+++D  CK GKMDEA 
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAF 275

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           RLL  M   G  PD  TY+TL+ G C   RV+ A+ L   M    CK TV + + LI+G 
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK   I+ A  +   M+S G  PDVV +NTL  G     Q ERA +L  +M   G+A + 
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   + GLCK   + EA  +F  ++   C  ++  Y +LI G C +G+++  L+LF  
Sbjct: 396 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 455

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           + C  + P+ V Y  +   LC  G+  +A ++  +  E+
Sbjct: 456 MVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/429 (33%), Positives = 226/429 (52%), Gaps = 6/429 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD+ ++  LI GL    ++ +A  LF KL   G  P    YT+L++GLC  +    A  
Sbjct: 7   SPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF +M N  G     C P+ VTY  IID  CK G +++A +L+ +M +    P+VVTY +
Sbjct: 67  LFADM-NRRG-----CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V+ G C +    EA  LF EM   G  PN  + N I+  LC+  K+D+A ++   M    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD+++Y  L+DG    G++N A +LF  M   G   +  +Y+++I+G C    ++ AL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  M SKG +P     N L     +  +++ AF+L   M  +G   D  TY T I GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C    + +A  L   +   +C+  +   N+LI GLCK+GR++ A E+  ++      P+V
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTY+ ++ G C  GQ ++AR+L  DM    + PNV+T+  L+ G  + N   +   +  +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 440 MKEINVMPD 448
           MK     P+
Sbjct: 421 MKSSGCAPN 429



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 134/414 (32%), Positives = 211/414 (50%), Gaps = 23/414 (5%)

Query: 3   RVSHGFVVLG-----RILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFT 47
           R SH  ++LG     +I ++C            PD+ ++  LI GL    ++ EA  LF 
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFR 209

Query: 48  KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIID 107
           ++   G  P   TY  +++G+C       AL LF+ M +        C P+  T+  +ID
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG------CRPSRFTFNILID 263

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
             CK G +D+A  LL +M D    P+VVTY+++I G C     ++A+ L  +M+ +  +P
Sbjct: 264 AHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
            VVT N ++  LCK G++ EA  +LD M+  G  PD  TYNTL+ G C  G+   A+EL 
Sbjct: 324 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 383

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M + G    V +Y+ L++G CK   +  A  ++++M S G  P++  +  L +G    
Sbjct: 384 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR-ILKCE-FDIR 345
            QV+   KLF EM   G++ D   Y T    LCK+G    A+E+    R  L+ E +   
Sbjct: 444 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDE 503

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            Y   +DGL  +G++E+AL   R +  G  +P     + ++ GLC  GQ  +AR
Sbjct: 504 VYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEAR 557



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 171/325 (52%), Gaps = 4/325 (1%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M ++N+ P+  +Y  +I G   A   N+A+ LF +++  GV P+ V +  ++  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
            D+A  L   M + G  P   TYN ++D  C  G +  A +L   M   G    V +Y+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +++G CK+  +E AL L++EM   G  P+   HNT+ +GL +  ++++A ++F EM+   
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA--YNSLIDGLCKSGRLEI 362
           +  D+W+Y   IDGL K G + EA +LF   R+L       A  YN +I G+C +  L+ 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFR--RMLDSGITPSAVTYNVVIHGMCLAYTLDE 238

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           ALELF+S+      P+  T++I+I   C  G+MD+A  L   M ++  VP+V+T+  LI 
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLIS 298

Query: 423 GFIRINEPSKVIELLHKMKEINVMP 447
           G   I        LL  M +    P
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKP 323



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 163/300 (54%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M ++ V P+  ++ +++D L K GK+++A  L   ++  GV P    Y +L+ G C+   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
            + A+ELF  M   GC  +  +Y+++I+  CK   +E A  L  +M+  G  PDVV +NT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  GL +  +VE A  LF+EM+R G   +  ++ T I GLC+   I +A ++FH +    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D  +Y  LIDGL K+G+L  A +LFR +    + P+ VTY+++I G+C    +D+A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +LF  M      P+  TF++LI    +  +  +   LL +M +   +PD    S ++  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 143/268 (53%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M +  V PD+++Y  L+DG    G++N A++LF  +   G   +  +Y+ LI+G C    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            + A  L+++M  +G  P  V +N +     +   +E A  L  +M  +G   D  TY T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +DGLCK+G + EA+ LF+ +  L C  + R++N++I GLC+  +++ A ++F  +    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + P+  +Y I+I GL   G++++A  LF  M ++ + P+ +T++++I G        + +
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
           EL   M+     P     +I++D   K 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKR 268



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 16/272 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV     +L  ++K    P  VT  +LI GLC   RI EA  +   +   G  PDV T
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y TLV+G CR   T  A  L  +M A G         PN VTYT ++ GLCK   + +A 
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARG-------LAPNVVTYTALVSGLCKANRLPEAC 415

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  QMK     PN+ TYT++I GFC A   +   +LF EM+  G+ P+ V +  +  EL
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475

Query: 180 CKNGKMDEASRLLDLMIQ--HGVRPDAF---TYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           CK+G+   ++R L+++ +    +R +A+    Y   +DG    G++  A      M   G
Sbjct: 476 CKSGR---SARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGG 532

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                   + L+ G CK+ +   A ++  E++
Sbjct: 533 QLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 49/201 (24%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +L  ++     P+ VT+T+L+ GLC  +R+ EA  +F +++  GC P++FTY
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 433

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC---EPNTVTYTTIIDGLCKEGFVDKA 118
           T L+ G C        L LF EM         VC    P+ V Y T+   LCK G   +A
Sbjct: 434 TALILGFCSAGQVDGGLKLFGEM---------VCAGISPDHVVYGTLAAELCKSGRSARA 484

Query: 119 KELLLQMKDK-------------------------------------NIKPNVVTYTSVI 141
            E+L + ++                                         P      S++
Sbjct: 485 LEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLV 544

Query: 142 RGFCYAKDWNEAKRLFIEMMD 162
            G C +    EA+ +  E+MD
Sbjct: 545 AGLCKSGQGGEARAVLEEIMD 565


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 163/489 (33%), Positives = 253/489 (51%), Gaps = 31/489 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   + +    PD V   +L+  LC   +I EA  +F  + + G  PDVF+Y
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC-------------------------- 95
           T ++NG       +   +LF+ M  G+G   V+C                          
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 423

Query: 96  ----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +P+ VTY T+I  LC+ G +D A E   QM D+ + P+   Y  +I+GFC      
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +AK L  E+M+ G++ ++V F  I++ LCK G++ +A  + DL +  G+ PDA  YN L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+CL G++  A  +F +M S G +  V  Y  L+NGYCK   I+  LSL+ EML KGIK
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P  +++N +  GLFE  +   A   F EM  +G+A +  TY   + GL KN    EA+ L
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  LR +  + DI   N++I G+ ++ R+E A +LF S+    LVP  VTYSIMI  L  
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIK 723

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G +++A D+F  M+     P+    + ++R  ++ NE  +    L K+ E N   +   
Sbjct: 724 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 783

Query: 452 VSIVVDLLA 460
             ++VDL +
Sbjct: 784 AMLLVDLFS 792



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 249/534 (46%), Gaps = 79/534 (14%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R        G++L++    DA+  + L+KG C   R  EA   L  +    GC PDVF+Y
Sbjct: 128 RPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 187

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+  LC    +  A +L   MA G    G VC P+ V Y T+IDG  KEG V+KA +L
Sbjct: 188 NILLKSLCNQGKSGQADDLLRMMAEG----GTVCSPDVVAYNTVIDGFFKEGDVNKACDL 243

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK--------------------------------- 148
             +M  + I P++VTY+SV+   C A+                                 
Sbjct: 244 FKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303

Query: 149 --DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W EA R+F EM  Q + P+VV  N +M  LCK GK+ EA  + D M   G  PD F+
Sbjct: 304 TGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 363

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  +L+G+   G +    +LF  M   G    + ++++LI  Y     ++ A+ +++EM 
Sbjct: 364 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 423

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G+KP VV + T+   L  I +++ A + F++M   GV  D + Y   I G C +G ++
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 327 EAVELFHTL-----------------------RILKCE--FDIRA----------YNSLI 351
           +A EL   +                       R++  +  FD+            YN L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG C  G++E AL +F ++    + PNVV Y  ++ G C  G++D+   LF +M +  + 
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 412 PNVITFDMLIRGFIRINE--PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           P+ I ++++I G        P+KV    H+M E  +  +    SIV+  L KN 
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKV--KFHEMTESGIAMNKCTYSIVLRGLFKNR 655



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 193/380 (50%), Gaps = 4/380 (1%)

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
           S   +A+ LF   A+   +   V  P + TY  ++D   +    + A     Q+    ++
Sbjct: 87  SGPALAVALFNRAAS-RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLR 145

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASR 190
            + +  + +++GFC AK  +EA  + +    + G  P+V ++N+++  LC  GK  +A  
Sbjct: 146 VDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADD 205

Query: 191 LLDLMIQHGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           LL +M + G    PD   YNT++DGF   G VN A +LF  M   G    + +YS +++ 
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK + ++ A +   +M++KG+ PD   +N L  G     Q + A ++F EM+R  +  D
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
                T +  LCK G I EA ++F T+ +     D+ +Y  +++G    G L    +LF 
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    + P + T++++I    N G +DKA  +F +M ++ V P+V+T+  +I    RI 
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 429 EPSKVIELLHKMKEINVMPD 448
           +    +E  ++M +  V+PD
Sbjct: 446 KMDDAMEKFNQMIDQGVVPD 465



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 164/338 (48%), Gaps = 9/338 (2%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P   TY  ++     A     A   F +++  G++ + +  + ++   C+  + DEA 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA- 167

Query: 190 RLLDLMIQH----GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYS 243
             LD+++      G  PD F+YN LL   C  G+   A +L   M   G  C   V +Y+
Sbjct: 168 --LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +I+G+ K  ++  A  L+ EM+ +GI PD+V ++++   L +   +++A     +M   
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           GV  D WTY   I G    G   EAV +F  +R      D+ A N+L+  LCK G+++ A
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++F ++      P+V +Y+IM+ G    G +    DLF  M  + + P + TF++LI+ 
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 405

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +       K + + ++M++  V P       V+  L +
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 153/336 (45%), Gaps = 11/336 (3%)

Query: 2   GRVSHGFVV-----LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG ++     +  I+ +    D V F S+I  LC   R+M+A  +F      G  P
Sbjct: 475 GFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP 534

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D   Y  L++G C       AL +F+ M +         EPN V Y T+++G CK G +D
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG------IEPNVVGYGTLVNGYCKIGRID 588

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +   L  +M  K IKP+ + Y  +I G   A     AK  F EM + G+  N  T+++++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L KN   DEA  L   +    V+ D  T NT++ G   T RV  AK+LF S+   G  
Sbjct: 649 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 708

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +YSI+I    K   +E A  ++S M + G +PD  + N +   L + +++ RA   
Sbjct: 709 PCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 768

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
             ++     + +  T    +D     G   E +   
Sbjct: 769 LSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 155/328 (47%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++        +++     PD   +  LI+G C    +++A  L +++   G   D+  
Sbjct: 444 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 503

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +++N LC+    + A N+F+   N      V   P+ V Y  ++DG C  G ++KA  
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    I+PNVV Y +++ G+C     +E   LF EM+ +G++P+ + +N+I+D L 
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+   A      M + G+  +  TY+ +L G       + A  LF  + +M  K  + 
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + + +I G  + + +E A  L++ +   G+ P  V ++ +   L +   VE A  +F  M
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSM 737

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           Q  G   D+      +  L K   IV A
Sbjct: 738 QNAGCEPDSRLLNHVVRELLKKNEIVRA 765


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 158/470 (33%), Positives = 251/470 (53%), Gaps = 43/470 (9%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++KGLC    + EA  L  ++      PD+ +Y TL+NGLC+      A+ L  EM    
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                 C PN+VT TT++DGLCK+G +D+A ELL  MK K    +VV Y ++I GFC   
Sbjct: 64  ------CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 117

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
           + +  K LF EM+ +G+  NVVT++ ++  LC+ G+  EA+ +L+ M +HG+ PD  TY 
Sbjct: 118 NLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYT 177

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+DG C  GR  HA +L   M   G + +  +Y++L++G CK   +  A  +   M+ K
Sbjct: 178 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM--QRNGVAADTWTYRTFIDGLCKNGYIV 326
           G K DVV +NTL  GL +  +V+ A KLF+ M    N +  + +T+   I GLCK G + 
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +AV++   +       ++  YN L+ G  K+G+++ A+EL++ +     VPN  TYSI+I
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 357

Query: 387 GG-----------------------------------LCNDGQMDKARDLFLDMEENAVV 411
            G                                   LC +G +++A+ LF +M      
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           P++I+F+ +I G ++  +   V EL  KM E+ + PDA   S +++ L+K
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK 467



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 249/476 (52%), Gaps = 11/476 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  + K  F  D V + +LI G C    +     LF ++   G   +V TY
Sbjct: 82  GRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTY 141

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + LV+GLCR      A  +   MA    E G+   P+ VTYT +IDGLCK+G    A +L
Sbjct: 142 SCLVHGLCRLGQWKEANTVLNAMA----EHGI--HPDVVTYTGLIDGLCKDGRATHAMDL 195

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +K  +P+ VTY  ++ G C      +A ++   M+++G + +VVT+N +M  LC 
Sbjct: 196 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255

Query: 182 NGKMDEASRLLDLMI--QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            GK+DEA +L + M   ++ + P+ FT+N L+ G C  GR+  A ++   M   G    +
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 315

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y++L+ G  K  +I+ A+ L+ ++L  G  P+   ++ L  G  ++  +  A  LF E
Sbjct: 316 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 375

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+ +G+    + Y T +  LCK G + +A  LF  +    CE DI ++N++IDG  K+G 
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            +   EL   +    L P+ +T+S +I  L   G++D+A+     M  +   P+ + +D 
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN--EIS-LNSLPSF 472
           L++G     + +++I LLH+M     + D  IVS ++  L  +  E+  +  LP+F
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTF 551



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 189/396 (47%), Gaps = 8/396 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      VL  + +    PD VT+T LI GLC + R   A  L   +   G EP   T
Sbjct: 151 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 210

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++GLC+    I A  +   M           + + VTY T++ GLC +G VD+A +
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGK------KADVVTYNTLMKGLCDKGKVDEALK 264

Query: 121 LLLQMKDKN--IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           L   M D    ++PNV T+  +I G C      +A ++  +M+ +G   N+VT+N+++  
Sbjct: 265 LFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 324

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
             K GK+ EA  L   ++  G  P++FTY+ L+DGFC    +N AK LF  M + G    
Sbjct: 325 CLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPA 384

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           +F Y+ L+   CK   +E A SL+ EM +   +PD++  NT+  G  +    +   +L  
Sbjct: 385 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 444

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M   G+  D  T+ T I+ L K G + EA      +       D   Y+SL+ GL   G
Sbjct: 445 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKG 504

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                + L   +     V +    S ++  LC+  Q
Sbjct: 505 DTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQ 540



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 151/306 (49%), Gaps = 37/306 (12%)

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
            N+++  LC+NG + EA  L+  M +  V PD  +YNTL++G C   ++  A  L + ME
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           + GC     + + L++G CK+  ++ A+ L   M  KG   DVV++ TL  G      ++
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           R  +LFDEM   G++A+  TY   + GLC+ G   EA  + + +       D+  Y  LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 352 DGLCKSGRLEIALELFRSL------PCGVLV----------------------------- 376
           DGLCK GR   A++L   +      P  V                               
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDM--EENAVVPNVITFDMLIRGFIRINEPSKVI 434
            +VVTY+ ++ GLC+ G++D+A  LF  M   EN + PNV TF+MLI G  +    +K +
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300

Query: 435 ELLHKM 440
           ++  KM
Sbjct: 301 KIHRKM 306



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 123/226 (54%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +I++ G C+N  +  A+ L  EM  K + PD+V +NTL  GL +  +++ A  L  EM+ 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G   ++ T  T +DGLCK+G + EA+EL   ++    + D+  Y +LI G C +G L+ 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             ELF  +    +  NVVTYS ++ GLC  GQ  +A  +   M E+ + P+V+T+  LI 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           G  +    +  ++LL+ M E    P     ++++  L K  + +++
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDA 227



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 29/239 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +  ++L   F P++ T++ LI G C    +  A  LF ++R  G  P +F Y
Sbjct: 329 GKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 388

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGN------------------GEFGVVCE------- 96
            TL+  LC+      A +LF+EM N N                  G+F  V E       
Sbjct: 389 NTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 448

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P+ +T++T+I+ L K G +D+AK  L +M      P+ + Y S+++G     D  E
Sbjct: 449 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTE 508

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
              L  +M  +G   +    + I+  LC + +  +   LL    Q      + + N LL
Sbjct: 509 IINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 567



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 41/90 (45%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +      L R++ S FTPDA+ + SL+KGL ++    E   L  ++   G   D   
Sbjct: 468 LGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKI 527

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGE 90
            +T++  LC +   +  + L      G  E
Sbjct: 528 VSTILTCLCHSIQEVDVMELLPTFFQGTSE 557


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 157/465 (33%), Positives = 251/465 (53%), Gaps = 31/465 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ SL+  LC   R  EA  +F  +   G EPD+ TY TL+ G   T   +V ++ 
Sbjct: 299 PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA-TKGALVEMHA 357

Query: 81  FEEMANGNG------EFGV-VC-----------------------EPNTVTYTTIIDGLC 110
             ++   NG       F + +C                        PN VTY  +I  LC
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G VD A     QM D+ + PN++ YTS+I   C    W++A+ L +EM+D+G+  N +
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN I+   CK G++ E+ +L DLM++ GV+P+  TY+TL+DG+CL G+++ A +L  SM
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G K    +Y+ LINGYC+   ++ AL+L+ EM+S G+ P+++ +N +  GLF   + 
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L+  + ++G   +  TY   + GLCKN    EA+ +F  L +   + + R +N +
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I  L K GR + A +LF +L    LVP+V TYS+M   L   G +++  DLFL MEEN  
Sbjct: 658 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 717

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
             N    + ++R  ++  + ++    L  + E +   +AS  S++
Sbjct: 718 TANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 268/542 (49%), Gaps = 74/542 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  +A+TFT L+KGLCA+ R  +A  +   ++    C PDVF+
Sbjct: 101 GRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFS 160

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T L+ GLC  + +  AL L   MA+  G       P+ V+YTT+I+G  KEG  DKA  
Sbjct: 161 CTILLKGLCDENRSQEALELLHMMADDRGGGSA---PDVVSYTTVINGFFKEGDSDKAYS 217

Query: 121 LLLQMKDKNIKPNVVTYTSVI-----------------------------------RGFC 145
              +M D+ I P+VVTY+S+I                                    G+C
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR--------------- 190
            ++   EA     +M   GV+P+VVT+N +MD LCKNG+  EA +               
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337

Query: 191 --------------------LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
                               LLDLM+++G+ PD   +N L+  +    +V+ A  +F  M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G    V +Y  +I   CK+  ++ A+  + +M+ +G+ P+++++ +L   L    + 
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           ++A +L  EM   G+  +T  + + I   CK G ++E+ +LF  +  +  + ++  Y++L
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           IDG C +G+++ A +L  S+    + P+ VTY+ +I G C   +MD A  LF +M  + V
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            PN+IT++++++G       +   EL   + +     + S  +I++  L KN ++  +L 
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 471 SF 472
            F
Sbjct: 638 MF 639



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 246/492 (50%), Gaps = 42/492 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL  ++K+   P+ +T+ S++ G C+  +  EA     K+R  G EPDV TY +L++ LC
Sbjct: 253 VLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLC 312

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF--------------- 114
           +   +  A  +F+ M           EP+  TY T++ G   +G                
Sbjct: 313 KNGRSTEARKIFDSMTKRG------LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 115 --------------------VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
                               VD+A  +  +M+   + PNVVTY +VI   C +   ++A 
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
             F +M+D+G+ PN++ +  ++  LC   K D+A  L+  M+  G+  +   +N+++   
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  GRV  +++LF  M  +G K  V +YS LI+GYC   +++ A  L S M S G+KPD 
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +NTL  G   + +++ A  LF EM  +GV+ +  TY   + GL        A EL+  
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVG 606

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     + ++  YN ++ GLCK+   + AL +F++L    L     T++IMIG L   G+
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV-S 453
            D+A+DLF  +  N +VP+V T+ ++    I      ++ +L   M+E     ++ ++ S
Sbjct: 667 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 726

Query: 454 IVVDLLAKNEIS 465
           IV  LL + +I+
Sbjct: 727 IVRKLLQRGDIT 738



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 234/460 (50%), Gaps = 6/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     +     +L    +PD VT++S+I  LC    + +A  + T +   G  P+  TY
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C +     A+   ++M +     GV  EP+ VTY +++D LCK G   +A+++
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSD----GV--EPDVVTYNSLMDYLCKNGRSTEARKI 323

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  + ++P++ TY ++++G+       E   L   M+  G+ P+   FN+++    K
Sbjct: 324 FDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAK 383

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+DEA  +   M QHG+ P+  TY  ++   C +G V+ A   F  M   G    +  
Sbjct: 384 QEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIV 443

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+  C   + + A  L  EML +GI  + +  N++     +  +V  + KLFD M 
Sbjct: 444 YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV 503

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R GV  +  TY T IDG C  G + EA +L  ++  +  + D   YN+LI+G C+  R++
Sbjct: 504 RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMD 563

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL LF+ +    + PN++TY+I++ GL +  +   A++L++ + ++     + T+++++
Sbjct: 564 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G  + N   + + +   +   ++  +    +I++  L K
Sbjct: 624 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 217/445 (48%), Gaps = 16/445 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP   T+  LI   C   R+    A    +   G   +  T+T L+ GLC    T  A++
Sbjct: 84  TPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMD 143

Query: 80  L-FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---NIKPNVV 135
           +    M        + C P+  + T ++ GLC E    +A ELL  M D       P+VV
Sbjct: 144 IVLRRMTE------LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVV 197

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +YT+VI GF    D ++A   + EM+D+ + P+VVT++ I+  LCK   MD+A  +L  M
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTM 257

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +++GV P+  TYN++L G+C + +   A      M S G +  V +Y+ L++  CKN   
Sbjct: 258 VKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRS 317

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  ++  M  +G++PD+  + TL  G      +     L D M RNG+  D   +   
Sbjct: 318 TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL 377

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I    K   + EA+ +F  +R      ++  Y ++I  LCKSG ++ A+  F  +    L
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSK 432
            PN++ Y+ +I  LC   + DKA +L L+M +  +  N I F+ +I       R+ E  K
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 433 VIELLHKMKEINVMPDASIVSIVVD 457
           + +L   M  I V P+    S ++D
Sbjct: 498 LFDL---MVRIGVKPNVITYSTLID 519



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/369 (21%), Positives = 159/369 (43%), Gaps = 43/369 (11%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG---VRPDAFTYN 208
           +A+ +F E++ +G   ++   N  + ++ ++      SR  + M + G   V P   TY 
Sbjct: 33  DARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYG 91

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+   C  GR++       ++   G +    +++ L+ G C +K    A+ +    +++
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 269 ---------------------------------------GIKPDVVIHNTLFVGLFEIHQ 289
                                                  G  PDVV + T+  G F+   
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            ++A+  + EM    ++ D  TY + I  LCK   + +A+E+  T+       +   YNS
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++ G C S + + A+   + +    + P+VVTY+ ++  LC +G+  +AR +F  M +  
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + P++ T+  L++G+       ++  LL  M    + PD  + +I++   AK E    ++
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 470 PSFTVHEQQ 478
             F+   Q 
Sbjct: 392 LVFSKMRQH 400



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     +   ++ S  +P+ +T+  +++GL    R   A  L+  +   G + ++ TY 
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++GLC+ + T  AL +F+ +   + +        T T+  +I  L K G  D+AK+L 
Sbjct: 621 IILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKVGRNDEAKDLF 674

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             +    + P+V TY+ +           E   LF+ M + G   N    N I+ +L + 
Sbjct: 675 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 734

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           G +  A   L ++ +     +A T + L
Sbjct: 735 GDITRAGTYLSMIDEKHFSLEASTASLL 762


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 148/393 (37%), Positives = 224/393 (56%), Gaps = 6/393 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G  S  F V   ILK  + PDA+T T+LIKGLC +  I +A     K+   G + +  +
Sbjct: 117 LGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVS 176

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  AL +   +       G +   + V Y TIIDG+CK+  V+ A +
Sbjct: 177 YRTLINGLCKVGQTKAALEMLRRID------GKLVRLDVVMYNTIIDGVCKDKLVNDAFD 230

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M  K I P VVTY ++I G C      +A  L  +M+ + + P V TF++++D  C
Sbjct: 231 FYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFC 290

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +  +M++  V+P+  TYN+L++G+CL   VN A+ +F +M  +G    V 
Sbjct: 291 KEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVH 350

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYSI+I+G+CK K ++ A+ L+ EM  K I PDVV +N+L  GL +  ++  A KL  EM
Sbjct: 351 SYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEM 410

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   +  TY + +D LCKN ++ +A+EL   L+    +  +  YN LI+GLCKSGRL
Sbjct: 411 HDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRL 470

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
           + A ++F  +       +V TY+ MI G C  G
Sbjct: 471 KDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 138/405 (34%), Positives = 223/405 (55%), Gaps = 6/405 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + VT + LI           + ++F+ +   G EPD  T TTL+ GLC       AL+  
Sbjct: 103 NLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFH 162

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +++        +  + N V+Y T+I+GLCK G    A E+L ++  K ++ +VV Y ++I
Sbjct: 163 DKV------LALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTII 216

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C  K  N+A   + EM+ + + P VVT+N ++  LC  G++ +A  LL  MI   + 
Sbjct: 217 DGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENIN 276

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P  +T++ L+D FC  G+V  AK +FV M     K  + +Y+ L+NGYC   E+  A S+
Sbjct: 277 PTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESI 336

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           ++ M   G+ PDV  ++ +  G  +I  V+ A KLF+EM    +  D  TY + IDGLCK
Sbjct: 337 FNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCK 396

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           +G I  A++L   +       +I  YNSL+D LCK+  ++ A+EL   L    + P+V T
Sbjct: 397 SGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCT 456

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           Y+I+I GLC  G++  A+ +F D+  N    +V T++ +I+GF +
Sbjct: 457 YNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 222/419 (52%), Gaps = 9/419 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP  + F  ++  L   +      +L  ++   G   ++ T + L+N   +  H  ++ +
Sbjct: 66  TPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFS 125

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +F  +     E      P+ +T TT+I GLC +G + KA     ++     + N V+Y +
Sbjct: 126 VFSNILKKGYE------PDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C       A  +   +  + V+ +VV +N I+D +CK+  +++A      M+   
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P   TYNTL+ G C+ G++  A  L   M       TV+++SIL++ +CK  +++ A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +++  M+ K +KP++V +N+L  G   +++V +A  +F+ M + GVA D  +Y   I G 
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   + EA++LF  +   +   D+  YNSLIDGLCKSGR+  AL+L   +      PN+
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI 419

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIE 435
           +TY+ ++  LC +  +DKA +L   ++++ + P+V T+++LI G     R+ +  KV E
Sbjct: 420 ITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFE 478



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 179/326 (54%), Gaps = 6/326 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      +L RI       D V + ++I G+C +  + +A   ++++      P V T
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+ GLC       A+ L  +M   N        P   T++ ++D  CKEG V +AK 
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILEN------INPTVYTFSILVDAFCKEGKVKEAKN 300

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           + + M  K++KPN+VTY S++ G+C   + N+A+ +F  M   GV P+V ++++++   C
Sbjct: 301 VFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFC 360

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   +DEA +L + M    + PD  TYN+L+DG C +GR+++A +L   M   G    + 
Sbjct: 361 KIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNII 420

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L++  CKN  ++ A+ L +++    I+P V  +N L  GL +  +++ A K+F+++
Sbjct: 421 TYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDV 480

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIV 326
             NG   D +TY T I G CK G+++
Sbjct: 481 LVNGYNIDVYTYNTMIKGFCKKGFVI 506



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 171/338 (50%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           +  KN  P+++ +  ++     A  ++    L  +M   G+  N+VT +++++   + G 
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
              +  +   +++ G  PDA T  TL+ G CL G ++ A      + ++G +    SY  
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LING CK  + + AL +   +  K ++ DVV++NT+  G+ +   V  AF  + EM    
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +     TY T I GLC  G + +A+ L H + +      +  ++ L+D  CK G+++ A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            +F  +    + PN+VTY+ ++ G C   +++KA  +F  M +  V P+V ++ ++I GF
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +I    + ++L  +M    + PD    + ++D L K+
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKS 397



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 136/303 (44%), Gaps = 35/303 (11%)

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
           L+ Q    P    +  +L         +    L   ME  G    + + SILIN + +  
Sbjct: 59  LLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLG 118

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
               + S++S +L KG +PD +   TL  GL     + +A    D++   G   +  +YR
Sbjct: 119 HNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYR 178

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL------- 366
           T I+GLCK G    A+E+   +       D+  YN++IDG+CK   +  A +        
Sbjct: 179 TLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK 238

Query: 367 --------FRSLPCGVLV--------------------PNVVTYSIMIGGLCNDGQMDKA 398
                   + +L CG+ +                    P V T+SI++   C +G++ +A
Sbjct: 239 RICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEA 298

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           +++F+ M +  V PN++T++ L+ G+  +NE +K   + + M +I V PD    SI++  
Sbjct: 299 KNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISG 358

Query: 459 LAK 461
             K
Sbjct: 359 FCK 361



 Score = 38.9 bits (89), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 41/229 (17%), Positives = 88/229 (38%), Gaps = 36/229 (15%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           H   SYS   N      ++   +S ++ +L  K   P ++    +   L + +       
Sbjct: 31  HCFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVS 90

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M+ NG+A++  T    I+   + G+   +  +F    ILK  ++            
Sbjct: 91  LHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFS--NILKKGYE------------ 136

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
                                P+ +T + +I GLC  G + KA      +       N +
Sbjct: 137 ---------------------PDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV 175

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           ++  LI G  ++ +    +E+L ++    V  D  + + ++D + K+++
Sbjct: 176 SYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKL 224


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 169/538 (31%), Positives = 267/538 (49%), Gaps = 68/538 (12%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTY 61
           RV     +L  +     TP+ VTF S+I GLC   R  EA  +F  + +  G  PD  TY
Sbjct: 445 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITY 504

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA-----------NGNGEFGVVCE-------------- 96
            TL++GL RT     A  L + M            NG  + G V                
Sbjct: 505 CTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELV 564

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ VT+  +I G CK G  ++A  L  +M  KN++P+V+T+ ++I G C A     A+ +
Sbjct: 565 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 624

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M + GV PNVVT+N ++  LCK+G+++EA + L+ M+  G  PD+ TY +L+   C 
Sbjct: 625 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 684

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             R + A +L   ++S G      +Y+IL++G  K+ + E A+++  EM+ KG  PDVV 
Sbjct: 685 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT 744

Query: 277 HNTLF--------------------------------------VGLFEIHQVERAFKLFD 298
           +NTL                                        GL ++ +++ A +L  
Sbjct: 745 YNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQ 804

Query: 299 EMQRNG--VAADTWTYRTFIDGLCKNGYIVEAVELFHTLR--ILKCEFDIRAYNSLIDGL 354
           EM R    V  +  TY +F+DGLCK   + EA EL  +LR   L+   D   +++LIDGL
Sbjct: 805 EMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 864

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK G+ + A  +F  +  G  VPNVVTY++++ GLC   +M++A  +   M +  V P+V
Sbjct: 865 CKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDV 924

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           IT+ +L+  F + +   + +ELLH M      P+    + ++D L K++ S  +   F
Sbjct: 925 ITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMF 982



 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 147/434 (33%), Positives = 236/434 (54%), Gaps = 15/434 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ +LI  LC    + EA  L   +    C P+V TY+ L+NGLC+      A  L
Sbjct: 249 PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEAREL 308

Query: 81  FEEMANGNGEFGVVCE--PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK--PNVVT 136
            +EM   +      C+  PN +TY + +DGLCK+    +A EL+  ++D +++  P+ VT
Sbjct: 309 IQEMTRKS------CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           ++++I G C     +EA  +F +M+  G  PNV+T+N +++ LCK  KM+ A  +++ M+
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             GV PD  TY+ L+D FC   RV+ A EL   M S GC   V +++ +I+G CK+    
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482

Query: 257 GALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
            A  ++ +M L  G+ PD + + TL  GLF   +  +A  L D M       DT+ +   
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCC 538

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I+GL K G +  A+++++ +  L+   D   +N LI G CK+G  E A  LF  +    L
Sbjct: 539 INGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 598

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+V+T+  +I GLC  GQ++ ARD+   M    V PNV+T++ L+ G  +     +  +
Sbjct: 599 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 658

Query: 436 LLHKMKEINVMPDA 449
            L +M     +PD+
Sbjct: 659 FLEEMVSSGCVPDS 672



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/465 (34%), Positives = 241/465 (51%), Gaps = 44/465 (9%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GR+      L  ++ S   PD++T+ SL+  LC  SR  +A  L ++L+ FG +PD  TY
Sbjct: 651  GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTY 710

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV--------------------------- 94
              LV+GL ++  T  A+ + EEM        VV                           
Sbjct: 711  NILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS 770

Query: 95   -----CEPNTVTYTTIIDGLCKEGFVDKAKELLLQM--KDKNIKPNVVTYTSVIRGFCYA 147
                 C PN VTY+ +I+GLCK G +D+A+EL+ +M  K  ++ PN++TY S + G C  
Sbjct: 771  RVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQ 830

Query: 148  KDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                EA  L   + D    V P+ VTF+ ++D LCK G+ DEA  + D MI  G  P+  
Sbjct: 831  SMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVV 890

Query: 206  TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            TYN L++G C T ++  A  +  SM   G    V +YS+L++ +CK   ++ AL L   M
Sbjct: 891  TYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGM 950

Query: 266  LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ-RNGVAADTWTYRTFIDGLCKNGY 324
             S+G  P+VV  N++  GL +  Q   AF++FD+M  ++G+A D  TY T IDGL + G+
Sbjct: 951  ASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGW 1010

Query: 325  IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
              +A  L   +     + D  A+N  I+GL K G +  AL     L    LVP+ VT++I
Sbjct: 1011 AGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNI 1063

Query: 385  MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
            +I G C  G  ++A  LF +M    + P+V+TF  LI G  +  +
Sbjct: 1064 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108



 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 255/485 (52%), Gaps = 22/485 (4%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +G VS    V  R+L+    PD VTF  LI G C      +A+ALF ++     +PDV T
Sbjct: 545  LGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 604

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            +  L++GLC+      A ++ + M N     GV   PN VTY  ++ GLCK G +++A +
Sbjct: 605  FGALIDGLCKAGQVEAARDILDLMGN----LGV--PPNVVTYNALVHGLCKSGRIEEACQ 658

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
             L +M      P+ +TY S++   C A   ++A +L  E+   G  P+ VT+N+++D L 
Sbjct: 659  FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 718

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM---GCKH 237
            K+G+ ++A  +L+ M+  G  PD  TYNTL+D  C  G +  A+ L   M S     C  
Sbjct: 719  KSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVP 778

Query: 238  TVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIHNTLFVGLFEIHQVERAFK 295
             V +YS+LING CK   I+ A  L  EM+ K   + P+++ +N+   GL +   +  A +
Sbjct: 779  NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACE 838

Query: 296  LFDEMQRNG---VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
            L   + R+G   V+ DT T+ T IDGLCK G   EA  +F  +       ++  YN L++
Sbjct: 839  LMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMN 897

Query: 353  GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            GLCK+ ++E A  +  S+    + P+V+TYS+++   C    +D+A +L   M      P
Sbjct: 898  GLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTP 957

Query: 413  NVITFDMLIRGFIRINEPSKVIELLHKMK-EINVMPDASIVSIVVDLL------AKNEIS 465
            NV+TF+ +I G  + ++  +  ++   M  +  + PD      ++D L       + E+ 
Sbjct: 958  NVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVL 1017

Query: 466  LNSLP 470
            L+++P
Sbjct: 1018 LDAMP 1022



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/456 (33%), Positives = 245/456 (53%), Gaps = 15/456 (3%)

Query: 12  GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
           G + +    P  VT+ ++I GLC  + +     LF +L   G  PDV TY TL++ LC+ 
Sbjct: 205 GEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKA 264

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--N 129
                A  L  +M++ +      C PN VTY+ +I+GLCK G +D+A+EL+ +M  K  +
Sbjct: 265 GDLEEARRLHGDMSSRS------CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 318

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDELCKNGKMDE 187
           + PN++TY S + G C      EA  L   + D    V P+ VTF+ ++D LCK G++DE
Sbjct: 319 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDE 378

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  + D MI  G  P+  TYN L++G C   ++  A  +  SM   G    V +YS+L++
Sbjct: 379 ACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 438

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ-RNGVA 306
            +CK   ++ AL L   M S+G  P+VV  N++  GL +  +   AF++FD+M  ++G+ 
Sbjct: 439 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLV 498

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D  TY T IDGL + G   +A  L   +     + D  A+N  I+GL K G +  AL++
Sbjct: 499 PDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQV 554

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           +  +    LVP+ VT++I+I G C  G  ++A  LF +M    + P+V+TF  LI G  +
Sbjct: 555 YNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 614

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             +     ++L  M  + V P+    + +V  L K+
Sbjct: 615 AGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 650



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 162/479 (33%), Positives = 249/479 (51%), Gaps = 46/479 (9%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            P+ VT+ +L+ GLC   RI EA     ++   GC PD  TY +LV  LCR S T  AL L
Sbjct: 635  PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 694

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              E+ +    FG   +P+TVTY  ++DGL K G  ++A  +L +M  K   P+VVTY ++
Sbjct: 695  VSELKS----FGW--DPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTL 748

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQ---PNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            I   C A D  EA+RL  +M  +  +   PNVVT++V+++ LCK G++DEA  L+  M++
Sbjct: 749  IDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMR 808

Query: 198  HG--VRPDAFTYNTLLDGFCLTGRVNHAKELFVSME--SMGCKHTVFSYSILINGYCKNK 253
                V P+  TYN+ LDG C    +  A EL  S+   S+       ++S LI+G CK  
Sbjct: 809  KSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 868

Query: 254  EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            + + A +++ +M++ G  P+VV +N L  GL +  ++ERA  + + M   GV  D  TY 
Sbjct: 869  QTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYS 928

Query: 314  TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR--SLP 371
              +D  CK  ++ EA+EL H +    C  ++  +NS+IDGLCKS +   A ++F   +L 
Sbjct: 929  VLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLK 988

Query: 372  CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD--------------------------- 404
             G L P+ +TY  +I GL   G   +A ++ LD                           
Sbjct: 989  HG-LAPDKITYCTLIDGLFRTGWAGQA-EVLLDAMPDPDTYAFNCCINGLSKLGDVSRAL 1046

Query: 405  --MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              M E  +VP+ +TF++LI G  +     +   L  +M   N+ PD      ++D L K
Sbjct: 1047 HRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 1105



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/502 (30%), Positives = 254/502 (50%), Gaps = 51/502 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     V   ++   + P+ +T+ +L+ GLC   ++  A A+   +   G  PDV TY
Sbjct: 374 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 433

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + LV+  C+ S    AL L   MA+        C PN VT+ +IIDGLCK    D++ E 
Sbjct: 434 SVLVDAFCKASRVDEALELLHGMASRG------CTPNVVTFNSIIDGLCKS---DRSGEA 484

Query: 122 LLQMKDKNIK----PNVVTYTSVIRGF--------------------CYA---------- 147
                D  +K    P+ +TY ++I G                      YA          
Sbjct: 485 FQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSK 544

Query: 148 -KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
             D + A +++  M++  + P+ VTFN+++   CK G  ++AS L + M+   ++PD  T
Sbjct: 545 LGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 604

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           +  L+DG C  G+V  A+++   M ++G    V +Y+ L++G CK+  IE A     EM+
Sbjct: 605 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 664

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           S G  PD + + +L   L    + + A +L  E++  G   DT TY   +DGL K+G   
Sbjct: 665 SSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTE 724

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV---LVPNVVTYS 383
           +A+ +   +       D+  YN+LID LCK+G LE A  L   +   V    VPNVVTYS
Sbjct: 725 QAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYS 784

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENA--VVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           ++I GLC  G++D+AR+L  +M   +  V+PN+IT++  + G  + +  ++  EL+  ++
Sbjct: 785 VLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR 844

Query: 442 E--INVMPDASIVSIVVDLLAK 461
           +  + V PD    S ++D L K
Sbjct: 845 DGSLRVSPDTVTFSTLIDGLCK 866



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 244/484 (50%), Gaps = 47/484 (9%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PDVFTYTTLVNGLCRTSH 73
           +SC  P+ VT++ LI GLC   RI EA  L  ++    C+  P++ TY + ++GLC+ S 
Sbjct: 280 RSC-VPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 338

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD----------------- 116
           T  A  L   + +G+    +   P+TVT++T+IDGLCK G +D                 
Sbjct: 339 TAEACELMRSLRDGS----LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPN 394

Query: 117 ------------------KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
                             +A  ++  M DK + P+V+TY+ ++  FC A   +EA  L  
Sbjct: 395 VITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 454

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM-IQHGVRPDAFTYNTLLDGFCLT 217
            M  +G  PNVVTFN I+D LCK+ +  EA ++ D M ++HG+ PD  TY TL+DG   T
Sbjct: 455 GMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRT 514

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           GR   A+ L  +M         ++++  ING  K  ++  AL +Y+ ML   + PD V  
Sbjct: 515 GRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTF 570

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N L  G  +    E+A  LF+EM    +  D  T+   IDGLCK G +  A ++   +  
Sbjct: 571 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 630

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
           L    ++  YN+L+ GLCKSGR+E A +    +     VP+ +TY  ++  LC   + D 
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 690

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  L  +++     P+ +T+++L+ G  +  +  + I +L +M      PD    + ++D
Sbjct: 691 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID 750

Query: 458 LLAK 461
            L K
Sbjct: 751 SLCK 754



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 139/405 (34%), Positives = 219/405 (54%), Gaps = 16/405 (3%)

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           V  Y  ++  LCR   T  AL +F  EMA      GV   P  VTY TII+GLCK   + 
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARD----GVA--PTIVTYNTIINGLCKSNELG 233

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
              EL  ++ ++   P+VVTY ++I   C A D  EA+RL  +M  +   PNVVT++V++
Sbjct: 234 AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLI 293

Query: 177 DELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLTGRVNHAKELFVSME--S 232
           + LCK G++DEA  L+  M +    V P+  TYN+ LDG C       A EL  S+   S
Sbjct: 294 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 353

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           +       ++S LI+G CK  +I+ A S++ +M++ G  P+V+ +N L  GL +  ++ER
Sbjct: 354 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 413

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  + + M   GV  D  TY   +D  CK   + EA+EL H +    C  ++  +NS+ID
Sbjct: 414 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473

Query: 353 GLCKSGRLEIALELFRSLPCG-VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           GLCKS R   A ++F  +     LVP+ +TY  +I GL   G+  +A  L   M +    
Sbjct: 474 GLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD---- 529

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           P+   F+  I G  ++ + S+ +++ ++M E+ ++PD    +I++
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILI 574



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/409 (34%), Positives = 217/409 (53%), Gaps = 21/409 (5%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGC-EPDV 58
            G+      VL  ++     PD VT+ +LI  LC    + EA  L   +  RV  C  P+V
Sbjct: 721  GQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNV 780

Query: 59   FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE--PNTVTYTTIIDGLCKEGFVD 116
             TY+ L+NGLC+      A  L +EM   +      C+  PN +TY + +DGLCK+  + 
Sbjct: 781  VTYSVLINGLCKVGRIDEARELIQEMMRKS------CDVLPNIITYNSFLDGLCKQSMMA 834

Query: 117  KAKELLLQMKDKNIK--PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
            +A EL+  ++D +++  P+ VT++++I G C     +EA  +F +M+  G  PNVVT+NV
Sbjct: 835  EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNV 894

Query: 175  IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
            +M+ LCK  KM+ A  +++ M+  GV PD  TY+ L+D FC    V+ A EL   M S G
Sbjct: 895  LMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRG 954

Query: 235  CKHTVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERA 293
            C   V +++ +I+G CK+ +   A  ++ +M L  G+ PD + + TL  GLF      +A
Sbjct: 955  CTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA 1014

Query: 294  FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
              L D M       DT+ +   I+GL K G +  A    H +  L+   D   +N LI G
Sbjct: 1015 EVLLDAMPD----PDTYAFNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAG 1067

Query: 354  LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
             CK+G  E A  LF  +    L P+V+T+  +I GLC  GQ++   D+ 
Sbjct: 1068 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 214/426 (50%), Gaps = 21/426 (4%)

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           +F++   +N L ++     A++LF             C PN  TY+T++    K G  D 
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRS------RLPPRCRPNHFTYSTLLRATYKAGG-DV 163

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI-EMMDQGVQPNVVTFNVIM 176
            + L    + ++   +V  Y  V++  C A +   A  +F  EM   GV P +VT+N I+
Sbjct: 164 ERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTII 223

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           + LCK+ ++     L + +++ G  PD  TYNTL+D  C  G +  A+ L   M S  C 
Sbjct: 224 NGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCV 283

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIHNTLFVGLFEIHQVERAF 294
             V +YS+LING CK   I+ A  L  EM  K   + P+++ +N+   GL +      A 
Sbjct: 284 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEAC 343

Query: 295 KLFDEMQRNG---VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           +L   + R+G   V+ DT T+ T IDGLCK G I EA  +F  +       ++  YN+L+
Sbjct: 344 ELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALV 402

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           +GLCK+ ++E A  +  S+    + P+V+TYS+++   C   ++D+A +L   M      
Sbjct: 403 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 462

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMK-EINVMPDASIVSIVVDLL------AKNEI 464
           PNV+TF+ +I G  + +   +  ++   M  +  ++PD      ++D L       + E 
Sbjct: 463 PNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEA 522

Query: 465 SLNSLP 470
            L+++P
Sbjct: 523 LLDAMP 528



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 210/418 (50%), Gaps = 23/418 (5%)

Query: 73  HTIVALNLFEEMANGNGEFG------VVCEPN----TVTYTTIIDGLCKEGFVDKAKELL 122
           H  VA  +  ++ +GN E G          P       ++   ++ L K G   KA +L 
Sbjct: 76  HPSVAAAILAQL-DGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLF 134

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
                   +PN  TY++++R   Y    +  + L      +    +V  +N+++  LC+ 
Sbjct: 135 RSRLPPRCRPNHFTYSTLLRAT-YKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRA 193

Query: 183 GKMDEASRLLDL----MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           G   E +R L++    M + GV P   TYNT+++G C +  +    ELF  +   G    
Sbjct: 194 G---ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPD 250

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +Y+ LI+  CK  ++E A  L+ +M S+   P+VV ++ L  GL ++ +++ A +L  
Sbjct: 251 VVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQ 310

Query: 299 EMQRNG--VAADTWTYRTFIDGLCKNGYIVEAVELFHTLR--ILKCEFDIRAYNSLIDGL 354
           EM R    V  +  TY +F+DGLCK     EA EL  +LR   L+   D   +++LIDGL
Sbjct: 311 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 370

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK G+++ A  +F  +  G  VPNV+TY+ ++ GLC   +M++A  +   M +  V P+V
Sbjct: 371 CKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 430

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           IT+ +L+  F + +   + +ELLH M      P+    + ++D L K++ S  +   F
Sbjct: 431 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMF 488


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 156/429 (36%), Positives = 245/429 (57%), Gaps = 13/429 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T   L+   C  S+   A++   KL   G EPD+FT+T+L+NG C  +    A+++ 
Sbjct: 105 DLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMV 164

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M     E G+  +P+ V YTTIID LCK G VD A  L  QM++  I+P+VV YTS++
Sbjct: 165 NQMV----EMGI--KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +  W +A  L   MM + ++P+V+TFN ++D   K GK+ +A  L + MIQ  + 
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+ FTY +L++G C+ GR++ A+++F  ME+ GC   V +Y+ LING+CK K++E A+ +
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EM  KG+  + + + TL  G   + +   A ++F  M   GV  +  TY   +  LC 
Sbjct: 339 FYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCY 398

Query: 322 NGYIVEAVELFHTLRILKCEFD-----IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           NG + +A+ +F  ++  K E D     IR YN L+ GLC +G+LE AL +F  +    + 
Sbjct: 399 NGKVNKALMIFEDMQ--KREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMD 456

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
             ++TY+I+I G+C  G++  A +LF  +    V PNV+T+  +I G  R     +   L
Sbjct: 457 IGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVL 516

Query: 437 LHKMKEINV 445
             KMKE  V
Sbjct: 517 FRKMKEDGV 525



 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 143/403 (35%), Positives = 230/403 (57%), Gaps = 9/403 (2%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LG+++K  F PD  TFTSLI G C  +RI EA ++  ++   G +PDV  YTT+++ LC+
Sbjct: 129 LGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCK 188

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
             H   AL+LF +M N    +G+   P+ V YT++++GLC  G    A  LL  M  + I
Sbjct: 189 NGHVDNALSLFNQMEN----YGI--RPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKI 242

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           KP+V+T+ ++I  F       +AK L+ EM+   + PN+ T+  +++ LC  G++DEA +
Sbjct: 243 KPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQ 302

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +  LM   G  PD   Y +L++GFC   +V  A ++F  M   G      +Y+ LI G+ 
Sbjct: 303 MFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFG 362

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR---NGVAA 307
              +   A  ++  M+S+G+ P++  +N L   L    +V +A  +F++MQ+   +GV  
Sbjct: 363 LVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPP 422

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  TY   + GLC NG + +A+ +F  ++    +  I  Y  +I G+CK+G+++ AL LF
Sbjct: 423 NIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLF 482

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
            SLP   + PNVVTY+ MI GL  +G M +A  LF  M+E+ V
Sbjct: 483 CSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 200/371 (53%), Gaps = 9/371 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     ++ ++++    PD V +T++I  LC    +  A +LF ++  +G  PDV  YT
Sbjct: 156 RIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYT 215

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +LVNGLC +     A  L   M           +P+ +T+  +ID   KEG +  AKEL 
Sbjct: 216 SLVNGLCNSGRWRDADLLLRGMMKRK------IKPDVITFNALIDAFVKEGKLLDAKELY 269

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M   +I PN+ TYTS+I G C     +EA+++F  M  +G  P+VV +  +++  CK 
Sbjct: 270 NEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 329

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K+++A ++   M Q G+  +  TY TL+ GF L G+ N A+E+F  M S G    + +Y
Sbjct: 330 KKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTY 389

Query: 243 SILINGYCKNKEIEGALSLYSEMLSK---GIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           ++L++  C N ++  AL ++ +M  +   G+ P++  +N L  GL    ++E+A  +F +
Sbjct: 390 NVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGD 449

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           MQ+  +     TY   I G+CK G + +A+ LF +L     + ++  Y ++I GL + G 
Sbjct: 450 MQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGL 509

Query: 360 LEIALELFRSL 370
           +  A  LFR +
Sbjct: 510 MLEAHVLFRKM 520



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 173/308 (56%), Gaps = 9/308 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR     ++L  ++K    PD +TF +LI     E ++++A  L+ ++      P++FTY
Sbjct: 225 GRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTY 284

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L+NGLC       A  +F  M          C P+ V YT++I+G CK   V+ A ++
Sbjct: 285 TSLINGLCMEGRLDEARQMFYLMETKG------CFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K +  N +TYT++I+GF      N A+ +F  M+ +GV PN+ T+NV++  LC 
Sbjct: 339 FYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCY 398

Query: 182 NGKMDEASRLLDLMIQH---GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           NGK+++A  + + M +    GV P+  TYN LL G C  G++  A  +F  M+       
Sbjct: 399 NGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIG 458

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           + +Y+I+I G CK  +++ AL+L+  + SKG+KP+VV + T+  GLF    +  A  LF 
Sbjct: 459 IITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFR 518

Query: 299 EMQRNGVA 306
           +M+ +GV+
Sbjct: 519 KMKEDGVS 526



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 174/338 (51%), Gaps = 9/338 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V +   +  ++      PD V +TSL+ GLC   R  +A  L   +     +PDV T+
Sbjct: 190 GHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITF 249

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++   +    + A  L+ EM        +   PN  TYT++I+GLC EG +D+A+++
Sbjct: 250 NALIDAFVKEGKLLDAKELYNEMIQ------MSIAPNIFTYTSLINGLCMEGRLDEARQM 303

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M+ K   P+VV YTS+I GFC  K   +A ++F EM  +G+  N +T+  ++     
Sbjct: 304 FYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGL 363

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM---GCKHT 238
            GK + A  +   M+  GV P+  TYN LL   C  G+VN A  +F  M+     G    
Sbjct: 364 VGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPN 423

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           + +Y++L++G C N ++E AL ++ +M  + +   ++ +  +  G+ +  +V+ A  LF 
Sbjct: 424 IRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFC 483

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            +   GV  +  TY T I GL + G ++EA  LF  ++
Sbjct: 484 SLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMK 521



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 190/367 (51%), Gaps = 1/367 (0%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           ++A +L   M +    P+++ +T ++      K ++    L   +   GV  ++ T N++
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           M+  C++ +   AS  L  +++ G  PD FT+ +L++GFCL  R+  A  +   M  MG 
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           K  V  Y+ +I+  CKN  ++ ALSL+++M + GI+PDVV++ +L  GL    +   A  
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L   M +  +  D  T+   ID   K G +++A EL++ +  +    +I  Y SLI+GLC
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC 292

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             GRL+ A ++F  +      P+VV Y+ +I G C   +++ A  +F +M +  +  N I
Sbjct: 293 MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTI 352

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
           T+  LI+GF  + +P+   E+   M    V P+    ++++  L  N     +L  F   
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE-D 411

Query: 476 EQQEEVD 482
            Q+ E+D
Sbjct: 412 MQKREID 418



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 199/389 (51%), Gaps = 9/389 (2%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           AL+LF  M            P+ + +T +++ + K    D    L   ++   +  ++ T
Sbjct: 55  ALDLFSHMVESRPL------PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYT 108

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
              ++  FC +     A     ++M  G +P++ TF  +++  C   +++EA  +++ M+
Sbjct: 109 CNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV 168

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G++PD   Y T++D  C  G V++A  LF  ME+ G +  V  Y+ L+NG C +    
Sbjct: 169 EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWR 228

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L   M+ + IKPDV+  N L     +  ++  A +L++EM +  +A + +TY + I
Sbjct: 229 DADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLI 288

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLC  G + EA ++F+ +    C  D+ AY SLI+G CK  ++E A+++F  +    L 
Sbjct: 289 NGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT 348

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKV 433
            N +TY+ +I G    G+ + A+++F  M    V PN+ T+++L+       ++N+   +
Sbjct: 349 GNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMI 408

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
            E + K +   V P+    ++++  L  N
Sbjct: 409 FEDMQKREIDGVPPNIRTYNVLLHGLCYN 437



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 167/306 (54%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y  ++R   ++  +NEA  LF  M++    P+++ F  +++ + K  K D    L   + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             GV  D +T N L++ FC + +   A      +  +G +  +F+++ LING+C    IE
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+S+ ++M+  GIKPDVVI+ T+   L +   V+ A  LF++M+  G+  D   Y + +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLC +G   +A  L   +   K + D+  +N+LID   K G+L  A EL+  +    + 
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN+ TY+ +I GLC +G++D+AR +F  ME     P+V+ +  LI GF +  +    +++
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 437 LHKMKE 442
            ++M +
Sbjct: 339 FYEMSQ 344



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 10/229 (4%)

Query: 243 SILINGYCKNKEI----------EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           S  +  +C  +EI            AL L+S M+     P ++    L   + ++ + + 
Sbjct: 30  SFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDV 89

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
              L   +Q  GV+ D +T    ++  C++     A      L  L  E DI  + SLI+
Sbjct: 90  VINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLIN 149

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G C   R+E A+ +   +    + P+VV Y+ +I  LC +G +D A  LF  ME   + P
Sbjct: 150 GFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRP 209

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +V+ +  L+ G            LL  M +  + PD    + ++D   K
Sbjct: 210 DVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVK 258


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 163/489 (33%), Positives = 256/489 (52%), Gaps = 31/489 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   + +    PD VT + L+  LC   +I EA  +F  + + G  PDVF+Y
Sbjct: 316 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 375

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGVV--------------------- 94
             ++NG       +   +LF+ M  G+G       F V+                     
Sbjct: 376 NIMLNGYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 434

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +P+ VTY T+I  LC+ G +D A E   QM D+ + P+   Y  +I+GFC      
Sbjct: 435 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 494

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +AK L  E+M+ G+  ++V F+ I++ LCK G++ +A  + DL +  G+ PDA  Y+ L+
Sbjct: 495 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 554

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+CL G++  A  +F +M S G +  V  Y  L+NGYCK   I+  LSL+ EML +GIK
Sbjct: 555 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 614

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P  ++++ +  GLF+  +   A   F EM  +G+A D  TY   + GL KN    EA+ L
Sbjct: 615 PSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 674

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  LR +  + +I   N++IDG+ ++ R+E A +LF S+    LVPNVVTYSIMI  L  
Sbjct: 675 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIK 734

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G +++A D+F  M+     PN    + ++R  ++ NE  +    L K+ E N   +   
Sbjct: 735 EGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 794

Query: 452 VSIVVDLLA 460
             ++VDL +
Sbjct: 795 AMLLVDLFS 803



 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 244/493 (49%), Gaps = 40/493 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R        G++L++    + +    L++G C   R  EA   L  +    GC PDVF+Y
Sbjct: 139 RPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSY 198

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+  LC    +  A +L   MA G    G VC PN V Y T+IDG  KEG V+KA +L
Sbjct: 199 SILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPNVVAYNTVIDGFFKEGDVNKACDL 254

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK--------------------------------- 148
             +M  + I P++VTY SV+   C A+                                 
Sbjct: 255 FKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSS 314

Query: 149 --DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W EA R+F EM    + P+VVT +++M  LCK GK+ EA  + D M   G  PD F+
Sbjct: 315 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 374

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YN +L+G+   G +    +LF  M   G     +++++LI  Y     ++ A+ +++EM 
Sbjct: 375 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 434

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G+KPDVV + T+   L  I +++ A + F++M   GVA D + Y   I G C +G ++
Sbjct: 435 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 494

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A EL   +       DI  ++S+I+ LCK GR+  A  +F       L P+ V YS+++
Sbjct: 495 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 554

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G C  G+M+KA  +F  M    + PNV+ +  L+ G+ +I    + + L  +M +  + 
Sbjct: 555 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 614

Query: 447 PDASIVSIVVDLL 459
           P   + SI++D L
Sbjct: 615 PSTILYSIIIDGL 627



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 194/383 (50%), Gaps = 5/383 (1%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR+   + A+ LF   A+   +   V  P + TY  ++D   +    + A     Q+   
Sbjct: 96  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 153

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDE 187
            ++ N++    ++ GFC AK  +EA  + +    + G  P+V ++++++  LC  GK  +
Sbjct: 154 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 213

Query: 188 ASRLLDLMIQHGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           A  LL +M + G    P+   YNT++DGF   G VN A +LF  M   G    + +Y+ +
Sbjct: 214 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 273

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++  CK + ++ A +   +M++K + P+   +N L  G     Q + A ++F EM+R+ +
Sbjct: 274 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 333

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D  T    +  LCK G I EA ++F T+ +     D+ +YN +++G    G L    +
Sbjct: 334 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 393

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           LF  +    + P+  T++++I    N G +DKA  +F +M ++ V P+V+T+  +I    
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 453

Query: 426 RINEPSKVIELLHKMKEINVMPD 448
           RI +    +E  ++M +  V PD
Sbjct: 454 RIGKMDDAMEKFNQMIDQGVAPD 476



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 164/338 (48%), Gaps = 9/338 (2%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P   TY  ++     A     A   F +++  G++ N++  N +++  C+  + DEA 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA- 178

Query: 190 RLLDLMIQH----GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYS 243
             LD+++      G  PD F+Y+ LL   C  G+   A +L   M   G  C   V +Y+
Sbjct: 179 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 236

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +I+G+ K  ++  A  L+ EM+ +GI PD+V +N++   L +   +++A     +M   
Sbjct: 237 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 296

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
            V  + WTY   I G    G   EAV +F  +R      D+   + L+  LCK G+++ A
Sbjct: 297 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 356

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++F ++      P+V +Y+IM+ G    G +    DLF  M  + + P+  TF++LI+ 
Sbjct: 357 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 416

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +       K + + ++M++  V PD      V+  L +
Sbjct: 417 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 454



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 169/360 (46%), Gaps = 41/360 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++        +++     PD   +  LI+G C    +++A  L +++   G   D+  
Sbjct: 455 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 514

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +++++N LC+    + A N+F+   N      V   P+ V Y+ ++DG C  G ++KA  
Sbjct: 515 FSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYSMLMDGYCLVGKMEKALR 568

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    I+PNVV Y +++ G+C     +E   LF EM+ +G++P+ + +++I+D L 
Sbjct: 569 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 628

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+   A      M + G+  D  TYN                                
Sbjct: 629 QAGRTVPAKMKFHEMTESGIAMDICTYN-------------------------------- 656

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
              I++ G  KN+  + A+ L+ E+ +  +K +++  NT+  G+F+  +VE A  LF  +
Sbjct: 657 ---IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI 713

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            R+ +  +  TY   I  L K G + EA ++F +++   CE + R  N ++  L K   +
Sbjct: 714 SRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 773



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 158/336 (47%), Gaps = 11/336 (3%)

Query: 2   GRVSHGFVV-----LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG ++     +  I+ +    D V F+S+I  LC   R+M+A  +F      G  P
Sbjct: 486 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 545

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D   Y+ L++G C       AL +F+ M +         EPN V Y T+++G CK G +D
Sbjct: 546 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG------IEPNVVVYCTLVNGYCKIGRID 599

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +   L  +M  + IKP+ + Y+ +I G   A     AK  F EM + G+  ++ T+N+++
Sbjct: 600 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L KN   DEA  L   +    V+ +  T NT++DG   T RV  AK+LF S+      
Sbjct: 660 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 719

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +YSI+I    K   +E A  ++S M + G +P+  + N +   L + +++ RA   
Sbjct: 720 PNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAY 779

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
             ++     + +  T    +D     G   E +   
Sbjct: 780 LSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 245/457 (53%), Gaps = 8/457 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V+    ++  + +    PD  T+T ++  LC   ++ EA  LF K+   GC  +   Y
Sbjct: 24  GKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAY 83

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGLC+  +   A  L EEMA+         EP+ +TY TI+ GLC+ G V +AK+ 
Sbjct: 84  NALINGLCKDENIERAYKLLEEMASKG------YEPDNITYNTILSGLCRMGKVSEAKQF 137

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF--IEMMDQGVQPNVVTFNVIMDEL 179
              M  +   P+VV Y  ++          EA  LF  ++M D+ V P+++T+N ++D  
Sbjct: 138 FDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGF 197

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+  K DEA +L   +I  G  PD  TYN++L G      ++ A+E+F  M   GC    
Sbjct: 198 CRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNG 257

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +YSI+++G+C+   +   L LY EM  K   PDV++ N +   L +  +V+ A K+ +E
Sbjct: 258 ATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEE 317

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M + G   D  TY   +DGLCK   + +A ELF T+    C  DI +Y+ +++GLCK+ +
Sbjct: 318 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 377

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A  LF  +    LVP+VVT++I++ GLC  G++D+A+DL   M E+ V+P+ +T   
Sbjct: 378 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTT 437

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           L+ G  R     + + L   M E   + D    +IV+
Sbjct: 438 LMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVL 474



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/453 (33%), Positives = 238/453 (52%), Gaps = 12/453 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPDV 58
           MG+VS        +    ++PD V +  L+  L  E ++ EA  LF  + +      PD+
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
            TY TL++G CR   T  A+ LF++ +A G         P+TVTY +I+ GL ++  +D+
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGY-------MPDTVTYNSILLGLARKSNMDE 240

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A+E+  +M D    PN  TY+ V+ G C   +      L+ EM ++   P+V+  N ++D
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LCK  K+D+A ++L+ M + G  PD  TYN LLDG C T  V+ A ELF +M   GC  
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            + SYS+++NG CK  ++  A  L+  M+ + + PDVV  N L  GL +  +++ A  L 
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           D M  + V  D  T  T + GLC++    EAV LF  +       D+  +N ++ GLC+ 
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCRE 480

Query: 358 GRLEIALELFRSL--PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           G+L  AL  F+S+    G   P+VVTY+ ++  L   G++D+A D F  M  +   P+ +
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYV 540

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            ++ L+ G  +     +   L   MKE   + D
Sbjct: 541 AYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 137/411 (33%), Positives = 233/411 (56%), Gaps = 8/411 (1%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G EPDV TY+T+++GLC+T     AL + EEM     E GV   P+  TYT I+D LC+ 
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMT----EKGV--NPDVATYTIIVDRLCRA 58

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G VD+A EL  +M ++    N V Y ++I G C  ++   A +L  EM  +G +P+ +T+
Sbjct: 59  GKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N I+  LC+ GK+ EA +  D M   G  PD   YN LLD     G+V  A  LF +M+ 
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178

Query: 233 MGCK--HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              K    + +Y+ LI+G+C+ ++ + A+ L+ ++++KG  PD V +N++ +GL     +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           + A ++F +M  +G A +  TY   + G C+ G +   +EL+  +   +   D+   N++
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ID LCK+ +++ A ++   +     VP+VVTY+I++ GLC    +DKA +LF  M +N  
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            P+++++ +++ G  + N+      L  +M E  ++PD    +I++D L K
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 409



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 173/304 (56%), Gaps = 2/304 (0%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M ++G +P+VVT++ I+  LCK GK+ EA  +++ M + GV PD  TY  ++D  C  G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           V+ A ELF  M   GC     +Y+ LING CK++ IE A  L  EM SKG +PD + +NT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL- 338
           +  GL  + +V  A + FD M   G + D   Y   +D L K G + EA  LF T+ +  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 339 -KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
            K   D+  YN+LIDG C+  + + A++LF+ +     +P+ VTY+ ++ GL     MD+
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A ++F  M ++   PN  T+ +++ G  R+   ++ +EL  +M E    PD  + + V+D
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 458 LLAK 461
           +L K
Sbjct: 301 MLCK 304



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 8/205 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V    V+  R+++    PD VTF  L+ GLC   ++ EA  L   +      PD  T T
Sbjct: 377 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCT 436

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++GLCR   T  A+ LF+ M     E G V +   + +  ++ GLC+EG + +A    
Sbjct: 437 TLMHGLCRDKRTDEAVRLFQYMV----EKGTVAD--VLPHNIVLAGLCREGKLAQALLFF 490

Query: 123 LQM--KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
             M   D    P+VVTYT+++     A   ++A   F +M   G  P+ V +N +M+ L 
Sbjct: 491 KSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLR 550

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAF 205
           K G+  +A RL   M + G   D F
Sbjct: 551 KQGRHIQADRLTQAMKEKGFLSDCF 575


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 153/468 (32%), Positives = 248/468 (52%), Gaps = 6/468 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++    +  ++L S  TP  V +TSLI GLC  +   +A  LF  +   GC P   TY
Sbjct: 24  GKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTY 83

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++  C+      A +L ++M     E G V  P+ VTY T++DGLCK   V++A  L
Sbjct: 84  NVMIDASCKRGMLEEACDLIKKMI----EDGHV--PDVVTYNTVMDGLCKSSRVEEALLL 137

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+     PN  ++ ++I G C     ++A ++F EM  + + P+  ++ +++D L K
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAK 197

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK++EA +L   M+  G+ P A TYN ++ G CL   ++ A ELF SM S GC+ + F+
Sbjct: 198 AGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFT 257

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILI+ +CK  +++ A  L   M   G  PDVV ++TL  GL  I +V+ A  L ++M 
Sbjct: 258 FNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +        T  T I GLCK G I EA E+   +       D+  YN+L+ G C++G+ E
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 377

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL   +    L PNVVTY+ ++ GLC   ++ +A  +F  M+ +   PN+ T+  LI
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            GF    +    ++L  +M    + PD  +   +   L K+  S  +L
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/399 (35%), Positives = 218/399 (54%), Gaps = 6/399 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++ ++++    PD VT+ +++ GLC  SR+ EA  LF ++   GC P+  ++ T++ GLC
Sbjct: 102 LIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLC 161

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           + S    A  +F EM   +        P++ +Y  +IDGL K G +++A +L  +M D  
Sbjct: 162 QQSKIDQACQVFHEMEAKD------IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG 215

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I P+ VTY  VI G C A   +EA  LF  M  +G +P+  TFN+++D  CK GK+DEA 
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAF 275

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           RLL  M   G  PD  TY+TL+ G C   RV+ A+ L   M    CK TV + + LI+G 
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK   I+ A  +   M+S G  PDVV +NTL  G     Q ERA +L  +M   G+A + 
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   + GLCK   + EA  +F  ++   C  ++  Y +LI G C +G+++  L+LF  
Sbjct: 396 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 455

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           + C  + P+ V Y  +   LC  G+  +A ++  +  E+
Sbjct: 456 MVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 226/429 (52%), Gaps = 6/429 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD+ ++  LI GL    ++ +A  LF KL   G  P    YT+L++GLC  +    A  
Sbjct: 7   SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF +M N  G     C P+ VTY  +ID  CK G +++A +L+ +M +    P+VVTY +
Sbjct: 67  LFADM-NRRG-----CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V+ G C +    EA  LF EM   G  PN  + N I+  LC+  K+D+A ++   M    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD+++Y  L+DG    G++N A +LF  M   G   +  +Y+++I+G C    ++ AL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  M SKG +P     N L     +  +++ AF+L   M  +G   D  TY T I GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C    + +A  L   +   +C+  +   N+LI GLCK+GR++ A E+  ++      P+V
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTY+ ++ G C  GQ ++AR+L  DM    + PNV+T+  L+ G  + N   +   +  +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 440 MKEINVMPD 448
           MK     P+
Sbjct: 421 MKSSGCAPN 429



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/414 (32%), Positives = 212/414 (51%), Gaps = 23/414 (5%)

Query: 3   RVSHGFVVLG-----RILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFT 47
           R SH  ++LG     +I ++C            PD+ ++  LI GL    ++ EA  LF 
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQ 209

Query: 48  KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIID 107
           ++   G  P   TY  +++G+C       AL LF+ M +        C P+  T+  +ID
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG------CRPSRFTFNILID 263

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
             CK G +D+A  LL +M D    P+VVTY+++I G C     ++A+ L  +M+ +  +P
Sbjct: 264 AHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
            VVT N ++  LCK G++ EA  +LD M+  G  PD  TYNTL+ G C  G+   A+EL 
Sbjct: 324 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 383

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M + G    V +Y+ L++G CK   +  A  ++++M S G  P++  +  L +G    
Sbjct: 384 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR-ILKCE-FDIR 345
            QV+   KLF EM   G++ D   Y T    LCK+G    A+E+    R  L+ E +   
Sbjct: 444 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDE 503

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            Y   +DGL ++G++E+AL   R +  G  +P     + ++ GLC  GQ  +AR
Sbjct: 504 VYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEAR 557



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 163/300 (54%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M ++ V P+  ++ +++D L K GK+++A  L   ++  GV P    Y +L+ G C+   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
            + A+ELF  M   GC  +  +Y+++I+  CK   +E A  L  +M+  G  PDVV +NT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  GL +  +VE A  LF+EM+R G   +  ++ T I GLC+   I +A ++FH +    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D  +Y  LIDGL K+G+L  A +LF+ +    + P+ VTY+++I G+C    +D+A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +LF  M      P+  TF++LI    +  +  +   LL +M +   +PD    S ++  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 16/272 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV     +L  ++K    P  VT  +LI GLC   RI EA  +   +   G  PDV T
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y TLV+G CR   T  A  L  +M A G         PN VTYT ++ GLCK   + +A 
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARG-------LAPNVVTYTALVSGLCKANRLPEAC 415

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  QMK     PN+ TYT++I GFC A   +   +LF EM+  G+ P+ V +  +  EL
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475

Query: 180 CKNGKMDEASRLLDLMIQ--HGVRPDAF---TYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           CK+G+   ++R L+++ +    +R +A+    Y   +DG    G++  A      M   G
Sbjct: 476 CKSGR---SARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGG 532

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                   + L+ G CK+ +   A ++  E++
Sbjct: 533 QLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 49/201 (24%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +L  ++     P+ VT+T+L+ GLC  +R+ EA  +F +++  GC P++FTY
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 433

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC---EPNTVTYTTIIDGLCKEGFVDKA 118
           T L+ G C        L LF EM         VC    P+ V Y T+   LCK G   +A
Sbjct: 434 TALILGFCSAGQVDGGLKLFGEM---------VCAGISPDHVVYGTLAAELCKSGRSARA 484

Query: 119 KELLLQMKDK-------------------------------------NIKPNVVTYTSVI 141
            E+L + ++                                         P      S++
Sbjct: 485 LEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLV 544

Query: 142 RGFCYAKDWNEAKRLFIEMMD 162
            G C +    EA+ +  E+MD
Sbjct: 545 AGLCKSGQGGEARAVLEEIMD 565



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%)

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D  +Y  LIDGL K+G+L  A  LF+ L    + P+ V Y+ +I GLC     D AR+LF
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            DM      P+ +T++++I    +     +  +L+ KM E   +PD    + V+D L K+
Sbjct: 69  ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 247/459 (53%), Gaps = 9/459 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G   L R++     PD +  TSLI+G C   +  +A  +   L   G  PDV TY
Sbjct: 120 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITY 179

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G C++     AL + E M+           P+ VTY TI+  LC  G + +A E+
Sbjct: 180 NVLIGGYCKSGEIDKALEVLERMS---------VAPDVVTYNTILRSLCDSGKLKEAMEV 230

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +   +   P+V+TYT +I   C      +A +L  EM  +G +P+VVT+NV+++ +CK
Sbjct: 231 LDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 290

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA + L+ M  +G +P+  T+N +L   C TGR   A+ L   M   GC  +V +
Sbjct: 291 EGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVT 350

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILIN  C+ + +  A+ +  +M   G  P+ + +N L  G  +  +++RA +  + M 
Sbjct: 351 FNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 410

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY T +  LCK+G +  AVE+ + L    C   +  YN++IDGL K G+ E
Sbjct: 411 SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 470

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+EL   +    L P+++TYS ++ GL  +G++D+A  +F DME  ++ P+ +T++ ++
Sbjct: 471 YAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 530

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            G  +  + S+ I+ L  M E    P  +  +I+++ +A
Sbjct: 531 LGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIA 569



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 187/385 (48%), Gaps = 32/385 (8%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF----------- 157
           L + G +++  + L +M  +   P+V+  TS+IRGFC +    +A R+            
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 158 --------------------IEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
                               +E++++  V P+VVT+N I+  LC +GK+ EA  +LD  +
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQL 235

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           Q    PD  TY  L++  C    V  A +L   M   GCK  V +Y++LING CK   ++
Sbjct: 236 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLD 295

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+   + M S G KP+V+ HN +   +    +   A +L  +M R G +    T+   I
Sbjct: 296 EAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILI 355

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           + LC+   +  A+++   +    C  +  +YN L+ G C+  +++ A+E    +      
Sbjct: 356 NFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY 415

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P++VTY+ ++  LC DG++D A ++   +      P +IT++ +I G  ++ +    +EL
Sbjct: 416 PDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVEL 475

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
           L +M+   + PD    S ++  L +
Sbjct: 476 LEEMRRKGLKPDIITYSTLLRGLGR 500



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 153/277 (55%), Gaps = 3/277 (1%)

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N+ + +L +NG+++E  + L+ MI  G  PD     +L+ GFC +G+   A  +   +E+
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G    V +Y++LI GYCK+ EI+ AL +   M    + PDVV +NT+   L +  +++ 
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A ++ D   +     D  TY   I+  C +  + +A++L   +R   C+ D+  YN LI+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G+CK GRL+ A++   ++P     PNV+T++I++  +C+ G+   A  L  DM      P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           +V+TF++LI    R     + I++L KM +   +P++
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 3/217 (1%)

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           F+ +I +    +N E+E  L     M+ +G  PDV+   +L  G     + ++A ++ + 
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           ++ +G   D  TY   I G CK+G I +A+E+   + +     D+  YN+++  LC SG+
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAP---DVVTYNTILRSLCDSGK 223

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A+E+          P+V+TY+I+I   CND  + +A  L  +M +    P+V+T+++
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           LI G  +     + I+ L+ M      P+    +I++
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIIL 320



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 24/143 (16%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+  +   +L  + +    PD +T+++L++GL  E ++ EA  +F  +     +P   T
Sbjct: 466 VGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVT 525

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL----------- 109
           Y  ++ GLC+   T  A++    M          C+P   TYT +I+G+           
Sbjct: 526 YNAIMLGLCKAQQTSRAIDFLAYMVEKG------CKPTEATYTILIEGIADEGLAEEALE 579

Query: 110 -----CKEGFVDK--AKELLLQM 125
                C  GFV K  A++++++M
Sbjct: 580 LLNELCSRGFVKKSSAEQVVVKM 602



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           F+  A N  +  L ++G LE  L+    +     +P+V+  + +I G C  G+  KA  +
Sbjct: 104 FEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRI 163

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
              +E +  VP+VIT+++LI G+ +  E  K +E+L +M   +V PD
Sbjct: 164 MEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPD 207


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/444 (33%), Positives = 242/444 (54%), Gaps = 11/444 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA T+T LI+GLC   R+ +A +L   +    C+P V TYT L+  +C++S    A+ +
Sbjct: 135 PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKV 194

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            +EM A G       C PN VTY  II+G+C+E  VD A+++L ++     +P+ V+YT+
Sbjct: 195 LDEMRAKG-------CTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTT 247

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C AK W + + LF EM++    PN VTF++++   C+ G ++ A  +LD M +HG
Sbjct: 248 VLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHG 307

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
              +    N +++  C  GRV+ A E   +M S GC     SY+ ++ G C+    E A 
Sbjct: 308 CTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAK 367

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L +EM+ K   P+ V  NT    L +   +++A  L ++M   G +    TY   ++G 
Sbjct: 368 ELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGF 427

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C  G +  A+ELF++L    CE +   Y +L+ GLC + RL+ A EL   +       NV
Sbjct: 428 CVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNV 484

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT+++++   C  G +++A +L   M E+   PN+ITF+ L+ G        + +ELLH 
Sbjct: 485 VTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHG 544

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           +    +  D    S +VD+L++ +
Sbjct: 545 LVSKGISLDTITYSSIVDVLSRED 568



 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 227/473 (47%), Gaps = 47/473 (9%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD    T LI+ LC   R  +AA +       G   DVF Y TLV G CR      A  
Sbjct: 67  APDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARR 126

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M            P+  TYT +I GLC  G V  A  LL  M  +  +P+VVTYT 
Sbjct: 127 LIASMP---------VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTV 177

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++   C +  + +A ++  EM  +G  PN+VT+NVI++ +C+  ++D+A ++L+ +  +G
Sbjct: 178 LLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYG 237

Query: 200 VRPDAFTYNTLLDG-----------------------------------FCLTGRVNHAK 224
            +PD  +Y T+L G                                   FC  G V  A 
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAI 297

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           E+   M   GC       +I+IN  CK   ++ A    + M S G  PD + + T+  GL
Sbjct: 298 EVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGL 357

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               + E A +L +EM R     +  T+ TFI  LC+ G I +A+ L   +    C   I
Sbjct: 358 CRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGI 417

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN+L++G C  GR++ ALELF SLPC    PN +TY+ ++ GLC+  ++D A +L  +
Sbjct: 418 VTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAE 474

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           M +N    NV+TF++L+  F +     + IEL+ +M E    P+    + ++D
Sbjct: 475 MMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLD 527



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 222/424 (52%), Gaps = 9/424 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     +L R+    F PD V++T+++KGLCA  R  +   LF ++    C P+  T+ 
Sbjct: 222 RVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFD 281

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LV   CR      A+ + + M+    E G  C  NT     +I+ +CK+G VD A E L
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMS----EHG--CTANTTLCNIVINSICKQGRVDDAFEFL 335

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M      P+ ++YT+V++G C A  W +AK L  EM+ +   PN VTFN  +  LC+ 
Sbjct: 336 NNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQK 395

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +D+A  L++ M ++G      TYN L++GFC+ GRV+ A ELF    S+ C+    +Y
Sbjct: 396 GLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELF---NSLPCEPNTITY 452

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + L+ G C  + ++ A  L +EM+      +VV  N L     +   VE A +L  +M  
Sbjct: 453 TTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMME 512

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G   +  T+ T +DG+ ++    EA+EL H L       D   Y+S++D L +  R+E 
Sbjct: 513 HGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEE 572

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+++F ++    + P  V Y+ ++  LC   + D+A D F  M  N+ +PN  T+ +LI 
Sbjct: 573 AVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIE 632

Query: 423 GFIR 426
           G  R
Sbjct: 633 GLAR 636



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 166/327 (50%), Gaps = 9/327 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F  L  +     +PD +++T+++KGLC   R  +A  L  ++    C P+  T+
Sbjct: 326 GRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTF 385

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T +  LC+      A+ L E+M     E+G  C    VTY  +++G C +G VD A EL
Sbjct: 386 NTFICILCQKGLIDQAILLIEQMP----EYG--CSVGIVTYNALVNGFCVQGRVDSALEL 439

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +     +PN +TYT+++ G C+A+  + A  L  EMM      NVVTFNV++   C+
Sbjct: 440 FNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQ 496

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++EA  L+  M++HG  P+  T+NTLLDG         A EL   + S G      +
Sbjct: 497 KGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTIT 556

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +++   +   IE A+ ++  +   G++P  V++N +   L +  + +RA   F  M 
Sbjct: 557 YSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMV 616

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEA 328
            N    +  TY   I+GL + G + EA
Sbjct: 617 SNSCMPNESTYVILIEGLAREGLLKEA 643



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 154/308 (50%), Gaps = 9/308 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +L  +++    P+ VTF + I  LC +  I +A  L  ++  +GC   + TY
Sbjct: 361 GRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTY 420

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LVNG C       AL LF  +          CEPNT+TYTT++ GLC    +D A EL
Sbjct: 421 NALVNGFCVQGRVDSALELFNSLP---------CEPNTITYTTLLTGLCHAERLDAAAEL 471

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M   +   NVVT+  ++  FC      EA  L  +MM+ G  PN++TFN ++D + +
Sbjct: 472 LAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITE 531

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +   +EA  LL  ++  G+  D  TY++++D      R+  A ++F +++ MG +     
Sbjct: 532 DCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVM 591

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +++  CK  E + A+  ++ M+S    P+   +  L  GL     ++ A  +  E+ 
Sbjct: 592 YNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELC 651

Query: 302 RNGVAADT 309
             GV + +
Sbjct: 652 SRGVLSKS 659



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 140/278 (50%), Gaps = 3/278 (1%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           + EA+RL++     G  PD +    L+   C  GR + A  +  + E  G    VF+Y+ 
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L+ GYC+   ++ A  L + M    + PD   +  L  GL +  +V  A  L D+M R  
Sbjct: 111 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
                 TY   ++ +CK+    +A+++   +R   C  +I  YN +I+G+C+  R++ A 
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           ++   L      P+ V+Y+ ++ GLC   + +    LF +M EN  VPN +TFDML+R F
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            R     + IE+L +M E     + ++ +IV++ + K 
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQ 325



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 3/324 (0%)

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           +S +R      D  EA RL      +G  P+V     ++  LC+ G+  +A+R+L     
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G   D F YNTL+ G+C  GR++ A+ L  SM         ++Y+ LI G C    +  
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPLIRGLCDRGRVGD 155

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           ALSL  +ML +  +P VV +  L   + +     +A K+ DEM+  G   +  TY   I+
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G+C+   + +A ++ + L     + D  +Y +++ GLC + R E    LF  +     VP
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVP 275

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           N VT+ +++   C  G +++A ++   M E+    N    +++I    +        E L
Sbjct: 276 NEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL 335

Query: 438 HKMKEINVMPDASIVSIVVDLLAK 461
           + M      PD    + V+  L +
Sbjct: 336 NNMGSYGCSPDTISYTTVLKGLCR 359


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/448 (34%), Positives = 245/448 (54%), Gaps = 12/448 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L S  +P+ VTF  LI+G C   + M A      L  F   PDV+ +  L++GL +  +
Sbjct: 53  LLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGN 112

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK-- 131
              A+ LFE M +         +P  VTY T+I GLCK G ++KA+ELL +M  K  K  
Sbjct: 113 PDQAVKLFENMESSR------VKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSA 166

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P++VTY ++I  F  A    EA     +M   G+ P+V+T N+++  +CK+G ++EA  +
Sbjct: 167 PDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEI 226

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           LD M   G  PD  TYN+++   C+ G+V  A E+   +++M C   + +++ L++G+CK
Sbjct: 227 LDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI---LKTMSCSPDLVTFNTLLDGFCK 283

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              +  AL +  EM  + I PDV+ +  L  GL  + QV+ AF L +E+ R G   D   
Sbjct: 284 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 343

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y + +DGLCK+G I EA +L   + +  C   +  Y+SL+ G C++G +  A E+   + 
Sbjct: 344 YTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              +VP + TY+I++GGL  DG + KA  L  D+     VP+V+T++ LI G  + N   
Sbjct: 404 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 463

Query: 432 KVIELLHKMKEINVMP-DASIVSIVVDL 458
           +  +L  +M      P D ++ S+V  L
Sbjct: 464 EACDLADEMASRGCFPNDVTLGSVVFGL 491



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 219/445 (49%), Gaps = 9/445 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD VT+ +LI      SRI EA A   K++  G  PDV T   LV+G+C+      AL 
Sbjct: 166 APDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALE 225

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + + M       G V  P+ +TY +II  LC  G V +A E+L  M   +  P++VT+ +
Sbjct: 226 ILDGMKLA----GPV--PDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNT 276

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ GFC A     A  +  EM  + + P+V+T+ ++++ LC+ G++  A  LL+ +++ G
Sbjct: 277 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 336

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   Y +L+DG C +G +  A +L   M   GC+  V  YS L++GYC+   +  A 
Sbjct: 337 YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAR 396

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + +EM+S  + P +  +N +  GL +   + +A  L  ++   G   D  TY T IDGL
Sbjct: 397 EILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 456

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   + EA +L   +    C  +     S++ GLC+ GR++ A  L   +      PNV
Sbjct: 457 CKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNV 516

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           V Y+ +I GLC   +MD A  +   M    V  +   +  LI         ++ + +  +
Sbjct: 517 VVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDE 576

Query: 440 MKEINVMPDASIVSIVVDLLAKNEI 464
           M     +PD S    + +    N +
Sbjct: 577 MVARGFLPDGSTSKTLEEAAMSNSV 601



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 182/338 (53%), Gaps = 15/338 (4%)

Query: 6   HGFVVLGRILK--------SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD 57
           H   V G++++        SC +PD VTF +L+ G C    +  A  +  ++      PD
Sbjct: 247 HALCVAGKVVEAAEILKTMSC-SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           V TYT LVNGLCR     VA  L EE+       G +  P+ + YT+++DGLCK G +++
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIVRQ----GYI--PDVIAYTSLVDGLCKSGEIEE 359

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A +L+ +M  +  +  VV Y+S++ G+C A + ++A+ +  EM+   + P + T+N+++ 
Sbjct: 360 AHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLG 419

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            L K+G + +A  L+  ++  G  PD  TYNTL+DG C   RV  A +L   M S GC  
Sbjct: 420 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFP 479

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              +   ++ G C+   ++ A SL  EM  K   P+VV++ +L  GL +  +++ A  + 
Sbjct: 480 NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVL 539

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           D M+  GVA D + YR  I  +   G + EA+ ++  +
Sbjct: 540 DAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEM 577



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 202/408 (49%), Gaps = 14/408 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L  +  +   PD +T+ S+I  LC   +++EAA +   L+   C PD+ T+
Sbjct: 218 GDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI---LKTMSCSPDLVTF 274

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+      AL + EEM   N        P+ +TYT +++GLC+ G V  A  L
Sbjct: 275 NTLLDGFCKAGMLPRALEVLEEMCREN------ILPDVITYTILVNGLCRVGQVQVAFYL 328

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++  +   P+V+ YTS++ G C + +  EA +L  EM  +G +  VV ++ ++   C+
Sbjct: 329 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCR 388

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A  +L  M+   + P  FTYN +L G    G ++ A  L   + + G    V +
Sbjct: 389 AGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 448

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G CK   +  A  L  EM S+G  P+ V   ++  GL  + +V+ A+ L  EM 
Sbjct: 449 YNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 508

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R   A +   Y + IDGLCK+  + +A  +   +R      D  AY  LI  +   GR+ 
Sbjct: 509 RKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVA 568

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
            A+ ++  +     +P+  T   +      +  M  +   + ++EENA
Sbjct: 569 EAMAMYDEMVARGFLPDGSTSKTL-----EEAAMSNSVFEWTNLEENA 611



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 196/379 (51%), Gaps = 15/379 (3%)

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R+S   +A+  F+     +G      + +  +Y  ++D L K G   +  ++   +    
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGY-----KHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSG 57

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PN+VT+  +IRG C A     A      + +  V P+V  FNV++  L K+G  D+A 
Sbjct: 58  CSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAV 117

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT--VFSYSILIN 247
           +L + M    V+P+  TYNT++ G C +G +  A+EL   M   G K    + +Y+ LIN
Sbjct: 118 KLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLIN 177

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
            + +   I  A +   +M + GI PDV+  N L  G+ +   VE A ++ D M+  G   
Sbjct: 178 AFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVP 237

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D  TY + I  LC  G +VEA E+   L+ + C  D+  +N+L+DG CK+G L  ALE+ 
Sbjct: 238 DVITYNSIIHALCVAGKVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVL 294

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    ++P+V+TY+I++ GLC  GQ+  A  L  ++     +P+VI +  L+ G  + 
Sbjct: 295 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 354

Query: 428 NEPSKVIELLHKM-KEINV 445
            E    IE  HK+ KE++V
Sbjct: 355 GE----IEEAHKLVKEMSV 369



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 169/310 (54%), Gaps = 5/310 (1%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +++ +++  G  PN+VTF +++   CK G+   A   L  + +  V PD + +N L+ G 
Sbjct: 48  KVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGL 107

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--P 272
              G  + A +LF +MES   K  + +Y+ +I+G CK+  +E A  L  EM+ KG K  P
Sbjct: 108 FKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAP 167

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D+V +NTL    +   ++  A    ++M+  G+  D  T    + G+CK+G + EA+E+ 
Sbjct: 168 DIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEIL 227

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +++     D+  YNS+I  LC +G++  A E+ +++ C    P++VT++ ++ G C  
Sbjct: 228 DGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKA 284

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G + +A ++  +M    ++P+VIT+ +L+ G  R+ +      LL ++     +PD    
Sbjct: 285 GMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 344

Query: 453 SIVVDLLAKN 462
           + +VD L K+
Sbjct: 345 TSLVDGLCKS 354



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 142/280 (50%), Gaps = 6/280 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V   F +L  I++  + PD + +TSL+ GLC    I EA  L  ++ V GC   V  
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y++LV+G CR  +   A  +  EM + N        P   TY  ++ GL K+G + KA  
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVSIN------MVPPLFTYNIVLGGLIKDGSISKAVS 432

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+  +  +   P+VVTY ++I G C A    EA  L  EM  +G  PN VT   ++  LC
Sbjct: 433 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLC 492

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G++D+A  L+  M +    P+   Y +L+DG C + R++ A  +  +M   G     F
Sbjct: 493 RVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDF 552

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           +Y  LI        +  A+++Y EM+++G  PD     TL
Sbjct: 553 AYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 40/302 (13%)

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           Q G + D  +YN LLD    +G      +++  +   GC   + ++ ILI G CK  +  
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL     +    + PDV I N L  GLF+    ++A KLF+ M+ + V  +  TY T I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139

Query: 317 DGLCKNGYIVEAVELFHTL--RILKCEFDIRAYNSLID---------------------- 352
            GLCK+G + +A EL   +  +  K   DI  YN+LI+                      
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAG 199

Query: 353 -------------GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
                        G+CK G +E ALE+   +     VP+V+TY+ +I  LC  G++ +A 
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA 259

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           ++   M   +  P+++TF+ L+ GF +     + +E+L +M   N++PD    +I+V+ L
Sbjct: 260 EILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 316

Query: 460 AK 461
            +
Sbjct: 317 CR 318



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 65/122 (53%)

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D+ +YN L+D L KSG      ++++ L      PN+VT+ I+I G C  GQ  +A +
Sbjct: 24  KHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALE 83

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
               ++E +V P+V  F++LI G  +   P + ++L   M+   V P+    + V+  L 
Sbjct: 84  FLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLC 143

Query: 461 KN 462
           K+
Sbjct: 144 KS 145


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 163/489 (33%), Positives = 253/489 (51%), Gaps = 31/489 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   + +    PD VTF  L+  LC   +I EA  +F  + + G  PDVF+Y
Sbjct: 303 GQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC-------------------------- 95
             ++NG       +   +LF+ M  G+G   V+C                          
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 421

Query: 96  ----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +PN +TYTT+I  LC+ G +D A E   QM D+ + P+   Y  +I+GFC      
Sbjct: 422 DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +AK L  E+M+ G+  ++V F+ I++ LCK G++ +A  + DL +  G+ P A  Y+ L+
Sbjct: 482 KAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+CL G++  A  +F +M S G +     Y  L+NGYCK   I+  LSL+ EML KGIK
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P  +++N +  GLFE  +   A   F EM  +G+A +  TY   + GL KN    EA+ L
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 661

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  LR +  + DI   N++I G+ ++ R+E A +LF S+    LVP VVTYSIMI  L  
Sbjct: 662 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G +++A D+F  M+     P+    + ++R  ++ NE  +    L K+ E N   +   
Sbjct: 722 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 781

Query: 452 VSIVVDLLA 460
             ++VDL +
Sbjct: 782 TMLLVDLFS 790



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 244/493 (49%), Gaps = 40/493 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R        G++L++    D +    L+KG C   R  EA   L  +    GC PDVF+Y
Sbjct: 126 RPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 185

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+  LC    +  A +L   MA G    G VC P+ V Y T+IDG  KEG V+KA +L
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPDVVAYNTVIDGFFKEGDVNKACDL 241

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK--------------------------------- 148
             +M  + I P+ VTY+SV+   C A+                                 
Sbjct: 242 FKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSS 301

Query: 149 --DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W EA R+F EM  Q + P+VVTFN++M  LCK GK+ EA  + D M   G  PD F+
Sbjct: 302 TGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YN +L+G+   G +    +LF  M   G    + ++++LI  Y     ++ A+ +++EM 
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 421

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G+KP+V+ + T+   L  I +++ A + F++M   GVA D + Y   I G C +G ++
Sbjct: 422 DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A EL   +       DI  ++S+I+ LCK GR+  A  +F       L P  V YS+++
Sbjct: 482 KAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G C  G+M+KA  +F  M    + PN + +  L+ G+ +I    + + L  +M +  + 
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 447 PDASIVSIVVDLL 459
           P   + +I++D L
Sbjct: 602 PSTILYNIIIDGL 614



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 195/383 (50%), Gaps = 5/383 (1%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR+   + A+ LF   A+   +   V  P + TY  ++D   +    + A     Q+   
Sbjct: 83  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 140

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDE 187
            ++ +++    +++GFC AK  +EA  + +    + G  P+V ++++++  LC  GK  +
Sbjct: 141 GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200

Query: 188 ASRLLDLMIQHGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           A  LL +M + G    PD   YNT++DGF   G VN A +LF  M   G      +YS +
Sbjct: 201 ADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++  CK + ++ A +   +M++KG+ P+   +N L  G     Q + A ++F EM+R  +
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 320

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D  T+   +  LCK G I EA ++F T+ +     D+ +YN +++G    G L    +
Sbjct: 321 LPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           LF  +    + P + T++++I    N G +DKA  +F +M ++ V PNV+T+  +I    
Sbjct: 381 LFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALC 440

Query: 426 RINEPSKVIELLHKMKEINVMPD 448
           RI +    +E  ++M +  V PD
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPD 463



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 165/338 (48%), Gaps = 9/338 (2%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P   TY  ++     A     A   F +++  G++ +++  N ++   C+  + DEA 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA- 165

Query: 190 RLLDLMIQH----GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYS 243
             LD+++      G  PD F+Y+ LL   C  G+   A +L   M   G  C   V +Y+
Sbjct: 166 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYN 223

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +I+G+ K  ++  A  L+ EM+ +GI PD V ++++   L +   +++A     +M   
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           GV  + WTY   I G    G   EAV +F  +R      D+  +N L+  LCK G+++ A
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEA 343

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++F ++      P+V +Y+IM+ G    G +    DLF  M  + + P + TF++LI+ 
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 403

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +       K + + ++M++  V P+    + V+  L +
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCR 441



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 155/336 (46%), Gaps = 11/336 (3%)

Query: 2   GRVSHGFVV-----LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG ++     +  I+ +    D V F+S+I  LC   R+M+A  +F      G  P
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
               Y+ L++G C       AL +F+ M +         EPN V Y T+++G CK G +D
Sbjct: 533 TAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG------IEPNDVVYGTLVNGYCKIGRID 586

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +   L  +M  K IKP+ + Y  +I G   A     AK  F EM + G+  N  T+++++
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 646

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L KN   DEA  L   +    V+ D  T NT++ G   T RV  AK+LF S+   G  
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 706

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +YSI+I    K   +E A  ++S M + G +PD  + N +   L + +++ RA   
Sbjct: 707 PCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 766

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
             ++     + +  T    +D     G   E +   
Sbjct: 767 LSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 156/328 (47%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++        +++     PD   +  LI+G C    +++A  L +++   G   D+  
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVL 501

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +++++N LC+    + A N+F+   N      V   P  V Y+ ++DG C  G ++KA  
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPTAVVYSMLMDGYCLVGKMEKALR 555

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    I+PN V Y +++ G+C     +E   LF EM+ +G++P+ + +N+I+D L 
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 615

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+   A      M + G+  +  TY+ +L G       + A  LF  + +M  K  + 
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 675

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + + +I G  + + +E A  L++ +   G+ P VV ++ +   L +   VE A  +F  M
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM 735

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           Q  G   D+      +  L K   IV A
Sbjct: 736 QNAGCEPDSRLLNHVVRELLKKNEIVRA 763


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  272 bits (695), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 162/489 (33%), Positives = 256/489 (52%), Gaps = 31/489 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   + +    PD VT + L+  LC   +I EA  +F  + + G  PDVF+Y
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGVV--------------------- 94
             ++NG       +   +LF+ M  G+G       F V+                     
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 421

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +P+ VTY T+I  LC+ G +D A E   QM D+ + P+   Y  +I+GFC      
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 481

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +AK L  E+M+ G+  ++V F+ I++ LCK G++ +A  + DL +  G+ PDA  Y+ L+
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 541

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+CL G++  A  +F +M S G +  V  Y  L+NGYCK   I+  LSL+ EML +GIK
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 601

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P  ++++ +  GLF+  +   A   F EM  +G+A D  TY   + GL KN    EA+ L
Sbjct: 602 PSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 661

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  LR +  + +I   N++IDG+ ++ R+E A +LF S+    LVP+VVTYSIMI  L  
Sbjct: 662 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 721

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G +++A D+F  M+     PN    + ++R  ++ NE  +    L K+ E N   +   
Sbjct: 722 EGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 781

Query: 452 VSIVVDLLA 460
             ++VDL +
Sbjct: 782 TMLLVDLFS 790



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 158/514 (30%), Positives = 252/514 (49%), Gaps = 42/514 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R        G++L++    + +    L++G C   R  EA   L  +    GC PDVF+Y
Sbjct: 126 RPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSY 185

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+  LC    +  A +L   MA G    G VC PN V Y T+IDG  KEG V+KA +L
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPNVVAYNTVIDGFFKEGDVNKACDL 241

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK--------------------------------- 148
             +M  + I P++VTY SV+   C A+                                 
Sbjct: 242 FKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSS 301

Query: 149 --DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W EA R+F EM    + P+VVT +++M  LCK GK+ EA  + D M   G  PD F+
Sbjct: 302 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YN +L+G+   G +    +LF  M   G     +++++LI  Y     ++ A+ +++EM 
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 421

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G+KPDVV + T+   L  I +++ A + F++M   GVA D + Y   I G C +G ++
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 481

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A EL   +       DI  ++S+I+ LCK GR+  A  +F       L P+ V YS+++
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 541

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G C  G+M+KA  +F  M    + PNV+ +  L+ G+ +I    + + L  +M +  + 
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 601

Query: 447 PDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           P   + SI++D L +   ++ +   F  HE  E 
Sbjct: 602 PSTILYSIIIDGLFQAGRTVPAKVKF--HEMTES 633



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 194/383 (50%), Gaps = 5/383 (1%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR+   + A+ LF   A+   +   V  P + TY  ++D   +    + A     Q+   
Sbjct: 83  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 140

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDE 187
            ++ N++    ++ GFC AK  +EA  + +    + G  P+V ++++++  LC  GK  +
Sbjct: 141 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200

Query: 188 ASRLLDLMIQHGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           A  LL +M + G    P+   YNT++DGF   G VN A +LF  M   G    + +Y+ +
Sbjct: 201 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 260

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++  CK + ++ A +   +M++K + P+   +N L  G     Q + A ++F EM+R+ +
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D  T    +  LCK G I EA ++F T+ +     D+ +YN +++G    G L    +
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           LF  +    + P+  T++++I    N G +DKA  +F +M ++ V P+V+T+  +I    
Sbjct: 381 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440

Query: 426 RINEPSKVIELLHKMKEINVMPD 448
           RI +    +E  ++M +  V PD
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPD 463



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 11/336 (3%)

Query: 2   GRVSHGFVV-----LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG ++     +  I+ +    D V F+S+I  LC   R+M+A  +F      G  P
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D   Y+ L++G C       AL +F+ M +         EPN V Y T+++G CK G +D
Sbjct: 533 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG------IEPNVVVYCTLVNGYCKIGRID 586

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +   L  +M  + IKP+ + Y+ +I G   A     AK  F EM + G+  ++ T+N+++
Sbjct: 587 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L KN   DEA  L   +    V+ +  T NT++DG   T RV  AK+LF S+      
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 706

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
            +V +YSI+I    K   +E A  ++S M + G +P+  + N +   L + +++ RA   
Sbjct: 707 PSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAY 766

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
             ++     + +  T    +D     G   E +   
Sbjct: 767 LSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 158/328 (48%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++        +++     PD   +  LI+G C    +++A  L +++   G   D+  
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +++++N LC+    + A N+F+   N      V   P+ V Y+ ++DG C  G ++KA  
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYSMLMDGYCLVGKMEKALR 555

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    I+PNVV Y +++ G+C     +E   LF EM+ +G++P+ + +++I+D L 
Sbjct: 556 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 615

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+   A      M + G+  D  TYN +L G       + A  LF  + +M  K  + 
Sbjct: 616 QAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 675

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + + +I+G  + + +E A  L++ +    + P VV ++ +   L +   VE A  +F  M
Sbjct: 676 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 735

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           Q  G   ++      +  L K   IV A
Sbjct: 736 QNAGCEPNSRLLNHVVRELLKKNEIVRA 763



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 149/302 (49%), Gaps = 9/302 (2%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + P   T+ ++MD   +  + + A      +++ G+R +    N LL+GFC   R + A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 225 ELFV-SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--KPDVVIHNTLF 281
           ++ +     +GC   VFSYSIL+   C   +   A  L   M   G    P+VV +NT+ 
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL---RIL 338
            G F+   V +A  LF EM + G+  D  TY + +  LCK   + +A      +   R+L
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
              +    YN+LI G   +G+ + A+ +F+ +    ++P+VVT S+++G LC  G++ +A
Sbjct: 287 PNNW---TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           RD+F  M      P+V ++++++ G+        + +L   M    + PD    ++++  
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 403

Query: 459 LA 460
            A
Sbjct: 404 YA 405


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 139/393 (35%), Positives = 224/393 (56%), Gaps = 6/393 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T   ++  +C  S+   A+    K+   G EPD+ T+T+L+NG C  +    A+ L
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+++       G+  +PN VTYTT+I  LCK   ++ A EL  QM     +PNVVTY ++
Sbjct: 176 FDQI------LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C    W +A  L  +MM + ++PNV+TF  ++D   K GK+ EA  L ++MIQ  V
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD FTY +L++G C+ G ++ A+++F  ME  GC      Y+ LI+G+CK+K +E  + 
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ EM  KG+  + + +  L  G   + + + A ++F++M       D  TY   +DGLC
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            NG + +A+ +F  +R  + + +I  Y  +I G+CK G++E A +LF SL    + PNV+
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           TY+ MI G C  G + +A  LF  M+E+  +PN
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 149/439 (33%), Positives = 236/439 (53%), Gaps = 6/439 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R++ S   P  + FT L+  +   +R     +LF ++++ G  P + T   +++ +C +S
Sbjct: 73  RMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSS 132

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A     +M     + G   EP+ VT+T++++G C    ++ A  L  Q+     KP
Sbjct: 133 QPCRASCFLGKMM----KLGF--EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           NVVTYT++IR  C  +  N A  LF +M   G +PNVVT+N ++  LC+ G+  +A+ LL
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M++  + P+  T+  L+D F   G++  AKEL+  M  M     VF+Y  LING C  
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             ++ A  ++  M   G  P+ VI+ TL  G  +  +VE   K+F EM + GV A+T TY
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I G C  G    A E+F+ +   +   DIR YN L+DGLC +G++E AL +F  +  
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             +  N+VTY+I+I G+C  G+++ A DLF  +    + PNVIT+  +I GF R     +
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486

Query: 433 VIELLHKMKEINVMPDASI 451
              L  KMKE   +P+ S+
Sbjct: 487 ADSLFKKMKEDGFLPNESV 505



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/372 (34%), Positives = 204/372 (54%), Gaps = 6/372 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LG+++K  F PD VTFTSL+ G C  +RI +A ALF ++   G +P+V TYTTL+  LC+
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
             H   A+ LF +M   NG       PN VTY  ++ GLC+ G    A  LL  M  + I
Sbjct: 201 NRHLNHAVELFNQMGT-NGS-----RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +PNV+T+T++I  F       EAK L+  M+   V P+V T+  +++ LC  G +DEA +
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +  LM ++G  P+   Y TL+ GFC + RV    ++F  M   G      +Y++LI GYC
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
                + A  ++++M S+   PD+  +N L  GL    +VE+A  +F+ M++  +  +  
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY   I G+CK G + +A +LF +L     + ++  Y ++I G C+ G +  A  LF+ +
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494

Query: 371 PCGVLVPNVVTY 382
                +PN   Y
Sbjct: 495 KEDGFLPNESVY 506



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 174/334 (52%), Gaps = 6/334 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     +  +IL   F P+ VT+T+LI+ LC    +  A  LF ++   G  P+V TY 
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LV GLC       A  L  +M           EPN +T+T +ID   K G + +AKEL 
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRR------IEPNVITFTALIDAFVKVGKLMEAKELY 281

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M   ++ P+V TY S+I G C     +EA+++F  M   G  PN V +  ++   CK+
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++++  ++   M Q GV  +  TY  L+ G+CL GR + A+E+F  M S      + +Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++L++G C N ++E AL ++  M  + +  ++V +  +  G+ ++ +VE AF LF  +  
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            G+  +  TY T I G C+ G I EA  LF  ++
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 193/380 (50%), Gaps = 2/380 (0%)

Query: 101 TYTTII-DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           +Y  I+ +GL    F D A +L  +M      P+++ +T ++        ++    LF +
Sbjct: 50  SYRKILRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M   G+ P + T N++M  +C + +   AS  L  M++ G  PD  T+ +LL+G+C   R
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           +  A  LF  +  MG K  V +Y+ LI   CKN+ +  A+ L+++M + G +P+VV +N 
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  GL EI +   A  L  +M +  +  +  T+   ID   K G ++EA EL++ +  + 
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D+  Y SLI+GLC  G L+ A ++F  +      PN V Y+ +I G C   +++   
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +F +M +  VV N IT+ +LI+G+  +  P    E+ ++M      PD    ++++D L
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408

Query: 460 AKNEISLNSLPSFTVHEQQE 479
             N     +L  F    ++E
Sbjct: 409 CCNGKVEKALMIFEYMRKRE 428



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 192/385 (49%), Gaps = 6/385 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           AL+LF  M +          P+ + +T ++  + K    D    L  QM+   I P + T
Sbjct: 67  ALDLFTRMVHSRPL------PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
              V+   C +     A     +MM  G +P++VTF  +++  C   ++++A  L D ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G +P+  TY TL+   C    +NHA ELF  M + G +  V +Y+ L+ G C+     
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L  +M+ + I+P+V+    L     ++ ++  A +L++ M +  V  D +TY + I
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLC  G + EA ++F+ +    C  +   Y +LI G CKS R+E  +++F  +    +V
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            N +TY+++I G C  G+ D A+++F  M      P++ T+++L+ G     +  K + +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
              M++  +  +    +I++  + K
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCK 445



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 149/277 (53%), Gaps = 6/277 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      +L  ++K    P+ +TFT+LI       ++MEA  L+  +      PDVFT
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+NGLC       A  +F  M   NG     C PN V YTT+I G CK   V+   +
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMER-NG-----CYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  K +  N +TYT +I+G+C     + A+ +F +M  +   P++ T+NV++D LC
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            NGK+++A  + + M +  +  +  TY  ++ G C  G+V  A +LF S+ S G K  V 
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           +Y+ +I+G+C+   I  A SL+ +M   G  P+  ++
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 149/457 (32%), Positives = 239/457 (52%), Gaps = 7/457 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
              + +L  + K    P    + ++IKGLC   R+  A   +  ++   C P V TYT L
Sbjct: 184 QQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTIL 242

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V+ LC+++    A  + E+M          C PN VTY T+I+G CK G +D+A  L  Q
Sbjct: 243 VDALCKSARISDASLILEDMIEAG------CAPNVVTYNTLINGFCKLGNMDEAVVLFNQ 296

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M + +  P+V TY  +I G+C  +   +  +L  EM+  G +PN +T+N +MD L K+GK
Sbjct: 297 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK 356

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
             +A  L  +M++   +P  FT+N ++D FC  G+++ A ELF  M   GC   +++Y+I
Sbjct: 357 YIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNI 416

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+G C+   I+ A  L   M   G  PDVV +N++  GL +  QV+ A+++++ ++  G
Sbjct: 417 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 476

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D  T  T IDGLCK+  + +A +L   +       D+ AY  LI G CK+ +L+ +L
Sbjct: 477 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL 536

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
             F  +     VP V+TYSI+I  LC   ++     L   M E  V P+ I +  +I G 
Sbjct: 537 AFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGL 596

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            + +   +  EL   MK+    P     +++VD L K
Sbjct: 597 CKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCK 633



 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 143/444 (32%), Positives = 235/444 (52%), Gaps = 7/444 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD++T+++LI G C      +A  L  ++   G  P    Y T++ GLC       AL 
Sbjct: 164 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 223

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            + +M          C P+ +TYT ++D LCK   +  A  +L  M +    PNVVTY +
Sbjct: 224 HYRDMQRN-------CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNT 276

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I GFC   + +EA  LF +M++    P+V T+N+++D  CK  +  + ++LL  M+++G
Sbjct: 277 LINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG 336

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TYNTL+D    +G+   A  L   M    CK + F+++++I+ +CK  +++ A 
Sbjct: 337 CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAY 396

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  M  +G  PD+  +N +  G    ++++ A +L + M   G   D  TY + + GL
Sbjct: 397 ELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 456

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   + EA E++  LR      D+   ++LIDGLCKS RL+ A +L R +      P+V
Sbjct: 457 CKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 516

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           V Y+I+I G C   Q+DK+   F +M +   VP VIT+ ++I    +         LL  
Sbjct: 517 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 576

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           M E  V PDA + + V+D L K++
Sbjct: 577 MLERGVTPDAIVYTSVIDGLCKSD 600



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 236/462 (51%), Gaps = 6/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            R+S   ++L  ++++   P+ VT+ +LI G C    + EA  LF ++    C PDVFTY
Sbjct: 250 ARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTY 309

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C+         L +EM     ++G  CEPN +TY T++D L K G    A  L
Sbjct: 310 NILIDGYCKQERPQDGAKLLQEMV----KYG--CEPNFITYNTLMDSLVKSGKYIDAFNL 363

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  ++ KP+  T+  +I  FC     + A  LF  M D+G  P++ T+N+++   C+
Sbjct: 364 AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACR 423

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++D+A +LL+ M + G  PD  TYN+++ G C   +V+ A E++  + + G    V +
Sbjct: 424 ANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVT 483

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            S LI+G CK++ ++ A  L  EM   G  PDVV +  L  G  +  Q++++   F EM 
Sbjct: 484 CSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML 543

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G      TY   ID LCK+  + +   L  T+       D   Y S+IDGLCKS   +
Sbjct: 544 DKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYD 603

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL++ +      P VVTY++++  LC   ++D+A  L   ME +  +P+ +T++ + 
Sbjct: 604 EAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVF 663

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            GF +  E  K   L   MK     P   + S+++  L   E
Sbjct: 664 DGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEE 705



 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 234/451 (51%), Gaps = 6/451 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +    V+  ++L++  +PD  T+  LI G C + R  + A L  ++  +GCEP+  T
Sbjct: 284 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 343

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++ L ++   I A NL + M   +      C+P+  T+  +ID  CK G +D A E
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMMLRRD------CKPSHFTFNLMIDMFCKVGQLDLAYE 397

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M D+   P++ TY  +I G C A   ++A++L   M + G  P+VVT+N I+  LC
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++DEA  + +++   G   D  T +TL+DG C + R++ A++L   ME  G    V 
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILI+G+CK  +++ +L+ +SEML KG  P V+ ++ +   L +  +V     L   M
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 577

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  D   Y + IDGLCK+    EA EL+  ++   C   +  YN L+D LCK  RL
Sbjct: 578 LERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRL 637

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A+ L   +     +P+ VTY+ +  G     + DKA  LF  M+     P    + +L
Sbjct: 638 DEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLL 697

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +   +   +  + +E+  +  E     D  I
Sbjct: 698 LTKLVAEEKMDQAMEIWEEALEAGADVDPEI 728



 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 144/440 (32%), Positives = 227/440 (51%), Gaps = 11/440 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T   L+     + +  EA  LF   R   C PD  TY+TL+NG C+      A  L +EM
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD--KNIKPNVVTYTSVIR 142
                + G+V  P+   Y TII GLC  G VD A   L+  +D  +N  P+V+TYT ++ 
Sbjct: 194 E----KRGIV--PHNAVYNTIIKGLCDNGRVDSA---LVHYRDMQRNCAPSVITYTILVD 244

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
             C +   ++A  +  +M++ G  PNVVT+N +++  CK G MDEA  L + M+++   P
Sbjct: 245 ALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSP 304

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D FTYN L+DG+C   R     +L   M   GC+    +Y+ L++   K+ +   A +L 
Sbjct: 305 DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLA 364

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
             ML +  KP     N +     ++ Q++ A++LF  M   G   D +TY   I G C+ 
Sbjct: 365 QMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRA 424

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
             I +A +L   +    C  D+  YNS++ GLCK+ +++ A E++  L  G    +VVT 
Sbjct: 425 NRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTC 484

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           S +I GLC   ++D A  L  +ME N   P+V+ + +LI GF + ++  K +    +M +
Sbjct: 485 STLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLD 544

Query: 443 INVMPDASIVSIVVDLLAKN 462
              +P     SIV+D L K+
Sbjct: 545 KGCVPTVITYSIVIDKLCKS 564



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 238/461 (51%), Gaps = 7/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV    V    + ++C  P  +T+T L+  LC  +RI +A+ +   +   GC P+V TY
Sbjct: 216 GRVDSALVHYRDMQRNC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTY 274

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG C+  +   A+ LF +M   +      C P+  TY  +IDG CK+       +L
Sbjct: 275 NTLINGFCKLGNMDEAVVLFNQMLENS------CSPDVFTYNILIDGYCKQERPQDGAKL 328

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M     +PN +TY +++     +  + +A  L   M+ +  +P+  TFN+++D  CK
Sbjct: 329 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D A  L  LM   G  PD +TYN ++ G C   R++ A++L   M   GC   V +
Sbjct: 389 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 448

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +++G CK  +++ A  +Y  + + G   DVV  +TL  GL +  +++ A KL  EM+
Sbjct: 449 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 508

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           RNG A D   Y   I G CK   + +++  F  +    C   +  Y+ +ID LCKS R+ 
Sbjct: 509 RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVR 568

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
               L +++    + P+ + Y+ +I GLC     D+A +L+  M++    P V+T+++L+
Sbjct: 569 DGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLV 628

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               +++   + I LL  M+    +PD    + V D   K+
Sbjct: 629 DKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKS 669



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 141/259 (54%), Gaps = 6/259 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT ++LI GLC   R+ +A  L  ++   G  PDV  YT L++G C+      +L  F
Sbjct: 480 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF 539

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM +        C P  +TY+ +ID LCK   V     LL  M ++ + P+ + YTSVI
Sbjct: 540 SEMLDKG------CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVI 593

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +  ++EA  L+  M   G  P VVT+NV++D+LCK  ++DEA  LL++M   G  
Sbjct: 594 DGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCL 653

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TYN++ DGF  +   + A  LF +M+S GC  T F YS+L+      ++++ A+ +
Sbjct: 654 PDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEI 713

Query: 262 YSEMLSKGIKPDVVIHNTL 280
           + E L  G   D  I  TL
Sbjct: 714 WEEALEAGADVDPEISRTL 732



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 160/314 (50%), Gaps = 8/314 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     +L R+ ++   PD VT+ S++ GLC  S++ EA  ++  LR  G   DV T +
Sbjct: 426 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 485

Query: 63  TLVNGLCRTSHTIVALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TL++GLC++     A  L  EM  NG+        P+ V YT +I G CK   +DK+   
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNGSA-------PDVVAYTILIHGFCKADQLDKSLAF 538

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M DK   P V+TY+ VI   C +    +   L   M+++GV P+ + +  ++D LCK
Sbjct: 539 FSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCK 598

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +   DEA  L  LM Q G  P   TYN L+D  C   R++ A  L   MES GC     +
Sbjct: 599 SDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVT 658

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ + +G+ K+ E + A  L+  M S+G  P   +++ L   L    ++++A ++++E  
Sbjct: 659 YNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEAL 718

Query: 302 RNGVAADTWTYRTF 315
             G   D    RT 
Sbjct: 719 EAGADVDPEISRTL 732



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 133/278 (47%), Gaps = 2/278 (0%)

Query: 185 MDEASRLLDLMI-QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           +D+A +  D    Q G +   FT N LL  F    +   A +LF +     C     +YS
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LING+CK ++ + A  L  EM  +GI P   ++NT+  GL +  +V+ A   + +MQRN
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN 231

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
             A    TY   +D LCK+  I +A  +   +    C  ++  YN+LI+G CK G ++ A
Sbjct: 232 -CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           + LF  +      P+V TY+I+I G C   +      L  +M +    PN IT++ L+  
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++  +      L   M   +  P     ++++D+  K
Sbjct: 351 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 160/470 (34%), Positives = 250/470 (53%), Gaps = 30/470 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT  SL+  LC   +I +A  +F  + + G + D+F+Y  ++NG       +    L
Sbjct: 319 PDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTEL 378

Query: 81  FEEM-----ANGNGEFGVV------------------------CEPNTVTYTTIIDGLCK 111
           F  M     A  +  F V+                         EP+ VTY+T+I  LC+
Sbjct: 379 FNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCR 438

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G +D A E   QM D+ + P++ TY  +I+GFC   D  +AK L ++MM++G++P++  
Sbjct: 439 IGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGC 498

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           FN I++ LCK G++ +A  + D  I  G+ P+   YNTL+DG+CL G++ +A  +F  M 
Sbjct: 499 FNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMV 558

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           S G +  V  Y  L+NGYCK   I+  LSL+ E+L KGIKP   ++N +  GLF+  +  
Sbjct: 559 SAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTV 618

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A   F EM  +G+A D +TY   + GL KN    EA+ LF  L  +  + DI   N +I
Sbjct: 619 PAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMI 678

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV- 410
            G+ +  R+E A +LF S+    LVP+VVTYSIM+  L  +G +++A D+F  ME     
Sbjct: 679 AGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCE 738

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            PN    + ++R  +   E  +    L K+ E +   D S  ++++DL +
Sbjct: 739 QPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFS 788



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 241/482 (50%), Gaps = 40/482 (8%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTYTTLVNGLC 69
            G++LK+    D +  ++L++GLC   R  EA   L  ++   GC PDVF+Y  ++  LC
Sbjct: 131 FGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLC 190

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
               +  A  L   MA G    G VC PN V Y T+IDG  KEG V+KA +L  +M  + 
Sbjct: 191 SDRKSGQADELLRMMAEG----GAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRG 246

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I P++ TY  V+   C A+  ++A+ +  +M+D+GV P+  T+N ++      G+  EA 
Sbjct: 247 ISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAV 306

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           R+   M   G+ PD  T N+L+   C  G++  A+++F SM   G K  +FSY I++NGY
Sbjct: 307 RVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGY 366

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
                +     L++ MLS GI PD  I N L     +   ++RA  +F+EM+  GV  D 
Sbjct: 367 ATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDV 426

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTL-----------------------RILKCE----- 341
            TY T I  LC+ G + +AVE F+ +                        +LK +     
Sbjct: 427 VTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQ 486

Query: 342 -------FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                   DI  +N +I+ LCK GR+  A  +F       L PNV+ Y+ ++ G C  G+
Sbjct: 487 MMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGK 546

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           M+ A  +F  M    + PNV+ +  L+ G+ ++    + + L  ++    + P  ++ +I
Sbjct: 547 MENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNI 606

Query: 455 VV 456
           ++
Sbjct: 607 IL 608



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 227/453 (50%), Gaps = 6/453 (1%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
            +L +++     PD  T+ SLI G  +  +  EA  +  K+   G  PDV T  +L+  L
Sbjct: 272 AILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASL 331

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C+      A ++F+ MA   G+     + +  +Y  +++G   +G +    EL   M   
Sbjct: 332 CKHGKIKDARDVFDSMAM-KGQ-----KTDIFSYKIMLNGYATKGCLVDLTELFNLMLSD 385

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            I P+   +  +I+ +      + A  +F EM +QGV+P+VVT++ ++  LC+ GKMD+A
Sbjct: 386 GIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDA 445

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
               + MI  GV P   TY+ L+ GFC  G +  AK+L + M + G +  +  ++ +IN 
Sbjct: 446 VEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINN 505

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK   +  A +++   +S G+ P+V+++NTL  G   + ++E A ++FD M   G+  +
Sbjct: 506 LCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
              Y T ++G CK G I E + LF  +     +     YN ++ GL ++GR   A   F 
Sbjct: 566 VVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFH 625

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    +  +  TYSI++GGL  +   D+A  LF ++    V  ++ T +++I G  +I 
Sbjct: 626 EMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIR 685

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              +  +L   +    ++P     SI++  L K
Sbjct: 686 RVEEAKDLFASISRSGLVPSVVTYSIMMTNLIK 718



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 165/340 (48%), Gaps = 6/340 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    ++   + +    PD VT++++I  LC   ++ +A   F ++   G  P + TY
Sbjct: 405 GMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTY 464

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G C     + A +L  +M N          P+   +  II+ LCK G V  A+ +
Sbjct: 465 HFLIQGFCTHGDLLKAKDLVLQMMNKG------MRPDIGCFNFIINNLCKLGRVMDAQNI 518

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
                   + PNV+ Y +++ G+C       A R+F  M+  G+QPNVV +  +++  CK
Sbjct: 519 FDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCK 578

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DE   L   ++  G++P    YN +L G    GR   AK  F  M   G     ++
Sbjct: 579 VGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYT 638

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSI++ G  KN   + A+ L+ E+ +  +K D+   N +  G+F+I +VE A  LF  + 
Sbjct: 639 YSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASIS 698

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
           R+G+     TY   +  L K G + EA ++F ++    CE
Sbjct: 699 RSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCE 738



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 146/304 (48%), Gaps = 6/304 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++        +++     P   T+  LI+G C    +++A  L  ++   G  PD+  
Sbjct: 439 IGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGC 498

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  ++N LC+    + A N+F+          +   PN + Y T++DG C  G ++ A  
Sbjct: 499 FNFIINNLCKLGRVMDAQNIFDF------TISIGLHPNVMVYNTLMDGYCLVGKMENALR 552

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    I+PNVV Y +++ G+C     +E   LF E++ +G++P+   +N+I+  L 
Sbjct: 553 VFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLF 612

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+   A      M + G+  D +TY+ +L G       + A  LF  + +M  K  + 
Sbjct: 613 QAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDIT 672

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +I+I G  + + +E A  L++ +   G+ P VV ++ +   L +   VE A  +F  M
Sbjct: 673 TLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSM 732

Query: 301 QRNG 304
           +  G
Sbjct: 733 ENAG 736



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 3/117 (2%)

Query: 348 NSLIDGLCKSGRLEIALE-LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           ++L+ GLC++ R   AL+ L   +P    VP+V +Y I++  LC+D +  +A +L   M 
Sbjct: 147 SNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMA 206

Query: 407 ENAVV--PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           E   V  PN + ++ +I GF +  + +K  +L ++M +  + PD S  + VV+ L K
Sbjct: 207 EGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCK 263


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 132/361 (36%), Positives = 216/361 (59%), Gaps = 6/361 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    ++ ++++  + PD VTFT+LI GL   ++  EA AL  ++   GC+PD+ TY 
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VNGLC+   T +ALNL  +M           E N V Y+T+ID LCK    D A  L 
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAK------IEANVVIYSTVIDSLCKYRHEDDALNLF 276

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M++K ++PNV+TY+S+I   C    W++A RL  +M+++ + PN+VTF+ ++D   K 
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+ +A +L + MI+  + P+ FTY++L++GFC+  R+  AK++   M    C   V +Y
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LING+CK K ++  + L+ EM  +G+  + V + TL  G F+    + A  +F +M  
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV  +  TY   +DGLCKNG + +A+ +F  L+    E DI  YN +I+G+CK+G+ ++
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKM 516

Query: 363 A 363
            
Sbjct: 517 G 517



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 231/452 (51%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G + +S   P  + F+ L+  +   ++     +   K+ + G   +++TY  L+N  C
Sbjct: 65  LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R S   +AL L  +M     + G   EP+ VT  ++++G C    +  A  L+ QM +  
Sbjct: 125 RCSRLSLALALLGKMM----KLGY--EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            KP+ VT+T++I G       +EA  L   M+ +G QP++VT+  +++ LCK G  D A 
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL+ M    +  +   Y+T++D  C     + A  LF  ME+ G +  V +YS LI+  
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C       A  L S+M+ + I P++V  + L     +  ++ +A KL++EM +  +  + 
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +TY + I+G C    + EA ++   +    C  ++  YN+LI+G CK+ R++  +ELFR 
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    LV N VTY+ +I G       D A+ +F  M    V PN++T+++L+ G  +  +
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +K + +   ++   + PD    +I+++ + K
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 212/407 (52%), Gaps = 6/407 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P +  ++ L++ + + +   + ++  E+M       G+    N  TY  +I+  C+   +
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKME----ILGI--SHNLYTYNILINCFCRCSRL 129

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A  LL +M     +P++VT  S++ GFC+    ++A  L  +M++ G +P+ VTF  +
Sbjct: 130 SLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTL 189

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  L  + K  EA  L+D M+Q G +PD  TY  +++G C  G  + A  L   ME+   
Sbjct: 190 IHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V  YS +I+  CK +  + AL+L++EM +KG++P+V+ +++L   L    +   A +
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M    +  +  T+   ID   K G +V+A +L+  +     + +I  Y+SLI+G C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
              RL  A ++   +     +PNVVTY+ +I G C   ++DK  +LF +M +  +V N +
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T+  LI GF +  +      +  +M  + V P+    +I++D L KN
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 132/228 (57%), Gaps = 6/228 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  +++    P+ VTF++LI     + ++++A  L+ ++     +P++FTY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L+NG C       A  + E M   +      C PN VTY T+I+G CK   VDK  EL
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKD------CLPNVVTYNTLINGFCKAKRVDKGMEL 415

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  N VTYT++I GF  A+D + A+ +F +M+  GV PN++T+N+++D LCK
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           NGK+ +A  + + + +  + PD +TYN +++G C  G+       FV+
Sbjct: 476 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 162/321 (50%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y  V+R      + ++A  LF  M      P+++ F+ ++  + K  K D      + M 
Sbjct: 46  YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+  + +TYN L++ FC   R++ A  L   M  +G +  + + + L+NG+C    I 
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A++L  +M+  G KPD V   TL  GLF  ++   A  L D M + G   D  TY   +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLCK G    A+ L + +   K E ++  Y+++ID LCK    + AL LF  +    + 
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PNV+TYS +I  LCN G+   A  L  DM E  + PN++TF  LI  F++  +  K  +L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345

Query: 437 LHKMKEINVMPDASIVSIVVD 457
             +M + ++ P+    S +++
Sbjct: 346 YEEMIKRSIDPNIFTYSSLIN 366



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 134/278 (48%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++D+A  L  +M Q    P    ++ LL       + +        ME +G  H +++Y+
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           ILIN +C+   +  AL+L  +M+  G +PD+V  N+L  G    +++  A  L D+M   
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   DT T+ T I GL  +    EAV L   +    C+ D+  Y ++++GLCK G  ++A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L L   +    +  NVV YS +I  LC     D A +LF +ME   V PNVIT+  LI  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                  S    LL  M E  + P+    S ++D   K
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 112/241 (46%)

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           T + Y  ++     + E++ A+ L+  M      P ++  + L   + ++++ +      
Sbjct: 42  TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           ++M+  G++ + +TY   I+  C+   +  A+ L   +  L  E DI   NSL++G C  
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
            R+  A+ L   +      P+ VT++ +I GL    +  +A  L   M +    P+++T+
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
             ++ G  +  +    + LL+KM+   +  +  I S V+D L K     ++L  FT  E 
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281

Query: 478 Q 478
           +
Sbjct: 282 K 282


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  270 bits (691), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 158/476 (33%), Positives = 252/476 (52%), Gaps = 18/476 (3%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTT 63
           ++  V L R  + C +P+ VTF++LI+GLC   R+ +A  ++ ++  V G  P+ FTY  
Sbjct: 364 AYRHVELMRRTEGC-SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAF 422

Query: 64  LVNGLCRTSHTIVALNLFEEM----ANGNGEFGV-----------VCEPNTVTYTTIIDG 108
           L+ GLC+   +      FE+M       +  + +           VC P  VTY T++ G
Sbjct: 423 LLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTG 482

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           L K G V  A  LL  M +  + P+V+T+ SV+ G C  +   +A  +F   +++G +PN
Sbjct: 483 LSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPN 542

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           VVT++ ++D L K  KMDEA +LL  M++ G R +  TY+T++DG    GR+  A  +  
Sbjct: 543 VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 602

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   GC     +Y+ LI+G+ K + +  A+ L  EML  G  P VV + TL  GL    
Sbjct: 603 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG 662

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAY 347
           + + A ++ D M   G A +  TY + +DGLCK G + EA+  F  + R       + AY
Sbjct: 663 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 722

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           ++LIDGLCK+GR++ A E    +     +P+VVT+SI+I GLC+ G++D   +LF  M E
Sbjct: 723 SALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAE 782

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
                ++  ++ +I  +    E S    LL +MK   +  +     IV+  L  N+
Sbjct: 783 RGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGND 838



 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 160/498 (32%), Positives = 247/498 (49%), Gaps = 44/498 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L  +++S  +PD +TF S++ GLC E RI++A  +F +    GC P+V TY
Sbjct: 487 GMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 546

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL++GL + +    AL L  +M     E G  C  NTVTY+T++DGL K G ++ A  +
Sbjct: 547 STLIDGLSKMAKMDEALQLLAKMV----ELG--CRANTVTYSTVVDGLLKVGRMEDAVVV 600

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM+D    P+ VTY ++I GF   +   EA  L  EM++ G  P+VVT+  +   LC+
Sbjct: 601 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 660

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNT-------------------------------- 209
           +G+ DEA  +LD M   G  P+A TY++                                
Sbjct: 661 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 720

Query: 210 ----LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
               L+DG C  GR++ A E    M   G    V ++SILING C    I+  L L+  M
Sbjct: 721 AYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGM 780

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             +G K D+  +N +        +   A+ L +EM+ +G+A +T T+   I  LC N  I
Sbjct: 781 AERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRI 840

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EAV  FH++    C  +I +YN+LI  L  S R E ALEL R++      P+   Y  +
Sbjct: 841 DEAVSYFHSIP-EDCRDEI-SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTV 898

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + GL   G  + A  L  +M      P++ T+ ++I G  +  +     +   +M   N+
Sbjct: 899 MDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNL 958

Query: 446 MPDASIVSIVVDLLAKNE 463
            PDA + S ++D   K +
Sbjct: 959 KPDAIVYSSLIDAFCKAD 976



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 238/464 (51%), Gaps = 12/464 (2%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            M ++     +L ++++     + VT+++++ GL    R+ +A  +  ++R  GC PD  T
Sbjct: 556  MAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVT 615

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y TL++G  +      A+ L  EM     E G    P+ VTYTT+  GLC+ G  D+A E
Sbjct: 616  YNTLIDGFFKRQRLREAVGLLREML----EAGF--HPSVVTYTTLCHGLCRSGRFDEAVE 669

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDEL 179
            +L  M  +   PN +TY+S++ G C A    EA   F +M  D+ V P+V+ ++ ++D L
Sbjct: 670  ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 729

Query: 180  CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            CK G++DEA   L+ MI+ G  PD  T++ L++G C  GR++   ELF  M   GCK  +
Sbjct: 730  CKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADI 789

Query: 240  FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            ++Y+ +IN YC   E   A +L  EM + GI  + V H  +   L    +++ A   F  
Sbjct: 790  YAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHS 849

Query: 300  MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            +  +    D  +Y T I  L  +    +A+EL   +       D   Y +++DGL K+G 
Sbjct: 850  IPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGS 907

Query: 360  LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
             E+A +L + +      P++ TY+IMI GL    Q+  A D F +M    + P+ I +  
Sbjct: 908  PEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSS 967

Query: 420  LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            LI  F + ++     +LL   +   + P  ++ S +VD L KN 
Sbjct: 968  LIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCKNR 1008



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/487 (31%), Positives = 242/487 (49%), Gaps = 37/487 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV   +    ++L   FTPDAVT+ +++ GL    R+  A  +   L      P VFT
Sbjct: 154 LGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFT 213

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T  V+GL +  +   A   F+ M     + GV   PNTVTY  +IDGLCK G +D A  
Sbjct: 214 FTIAVDGLSKAGNLTGAYEFFDSMP----QTGV--SPNTVTYDALIDGLCKAGKLDIALG 267

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL   +DKN +  +  ++S++ G C A    EA +L   M      PNVV FN +M+ LC
Sbjct: 268 LL---RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLC 321

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA-KELFVSMESMGCKHTV 239
           +  ++DEA  L D+M + G   D  TYN LL G C   R+  A + + +   + GC   V
Sbjct: 322 QARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNV 381

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            ++S LI G C    +  A  +Y  M++ +GI P+   +  L  GL +     R  + F+
Sbjct: 382 VTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFE 441

Query: 299 EM-QRNGVAADTW--------------------TYRTFIDGLCKNGYIVEAVELFHTLRI 337
           +M +R   ++ +W                    TY T + GL K+G + +A+ L   +  
Sbjct: 442 QMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIE 501

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                D+  +NS++DGLCK  R+  A  +F R+L  G   PNVVTYS +I GL    +MD
Sbjct: 502 SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR-PNVVTYSTLIDGLSKMAKMD 560

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A  L   M E     N +T+  ++ G +++      + +L +M++   +PDA   + ++
Sbjct: 561 EALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 620

Query: 457 DLLAKNE 463
           D   K +
Sbjct: 621 DGFFKRQ 627



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 227/475 (47%), Gaps = 46/475 (9%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +GR+    VVL ++  +   PDAVT+ +LI G     R+ EA  L  ++   G  P V T
Sbjct: 591  VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 650

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            YTTL +GLCR+     A+ + + MA         C PN +TY++I+DGLCK G V +A  
Sbjct: 651  YTTLCHGLCRSGRFDEAVEILDYMAARG------CAPNAITYSSIVDGLCKAGRVTEALG 704

Query: 121  LLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
               +M +D+ + P+V+ Y+++I G C A   +EA      M+  G  P+VVTF+++++ L
Sbjct: 705  YFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764

Query: 180  CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            C  G++D    L   M + G + D + YN +++ +CL G  + A  L   M++ G     
Sbjct: 765  CDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNT 824

Query: 240  FSYSILINGYCKNKEI---------------------------------EGALSLYSEML 266
             ++ I+I   C N  I                                 E AL L   M+
Sbjct: 825  VTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMV 884

Query: 267  SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            + G  PD   + T+  GLF+    E A KL  EM+  G + D  TY   I GL K   + 
Sbjct: 885  ADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLP 944

Query: 327  EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
             A + F  +     + D   Y+SLID  CK+ +++ A +L RS     + P +  YS M+
Sbjct: 945  LACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMV 1001

Query: 387  GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIELLH 438
              LC +   DKA ++  +M+     P +  +  L   ++   R++E  K++  L 
Sbjct: 1002 DSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 243/521 (46%), Gaps = 62/521 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F    + ++  F P  VT++++I GLC ++ + +   L  ++   GC P+  TY
Sbjct: 15  GRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTY 74

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLVN L        A +L E MA  NG     C P  +T+  II GLCKEG ++ A  +
Sbjct: 75  NTLVNALLGQGRAKEAFSLLERMA-ANG-----CPPELITFGLIIKGLCKEGEIEAAFRV 128

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M D+   P+V  +T ++   C     +EA   F +++  G  P+ VT+N ++D L K
Sbjct: 129 VDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYK 188

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++ A  +L L+ +    P  FT+   +DG    G +  A E F SM   G      +
Sbjct: 189 AGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVT 248

Query: 242 YSILINGYCKNKEIEGALSL---------------------YSEMLSKGIK--------P 272
           Y  LI+G CK  +++ AL L                      +  L + I+        P
Sbjct: 249 YDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVP 308

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA---V 329
           +VV  N+L  GL +  +V+ AF+LFD M+ +G +AD  TY   + GLCK   I EA   V
Sbjct: 309 NVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHV 368

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGG 388
           EL    R   C  ++  +++LI GLC +GR+  A E++ R +    + PN  TY+ ++ G
Sbjct: 369 ELMR--RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEG 426

Query: 389 LCNDGQMDKARDLFLDMEE---------------------NAVVPNVITFDMLIRGFIRI 427
           LC  G   +    F  M E                         P ++T++ L+ G  + 
Sbjct: 427 LCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKS 486

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
                 + LL  M E  + PD    + V+D L K +  L++
Sbjct: 487 GMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDA 527



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 229/440 (52%), Gaps = 14/440 (3%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+  LI GLC   R+ +A   F K   FG  P V TY+T+++GLCR +       L EE
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           MA G G     C PN VTY T+++ L  +G   +A  LL +M      P ++T+  +I+G
Sbjct: 62  MA-GRG-----CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKG 115

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C   +   A R+  EM+D+G  P+V    V++  LC+ G++DEA      ++  G  PD
Sbjct: 116 LCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPD 175

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
           A TYNT++DG    GR+  A  +   +       TVF+++I ++G  K   + GA   + 
Sbjct: 176 AVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFD 235

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            M   G+ P+ V ++ L  GL +  +++ A  L  +       A  + + + + GLC+  
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQ---AGMFAFSSLLHGLCQAH 292

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + EA++L   L+ + C  ++  +NSL++GLC++ R++ A ELF  +       +V+TY+
Sbjct: 293 RLEEAIQL---LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYN 349

Query: 384 IMIGGLCNDGQMDKA-RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           I++ GLC   ++ +A R + L        PNV+TF  LI+G       ++  E+  +M  
Sbjct: 350 ILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVA 409

Query: 443 I-NVMPDASIVSIVVDLLAK 461
           +  + P+    + +++ L K
Sbjct: 410 VEGISPNRFTYAFLLEGLCK 429



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 170/371 (45%), Gaps = 33/371 (8%)

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           +VTY  +I G C A    +A   F + +  G +P VVT++ ++D LC++ ++D+  +LL+
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G  P+A TYNTL++     GR   A  L   M + GC   + ++ ++I G CK  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           EIE A  +  EM+ +G  PDV IH  L   L E+ +V+ A+  F ++   G   D  TY 
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T +DGL K G +  A  +   L        +  +   +DGL K+G L  A E F S+P  
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA------------------------ 409
            + PN VTY  +I GLC  G++D A  L  D    A                        
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQL 300

Query: 410 -----VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
                 VPNV+ F+ L+ G  +     +  EL   MKE     D     I  ++L K   
Sbjct: 301 LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADV----ITYNILLKGLC 356

Query: 465 SLNSLPSFTVH 475
            L  +P    H
Sbjct: 357 KLRRIPEAYRH 367


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  270 bits (691), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 163/489 (33%), Positives = 253/489 (51%), Gaps = 31/489 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   + +    PD V   +L+  LC   +I EA  +F  + + G  PDVF+Y
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGVV--------------------- 94
           T ++NG       +   +LF+ M  G+G       F V+                     
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLML-GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 423

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +P+ VTY T+I  LC+ G +D A E   QM D+ + P+   Y  +I+GFC      
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +AK L  E+M+ G++ ++V F  I++ LCK G++ +A  + DL +  G+ PDA  YN L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+CL G++  A  +F +M S G +  V  Y  L+NGYCK   I+  LSL+ EML KGIK
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P  +++N +  GLFE  +   A   F EM  +G+A +  TY   + GL KN    EA+ L
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  LR +  + DI   N++I G+ ++ R+E A +LF S+    LVP  VTYSIMI  L  
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLK 723

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G +++A D+F  M+     P+    + ++R  ++ NE  +    L K+ E N   +   
Sbjct: 724 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 783

Query: 452 VSIVVDLLA 460
             ++VDL +
Sbjct: 784 AMLLVDLFS 792



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 250/534 (46%), Gaps = 79/534 (14%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R        G++L++    DA+  + L+KG C   R  EA   L  +    GC PDVF+Y
Sbjct: 128 RPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 187

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+  LC    +  A +L   MA G    G VC P+ V Y T+IDG  KEG V+KA +L
Sbjct: 188 NILLKSLCNQGKSGQADDLLRMMAEG----GTVCSPDVVAYNTVIDGFFKEGDVNKACDL 243

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK--------------------------------- 148
             +M  + I P++VTY+SV+   C A+                                 
Sbjct: 244 FKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303

Query: 149 --DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W EA R+F EM  Q + P+VV  N +M  LCK GK+ EA  + D M   G  PD F+
Sbjct: 304 TGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 363

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  +L+G+   G +    +LF  M   G    ++++++LI  Y     ++ A+ +++EM 
Sbjct: 364 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 423

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G+KP VV + T+   L  I +++ A + F++M   GV  D + Y   I G C +G ++
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 327 EAVELFHTL-----------------------RILKCE--FDIRA----------YNSLI 351
           +A EL   +                       R++  +  FD+            YN L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG C  G++E AL +F ++    + PNVV Y  ++ G C  G++D+   LF +M +  + 
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 412 PNVITFDMLIRGFIRINE--PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           P+ I ++++I G        P+KV    H+M E  +  +    SIV+  L KN 
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKV--KFHEMTESGIAMNKCTYSIVLRGLFKNR 655



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 194/380 (51%), Gaps = 4/380 (1%)

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
           S   +A+ LF   A+   +   V  P + TY  ++D   +    + A     Q+    ++
Sbjct: 87  SGPALAVALFNRAAS-RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLR 145

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASR 190
            + +  + +++GFC AK  +EA  + +    + G  P+V ++N+++  LC  GK  +A  
Sbjct: 146 VDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADD 205

Query: 191 LLDLMIQHGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           LL +M + G    PD   YNT++DGF   G VN A +LF  M   G    + +YS +++ 
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK + ++ A +   +M++KG+ PD   +N L  G     Q + A ++F EM+R  +  D
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
                T +  LCK G I EA ++F T+ +     D+ +Y  +++G    G L    +LF 
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    + P++ T++++I    N G +DKA  +F +M ++ V P+V+T+  +I    RI 
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 429 EPSKVIELLHKMKEINVMPD 448
           +    +E  ++M +  V+PD
Sbjct: 446 KMDDAMEKFNQMIDQGVVPD 465



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 165/338 (48%), Gaps = 9/338 (2%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P   TY  ++     A     A   F +++  G++ + +  + ++   C+  + DEA 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA- 167

Query: 190 RLLDLMIQH----GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYS 243
             LD+++      G  PD F+YN LL   C  G+   A +L   M   G  C   V +Y+
Sbjct: 168 --LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +I+G+ K  ++  A  L+ EM+ +GI PD+V ++++   L +   +++A     +M   
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           GV  D WTY   I G    G   EAV +F  +R      D+ A N+L+  LCK G+++ A
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++F ++      P+V +Y+IM+ G    G +    DLF  M  + + P++ TF++LI+ 
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 405

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +       K + + ++M++  V P       V+  L +
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 153/336 (45%), Gaps = 11/336 (3%)

Query: 2   GRVSHGFVV-----LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG ++     +  I+ +    D V F S+I  LC   R+M+A  +F      G  P
Sbjct: 475 GFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP 534

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D   Y  L++G C       AL +F+ M +         EPN V Y T+++G CK G +D
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG------IEPNVVGYGTLVNGYCKIGRID 588

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +   L  +M  K IKP+ + Y  +I G   A     AK  F EM + G+  N  T+++++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L KN   DEA  L   +    V+ D  T NT++ G   T RV  AK+LF S+   G  
Sbjct: 649 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 708

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +YSI+I    K   +E A  ++S M + G +PD  + N +   L + +++ RA   
Sbjct: 709 PCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 768

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
             ++     + +  T    +D     G   E +   
Sbjct: 769 LSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 155/328 (47%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++        +++     PD   +  LI+G C    +++A  L +++   G   D+  
Sbjct: 444 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 503

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +++N LC+    + A N+F+   N      V   P+ V Y  ++DG C  G ++KA  
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    I+PNVV Y +++ G+C     +E   LF EM+ +G++P+ + +N+I+D L 
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+   A      M + G+  +  TY+ +L G       + A  LF  + +M  K  + 
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + + +I G  + + +E A  L++ +   G+ P  V ++ +   L +   VE A  +F  M
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSM 737

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           Q  G   D+      +  L K   IV A
Sbjct: 738 QNAGCEPDSRLLNHVVRELLKKNEIVRA 765


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 245/459 (53%), Gaps = 9/459 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G   L R++     PD +  TSLI+G C   +  +A  +   L   G  PDV TY
Sbjct: 121 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITY 180

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G C++     AL + E M+           P+ VTY TI+  LC  G + +A E+
Sbjct: 181 NVLIGGYCKSGEIDKALQVLERMS---------VAPDVVTYNTILRSLCDSGKLKEAMEV 231

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +   +   P+V+TYT +I   C      +A +L  EM  +G +P+VVT+NV+++ +CK
Sbjct: 232 LDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA + L+ M  +G +P+  T+N +L   C TGR   A+ L   M   GC  +V +
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVT 351

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILIN  C+ + +  A+ +  +M   G  P+ + +N L  G  +  +++RA +  + M 
Sbjct: 352 FNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 411

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY T +  LCK+G    AVE+ + L    C   +  YN++IDGL K G+ E
Sbjct: 412 SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 471

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL   +    L P+++TYS ++ GL  +G++D+A  +F DME  ++ P+ +T++ ++
Sbjct: 472 YAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 531

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            G  +  + S+ I+ L  M E    P  +  +I+++ +A
Sbjct: 532 LGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 182/353 (51%), Gaps = 3/353 (0%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           L + G +++  + L +M  +   P+V+  TS+IRGFC +    +A R+   + + G  P+
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           V+T+NV++   CK+G++D+A ++L+ M    V PD  TYNT+L   C +G++  A E+  
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
                 C   V +Y+ILI   C +  +  A+ L  EM  KG KPDVV +N L  G+ +  
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           +++ A K  + M   G   +  T+   +  +C  G  ++A  L   +    C   +  +N
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            LI+ LC+   L  A+++   +P    +PN ++Y+ ++ G C + +MD+A +    M   
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              P+++T++ L+    +  +    +E+L+++      P     + V+D L K
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTK 466



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 153/277 (55%), Gaps = 3/277 (1%)

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N+ + +L +NG+++E  + L+ MI  G  PD     +L+ GFC +G+   A  +   +E+
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G    V +Y++LI GYCK+ EI+ AL +   M    + PDVV +NT+   L +  +++ 
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A ++ D   +     D  TY   I+  C +  + +A++L   +R   C+ D+  YN LI+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G+CK GRL+ A++   ++P     PNV+T++I++  +C+ G+   A  L  DM      P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           +V+TF++LI    R     + I++L KM +   MP++
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 111/217 (51%), Gaps = 3/217 (1%)

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           F+ +I +    +N E+E  L     M+ +G  PDV+   +L  G     +  +A ++ + 
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           ++ +G   D  TY   I G CK+G I +A+++   + +     D+  YN+++  LC SG+
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAP---DVVTYNTILRSLCDSGK 224

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A+E+          P+V+TY+I+I   CND  + +A  L  +M +    P+V+T+++
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           LI G  +     + I+ L+ M      P+    +I++
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIIL 321



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 22/134 (16%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+  +   +L  + +    PD +T+++L++GL  E ++ EA  +F  +     +P   T
Sbjct: 467 VGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVT 526

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL----------- 109
           Y  ++ GLC+   T  A++    M     E G  C+P   TYT +I+G+           
Sbjct: 527 YNAIMLGLCKAQQTSRAIDFLAYMV----EKG--CKPTKATYTILIEGIADEGLAEEALE 580

Query: 110 -----CKEGFVDKA 118
                C  GFV K+
Sbjct: 581 LLNELCSRGFVKKS 594



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           F+  A N  +  L ++G LE  L+    +     +P+V+  + +I G C  G+  KA  +
Sbjct: 105 FEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRI 164

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
              +E +  VP+VIT+++LI G+ +  E  K +++L +M   +V PD
Sbjct: 165 MEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPD 208


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 151/465 (32%), Positives = 249/465 (53%), Gaps = 2/465 (0%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G VS  F + G+ILK  +  D V   +++KGLC    +++A     ++   G   +  +
Sbjct: 85  LGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVS 144

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEF--GVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           Y  L+NGLC       A+NL   +     +   G   + N V Y+ +ID LC+ GFVD+ 
Sbjct: 145 YGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEG 204

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            E   +M    + PN  TY S+IRG C    + E   L  EM+ +G+  +V  F V++D 
Sbjct: 205 FEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDG 264

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCKNG + EA  + D M+  G  P+  T   L+ G+CL G V+ A+ELF ++   G K  
Sbjct: 265 LCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRD 324

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V++Y++ I+GYCK   +  A+ ++ EM  +G+ P++V +N+L   L +  +V  A+++  
Sbjct: 325 VWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVK 384

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M R+G+  D  T    +DGLCK+  + +A+ LF+ L       D+ +Y  LI G C S 
Sbjct: 385 TMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSR 444

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R+  A+ L R +    LVP++VTYS +I GLC  G++  A  L  +M     +P+ IT+ 
Sbjct: 445 RMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYS 504

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +L+    +     + + L ++M +  + PD    +I++D   K+E
Sbjct: 505 ILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSE 549



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 232/450 (51%), Gaps = 8/450 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + V ++ +I  LC    + E    + ++   G  P+ FTY +L+ GLC     +    L 
Sbjct: 184 NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLV 243

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM     +  V        +T +IDGLCK G + +A+E+  +M ++  +PN+VT T+++
Sbjct: 244 DEMIRRGLDVSVY------VFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALM 297

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C   + + A+ LF  + + G + +V T+NV +   CK G++ +A R+ D M + GV 
Sbjct: 298 GGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVV 357

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TYN+L+D  C  G V+ A E+  +M   G    + +  IL++G CK+K ++ A+ L
Sbjct: 358 PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILL 417

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +++++  G+ PDV  +  L  G     ++  A  L  +M    +     TY   IDGLC+
Sbjct: 418 FNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCR 477

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           +G I  A  L + + +     D   Y+ L+D L K   L+ A+ LF  +    L P+V+ 
Sbjct: 478 SGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMC 537

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+IMI G C   ++D+A +LF +M    +VP+++T+ +L     +    S   + ++ ++
Sbjct: 538 YTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIR 597

Query: 442 EINVMPDASIVSIVVDLLAKNEISLNSLPS 471
           +IN  P   ++  +  L     +    L S
Sbjct: 598 DIN--PPPRVLKYLAALCKSEHLDYKCLAS 625



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 12/189 (6%)

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            F +  V  +F +F ++ + G   DT    T + GLC NG +++A+E FH   I+   F 
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALE-FHD-EIVNNGFS 139

Query: 344 IR--AYNSLIDGLCKSGRLEIALELFRSLPC-------GVLVP-NVVTYSIMIGGLCNDG 393
           +   +Y  LI+GLC++GR+  A+ L R +         G  V  NVV YSI+I  LC +G
Sbjct: 140 LNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNG 199

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            +D+  + + +M  N V PN  T+  LIRG   + +  +   L+ +M    +     + +
Sbjct: 200 FVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 259

Query: 454 IVVDLLAKN 462
           +++D L KN
Sbjct: 260 VLIDGLCKN 268



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 6/140 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S+ + +L  +      PD +T++ L+  L  +  + EA  LF ++   G EPDV  Y
Sbjct: 479 GRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCY 538

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +++G C++     A+NLF EM   N        P+ VTYT + + + K G      + 
Sbjct: 539 TIMIDGYCKSERIDEAINLFREMHMKN------LVPDIVTYTILFNAVFKSGSNSYEWKF 592

Query: 122 LLQMKDKNIKPNVVTYTSVI 141
           +  ++D N  P V+ Y + +
Sbjct: 593 VNVIRDINPPPRVLKYLAAL 612


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/463 (31%), Positives = 246/463 (53%), Gaps = 7/463 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+     +L +I+ +  TPD VT+TSLI GL  E R  EA  LF ++ + G   D   
Sbjct: 34  MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVC 93

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+  L +T     A ++++ M +        C P+ VT +T+IDGL K G +  A  
Sbjct: 94  YTALIRELLQTGKIPQASSVYKTMTSHG------CVPDVVTLSTMIDGLSKAGRIGAAVR 147

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M+ + + PN V Y+++I G C A+  + A  +  +M      P+ +T+NV++D LC
Sbjct: 148 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLC 207

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM-GCKHTV 239
           K+G ++ A    D M++ G +PD +TYN L+ GFC  G  + A        ++ GC   +
Sbjct: 208 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDI 267

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +++   KNK+IE A++L  ++ + G  P +  +N L  GL ++ ++E A  L  +
Sbjct: 268 HTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 327

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           +  NG   D  TY + IDGL K     EA +LF  + +     D   Y +LI  L ++G+
Sbjct: 328 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGK 387

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A  +++++     VP+VVT S MI GL   G++  A  +F  ME   + PN + +  
Sbjct: 388 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 447

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           LI G  +  +    +E+L +MK+    PD    +I++D L K+
Sbjct: 448 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 490



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 220/477 (46%), Gaps = 42/477 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     V   +      PD VT +++I GL    RI  A  +F  +   G  P+   Y
Sbjct: 105 GKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVY 164

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GLC+      AL +  +M          C P+T+TY  +IDGLCK G V+ A+  
Sbjct: 165 SALIHGLCKARKMDCALEMLAQMKKA------FCTPDTITYNVLIDGLCKSGDVEAARAF 218

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK-----------------------------DW-- 150
             +M +   KP+V TY  +I GFC A                              DW  
Sbjct: 219 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLA 278

Query: 151 -----NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                 EA  L  ++   G  P + T+N +++ LCK G+++EA  LL  ++ +G  PD  
Sbjct: 279 KNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV 338

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TY +L+DG     R   A +LF  M   G       Y+ LI    +  +I  A S+Y  M
Sbjct: 339 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 398

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            S G  PDVV  +T+  GL +  ++  A ++F  M+  G+A +   Y   I GLCK   +
Sbjct: 399 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 458

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A+E+   ++   C  D   YN LIDGLCKSG +E A   F  +      P+V TY+I+
Sbjct: 459 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 518

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           I G C  G  D A  +F DM  +    NV+T+  LI G  +  + +K       MKE
Sbjct: 519 ISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKE 575



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 192/366 (52%), Gaps = 9/366 (2%)

Query: 77  ALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           A+ L E++ ANG       C P   TY  +++GLCK G +++A +LL ++ D    P+VV
Sbjct: 5   AVALMEKITANG-------CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV 57

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TYTS+I G    K   EA +LF EM  +G+  + V +  ++ EL + GK+ +AS +   M
Sbjct: 58  TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
             HG  PD  T +T++DG    GR+  A  +F SME+ G       YS LI+G CK +++
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + AL + ++M      PD + +N L  GL +   VE A   FDEM   G   D +TY   
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237

Query: 316 IDGLCKNGYIVEAV-ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
           I G CK G    A   L     I  C  DI  Y +++D L K+ ++E A+ L   +    
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             P + TY+ ++ GLC  G++++A DL   + +N   P+V+T+  LI G  +     +  
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 357

Query: 435 ELLHKM 440
           +L  +M
Sbjct: 358 KLFKEM 363



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 154/302 (50%), Gaps = 6/302 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++     ++ +I  +  TP   T+ +L+ GLC   R+ EA  L  K+   GC PDV TYT
Sbjct: 282 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 341

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++GL +   +  A  LF+EMA        VC      YT +I  L + G + +A  + 
Sbjct: 342 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVC------YTALIRELLQTGKIPQASSVY 395

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M      P+VVT +++I G   A     A R+F  M  +G+ PN V ++ ++  LCK 
Sbjct: 396 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 455

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            KMD A  +L  M +    PD  TYN L+DG C +G V  A+  F  M   GCK  V++Y
Sbjct: 456 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 515

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +ILI+G+CK    + A  ++ +M S     +VV +  L  GL +  Q+ +A   F  M+ 
Sbjct: 516 NILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKE 575

Query: 303 NG 304
            G
Sbjct: 576 RG 577



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 145/269 (53%), Gaps = 6/269 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+     +L +I+ +  TPD VT+TSLI GL  E R  EA  LF ++ + G   D   
Sbjct: 315 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVC 374

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+  L +T     A ++++ M +        C P+ VT +T+IDGL K G +  A  
Sbjct: 375 YTALIRELLQTGKIPQASSVYKTMTSHG------CVPDVVTLSTMIDGLSKAGRIGAAVR 428

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M+ + + PN V Y+++I G C A+  + A  +  +M      P+ +T+N+++D LC
Sbjct: 429 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 488

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G ++ A    D M++ G +PD +TYN L+ GFC  G  + A  +F  M S  C   V 
Sbjct: 489 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVV 548

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKG 269
           +Y  LI+G CK +++  A   +  M  +G
Sbjct: 549 TYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 178/359 (49%), Gaps = 1/359 (0%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +++A  L+ ++      P + TY +++ G C      EA  L  +++D G  P+VVT+  
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++D L K  +  EA +L   M   G+  D   Y  L+     TG++  A  ++ +M S G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C   V + S +I+G  K   I  A+ ++  M ++G+ P+ V+++ L  GL +  +++ A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           ++  +M++     DT TY   IDGLCK+G +  A   F  +    C+ D+  YN LI G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 355 CKSGRLEIAL-ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           CK+G  + A   L +         ++ TY+ ++  L  + ++++A  L   +  N   P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           + T++ L+ G  ++    + I+LL K+ +    PD    + ++D L K + S  +   F
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 144/281 (51%), Gaps = 1/281 (0%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K++EA  L++ +  +G  P   TYN LL+G C  GR+  A +L   +   GC   V +Y+
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G  K K    A  L+ EM  +G+  D V +  L   L +  ++ +A  ++  M  +
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D  T  T IDGL K G I  AV +F ++       +   Y++LI GLCK+ +++ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           LE+   +      P+ +TY+++I GLC  G ++ AR  F +M E    P+V T+++LI G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 424 FIRINEPSKVIELLHKMKEIN-VMPDASIVSIVVDLLAKNE 463
           F +          L +   IN    D    + +VD LAKN+
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNK 281


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/444 (34%), Positives = 236/444 (53%), Gaps = 9/444 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+T +I G C  +++ +A A F K+R F   P+  TY  +VNGLC+   T  A  +
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTS 139
            +EM +G         P+ VTY+T+I+G CK+G +D+A E+L +M  ++ I P+VVTYTS
Sbjct: 64  LKEMRDGKS-----VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTS 118

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQH 198
           V+ G C     + A  +  EM  +GV+P+  TF+ ++   C   K+DEA +L  +++   
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 178

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
             +PD  TY  L+DGFC +G +  A ++   ME   C   V +YS L++G CK  +++ A
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L L+  M SKG  P+VV + TL  GL   H+V+ A  L DEM       DT +Y   +DG
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDG 298

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV-P 377
            C+ G I EA +LF  +    C  D   Y  L+ G C + RLE A  L  ++     + P
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 358

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +VVTYSI++ G     +  +A +   +M    V PN +T+  LI G  +       +E+L
Sbjct: 359 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVL 418

Query: 438 HKMKEINVMPDASIVSIVVDLLAK 461
             M    V P     + V+  L +
Sbjct: 419 KNMVNKRVEPSVGTFNSVIGALCR 442



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 155/478 (32%), Positives = 247/478 (51%), Gaps = 26/478 (5%)

Query: 4   VSHGFVVLGRILKSC-----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF 52
           V +GF   G + ++C             PD VT+TS++ GLC + ++  A  +  ++++ 
Sbjct: 83  VINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLK 142

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G EPD FT++ L+ G C       AL L++E+   +       +P+ VTYT +IDG CK 
Sbjct: 143 GVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW-----KPDVVTYTALIDGFCKS 197

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G ++KA ++L  M+ +   PNVVTY+S++ G C A D ++A  LF  M  +G  PNVVT+
Sbjct: 198 GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTY 257

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
             ++  LC   K+D A  L+D M      PD  +YN LLDG+C  GR+  AK+LF  M +
Sbjct: 258 TTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMAT 317

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVE 291
             C     +Y+ L+ G+C    +E A  L   M  + GI PDVV ++ +  G     +  
Sbjct: 318 KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFV 377

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +   EM    VA +  TY + IDGLCK G +  A+E+   +   + E  +  +NS+I
Sbjct: 378 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVI 437

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA-- 409
             LC+ G ++ A +L  ++    L P +VTY+ ++ G    G+M+ A +LF  M + A  
Sbjct: 438 GALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKK 497

Query: 410 ------VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                 +VP    F  LIRG  +  E  K + ++ +++     P       +VD L +
Sbjct: 498 SSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 554



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/412 (33%), Positives = 236/412 (57%), Gaps = 11/412 (2%)

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
           C+P V T+T +++G C+ +    AL  FE+M     EF     PN  TY  +++GLCK  
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMR----EF---VAPNERTYNVVVNGLCKAR 55

Query: 114 FVDKAKELLLQMKD-KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVT 171
              KA E+L +M+D K++ P++VTY++VI GFC   + + A  +  EM+ + G+ P+VVT
Sbjct: 56  LTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVT 115

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS-M 230
           +  ++D LC++GKMD A  ++  M   GV PD FT++ L+ G+C   +V+ A +L+   +
Sbjct: 116 YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 175

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S   K  V +Y+ LI+G+CK+  +E A+ +   M  +   P+VV +++L  GL +   +
Sbjct: 176 TSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 235

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           ++A  LF  M   G   +  TY T I GLC    +  A  L   +    C  D  +YN+L
Sbjct: 236 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNAL 295

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           +DG C+ GR+E A +LF+ +     +P+ +TY+ ++ G CN  ++++AR L  +M+  A 
Sbjct: 296 LDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 355

Query: 411 V-PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + P+V+T+ +++ G+ R     +  E + +M   NV P+A   S ++D L K
Sbjct: 356 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 407



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 206/378 (54%), Gaps = 16/378 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +LG +      P+ VT++SL+ GLC    + +A  LF ++   GC P+V TY
Sbjct: 198 GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTY 257

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++GLC       A  L +EM          C P+TV+Y  ++DG C+ G +++AK+L
Sbjct: 258 TTLIHGLCAAHKVDAARLLMDEMT------ATCCPPDTVSYNALLDGYCRLGRIEEAKQL 311

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD--QGVQPNVVTFNVIMDEL 179
             +M  K+  P+ +TYT ++RGFC A    EA R  +E M    G+ P+VVT+++++   
Sbjct: 312 FKEMATKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTAAGIDPDVVTYSIVVAGY 370

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            +  +  EA+  +  MI   V P+A TY++L+DG C  GRV+HA E+  +M +   + +V
Sbjct: 371 SRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSV 430

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +++ +I   C+  +++ A  L   M + G++P +V + TL  G     ++E A++LF+ 
Sbjct: 431 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 490

Query: 300 MQRNGVAADT-------WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           M++    + +         +   I GLCK   I +A+ +   LR  +CE       +++D
Sbjct: 491 MRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVD 550

Query: 353 GLCKSGRLEIALELFRSL 370
           GL ++GR E A +L  S+
Sbjct: 551 GLLRAGRTEEAGKLINSI 568



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 151/311 (48%), Gaps = 47/311 (15%)

Query: 7   GFVVLGRI-----------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGC 54
           G+  LGRI            KSC  PD +T+T L++G C  SR+ EA  L   ++   G 
Sbjct: 298 GYCRLGRIEEAKQLFKEMATKSCL-PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 356

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           +PDV TY+ +V G  R    + A    +EM   N        PN VTY+++IDGLCK G 
Sbjct: 357 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN------VAPNAVTYSSLIDGLCKAGR 410

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           VD A E+L  M +K ++P+V T+ SVI   C   D +EA +L + M   G++P +VT+  
Sbjct: 411 VDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 470

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++   + G+M+ A  L ++M +   +  +   N + +                      
Sbjct: 471 LLEGFSRTGRMEIAYELFEVM-RKKAKKSSSAANLVPEQ--------------------- 508

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                 ++S LI G CK +EI+ A+++  E+ S+  +P       +  GL    + E A 
Sbjct: 509 ------AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAG 562

Query: 295 KLFDEMQRNGV 305
           KL + + + G+
Sbjct: 563 KLINSISKVGL 573



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 140/275 (50%), Gaps = 38/275 (13%)

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEML-------------------------- 266
           M C+ TV +++I+I+G+CK  +++ AL+ + +M                           
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKA 60

Query: 267 ---------SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYRTFI 316
                     K + PD+V ++T+  G  +  +++RA ++  EM  R+G+A D  TY + +
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LPCGVL 375
           DGLC++G +  A E+   +++   E D   +++LI G C + +++ AL+L++  L     
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+VVTY+ +I G C  G ++KA  +   ME    VPNV+T+  L+ G  +  +  + ++
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 436 LLHKMKEINVMPD-ASIVSIVVDLLAKNEISLNSL 469
           L  +M     +P+  +  +++  L A +++    L
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARL 275


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/472 (32%), Positives = 234/472 (49%), Gaps = 41/472 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD   + +LI G C + R  E  ++  ++   G +PD   YT L+NG  + S    A  +
Sbjct: 300 PDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQV 359

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            EEM      F    + NT TY  +I GLCK G ++KA++L  +M    IKP++ TY  +
Sbjct: 360 KEEM------FARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCL 413

Query: 141 IRGF-----------------------------------CYAKDWNEAKRLFIEMMDQGV 165
           I G+                                   C+  D   A  LF EM+  G+
Sbjct: 414 IEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGL 473

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +PN+V +  I+  L K G+ +EA ++L +M   G+ PD F YNT++ GFC  G++   K 
Sbjct: 474 KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
             V M + G K  V++Y   I+GYC+  E++ A   + EML  GI P+ VI   L  G  
Sbjct: 534 YLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYC 593

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +     +AF  F  M   GV  D  T+   I GL KNG + EA+ +F  L       D+ 
Sbjct: 594 KDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVF 653

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y SLI  LCK G L+ A EL   +    + PN+VTY+ +I GLC  G++ KAR+LF  +
Sbjct: 654 TYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGI 713

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            E  +  N +T+  +I G+ +    ++  +L H MK + V PD+ +   ++D
Sbjct: 714 PEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALID 765



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/485 (32%), Positives = 250/485 (51%), Gaps = 40/485 (8%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            + +L  I K   T +A    +++ GLC    +  A  LF ++  +G +P++  YTT+V 
Sbjct: 426 AYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVK 485

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GL +      A+ +   M +          P+   Y T+I G CK G +++ K  L++M 
Sbjct: 486 GLVKEGRFEEAIKILGVMKDQG------LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMI 539

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            K +KPNV TY + I G+C A +   A+R FIEM+D G+ PN V    ++D  CK+G   
Sbjct: 540 AKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTT 599

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A      M+  GV PD  T++ L+ G    G++  A  +F  +   G    VF+Y+ LI
Sbjct: 600 KAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLI 659

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +  CK  +++ A  L+ +M  KGI P++V +N L  GL ++ ++ +A +LFD +   G+A
Sbjct: 660 SNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLA 719

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            ++ TY T I G CK+  + EA +LFH ++++    D   Y +LIDG CK+G  E AL L
Sbjct: 720 RNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSL 779

Query: 367 F--------RSLPC-----------GVLV---------------PNVVTYSIMIGGLCND 392
           F         S P            G L+               PN VTY+I+I   C  
Sbjct: 780 FLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTV 839

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G + +A  LF++M++  V+PNV+T+  L+ G+ RI   S++  L  +M    + PD    
Sbjct: 840 GNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAW 899

Query: 453 SIVVD 457
           S++VD
Sbjct: 900 SVMVD 904



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 229/457 (50%), Gaps = 11/457 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+T+LI   C   ++ E   +   +   GC P++ TY+ ++ GLCR      AL L
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              MAN     G++  P+   Y T+IDG C++    + K +L +M    +KP+ V YT++
Sbjct: 290 KRSMANK----GLL--PDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTAL 343

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GF    D   A ++  EM  + ++ N  T+  ++  LCK G +++A  L   M   G+
Sbjct: 344 INGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGI 403

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD  TYN L++G+     +  A EL + ++        +    ++NG C   ++  A  
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM+S G+KP++VI+ T+  GL +  + E A K+   M+  G++ D + Y T I G C
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + E       +     + ++  Y + I G C++G ++ A   F  +    + PN V
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
             + +I G C DG   KA   F  M +  V+P+V T  +LI G  +  +  + + +  ++
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643

Query: 441 KEINVMPDA-SIVSIVVDLLAKNEISLNSLPSFTVHE 476
            +  ++PD  +  S++ +L  + ++      +F +H+
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEGDLK----AAFELHD 676



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 225/461 (48%), Gaps = 7/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +LG +     +PD   + ++I G C   ++ E  +   ++   G +P+V+TY
Sbjct: 491 GRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTY 550

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              ++G CR      A   F EM +     G+   PN V  T +IDG CK+G   KA   
Sbjct: 551 GAFIHGYCRAGEMQAAERSFIEMLDS----GIA--PNDVICTDLIDGYCKDGNTTKAFAK 604

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M D+ + P+V T++ +I G        EA  +F E++D+G+ P+V T+  ++  LCK
Sbjct: 605 FRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCK 664

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +  A  L D M + G+ P+  TYN L++G C  G +  A+ELF  +   G      +
Sbjct: 665 EGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVT 724

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I GYCK+  +  A  L+  M   G+ PD  ++  L  G  +    E+A  LF  M 
Sbjct: 725 YSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMV 784

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+A+ T  +   IDG  K G ++EA +L   +       +   Y  LI+  C  G ++
Sbjct: 785 EEGIAS-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIK 843

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +LF  +    ++PNV+TY+ ++ G    G+  +   LF +M    + P+ + + +++
Sbjct: 844 EAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMV 903

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
              ++     K ++L+  M    V    ++ +I++D L K+
Sbjct: 904 DAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKH 944



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 228/461 (49%), Gaps = 6/461 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V  G  VL  + +    P+ VT++ +I GLC    + EA  L   +   G  PD + 
Sbjct: 245 VGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYI 304

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G CR   +    ++ +EM      + +  +P+ V YT +I+G  K+  +  A +
Sbjct: 305 YATLIDGFCRQKRSTEGKSMLDEM------YTMGLKPDHVAYTALINGFVKQSDIGGAFQ 358

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  + IK N  TY ++I G C   D  +A+ LF EM   G++P++ T+N +++   
Sbjct: 359 VKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYY 418

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   M++A  LL  + +  +  +A+    +++G C  G +  A ELF  M S G K  + 
Sbjct: 419 KVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIV 478

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ ++ G  K    E A+ +   M  +G+ PDV  +NT+ +G  +  ++E       EM
Sbjct: 479 IYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEM 538

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  + +TY  FI G C+ G +  A   F  +       +      LIDG CK G  
Sbjct: 539 IAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNT 598

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A   FR +    ++P+V T+S++I GL  +G++ +A  +F ++ +  +VP+V T+  L
Sbjct: 599 TKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSL 658

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I    +  +     EL   M +  + P+    + +++ L K
Sbjct: 659 ISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCK 699



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 189/436 (43%), Gaps = 50/436 (11%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G++     V   +L     PD  T+TSLI  LC E  +  A  L   +   G  P++ TY
Sbjct: 631  GKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTY 690

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              L+NGLC+      A  LF+    G  E G+    N+VTY+TII G CK   + +A +L
Sbjct: 691  NALINGLCKLGEIAKARELFD----GIPEKGLA--RNSVTYSTIIAGYCKSANLTEAFQL 744

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ--------------- 166
               MK   + P+   Y ++I G C A +  +A  LF+ M+++G+                
Sbjct: 745  FHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKL 804

Query: 167  -------------------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                               PN VT+ ++++  C  G + EA +L   M +  V P+  TY
Sbjct: 805  GKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTY 864

Query: 208  NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             +LL G+   GR +    LF  M + G K    ++S++++ + K      AL L  +MLS
Sbjct: 865  TSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLS 924

Query: 268  KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            +G+     ++  L   L + + +    K+ DE+++ G      T  T +    + G   E
Sbjct: 925  EGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDE 984

Query: 328  AVELFHT-----LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
            A+ +  +     L +L  EF +R  N    G      L I LE  +SL   +   +V  +
Sbjct: 985  ALRVLESMVRSFLNLL--EFSVRNGNR---GKSNGEMLSIILEGRKSLSGDIQTLDVDLF 1039

Query: 383  SIMIGGLCNDGQMDKA 398
              +     N G+   A
Sbjct: 1040 KELSSSTSNQGKNASA 1055



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 7/303 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G ++    +   I +     ++VT++++I G C  + + EA  LF  +++ G  PD F 
Sbjct: 700 LGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFV 759

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++G C+  +T  AL+LF  M     E G+   P    +  +IDG  K G + +A +
Sbjct: 760 YCALIDGCCKAGNTEKALSLFLGMV----EEGIASTP---AFNALIDGFFKLGKLIEAYQ 812

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+  M D +I PN VTYT +I   C   +  EA++LF+EM  + V PNV+T+  ++    
Sbjct: 813 LVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYN 872

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+  E   L D M+  G++PD   ++ ++D     G    A +L   M S G      
Sbjct: 873 RIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKN 932

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ILI+  CK+  +   L +  E+  +G K  +    TL        + + A ++ + M
Sbjct: 933 LYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992

Query: 301 QRN 303
            R+
Sbjct: 993 VRS 995



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 166/385 (43%), Gaps = 66/385 (17%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           IK N V     + GF    +W  ++ +F +        N+ TF+++   LC +G    A+
Sbjct: 79  IKQNQVIDPKRLHGFF---NWVNSRTVFSQ--------NLSTFSILSLILCNSGLFGNAA 127

Query: 190 RLLDLMIQ----HGVRPDAF-----------------TYNTLLDGFCLTGRVNHAKELFV 228
            +L+ MI     H    D+                   +  L+D +   G +N A  +F+
Sbjct: 128 NVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFL 187

Query: 229 SMES------MGCKHT----------------------------VFSYSILINGYCKNKE 254
             ++      + C ++                            V++Y+ LIN YC+  +
Sbjct: 188 GAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGK 247

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +E    +  +M  KG  P++V ++ +  GL     V+ A +L   M   G+  D + Y T
Sbjct: 248 VEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYAT 307

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            IDG C+     E   +   +  +  + D  AY +LI+G  K   +  A ++   +    
Sbjct: 308 LIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARK 367

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           +  N  TY  +I GLC  G ++KA DLF +M    + P++ T++ LI G+ ++    K  
Sbjct: 368 IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAY 427

Query: 435 ELLHKMKEINVMPDASIVSIVVDLL 459
           ELL ++K+ N+  +A +   +V+ L
Sbjct: 428 ELLIEIKKENLTANAYMCGAIVNGL 452


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 149/444 (33%), Positives = 233/444 (52%), Gaps = 12/444 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD V FT +I GLC E R+ EA ++  +    GCEPD  TY   ++GLC+      A  
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L ++M          C P TVTYT ++DGL K G +D+A  +L QM +K   P + TYT 
Sbjct: 64  LLKKMDEKK------CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTV 117

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL---DLMI 196
           VI G   A    EA+R+F++M+  G +P+   +  ++  LCK+GK +EA  L    +   
Sbjct: 118 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARK 177

Query: 197 QHGVR-PDAFTYNTLLDGFCLTGRVNHAKELFVSME-SMGCKHTVFSYSILINGYCKNKE 254
            H    PD  TY +L+DG C  GR+  A+++F       G      +Y+ +I+G CK   
Sbjct: 178 HHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGR 237

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +E     + EM ++G +PD V +  L  G  +   + +A +++ +M ++G    T TY  
Sbjct: 238 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 297

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +DGLCK G + EA   F  +    C   +  Y++L+DG C  G +  A+ELFR +    
Sbjct: 298 ILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI-RINEPSKV 433
             PN+V+Y+I+I GLC  G++ KA   F  + +  + P+V TF+  + G   R++  S  
Sbjct: 358 CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDG 417

Query: 434 IELLHKMKEINVMPDASIVSIVVD 457
           +EL   M      P+    SI++D
Sbjct: 418 VELFESMVSQGTSPNLHSYSILMD 441



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 246/448 (54%), Gaps = 5/448 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL ++++   +P   T+T +I GL    R+ EA  +F  +   GC PD F Y
Sbjct: 91  GRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 150

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ GLC++     A  L++E AN          P+ VTYT++IDGLCK G + +A+++
Sbjct: 151 TALIKGLCKSGKPEEAYALYKE-ANARKHHATAV-PDVVTYTSLIDGLCKAGRILEARQV 208

Query: 122 L-LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +  ++   P+ VTYTS+I G C      E    F EM ++G +P+ VT+  ++D   
Sbjct: 209 FDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 268

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   + +A R+   M+Q G      TYN +LDG C  GRV  A   F++ME  GC  TV 
Sbjct: 269 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 328

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS L++G+C    +  A+ L+  ML +G +P++V +N +  GL    ++ +A+  F+++
Sbjct: 329 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 388

Query: 301 QRNGVAADTWTYRTFIDGLCKN-GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            +  +  D +T+  F+ GLC+    + + VELF ++       ++ +Y+ L+DG+C++G 
Sbjct: 389 LQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 448

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LE+ALE+FR +    + P+VV ++ +I  LC  G++D+A ++F ++E  +  P+  ++  
Sbjct: 449 LEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWS 507

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMP 447
           L+ G  R     +   L   MK     P
Sbjct: 508 LLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/466 (32%), Positives = 233/466 (50%), Gaps = 18/466 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   F VL R +++   PD VT+   I GLC   R+ +A  L  K+    C P   TYT
Sbjct: 22  RLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYT 81

Query: 63  TLVNGLCRTSHTIVALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            LV+GL +      A+ + E+M   GN        P   TYT +IDGL K G V++A+ +
Sbjct: 82  ALVDGLLKAGRLDEAMAVLEQMVEKGN-------SPTLKTYTVVIDGLSKAGRVEEARRI 134

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG----VQPNVVTFNVIMD 177
            + M     +P+   YT++I+G C +    EA  L+ E   +       P+VVT+  ++D
Sbjct: 135 FVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLID 194

Query: 178 ELCKNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
            LCK G++ EA ++  D  ++ G  PDA TY +++DG C  GRV    E F  M + G +
Sbjct: 195 GLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 254

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +Y+ LI+G+ K K I  A  +Y +ML  G     V +N +  GL +  +V  A+  
Sbjct: 255 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 314

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F  M+  G  A   TY   +DG C  G +  AVELF  +    CE ++ +YN +I GLC+
Sbjct: 315 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 374

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD---LFLDMEENAVVPN 413
           +G+L  A   F  L    L P+V T++  + GLC   ++D   D   LF  M      PN
Sbjct: 375 AGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ--RLDTVSDGVELFESMVSQGTSPN 432

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           + ++ +L+ G  R       +E+  +M    V PD  + + ++  L
Sbjct: 433 LHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWL 478



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 143/426 (33%), Positives = 230/426 (53%), Gaps = 13/426 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV----FGCEPD 57
           GRV     +   +L +   PDA  +T+LIKGLC   +  EA AL+ +           PD
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPD 185

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           V TYT+L++GLC+    + A  +F++ A   G       P+ VTYT+IIDGLCK G V++
Sbjct: 186 VVTYTSLIDGLCKAGRILEARQVFDDEAVERGFI-----PDAVTYTSIIDGLCKLGRVEE 240

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
             E   +M+++  +P+ VTY ++I GF  AK   +A R++ +M+  G   + VT+N+I+D
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LCK G++ EA      M + G      TY+ L+DGFC  G V+ A ELF  M   GC+ 
Sbjct: 301 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE-IHQVERAFKL 296
            + SY+I+I G C+  ++  A   + ++L + + PDV   N    GL + +  V    +L
Sbjct: 361 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVEL 420

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F+ M   G + +  +Y   +DG+C+ G +  A+E+F  +       D+  +N+LI  LC 
Sbjct: 421 FESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCI 480

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +GR++ ALE+FR L      P+  +Y  ++ GL    +M++AR L   M+     P    
Sbjct: 481 AGRVDEALEVFRELE-RRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPR--H 537

Query: 417 FDMLIR 422
           +D+ +R
Sbjct: 538 YDLTVR 543



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 199/372 (53%), Gaps = 5/372 (1%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C P+ V +T +I+GLC+E  +D+A  +L +      +P+ VTY   I G C A+  ++A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +L  +M ++   P  VT+  ++D L K G++DEA  +L+ M++ G  P   TY  ++DG 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG----I 270
              GRV  A+ +FV M   GC+   F Y+ LI G CK+ + E A +LY E  ++      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLF-DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
            PDVV + +L  GL +  ++  A ++F DE    G   D  TY + IDGLCK G + E  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           E FH +R    E D   Y +LIDG  K+  +  A  ++R +     V + VTY+I++ GL
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C  G++ +A   FL MEE   V  V+T+  L+ GF      S  +EL  +M +    P+ 
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL 362

Query: 450 SIVSIVVDLLAK 461
              +I++  L +
Sbjct: 363 VSYNIIIRGLCR 374



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 167/319 (52%), Gaps = 7/319 (2%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            P++V F V+++ LC+  ++DEA  +L+  ++ G  PD  TYN  +DG C   RV+ A +
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M+   C  T  +Y+ L++G  K   ++ A+++  +M+ KG  P +  +  +  GL 
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--- 342
           +  +VE A ++F +M  NG   D + Y   I GLCK+G   EA  L+      K      
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 343 -DIRAYNSLIDGLCKSGRLEIALELF--RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            D+  Y SLIDGLCK+GR+  A ++F   ++  G  +P+ VTY+ +I GLC  G++++  
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERG-FIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           + F +M      P+ +T+  LI GF++     K   +  +M +   +      +I++D L
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 460 AKNEISLNSLPSFTVHEQQ 478
            K      +  +F   E++
Sbjct: 303 CKAGRVAEAYATFLAMEER 321



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 12/309 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV  G      +    + PDAVT+ +LI G      I +A  ++ ++   G      T
Sbjct: 235 LGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 294

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+      A   F  M          C    VTY+ ++DG C EG V  A E
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERG------CVATVVTYSALMDGFCSEGNVSAAVE 348

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M D+  +PN+V+Y  +IRG C A    +A   F +++ + + P+V TFN  +  LC
Sbjct: 349 LFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLC 408

Query: 181 KNGKMDEAS---RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
           +  ++D  S    L + M+  G  P+  +Y+ L+DG C  G +  A E+F  M S G   
Sbjct: 409 Q--RLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAP 466

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            V  ++ LI   C    ++ AL ++ E L +   PD   + +L  GL    ++E A  L 
Sbjct: 467 DVVVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDGLSRCERMEEARLLS 525

Query: 298 DEMQRNGVA 306
             M+  G A
Sbjct: 526 FHMKLQGCA 534



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 40/272 (14%)

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           M C   + +++++ING C+ K ++ A S+    +  G +PD V +N    GL +  +V+ 
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL----------------- 335
           AF+L  +M        T TY   +DGL K G + EA+ +   +                 
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 336 ------------RIL------KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC----G 373
                       RI        C  D   Y +LI GLCKSG+ E A  L++         
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVPNVITFDMLIRGFIRINEPSK 432
             VP+VVTY+ +I GLC  G++ +AR +F D   E   +P+ +T+  +I G  ++    +
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             E  H+M+     PDA   + ++D   K ++
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 272


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 160/476 (33%), Positives = 254/476 (53%), Gaps = 13/476 (2%)

Query: 3   RVSHGFVVLGRILKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           R +   V L R ++ C   PD VT+ +LI+GLC  + +  A  L  ++   G EP+V  Y
Sbjct: 108 RRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVY 167

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++G C+T        +FEEM +G G      EP+ V YT +ID LC+ G V KA  +
Sbjct: 168 SCLLHGYCKTGRWESVGKVFEEM-SGRG-----IEPDVVMYTALIDSLCRHGKVKKAARV 221

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M ++ ++PNVVTY  +I   C      EA  L   M ++GVQP+VVT+N ++  L  
Sbjct: 222 MDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSS 281

Query: 182 NGKMDEASRLLDLMIQ--HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
             +MDEA  LL+ M+Q    VRPD  T+N+++ G C  G +  A ++   M   GC+  +
Sbjct: 282 VLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNL 341

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            ++++LI G  +  +++ A+ L  EM S G++PD   ++ L  G  ++ QVERA     E
Sbjct: 342 VAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSE 401

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+  G+  +   Y   +  +C  G + +A +LF+ +    C+ D  AY+++I G  KSG 
Sbjct: 402 MRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGE 460

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            +IA E  + +    L+P+ VTYSI I      G +  A  +   M  +  VP+V  FD 
Sbjct: 461 KKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDS 520

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA---KNEISLNSLPSF 472
           LI+G+    +  K++EL  +M   +V  D  I+S +V  L    + +  L SLP F
Sbjct: 521 LIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQSLPGF 576



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 222/443 (50%), Gaps = 41/443 (9%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D  +Y T++  LCR      AL L   M++   E  +   PN ++YTT++  LC +    
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSH---EPRLASRPNAISYTTLMRALCADRRAA 111

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  LL  M+D  ++P+VVTY ++IRG C A D + A  L  EM + G++PNVV ++ ++
Sbjct: 112 QAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              CK G+ +   ++ + M   G+ PD   Y  L+D  C  G+V  A  +   M   G +
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +Y++LIN  CK   +  AL L   M  KG++PDVV +NTL  GL  + +++ A  L
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291

Query: 297 FDEMQR--NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            +EM +    V  D  T+ + I GLCK G++ +A+++   +    C  ++ A+N LI GL
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG-------------------------- 388
            +  +++ A+EL   +    L P+  TYSI+I G                          
Sbjct: 352 LRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEP 411

Query: 389 ---------LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
                    +C+ G M +ARDLF +M+ N  + +   +  +I G  +  E     E L  
Sbjct: 412 VHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL-DAAAYSTMIHGAFKSGEKKIAEEFLKD 470

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M +  ++PDA   SI +++ AK+
Sbjct: 471 MIDEGLIPDAVTYSIPINMFAKS 493



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 175/373 (46%), Gaps = 14/373 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     V+  + +    P+ VT+  LI  +C E  + EA  L   +   G +PDV TY
Sbjct: 213 GKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTY 272

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GL        A+ L EEM  G         P+ +T+ ++I GLCK G++ +A ++
Sbjct: 273 NTLITGLSSVLEMDEAMALLEEMMQGETRV----RPDLMTFNSVIHGLCKIGWMRQALQV 328

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M +   + N+V +  +I G        +A  L  EM   G+QP+  T++++++  CK
Sbjct: 329 RAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCK 388

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++ A   L  M   G+ P+   Y  LL   C  G +  A++LF  M+   CK    +
Sbjct: 389 MRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR-NCKLDAAA 447

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN---TLFVGLFEIHQVERAFKLFD 298
           YS +I+G  K+ E + A     +M+ +G+ PD V ++    +F    ++   ER  K   
Sbjct: 448 YSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLK--- 504

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M  +G   D   + + I G    G   + +EL   +       D +  ++++  L  S 
Sbjct: 505 QMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGAS- 563

Query: 359 RLEIALELFRSLP 371
            +E   +L +SLP
Sbjct: 564 -IE-GQKLLQSLP 574


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 149/461 (32%), Positives = 241/461 (52%), Gaps = 12/461 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++     VL  +L+    PD +T+TSLI G C  + + EA  L  K++  G  PD   
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+NGLC+ +       L EEM     E      P+T +Y T++  LC+ G  ++A +
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGRE------PDTFSYNTVVACLCESGKYEEAGK 253

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L +M +K   P+VVTY S++ GFC     +EA+RL  +M+ +   P V+T+  ++    
Sbjct: 254 ILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFS 313

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  ++ +A R+++ M + G+ PD  TYN LLDG C  G++  A EL   M    C   V 
Sbjct: 314 RADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVV 373

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YSIL+NG CK  +++ A  L   ML +G +P++V  NT+  G  +  +V+   K+ + M
Sbjct: 374 TYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELM 433

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +      D  TY T IDG CK   + +A        IL    D  +Y+S+++GLC +G++
Sbjct: 434 KEVSCTPDVVTYSTLIDGYCKANRMQDA------FAILGISPDKASYSSMLEGLCSTGKV 487

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A E+   +      P    Y+++IGGLC+  + D+A  +   M E    PN+ T+ +L
Sbjct: 488 EEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSIL 547

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I G  +       I +L  M E   +PD +  + ++D   K
Sbjct: 548 INGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCK 588



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 243/476 (51%), Gaps = 41/476 (8%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P A T+  LI GLC   RI EA  L  ++    C PD   Y  L+ GLC+      A N
Sbjct: 89  SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARN 148

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + + M   +      C P+ +TYT++I G C+   +D+A++L+ +MK+  + P+ V Y +
Sbjct: 149 VLKMMLERS------CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNA 202

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G C      E  +L  EM++ G +P+  ++N ++  LC++GK +EA ++L+ MI+  
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK 262

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD  TYN+L+DGFC   +++ A+ L   M    C  TV +Y+ LI G+ +   +  A 
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAY 322

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +  +M   GI PD+V +N L  GL +  ++E A +L + M     A D  TY   ++GL
Sbjct: 323 RVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGL 382

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA---LELFRSLPCGVLV 376
           CK G + +A  L   +    C+ ++  +N++IDG CK+G+++     LEL + + C    
Sbjct: 383 CKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSC---T 439

Query: 377 PNVVTYSI-----------------------------MIGGLCNDGQMDKARDLFLDMEE 407
           P+VVTYS                              M+ GLC+ G++++A+++   M +
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTK 499

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
               P    + ++I G   +    + +++L  M E    P+    SI+++ L K +
Sbjct: 500 QGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTK 555



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 221/423 (52%), Gaps = 12/423 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +L ++++    PD VT+ SL+ G C  S++ EA  L   +    C P V TY
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL+ G  R      A  + E+M      F     P+ VTY  ++DGLCK G +++A EL
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDM------FKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +K+  P+VVTY+ ++ G C     ++A+ L   M+++G QPN+VTFN ++D  CK
Sbjct: 360 LEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCK 419

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+DE  ++L+LM +    PD  TY+TL+DG+C   R+  A  +      +G      S
Sbjct: 420 AGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI------LGISPDKAS 473

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS ++ G C   ++E A  +   M  +G  P    +  +  GL ++ + + A K+   M 
Sbjct: 474 YSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMS 533

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   + +TY   I+GLCK   + +A+ +   +    C  D+  Y SLIDG CK  +++
Sbjct: 534 ERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMD 593

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A + F+++      P+ + Y+I+I G C  G ++KA ++   M E    P+  T+  L+
Sbjct: 594 AAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653

Query: 422 RGF 424
           R  
Sbjct: 654 RSL 656



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 225/442 (50%), Gaps = 18/442 (4%)

Query: 21  PDAVTFTSLIKGL--CAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           P   T+ +LI G      S+++   A     R F   PDV T+ T++   C+      AL
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFS--PDVITHNTILKAYCQIGDLDRAL 79

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           + F           + C P   TY  +I GLC+   +D+A +LL +M  K+  P+   Y 
Sbjct: 80  SHFRG--------KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYN 131

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G C     + A+ +   M+++   P+V+T+  ++   C+   +DEA +L++ M + 
Sbjct: 132 CLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKES 191

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD   YN LL+G C   ++    +L   M   G +   FSY+ ++   C++ + E A
Sbjct: 192 GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEA 251

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             +  +M+ K   PDVV +N+L  G  ++ +++ A +L ++M     A    TY T I G
Sbjct: 252 GKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGG 311

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             +   + +A  +   +       D+  YN L+DGLCK+G+LE A EL   +      P+
Sbjct: 312 FSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPD 371

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIE 435
           VVTYSI++ GLC  G++D AR L   M E    PN++TF+ +I GF    +++E  KV+E
Sbjct: 372 VVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLE 431

Query: 436 LLHKMKEINVMPDASIVSIVVD 457
           L   MKE++  PD    S ++D
Sbjct: 432 L---MKEVSCTPDVVTYSTLID 450



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 160/284 (56%), Gaps = 12/284 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V    ++L  +L+    P+ VTF ++I G C   ++ E   +   ++   C PDV T
Sbjct: 385 LGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVT 444

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TL++G C+ +           M +     G+   P+  +Y+++++GLC  G V++A+E
Sbjct: 445 YSTLIDGYCKANR----------MQDAFAILGI--SPDKASYSSMLEGLCSTGKVEEAQE 492

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++  M  +   P    Y  +I G C  +  +EA ++   M ++G +PN+ T++++++ LC
Sbjct: 493 VMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLC 552

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++++A  +LD+M++ G  PD  TY +L+DGFC   +++ A + F +M   GC+    
Sbjct: 553 KTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKL 612

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +Y+ILI+G+C++  +E A+ +   ML KG  PD   + +L   L
Sbjct: 613 AYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 2/227 (0%)

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           K +  +Y  LI G+ +    +  L + +EML++   PDV+ HNT+     +I  ++RA  
Sbjct: 21  KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
            F    +   +   +TY   I GLC+   I EA +L   +    C  D   YN LI GLC
Sbjct: 81  HF--RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K G+++ A  + + +     VP+V+TY+ +I G C    +D+AR L   M+E+ + P+ +
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            ++ L+ G  + N+  +V +LL +M E    PD    + VV  L ++
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 143/403 (35%), Positives = 237/403 (58%), Gaps = 9/403 (2%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LG+++K  F PD VTFTSLI G C  +R+ EA ++  ++   G +PDV  YTT+++ LC+
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
             H   AL+LF++M N    +G+   P+ V YT++++GLC  G    A  LL  M  + I
Sbjct: 190 NGHVNYALSLFDQMEN----YGI--RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           KP+V+T+ ++I  F     + +A+ L+ EM+   + PN+ T+  +++  C  G +DEA +
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +  LM   G  PD   Y +L++GFC   +V+ A ++F  M   G      +Y+ LI G+ 
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR---NGVAA 307
           +  +   A  ++S M+S+G+ P++  +N L   L    +V++A  +F++MQ+   +GVA 
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           + WTY   + GLC NG + +A+ +F  +R  + +  I  Y  +I G+CK+G+++ A+ LF
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
            SLP   + PNVVTY+ MI GL  +G   +A  LF  M+E+ V
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  264 bits (674), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 150/429 (34%), Positives = 242/429 (56%), Gaps = 13/429 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T   L+   C  S+   A++   K+   G EPD+ T+T+L+NG C  +    A+++ 
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M     E G+  +P+ V YTTIID LCK G V+ A  L  QM++  I+P+VV YTS++
Sbjct: 166 NQMV----EMGI--KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +  W +A  L   M  + ++P+V+TFN ++D   K GK  +A  L + MI+  + 
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+ FTY +L++GFC+ G V+ A+++F  ME+ GC   V +Y+ LING+CK K+++ A+ +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EM  KG+  + + + TL  G  ++ +   A ++F  M   GV  +  TY   +  LC 
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399

Query: 322 NGYIVEAVELFHTLRILKCEFD-----IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           NG + +A+ +F  ++  K E D     I  YN L+ GLC +G+LE AL +F  +    + 
Sbjct: 400 NGKVKKALMIFEDMQ--KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
             ++TY+I+I G+C  G++  A +LF  +    V PNV+T+  +I G  R     +   L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517

Query: 437 LHKMKEINV 445
             KMKE  V
Sbjct: 518 FRKMKEDGV 526



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 200/371 (53%), Gaps = 9/371 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     ++ ++++    PD V +T++I  LC    +  A +LF ++  +G  PDV  YT
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +LVNGLC +     A +L   M           +P+ +T+  +ID   KEG    A+EL 
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRK------IKPDVITFNALIDAFVKEGKFLDAEELY 270

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M   +I PN+ TYTS+I GFC     +EA+++F  M  +G  P+VV +  +++  CK 
Sbjct: 271 NEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K+D+A ++   M Q G+  +  TY TL+ GF   G+ N A+E+F  M S G    + +Y
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390

Query: 243 SILINGYCKNKEIEGALSLYSEMLSK---GIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           ++L++  C N +++ AL ++ +M  +   G+ P++  +N L  GL    ++E+A  +F++
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M++  +     TY   I G+CK G +  AV LF +L     + ++  Y ++I GL + G 
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510

Query: 360 LEIALELFRSL 370
              A  LFR +
Sbjct: 511 KHEAHVLFRKM 521



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 197/389 (50%), Gaps = 9/389 (2%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           AL+LF  M            P+ + +T +++ + K    D    L   ++   +  ++ T
Sbjct: 56  ALDLFTHMVESRPL------PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
              ++  FC +     A     +MM  G +P++VTF  +++  C   +M+EA  +++ M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G++PD   Y T++D  C  G VN+A  LF  ME+ G +  V  Y+ L+NG C +    
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A SL   M  + IKPDV+  N L     +  +   A +L++EM R  +A + +TY + I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +G C  G + EA ++F+ +    C  D+ AY SLI+G CK  +++ A+++F  +    L 
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKV 433
            N +TY+ +I G    G+ + A+++F  M    V PN+ T+++L+       ++ +   +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
            E + K +   V P+    ++++  L  N
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYN 438



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 175/338 (51%), Gaps = 9/338 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V++   +  ++      PD V +TSL+ GLC   R  +A +L   +     +PDV T+
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++   +    + A  L+ EM        +   PN  TYT++I+G C EG VD+A+++
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIR------MSIAPNIFTYTSLINGFCMEGCVDEARQM 304

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M+ K   P+VV YTS+I GFC  K  ++A ++F EM  +G+  N +T+  ++    +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM---GCKHT 238
            GK + A  +   M+  GV P+  TYN LL   C  G+V  A  +F  M+     G    
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           +++Y++L++G C N ++E AL ++ +M  + +   ++ +  +  G+ +  +V+ A  LF 
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            +   GV  +  TY T I GL + G   EA  LF  ++
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 167/308 (54%), Gaps = 9/308 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +L  + K    PD +TF +LI     E + ++A  L+ ++      P++FTY
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L+NG C       A  +F  M          C P+ V YT++I+G CK   VD A ++
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKG------CFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K +  N +TYT++I+GF      N A+ +F  M+ +GV PN+ T+NV++  LC 
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399

Query: 182 NGKMDEASRLLDLMIQH---GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           NGK+ +A  + + M +    GV P+ +TYN LL G C  G++  A  +F  M        
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           + +Y+I+I G CK  +++ A++L+  + SKG+KP+VV + T+  GLF       A  LF 
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519

Query: 299 EMQRNGVA 306
           +M+ +GV+
Sbjct: 520 KMKEDGVS 527



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 184/364 (50%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           ++A +L   M +    P+++ +T ++      K ++    L   +   GV  ++ T N++
Sbjct: 54  NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           M+  C++ +   AS  L  M++ G  PD  T+ +L++GFCL  R+  A  +   M  MG 
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           K  V  Y+ +I+  CKN  +  ALSL+ +M + GI+PDVV++ +L  GL    +   A  
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L   M +  +  D  T+   ID   K G  ++A EL++ +  +    +I  Y SLI+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             G ++ A ++F  +      P+VV Y+ +I G C   ++D A  +F +M +  +  N I
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
           T+  LI+GF ++ +P+   E+   M    V P+    ++++  L  N     +L  F   
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413

Query: 476 EQQE 479
           +++E
Sbjct: 414 QKRE 417



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 163/306 (53%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y  ++R   ++  +NEA  LF  M++    P+++ F  +++ + K  K D    L D + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             GV  D +T N L++ FC + +   A      M  +G +  + +++ LING+C    +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+S+ ++M+  GIKPDVV++ T+   L +   V  A  LFD+M+  G+  D   Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLC +G   +A  L   +   K + D+  +N+LID   K G+   A EL+  +    + 
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN+ TY+ +I G C +G +D+AR +F  ME     P+V+ +  LI GF +  +    +++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 437 LHKMKE 442
            ++M +
Sbjct: 340 FYEMSQ 345



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 10/229 (4%)

Query: 243 SILINGYCKNKEI----------EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           S  +  +C  +EI            AL L++ M+     P ++    L   + ++ + + 
Sbjct: 31  SFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV 90

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
              L D +Q  GV+ D +T    ++  C++     A      +  L  E DI  + SLI+
Sbjct: 91  VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G C   R+E A+ +   +    + P+VV Y+ +I  LC +G ++ A  LF  ME   + P
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP 210

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +V+ +  L+ G            LL  M +  + PD    + ++D   K
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 144/459 (31%), Positives = 246/459 (53%), Gaps = 9/459 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF  L  ++     PD +  T+LI+G C   +  +AA +   L   G  PDV TY
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITY 175

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C+      AL++ + M+           P+ VTY TI+  LC  G + +A E+
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMS---------VSPDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  ++  P+V+TYT +I   C      +A +L  EM D+G  P+VVT+NV+++ +CK
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA + L+ M   G +P+  T+N +L   C TGR   A++L   M   G   +V +
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILIN  C+   +  A+ +  +M   G +P+ + +N L  G  +  +++RA +  + M 
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY T +  LCK+G + +AVE+ + L    C   +  YN++IDGL K+G+  
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++L   +    L P+ +TYS ++GGL  +G++D+A   F + E   V PN +TF+ ++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIM 526

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            G  +  +  + I+ L  M      P  +  +I+++ LA
Sbjct: 527 LGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLA 565



 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 235/450 (52%), Gaps = 9/450 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+      +L  +  S   PD +T+  +I G C    I  A ++  ++ V    PDV T
Sbjct: 150 MGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVT 206

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++  LC +     A+ + + M   +      C P+ +TYT +I+  C++  V +A +
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEATCRDSGVGQAMK 260

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M+D+   P+VVTY  ++ G C     +EA +   +M   G QPNV+T N+I+  +C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+  +A +LL  M++ G  P   T+N L++  C  G +  A ++   M   GC+    
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSL 380

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ L++G+CK K+++ A+     M+S+G  PD+V +NT+   L +  +VE A ++ +++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G +    TY T IDGL K G   +A++L   +R    + D   Y+SL+ GL + G++
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A++ F       + PN VT++ ++ GLC   Q D+A D  + M      P   ++ +L
Sbjct: 501 DEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTIL 560

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDAS 450
           I G        + +ELL+++    +M  +S
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGLMKRSS 590



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 196/417 (47%), Gaps = 45/417 (10%)

Query: 85  ANGNGEFGVV--------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           +NGNG F            E N      +  G  +EGF     + L  M      P+++ 
Sbjct: 85  SNGNGHFSSANSSFVLEDVESNNHLRQLVRTGELEEGF-----KFLENMVYHGNVPDIIP 139

Query: 137 YTSVIRGFCYAKDWNEAKRLF-------------------------------IEMMDQ-G 164
            T++IRGFC      +A ++                                + ++D+  
Sbjct: 140 CTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V P+VVT+N I+  LC +GK+ +A  +LD M+Q    PD  TY  L++  C    V  A 
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAM 259

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +L   M   GC   V +Y++L+NG CK   ++ A+   ++M S G +P+V+ HN +   +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               +   A KL  +M R G +    T+   I+ LC+ G +  A+++   +    C+ + 
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNS 379

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            +YN L+ G CK  +++ A+E    +      P++VTY+ M+  LC DG+++ A ++   
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +      P +IT++ +I G  +  +  K I+LL +M+  ++ PD    S +V  L++
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 148/448 (33%), Positives = 233/448 (52%), Gaps = 19/448 (4%)

Query: 4   VSHGFVVLGRILKSC-----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF 52
           + HGF   GR+  +            F PD  TF +L+ GLC    +  A  +   +   
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G +PDV+TY ++++GLC+      A+   ++M   +      C PNTVTY T+I  LCKE
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD------CSPNTVTYNTLISTLCKE 378

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
             V++A EL   +  K I P+V T+ S+I+G C  ++   A  LF EM  +G +P+  T+
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N+++D LC  GK+DEA  +L  M   G      TYNTL+DGFC   ++  A+E+F  ME 
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEV 498

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G      +Y+ LI+G CK++ +E A  L  +M+ +G KPD   +N+L         +++
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKK 558

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  +   M  NG   D  TY T I GLCK G +  A +L  ++++        AYN +I 
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQ 618

Query: 353 GLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCN-DGQMDKARDLFLDMEENAV 410
           GL +  +   A+ LFR  L      P+ V+Y I+  GLCN  G + +A D  +++ E   
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLH 438
           VP   +  ML  G + ++    +++L++
Sbjct: 679 VPEFSSLYMLAEGLLTLSMEETLVKLVN 706



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/438 (31%), Positives = 237/438 (54%), Gaps = 6/438 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             PD  TFT++++G   E  +  A  +  ++  FGC     +   +V+G C+      AL
Sbjct: 220 LVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           N  +EM+N +G F     P+  T+ T+++GLCK G V  A E++  M  +   P+V TY 
Sbjct: 280 NFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           SVI G C   +  EA     +M+ +   PN VT+N ++  LCK  +++EA+ L  ++   
Sbjct: 335 SVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  T+N+L+ G CLT     A ELF  M S GC+   F+Y++LI+  C   +++ A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L++  +M   G    V+ +NTL  G  + +++  A ++FDEM+ +GV+ ++ TY T IDG
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDG 514

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK+  + +A +L   + +   + D   YNSL+   C+ G ++ A ++ +++      P+
Sbjct: 515 LCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +VTY  +I GLC  G+++ A  L   ++   +      ++ +I+G  R  + ++ I L  
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFR 634

Query: 439 KMKEIN-VMPDASIVSIV 455
           +M E N   PDA    IV
Sbjct: 635 EMLEQNEAAPDAVSYRIV 652



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 217/442 (49%), Gaps = 7/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD   +  ++  L   + +        K+ V+G +PDV T+  L+  LCR      A+ +
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E+M +    +G+V  P+  T+TTI+ G  +EG +D A  +  QM +     + V+   +
Sbjct: 212 LEDMPS----YGLV--PDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           + GFC      +A     EM +Q G  P+  TFN +++ LCK G +  A  ++D+M+Q G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD +TYN+++ G C  G V  A E    M +  C     +Y+ LI+  CK  ++E A 
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L   + SKGI PDV   N+L  GL        A +LF+EM+  G   D +TY   ID L
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C  G + EA+ +   + +  C   +  YN+LIDG CK+ ++  A E+F  +    +  N 
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNS 505

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTY+ +I GLC   +++ A  L   M      P+  T++ L+  F R  +  K  +++  
Sbjct: 506 VTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQA 565

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M      PD      ++  L K
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCK 587



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/334 (38%), Positives = 186/334 (55%), Gaps = 8/334 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V      L +++    +P+ VT+ +LI  LC E+++ EA  L   L   G  PDV T
Sbjct: 343 LGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +L+ GLC T +  VA+ LFEEM +        CEP+  TY  +ID LC +G +D+A  
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKG------CEPDEFTYNMLIDSLCSKGKLDEALN 456

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L QM+      +V+TY ++I GFC A    EA+ +F EM   GV  N VT+N ++D LC
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+ ++++AS+L+D MI  G +PD FTYN+LL  FC  G +  A ++  +M S GC+  + 
Sbjct: 517 KSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI+G CK   +E A  L   +  KGI      +N +  GLF   +   A  LF EM
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREM 636

Query: 301 -QRNGVAADTWTYRTFIDGLCK-NGYIVEAVELF 332
            ++N  A D  +YR    GLC   G I EAV+  
Sbjct: 637 LEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFL 670



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 214/448 (47%), Gaps = 6/448 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K  F+P+   +  ++  L       +   +   ++  GCE     +  L+    +     
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQD 135

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
             L +   M +   +FG+  +P+T  Y  +++ L     +   +    +M    IKP+V 
Sbjct: 136 EILGVVHWMID---DFGL--KPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVS 190

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T+  +I+  C A     A  +  +M   G+ P+  TF  IM    + G +D A R+ + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQM 250

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM-GCKHTVFSYSILINGYCKNKE 254
           ++ G      + N ++ GFC  GRV  A      M +  G     ++++ L+NG CK   
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           ++ A+ +   ML +G  PDV  +N++  GL ++ +V+ A +  D+M     + +T TY T
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNT 370

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I  LCK   + EA EL   L       D+  +NSLI GLC +    +A+ELF  +    
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             P+  TY+++I  LC+ G++D+A ++   ME +    +VIT++ LI GF + N+  +  
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAE 490

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
           E+  +M+   V  ++   + ++D L K+
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKS 518


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  267 bits (682), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 236/454 (51%), Gaps = 7/454 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+      +   +   F PD  T+ +L+ GLC       A  +   + + G +PD++TY
Sbjct: 287 GRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTY 346

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++GLC+      A+ + ++M + +      C PN VTY  II  LCKE  VD+A E+
Sbjct: 347 NSLISGLCKLGEIEEAVKILDQMVSRD------CSPNAVTYNAIISSLCKENRVDEATEI 400

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K I P+V T+ S+I+G C + +   A  LF EM  +G +P+  T+N+++D LC 
Sbjct: 401 ARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCS 460

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + K++EA  LL  M  +G   +   YNTL+DGFC   R+  A+E+F  ME  G      +
Sbjct: 461 SRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVT 520

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G CK+K +E A  L  +M+ +G++PD   +N+L     +   +++A  +   M 
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMT 580

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   D  TY T I GLCK G +  A  L  ++++        AYN +I  L K  R  
Sbjct: 581 SSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTH 640

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCN-DGQMDKARDLFLDMEENAVVPNVITFDML 420
            A+ LFR +      P+ +TY I+  GLCN  G + +A D  ++M E   +P   +F ML
Sbjct: 641 EAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVML 700

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
             G   ++    +++L+  + E     +  I +I
Sbjct: 701 AEGLCTLSMDDTLVKLVDMIMEKAKFSEREISTI 734



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 240/457 (52%), Gaps = 6/457 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +PD  TFT++++G      +  A  +  ++  +GC     T   L+NG C+      AL
Sbjct: 234 LSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQAL 293

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +  +E  +          P+  TY T+++GLCK G    A E++  M    + P++ TY 
Sbjct: 294 SFIQEAVSEG------FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYN 347

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I G C   +  EA ++  +M+ +   PN VT+N I+  LCK  ++DEA+ +  L+   
Sbjct: 348 SLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK 407

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  T+N+L+ G CL+     A +LF  M+  GC+   F+Y++LI+  C ++++E A
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+L  EM   G   +VVI+NTL  G  +  ++E A ++FDEM+  GV+ D+ TY T IDG
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK+  + +A +L   + +     D   YNSL+   CK+G ++ A ++ +++      P+
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPD 587

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +VTY+ +I GLC  G++  A  L   ++   +V     ++ +I+   + N   + + L  
Sbjct: 588 IVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFR 647

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
           +M + +  PDA    IV   L      +     FTV 
Sbjct: 648 EMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVE 684



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/359 (35%), Positives = 202/359 (56%), Gaps = 13/359 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +L +++    +P+AVT+ ++I  LC E+R+ EA  +   L   G  PDV T
Sbjct: 356 LGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCT 415

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +L+ GLC +S+   A++LFEEM  G G     C P+  TY  +ID LC    +++A  
Sbjct: 416 FNSLIQGLCLSSNHKSAMDLFEEM-KGKG-----CRPDEFTYNMLIDSLCSSRKLEEALN 469

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M+      NVV Y ++I GFC  K   EA+ +F EM  QGV  + VT+N ++D LC
Sbjct: 470 LLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLC 529

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+ ++++A++L+D MI  G+RPD FTYN+LL  FC TG +  A ++  +M S GC   + 
Sbjct: 530 KSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIV 589

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G CK   ++ A  L   +  KG+      +N +   LF+ ++   A +LF EM
Sbjct: 590 TYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREM 649

Query: 301 QRNGVAADTWTYRTFIDGLCK-NGYIVEAVELFHTLRILKCEFDIRAYNS---LIDGLC 355
                  D  TY+    GLC   G I EAV+   T+ +++   +I  ++S   L +GLC
Sbjct: 650 LDKSEPPDAITYKIVYRGLCNGGGPIGEAVDF--TVEMIE-RGNIPEFSSFVMLAEGLC 705



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 187/348 (53%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T+  +I  LCK   V  A  ++ +M    + P+  T+T++++G+    + + A R+  +M
Sbjct: 205 TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQM 264

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           ++ G     VT NV+++  CK G++D+A   +   +  G RPD FTYNTL++G C  G  
Sbjct: 265 VEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHA 324

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
            HA E+  +M   G    +++Y+ LI+G CK  EIE A+ +  +M+S+   P+ V +N +
Sbjct: 325 KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L + ++V+ A ++   +   G+  D  T+ + I GLC +     A++LF  ++   C
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGC 444

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D   YN LID LC S +LE AL L + +       NVV Y+ +I G C + ++++A +
Sbjct: 445 RPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEE 504

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +F +ME   V  + +T++ LI G  +        +L+ +M    + PD
Sbjct: 505 IFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 206/444 (46%), Gaps = 41/444 (9%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P  FT   L+  L R +  + AL +F   A+    F     P++  Y  I+  L K G  
Sbjct: 59  PPDFTPKQLIETLRRQTDEVAALRVFN-WASKQPNF----VPSSSVYEEILRKLGKAGSF 113

Query: 116 DKAKELLLQMK------------------------------------DKNIKPNVVTYTS 139
           +  + +L +MK                                    +  IKP+   Y  
Sbjct: 114 EYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNV 173

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++     A      +     M+ + ++ +V TFN+++  LCK  ++  A  +++ M  +G
Sbjct: 174 LLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYG 233

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD  T+ T++ G+   G ++ A  +   M   GC  T  + ++LING+CK   I+ AL
Sbjct: 234 LSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQAL 293

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           S   E +S+G +PD   +NTL  GL +I   + A ++ D M   G+  D +TY + I GL
Sbjct: 294 SFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGL 353

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I EAV++   +    C  +   YN++I  LCK  R++ A E+ R L    ++P+V
Sbjct: 354 CKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDV 413

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            T++ +I GLC       A DLF +M+     P+  T++MLI       +  + + LL +
Sbjct: 414 CTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 473

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           M+      +  I + ++D   KN+
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNK 497


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  267 bits (682), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 153/454 (33%), Positives = 235/454 (51%), Gaps = 18/454 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  TF++LI G C   ++ EA  L+ ++    C  D  + + L+ GLCR      A  L
Sbjct: 114 PDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYEL 173

Query: 81  FEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           F+EM    +G +    +P+ VTYT +IDG CK G ++KA ++L  M+ +   PNVVTY+S
Sbjct: 174 FQEMEMREDGAW----KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSS 229

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G C A D ++A  LF  M  +G  PNVVT+  ++  LC   K+D A  L+D M    
Sbjct: 230 LLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC 289

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
              D  +YN LLDG+C  GR+  AK+LF  M +  C     +Y+ L+ G+C    +E A 
Sbjct: 290 CPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEAR 349

Query: 260 SLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            L   M  + GI PDVV ++ +  G     +   A +   EM    VA +  TY + IDG
Sbjct: 350 FLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDG 409

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G +  A+E+   +     + D+  Y  +I+GLC + R E AL L   +    + P+
Sbjct: 410 LCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPS 465

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V T++ +IG LC  G MD+A  L + M  + + P ++T+  L+ GF R        EL  
Sbjct: 466 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 525

Query: 439 KMKE--------INVMPDASIVSIVVDLLAKNEI 464
            M+          N++P+ +  +++  L    EI
Sbjct: 526 VMRRKAKKSSSAANLVPEQAFSALIRGLCKAREI 559



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 242/455 (53%), Gaps = 14/455 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            P+  T+  ++ GLC      +A  +  ++R      PD+ TY+T++NG C+      A 
Sbjct: 6   APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            +  EM   +G       P+ VTYT+++DGLC++G +D+A E++ +MK K ++P+  T++
Sbjct: 66  EILREMVTRDG-----MAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL---LDLM 195
           ++I G+C A+  +EA +L+ E++    + + V+ + ++  LC+  ++ EA  L   +++ 
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
                +PD  TY  L+DGFC +G +  A ++   ME   C   V +YS L++G CK  ++
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + AL L+  M SKG  P+VV + TL  GL   H+V+ A  L DEM      ADT +Y   
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           +DG C+ G I EA +LF  +    C  D   Y  L+ G C + RLE A  L  ++     
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360

Query: 376 V-PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + P+VVTYSI++ G     +  +A +   +M    V PN +T+  LI G  +    +  +
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM 420

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           E+L  + +    PD    +IV++ L   + +  +L
Sbjct: 421 EVLKNVDK----PDVVTYTIVIEGLCGTDRTEEAL 451



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/471 (31%), Positives = 238/471 (50%), Gaps = 23/471 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF---GCEPDVF 59
           +V     +   IL S    DAV+ ++LI GLC E RI EA  LF ++ +      +PDV 
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TYT L++G C++ +   A+ +   M       G  C PN VTY++++ GLCK G +D+A 
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVME------GRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L  +M  K   PNVVTYT++I G C A   + A+ L  EM       + V++N ++D  
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME-SMGCKHT 238
           C+ G+++EA +L   M      PD  TY  L+ GFC   R+  A+ L  +M+ + G    
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +YSI++ GY + K    A     EM+++ + P+ V +++L  GL +  +V  A     
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM---- 420

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           E+ +N    D  TY   I+GLC      EA+ L   +   + E  +  +NS+I  LC+ G
Sbjct: 421 EVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLG 480

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA--------V 410
            ++ A +L  ++    L P +VTY+ ++ G    G+M+ A +LF  M   A        +
Sbjct: 481 DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANL 540

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           VP    F  LIRG  +  E  K + ++ +++     P       +VD L +
Sbjct: 541 VPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 590



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/410 (31%), Positives = 216/410 (52%), Gaps = 20/410 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +LG +      P+ VT++SL+ GLC    + +A  LF ++   GC P+V TY
Sbjct: 203 GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTY 262

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++GLC       A  L +EM          C  +TV+Y  ++DG C+ G +++AK+L
Sbjct: 263 TTLIHGLCAAHKVDAARLLMDEMT------ATCCPADTVSYNALLDGYCRLGRIEEAKQL 316

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD--QGVQPNVVTFNVIMDEL 179
             +M  K+  P+ +TYT ++RGFC A    EA R  +E M    G+ P+VVT+++++   
Sbjct: 317 FKEMAAKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTAAGIDPDVVTYSIVVAGY 375

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            +  +  EA+  +  MI   V P+A TY++L+DG C  GRVNHA E+  +++    K  V
Sbjct: 376 SRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDV 431

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+I+I G C     E AL+L  EM++K ++P V   N++   L  +  ++ A+KL   
Sbjct: 432 VTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVA 491

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI-------RAYNSLID 352
           M  +G+     TY T ++G  + G +  A ELF  +R    +          +A+++LI 
Sbjct: 492 MAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIR 551

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           GLCK+  ++ A+ +   L      P       ++ GL   G+ ++A  L 
Sbjct: 552 GLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLI 601



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 170/319 (53%), Gaps = 32/319 (10%)

Query: 7   GFVVLGRI-----------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGC 54
           G+  LGRI            KSC  PD +T+T L++G C  SR+ EA  L   ++   G 
Sbjct: 303 GYCRLGRIEEAKQLFKEMAAKSCL-PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 361

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           +PDV TY+ +V G  R    + A    +EM   N        PN VTY+++IDGLCK G 
Sbjct: 362 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN------VAPNAVTYSSLIDGLCKAGR 415

Query: 115 VDKAKELLLQMKDKNI-KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
           V+ A E+L     KN+ KP+VVTYT VI G C      EA  L  EM+++ V+P+V TFN
Sbjct: 416 VNHAMEVL-----KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            ++  LC+ G MDEA +LL  M  HG+ P   TY TLL+GF  TGR+  A ELF  M   
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530

Query: 234 GCKHTVF-------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
             K +         ++S LI G CK +EI+ A+++  E+ S+  +P       +  GL  
Sbjct: 531 AKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 590

Query: 287 IHQVERAFKLFDEMQRNGV 305
             + E A KL + + + G+
Sbjct: 591 AGRTEEAGKLINSISKVGL 609



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 5/144 (3%)

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC-EFDIRAYNSLIDGLCKSGRL 360
           R  VA +  TY   ++GLCK     +A E+   +R  K    D+  Y+++I+G CK G +
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 361 EIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           + A E+ R +     + P+VVTY+ ++ GLC DG+MD+A ++  +M+   V P+  TF  
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 420 LIRGFIRINEPSKVIELLHKMKEI 443
           LI G+       KV E L   KEI
Sbjct: 122 LITGWC---NARKVDEALKLYKEI 142


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 255/484 (52%), Gaps = 33/484 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VTF S +  LC   R  +A  +F  +   G  PD+ +Y+ L++G           NL
Sbjct: 367 PGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNL 426

Query: 81  FEEMAN---------------GNGEFGVVCE--------------PNTVTYTTIIDGLCK 111
           F  MA+                + + G++ E              P+ VTY+T+I   C+
Sbjct: 427 FHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCR 486

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-QPNVV 170
            G +  A E   QM    ++PN V Y S+I GFC   D  +AK L  EMM +G+ +PN+V
Sbjct: 487 MGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIV 546

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            F+ I+  LC  G++ +A  + +L+I  G RP   T+N+L+DG+CL G++  A  +  +M
Sbjct: 547 FFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM 606

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G +  V +Y+ L++GYCK+ +I+  L L+ EML K +KP  V ++ +  GLF   + 
Sbjct: 607 VSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRT 666

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A K+F EM  +G A D  TY+  + GLC+N    EA+ LFH L  + C+FDI   N++
Sbjct: 667 SAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTV 726

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I+ L K  R E A +LF ++    LVPNV TY +MI  L  +G +++A  +F  ME++  
Sbjct: 727 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGC 786

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA---KNEISLN 467
            P+    + +IR  ++  +  K    + K+    +  +AS  S+++ L +   K+   + 
Sbjct: 787 APSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIK 846

Query: 468 SLPS 471
            LP+
Sbjct: 847 FLPA 850



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 257/502 (51%), Gaps = 44/502 (8%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPDVFTYTTLVN 66
           V+L R+      P+A+++ ++IK LC +SR  EA  +  ++   G  C PDV ++ T+++
Sbjct: 213 VLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIH 272

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G  +      A NL  EM     + GV  EP+ VTY +I+D LCK   +DKA+ +L QM 
Sbjct: 273 GFFKQGEVSKACNLINEMV----QKGV--EPDVVTYNSIVDALCKARAMDKAELVLRQMV 326

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           DK ++P+ +TYT++I G+  +  W E+ ++F +M  +G+ P +VTFN  M  LCK+G+  
Sbjct: 327 DKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSK 386

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A  +   M   G  PD  +Y+ LL G+   GR      LF SM   G       ++ILI
Sbjct: 387 DAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILI 446

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           + + K   ++ A+ +++EM  +G++PDVV ++TL      + ++  A + F +M   G+ 
Sbjct: 447 SAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLE 506

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVEL--------------------FHTL----RILKCE- 341
            +T  Y + I G C +G +V+A EL                     H+L    R++    
Sbjct: 507 PNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHD 566

Query: 342 -FD----------IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
            F+          I  +NSLIDG C  G++E A  +  ++    + P+VVTY+ ++ G C
Sbjct: 567 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYC 626

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             G++D    LF +M    V P  +T+ +++ G       S   ++ H+M +     D  
Sbjct: 627 KSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDID 686

Query: 451 IVSIVVDLLAKNEISLNSLPSF 472
              I++  L +N+++  ++  F
Sbjct: 687 TYKILLKGLCRNDLTDEAITLF 708



 Score =  240 bits (613), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 147/470 (31%), Positives = 247/470 (52%), Gaps = 19/470 (4%)

Query: 4   VSHGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-F 52
           V HGF   G + K+C            PD VT+ S++  LC ++R M+ A L  +  V  
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALC-KARAMDKAELVLRQMVDK 328

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G EPD  TYT +++G   + H   +  +F +M +     G++  P  VT+ + +  LCK 
Sbjct: 329 GVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSK----GLI--PGIVTFNSFMSSLCKH 382

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G    A+E+   M  K   P++V+Y+ ++ G+     + +   LF  M D+G+  N   F
Sbjct: 383 GRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCF 442

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N+++    K G MDEA  +   M   GVRPD  TY+TL+  FC  GR+  A E F  M S
Sbjct: 443 NILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMIS 502

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIHNTLFVGLFEIHQVE 291
           +G +     Y  LI+G+C + ++  A  L SEM+SKGI +P++V  +++   L    +V 
Sbjct: 503 IGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVM 562

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A  +F+ +   G      T+ + IDG C  G + +A  +   +  +  E D+  YN+L+
Sbjct: 563 DAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLV 622

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            G CKSG+++  L LFR +    + P  VTYSI++ GL + G+   A+ +F +M ++   
Sbjct: 623 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTA 682

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++ T+ +L++G  R +   + I L HK+  ++   D +I++ V++ L K
Sbjct: 683 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYK 732



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 164/329 (49%), Gaps = 7/329 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVF 59
           MGR++       +++     P+ V + SLI G C    +++A  L +++   G   P++ 
Sbjct: 487 MGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIV 546

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            ++++++ LC     + A ++F      N    +   P  VT+ ++IDG C  G ++KA 
Sbjct: 547 FFSSIIHSLCNEGRVMDAHDVF------NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 600

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +L  M    I+P+VVTY +++ G+C +   ++   LF EM+ + V+P  VT+++++D L
Sbjct: 601 GVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGL 660

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
              G+   A ++   MI  G   D  TY  LL G C     + A  LF  + +M CK  +
Sbjct: 661 FHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDI 720

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
              + +IN   K +  E A  L++ + + G+ P+V  +  +   L +   VE A  +F  
Sbjct: 721 TILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSS 780

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           M+++G A  +      I  L + G IV+A
Sbjct: 781 MEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 161/332 (48%), Gaps = 3/332 (0%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA-SRL 191
           +V TY  ++   C A+  +     F  ++  G++   +  N  +  LC   + DEA   L
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYSILINGY 249
           L  M   G  P+A +YNT++   C   R   A ++   M   G  C   V S++ +I+G+
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  E+  A +L +EM+ KG++PDVV +N++   L +   +++A  +  +M   GV  D 
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I G   +G+  E+ ++F  +        I  +NS +  LCK GR + A E+F+ 
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +     +P++V+YSI++ G   +G+     +LF  M +  +V N   F++LI    +   
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             + + +  +M+   V PD    S ++    +
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCR 486



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 150/314 (47%), Gaps = 3/314 (0%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           +V T+ ++MD  C+  + D        +++ G+R      NT L   C   R + A ++ 
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214

Query: 228 V-SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--PDVVIHNTLFVGL 284
           +  M  +GC     SY+ +I   C +   + AL +   M  +G +  PDVV  NT+  G 
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
           F+  +V +A  L +EM + GV  D  TY + +D LCK   + +A  +   +     E D 
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y ++I G   SG  + + ++FR +    L+P +VT++  +  LC  G+   A ++F  
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M     +P+++++ +L+ G+      + +  L H M +  ++ +    +I++   AK  +
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454

Query: 465 SLNSLPSFTVHEQQ 478
              ++  FT  + Q
Sbjct: 455 MDEAMLVFTEMQGQ 468


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/460 (33%), Positives = 235/460 (51%), Gaps = 18/460 (3%)

Query: 7   GFVVLGRI-----------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           GF   GRI           L+  F PD  TF  L+ GL     +  A  +   +   G +
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PD++TY +L++GLC+      A+ +  +M   +      C PNTVTY TII  LCKE  V
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD------CSPNTVTYNTIISTLCKENQV 387

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           ++A +L L +  K I P+V TY S+I+G C +++   A  L+ EM  +G  P+  T+N++
Sbjct: 388 EEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNML 447

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D LC  GK+ EA  LL  M   G   +  TYNTL+DGFC   R+  A+E+F  ME  G 
Sbjct: 448 IDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGV 507

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                +Y+ LI+G CK++ +E A  L  +M+ +G++PD   +N+L     +   +++A  
Sbjct: 508 SRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAAD 567

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +   M  +G   D  TY T I GLCK G +  A +L  T+++        AYN +I  L 
Sbjct: 568 IVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALF 627

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN-DGQMDKARDLFLDMEENAVVPNV 414
           +  R + A+ LFR +      P+ VTY I+  GLC   G + +A D  ++M E   VP  
Sbjct: 628 RRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEF 687

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
            +F ML  G   +     +I+L+  + E     D  +  I
Sbjct: 688 SSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEVTMI 727



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 234/470 (49%), Gaps = 40/470 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL------------ 68
           PD  TF  LIK LC   +I  A  L  ++  FG  PD  T+TT++ G             
Sbjct: 193 PDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRV 252

Query: 69  -----------------------CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
                                  C+      AL   EEM+   G F     P+  T+  +
Sbjct: 253 KEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFF-----PDKYTFNML 307

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           ++GL K G V  A E++  M  +   P++ TY S+I G C   + +EA ++  +M+++  
Sbjct: 308 VNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDC 367

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN VT+N I+  LCK  +++EA++L  ++   G+ PD  TYN+L+ G CL+     A E
Sbjct: 368 SPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAME 427

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L+  M++ GC    F+Y++LI+  C   +++ AL+L  EM   G   +V+ +NTL  G  
Sbjct: 428 LYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFC 487

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +  ++  A ++FD+M+  GV+ ++ TY T IDGLCK+  + EA +L   + +     D  
Sbjct: 488 KNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKF 547

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YNSL+   CK+G ++ A ++ +++      P++VTY  +I GLC  G+++ A  L   +
Sbjct: 548 TYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTI 607

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           +   +      ++ +I+   R     + + L  +M E    PDA    IV
Sbjct: 608 QMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIV 657



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/332 (37%), Positives = 184/332 (55%), Gaps = 7/332 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V     VL ++++   +P+ VT+ ++I  LC E+++ EA  L   L   G  PDV T
Sbjct: 349 LGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCT 408

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+ GLC + +  VA+ L++EM          C P+  TY  +ID LC  G + +A  
Sbjct: 409 YNSLIQGLCLSRNHTVAMELYKEMKTKG------CHPDEFTYNMLIDSLCFRGKLQEALN 462

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M+      NV+TY ++I GFC  K   EA+ +F +M  QGV  N VT+N ++D LC
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+ +++EAS+L+D MI  G+RPD FTYN+LL  FC  G +  A ++  +M S GC+  + 
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIV 582

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI G CK   +E A  L   +  KGI      +N +   LF   + + A +LF EM
Sbjct: 583 TYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREM 642

Query: 301 QRNGVAADTWTYRTFIDGLCK-NGYIVEAVEL 331
                A D  TY+    GLC+  G I EAV+ 
Sbjct: 643 IEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDF 674



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 203/397 (51%), Gaps = 7/397 (1%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  PDV T+  L+  LCR      A+ L EEM +    FG++  P+  T+TTI+ G  +E
Sbjct: 190 GIRPDVSTFNILIKALCRAHQIRPAILLMEEMED----FGLL--PDEKTFTTIMQGFIEE 243

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM-MDQGVQPNVVT 171
           G +D A  +  QM +       VT   ++ GFC      EA R   EM + +G  P+  T
Sbjct: 244 GNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYT 303

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           FN++++ L K G +  A  ++D+M++ G  PD +TYN+L+ G C  G V+ A ++   M 
Sbjct: 304 FNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMI 363

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
              C     +Y+ +I+  CK  ++E A  L   +  KGI PDV  +N+L  GL       
Sbjct: 364 ERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHT 423

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +L+ EM+  G   D +TY   ID LC  G + EA+ L   + +  C  ++  YN+LI
Sbjct: 424 VAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLI 483

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG CK+ R+  A E+F  +    +  N VTY+ +I GLC   ++++A  L   M    + 
Sbjct: 484 DGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLR 543

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           P+  T++ L+  F +  +  K  +++  M      PD
Sbjct: 544 PDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPD 580



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 197/383 (51%), Gaps = 19/383 (4%)

Query: 90  EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-----IKPNVVTYTSVIRGF 144
           EFGVV   NT  Y  +++ L     VD  K  L+++   N     I+P+V T+  +I+  
Sbjct: 153 EFGVVA--NTHFYNFLLNVL-----VDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKAL 205

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A     A  L  EM D G+ P+  TF  IM    + G +D A R+ + M++ G     
Sbjct: 206 CRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTN 265

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF----SYSILINGYCKNKEIEGALS 260
            T N L++GFC  GR+  A      +E M  +   F    ++++L+NG  K   ++ AL 
Sbjct: 266 VTVNVLVNGFCKEGRIEEALRF---IEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALE 322

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +   ML +G  PD+  +N+L  GL ++ +V+ A K+ ++M     + +T TY T I  LC
Sbjct: 323 VMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLC 382

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + EA +L   L       D+  YNSLI GLC S    +A+EL++ +      P+  
Sbjct: 383 KENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEF 442

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+++I  LC  G++ +A +L  +ME +    NVIT++ LI GF +    ++  E+  +M
Sbjct: 443 TYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM 502

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
           +   V  ++   + ++D L K+E
Sbjct: 503 ELQGVSRNSVTYNTLIDGLCKSE 525


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/448 (33%), Positives = 233/448 (52%), Gaps = 19/448 (4%)

Query: 4   VSHGFVVLGRILKSC-----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF 52
           + HGF   GR+  +            F PD  TF +L+ GLC    +  A  +   +   
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G +PDV+TY ++++GLC+      A+ + ++M   +      C PNTVTY T+I  LCKE
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------CSPNTVTYNTLISTLCKE 378

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
             V++A EL   +  K I P+V T+ S+I+G C  ++   A  LF EM  +G +P+  T+
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N+++D LC  GK+DEA  +L  M   G      TYNTL+DGFC   +   A+E+F  ME 
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G      +Y+ LI+G CK++ +E A  L  +M+ +G KPD   +N+L         +++
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  +   M  NG   D  TY T I GLCK G +  A +L  ++++        AYN +I 
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618

Query: 353 GLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCN-DGQMDKARDLFLDMEENAV 410
           GL +  +   A+ LFR  L      P+ V+Y I+  GLCN  G + +A D  +++ E   
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLH 438
           VP   +  ML  G + ++    +++L++
Sbjct: 679 VPEFSSLYMLAEGLLTLSMEETLVKLVN 706



 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 139/438 (31%), Positives = 237/438 (54%), Gaps = 6/438 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             PD  TFT++++G   E  +  A  +  ++  FGC     +   +V+G C+      AL
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           N  +EM+N +G F     P+  T+ T+++GLCK G V  A E++  M  +   P+V TY 
Sbjct: 280 NFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           SVI G C   +  EA  +  +M+ +   PN VT+N ++  LCK  +++EA+ L  ++   
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  T+N+L+ G CLT     A ELF  M S GC+   F+Y++LI+  C   +++ A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L++  +M   G    V+ +NTL  G  + ++   A ++FDEM+ +GV+ ++ TY T IDG
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK+  + +A +L   + +   + D   YNSL+   C+ G ++ A ++ +++      P+
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +VTY  +I GLC  G+++ A  L   ++   +      ++ +I+G  R  + ++ I L  
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFR 634

Query: 439 KMKEIN-VMPDASIVSIV 455
           +M E N   PDA    IV
Sbjct: 635 EMLEQNEAPPDAVSYRIV 652



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 209/416 (50%), Gaps = 7/416 (1%)

Query: 47  TKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTII 106
            K+ V+G +PDV T+  L+  LCR      A+ + E+M +    +G+V  P+  T+TT++
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS----YGLV--PDEKTFTTVM 231

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GV 165
            G  +EG +D A  +  QM +     + V+   ++ GFC      +A     EM +Q G 
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            P+  TFN +++ LCK G +  A  ++D+M+Q G  PD +TYN+++ G C  G V  A E
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +   M +  C     +Y+ LI+  CK  ++E A  L   + SKGI PDV   N+L  GL 
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                  A +LF+EM+  G   D +TY   ID LC  G + EA+ +   + +  C   + 
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YN+LIDG CK+ +   A E+F  +    +  N VTY+ +I GLC   +++ A  L   M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                 P+  T++ L+  F R  +  K  +++  M      PD      ++  L K
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/334 (37%), Positives = 186/334 (55%), Gaps = 8/334 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V     VL +++    +P+ VT+ +LI  LC E+++ EA  L   L   G  PDV T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +L+ GLC T +  VA+ LFEEM +        CEP+  TY  +ID LC +G +D+A  
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKG------CEPDEFTYNMLIDSLCSKGKLDEALN 456

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L QM+      +V+TY ++I GFC A    EA+ +F EM   GV  N VT+N ++D LC
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+ ++++A++L+D MI  G +PD +TYN+LL  FC  G +  A ++  +M S GC+  + 
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI+G CK   +E A  L   +  KGI      +N +  GLF   +   A  LF EM
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636

Query: 301 -QRNGVAADTWTYRTFIDGLCK-NGYIVEAVELF 332
            ++N    D  +YR    GLC   G I EAV+  
Sbjct: 637 LEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 217/448 (48%), Gaps = 6/448 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K  F+P+   +  ++  L       +   +   ++   CE    T+  L+    +     
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
             L++ + M +   EFG+  +P+T  Y  +++ L     +   +    +M    IKP+V 
Sbjct: 136 EILSVVDWMID---EFGL--KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVS 190

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T+  +I+  C A     A  +  +M   G+ P+  TF  +M    + G +D A R+ + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM-GCKHTVFSYSILINGYCKNKE 254
           ++ G      + N ++ GFC  GRV  A      M +  G     ++++ L+NG CK   
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           ++ A+ +   ML +G  PDV  +N++  GL ++ +V+ A ++ D+M     + +T TY T
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I  LCK   + EA EL   L       D+  +NSLI GLC +    +A+ELF  +    
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             P+  TY+++I  LC+ G++D+A ++   ME +    +VIT++ LI GF + N+  +  
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
           E+  +M+   V  ++   + ++D L K+
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKS 518


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/451 (33%), Positives = 249/451 (55%), Gaps = 22/451 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++       G++ K  F P  VTF +L+ GLC E R+ EA  LF ++    C+P+V T+T
Sbjct: 30  KLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFT 85

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NGLCR    + A+ L + M     E G+  +PN +TY TI+DG+CK G    A  LL
Sbjct: 86  TLMNGLCREGRVVEAVALLDRMV----EDGL--QPNQITYGTIVDGMCKMGDTVSALNLL 139

Query: 123 LQMKD-KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            +M++  +IKP+VV Y+++I G        +A+ LFIEM D+G+ P++VT++ +++  C 
Sbjct: 140 RKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCS 199

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +GK  EA RLL  M+   + PD  T++ L++     G +N A++L   M S G    V +
Sbjct: 200 SGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVT 259

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSK-----------GIKPDVVIHNTLFVGLFEIHQV 290
            + L++G C + +++ AL ++  M              G++PDV  +N L  GL    + 
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L++EM   G+  DT TY + I+GLCK   + EA ++F ++       +I  +N+L
Sbjct: 320 LEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTL 379

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I G CK+G ++  LELF  +    +V N +TY  +I G    G ++ + D+F +M  + V
Sbjct: 380 ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
            P+ IT   ++ G     E  K + +L +++
Sbjct: 440 YPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/456 (33%), Positives = 246/456 (53%), Gaps = 23/456 (5%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +F  LIK  C+ S++  A + F KL   G  P + T+ TL++GLC       AL+LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M          C+PN VT+TT+++GLC+EG V +A  LL +M +  ++PN +TY +++
Sbjct: 74  HQM----------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 142 RGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
            G C   D   A  L  +M +   ++P+VV ++ I+D L K+G+  +A  L   M   G+
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY+ +++GFC +G+ + A+ L   M        V ++S LIN   K  ++  A  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR-----------NGVAADT 309
           L  EM+S G+ P+VV  NTL  GL +  +++ A ++F  MQ+           NGV  D 
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I GL   G  +EA EL+  +       D   Y+S+I+GLCK  RL+ A ++F S
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +      PN+VT++ +I G C  G +D   +LF +M    +V N IT+  LIRGF ++  
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423

Query: 430 PSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEI 464
            +  +++  +M    V PD  +I +++  L +K E+
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 459



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 191/381 (50%), Gaps = 18/381 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFT 60
           GRV     +L R+++    P+ +T+ +++ G+C     + A  L  K+      +PDV  
Sbjct: 95  GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVI 154

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GL +      A NLF EM +  G F     P+ VTY+ +I+G C  G   +A+ 
Sbjct: 155 YSAIIDGLWKDGRHTDAQNLFIEMQD-KGIF-----PDIVTYSCMINGFCSSGKWSEAQR 208

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  + I P+VVT++ +I       D N A+ L  EM+  GV PNVVT N ++D LC
Sbjct: 209 LLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLC 268

Query: 181 KNGKMDEA--------SRLLDLMIQH---GVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
            +GK+ +A          ++D+   H   GV PD  TYN L+ G    G+   A+EL+  
Sbjct: 269 DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 328

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G      +YS +ING CK   ++ A  ++  M SK   P++V  NTL  G  +   
Sbjct: 329 MPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGM 388

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V+   +LF EM R G+ A+  TY T I G  K G I  ++++F  +       D     +
Sbjct: 389 VDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRN 448

Query: 350 LIDGLCKSGRLEIALELFRSL 370
           ++ GL     L+ AL +   L
Sbjct: 449 MLTGLWSKEELKKALAMLEEL 469



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 174/332 (52%), Gaps = 17/332 (5%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           S   PD V ++++I GL  + R  +A  LF +++  G  PD+ TY+ ++NG C +     
Sbjct: 146 SHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSE 205

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A  L +EM            P+ VT++ +I+ L KEG ++ A++LL +M    + PNVVT
Sbjct: 206 AQRLLQEMLVRK------ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVT 259

Query: 137 YTSVIRGFCYAKDWNEAKRLFI----EMMD-------QGVQPNVVTFNVIMDELCKNGKM 185
             +++ G C +    +A  +F      MMD        GV+P+V T+N+++  L   GK 
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
            EA  L + M   G+ PD  TY+++++G C   R++ A ++F SM S      + +++ L
Sbjct: 320 LEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTL 379

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I GYCK   ++  L L+ EM  +GI  + + + TL  G  ++  +  +  +F EM  +GV
Sbjct: 380 ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             DT T R  + GL     + +A+ +   L++
Sbjct: 440 YPDTITIRNMLTGLWSKEELKKALAMLEELQM 471



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 147/286 (51%), Gaps = 7/286 (2%)

Query: 196 IQHGVR-P-DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
           I+HG++ P D +++N L+  FC   ++  A   F  +  +G   T+ +++ L++G C   
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            +  AL L+ +M     KP+VV   TL  GL    +V  A  L D M  +G+  +  TY 
Sbjct: 65  RVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
           T +DG+CK G  V A+ L   +  L   + D+  Y+++IDGL K GR   A  LF  +  
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + P++VTYS MI G C+ G+  +A+ L  +M    + P+V+TF  LI   ++  + + 
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
             +LL +M    V P+    + ++D L  +    ++L  F   ++ 
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 253/484 (52%), Gaps = 33/484 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTF+S +  LC   R  +A  +F  +   G  PD+ +Y+ L++G           NL
Sbjct: 335 PDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNL 394

Query: 81  FEEMAN---------------GNGEFGVVCE--------------PNTVTYTTIIDGLCK 111
           F  MA+                + + G++ E              PN VTY+T+I   C+
Sbjct: 395 FHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCR 454

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-QPNVV 170
            G +  A E   QM    I+PN   Y S+I GFC   D  +AK    EMM +G+ +PN+V
Sbjct: 455 MGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIV 514

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            F+ I+  LC  G++ +A  + +L+I  G RP   T+N+L+DG+CL G++  A  +  +M
Sbjct: 515 FFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM 574

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S+G +  V + + L++GYCK+ +I+  L L+ EML K +KP  V +N +  GL    + 
Sbjct: 575 VSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRT 634

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A K+F EM  +G A D  TY+  + GLC+N    EA+ LFH L  + C+FDI   N++
Sbjct: 635 SAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTM 694

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I+ L K  R E A +LF ++    LVPNV TY +MI  L  +G +++A  +F  ME++  
Sbjct: 695 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGC 754

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA---KNEISLN 467
            P+    + +IR  ++  +  K    + K+    +  +AS  S+++ L +   K+   + 
Sbjct: 755 APSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIK 814

Query: 468 SLPS 471
            LP+
Sbjct: 815 FLPA 818



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 259/502 (51%), Gaps = 44/502 (8%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPDVFTYTTLVN 66
           V+L R+ +    PDA+++ ++IK LC +SR  EA  +  ++   G  C PDV ++ T+++
Sbjct: 181 VLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIH 240

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G  +      A NLF EM     + GVV  P+  TY +I+D LCK   +DKA+ +L QM 
Sbjct: 241 GFFKQGEVSKACNLFNEMV----QKGVV--PDVGTYNSIVDALCKARAMDKAEFVLRQMV 294

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           DK ++P+ VTY ++I G+  +  W E+ ++F +M  +G+ P+ VTF+  M  LCK+G+  
Sbjct: 295 DKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSK 354

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A  +   M   G  PD  +Y+ LL G+   GR      LF SM   G        +ILI
Sbjct: 355 DAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           + + K   ++ A+ +++EM  +G++P+VV ++TL      + ++  A + F +M   G+ 
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVE--------------------LFHTL----RILKCE- 341
            +T  Y + I G C +G +V+A E                    + H+L    R++  + 
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQD 534

Query: 342 -FD----------IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
            F+          I  +NSLIDG C  G++E A  +  ++    + P+VVT + ++ G C
Sbjct: 535 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYC 594

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             G++D    LF +M    V P  +T+++++ G +R    S   ++ H+M +     D  
Sbjct: 595 KSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDID 654

Query: 451 IVSIVVDLLAKNEISLNSLPSF 472
              I++  L +N+++  ++  F
Sbjct: 655 TYKILLKGLCRNDLTDEAITLF 676



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 225/448 (50%), Gaps = 6/448 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R   G   + R+L++      +  T+ +K LC   R  EA   L  ++    C PD  +Y
Sbjct: 139 RPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISY 198

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++  LC  S +  AL++ + MA   G     C P+ V++ T+I G  K+G V KA  L
Sbjct: 199 NTVIKSLCGDSRSQEALDMVQRMAKEGGR----CSPDVVSFNTVIHGFFKQGEVSKACNL 254

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K + P+V TY S++   C A+  ++A+ +  +M+D+GV+P+ VT+N I+     
Sbjct: 255 FNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSC 314

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G   E++++   M   G+ PD  T+++ +   C  GR   A+E+F  M + G    + S
Sbjct: 315 SGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVS 374

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL++GY          +L+  M  KGI  +    N L     +   ++ A  +F EMQ
Sbjct: 375 YSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQ 434

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  +  TY T I   C+ G + +A+E F  +  +  E +   Y+SLI G C  G L 
Sbjct: 435 GQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLV 494

Query: 362 IALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A E    +   G+  PN+V +S +I  LC +G++  A+D+F  +      P ++TF+ L
Sbjct: 495 KAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSL 554

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD 448
           I G+  + +  K   +L  M  + + PD
Sbjct: 555 IDGYCLVGKMEKAFGVLDAMVSVGIEPD 582



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 243/470 (51%), Gaps = 19/470 (4%)

Query: 4   VSHGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-F 52
           V HGF   G + K+C            PD  T+ S++  LC ++R M+ A    +  V  
Sbjct: 238 VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALC-KARAMDKAEFVLRQMVDK 296

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G EPD  TY  +++G   + H   +  +F +M +     G++  P+TVT+++ +  LCK 
Sbjct: 297 GVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSK----GLI--PDTVTFSSFMSSLCKH 350

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G    A+E+   M  K   P++V+Y+ ++ G+     + +   LF  M D+G+  N    
Sbjct: 351 GRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCI 410

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N+++    K G MDEA  +   M   GVRP+  TY+TL+  FC  GR+  A E F  M S
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMIS 470

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIHNTLFVGLFEIHQVE 291
           +G +     Y  LI+G+C + ++  A    SEM+SKG+ +P++V  +++   L    +V 
Sbjct: 471 IGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVM 530

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A  +F+ +   G      T+ + IDG C  G + +A  +   +  +  E D+   N+L+
Sbjct: 531 DAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            G CKSG+++  L LFR +    + P  VTY+I++ GL   G+   A+ +F +M ++   
Sbjct: 591 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTA 650

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++ T+ +L++G  R +   + I L HK+  ++   D +I++ +++ L K
Sbjct: 651 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYK 700



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 162/329 (49%), Gaps = 7/329 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE-PDVF 59
           MGR++       +++     P+   + SLI G C    +++A    +++   G   P++ 
Sbjct: 455 MGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIV 514

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            ++++++ LC     + A ++F      N    +   P  VT+ ++IDG C  G ++KA 
Sbjct: 515 FFSSIIHSLCIEGRVMDAQDVF------NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 568

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +L  M    I+P+VVT  +++ G+C +   ++   LF EM+ + V+P  VT+N+++D L
Sbjct: 569 GVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGL 628

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            + G+   A ++   MI  G   D  TY  LL G C     + A  LF  + +M CK  +
Sbjct: 629 LRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDI 688

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
              + +IN   K +  E A  L++ + + G+ P+V  +  +   L +   VE A  +F  
Sbjct: 689 TILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSS 748

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           M+++G A  +      I  L + G IV+A
Sbjct: 749 MEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 151/314 (48%), Gaps = 3/314 (0%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
            V T+ ++MD  C+  + D     +  +++ G++       T L   C   R + A ++ 
Sbjct: 123 TVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL 182

Query: 228 V-SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--PDVVIHNTLFVGL 284
           +  M  + C     SY+ +I   C +   + AL +   M  +G +  PDVV  NT+  G 
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
           F+  +V +A  LF+EM + GV  D  TY + +D LCK   + +A  +   +     E D 
Sbjct: 243 FKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDG 302

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN++I G   SG  + + ++FR +    L+P+ VT+S  +  LC  G+   A ++F  
Sbjct: 303 VTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQY 362

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M     +P+++++ +L+ G+      + +  L H M +  ++ +   ++I++   AK  +
Sbjct: 363 MTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGM 422

Query: 465 SLNSLPSFTVHEQQ 478
              ++  FT  + Q
Sbjct: 423 MDEAMLVFTEMQGQ 436


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 164/500 (32%), Positives = 260/500 (52%), Gaps = 31/500 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +  ++ +    PD VT+ +L+  LC   R MEA  +F  +   G +PD   Y
Sbjct: 255 GKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIY 314

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA-NGN--------------GEFGVVCE---------- 96
            TL++G     + +    L + M  NG                + G+V E          
Sbjct: 315 GTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQ 374

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN VTY T++D LC+ G VD A     ++  + + PN V + ++I G C    W++
Sbjct: 375 QGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDK 434

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+ L +EM+ +G+ PN + FN +++ LCK G +  A  + DLM++  V+ D  TY TL+D
Sbjct: 435 AEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLID 494

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+CL G+V+ A +L   M   G K    +Y+ +INGYCKN  IE A SL+ +M SKG+ P
Sbjct: 495 GYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNP 554

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
            +VI++T+  GLF+  ++  A +L+  M + G+     TY   + GLC+N    +A+ +F
Sbjct: 555 GIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMF 614

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
           H L ++      R +N +ID L K GR + A +LF SL    LVPNVVTY +M+  L   
Sbjct: 615 HNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQ 674

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G +++  DLFL +E+N    +    + L+    +  E  K    L K+ E N   +AS  
Sbjct: 675 GLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTA 734

Query: 453 SIVVDLLA--KNEISLNSLP 470
             +V L++  K +  +NS+P
Sbjct: 735 ESLVFLVSSGKYDQHINSIP 754



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 260/507 (51%), Gaps = 38/507 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           G +   F  LGR++++ +T  A+TF+ L+KGLC + R  +A  +   ++   GC P+ F+
Sbjct: 110 GHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFS 169

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC  + +  AL+L   M   +   G  C P+ V+YTT+I+GL +EG +DKA  
Sbjct: 170 YNILLKGLCDENRSQQALHLLHTMMADDTRGG--CPPDVVSYTTVINGLLREGQLDKAYC 227

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M D+ + PN +TY  ++ G+C +    EA  +F +M   GV+P+VVT+N +M  LC
Sbjct: 228 LFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLC 287

Query: 181 KNGKMDEASR-----------------------------------LLDLMIQHGVRPDAF 205
           KNG+  EA +                                   LLD+M+++G +PD +
Sbjct: 288 KNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHY 347

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            +N L+  +   G V+ A   F  M   G    + +Y  +++  C+  +++ A+S +  +
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           +S+G+ P+ V+  TL  GL    + ++A +L  EM   G+  +T  + T ++ LCK G +
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A  +F  +  +  + D+  Y +LIDG C  G+++ A +L   +    + PN VTY+ +
Sbjct: 468 TRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI 527

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G C +G+++ A  LF  M    V P ++ +  ++ G  +    +   EL   M +  +
Sbjct: 528 INGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGI 587

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSF 472
                  +I++  L +N  + ++L  F
Sbjct: 588 KLPIGTYNIILQGLCQNNCTDDALRMF 614



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 197/409 (48%), Gaps = 16/409 (3%)

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           +F   + ++ + R S   VAL+LF  M   +     +C     TY+ +I    + G +D 
Sbjct: 66  IFDLNSALSAVARES-PAVALSLFNRMPRAD-----LC-----TYSIVIGCCSRAGHLDL 114

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIM 176
           A   L ++         +T++ +++G C+ K  ++A  + +  M   G  PN  ++N+++
Sbjct: 115 AFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILL 174

Query: 177 DELCKNGKMDEASRLLDLMI----QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
             LC   +  +A  LL  M+    + G  PD  +Y T+++G    G+++ A  LF  M  
Sbjct: 175 KGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLD 234

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G      +Y+ L++GYC + + + A+ ++ +M   G++PDVV +NTL V L +  +   
Sbjct: 235 QGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSME 294

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A K+FD M + G   D+  Y T + G    GY+V+  +L   +     + D   +N LI 
Sbjct: 295 ARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIG 354

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
              K G ++ A+  F  +    L PN+VTY  ++  LC  G++D A   F  +    + P
Sbjct: 355 AYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTP 414

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           N + F  LI G    ++  K  EL  +M    + P+    + +++ L K
Sbjct: 415 NGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCK 463



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 166/328 (50%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V        R++    TP+ V F +LI GLCA  +  +A  L  ++   G  P+   
Sbjct: 394 VGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIF 453

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + TL+N LC+      A N+F+ M        V  + + +TYTT+IDG C +G VD+A +
Sbjct: 454 FNTLLNHLCKEGMVTRAKNIFDLMVR------VDVQCDVITYTTLIDGYCLDGKVDEATK 507

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M    +KPN VTY ++I G+C      +A  LF +M  +GV P +V ++ I+  L 
Sbjct: 508 LLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLF 567

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  ++  A  L   MI+ G++    TYN +L G C     + A  +F ++  +       
Sbjct: 568 QTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNR 627

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++I+I+   K    + A  L++ +L++G+ P+VV +  +   L E   +E    LF  +
Sbjct: 628 TFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSL 687

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           ++NG  AD+      +  L + G + +A
Sbjct: 688 EKNGCTADSRMLNALVGKLPQKGEVRKA 715



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 11/286 (3%)

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM---GCKHTVFSYSILINGYCKNKEIEG 257
           R D  TY+ ++ G C   R  H    F ++  +   G      ++S L+ G C +K    
Sbjct: 93  RADLCTYSIVI-GCC--SRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSD 149

Query: 258 ALSL-YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ----RNGVAADTWTY 312
           A+ +    M + G  P+   +N L  GL + ++ ++A  L   M     R G   D  +Y
Sbjct: 150 AMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSY 209

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I+GL + G + +A  LF  +       +   YN L+ G C SG+ + A+ +FR +  
Sbjct: 210 TTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCR 269

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + P+VVTY+ ++  LC +G+  +AR +F  M +    P+   +  L+ G+       +
Sbjct: 270 DGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQ 329

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           + +LL  M      PD  I +I++   AK+ +   ++ +F+   QQ
Sbjct: 330 MHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQ 375


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/500 (31%), Positives = 258/500 (51%), Gaps = 47/500 (9%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R++     P AV++T+L++ LCAE R  +A  L   ++  G  PDV TY TL+ GLC  +
Sbjct: 103 RVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAA 162

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ L  EM     E G+  EPN V Y+ ++ G CK G  +   ++  +M  + I+P
Sbjct: 163 DVDKAVELLREMC----ESGI--EPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEP 216

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +VV YT +I   C      +A ++  +MM++G++PNVVT+NV+++ +CK G + EA  L 
Sbjct: 217 DVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLR 276

Query: 193 DLMIQHGVRPDAFTYNTLL-------------------------------------DGFC 215
           + M++ GV  DA TYNTL+                                      G C
Sbjct: 277 NNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLC 336

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            TGR+  A ++   M   GC   + ++++LI G  +  +++ A+ L  EM S G++PD  
Sbjct: 337 KTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSF 396

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            ++ L  G  ++ QV+RA  L  +M+R+G+  +   Y   +  LC+ G + +A   F  +
Sbjct: 397 TYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM 456

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               C+ D+ AY+++I G C+    + A E  + +    L+P+ VTYS++I    N G +
Sbjct: 457 HK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDL 515

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
             A  +   M  +  VP+V  FD LI+G+    +  KV+EL+ +M   ++  D+ I+S +
Sbjct: 516 GAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575

Query: 456 VD-LLAKNEIS--LNSLPSF 472
              L+A NE    L S+P F
Sbjct: 576 YTCLVANNEGKALLQSVPGF 595



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 217/443 (48%), Gaps = 44/443 (9%)

Query: 57  DVFTYTTLVNGLCRTSHTI-VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           D  +Y T++  LCR    +  AL L   MA+          P  V+YTT++  LC E   
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHET-------RPTAVSYTTLMRALCAERRT 129

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            +A  LL  M+   ++P+VVTY ++IRG C A D ++A  L  EM + G++PNVV ++ +
Sbjct: 130 GQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCL 189

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +   CK G+ +  S++ + M   G+ PD   Y  L+D  C  G+V  A ++   M   G 
Sbjct: 190 LQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGL 249

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V +Y++LIN  CK   ++ A+SL + ML KG+  D V +NTL  GL  + +++ A  
Sbjct: 250 EPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMG 309

Query: 296 LFDEM--QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
           L +EM      V  +  T+ + I GLCK G + +A ++   +    C  ++  +N LI G
Sbjct: 310 LLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGG 369

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP- 412
           L +  +++ A+EL   +    L P+  TYSI+I G C   Q+D+A  L   M  + + P 
Sbjct: 370 LLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPE 429

Query: 413 ---------------------------------NVITFDMLIRGFIRINEPSKVIELLHK 439
                                            +V+ +  +I G  R+ +     E L  
Sbjct: 430 LVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKH 489

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M +  ++PD+   S+++++ A +
Sbjct: 490 MLDEGLIPDSVTYSMLINMFANS 512



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 161/337 (47%), Gaps = 11/337 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     V+ ++++    P+ VT+  LI  +C E  + EA +L   +   G   D  TY
Sbjct: 232 GKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTY 291

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GL        A+ L EEM +G      + EPN VT+ ++I GLCK G + +A ++
Sbjct: 292 NTLITGLSGVLEMDEAMGLLEEMIHGE----TMVEPNVVTFNSVIHGLCKTGRMRQAFQV 347

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M +     N+VT+  +I G        +A  L  EM   G++P+  T++++++  CK
Sbjct: 348 RDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCK 407

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++D A  LL  M + G+ P+   Y  LL   C  G +  A+  F  M    CK  V +
Sbjct: 408 MWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVA 466

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL---FVGLFEIHQVERAFKLFD 298
           YS +I+G C+ ++ + A      ML +G+ PD V ++ L   F    ++   ER  K   
Sbjct: 467 YSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLK--- 523

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           +M  +G   D   + + I G    G   + +EL   +
Sbjct: 524 QMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 7/262 (2%)

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A+  L ++++ G    +   N LL       R+    E    + S+       SY+ ++ 
Sbjct: 34  AAPFLAVLLRRGRAEASARLNRLL-------RLVPLPESPALLSSLPSVRDAVSYNTVLA 86

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
             C+      A      +++   +P  V + TL   L    +  +A  L  +MQ +GV  
Sbjct: 87  ALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRP 146

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D  TY T I GLC    + +AVEL   +     E ++  Y+ L+ G CK+GR E   ++F
Sbjct: 147 DVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVF 206

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    + P+VV Y+ +I  LC +G++ KA  +   M E  + PNV+T+++LI    + 
Sbjct: 207 EEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKE 266

Query: 428 NEPSKVIELLHKMKEINVMPDA 449
               + + L + M E  V  DA
Sbjct: 267 GSVKEAMSLRNNMLEKGVALDA 288


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/425 (34%), Positives = 229/425 (53%), Gaps = 7/425 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F PD VTF +L+ GLC    I +   +   +   G E DV+TY +L++GLC+      A+
Sbjct: 298 FCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAV 357

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            +   M + +      CEPNTVTY T+I  LCKE  V+ A EL   +  K + P+V T+ 
Sbjct: 358 EILHHMVSRD------CEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFN 411

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I+G C   +   A  LF EM ++G  P+  T++++++ LC   ++ EA  LL  M   
Sbjct: 412 SLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELS 471

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G   +   YNTL+DG C   RV  A+++F  ME +G   +  +Y+ LING CK+K +E A
Sbjct: 472 GCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEA 531

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L  +M+ +G+KPD   + T+     +   ++RA  +   M  NG   D  TY T I G
Sbjct: 532 AQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGG 591

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G +  A +L  ++++       +AYN +I  LCK  R + A+ LFR +      P+
Sbjct: 592 LCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPD 651

Query: 379 VVTYSIMIGGLCN-DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           V+TY I+  GLCN  G + +A D  ++M E  ++P   +F  L  G   ++    +I+L+
Sbjct: 652 VITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLI 711

Query: 438 HKMKE 442
           + + E
Sbjct: 712 NMVME 716



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/465 (32%), Positives = 236/465 (50%), Gaps = 46/465 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           PD  TFT+L++G   E+ + E A    +L V  GCE    +   LVNGLC+      AL 
Sbjct: 232 PDEKTFTTLMQGFIEEADV-EGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALR 290

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
              E      E G    P+ VT+  +++GLC+ G + +  E++  M +K  + +V TY S
Sbjct: 291 FIYE------EEGFC--PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNS 342

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C   + +EA  +   M+ +  +PN VT+N ++  LCK   ++ A+ L  ++   G
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKG 402

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V PD  T+N+L+ G CLT     A ELF  M+  GC    F+YSILI   C  + ++ AL
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  EM   G   +VV++NTL  GL + ++V  A  +FD+M+  GV+  + TY T I+GL
Sbjct: 463 MLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGL 522

Query: 320 CKNGYIVEAVEL-------------FHTLRILK----------------------CEFDI 344
           CK+  + EA +L             F    +LK                      CE DI
Sbjct: 523 CKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDI 582

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y +LI GLCK+GR+++A +L RS+    +V     Y+ +I  LC   +  +A  LF +
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFRE 642

Query: 405 MEENAVVPNVITFDMLIRGFIRINEP-SKVIELLHKMKEINVMPD 448
           M E    P+VIT+ ++ RG      P  + ++   +M E  ++P+
Sbjct: 643 MMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPE 687



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 236/504 (46%), Gaps = 51/504 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD   +   +  L   +++     L +K+      PDV T+  L+  LC+      A+ +
Sbjct: 162 PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILM 221

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E+M N    +G+   P+  T+TT++ G  +E  V+ A  +   M +   +   V+   +
Sbjct: 222 LEDMPN----YGL--RPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVL 275

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C      EA R   E  ++G  P+ VTFN +++ LC+ G + +   ++D M++ G 
Sbjct: 276 VNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGF 333

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D +TYN+L+ G C  G ++ A E+   M S  C+    +Y+ LI   CK   +E A  
Sbjct: 334 ELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATE 393

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT--------- 311
           L   + SKG+ PDV   N+L  GL      E A +LF+EM+  G   D +T         
Sbjct: 394 LARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLC 453

Query: 312 --------------------------YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                                     Y T IDGLCKN  + +A ++F  + +L       
Sbjct: 454 SERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSV 513

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YN+LI+GLCKS R+E A +L   +    L P+  TY+ M+   C  G + +A D+  +M
Sbjct: 514 TYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM 573

Query: 406 EENAVVPNVITFDMLIRGFI---RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             N   P+++T+  LI G     R++  SK++  + +MK + + P A   + V+  L K 
Sbjct: 574 TLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSV-QMKGMVLTPQA--YNPVIQALCKR 630

Query: 463 EISLNSLPSFTVHEQQEEVDESNV 486
           + +  ++  F   E  E+ D  +V
Sbjct: 631 KRTKEAMRLF--REMMEKGDPPDV 652



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 207/430 (48%), Gaps = 11/430 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G  ++  +L+  F  D  T+ SLI GLC    I EA  +   +    CEP+  TY
Sbjct: 316 GHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY 375

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  LC+ +H   A  L   + +     GV+  P+  T+ ++I GLC     + A EL
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSK----GVL--PDVCTFNSLIQGLCLTSNREIAMEL 429

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK+K   P+  TY+ +I   C  +   EA  L  EM   G   NVV +N ++D LCK
Sbjct: 430 FEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N ++ +A  + D M   GV   + TYNTL++G C + RV  A +L   M   G K   F+
Sbjct: 490 NNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFT 549

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++  +C+  +I+ A  +   M   G +PD+V + TL  GL +  +V+ A KL   +Q
Sbjct: 550 YTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQ 609

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK-SGRL 360
             G+      Y   I  LCK     EA+ LF  +       D+  Y  +  GLC   G +
Sbjct: 610 MKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPI 669

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF-LDMEENAVVPNVITFDM 419
           + A++    +    ++P   ++  +  GLC+    D    L  + ME+     +  +   
Sbjct: 670 QEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSETS--- 726

Query: 420 LIRGFIRINE 429
           +IRGF++I +
Sbjct: 727 IIRGFLKIQK 736



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 188/358 (52%), Gaps = 11/358 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +L  ++     P+ VT+ +LI  LC E+ +  A  L   L   G  PDV T
Sbjct: 350 LGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCT 409

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +L+ GLC TS+  +A+ LFEEM          C+P+  TY+ +I+ LC E  + +A  
Sbjct: 410 FNSLIQGLCLTSNREIAMELFEEMKEKG------CDPDEFTYSILIESLCSERRLKEALM 463

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M+      NVV Y ++I G C      +A+ +F +M   GV  + VT+N +++ LC
Sbjct: 464 LLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC 523

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+ +++EA++L+D MI  G++PD FTY T+L  FC  G +  A ++  +M   GC+  + 
Sbjct: 524 KSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIV 583

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI G CK   ++ A  L   +  KG+      +N +   L +  + + A +LF EM
Sbjct: 584 TYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREM 643

Query: 301 QRNGVAADTWTYRTFIDGLCK-NGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLC 355
              G   D  TY+    GLC   G I EAV+   T+ +L+     +  ++  L +GLC
Sbjct: 644 MEKGDPPDVITYKIVFRGLCNGGGPIQEAVDF--TVEMLEKGILPEFPSFGFLAEGLC 699



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 170/341 (49%), Gaps = 2/341 (0%)

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           LL  +D  +KP+   Y   +     A      + L  +M+   V P+V TFN+++  LCK
Sbjct: 152 LLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCK 211

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++  A  +L+ M  +G+RPD  T+ TL+ GF     V  A  +   M   GC+ T  S
Sbjct: 212 AHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVS 271

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            ++L+NG CK   IE AL    E   +G  PD V  N L  GL     +++  ++ D M 
Sbjct: 272 VNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFML 329

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D +TY + I GLCK G I EAVE+ H +    CE +   YN+LI  LCK   +E
Sbjct: 330 EKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVE 389

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL R L    ++P+V T++ +I GLC     + A +LF +M+E    P+  T+ +LI
Sbjct: 390 AATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILI 449

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                     + + LL +M+      +  + + ++D L KN
Sbjct: 450 ESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKN 490



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 183/368 (49%), Gaps = 2/368 (0%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           +P+T  Y   +  L K   +   + L  +M    + P+V T+  +IR  C A     A  
Sbjct: 161 KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAIL 220

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +  +M + G++P+  TF  +M    +   ++ A R+ +LM++ G    + + N L++G C
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLC 280

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             GR+  A   F+  E   C   V +++ L+NG C+   I+  L +   ML KG + DV 
Sbjct: 281 KEGRIEEALR-FIYEEEGFCPDQV-TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVY 338

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N+L  GL ++ +++ A ++   M       +T TY T I  LCK  ++  A EL   L
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                  D+  +NSLI GLC +   EIA+ELF  +      P+  TYSI+I  LC++ ++
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            +A  L  +ME +    NV+ ++ LI G  + N      ++  +M+ + V   +   + +
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTL 518

Query: 456 VDLLAKNE 463
           ++ L K++
Sbjct: 519 INGLCKSK 526



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 63/214 (29%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     ++ +++     PD  T+T+++K  C +  I  AA +   + + GCEPD+ TY 
Sbjct: 527 RVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYG 586

Query: 63  TLVNGLCRTSHTIVALNLFEEMANG---------NGEFGVVCE----------------- 96
           TL+ GLC+     VA  L   +            N     +C+                 
Sbjct: 587 TLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEK 646

Query: 97  ---PNTVTYTTIIDGLCKEG-FVDKAKELLLQMKDKNIKPNVVTY--------------- 137
              P+ +TY  +  GLC  G  + +A +  ++M +K I P   ++               
Sbjct: 647 GDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDT 706

Query: 138 ------------------TSVIRGFCYAKDWNEA 153
                             TS+IRGF   + +N+A
Sbjct: 707 LIQLINMVMEKGRFSQSETSIIRGFLKIQKFNDA 740


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/444 (33%), Positives = 241/444 (54%), Gaps = 6/444 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R++     P   TF++L+             +L  ++   G +P+++TYT  +  L R  
Sbjct: 219 RMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAG 278

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A  + + M +        C P+ VTYT +ID LC  G +D A EL ++MK  + KP
Sbjct: 279 RIDEACRIMKRMEDDG------CGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKP 332

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           + VTY +++  F    D    K  + EM   G  P+V+TF ++++ LCK G +DEA  LL
Sbjct: 333 DRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLL 392

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D+M + GV P+  TYNTL+ G     R++ A +LF +ME++G   T ++Y + I+ Y K+
Sbjct: 393 DVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKS 452

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
              + AL  + +M  +GI P++V  N     L E+ ++  A  +F+ ++ NG+A D+ TY
Sbjct: 453 GRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTY 512

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              +    K G + EA+EL   +   +CE DI   NSLI+ L K+GR++ A ++F  L  
Sbjct: 513 NMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKD 572

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L P VVTY+ +I GL  +GQ+ +A +LF  M  N   PN ITF+ ++    + +E   
Sbjct: 573 MKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDL 632

Query: 433 VIELLHKMKEINVMPDASIVSIVV 456
            +++L+KM  +N MPD    + ++
Sbjct: 633 ALKMLYKMTTMNCMPDVLTFNTII 656



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 226/464 (48%), Gaps = 16/464 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV    VV   +       D  T+  + KGL     + +    F K+R  G   + ++Y 
Sbjct: 139 RVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYN 198

Query: 63  TLVN-----GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
            L++     GLCR      AL ++  M           +P+  T++ ++    K    + 
Sbjct: 199 GLIHLLLQSGLCRE-----ALEMYRRMVLEG------LKPSLKTFSALMVATGKRRDTET 247

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
            K LL +M+   +KPN+ TYT  IR    A   +EA R+   M D G  P+VVT+ V++D
Sbjct: 248 VKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLID 307

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LC  GK+D+A  L   M     +PD  TY T+LD F   G +   KE +  ME+ G   
Sbjct: 308 ALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAP 367

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            V +++IL+N  CK   I+ A  L   M  +G+ P++  +NTL  GL  +++++ A  LF
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           + M+  GV    +TY  FID   K+G   +A+E F  ++I     +I A N+ +  L + 
Sbjct: 428 NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEM 487

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GRL  A  +F  L    L P+ VTY++M+      GQ+D+A +L  DM EN   P++I  
Sbjct: 488 GRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVI 547

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + LI    +     +  ++  ++K++ + P     + ++  L K
Sbjct: 548 NSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGK 591



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 229/460 (49%), Gaps = 16/460 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  + ++   PD +   SLI  L    R+ EA  +F +L+     P V TY
Sbjct: 523 GQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTY 582

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GL +      A+ LF  M  GNG     C PNT+T+ TI+D LCK   VD A ++
Sbjct: 583 NTLIAGLGKEGQVQRAMELFASMT-GNG-----CPPNTITFNTILDCLCKNDEVDLALKM 636

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M   N  P+V+T+ ++I G    K  ++A  LF   M + + P+ VT   ++  + K
Sbjct: 637 LYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLF-HQMKKMLTPDCVTLCTLLPGVVK 695

Query: 182 NGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           NG M++A ++  D + + GV  D   +  L+ G  LT        LF   + + C     
Sbjct: 696 NGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGI-LTQAGTEKTILF--GDRLVCGRVCK 752

Query: 241 SYSIL---INGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             S+L   I   CK+K+   A S++     + G+KP +  +N L  G   +H  E A+ L
Sbjct: 753 DGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNL 812

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F EM+  G A D +TY   +D   K+G I E  EL+  +    C+ +   +N +I  L K
Sbjct: 813 FTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVK 872

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           S  L+ AL+LF  L  G   P   TY  ++ GL   G++++A++LF +M +    PN   
Sbjct: 873 SNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAI 932

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIV 455
           +++LI GF +  + +   EL  +M    + PD  S  S+V
Sbjct: 933 YNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLV 972



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 221/426 (51%), Gaps = 9/426 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     ++ R+      PD VT+T LI  LC   ++ +A  LF K++    +PD  TY
Sbjct: 278 GRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T+++              + EM A+G         P+ +T+T +++ LCK G +D+A  
Sbjct: 338 ITMLDKFSDCGDLGRVKEFWSEMEADGYA-------PDVITFTILVNALCKAGNIDEAFH 390

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M+ + + PN+ TY ++I G       ++A  LF  M   GV P   T+ + +D   
Sbjct: 391 LLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYG 450

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G+ D+A    + M   G+ P+    N  L      GR+  AK +F  ++S G      
Sbjct: 451 KSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSV 510

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++++  Y K  +++ A+ L S+M     +PD+++ N+L   L++  +V+ A+K+F  +
Sbjct: 511 TYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRL 570

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +   +A    TY T I GL K G +  A+ELF ++    C  +   +N+++D LCK+  +
Sbjct: 571 KDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEV 630

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           ++AL++   +     +P+V+T++ +I GL  + ++  A  LF  M++  + P+ +T   L
Sbjct: 631 DLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKK-MLTPDCVTLCTL 689

Query: 421 IRGFIR 426
           + G ++
Sbjct: 690 LPGVVK 695



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 229/484 (47%), Gaps = 44/484 (9%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV   + +  R+      P  VT+ +LI GL  E ++  A  LF  +   GC P+  T+
Sbjct: 558  GRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITF 617

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             T+++ LC+     +AL +  +M   N      C P+ +T+ TII GL  E  V  A  L
Sbjct: 618  NTILDCLCKNDEVDLALKMLYKMTTMN------CMPDVLTFNTIIHGLVIEKRVSDAIWL 671

Query: 122  LLQMKDKNIKPNVVTYTSVIRG----------FCYAKDWNE-----AKRLFIEMMDQGVQ 166
              QMK K + P+ VT  +++ G          F  A+D+         R F E +  G+ 
Sbjct: 672  FHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGIL 730

Query: 167  PNVVTFNVIM-------DELCKNG-----------KMDEA----SRLLDLMIQHGVRPDA 204
                T   I+         +CK+G           K  +A    S  +    + GV+P  
Sbjct: 731  TQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTL 790

Query: 205  FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             +YN L++GF        A  LF  M++ GC   VF+Y++L++ + K+ +I     LY +
Sbjct: 791  ESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQ 850

Query: 265  MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
            M+    KP+ + HN +   L + + +++A  LF ++     +    TY   +DGL K+G 
Sbjct: 851  MICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGR 910

Query: 325  IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
            + EA ELF  +    C  +   YN LI+G  K+G +  A ELF+ +    + P++ +Y+ 
Sbjct: 911  LEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTS 970

Query: 385  MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
            ++G LC  G++D A   F  +++  +  + I ++++I G  R +   + + L  +M+   
Sbjct: 971  LVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRG 1030

Query: 445  VMPD 448
            + PD
Sbjct: 1031 INPD 1034



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 192/376 (51%), Gaps = 12/376 (3%)

Query: 9    VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNG 67
            +V GR+ K     D      +IK LC   + + A ++F +  +  G +P + +Y  L+ G
Sbjct: 745  LVCGRVCK-----DGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEG 799

Query: 68   LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
                 +  +A NLF EM N        C P+  TY  ++D   K G +++  EL  QM  
Sbjct: 800  FLGVHNDEMAWNLFTEMKNAG------CAPDVFTYNLLLDAHGKSGKINELFELYEQMIC 853

Query: 128  KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
             + KPN +T+  +I     +   ++A  LF +++     P   T+  ++D L K+G+++E
Sbjct: 854  SSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEE 913

Query: 188  ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
            A  L + M+ +G RP+   YN L++GF  TG VN A ELF  M   G +  + SY+ L+ 
Sbjct: 914  AKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVG 973

Query: 248  GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
              C+   ++ AL  + ++   G+  D + +N +  GL   H++E A  L+DEMQ  G+  
Sbjct: 974  CLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINP 1033

Query: 308  DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
            D +TY + I  L   G + +A +L+  L+ +  E ++  YN+LI G   SG  + A  ++
Sbjct: 1034 DLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVY 1093

Query: 368  RSLPCGVLVPNVVTYS 383
            + +  G   PN  T++
Sbjct: 1094 KRMMVGGCSPNTGTFA 1109



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 213/436 (48%), Gaps = 34/436 (7%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD +TF ++I GL  E R+ +A  LF +++     PD  T  TL+ G+ +      A  +
Sbjct: 647  PDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKI 705

Query: 81   FEEMANGNGEF-------------------------------GVVCEPNTVTYTTIIDGL 109
             E+  +  G +                               G VC+  +V    II  L
Sbjct: 706  AEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSV-LMPIIKVL 764

Query: 110  CKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            CK      A+ + ++  K+  +KP + +Y  +I GF    +   A  LF EM + G  P+
Sbjct: 765  CKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPD 824

Query: 169  VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
            V T+N+++D   K+GK++E   L + MI    +P+  T+N ++     +  ++ A +LF 
Sbjct: 825  VFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFY 884

Query: 229  SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
             + S     T  +Y  L++G  K+  +E A  L+ EM+  G +P+  I+N L  G  +  
Sbjct: 885  DLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTG 944

Query: 289  QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
             V  A +LF  M R G+  D  +Y + +  LC+ G + +A+  F  L+      D  AYN
Sbjct: 945  DVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYN 1004

Query: 349  SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
             +IDGL +S R+E AL L+  +    + P++ TY+ +I  L   G +++A  L+ +++  
Sbjct: 1005 LMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFI 1064

Query: 409  AVVPNVITFDMLIRGF 424
             + PNV T++ LIRG+
Sbjct: 1065 GLEPNVFTYNALIRGY 1080



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 209/497 (42%), Gaps = 44/497 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR         ++      P+ V   + +  L    R+ EA  +F +L+  G  PD  TY
Sbjct: 453 GRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTY 512

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++    +      A+ L  +M+         CEP+ +   ++I+ L K G VD+A ++
Sbjct: 513 NMMMKCYSKAGQVDEAIELLSDMSENQ------CEPDIIVINSLINTLYKAGRVDEAWKM 566

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++KD  + P VVTY ++I G         A  LF  M   G  PN +TFN I+D LCK
Sbjct: 567 FCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCK 626

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N ++D A ++L  M      PD  T+NT++ G  +  RV+ A  LF  M+ M     V +
Sbjct: 627 NDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCV-T 685

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
              L+ G  KN  +E A  +  + + + G+  D      L  G+      E+     D +
Sbjct: 686 LCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRL 745

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTLRILKCEFDIRAYNSLIDGLC---- 355
               V  D       I  LCK+   + A  +F    + L  +  + +YN LI+G      
Sbjct: 746 VCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHN 805

Query: 356 -------------------------------KSGRLEIALELFRSLPCGVLVPNVVTYSI 384
                                          KSG++    EL+  + C    PN +T++I
Sbjct: 806 DEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNI 865

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  L     +DKA DLF D+      P   T+  L+ G ++     +  EL  +M +  
Sbjct: 866 IIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925

Query: 445 VMPDASIVSIVVDLLAK 461
             P+ +I +I+++   K
Sbjct: 926 CRPNNAIYNILINGFGK 942



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 210/461 (45%), Gaps = 52/461 (11%)

Query: 6    HGFVVLGRI---------LKSCFTPDAVTFTSLIKGLCAESRIMEAA-----------AL 45
            HG V+  R+         +K   TPD VT  +L+ G+  ++ +ME A            +
Sbjct: 657  HGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGV-VKNGLMEDAFKIAEDFVHRLGV 715

Query: 46   FTKLRVF-----------GCEPDVFTYTTLVNG---------------LCRTSHTIVALN 79
            +   R +           G E  +     LV G               LC+    +VA +
Sbjct: 716  YVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQS 775

Query: 80   LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            +F        E GV  +P   +Y  +I+G       + A  L  +MK+    P+V TY  
Sbjct: 776  VFIRFTK---ELGV--KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNL 830

Query: 140  VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            ++     +   NE   L+ +M+    +PN +T N+I+  L K+  +D+A  L   ++   
Sbjct: 831  LLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD 890

Query: 200  VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
              P   TY  LLDG   +GR+  AKELF  M   GC+     Y+ILING+ K  ++  A 
Sbjct: 891  FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTAC 950

Query: 260  SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             L+  M+ +GI+PD+  + +L   L E  +V+ A   F+++++ G+  D+  Y   IDGL
Sbjct: 951  ELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGL 1010

Query: 320  CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
             ++  I EA+ L+  ++      D+  YNSLI  L  +G +E A +L+  L    L PNV
Sbjct: 1011 GRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNV 1070

Query: 380  VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             TY+ +I G    G  D A  ++  M      PN  TF  L
Sbjct: 1071 FTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 156/317 (49%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F  M +Q ++ ++ T+ +I   L   G + +       M + G   +A++YN L+    
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            +G    A E++  M   G K ++ ++S L+    K ++ E   SL  EM S G+KP++ 
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY 265

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +      L    +++ A ++   M+ +G   D  TY   ID LC  G + +A+ELF  +
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKM 325

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +    + D   Y +++D     G L    E +  +      P+V+T++I++  LC  G +
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNI 385

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           D+A  L   M +  V+PN+ T++ LI G +R+N     ++L + M+ + V+P A    + 
Sbjct: 386 DEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILF 445

Query: 456 VDLLAKNEISLNSLPSF 472
           +D   K+  S  +L +F
Sbjct: 446 IDFYGKSGRSDKALETF 462



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 6/229 (2%)

Query: 19   FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            F+P   T+  L+ GL    R+ EA  LF ++  +GC P+   Y  L+NG  +T     A 
Sbjct: 891  FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTAC 950

Query: 79   NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
             LF+ M            P+  +YT+++  LC+ G VD A     ++K   +  + + Y 
Sbjct: 951  ELFKRMVREG------IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYN 1004

Query: 139  SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
             +I G   +    EA  L+ EM  +G+ P++ T+N ++  L   G +++A +L + +   
Sbjct: 1005 LMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFI 1064

Query: 199  GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
            G+ P+ FTYN L+ G+ ++G  + A  ++  M   GC     +++ L N
Sbjct: 1065 GLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 6/139 (4%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV        ++ ++    D++ +  +I GL    RI EA  L+ +++  G  PD+FTY
Sbjct: 979  GRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTY 1038

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +L+  L        A  L+EE+     +F +  EPN  TY  +I G    G  D A  +
Sbjct: 1039 NSLILNLGVAGMVEQAGKLYEEL-----QF-IGLEPNVFTYNALIRGYSMSGNSDSAYAV 1092

Query: 122  LLQMKDKNIKPNVVTYTSV 140
              +M      PN  T+  +
Sbjct: 1093 YKRMMVGGCSPNTGTFAQL 1111


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 149/451 (33%), Positives = 249/451 (55%), Gaps = 22/451 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++       G++ K  F P  VTF +L+ GLC E R+ EA  LF ++    C+P+V T+T
Sbjct: 30  KLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFT 85

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NGLCR    + A+ L + M     E G+  +PN +TY TI+DG+CK G    A  LL
Sbjct: 86  TLMNGLCREGRVVEAVALLDRMV----EDGL--QPNQITYGTIVDGMCKMGDTVSALNLL 139

Query: 123 LQMKD-KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            +M++  +IKP+VV Y+++I G        +A+ LFIEM D+G+ P++VT++ +++  C 
Sbjct: 140 RKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCS 199

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +GK  EA RLL  M+   + PD  T++ L++     G +N A++L   M S G    V +
Sbjct: 200 SGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVT 259

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSK-----------GIKPDVVIHNTLFVGLFEIHQV 290
            + L++G C + +++ AL ++  M              G++PDV  +N L  GL    + 
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A +L++EM   G+  DT TY + I+GLCK   + EA ++F ++       +I  +N+L
Sbjct: 320 LEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTL 379

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I G CK+G ++  LELF  +    +V N +TY  +I G    G ++ + D+F +M  + V
Sbjct: 380 ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
            P+ IT   ++ G     E  + + +L +++
Sbjct: 440 YPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/456 (33%), Positives = 246/456 (53%), Gaps = 23/456 (5%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +F  LIK  C+ S++  A + F KL   G  P + T+ TL++GLC       AL+LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M          C+PN VT+TT+++GLC+EG V +A  LL +M +  ++PN +TY +++
Sbjct: 74  HQM----------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 142 RGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
            G C   D   A  L  +M +   ++P+VV ++ I+D L K+G+  +A  L   M   G+
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY+ +++GFC +G+ + A+ L   M        V ++S LIN   K  ++  A  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR-----------NGVAADT 309
           L  EM+S G+ P+VV  NTL  GL +  +++ A ++F  MQ+           NGV  D 
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I GL   G  +EA EL+  +       D   Y+S+I+GLCK  RL+ A ++F S
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +      PN+VT++ +I G C  G +D   +LF +M    +V N IT+  LIRGF ++  
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423

Query: 430 PSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEI 464
            +  +++  +M    V PD  +I +++  L +K E+
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 459



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 191/381 (50%), Gaps = 18/381 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFT 60
           GRV     +L R+++    P+ +T+ +++ G+C     + A  L  K+      +PDV  
Sbjct: 95  GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVI 154

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GL +      A NLF EM +  G F     P+ VTY+ +I+G C  G   +A+ 
Sbjct: 155 YSAIIDGLWKDGRHTDAQNLFIEMQD-KGIF-----PDIVTYSCMINGFCSSGKWSEAQR 208

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  + I P+VVT++ +I       D N A+ L  EM+  GV PNVVT N ++D LC
Sbjct: 209 LLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLC 268

Query: 181 KNGKMDEA--------SRLLDLMIQH---GVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
            +GK+ +A          ++D+   H   GV PD  TYN L+ G    G+   A+EL+  
Sbjct: 269 DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 328

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G      +YS +ING CK   ++ A  ++  M SK   P++V  NTL  G  +   
Sbjct: 329 MPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGM 388

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V+   +LF EM R G+ A+  TY T I G  K G I  ++++F  +       D     +
Sbjct: 389 VDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRN 448

Query: 350 LIDGLCKSGRLEIALELFRSL 370
           ++ GL     L+ AL +   L
Sbjct: 449 MLTGLWSKEELKRALAMLEEL 469



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 173/332 (52%), Gaps = 17/332 (5%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           S   PD V ++++I GL  + R  +A  LF +++  G  PD+ TY+ ++NG C +     
Sbjct: 146 SHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSE 205

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A  L +EM            P+ VT++ +I+ L KEG ++ A++LL +M    + PNVVT
Sbjct: 206 AQRLLQEMLVRK------ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVT 259

Query: 137 YTSVIRGFCYAKDWNEAKRLFI----EMMD-------QGVQPNVVTFNVIMDELCKNGKM 185
             +++ G C +    +A  +F      MMD        GV+P+V T+N+++  L   GK 
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
            EA  L + M   G+ PD  TY+++++G C   R++ A ++F SM S      + +++ L
Sbjct: 320 LEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTL 379

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I GYCK   ++  L L+ EM  +GI  + + + TL  G  ++  +  +  +F EM  +GV
Sbjct: 380 ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             DT T R  + GL     +  A+ +   L++
Sbjct: 440 YPDTITIRNMLTGLWSKEELKRALAMLEELQM 471



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 147/286 (51%), Gaps = 7/286 (2%)

Query: 196 IQHGVR-P-DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
           I+HG++ P D +++N L+  FC   ++  A   F  +  +G   T+ +++ L++G C   
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            +  AL L+ +M     KP+VV   TL  GL    +V  A  L D M  +G+  +  TY 
Sbjct: 65  RVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
           T +DG+CK G  V A+ L   +  L   + D+  Y+++IDGL K GR   A  LF  +  
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + P++VTYS MI G C+ G+  +A+ L  +M    + P+V+TF  LI   ++  + + 
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
             +LL +M    V P+    + ++D L  +    ++L  F   ++ 
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 21/237 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-----------VFGCEPDV 58
           +L  ++ S   P+ VT  +L+ GLC   ++ +A  +F  ++             G EPDV
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            TY  L++GL      + A  L+EEM +     G+V  P+TVTY+++I+GLCK+  +D+A
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHR----GIV--PDTVTYSSMINGLCKQSRLDEA 357

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            ++   M  K+  PN+VT+ ++I G+C A   ++   LF EM  +G+  N +T+  ++  
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA----KELFVSME 231
             K G ++ +  +   MI  GV PD  T   +L G      +  A    +EL +SM+
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMSMD 474


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 246/459 (53%), Gaps = 9/459 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF  L  ++     PD +  T+LI+G C   +  +AA +   L   G  PDV TY
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C+      AL++ + M+           P+ VTY TI+  LC  G + +A E+
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMS---------VSPDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  ++  P+V+TYT +I   C       A +L  EM D+G  P+VVT+NV+++ +CK
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA + L+ M   G +P+  T+N +L   C TGR   A++L   M   G   +V +
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILIN  C+   +  A+ +  +M   G +P+ + +N L  G  +  +++RA +  + M 
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY T +  LCK+G + +AVE+ + L    C   +  YN++IDGL K+G+  
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++L   +    L P+ +TYS ++GGL  +G++D+A   F + E   + PN +TF+ ++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            G  +  +  + I+ L  M      P+ +  +I+++ LA
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 235/455 (51%), Gaps = 19/455 (4%)

Query: 6   HGFVVLGRILK----------SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
            GF  LG+  K          S   PD +T+  +I G C    I  A ++  ++ V    
Sbjct: 145 RGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---S 201

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PDV TY T++  LC +     A+ + + M   +      C P+ +TYT +I+  C++  V
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEATCRDSGV 255

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A +LL +M+D+   P+VVTY  ++ G C     +EA +   +M   G QPNV+T N+I
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  +C  G+  +A +LL  M++ G  P   T+N L++  C  G +  A ++   M   GC
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +    SY+ L++G+CK K+++ A+     M+S+G  PD+V +NT+   L +  +VE A +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + +++   G +    TY T IDGL K G   +A++L   +R    + D   Y+SL+ GL 
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           + G+++ A++ F       + PN VT++ ++ GLC   Q D+A D  + M      PN  
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
           ++ +LI G        + +ELL+++    +M  +S
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 198/417 (47%), Gaps = 45/417 (10%)

Query: 85  ANGNGEFGVV--------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           +NGNG +  V         E N      +  G  +EGF     + L  M      P+++ 
Sbjct: 85  SNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGF-----KFLENMVYHGNVPDIIP 139

Query: 137 YTSVIRGFCYAKDWNEAKRLF-------------------------------IEMMDQ-G 164
            T++IRGFC      +A ++                                + ++D+  
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V P+VVT+N I+  LC +GK+ +A  +LD M+Q    PD  TY  L++  C    V HA 
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +L   M   GC   V +Y++L+NG CK   ++ A+   ++M S G +P+V+ HN +   +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               +   A KL  +M R G +    T+   I+ LC+ G +  A+++   +    C+ + 
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            +YN L+ G CK  +++ A+E    +      P++VTY+ M+  LC DG+++ A ++   
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +      P +IT++ +I G  +  +  K I+LL +M+  ++ PD    S +V  L++
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 160/457 (35%), Positives = 243/457 (53%), Gaps = 5/457 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           G ++ GF  LG+I+K+     AVTFT L++ LCAE R  +A  +   ++   GC PDVF+
Sbjct: 158 GCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFS 217

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL+ GLC       A  L   MA    E G  C PN V+YTT+I G  KEG V KA  
Sbjct: 218 YTTLLKGLCAEKKCEEAAELIHMMA----EDGDNCPPNVVSYTTVIHGFFKEGDVGKAYT 273

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M D  I PNVVT  SVI G C  +  ++A+ +  +M+D+ + PN  T+N ++    
Sbjct: 274 LFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYL 333

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G+  EA R+L  M + G RP+  TY+ L+D  C +G    A+E+F SM   G K    
Sbjct: 334 SSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNAS 393

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  L++GY     +    ++   M+  G++P   + N       +  +++ A   F++M
Sbjct: 394 TYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKM 453

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           Q+ G   D   Y T IDGLCK G + +A+  F  +       DI  +N+LI G    G+ 
Sbjct: 454 QQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKW 513

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A ELF  +    + PNV T++ MI  L  +G++ +AR LF  M      PNV++++ +
Sbjct: 514 EKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTM 573

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           I G+    E  +V++LL  M  I + P A   + ++D
Sbjct: 574 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLD 610



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 216/432 (50%), Gaps = 9/432 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD  TF  LI   C    +    A   ++   G      T+T L+  LC    T  A+N
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 80  L-FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVT 136
           +    M     E G  C P+  +YTT++ GLC E   ++A EL+  M +   N  PNVV+
Sbjct: 201 IVLRRMP----ELG--CTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVS 254

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           YT+VI GF    D  +A  LF +M+D G+ PNVVT N ++D LCK   MD+A  +L  MI
Sbjct: 255 YTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI 314

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
              + P+  TYN+L+ G+  +G+   A  +   M   G +  V +YS+LI+  CK+    
Sbjct: 315 DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHA 374

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  +++ M+  G KP+   + +L  G      +     + D M +NG+      +   I
Sbjct: 375 EAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEI 434

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
              CK G + EA   F+ ++      DI AY ++IDGLCK GRL+ A+  F  +    L 
Sbjct: 435 YAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLS 494

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+++T++ +I G    G+ +KA +LF +M +  + PNV TF+ +I    +  + ++  +L
Sbjct: 495 PDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKL 554

Query: 437 LHKMKEINVMPD 448
              M      P+
Sbjct: 555 FDLMPRAGAKPN 566



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 198/424 (46%), Gaps = 41/424 (9%)

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           +A+++F  MA    +      P+  T+  +I   C  G ++     L Q+    ++   V
Sbjct: 124 LAVSMFNRMARAGAK---KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAV 180

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           T+T ++R  C  K  ++A  + +  M + G  P+V ++  ++  LC   K +EA+ L+ +
Sbjct: 181 TFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHM 240

Query: 195 MIQHG--VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           M + G    P+  +Y T++ GF   G V  A  LF  M   G    V + + +I+G CK 
Sbjct: 241 MAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKV 300

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           + ++ A ++  +M+ + I P+   +N+L  G     Q   A ++  EM R+G   +  TY
Sbjct: 301 QAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTY 360

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL------------------ 354
              ID LCK+G   EA E+F+++     + +   Y SL+ G                   
Sbjct: 361 SMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQ 420

Query: 355 -----------------CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                            CK GRL+ A   F  +     +P++V Y+ +I GLC  G++D 
Sbjct: 421 NGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDD 480

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A   F  M ++ + P++ITF+ LI GF    +  K  EL ++M +  + P+ +  + ++D
Sbjct: 481 AMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMID 540

Query: 458 LLAK 461
            L K
Sbjct: 541 KLFK 544



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 169/348 (48%), Gaps = 47/348 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +    +L  + +    P+ VT++ LI  LC      EA  +F  +   G +P+  TY
Sbjct: 336 GQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTY 395

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG----------EFGVVCE--------------- 96
            +L++G   T   +V +N  +++   NG          E    C+               
Sbjct: 396 GSLLHGYA-TEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQ 454

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+ V YTT+IDGLCK G +D A     QM D  + P+++T+ ++I GF     W 
Sbjct: 455 QQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWE 514

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A+ LF EMMD+G+ PNV TFN ++D+L K GK+ EA +L DLM + G +P+  +YNT++
Sbjct: 515 KAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMI 574

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G+ + G V    +L   M  +G K T  +++ L++G                M+S G+K
Sbjct: 575 HGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLK 618

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           PDVV   TL     E  ++E    LF EM       DT T    + G+
Sbjct: 619 PDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGV 666



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 13/290 (4%)

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFC---LTGRVNHAKELFVSM----ESMGCKHT 238
           ++A  L D ++Q       +  N LL       ++  V     L VSM       G K  
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140

Query: 239 ---VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + ++ ILI+  C    +    +   +++  G++   V    L   L    +   A  
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 296 L-FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL--KCEFDIRAYNSLID 352
           +    M   G   D ++Y T + GLC      EA EL H +      C  ++ +Y ++I 
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G  K G +  A  LF  +    + PNVVT + +I GLC    MDKA  +   M +  ++P
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           N  T++ LI G++   + ++ + +L +M      P+    S+++D L K+
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKS 370



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 23/233 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+        +++    +PD +TF +LI G     +  +A  LF ++   G  P+V T
Sbjct: 475 IGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNT 534

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + ++++ L +      A  LF+ M           +PN V+Y T+I G    G V +  +
Sbjct: 535 FNSMIDKLFKEGKVTEARKLFDLMPRAGA------KPNVVSYNTMIHGYFIAGEVGEVMK 588

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M    +KP  VT+ +++ G                M+  G++P+VVT   ++D  C
Sbjct: 589 LLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVVTCKTLIDSCC 632

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           ++G++++   L   M+    + D  T N  L G  +     H   + +S++++
Sbjct: 633 EDGRIEDILTLFREMLGKADKTDTITENIKLRGVTVKASY-HCSSVVISLKAL 684


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 148/420 (35%), Positives = 237/420 (56%), Gaps = 9/420 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT T L+   C    I    ++ TK+   G EP+  T+TTL+ G+C       AL L
Sbjct: 43  PSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEAL-L 101

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +    +G F +    + V+Y  +++GLCK G    A ++L   +   +  +VV Y+++
Sbjct: 102 FHDHVVAHG-FKL----DQVSYAILMNGLCKMGETRAAMQML---RKTWVNADVVMYSTI 153

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  K   +A RL+ EM+ +G+ PNV TF++++D LCK+ K  +A  LL +M++ GV
Sbjct: 154 IDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGV 213

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P+  TY  ++DG+CL  +VN A  +F  M   G +  V+ Y+I+ING CK K ++ A++
Sbjct: 214 KPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMN 273

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM  K I PDVV +N L  GL ++ ++  + +L DEM+  G   D  TY + +  LC
Sbjct: 274 LFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALC 333

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           KN ++ +A+ L   ++    + ++  Y +LIDGLCK GRLE A  +F+ +        V 
Sbjct: 334 KNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVW 393

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY++MI GLC  G  D+A  L   ME+NA +P+ ++++ +I       E  K  +LL  M
Sbjct: 394 TYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAM 453



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/404 (33%), Positives = 212/404 (52%), Gaps = 9/404 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++  F +L +ILK  + P+++TFT+LIKG+C   +  EA      +   G + D  +Y
Sbjct: 59  GGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSY 118

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGLC+   T  A+ +  +              + V Y+TIID LCK  FV  A  L
Sbjct: 119 AILMNGLCKMGETRAAMQMLRK---------TWVNADVVMYSTIIDSLCKGKFVTDAYRL 169

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K I PNV T++ ++   C  +   +A  L   MM +GV+PNVVT+  IMD  C 
Sbjct: 170 YSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCL 229

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++++A  + ++M+Q GV P+ + YN +++G C   RV+ A  LF  M        V +
Sbjct: 230 VNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVT 289

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+G CK  +I  +L L  EM S G   D++ +N+L   L + H +++A  L  E++
Sbjct: 290 YNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIK 349

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY T IDGLCK+G + +A  +F  +        +  YN +I+GLCK G  +
Sbjct: 350 DQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFD 409

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            AL L   +     +P+ V+Y  +I  L   G+  K   L   M
Sbjct: 410 EALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAM 453



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 229/448 (51%), Gaps = 16/448 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP  + F  ++  L   +    A +LF +L   G +P + T T L+N  C T       +
Sbjct: 7   TPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFS 66

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL---QMKDKNIKPNVVT 136
           +  ++        +  EPN++T+TT+I G+C  G   +A E LL    +     K + V+
Sbjct: 67  ILTKI------LKMGYEPNSITFTTLIKGMCLNG---QAYEALLFHDHVVAHGFKLDQVS 117

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y  ++ G C   +   A ++   +    V  +VV ++ I+D LCK   + +A RL   MI
Sbjct: 118 YAILMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMI 174

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+ P+ +T++ L+D  C   +   A  L   M   G K  V +Y  +++GYC   ++ 
Sbjct: 175 AKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVN 234

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL++++ M+ +G++P+V  +N +  GL +  +V+ A  LF EM    +  D  TY   I
Sbjct: 235 KALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILI 294

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           DGLCK G I  ++EL   +R +    DI  YNSL+  LCK+  L+ A+ L + +    + 
Sbjct: 295 DGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PNV TY+ +I GLC DG+++ A  +F ++        V T++++I G  +     + + L
Sbjct: 355 PNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALAL 414

Query: 437 LHKMKEINVMPDA-SIVSIVVDLLAKNE 463
           L +M++   +PDA S  +I+  L  K E
Sbjct: 415 LSRMEDNACIPDAVSYETIIYALSEKGE 442



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 206/433 (47%), Gaps = 42/433 (9%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V+  + +   ++     P+  TF+ L+  LC + +  +A  L   +   G +P+V TY  
Sbjct: 163 VTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGA 222

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           +++G C  +    ALN+F  M     + GV  EPN   Y  II+GLCK+  VD+A  L  
Sbjct: 223 IMDGYCLVNQVNKALNIFNVMV----QEGV--EPNVWCYNIIINGLCKKKRVDEAMNLFK 276

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M  K I P+VVTY  +I G C     + +  L  EM   G   +++T+N ++  LCKN 
Sbjct: 277 EMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNH 336

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +D+A  L+  +   G++P+  TY TL+DG C  GR+  A  +F  + + G   TV++Y+
Sbjct: 337 HLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYN 396

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           ++ING CK    + AL+L S M      PD V + T+   L E  +  +  KL   M   
Sbjct: 397 VMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVR 456

Query: 304 GVAA---------------DTW-TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
           G++                D W  Y +  DG+    +          L +LKC   I+  
Sbjct: 457 GLSKRLKKKVNMTTIADLNDKWAAYASLEDGMIHPIF----------LMLLKC-LSIKCS 505

Query: 348 NSLIDGLCKSGRLEIALELFR--SLPCGVLVPNVVT-----YSIMIGGLCNDGQMDKARD 400
            S+ +G+  +GR E A+E  +  ++P  +   ++ +     + I  G +  D   +  +D
Sbjct: 506 GSM-EGVDITGR-EDAIEYAKKHNVPIPITKKSIYSRDRNLWHINHGDVLEDSANEPKKD 563

Query: 401 LFLDMEENAVVPN 413
           +++   +    PN
Sbjct: 564 IYMLTVDPEDAPN 576



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 119/230 (51%), Gaps = 6/230 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + +V+    +   +++    P+   +  +I GLC + R+ EA  LF ++      PDV T
Sbjct: 230 VNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVT 289

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++GLC+      +L L +EM +      +      +TY +++  LCK   +D+A  
Sbjct: 290 YNILIDGLCKLGKISTSLELVDEMRSIGKTVDI------ITYNSLLHALCKNHHLDQAIT 343

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+ ++KD+ I+PNV TYT++I G C      +A  +F E++ +G    V T+NV+++ LC
Sbjct: 344 LVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLC 403

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           K G  DEA  LL  M  +   PDA +Y T++      G      +L  +M
Sbjct: 404 KKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAM 453



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 148/303 (48%), Gaps = 5/303 (1%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+     P ++ FN I+  L K      A  L   +  +G++P   T   L++ +C TG 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           +     +   +  MG +    +++ LI G C N +   AL  +  +++ G K D V +  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  GL ++ +   A ++   +++  V AD   Y T ID LCK  ++ +A  L+  + I K
Sbjct: 121 LMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEM-IAK 176

Query: 340 CEF-DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             F ++  ++ L+D LCK  + + A+ L   +    + PNVVTY  ++ G C   Q++KA
Sbjct: 177 GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKA 236

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            ++F  M +  V PNV  ++++I G  +     + + L  +M    + PD    +I++D 
Sbjct: 237 LNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDG 296

Query: 459 LAK 461
           L K
Sbjct: 297 LCK 299



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 131/269 (48%), Gaps = 3/269 (1%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+Q    P    +N +L           A  LF  +E  G K ++ + +IL+N YC    
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           I    S+ +++L  G +P+ +   TL  G+    Q   A    D +  +G   D  +Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            ++GLCK G    A+++   LR      D+  Y+++ID LCK   +  A  L+  +    
Sbjct: 121 LMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + PNV T+SI++  LC D +  +A +L   M +  V PNV+T+  ++ G+  +N+ +K +
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            + + M +  V P+    +I+++ L K +
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKK 266



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 6/166 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++S    ++  +     T D +T+ SL+  LC    + +A  L  +++  G +P+V T
Sbjct: 300 LGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCT 359

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL++GLC+      A  +F+E+        V       TY  +I+GLCK+G  D+A  
Sbjct: 360 YTTLIDGLCKDGRLEDAYVIFQEILTEGYHITV------WTYNVMINGLCKKGLFDEALA 413

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           LL +M+D    P+ V+Y ++I       +  +  +L   M+ +G+ 
Sbjct: 414 LLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 146/440 (33%), Positives = 237/440 (53%), Gaps = 8/440 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   +L     P+  T  +++        I+EA    +K+   G  PD FTYT+L+ G C
Sbjct: 201 VYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYC 260

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R +    A  +F  M N        C  N V+YTTII GLC+ G +D+   L  +M++ +
Sbjct: 261 RNNDVNSAYKVFNMMPNKG------CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD 314

Query: 130 IKPNVVTYTSVIRGFCYAKDWN-EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             P V TYT +I    +  D N E   LF EM ++  +PNV T+ V++D +CK  K+DE+
Sbjct: 315 CYPTVRTYTVIIHAL-FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDES 373

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            R+L+ M++ G+ P   TYN L+ G+C  GR+  A E+   MES  C+    +Y+ LI G
Sbjct: 374 RRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICG 433

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           + K K +  A++L S+ML   + P +V +N+L     +    + A+KL D ++ NG+  D
Sbjct: 434 FSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPD 493

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            WTY  FID LCK+  + EA +LF++L+    + +   Y +LIDG CK+G+++ A+ L  
Sbjct: 494 QWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLE 553

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +     +PN  TY+ +I G+C +G++ +   +  +M +  V P V T+ +LI   +R  
Sbjct: 554 RMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREG 613

Query: 429 EPSKVIELLHKMKEINVMPD 448
           +      + ++M      PD
Sbjct: 614 DFDHANRVFNQMVSFGHKPD 633



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 216/430 (50%), Gaps = 6/430 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + V++T++I GLC   RI E  +LF K+R   C P V TYT +++ L      +  ++LF
Sbjct: 283 NEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLF 342

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM   +      CEPN  TYT ++D +CKE  +D+++ +L +M +K + P+VVTY ++I
Sbjct: 343 NEMRERS------CEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALI 396

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           RG+C       A  +   M     +PN  T+N ++    K   + +A  LL  M++  + 
Sbjct: 397 RGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLT 456

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P   TYN+L+   C  G  + A +L   ++  G     ++YS+ I+  CK+K +E A  L
Sbjct: 457 PSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDL 516

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           ++ +  KGIK + V++  L  G  +  +++ A  L + M       ++ TY + I G+CK
Sbjct: 517 FNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCK 576

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + E + +   +  +  +  +  Y  LI+ + + G  + A  +F  +      P+V T
Sbjct: 577 EGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYT 636

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+  I   C  G + +A  +   M E  V+P+ +T+ +LI  + R+        +L +M 
Sbjct: 637 YTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRML 696

Query: 442 EINVMPDASI 451
           +    P   I
Sbjct: 697 DAGCDPSHPI 706



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 182/360 (50%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN  T  T+++   K G + +A   + ++    + P+  TYTS+I G+C   D N A ++
Sbjct: 212 PNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKV 271

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F  M ++G + N V++  I+  LC+ G++DE   L   M +    P   TY  ++     
Sbjct: 272 FNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFG 331

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             R     +LF  M    C+  V +Y+++++  CK ++++ +  + +EM+ KG+ P VV 
Sbjct: 332 NDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVT 391

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L  G  E  ++E A ++   M+ N    +  TY   I G  K  ++ +A+ L   + 
Sbjct: 392 YNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKML 451

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             K    +  YNSLI   CK+G  + A +L   L    LVP+  TYS+ I  LC   +M+
Sbjct: 452 ESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRME 511

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A DLF  ++E  +  N + +  LI G  +  +  + I LL +M   + +P++S  + ++
Sbjct: 512 EACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLI 571



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 163/342 (47%), Gaps = 6/342 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +++    P  VT+ +LI+G C E RI  A  +   +    C P+  TY  L+ G  
Sbjct: 376 ILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFS 435

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +  H   A+ L  +M            P+ VTY ++I   CK G  D A +LL  +K+  
Sbjct: 436 KRKHVHKAMTLLSKMLESK------LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG 489

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+  TY+  I   C +K   EA  LF  + ++G++ N V +  ++D  CK GK+DEA 
Sbjct: 490 LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAI 549

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL+ M      P++ TYN+L+ G C  G+V     +  +M  MG K TV +Y+ILI   
Sbjct: 550 SLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEM 609

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +  + + A  ++++M+S G KPDV  +            V+ A  +   M   GV  D+
Sbjct: 610 LREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDS 669

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            TY   I    + G   +A  +   +    C+     +N+LI
Sbjct: 670 LTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 159/313 (50%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           +E KR++ EM++  + PN+ T N +++   K G + EA+  +  + Q G+ PD+FTY +L
Sbjct: 196 DEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSL 255

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           + G+C    VN A ++F  M + GC+    SY+ +I+G C+   I+  +SL+ +M     
Sbjct: 256 ILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDC 315

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P V  +  +   LF   +      LF+EM+      +  TY   +D +CK   + E+  
Sbjct: 316 YPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRR 375

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           + + +        +  YN+LI G C+ GR+E ALE+   +      PN  TY+ +I G  
Sbjct: 376 ILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFS 435

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
               + KA  L   M E+ + P+++T++ LI    +        +LL  +KE  ++PD  
Sbjct: 436 KRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQW 495

Query: 451 IVSIVVDLLAKNE 463
             S+ +D L K++
Sbjct: 496 TYSVFIDTLCKSK 508



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 121/248 (48%), Gaps = 35/248 (14%)

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           K +V SY+ L+    +   I+    +Y+EML+  I P++   NT+     ++  +  A  
Sbjct: 176 KLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANL 235

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
              ++ + G++ D++TY + I G C+N  +  A ++F+ +    C  +  +Y ++I GLC
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLC 295

Query: 356 KSGRLEIALELFRSL---PCGVLV--------------------------------PNVV 380
           ++GR++  + LF+ +    C   V                                PNV 
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVH 355

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY++M+  +C + ++D++R +  +M E  +VP+V+T++ LIRG+         +E+L  M
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM 415

Query: 441 KEINVMPD 448
           +  N  P+
Sbjct: 416 ESNNCRPN 423



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 85/216 (39%), Gaps = 37/216 (17%)

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           K  V  +N L + L     ++   +++ EM  + +  + +T  T ++   K G IVEA  
Sbjct: 176 KLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEA-- 233

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
                            N  +  + ++G                L P+  TY+ +I G C
Sbjct: 234 -----------------NLYVSKIFQAG----------------LSPDSFTYTSLILGYC 260

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            +  ++ A  +F  M       N +++  +I G        + I L  KM+E +  P   
Sbjct: 261 RNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVR 320

Query: 451 IVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNV 486
             ++++  L  N+ +L  +  F  +E +E   E NV
Sbjct: 321 TYTVIIHALFGNDRNLEGMDLF--NEMRERSCEPNV 354



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G   H   V  +++     PD  T+T+ I   C    + EA  +  ++   G  PD  TY
Sbjct: 613 GDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTY 672

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTII 106
           T L++   R      A N+ + M +        C+P+   +  +I
Sbjct: 673 TLLISAYERLGLAYDAFNVLKRMLDAG------CDPSHPIWNNLI 711


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 163/501 (32%), Positives = 263/501 (52%), Gaps = 33/501 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +    V  R+ +    PD  T+ +L+  LC   R MEA  +F  +   G +P+  TY
Sbjct: 287 GKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATY 346

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG----------------EFGVV----------- 94
            TL++G   T  ++V ++   +M   NG                + G V           
Sbjct: 347 GTLLHGYA-TEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMR 405

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+TVTY  ++D LC  G VD A     ++  + + P+ V + ++I G C    W+
Sbjct: 406 RQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWD 465

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A+ L +EM+ +G+ PN + FN +++ LCK G +  A  + DLM++  V+ D  TYNTL+
Sbjct: 466 KAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLI 525

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+CL G+V+ A +L   M   G K    +Y+ +INGYCKN  IE A SL+ +M SKG+ 
Sbjct: 526 DGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVN 585

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P +V ++T+  GLF+  +   A +L+  M ++G+  D  TY   + GLC+N    +A+ +
Sbjct: 586 PGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRI 645

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  L ++    + R +N +ID L K GR + A +LF SL    LVPNVVTY +M+  L  
Sbjct: 646 FQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIE 705

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G +++  DLFL +E+N    N    + L+   ++  E  K    L K+ E N   +AS 
Sbjct: 706 QGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEAST 765

Query: 452 VSIVVDLLA--KNEISLNSLP 470
              +V L++  K +  +N++P
Sbjct: 766 AESLVLLVSSGKYDQHINAIP 786



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 266/545 (48%), Gaps = 76/545 (13%)

Query: 3   RVSH---GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDV 58
           RV H    F  LGR+++S +T +A+TF+ L+K LC + R  EA  +   ++ V GC P+V
Sbjct: 103 RVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNV 162

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF-VDK 117
           F+YT L+ GLC  + +  AL+L   M   +   G    P+ V+Y T+I+GL +EG  +D 
Sbjct: 163 FSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGY-PPDVVSYNTVINGLLREGRQLDT 221

Query: 118 AKELLLQMKDKNIKPNVVTYTSVI-----------------------------------R 142
           A  L  QM D+ + P+VVTY S+I                                    
Sbjct: 222 AYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLH 281

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR------------ 190
           G+C +   N+A  +F  M   GV+P+V T+N +M  LCKNG+  EA +            
Sbjct: 282 GYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP 341

Query: 191 -----------------------LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
                                  LLD+M+++G++PD + +N L+  +   G+V+ A  LF
Sbjct: 342 NSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLF 401

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G      +Y I+++  C   +++ A++ +  ++S+G+ PD V+   L  GL   
Sbjct: 402 SKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCAR 461

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            + ++A +L  EM   G+  +   + T ++ LCK G +  A  +F  +  +  + D+  Y
Sbjct: 462 DKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITY 521

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+LIDG C  G+++ A +L   +    + PN VTY+ MI G C +G+++ A  LF  M  
Sbjct: 522 NTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMAS 581

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
             V P ++T+  +++G  +    +   EL   M +  +  D    +I++  L +N  + +
Sbjct: 582 KGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDD 641

Query: 468 SLPSF 472
           +L  F
Sbjct: 642 ALRIF 646



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 167/328 (50%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V       GR++    TPDAV F +LI GLCA  +  +A  L  ++   G  P+   
Sbjct: 426 VGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIF 485

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + TL+N LC+      A N+F+ M        V  + + +TY T+IDG C  G VD+A +
Sbjct: 486 FNTLLNHLCKEGMVARAKNIFDLMVR------VDVQRDVITYNTLIDGYCLHGKVDEAAK 539

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M    +KPN VTY ++I G+C      +A  LF +M  +GV P +VT++ I+  L 
Sbjct: 540 LLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLF 599

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  +   A  L   MI+ G++ D  TYN +L G C     + A  +F ++  +       
Sbjct: 600 QARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENR 659

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++I+I+   K    + A  L++ +L++G+ P+VV +  +   L E   +E    LF  +
Sbjct: 660 TFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSL 719

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           ++NG  A++      +  L + G + +A
Sbjct: 720 EKNGCTANSRMLNALVGKLLQKGEVRKA 747



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 183/438 (41%), Gaps = 77/438 (17%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKA-------------------KELLLQMKDKN-------- 129
           PN +TY+ +ID   + G +D A                     LL  + DK         
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 130 ---------IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM-----DQGVQPNVVTFNVI 175
                      PNV +YT +++G C      +A  L   MM       G  P+VV++N +
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208

Query: 176 MDELCKNGK-MDEASRLLDLMIQHGVRPDAFTY--------------------------- 207
           ++ L + G+ +D A  L D M+  G+ PD  TY                           
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268

Query: 208 --------NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
                   N+LL G+C +G+ N A  +F  M   G +  VF+Y+ L+   CKN     A 
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++  M+ +G KP+   + TL  G      + +   L D M RNG+  D + +   I   
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY 388

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K+G + +A+ LF  +R      D   Y  ++D LC  G+++ A+  F  L    L P+ 
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDA 448

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           V +  +I GLC   + DKA +L ++M    + PN I F+ L+    +    ++   +   
Sbjct: 449 VVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDL 508

Query: 440 MKEINVMPDASIVSIVVD 457
           M  ++V  D    + ++D
Sbjct: 509 MVRVDVQRDVITYNTLID 526



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 159/307 (51%), Gaps = 11/307 (3%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V PN++T++V++D   + G +D A   L  +I+ G   +A T++ LL   C   R + A 
Sbjct: 87  VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146

Query: 225 ELFV-SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML-----SKGIKPDVVIHN 278
           ++ +  M  +GC   VFSY+IL+ G C     + AL L   M+       G  PDVV +N
Sbjct: 147 DIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYN 206

Query: 279 TLFVGLF-EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           T+  GL  E  Q++ A+ LFD+M   G++ D  TY + I  L K   + +A  +   +R+
Sbjct: 207 TVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVL--VRM 264

Query: 338 LK--CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +K     +   +NSL+ G C SG+   A+ +F+ +    + P+V TY+ ++G LC +G+ 
Sbjct: 265 VKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRS 324

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            +AR +F  M +    PN  T+  L+ G+       K+  LL  M    + PD  I +I+
Sbjct: 325 MEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNIL 384

Query: 456 VDLLAKN 462
           +    K+
Sbjct: 385 IGTYTKH 391


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 161/506 (31%), Positives = 259/506 (51%), Gaps = 52/506 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+AV++T L++ LCA+    +A  L   +R  G   DV TY TL+ GLC  +    A+ L
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM     E G+  EPN V Y++++ G CK G  +   ++ ++M +K I+P+VV YT +
Sbjct: 173 MGEMC----ESGI--EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGL 226

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      +A  +   M+ +G++PNVVT+NV+++ +CK G + EA  +L  M + GV
Sbjct: 227 IDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGV 286

Query: 201 RPDAFTYNTLL-------------------------------------DGFCLTGRVNHA 223
            PD  TYNTL+                                      G C  GR+  A
Sbjct: 287 APDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQA 346

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            ++   ME  GC   + +Y++LI G  +  ++  A+ L  EM S G++PD   ++ L  G
Sbjct: 347 FQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKG 406

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
             ++ QV+RA  L   M+  G+  + + Y   +  +C+ G +  A  LF+ +       D
Sbjct: 407 FCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLD 465

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           + AY+++I G CK+G L+ A EL +S+    L P+ VTYSI+I      G M+ A  +  
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS-IVVDLLAKN 462
            M  +  +P+V  FD LI+G+    E +KV+EL+ +M   N+  D+ I+S +   L+A N
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASN 585

Query: 463 EIS--LNSLPSFTVHEQQEEVDESNV 486
           E    L SLP F+      E+ + N+
Sbjct: 586 EGKALLQSLPDFSA-----EISKGNI 606



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 218/442 (49%), Gaps = 39/442 (8%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D  +Y T++  LCR  H   A  L   M+    E    C PN V+YT ++  LC +   D
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSL---EPHPACRPNAVSYTVLMRALCADRLAD 132

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  LL  M+   ++ +VVTY ++IRG C A + ++A  L  EM + G++PNVV ++ ++
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              CK+G+ ++  ++   M + G+ PD   Y  L+D  C  G+   A  +   M   G +
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +Y++LIN  CK   ++ A+ +  +M  KG+ PDVV +NTL  GL ++ +++ A  L
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312

Query: 297 FDEMQR--NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            +EM R  N V  +  T+ + I GLC  G + +A ++   +    C  ++  YN LI GL
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP-- 412
            +  ++  A+EL   +    L P+  TYSI+I G C   Q+D+A DL   M +  + P  
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432

Query: 413 --------------------------------NVITFDMLIRGFIRINEPSKVIELLHKM 440
                                           +V+ +  +I G  +  +     ELL  +
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
            +  + PDA   SIV+++ AK+
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKS 514



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 174/371 (46%), Gaps = 8/371 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      V+  +++    P+ VT+  LI  +C E  + EA  +  K+   G  PDV T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+ GL        A+ L EEM  G      + +PN VT+ ++I GLC  G + +A +
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKN----IVKPNVVTFNSVIQGLCDIGRMRQAFQ 348

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M++     N+VTY  +I G        +A  L  EM   G++P+  T+++++   C
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++D A  LL  M   G+ P+ F Y  LL   C  G +  A+ LF  M++      V 
Sbjct: 409 KMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVV 467

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS +I+G CK  +++ A  L   ++ +G+ PD V ++ +     +   +E A  +  +M
Sbjct: 468 AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G   D   + + I G    G I + +EL   +       D +  ++L   L  S   
Sbjct: 528 TASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNE- 586

Query: 361 EIALELFRSLP 371
                L +SLP
Sbjct: 587 --GKALLQSLP 595



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 118/267 (44%), Gaps = 41/267 (15%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME---SMGCKHTVFS 241
           + EA+ LLD +    VR DA +YNT+L   C  G  + A  L  +M       C+    S
Sbjct: 61  LGEATSLLDAL--PSVR-DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++L+   C ++                                     ++A  L   M+
Sbjct: 118 YTVLMRALCADR-----------------------------------LADQAVGLLRSMR 142

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV AD  TY T I GLC    + +AVEL   +     E ++  Y+SL+ G CKSGR E
Sbjct: 143 SAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWE 202

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
              ++F  +    + P+VV Y+ +I  LC  G+  KA  +   M    + PNV+T+++LI
Sbjct: 203 DVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLI 262

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
               +     + I +L KM E  V PD
Sbjct: 263 NCMCKEGSVKEAIGVLKKMSEKGVAPD 289


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 142/393 (36%), Positives = 222/393 (56%), Gaps = 7/393 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + D  +FT LI   C  SR+  A ++  K+   G +P + T+ +L++G C  +    A +
Sbjct: 97  SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYT 138
           L   M           EPN V Y T+ID LCK G V+ A ELL +M+ K  +  ++VTY 
Sbjct: 157 LVASMVKSG------YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYN 210

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +++ G CY+ +W +A R+  +M  + + P+V TF  ++D   K G +DEA  L   M+Q 
Sbjct: 211 TLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            + P+  TYN+L++G C+ GR+ HAK+ F  M S GC   V +Y+ LING+CK++ +E  
Sbjct: 271 SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDG 330

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           + L+  M  +G+  D   +NTL  G  ++ ++  A  +F  M   GV  D  T+   + G
Sbjct: 331 MKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHG 390

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LC NG I  A+  F+ +R  +    I AYN +I GLCK+ ++E A ELF  LP   + P+
Sbjct: 391 LCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPD 450

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
             TY+IMI GLC +G   +A +LF  M+E+ ++
Sbjct: 451 ARTYTIMILGLCKNGPRREADELFRRMKEDGII 483



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 144/403 (35%), Positives = 224/403 (55%), Gaps = 6/403 (1%)

Query: 20   TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            + D  +FT LI   C  SR   A AL  K+   G +P + T  +L+NG C+ +    A++
Sbjct: 647  SHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVS 706

Query: 80   LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            L + MA    E G+  EPN V Y T+I+GLCK   ++ A E+   M+ K I  + VTY +
Sbjct: 707  LVDSMA----ELGL--EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760

Query: 140  VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            +I G C +  W +A RL  +M+ + + PNV+ F  ++D   K G + EA  L   MI+  
Sbjct: 761  LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820

Query: 200  VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            V P+  TYN+L++GFC+ GR+  AK +F  M S GC   V +Y+ LI G+CK+K +E  +
Sbjct: 821  VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 880

Query: 260  SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             L+ EM  +G+  D   +NTL  G  +  ++  A K+F+ M   GV  D  TY   +D L
Sbjct: 881  KLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940

Query: 320  CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            C NG I +A+ +   L+  + + DI  YN +I G+C++ +++ A  LFRSL    +  + 
Sbjct: 941  CNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDA 1000

Query: 380  VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            + Y  MI GLC +G   +A  L   M+E+  +P+   +D  +R
Sbjct: 1001 IAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/356 (35%), Positives = 197/356 (55%), Gaps = 6/356 (1%)

Query: 3    RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            R S    +LG+++K  F P  VT  SL+ G C  +R  EA +L   +   G EP+V  Y 
Sbjct: 665  RFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYN 724

Query: 63   TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            T++NGLC+      AL +F  M       G+V   + VTY T+I GLC  G    A  LL
Sbjct: 725  TVINGLCKNRDLNNALEIFYGMEKK----GIV--ADAVTYNTLISGLCNSGRWTDAARLL 778

Query: 123  LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
              M  + I PNV+ +T++I  F    +  EAK L+ EM+ + V PN++T+N +++  C  
Sbjct: 779  RDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQ 838

Query: 183  GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            G++ +A  + DLM+  G  PD  TYNTL+ GFC + RV    +LF  M   G     F+Y
Sbjct: 839  GRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTY 898

Query: 243  SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
            + LI+GYC+  ++  A  +++ M+  G+ PD+V +N L   L    ++E+A  + +++Q+
Sbjct: 899  NTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 958

Query: 303  NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            N +  D  TY   I G+C+N  + EA  LF +L     + D  AY ++I GLC++G
Sbjct: 959  NQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 242/472 (51%), Gaps = 13/472 (2%)

Query: 7    GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
             F +   +L+S   P  V FT ++  +   ++      LF K+   G   D++++T L++
Sbjct: 599  AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658

Query: 67   GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
              CR S   +AL L  +M     + G   +P+ VT  ++++G C+     +A  L+  M 
Sbjct: 659  CFCRCSRFSLALALLGKMM----KLGF--QPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA 712

Query: 127  DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            +  ++PNVV Y +VI G C  +D N A  +F  M  +G+  + VT+N ++  LC +G+  
Sbjct: 713  ELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWT 772

Query: 187  EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            +A+RLL  M++  + P+   +  L+D F   G +  AK L+  M        + +Y+ LI
Sbjct: 773  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLI 832

Query: 247  NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            NG+C    +  A  ++  M+SKG  PDVV +NTL  G  +  +VE   KLF EM   G+ 
Sbjct: 833  NGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892

Query: 307  ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLEIAL 364
             D +TY T I G C+ G +  A ++F+  R++ C    DI  YN L+D LC +G++E AL
Sbjct: 893  GDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVPPDIVTYNILLDCLCNNGKIEKAL 950

Query: 365  ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
             +   L    +  +++TY+I+I G+C + ++ +A  LF  +    V  + I +  +I G 
Sbjct: 951  VMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010

Query: 425  IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
             R     +  +L  +MKE   MP   I     + L  +  SL++     VHE
Sbjct: 1011 CRNGLRREADKLCTRMKEDGFMPSERIYD---ETLRDHYTSLSAELIKAVHE 1059



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 198/368 (53%), Gaps = 5/368 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S    +LG+++K  + P  VTF SL+ G C  +RI +A +L   +   G EP+V  Y 
Sbjct: 115 RLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYN 174

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++ LC+     +AL L  EM    G        + VTY T++ GLC  G   +A  +L
Sbjct: 175 TLIDCLCKNGDVNIALELLNEMEK-KGRLAA----DLVTYNTLLTGLCYSGEWRQAARIL 229

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  + I P+V T+T++I  F    + +EA+ L+ +M+   + PN VT+N +++ LC +
Sbjct: 230 RDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMH 289

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++  A +  DLM   G  P+  TYNTL++GFC + RV    +LF  M   G     F+Y
Sbjct: 290 GRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTY 349

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GYC+  ++  A  ++S M+S G+ PD++ H  L  GL    ++  A   F++M+ 
Sbjct: 350 NTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRS 409

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
                    Y   I GLCK   + EA ELF  L +   + D R Y  +I GLCK+G    
Sbjct: 410 GEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 469

Query: 363 ALELFRSL 370
           A ELFR +
Sbjct: 470 ADELFRRM 477



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 221/431 (51%), Gaps = 9/431 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P  V FT L+  + A  R  E    F++ + +FG   D++++T L++  CR S   +AL+
Sbjct: 63  PSVVDFTRLLTAI-ANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALS 121

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  +M     + G   +P+ VT+ +++ G C    +  A  L+  M     +PNVV Y +
Sbjct: 122 ILGKMM----KLGY--DPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNT 175

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +I   C   D N A  L  EM  +G +  ++VT+N ++  LC +G+  +A+R+L  M + 
Sbjct: 176 LIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKR 235

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            + PD FT+  L+D F   G ++ A+EL+  M          +Y+ LING C +  +  A
Sbjct: 236 RINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHA 295

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
              +  M SKG  P+VV +NTL  G  +  +VE   KLF  M R G+  DT+TY T I G
Sbjct: 296 KKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHG 355

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+ G +  A ++F  +       DI  +  L+ GLC +G +  A+  F  +  G     
Sbjct: 356 YCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLG 415

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +V Y+IMI GLC   ++++A +LF  +    V P+  T+ ++I G  +     +  EL  
Sbjct: 416 IVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFR 475

Query: 439 KMKEINVMPDA 449
           +MKE  ++  A
Sbjct: 476 RMKEDGIICQA 486



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 221/423 (52%), Gaps = 8/423 (1%)

Query: 41   EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
            +A  LF ++      P +  +T ++  + + +   + + LF +M N     G+    +  
Sbjct: 598  DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMEN----LGI--SHDLY 651

Query: 101  TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            ++T +I   C+      A  LL +M     +P++VT  S++ GFC    + EA  L   M
Sbjct: 652  SFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 711

Query: 161  MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
             + G++PNVV +N +++ LCKN  ++ A  +   M + G+  DA TYNTL+ G C +GR 
Sbjct: 712  AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRW 771

Query: 221  NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
              A  L   M        V  ++ LI+ + K   +  A +LY EM+ + + P+++ +N+L
Sbjct: 772  TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831

Query: 281  FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              G     ++  A  +FD M   G   D  TY T I G CK+  + + ++LF  +     
Sbjct: 832  INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891

Query: 341  EFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D   YN+LI G C++G+L +A ++F R + CGV  P++VTY+I++  LCN+G+++KA 
Sbjct: 892  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV-PPDIVTYNILLDCLCNNGKIEKAL 950

Query: 400  DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             +  D+++N +  ++IT++++I+G  R ++  +   L   +    V  DA     ++  L
Sbjct: 951  VMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010

Query: 460  AKN 462
             +N
Sbjct: 1011 CRN 1013



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 217/483 (44%), Gaps = 61/483 (12%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           V +  +I GLC   ++ EA  LF +L V G +PD  TYT ++ GLC+      A  LF  
Sbjct: 417 VAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRR 476

Query: 84  MANGNGEFGVVCEP-----------NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           M     E G++C+            N V+  TII    +   + ++ +L     D  +  
Sbjct: 477 MK----EDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWS 532

Query: 133 NVV-----TYTSVIRGFC-----------------------------------------Y 146
           ++V       +S ++GF                                          +
Sbjct: 533 SLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELH 592

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              +++A  LF EM+     P++V F  ++  + K  K D    L   M   G+  D ++
Sbjct: 593 CIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYS 652

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           +  L+  FC   R + A  L   M  +G + ++ +   L+NG+C+    + A+SL   M 
Sbjct: 653 FTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA 712

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G++P+VVI+NT+  GL +   +  A ++F  M++ G+ AD  TY T I GLC +G   
Sbjct: 713 ELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWT 772

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A  L   +   K + ++  + +LID   K G L  A  L++ +    + PN++TY+ +I
Sbjct: 773 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLI 832

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G C  G++  A+ +F  M      P+V+T++ LI GF +       ++L  +M    ++
Sbjct: 833 NGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892

Query: 447 PDA 449
            DA
Sbjct: 893 GDA 895



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 171/347 (49%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  L  +M      P++V +T V+        ++    LF +M + G+  ++ +F ++
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +   C+  +   A  LL  M++ G +P   T  +LL+GFC   R   A  L  SM  +G 
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V  Y+ +ING CKN+++  AL ++  M  KGI  D V +NTL  GL    +   A +
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M +  +  +   +   ID   K G ++EA  L+  +       +I  YNSLI+G C
Sbjct: 777 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             GRL  A  +F  +      P+VVTY+ +I G C   +++    LF +M    +V +  
Sbjct: 837 IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T++ LI G+ +  + +   ++ ++M +  V PD    +I++D L  N
Sbjct: 897 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNN 943



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 194/422 (45%), Gaps = 42/422 (9%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           AL+LF EM            P+ V +T ++  +      +       QM+   I  ++ +
Sbjct: 49  ALDLFLEMVQSQPL------PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYS 102

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           +T +I  FC     + A  +  +MM  G  P++VTF  ++   C   ++ +A  L+  M+
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV 162

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTVFSYSILINGYCKNKEI 255
           + G  P+   YNTL+D  C  G VN A EL   ME  G     + +Y+ L+ G C + E 
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  +  +M  + I PDV     L     +   ++ A +L+ +M ++ +  +T TY + 
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I+GLC +G +  A + F  +    C  ++  YN+LI+G CKS R+E  ++LF+ +    L
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT------------------- 416
           V +  TY+ +I G C  G++  A+D+F  M    V P++IT                   
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402

Query: 417 ----------------FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
                           ++++I G  + ++  +  EL  ++    V PDA   +I++  L 
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC 462

Query: 461 KN 462
           KN
Sbjct: 463 KN 464



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 146/277 (52%), Gaps = 6/277 (2%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GR +    +L  ++K    P+ + FT+LI     E  ++EA  L+ ++      P++ TY
Sbjct: 769  GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTY 828

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +L+NG C       A ++F+ M +        C P+ VTY T+I G CK   V+   +L
Sbjct: 829  NSLINGFCIQGRLGDAKHMFDLMVSKG------CFPDVVTYNTLITGFCKSKRVEDGMKL 882

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +M  + +  +  TY ++I G+C A   N A+++F  M+D GV P++VT+N+++D LC 
Sbjct: 883  FCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCN 942

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            NGK+++A  +++ + ++ +  D  TYN ++ G C   +V  A  LF S+   G K    +
Sbjct: 943  NGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIA 1002

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            Y  +I+G C+N     A  L + M   G  P   I++
Sbjct: 1003 YITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 1/308 (0%)

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GF ++  + +A  LF+EM+     P+VV F  ++  +    + +        M   G+  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D +++  L+  FC   R++ A  +   M  +G   ++ ++  L++G+C    I  A SL 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG-VAADTWTYRTFIDGLCK 321
           + M+  G +P+VV++NTL   L +   V  A +L +EM++ G +AAD  TY T + GLC 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           +G   +A  +   +   +   D+  + +LID   K G L+ A EL++ +    + PN VT
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ +I GLC  G++  A+  F  M      PNV+T++ LI GF +       ++L  +M 
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338

Query: 442 EINVMPDA 449
              ++ D 
Sbjct: 339 REGLVGDT 346



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 107/501 (21%), Positives = 202/501 (40%), Gaps = 66/501 (13%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV  G  +  R+ +     D  T+ +LI G C   ++  A  +F+ +   G  PD+ T+ 
Sbjct: 326 RVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHC 385

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC--------------------------- 95
            L++GLC       A+  F +M +G    G+V                            
Sbjct: 386 ILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVE 445

Query: 96  --EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI-------------KPNVVTYTSV 140
             +P+  TYT +I GLCK G   +A EL  +MK+  I               N V+  ++
Sbjct: 446 GVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTI 505

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I      +   E+  L+    D  +  ++V    I       G +    R   L+++ G 
Sbjct: 506 IICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFV----RRHLLLLERGN 561

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P++ +++            ++ + L   +  +                    + + A  
Sbjct: 562 NPESRSFSGASHHHHHHHHHHYRERLRSELHCI--------------------KFDDAFG 601

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EML     P +V    +   + ++++ +    LF +M+  G++ D +++   I   C
Sbjct: 602 LFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFC 661

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           +      A+ L   +  L  +  I    SL++G C+  R + A+ L  S+    L PNVV
Sbjct: 662 RCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVV 721

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+ +I GLC +  ++ A ++F  ME+  +V + +T++ LI G       +    LL  M
Sbjct: 722 IYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDM 781

Query: 441 KEINVMPDASIVSIVVDLLAK 461
            +  + P+    + ++D   K
Sbjct: 782 VKRKIDPNVIFFTALIDTFVK 802



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 1/219 (0%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L  G+  +   E AL L+ EM+     P VV    L   +  + + E       +M+  G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           ++ D +++   I   C+   +  A+ +   +  L  +  I  + SL+ G C   R+  A 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA-VVPNVITFDMLIRG 423
            L  S+      PNVV Y+ +I  LC +G ++ A +L  +ME+   +  +++T++ L+ G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                E  +   +L  M +  + PD    + ++D   K 
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQ 254


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 137/391 (35%), Positives = 216/391 (55%), Gaps = 6/391 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA T+ +LI+GLC   R   A A+   +   GC PDV TYT L+   C+ S    A+ L
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM +        C P+ VTY  +++G+C+EG V+ A E L  +     +PN V+Y  V
Sbjct: 224 LDEMHDKG------CAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIV 277

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G   A+ W +A++L  EM  +G  PNVVTFN+++  LC+ G ++ A  +L+ M Q+G 
Sbjct: 278 LKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGC 337

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P++ +YN LL  FC   +++ A E    M S GC   + SY+ L+   C+N E++ A+ 
Sbjct: 338 TPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIE 397

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  ++  KG  P ++ +NT+  GL +  + + A +L DEM   G+  D  TY T   GLC
Sbjct: 398 LLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLC 457

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           +   I EAV  F  ++ +        YN+++ GLCK      A++LF  +     +PN  
Sbjct: 458 REDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNES 517

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           TY+I++ GL  +G + +AR+LF  +    VV
Sbjct: 518 TYTILVEGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 223/443 (50%), Gaps = 17/443 (3%)

Query: 20  TPDAV-TFTSLIKGLCAESRIMEAAALFTKLRVFGCE-PDVFTYTTLVNGLCRTSHTIVA 77
           +P AV    +LIK LCA  R  +A       RV     PDV  Y  +V G C       A
Sbjct: 100 SPAAVGPCAALIKKLCASGRTADAR------RVLAASGPDVMVYNAMVAGYCGAGQLDAA 153

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
             L  +M           EP+  TY T+I GLC  G    A  +L  M  +   P+VVTY
Sbjct: 154 RRLVADMP---------VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTY 204

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           T ++   C    + +A +L  EM D+G  P++VT+NV+++ +C+ G++++A   L  +  
Sbjct: 205 TILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPS 264

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +G  P+  +YN +L G     R   A++L   M   GC   V ++++LI+  C+   +E 
Sbjct: 265 YGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEP 324

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A+ +  +M   G  P+ + +N L     +  ++ +A +  + M   G   D  +Y T + 
Sbjct: 325 AMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLT 384

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC+NG +  A+EL H L+   C   + +YN++IDGL K+G+ + ALEL   +    L P
Sbjct: 385 ALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQP 444

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +++TYS +  GLC + ++++A   F  +++  + P    ++ ++ G  +  E    I+L 
Sbjct: 445 DIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLF 504

Query: 438 HKMKEINVMPDASIVSIVVDLLA 460
             M     MP+ S  +I+V+ LA
Sbjct: 505 AYMISSGCMPNESTYTILVEGLA 527



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 189/369 (51%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S+   VL  + +    PD VT+T L++  C  S   +A  L  ++   GC PD+ TY
Sbjct: 180 GRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTY 239

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NG+C+      A+   + + +    +G  CEPNTV+Y  ++ GL      + A++L
Sbjct: 240 NVVLNGICQEGRVEDAMEFLKNLPS----YG--CEPNTVSYNIVLKGLFTAERWEDAEKL 293

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M  K   PNVVT+  +I   C       A  +  +M   G  PN +++N ++   CK
Sbjct: 294 MEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCK 353

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+ +A   ++LM+  G  PD  +YNTLL   C  G V+ A EL   ++  GC   + S
Sbjct: 354 QKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLIS 413

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K  + + AL L  EM SKG++PD++ ++T+  GL    ++E A + F ++Q
Sbjct: 414 YNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQ 473

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+      Y   + GLCK      A++LF  +    C  +   Y  L++GL   G ++
Sbjct: 474 DMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVK 533

Query: 362 IALELFRSL 370
            A ELF  L
Sbjct: 534 EARELFAQL 542



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 205/412 (49%), Gaps = 14/412 (3%)

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+  LC +  T  A  +    A+G         P+ + Y  ++ G C  G +D A+ L
Sbjct: 108 AALIKKLCASGRTADARRVLA--ASG---------PDVMVYNAMVAGYCGAGQLDAARRL 156

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M    ++P+  TY ++IRG C     + A  +  +M  +G  P+VVT+ ++++  CK
Sbjct: 157 VADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCK 213

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
                +A +LLD M   G  PD  TYN +L+G C  GRV  A E   ++ S GC+    S
Sbjct: 214 RSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVS 273

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I++ G    +  E A  L  EM  KG  P+VV  N L   L     VE A ++ ++M 
Sbjct: 274 YNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMP 333

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G   ++ +Y   +   CK   I +A+E    +    C  DI +YN+L+  LC++G ++
Sbjct: 334 QYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVD 393

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A+EL   L      P +++Y+ +I GL   G+  +A +L  +M    + P++IT+  + 
Sbjct: 394 VAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIA 453

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
            G  R +   + +    K++++ + P A++ + ++  L K   + N++  F 
Sbjct: 454 SGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFA 505


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 153/428 (35%), Positives = 227/428 (53%), Gaps = 7/428 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT   L+ G C E RI E  +   ++   G  PD FT+ +LVNGLCR  H   AL + + 
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M           +P+  TY ++I GLCK G V++A E+L QM  ++  PN VTY ++I  
Sbjct: 342 MLQEG------FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIST 395

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C      EA  L   +  +G+ P+V TFN ++  LC       A  L + M   G  PD
Sbjct: 396 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPD 455

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
            FTYN L+D  C  GR+  A  L   MES GC   V +Y+ LI+G+CKNK IE A  ++ 
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFD 515

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM  +GI  +VV +NTL  GL +  +VE A +L D+M   G+  D +TY + +   C+ G
Sbjct: 516 EMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            I +A ++  T+    CE D   Y +LI GL K+GR+E+A  L R++    +V    TY+
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYN 635

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP-SKVIELLHKMKE 442
            +I  L  + +  +A  LF +M E    P+ +T+ ++ RG      P  + ++ L +M +
Sbjct: 636 PVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTD 695

Query: 443 INVMPDAS 450
              +PD S
Sbjct: 696 KGFLPDFS 703



 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 154/460 (33%), Positives = 240/460 (52%), Gaps = 10/460 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+      +  +    F PD  TF SL+ GLC    +  A  +   +   G +PD+FTY
Sbjct: 295 GRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTY 354

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ GLC+      A+ +  +M   +        PNTVTY T+I  LCKE  V++A EL
Sbjct: 355 NSLIFGLCKLGEVEEAVEILNQMILRD------FSPNTVTYNTLISTLCKENQVEEATEL 408

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K I P+V T+ S+I+G C   +   A  LF EM  +G  P+  T+N+++D LC 
Sbjct: 409 ARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCS 468

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++EA  LL  M   G   +  TYNTL+DGFC   R+  A+E+F  ME  G    V +
Sbjct: 469 RGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVT 528

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G CKN+ +E A  L  +ML +G+KPD   +N+L         +++A  +   M 
Sbjct: 529 YNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMT 588

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   D+ TY T I GL K G +  A  L  T+++       + YN +I  L +  R  
Sbjct: 589 SNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTS 648

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCN-DGQMDKARDLFLDMEENAVVPNVITFDML 420
            A+ LFR +      P+ VTY ++  GLC+  G + +A D  ++M +   +P+  +F ML
Sbjct: 649 EAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLML 708

Query: 421 IRGFIRINEPSKVIELLHK-MKEINVMPDASIVSIVVDLL 459
             G   ++    +I+L+++ MK+ N     S VS+++  L
Sbjct: 709 AEGLCALSMEDTLIKLVNRVMKQANF--SDSEVSMIMGFL 746



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/437 (31%), Positives = 231/437 (52%), Gaps = 6/437 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +PD  TFT+L++G   E  +  A  +  ++   GC     T   LV+G C+       L
Sbjct: 242 LSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVL 301

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +  +EM+N          P+  T+ ++++GLC+ G V  A E+L  M  +   P++ TY 
Sbjct: 302 SFIDEMSNEG------FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYN 355

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I G C   +  EA  +  +M+ +   PN VT+N ++  LCK  +++EA+ L  ++   
Sbjct: 356 SLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSK 415

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  T+N+L+ G CLT     A ELF  M++ GC    F+Y++LI+  C    +E A
Sbjct: 416 GILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEA 475

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           LSL  EM S G   +VV +NTL  G  +  ++E A ++FDEM+  G++ +  TY T IDG
Sbjct: 476 LSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDG 535

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCKN  + EA +L   + +   + D   YNSL+   C++G ++ A ++ +++      P+
Sbjct: 536 LCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPD 595

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VTY  +I GL   G+++ A  L   ++   +V    T++ +I+   R    S+ + L  
Sbjct: 596 SVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFR 655

Query: 439 KMKEINVMPDASIVSIV 455
           +M E    PDA    +V
Sbjct: 656 EMMEKGDPPDAVTYKVV 672



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 138/440 (31%), Positives = 224/440 (50%), Gaps = 6/440 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           DA T+  L+  L   +++     + +++   G +PDV T+  L+  LCR      A+ + 
Sbjct: 175 DAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMM 234

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM    G +G+   P+  T+TT++ G  +EG ++ A  +  QM       + VT   ++
Sbjct: 235 EEM----GSYGL--SPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLV 288

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C      E      EM ++G +P+  TFN +++ LC+ G +  A  +LD+M+Q G  
Sbjct: 289 HGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFD 348

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD FTYN+L+ G C  G V  A E+   M          +Y+ LI+  CK  ++E A  L
Sbjct: 349 PDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL 408

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              + SKGI PDV   N+L  GL   +    A +LF+EM+  G   D +TY   ID LC 
Sbjct: 409 ARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCS 468

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA+ L   +    C  ++  YN+LIDG CK+ R+E A E+F  +    +  NVVT
Sbjct: 469 RGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVT 528

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ +I GLC + ++++A  L   M    + P+  T++ L+  F R  +  K  +++  M 
Sbjct: 529 YNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMT 588

Query: 442 EINVMPDASIVSIVVDLLAK 461
                PD+     ++  L+K
Sbjct: 589 SNGCEPDSVTYGTLILGLSK 608



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/356 (36%), Positives = 192/356 (53%), Gaps = 7/356 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V     +L +++   F+P+ VT+ +LI  LC E+++ EA  L   L   G  PDV T
Sbjct: 364 LGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 423

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +L+ GLC T++  +A+ LFEEM          C P+  TY  +ID LC  G +++A  
Sbjct: 424 FNSLIQGLCLTNNHRLAMELFEEMKTKG------CHPDEFTYNMLIDSLCSRGRLEEALS 477

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M+      NVVTY ++I GFC  K   EA+ +F EM  QG+  NVVT+N ++D LC
Sbjct: 478 LLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLC 537

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN +++EA++L+D M+  G++PD FTYN+LL  FC  G +  A ++  +M S GC+    
Sbjct: 538 KNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSV 597

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI G  K   +E A  L   +  KG+      +N +   LF   +   A +LF EM
Sbjct: 598 TYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREM 657

Query: 301 QRNGVAADTWTYRTFIDGLCK-NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
              G   D  TY+    GLC   G I EAV+    +       D  ++  L +GLC
Sbjct: 658 MEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC 713



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 210/397 (52%), Gaps = 6/397 (1%)

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
           FG + D FTY  L+N L   +     L L E + +     G+  +P+  T+  +I  LC+
Sbjct: 170 FGLKLDAFTYNFLLNVLVDGNK----LKLVEIVNSRMVSRGI--KPDVTTFNILIKALCR 223

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
              +  A  ++ +M    + P+  T+T++++GF    + N A R+  +M+  G   + VT
Sbjct: 224 AHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVT 283

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
            NV++   CK G+++E    +D M   G RPD FT+N+L++G C  G V HA E+   M 
Sbjct: 284 VNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVML 343

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G    +F+Y+ LI G CK  E+E A+ + ++M+ +   P+ V +NTL   L + +QVE
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVE 403

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +L   +   G+  D  T+ + I GLC       A+ELF  ++   C  D   YN LI
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLI 463

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           D LC  GRLE AL L + +       NVVTY+ +I G C + ++++A ++F +ME   + 
Sbjct: 464 DSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            NV+T++ LI G  +     +  +L+ +M    + PD
Sbjct: 524 RNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPD 560



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 216/447 (48%), Gaps = 11/447 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS---HTI 75
           F P +V +  +++ L  +        +  +++  GCE    T+  L+    +       +
Sbjct: 101 FVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAV 160

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
             +++ EE      EFG+  + +  TY  +++ L     +   + +  +M  + IKP+V 
Sbjct: 161 AVVDIMEE------EFGL--KLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVT 212

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T+  +I+  C A     A  +  EM   G+ P+  TF  +M    + G M+ A R+ + M
Sbjct: 213 TFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQM 272

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +  G      T N L+ G+C  GR+         M + G +   F+++ L+NG C+   +
Sbjct: 273 VAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHV 332

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + AL +   ML +G  PD+  +N+L  GL ++ +VE A ++ ++M     + +T TY T 
Sbjct: 333 KHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTL 392

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I  LCK   + EA EL   L       D+  +NSLI GLC +    +A+ELF  +     
Sbjct: 393 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGC 452

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+  TY+++I  LC+ G++++A  L  +ME +    NV+T++ LI GF +     +  E
Sbjct: 453 HPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEE 512

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKN 462
           +  +M+   +  +    + ++D L KN
Sbjct: 513 IFDEMELQGISRNVVTYNTLIDGLCKN 539



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 194/373 (52%), Gaps = 7/373 (1%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEA 153
           CE    T+  +I+   K    D+A  ++  M+++  +K +  TY  ++       D N+ 
Sbjct: 136 CEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLV---DGNKL 192

Query: 154 KRLFI---EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           K + I    M+ +G++P+V TFN+++  LC+  ++  A  +++ M  +G+ PD  T+ TL
Sbjct: 193 KLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTL 252

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           + GF   G +N A  +   M + GC  +  + ++L++GYCK   IE  LS   EM ++G 
Sbjct: 253 MQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGF 312

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +PD    N+L  GL  I  V+ A ++ D M + G   D +TY + I GLCK G + EAVE
Sbjct: 313 RPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVE 372

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           + + + +     +   YN+LI  LCK  ++E A EL R L    ++P+V T++ +I GLC
Sbjct: 373 ILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 432

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
                  A +LF +M+     P+  T++MLI          + + LL +M+      +  
Sbjct: 433 LTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVV 492

Query: 451 IVSIVVDLLAKNE 463
             + ++D   KN+
Sbjct: 493 TYNTLIDGFCKNK 505



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 183/400 (45%), Gaps = 37/400 (9%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELL-LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           P   T   + D L ++   D   +LL    K  N  P+ V Y  V+R       +   +R
Sbjct: 67  PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH-GVRPDAFTYNTLLDGF 214
           +  EM   G +    TF ++++   K    DEA  ++D+M +  G++ DAFTYN LL+  
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
               ++   + +   M S G K  V +++ILI   C+  +I  A+ +  EM S G+ PD 
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246

Query: 275 VIHNTLFVGLFE-----------------------------IH------QVERAFKLFDE 299
               TL  G  E                             +H      ++E      DE
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G   D +T+ + ++GLC+ G++  A+E+   +     + DI  YNSLI GLCK G 
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +E A+E+   +      PN VTY+ +I  LC + Q+++A +L   +    ++P+V TF+ 
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           LI+G    N     +EL  +MK     PD    ++++D L
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 161/506 (31%), Positives = 259/506 (51%), Gaps = 52/506 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+AV++T L++ LCA+    +A  L   +R  G   DV TY TL+ GLC  +    A+ L
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM     E G+  EPN V Y++++ G CK G  +   ++ ++M +K I+P+VV YT +
Sbjct: 173 MGEMC----ESGI--EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGL 226

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      +A  +   M+ +G++PNVVT+NV+++ +CK G + EA  +L  M + GV
Sbjct: 227 IDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGV 286

Query: 201 RPDAFTYNTLL-------------------------------------DGFCLTGRVNHA 223
            PD  TYNTL+                                      G C  GR+  A
Sbjct: 287 APDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQA 346

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            ++   ME  GC   + +Y++LI G  +  ++  A+ L  EM S G++PD   ++ L  G
Sbjct: 347 FQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKG 406

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
             ++ QV+RA  L   M+  G+  + + Y   +  +C+ G +  A  LF+ +       D
Sbjct: 407 FCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLD 465

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           + AY+++I G CK+G L+ A EL +S+    L P+ VTYSI+I      G M+ A  +  
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS-IVVDLLAKN 462
            M  +  +P+V  FD LI+G+    E +KV+EL+ +M   N+  D+ I+S +   L+A N
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASN 585

Query: 463 EIS--LNSLPSFTVHEQQEEVDESNV 486
           E    L SLP F+      E+ + N+
Sbjct: 586 EGKALLQSLPDFSA-----EISKGNI 606



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 218/442 (49%), Gaps = 39/442 (8%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D  +Y T++  LCR  H   A  L   M+    E    C PN V+YT ++  LC +   D
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSL---EPHPACRPNAVSYTVLMRALCADRLAD 132

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  LL  M+   ++ +VVTY ++IRG C A + ++A  L  EM + G++PNVV ++ ++
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              CK+G+ ++  ++   M + G+ PD   Y  L+D  C  G+   A  +   M   G +
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +Y++LIN  CK   ++ A+ +  +M  KG+ PDVV +NTL  GL ++ +++ A  L
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312

Query: 297 FDEMQR--NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            +EM R  N V  +  T+ + I GLC  G + +A ++   +    C  ++  YN LI GL
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP-- 412
            +  ++  A+EL   +    L P+  TYSI+I G C   Q+D+A DL   M +  + P  
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432

Query: 413 --------------------------------NVITFDMLIRGFIRINEPSKVIELLHKM 440
                                           +V+ +  +I G  +  +     ELL  +
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
            +  + PDA   SIV+++ AK+
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKS 514



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 174/371 (46%), Gaps = 8/371 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      V+  +++    P+ VT+  LI  +C E  + EA  +  K+   G  PDV T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+ GL        A+ L EEM  G      + +PN VT+ ++I GLC  G + +A +
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKN----IVKPNVVTFNSVIQGLCDIGRMRQAFQ 348

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M++     N+VTY  +I G        +A  L  EM   G++P+  T+++++   C
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++D A  LL  M   G+ P+ F Y  LL   C  G +  A+ LF  M++      V 
Sbjct: 409 KMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVV 467

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS +I+G CK  +++ A  L   ++ +G+ PD V ++ +     +   +E A  +  +M
Sbjct: 468 AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G   D   + + I G    G I + +EL   +       D +  ++L   L  S   
Sbjct: 528 TASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNE- 586

Query: 361 EIALELFRSLP 371
                L +SLP
Sbjct: 587 --GKALLQSLP 595



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 118/267 (44%), Gaps = 41/267 (15%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME---SMGCKHTVFS 241
           + EA+ LLD +    VR DA +YNT+L   C  G  + A  L  +M       C+    S
Sbjct: 61  LGEATSLLDAL--PSVR-DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++L+   C ++                                     ++A  L   M+
Sbjct: 118 YTVLMRALCADR-----------------------------------LADQAVGLLRSMR 142

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV AD  TY T I GLC    + +AVEL   +     E ++  Y+SL+ G CKSGR E
Sbjct: 143 SAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWE 202

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
              ++F  +    + P+VV Y+ +I  LC  G+  KA  +   M    + PNV+T+++LI
Sbjct: 203 DVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLI 262

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
               +     + I +L KM E  V PD
Sbjct: 263 NCMCKEGSVKEAIGVLKKMSEKGVAPD 289


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 164/510 (32%), Positives = 250/510 (49%), Gaps = 35/510 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     V   +++    PD  T+T L+ G C + R  EA  +F  +   G  P+ FTY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC-------------------------- 95
           T L++G  +  +   AL + +EM     +  VV                           
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 96  ---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              EP+T TY  +IDG  K   + KA ELL +MK + + P+  TY+ +I G C++ D  +
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  +  +M+  GV+PNV  +  ++    +  + + A  LL +MI +GV PD F YN L+ 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C   +V  AK L V M   G K    +Y   IN Y K+ EI+ A   + +MLS GI P
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           + VI+  L  G  ++     A   F  M   G+  D   Y   I  L KNG   EA+ +F
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 333 HTLRILKCEF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
             L+ LK     D+  YNSLI G CK G +E A +L+  +    + PN+V Y+ +I GLC
Sbjct: 650 --LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLC 707

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             G++ KAR+LF ++EE  +VP+V+T+  +I G+ +    ++  +L  +M    + PD  
Sbjct: 708 KLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY 767

Query: 451 IVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           I  I++D   K      +L  F  HE Q++
Sbjct: 768 IYCILIDGCGKEGNLEKALSLF--HEAQQK 795



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/460 (34%), Positives = 236/460 (51%), Gaps = 7/460 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL +++++   P+   + +LIK    ESR   A  L   +   G  PD+F Y  L+ GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R      A  L  +M    GE G+  +PN  TY   I+   K G +  A+     M    
Sbjct: 533 RAKKVEEAKMLLVDM----GEKGI--KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I PN V YT +I+G C   +  EA   F  M+++G+ P++  ++ I+  L KNGK  EA 
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +    ++ GV PD F YN+L+ GFC  G +  A +L+  M   G    +  Y+ LING 
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGL 706

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK  E+  A  L+ E+  K + PDVV ++T+  G  +   +  AFKLFDEM   G++ D 
Sbjct: 707 CKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDG 766

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           + Y   IDG  K G + +A+ LFH  +  K    + A+NSLID  CK G++  A ELF  
Sbjct: 767 YIYCILIDGCGKEGNLEKALSLFHEAQ-QKSVGSLSAFNSLIDSFCKHGKVIEARELFDD 825

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    L PN+VTY+I+I        M++A  LFLDME   ++PN +T+  L+  + +I  
Sbjct: 826 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
             K+I L   M+   +  DA    ++     K   SL +L
Sbjct: 886 RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 925



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 244/493 (49%), Gaps = 44/493 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V  G +VL  + K C  P+  T+ + I GLC    + EA  +   +   G  PD  T
Sbjct: 255 VGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHT 313

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT LV+G C+   +  A  +FE M +          PN  TYT +IDG  KEG +++A  
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSG------LNPNRFTYTALIDGFIKEGNIEEALR 367

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  + +K NVVTY ++I G   A +  +A  LF EM+  G++P+  T+N+++D   
Sbjct: 368 IKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYL 427

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+  M +A  LL  M    + P  FTY+ L+ G C +  +  A E+   M   G K  VF
Sbjct: 428 KSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVF 487

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y  LI  Y +    E A+ L   M++ G+ PD+  +N L +GL    +VE A  L  +M
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELF---------------------------- 332
              G+  +  TY  FI+   K+G I  A   F                            
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607

Query: 333 -HTLRILKCEF------DIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSI 384
              L   KC        DIRAY+++I  L K+G+ + A+ +F + L  GV VP+V  Y+ 
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV-VPDVFLYNS 666

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I G C +G ++KA  L+ +M  N + PN++ ++ LI G  ++ E +K  EL  +++E +
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726

Query: 445 VMPDASIVSIVVD 457
           ++PD    S ++D
Sbjct: 727 LVPDVVTYSTIID 739



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 232/463 (50%), Gaps = 7/463 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++    +   +L +   PD  T+  LI G      + +A  L  +++     P  FTY
Sbjct: 395 GEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GLC +S    A  + ++M   NG      +PN   Y T+I    +E   + A EL
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQMIR-NG-----VKPNVFMYGTLIKAYVQESRYEMAIEL 508

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M    + P++  Y  +I G C AK   EAK L ++M ++G++PN  T+   ++   K
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++  A R    M+  G+ P+   Y  L+ G C  G    A   F  M   G    + +
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+   KN + + A+ ++ + L  G+ PDV ++N+L  G  +   +E+A +L+DEM 
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG+  +   Y T I+GLCK G + +A ELF  +       D+  Y+++IDG CKSG L 
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLT 748

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +LF  +    + P+   Y I+I G   +G ++KA  LF + ++ + V ++  F+ LI
Sbjct: 749 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLI 807

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             F +  +  +  EL   M +  + P+    +I++D   K E+
Sbjct: 808 DSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEM 850



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 231/440 (52%), Gaps = 9/440 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V G ++++   PD  T+T++IK  C    +++   + +++    C+P++FTY   + GLC
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLC 287

Query: 70  RTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           +T     AL + +  M  G G       P+  TYT ++DG CK+    +AK +   M   
Sbjct: 288 QTGAVDEALEVKKLMMEKGLG-------PDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            + PN  TYT++I GF    +  EA R+  EM+ +G++ NVVT+N ++  + K G+M +A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L + M+  G+ PD +TYN L+DG+  +  +  A EL   M++     + F+YS+LI+G
Sbjct: 401 MSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C + +++ A  +  +M+  G+KP+V ++ TL     +  + E A +L   M  NGV  D
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            + Y   I GLC+   + EA  L   +     + +   Y + I+   KSG +++A   F+
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    +VPN V Y+I+I G C+ G   +A   F  M E  ++P++  +  +I    +  
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640

Query: 429 EPSKVIELLHKMKEINVMPD 448
           +  + + +  K  +  V+PD
Sbjct: 641 KTKEAMGVFLKFLKTGVVPD 660



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 238/464 (51%), Gaps = 23/464 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD   +  LI GLC   ++ EA  L   +   G +P+  TY   +N   ++    VA   
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F++M +     G+V  PN V YT +I G C  G   +A      M +K + P++  Y+++
Sbjct: 579 FKDMLSS----GIV--PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I          EA  +F++ +  GV P+V  +N ++   CK G +++AS+L D M+ +G+
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+   YNTL++G C  G V  A+ELF  +E       V +YS +I+GYCK+  +  A  
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM+SKGI PD  I+  L  G  +   +E+A  LF E Q+  V + +  + + ID  C
Sbjct: 753 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFC 811

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+G ++EA ELF  +   K   +I  Y  LID   K+  +E A +LF  +    ++PN +
Sbjct: 812 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 871

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK- 439
           TY+ ++      G   K   LF DME   +  + I + ++   + +  +  + ++LL+K 
Sbjct: 872 TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 931

Query: 440 ----MKEINVMPDASI--------VSIVVDLLA---KNEISLNS 468
               +K  + + DA I        +S V++LL+   K E+SL+S
Sbjct: 932 LVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSS 975



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 202/407 (49%), Gaps = 7/407 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PDV+TYT ++   C+    I    +  EM          C+PN  TY   I GLC+ G V
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-------CKPNLFTYNAFIGGLCQTGAV 292

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A E+   M +K + P+  TYT ++ GFC  K   EAK +F  M   G+ PN  T+  +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D   K G ++EA R+ D MI  G++ +  TYN ++ G    G +  A  LF  M   G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +   ++Y++LI+GY K+ ++  A  L +EM ++ + P    ++ L  GL     +++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + D+M RNGV  + + Y T I    +      A+EL   +       D+  YN LI GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           ++ ++E A  L   +    + PN  TY   I      G++  A   F DM  + +VPN +
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + +LI+G   +    + +     M E  ++PD    S ++  L+KN
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 211/404 (52%), Gaps = 7/404 (1%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            +L+    PD   ++++I  L    +  EA  +F K    G  PDVF Y +L++G C+   
Sbjct: 617  MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
               A  L++EM + NG       PN V Y T+I+GLCK G V KA+EL  ++++K++ P+
Sbjct: 677  IEKASQLYDEMLH-NG-----INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPD 730

Query: 134  VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            VVTY+++I G+C + +  EA +LF EM+ +G+ P+   + +++D   K G +++A  L  
Sbjct: 731  VVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFH 790

Query: 194  LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
               Q  V   +  +N+L+D FC  G+V  A+ELF  M        + +Y+ILI+ Y K +
Sbjct: 791  EAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 849

Query: 254  EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
             +E A  L+ +M ++ I P+ + + +L +   +I    +   LF +M+  G+A D   Y 
Sbjct: 850  MMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYG 909

Query: 314  TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
                  CK G  +EA++L +   +   + +   +++LI  LCK  ++   LEL   +   
Sbjct: 910  VMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKE 969

Query: 374  VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
             L  +  T + ++ G    G  D+A  +   M+    VP  ++ 
Sbjct: 970  ELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSL 1013



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/339 (33%), Positives = 181/339 (53%), Gaps = 1/339 (0%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M +  I P+V TYT+VI+  C   D  + K +  EM ++  +PN+ T+N  +  LC+ G
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTG 290

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +DEA  +  LM++ G+ PD  TY  L+DGFC   R   AK +F SM S G     F+Y+
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G+ K   IE AL +  EM+++G+K +VV +N +  G+ +  ++ +A  LF+EM   
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  DTWTY   IDG  K+  + +A EL   ++  K       Y+ LI GLC S  L+ A
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            E+   +    + PNV  Y  +I     + + + A +L   M  N V+P++  ++ LI G
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             R  +  +   LL  M E  + P+A      ++L +K+
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 226/439 (51%), Gaps = 13/439 (2%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            +L S   P+ V +T LIKG C     +EA + F  +   G  PD+  Y+ +++ L +   
Sbjct: 582  MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
            T  A+ +F +      + GVV  P+   Y ++I G CKEG ++KA +L  +M    I PN
Sbjct: 642  TKEAMGVFLKFL----KTGVV--PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695

Query: 134  VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            +V Y ++I G C   +  +A+ LF E+ ++ + P+VVT++ I+D  CK+G + EA +L D
Sbjct: 696  IVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFD 755

Query: 194  LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF--VSMESMGCKHTVFSYSILINGYCK 251
             MI  G+ PD + Y  L+DG    G +  A  LF     +S+G   ++ +++ LI+ +CK
Sbjct: 756  EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG---SLSAFNSLIDSFCK 812

Query: 252  NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            + ++  A  L+ +M+ K + P++V +  L     +   +E A +LF +M+   +  +T T
Sbjct: 813  HGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLT 872

Query: 312  YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSL 370
            Y + +    + G   + + LF  +       D  AY  +    CK G+   AL+L  +SL
Sbjct: 873  YTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSL 932

Query: 371  PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
              G+ + + V +  +I  LC + Q+    +L  +M +  +  +  T + L+ GF +    
Sbjct: 933  VEGIKLEDDV-FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE 991

Query: 431  SKVIELLHKMKEINVMPDA 449
             +  ++L  M+ +  +P +
Sbjct: 992  DEASKVLGVMQRLGWVPTS 1010



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 172/399 (43%), Gaps = 51/399 (12%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP-----------------NVVTYTSVIRG 143
           +Y+ +   LC  G + +A  +L ++      P                 N+  +   I  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           F      NEA  +FI  + +G  P ++  N +M +L K   M    ++   M++  + PD
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 204 AFTY----------------------------------NTLLDGFCLTGRVNHAKELFVS 229
            +TY                                  N  + G C TG V+ A E+   
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKL 301

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G      +Y++L++G+CK K  + A  ++  M S G+ P+   +  L  G  +   
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           +E A ++ DEM   G+  +  TY   I G+ K G + +A+ LF+ + +   E D   YN 
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNL 421

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LIDG  KS  +  A EL   +    L P+  TYS++I GLC+   + KA ++   M  N 
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           V PNV  +  LI+ +++ +     IELL  M    V+PD
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 142/305 (46%), Gaps = 9/305 (2%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +G V+    +   I +    PD VT++++I G C    + EA  LF ++   G  PD + 
Sbjct: 709  LGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYI 768

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGN-GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            Y  L++G  +  +   AL+LF E    + G            + ++ID  CK G V +A+
Sbjct: 769  YCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS--------AFNSLIDSFCKHGKVIEAR 820

Query: 120  ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            EL   M DK + PN+VTYT +I  +  A+   EA++LF++M  + + PN +T+  ++   
Sbjct: 821  ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 880

Query: 180  CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
             + G   +   L   M   G+  DA  Y  +   +C  G+   A +L       G K   
Sbjct: 881  NQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLED 940

Query: 240  FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
              +  LI   CK K+I   L L SEM  + +       NTL +G ++    + A K+   
Sbjct: 941  DVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGV 1000

Query: 300  MQRNG 304
            MQR G
Sbjct: 1001 MQRLG 1005



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 27/253 (10%)

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            + S   M     + SYSIL    C +  I  A ++  ++L    KP + I ++L     
Sbjct: 107 FYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTR-KPPLEILDSLV---- 161

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD-I 344
                 R ++ F         ++   +  FID     G++ EA  +F    I +  F  +
Sbjct: 162 ------RCYREFG-------GSNLTVFDIFIDKFRVLGFLNEASSVF-IASISEGFFPTL 207

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
              N+L+  L K+  + +  +++ S+    +VP+V TY+ +I   C  G + K + +  +
Sbjct: 208 ICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSE 267

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           ME+    PN+ T++  I G  +     + +E+   M E  + PD    +++VD   K + 
Sbjct: 268 MEKECK-PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKR 326

Query: 465 S------LNSLPS 471
           S        S+PS
Sbjct: 327 SKEAKLIFESMPS 339


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 260/492 (52%), Gaps = 29/492 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +L ++  S   PD VT+  LI+  C   R  EA ++F  +   G +P+   
Sbjct: 286 LGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI 345

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFG------VVC------------------- 95
           Y  L++G       I   +L + M      F       ++C                   
Sbjct: 346 YHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMR 405

Query: 96  ----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+ V+Y+T+I  LCK G V+ A     QM  + + PN++++TS+I G C   +W 
Sbjct: 406 QNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWK 465

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           + + L  EM+++G+ P+ +  N IMD LCK G++ EA    D++I  GV+P+  +YNTL+
Sbjct: 466 KVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLI 525

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+C  G+++ + + F  M S+G +   ++Y+ L+NGY KN  +E AL+LY EM  K +K
Sbjct: 526 DGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVK 585

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
              +  N +  GLF+  ++  A +L+ +M   G      TY T + GLC+N  + EA+ +
Sbjct: 586 FCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRM 645

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  LR  + E D+  +N +I+ L K GR++ A  LF ++     VP+V+TYS+MI     
Sbjct: 646 FEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIE 705

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G ++++ DLFL ME+N    +    +++IR  +   +  +    L K+ E N   +AS 
Sbjct: 706 EGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEAST 765

Query: 452 VSIVVDLLAKNE 463
            ++++ ++++ +
Sbjct: 766 AALLIPIVSEKK 777



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 150/441 (34%), Positives = 232/441 (52%), Gaps = 6/441 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           VT   LIKGLC   R  +A  + F ++   G  PDVF+Y  L+ GLC    +  AL L  
Sbjct: 130 VTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLL 189

Query: 83  EM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            M A+G    G  C PN V+Y+TIIDG  KEG VDKA  L  +M  +   P+VVTY+S+I
Sbjct: 190 HMTADG----GYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLI 245

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C A+  N+A+ +   M D+GV PN  T+N+++   C  G+++EA RLL  M   G++
Sbjct: 246 DGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ 305

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY  L+  +C  GR   A+ +F SM   G K     Y IL++GY     +     L
Sbjct: 306 PDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 365

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              M+  GI  +    N L     +   V++A   F EM++NG+  D  +Y T I  LCK
Sbjct: 366 LDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCK 425

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + +AV  F+ +       +I ++ SLI GLC  G  +   EL   +    + P+ + 
Sbjct: 426 IGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 485

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
            + ++  LC +G++ +A+D F  +    V PNV++++ LI G+  + +  + I+   +M 
Sbjct: 486 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMV 545

Query: 442 EINVMPDASIVSIVVDLLAKN 462
            I + PD+   + +++   KN
Sbjct: 546 SIGLRPDSWTYNALLNGYFKN 566



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 237/470 (50%), Gaps = 44/470 (9%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV---FGCEPDVFTYTTLV 65
           +V  R+ +  +TPD  ++ +LIKGLC E +  EA  L   +     + C P+V +Y+T++
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
           +G  +      A  LF+EM       G    P+ VTY+++IDGLCK   ++KA+ +L  M
Sbjct: 211 DGFFKEGEVDKAYFLFDEM------IGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHM 264

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
            DK + PN  TY  +IRG+C      EA RL  +M   G+QP+VVT+ +++   CK G+ 
Sbjct: 265 FDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRC 324

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR-------------------------- 219
            EA  + D M++ G +P++  Y+ LL G+   G                           
Sbjct: 325 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 384

Query: 220 ---------VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
                    V+ A   F  M   G +  V SYS +I+  CK   +E A+  +++M+S+G+
Sbjct: 385 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGL 444

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P+++   +L  GL  I + ++  +L  EM   G+  D     T +D LCK G +VEA +
Sbjct: 445 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 504

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
            F  +  +  + ++ +YN+LIDG C  G+++ +++ F  +    L P+  TY+ ++ G  
Sbjct: 505 FFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYF 564

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            +G+++ A  L+ +M    V    IT ++++ G  +        EL  KM
Sbjct: 565 KNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKM 614



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 152/326 (46%), Gaps = 4/326 (1%)

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQH 198
           +IR FC     + A   F   +  G +   VT N ++  LC   + D+A  ++   M + 
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG---CKHTVFSYSILINGYCKNKEI 255
           G  PD F+YN L+ G C+  +   A EL + M + G   C   V SYS +I+G+ K  E+
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A  L+ EM+ +G  PDVV +++L  GL +   + +A  +   M   GV  +T TY   
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I G C  G + EAV L   +     + D+  Y  LI   CK GR   A  +F S+     
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ 339

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN   Y I++ G    G +   RDL   M  + +      F++LI  + +     K + 
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAK 461
              +M++  + PD    S V+ +L K
Sbjct: 400 AFTEMRQNGLRPDVVSYSTVIHILCK 425



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 173/379 (45%), Gaps = 10/379 (2%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK---RLFIEMMDQGV 165
           L +E  ++   ELL Q +  ++       T V R    +   + A     LF  M   GV
Sbjct: 28  LGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGV 87

Query: 166 Q---PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
                N     +++   C  G++D A     L ++ G R    T N L+ G C   R + 
Sbjct: 88  NMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDD 147

Query: 223 AKEL-FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVVIHN 278
           A ++ F  M  +G    VFSY+ LI G C  K+ + AL L   M + G     P+VV ++
Sbjct: 148 AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYS 207

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           T+  G F+  +V++A+ LFDEM   G   D  TY + IDGLCK   + +A  +   +   
Sbjct: 208 TIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDK 267

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
               + R YN +I G C  G+LE A+ L + +    L P+VVTY ++I   C  G+  +A
Sbjct: 268 GVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEA 327

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           R +F  M      PN   + +L+ G+        V +LL  M    +  +    +I++  
Sbjct: 328 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICA 387

Query: 459 LAKNEISLNSLPSFTVHEQ 477
            AK+     ++ +FT   Q
Sbjct: 388 YAKHGAVDKAMTAFTEMRQ 406


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 261/492 (53%), Gaps = 29/492 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +L ++  S   PD VT++ LI+  C   R  EA ++F  +   G +P+   
Sbjct: 283 LGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI 342

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFG------VVC------------------- 95
           Y  L++G       I   +L + M      F       ++C                   
Sbjct: 343 YHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMR 402

Query: 96  ----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+ V+Y+T+I  LCK G V+ A     QM  + + PN++++TS+I G C   +W 
Sbjct: 403 QNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWK 462

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           + + L  EM+++G+ P+ +  N IMD LCK G++ EA    D++I  GV+PD  +YNTL+
Sbjct: 463 KVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLI 522

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+C  G+++ + +    M S+G +   ++Y+ L+NGY KN  +E AL+LY EM  K +K
Sbjct: 523 DGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVK 582

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
              +  N +  GLF+  ++  A +L+ +M   G      TY T + GLC+N  + EA+ +
Sbjct: 583 FCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRM 642

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  LR  + E D+R ++ +I+ L K GR++ A  LF ++     VP+V+TYS+MI     
Sbjct: 643 FEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIE 702

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G ++++ +LFL ME+N    +    ++++R  +   +  +    L K+ E N   +AS 
Sbjct: 703 EGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEAST 762

Query: 452 VSIVVDLLAKNE 463
            ++++ ++++ +
Sbjct: 763 AALLIPIVSEKK 774



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/464 (32%), Positives = 242/464 (52%), Gaps = 6/464 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVF 59
           +GR+   F      LK+ +    VT   LIKGLC  +R  +A  + F ++   G  PDVF
Sbjct: 104 VGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVF 163

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           +Y  L+ GLC    +  AL L   M A+G    G  C PN V+Y T+IDG  KEG VDKA
Sbjct: 164 SYNALIKGLCVEKKSQEALELLIHMTADG----GYNCSPNVVSYNTVIDGFFKEGEVDKA 219

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             L  +M  + + P+VVTY S+I G C A+  ++A  +   M D+GV P+  T+N+++  
Sbjct: 220 YFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRG 279

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            C  G+++EA RLL  M   G++PD  TY+ L+  +C  GR   A+ +F SM   G K  
Sbjct: 280 YCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPN 339

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
              Y IL++GY     +     L   M+  GI  +    N L     +   V++A   F 
Sbjct: 340 STIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFT 399

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM++NG+  D  +Y T I  LCK G + +AV  F+ +       +I ++ SLI GLC  G
Sbjct: 400 EMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIG 459

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
             +   EL   +    + P+ +  + ++  LC +G++ +A+D F  +    V P+V++++
Sbjct: 460 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYN 519

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            LI G+  + +  + I+ L +M  I + PD+   + +++   KN
Sbjct: 520 TLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKN 563



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 233/470 (49%), Gaps = 44/470 (9%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV---FGCEPDVFTYTTLV 65
           +V  R+ +  +TPD  ++ +LIKGLC E +  EA  L   +     + C P+V +Y T++
Sbjct: 148 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVI 207

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
           +G  +      A  LF EM       G    P+ VTY ++IDGLCK   +DKA  +L  M
Sbjct: 208 DGFFKEGEVDKAYFLFHEM------MGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM 261

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
            DK + P+  TY  +IRG+C      EA RL  +M   G+QP+VVT+++++   CK G+ 
Sbjct: 262 FDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRC 321

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR-------------------------- 219
            EA  + D M++ G +P++  Y+ LL G+   G                           
Sbjct: 322 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 381

Query: 220 ---------VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
                    V+ A   F  M   G +  V SYS +I+  CK   +E A+  +++M+S+G+
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P+++   +L  GL  I + ++  +L  EM   G+  D     T +D LCK G +VEA +
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 501

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
            F  +  +  + D+ +YN+LIDG C  G+++ +++    +    L P+  TY+ ++ G  
Sbjct: 502 FFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYF 561

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            +G+++ A  L+ +M    V    IT ++++ G  +        EL  KM
Sbjct: 562 KNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKM 611



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 4/326 (1%)

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQH 198
           +IR FC     + A   F   +  G +   VT N ++  LC   + D+A  ++   M + 
Sbjct: 97  LIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPEL 156

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG---CKHTVFSYSILINGYCKNKEI 255
           G  PD F+YN L+ G C+  +   A EL + M + G   C   V SY+ +I+G+ K  E+
Sbjct: 157 GYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEV 216

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A  L+ EM+ +G+ PDVV +N+L  GL +   +++A  +   M   GV  DT TY   
Sbjct: 217 DKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIM 276

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I G C  G + EAV L   +     + D+  Y+ LI   CK GR   A  +F S+     
Sbjct: 277 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQ 336

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN   Y I++ G    G +   RDL   M  + +      F++LI  + +     K + 
Sbjct: 337 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 396

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAK 461
              +M++  + PD    S V+ +L K
Sbjct: 397 AFTEMRQNGLRPDVVSYSTVIHILCK 422



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 175/376 (46%), Gaps = 7/376 (1%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK---RLFIEMMDQGV 165
           L +E  ++   ELL Q +  ++       T V R    +   + A     LF  M+  GV
Sbjct: 28  LGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGV 87

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
                   +++   C  G++D A     L ++ G R    T N L+ G C   R + A +
Sbjct: 88  NMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMD 147

Query: 226 L-FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVVIHNTLF 281
           + F  M  +G    VFSY+ LI G C  K+ + AL L   M + G     P+VV +NT+ 
Sbjct: 148 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVI 207

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G F+  +V++A+ LF EM   G+  D  TY + IDGLCK   + +AV +   +      
Sbjct: 208 DGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVM 267

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D R YN +I G C  G+LE A+ L + +    L P+VVTYS++I   C  G+  +AR +
Sbjct: 268 PDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSV 327

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F  M      PN   + +L+ G+        V +LL  M    +  +    +I++   AK
Sbjct: 328 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 387

Query: 462 NEISLNSLPSFTVHEQ 477
           +     ++ +FT   Q
Sbjct: 388 HGAVDKAMTAFTEMRQ 403


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  264 bits (674), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 166/512 (32%), Positives = 259/512 (50%), Gaps = 49/512 (9%)

Query: 6   HGFVVLGR----------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG+ +LG+          + +    PD  T  S +  LC   +  EAA  F  +   G +
Sbjct: 305 HGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHK 364

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNG-------------------------- 89
           PD+ TY+ L++G     + +  LNLF  M  GNG                          
Sbjct: 365 PDLVTYSVLLHGYAAEGYVVDMLNLFNSM-EGNGIVADHSVYNILIDAYGKRGMMDEAML 423

Query: 90  ------EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
                 E GV+  P+  TY T+I    + G +  A +   QM    +KP+ + Y S+I+G
Sbjct: 424 IFTQMQERGVM--PDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQG 481

Query: 144 FCYAKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           FC   +  +AK L  EMM +G+ +PN V FN I++ LCK G++ EA  + DL+I  G RP
Sbjct: 482 FCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERP 541

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D  T+N+L+DG+ L G++  A  +  +M S+G +  V +YS L++GYC+N  I+  L L+
Sbjct: 542 DVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILF 601

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EMLSKG+KP  + +  +  GLF   +   A K+  EM  +G   D  T    + GLC+N
Sbjct: 602 REMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN 661

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
               EA+ LF  L  +  +F+I   N++ID + K  + E A ELF S+    LVPN  TY
Sbjct: 662 NCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTY 721

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
            +MI  L  +G +++A ++F  ME++   P+    + +IR  +   E SK    L K+  
Sbjct: 722 GVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDG 781

Query: 443 INVMPDASIVSIVVDLLA---KNEISLNSLPS 471
             +  +AS  S+++ L +   K    + SLP+
Sbjct: 782 KTISLEASTASLMLSLFSRKGKYREQIKSLPA 813



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 238/462 (51%), Gaps = 6/462 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R + GF + GR LK+    D +    L+K LC   R  +A   L  ++   G EPD  +Y
Sbjct: 134 RPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISY 193

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +T++  LC  S +  AL+L   M   +G     C PN V+Y T+I G  +EG V KA  L
Sbjct: 194 STVLKSLCEDSRSQRALDLLHTMVKKSGG----CSPNVVSYNTVIHGFFREGEVSKACNL 249

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + + P+VVTY+S I   C A+  ++A+ +  +M+  G +P+ VT+N ++     
Sbjct: 250 FHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSI 309

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+  E + +   M + G+ PD FT N+ +   C  G+   A E F SM + G K  + +
Sbjct: 310 LGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVT 369

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS+L++GY     +   L+L++ M   GI  D  ++N L     +   ++ A  +F +MQ
Sbjct: 370 YSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQ 429

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  D WTY T I    + G + +A++ F+ +  +  + D   YNSLI G C  G L 
Sbjct: 430 ERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLV 489

Query: 362 IALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A EL   +   G+  PN V ++ +I  LC +G++ +A+D+F  +      P+VITF+ L
Sbjct: 490 KAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSL 549

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           I G+  + +  K   +L  M  + + PD    S ++D   +N
Sbjct: 550 IDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRN 591



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 242/494 (48%), Gaps = 48/494 (9%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTYTTLVN 66
           V+L R+ +    PD +++++++K LC +SR   A  L   +  +  GC P+V +Y T+++
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G  R      A NLF EM     + GVV  P+ VTY++ ID LCK   +DKA+ +L QM 
Sbjct: 236 GFFREGEVSKACNLFHEMM----QQGVV--PDVVTYSSYIDALCKARAMDKAELVLRQMI 289

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
               +P+ VTY  +I G+     W E   +F EM  +G+ P++ T N  M  LCK+GK  
Sbjct: 290 SNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSK 349

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYSI 244
           EA+   D M   G +PD  TY+ LL G+   G V     LF SME  G    H+V  Y+I
Sbjct: 350 EAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSV--YNI 407

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI+ Y K   ++ A+ ++++M  +G+ PD   + T+      + ++  A   F++M   G
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 305 VAADTWTYRTFIDG------------------------------------LCKNGYIVEA 328
           +  DT  Y + I G                                    LCK G +VEA
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            ++F  +  +    D+  +NSLIDG    G++E A  +  ++    + P+VVTYS ++ G
Sbjct: 528 QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C +G++D    LF +M    V P  IT+ +++ G           ++ H+M E     D
Sbjct: 588 YCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647

Query: 449 ASIVSIVVDLLAKN 462
            S   I++  L +N
Sbjct: 648 ISTCGIILGGLCRN 661



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 192/393 (48%), Gaps = 5/393 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    ++  ++ +    PDA T+ ++I       R+ +A   F ++   G +PD   Y
Sbjct: 416 GMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVY 475

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ G C   + + A  L  EM +       +  PNTV + +II+ LCKEG V +A+++
Sbjct: 476 NSLIQGFCMHGNLVKAKELISEMMSRG-----IPRPNTVFFNSIINSLCKEGRVVEAQDI 530

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +     +P+V+T+ S+I G+       +A  +   M+  G++P+VVT++ ++D  C+
Sbjct: 531 FDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCR 590

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++D+   L   M+  GV+P   TY  +L G    GR   AK++   M   G    + +
Sbjct: 591 NGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
             I++ G C+N   + A++L+ ++ +  +K ++ I NT+   ++++ + E A +LFD + 
Sbjct: 651 CGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSIS 710

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY   I  L K G + EA  +F  +    C    R  N++I  L + G + 
Sbjct: 711 ATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEIS 770

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
            A      +    +     T S+M+      G+
Sbjct: 771 KAGNYLSKVDGKTISLEASTASLMLSLFSRKGK 803



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 165/333 (49%), Gaps = 3/333 (0%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA-SR 190
           P V TY  ++   C A        LF   +  G++ +V+  N+++  LC   + D+A + 
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILING 248
           LL  M + GV PD  +Y+T+L   C   R   A +L  +M  +S GC   V SY+ +I+G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           + +  E+  A +L+ EM+ +G+ PDVV +++    L +   +++A  +  +M  NG   D
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY   I G    G   E   +F  +       DI   NS +  LCK G+ + A E F 
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           S+      P++VTYS+++ G   +G +    +LF  ME N +V +   +++LI  + +  
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              + + +  +M+E  VMPDA     V+   ++
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSR 449



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 164/329 (49%), Gaps = 7/329 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVF 59
           MGR++       +++     PD + + SLI+G C    +++A  L +++   G   P+  
Sbjct: 450 MGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTV 509

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            + +++N LC+    + A ++F+ + +  GE      P+ +T+ ++IDG    G ++KA 
Sbjct: 510 FFNSIINSLCKEGRVVEAQDIFDLVIH-IGE-----RPDVITFNSLIDGYGLVGKMEKAF 563

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +L  M    I+P+VVTY++++ G+C     ++   LF EM+ +GV+P  +T+ +I+  L
Sbjct: 564 GVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGL 623

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
             +G+   A ++   MI+ G   D  T   +L G C     + A  LF  + +M  K  +
Sbjct: 624 FNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNI 683

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
              + +I+   K ++ E A  L+  + + G+ P+   +  +   L +   VE A  +F  
Sbjct: 684 AIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSL 743

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           M+++G A  +      I  L + G I +A
Sbjct: 744 MEKSGCAPSSRLLNNIIRVLLEKGEISKA 772



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 151/315 (47%), Gaps = 3/315 (0%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P V T+N++MD  C+  +      L    ++ G++ D    N LL   C   R + A  +
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 227 FV-SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK--GIKPDVVIHNTLFVG 283
            +  M  +G +    SYS ++   C++   + AL L   M+ K  G  P+VV +NT+  G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            F   +V +A  LF EM + GV  D  TY ++ID LCK   + +A  +   +     E D
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              YN +I G    G+ +    +FR +    L+P++ T +  +  LC  G+  +A + F 
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            M      P+++T+ +L+ G+        ++ L + M+   ++ D S+ +I++D   K  
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 464 ISLNSLPSFTVHEQQ 478
           +   ++  FT  +++
Sbjct: 417 MMDEAMLIFTQMQER 431



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 140/306 (45%), Gaps = 15/306 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +   ++     PD +TF SLI G     ++ +A  +   +   G EPDV TY
Sbjct: 522 GRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTY 581

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++G CR       L LF EM +     GV  +P T+TY  I+ GL  +G    AK++
Sbjct: 582 SALLDGYCRNGRIDDGLILFREMLSK----GV--KPTTITYGIILHGLFNDGRTVGAKKM 635

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +     ++ T   ++ G C     +EA  LF ++    V+ N+   N ++D + K
Sbjct: 636 CHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYK 695

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K +EA+ L D +   G+ P+A TY  ++      G V  A  +F  ME  GC  +   
Sbjct: 696 VRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRL 755

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF--------EIHQVERA 293
            + +I    +  EI  A +  S++  K I  +     +L + LF        +I  +   
Sbjct: 756 LNNIIRVLLEKGEISKAGNYLSKVDGKTISLEAST-ASLMLSLFSRKGKYREQIKSLPAM 814

Query: 294 FKLFDE 299
           ++ FDE
Sbjct: 815 YQFFDE 820



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 3/288 (1%)

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS- 260
           P   TYN L+D  C   R      LF      G K  V   +IL+   C  K  + A++ 
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM--QRNGVAADTWTYRTFIDG 318
           L   M   G++PD + ++T+   L E  + +RA  L   M  +  G + +  +Y T I G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             + G + +A  LFH +       D+  Y+S ID LCK+  ++ A  + R +      P+
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VTY+ MI G    GQ  +   +F +M    ++P++ T +  +    +  +  +  E   
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNV 486
            M      PD    S+++   A     ++ L  F   E    V + +V
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSV 404


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/448 (31%), Positives = 242/448 (54%), Gaps = 7/448 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++  G+ +  ++L +  +PD + +  LI G   + R+ EA  L+ ++   G EP ++TY
Sbjct: 22  GKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTY 81

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+N  C+ +    A+ LF+ MA    E G   EP+ VTY+TII GLCK G V +A E+
Sbjct: 82  NSLLNAFCKETKMKEAMELFKTMA----EKGF--EPDVVTYSTIISGLCKTGKVTEALEM 135

Query: 122 LL-QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M ++    N V Y ++I G C  ++   A +L  EM  +G  P+ +T+N I+  LC
Sbjct: 136 LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLC 195

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + GK+ EA +  D M   G  PD   YN LLD     G+ + A +LF  + + G      
Sbjct: 196 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV 255

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++ G  +   ++ A  ++ +M++ G  P+   ++ +  G     +V+ A K+ +EM
Sbjct: 256 TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + G   D  TY   +DGLCK   + +A ELF T+    C  DI +Y+ +++GLCK+ ++
Sbjct: 316 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 375

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  LF  +    LVP+VVT++I++ GLC  G++D+A+DL   M  +   P+ + ++ L
Sbjct: 376 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTL 435

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD 448
           + G  +     +   L   MKE   + D
Sbjct: 436 MNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/449 (30%), Positives = 248/449 (55%), Gaps = 8/449 (1%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           ++ C +P+  TF  ++K  C + ++ +   LF ++   G  PD   Y  L++G  +    
Sbjct: 1   MREC-SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRV 59

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A  L+EEM +      V  EP+  TY ++++  CKE  + +A EL   M +K  +P+V
Sbjct: 60  DEANRLYEEMVS------VGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDV 113

Query: 135 VTYTSVIRGFCYAKDWNEA-KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VTY+++I G C      EA + LF +M+++G   N V +N +++ LCK+  ++ A +LL+
Sbjct: 114 VTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLE 173

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G  PD  TYNT+L G C  G+V+ AK+ F SM S G    V +Y+ L++   K  
Sbjct: 174 EMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG 233

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           + + A+ L+ ++++KG  PD V +N++ +GL     ++ A ++F +M  +G A +  TY 
Sbjct: 234 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYS 293

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             + G C+   + +A ++   +  +    D+  YN L+DGLCK+  ++ A ELF ++   
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 353

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P++V+YS+++ GLC   ++  AR LF  M E  +VP+V+TF++L+ G  +  +  + 
Sbjct: 354 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 413

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +LL +M      PD    + +++ L K 
Sbjct: 414 KDLLDQMTCSGCAPDYVAYNTLMNGLRKQ 442



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 189/334 (56%), Gaps = 1/334 (0%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           PN  T+  V++ FC      +  +LF +M+D G+ P+ + +N+++D   K G++DEA+RL
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            + M+  G+ P  +TYN+LL+ FC   ++  A ELF +M   G +  V +YS +I+G CK
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 252 NKEIEGALS-LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
             ++  AL  L+ +M+ +G   + V +N L  GL +   +ERA+KL +EM   G   D  
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY T + GLC+ G + EA + F ++       D+ AYN L+D L K G+ + A++LF+ +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                +P+ VTY+ ++ GL     MD+A ++F  M  +   PN  T+ +++ G  R  + 
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
               ++L +M +I  +PD    +I++D L K  +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 339



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 141/274 (51%), Gaps = 8/274 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+VS        +    ++PD V +  L+  L  E +  EA  LF  +   G  PD  T
Sbjct: 197 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVT 256

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y +++ GL R S+   A  +F++M A+G       C PN  TY+ ++ G C+   VD A 
Sbjct: 257 YNSILLGLARKSNMDEAEEMFKKMVASG-------CAPNGATYSIVLSGHCRAKKVDDAH 309

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           ++L +M      P+VVTY  ++ G C     ++A  LF  M+D G  P++V+++V+++ L
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK  K+ +A  L D MI+  + PD  T+N L+DG C  G+++ AK+L   M   GC    
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDY 429

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            +Y+ L+NG  K      A  L   M  KG   D
Sbjct: 430 VAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 6/193 (3%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           +++ S   P+  T++ ++ G C   ++ +A  +  ++   G  PDV TY  L++GLC+T+
Sbjct: 279 KMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTN 338

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A  LF  M + NG     C P+ V+Y+ +++GLCK   V  A+ L  +M ++ + P
Sbjct: 339 LVDKAHELFSTMVD-NG-----CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP 392

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +VVT+  ++ G C A   +EAK L  +M   G  P+ V +N +M+ L K G+  +A RL 
Sbjct: 393 DVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLT 452

Query: 193 DLMIQHGVRPDAF 205
             M + G   D F
Sbjct: 453 QAMKEKGFLSDCF 465


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/442 (32%), Positives = 239/442 (54%), Gaps = 7/442 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV      +  + +  F+PD VTF SL+ G C    + +A  +   +   G +PDV+TY
Sbjct: 242 GRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTY 301

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++G+C+      A+ + ++M          C PNTVTY T+I  LCKE  ++ A +L
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRE------CSPNTVTYNTLISALCKENEIEAATDL 355

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K + P+V T+ ++I+G C +K+ + A  +F EM ++G +P+  T+++++D LC 
Sbjct: 356 ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCY 415

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA  LL  M   G   +A  YNTL+DG C + R+  A+E+F  ME +G   +  +
Sbjct: 416 ERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVT 475

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G CKNK +E A  L  +M+ +G+KPD   +N+L      +  +E+A  +   M 
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA 535

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   D +TY T I GLC+ G +  A +L  ++++        AYN +I  L    R +
Sbjct: 536 SNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTK 595

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCN-DGQMDKARDLFLDMEENAVVPNVITFDML 420
             + LFR +      P+ +T+ I+  GLCN  G + +A D  ++M E  ++P   +F  L
Sbjct: 596 EGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFL 655

Query: 421 IRGFIRINEPSKVIELLHKMKE 442
             G   ++    +IEL++ + E
Sbjct: 656 AEGLCSLSMEDTLIELINMVME 677



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 242/455 (53%), Gaps = 6/455 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +TFT+L++G   E  +  A  +  ++  +GC     +   LVNG C+      AL  
Sbjct: 191 PDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRF 250

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             E++    E G    P+ VT+ ++++G C+ G V+ A +++  M +K   P+V TY S+
Sbjct: 251 VLEVS----EEGF--SPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSL 304

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C   ++ +A  +  +M+ +   PN VT+N ++  LCK  +++ A+ L  +++  G+
Sbjct: 305 ISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGL 364

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T+NTL+ G CL+   + A E+F  M++ GCK   F+YSILI+  C  + ++ AL 
Sbjct: 365 LPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALM 424

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM S G   + V++NTL  GL +  ++E A ++FD+M+  GV+  + TY T IDGLC
Sbjct: 425 LLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLC 484

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           KN  + EA +L   + +   + D   YNSL+   C+ G +E A ++ +++      P++ 
Sbjct: 485 KNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIF 544

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY  +IGGLC  G++D A  L   ++   +V     ++ +I+         + + L  +M
Sbjct: 545 TYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREM 604

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
            E +  PDA    IV   L      +     FTV 
Sbjct: 605 MEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVE 639



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 219/430 (50%), Gaps = 6/430 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F PD   +   +  L  ++++     L +K+   G   DV T+  L+  LC+      A+
Sbjct: 119 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAI 178

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            + EEMAN         +P+ +T+TT++ G  +EG ++ A ++  QM         V+  
Sbjct: 179 LMLEEMANHG------LKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVK 232

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            ++ GFC      EA R  +E+ ++G  P+ VTFN +++  C+ G +++A  ++D MI+ 
Sbjct: 233 VLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK 292

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  PD +TYN+L+ G C  G    A E+   M    C     +Y+ LI+  CK  EIE A
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA 352

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L   ++SKG+ PDV   NTL  GL      + A ++F+EM+  G   D +TY   ID 
Sbjct: 353 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 412

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LC    + EA+ L   +    C  +   YN+LIDGLCKS R+E A E+F  +    +  +
Sbjct: 413 LCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRS 472

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VTY+ +I GLC + ++++A  L   M    + P+  T++ L+  F R+ +  K  +++ 
Sbjct: 473 SVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQ 532

Query: 439 KMKEINVMPD 448
            M      PD
Sbjct: 533 TMASNGCEPD 542



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 197/404 (48%), Gaps = 46/404 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V+    ++  +++  F PD  T+ SLI G+C      +A  +  ++ +  C P+  T
Sbjct: 276 IGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVT 335

Query: 61  YTTLVN-----------------------------------GLCRTSHTIVALNLFEEMA 85
           Y TL++                                   GLC + +  +A+ +FEEM 
Sbjct: 336 YNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK 395

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
           N        C+P+  TY+ +ID LC E  + +A  LL +M+      N V Y ++I G C
Sbjct: 396 NKG------CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLC 449

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            ++   +A+ +F +M   GV  + VT+N ++D LCKN +++EAS+L+D MI  G++PD F
Sbjct: 450 KSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKF 509

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN+LL  FC  G +  A ++  +M S GC+  +F+Y  LI G C+   ++ A  L   +
Sbjct: 510 TYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSV 569

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK-NGY 324
             KGI      +N +   LF   + +   +LF EM       D  T++    GLC   G 
Sbjct: 570 QMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGP 629

Query: 325 IVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLEIALEL 366
           I EA++   T+ +L+     +  ++  L +GLC     +  +EL
Sbjct: 630 IQEAIDF--TVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIEL 671



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 179/366 (48%), Gaps = 2/366 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN  T+ T+I       F +    L +   +   KP+   Y   +            + L
Sbjct: 88  PNATTFATLIQSFT--NFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEML 145

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +M+++G+  +V TFNV++  LCK  ++  A  +L+ M  HG++PD  T+ TL+ GF  
Sbjct: 146 HSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE 205

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G +N A ++   M   GC  T  S  +L+NG+CK   +E AL    E+  +G  PD V 
Sbjct: 206 EGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVT 265

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            N+L  G   I  V  A  + D M   G   D +TY + I G+CK G   +A+E+   + 
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
           + +C  +   YN+LI  LCK   +E A +L R L    L+P+V T++ +I GLC     D
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A ++F +M+     P+  T+ +LI          + + LL +M+      +A + + ++
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445

Query: 457 DLLAKN 462
           D L K+
Sbjct: 446 DGLCKS 451



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 82/214 (38%), Gaps = 63/214 (29%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     ++ +++     PD  T+ SL+   C    I +A  +   +   GCEPD+FTY 
Sbjct: 488 RVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYG 547

Query: 63  TLVNGLCR---------------------TSHT----IVALNLFEEMANGNGEFGVVCE- 96
           TL+ GLCR                     T H     I AL + +    G   F  + E 
Sbjct: 548 TLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEK 607

Query: 97  ---PNTVTYTTIIDGLCKEGF-VDKAKELLLQMKDKNIKPNVVTY--------------- 137
              P+ +T+  +  GLC  G  + +A +  ++M +K I P   ++               
Sbjct: 608 SDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDT 667

Query: 138 ------------------TSVIRGFCYAKDWNEA 153
                             TS+IRGF   + +N+A
Sbjct: 668 LIELINMVMEKAQMSERETSMIRGFLKIRKFNDA 701


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/374 (37%), Positives = 225/374 (60%), Gaps = 2/374 (0%)

Query: 91  FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
           FGV    N  T   +I+ LC+   +  A  +L +M    I+P+ VT+T++I G C     
Sbjct: 115 FGVA--HNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRI 172

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
            EA  LF EM  +   PN VTF +++D LCK G + EA  + + M + GV P+ +TYN L
Sbjct: 173 KEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNAL 232

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++G+CL   +N A ++F  M   GC  +V SYSILINGYCK++ I+ A +L ++M  K +
Sbjct: 233 MNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKEL 292

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P+ V +NTL  GL     +  A +LF +M  +G+  +  TY   +DGLCK+G++ EA++
Sbjct: 293 IPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALK 352

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L  +++  K E DI  YN LI G+  +G+LE+A ELF  L    + P+V TY+IMI GL 
Sbjct: 353 LLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLL 412

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            +G  D+A  LF  ME++  +P+  +++++I+GF++  +PS  I+L+ +M       D+S
Sbjct: 413 KEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSS 472

Query: 451 IVSIVVDLLAKNEI 464
              +++DL + +EI
Sbjct: 473 TFKMLLDLESHDEI 486



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 195/342 (57%), Gaps = 6/342 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T   LI  LC  S I  A ++ +K+   G +PD  T+TTL+NGLC       A+ LF EM
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
           A      G    PNTVT+T ++D LCK+G V +A+ +   M +K ++PN+ TY +++ G+
Sbjct: 183 A------GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGY 236

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C   + N+A ++F  M+ +G  P+V +++++++  CK+ ++DEA  LL  M +  + P+ 
Sbjct: 237 CLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNT 296

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TYNTL+ G C    +  A+ELF  M S G    + +YSIL++G CK+  +E AL L + 
Sbjct: 297 VTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTS 356

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  + ++PD+V++N L  G+F   ++E A +LF ++  NG+     TY   I GL K G 
Sbjct: 357 MQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGL 416

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
             EA +LF  +       D  +YN +I G  ++     A++L
Sbjct: 417 SDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQL 458



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/353 (33%), Positives = 183/353 (51%), Gaps = 44/353 (12%)

Query: 3   RVSH---GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR--------- 50
           R+SH      VL ++ K    PD+VTFT+LI GLC E RI EA  LF ++          
Sbjct: 133 RLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTV 192

Query: 51  --------------------VF------GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
                               VF      G EP+++TY  L+NG C       A  +FE M
Sbjct: 193 TFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM 252

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
             G G     C P+  +Y+ +I+G CK   +D+AK LL QM +K + PN VTY ++++G 
Sbjct: 253 V-GKG-----CAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C+A    EA+ LF +M   G+ PN+ T+++++D LCK+G ++EA +LL  M +  + PD 
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDI 366

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             YN L+ G  + G++  AKELF  + + G + +V +Y+I+I G  K    + A  L+ +
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           M   G  PD   +N +  G  +      A +L DEM     +AD+ T++  +D
Sbjct: 427 MEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 137/278 (49%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A      MI    RP        L       + +    L   M+  G  H  ++ +I
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN  C+   I  A+S+ S+M   GI+PD V   TL  GL    +++ A +LF+EM    
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +T T+   +D LCK G + EA  +F T+     E +I  YN+L++G C    +  A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           ++F  +      P+V +YSI+I G C   ++D+A+ L   M E  ++PN +T++ L++G 
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
              +   +  EL  KM    ++P+    SI++D L K+
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKH 344



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 151/307 (49%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           ++A   F  M+    +P+ V     +  + K  +      L + M   GV  + +T N L
Sbjct: 68  DDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNIL 127

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++  C    ++ A  +   M  +G +    +++ LING C    I+ A+ L++EM  +  
Sbjct: 128 INSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDA 187

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P+ V    L   L +   V  A  +F+ M   GV  + +TY   ++G C    + +A +
Sbjct: 188 MPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASK 247

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +F  +    C   + +Y+ LI+G CKS R++ A  L   +    L+PN VTY+ ++ GLC
Sbjct: 248 VFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLC 307

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
           +   + +A++LF  M  + ++PN+ T+ +L+ G  +     + ++LL  M+E  + PD  
Sbjct: 308 HASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIV 367

Query: 451 IVSIVVD 457
           + +I++ 
Sbjct: 368 LYNILIQ 374


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 254/496 (51%), Gaps = 40/496 (8%)

Query: 6   HGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG+  LGR+ ++             P+ V   S +  LC   R  EAA +F  +   G +
Sbjct: 343 HGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHK 402

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANG--------------NGEFGVV------ 94
           PD+ +Y TL++G          + LF  M +NG                + G+V      
Sbjct: 403 PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLI 462

Query: 95  --------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                     P+ VTY+T+I    + G +  A E   QM  + I+PN   Y S+I+GFC 
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCM 522

Query: 147 AKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                +AK L  EM+++G+ +P++V FN +++ LCK+G++ +A  + DL+   G RPD  
Sbjct: 523 HGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVI 582

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T+ +L+DG+CL G+++ A ++  +ME +G +  + +YS L++GY KN  I   L+L+ EM
Sbjct: 583 TFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREM 642

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             KG+KP+ V +  +  GLF   +   A K F EM  +G       Y   + GLC+N   
Sbjct: 643 QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCA 702

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA+ LF  L  +  +F I   N++I+ + K  R E A ELF ++    L+PN  TY +M
Sbjct: 703 DEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVM 762

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I  L  DG ++ A ++F  ME++ +VP     + +IR  +   E +K    L K+    +
Sbjct: 763 IINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRI 822

Query: 446 MPDASIVSIVVDLLAK 461
           + +AS  S+++ L ++
Sbjct: 823 LLEASTTSLMLSLFSR 838



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 150/462 (32%), Positives = 238/462 (51%), Gaps = 6/462 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R   G V+ G IL++      +T ++L+K LC  +R  EA   L  ++   GC P+VF+Y
Sbjct: 172 RPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + ++ GLC  S +  AL+LF+ MA   G     C PN V Y T+I G  KEG   KA  L
Sbjct: 232 SIILKGLCDNSMSQRALDLFQMMAKEGG----ACSPNVVAYNTVIHGFFKEGETGKACSL 287

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +KP+VVTY  +I   C A+  ++A+ +  +M   G QP+ VT+N ++     
Sbjct: 288 FHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYAT 347

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA+++   M   G+ P+    N+ L   C  GR   A E+F SM + G K  + S
Sbjct: 348 LGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVS 407

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  L++GY         + L++ M S GI  D  + N L     +   V+ A  +F EMQ
Sbjct: 408 YCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQ 467

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + GV+ D  TY T I    + G + +A+E F+ +     + +   Y+S+I G C  G L 
Sbjct: 468 QQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLV 527

Query: 362 IALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A EL   +   G+  P++V ++ +I  LC DG++  A D+F  + +    P+VITF  L
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSL 587

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           I G+  + +  K  ++L  M+ + V  D    S ++D   KN
Sbjct: 588 IDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKN 629



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 228/505 (45%), Gaps = 52/505 (10%)

Query: 4   VSHGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 53
           V HGF   G   K+C            PD VT+  +I  LC    + +A  +  ++   G
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
            +PD  TY  +++G         A  +F +M +     G++  PN V   + +  LCK G
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSR----GLI--PNIVICNSFLASLCKHG 384

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
              +A E+   M  K  KP++V+Y +++ G+     + +   LF  M   G+  +   FN
Sbjct: 385 RSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFN 444

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           +++    K G +D+A  +   M Q GV PD  TY+T++  F   GR+  A E F  M + 
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIHNTLFVGLFEIHQVER 292
           G +     Y  +I G+C +  +  A  L SEM++KGI +PD+V  N++   L +  +V  
Sbjct: 505 GIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMD 564

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  +FD +   G   D  T+ + IDG C  G + +A ++   + ++  E DI  Y++L+D
Sbjct: 565 AHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLD 624

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI-------------------------- 386
           G  K+GR+   L LFR +    + PN VTY IM+                          
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684

Query: 387 ---------GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
                    GGLC +   D+A  LF  +    V  ++   + +I    ++    +  EL 
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF 744

Query: 438 HKMKEINVMPDASIVSIVVDLLAKN 462
             +    ++P+ S   +++  L K+
Sbjct: 745 ATISASGLLPNESTYGVMIINLLKD 769



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 192/393 (48%), Gaps = 5/393 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V    ++   + +   +PD VT++++I       R+ +A   F ++   G +P+   Y
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++ G C     + A  L  EM N       +  P+ V + ++I+ LCK+G V  A ++
Sbjct: 514 HSIIQGFCMHGGLVKAKELVSEMINKG-----IPRPDIVFFNSVINSLCKDGRVMDAHDI 568

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              + D   +P+V+T+TS+I G+C     ++A ++   M   GV+ ++VT++ ++D   K
Sbjct: 569 FDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFK 628

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++++   L   M + GV+P+  TY  +L G    GR   A++ F  M   G   TV  
Sbjct: 629 NGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI 688

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y I++ G C+N   + A+ L+ ++ +  +K  + I NT+   ++++ + E A +LF  + 
Sbjct: 689 YGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATIS 748

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  +  TY   I  L K+G + +A  +F ++         R  N +I  L + G + 
Sbjct: 749 ASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIA 808

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
            A      +    ++    T S+M+      G+
Sbjct: 809 KAGNYLSKVDGKRILLEASTTSLMLSLFSRKGK 841



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 162/331 (48%), Gaps = 8/331 (2%)

Query: 156 LFIEMMDQGVQPNVV-----TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           LF  +  +   P VV     T++++MD  C+  + D    L   +++ G++    T +TL
Sbjct: 139 LFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTL 198

Query: 211 LDGFCLTGRVNHAKELFV-SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           L   C   R   A  + +  M  +GC   VFSYSI++ G C N   + AL L+  M  +G
Sbjct: 199 LKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEG 258

Query: 270 --IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
               P+VV +NT+  G F+  +  +A  LF EM R GV  D  TY   ID LCK   + +
Sbjct: 259 GACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDK 318

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  +   +     + D   YN +I G    GRL+ A ++FR +    L+PN+V  +  + 
Sbjct: 319 AELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLA 378

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC  G+  +A ++F  M      P+++++  L+ G+      + +I L + MK   +  
Sbjct: 379 SLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAA 438

Query: 448 DASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           D  + +I++   AK  +  +++  FT  +QQ
Sbjct: 439 DCRVFNILIHAYAKRGMVDDAMLIFTEMQQQ 469



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 166/341 (48%), Gaps = 3/341 (0%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           Q   + +   V TY+ ++   C A+  +    LF  ++  G++ + +T + ++  LC   
Sbjct: 147 QAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYAN 206

Query: 184 KMDEA-SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVF 240
           + +EA + LL  M + G  P+ F+Y+ +L G C       A +LF  M   G  C   V 
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVV 266

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I+G+ K  E   A SL+ EM  +G+KPDVV +N +   L +   +++A  +  +M
Sbjct: 267 AYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQM 326

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   DT TY   I G    G + EA ++F  ++      +I   NS +  LCK GR 
Sbjct: 327 TTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRS 386

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A E+F S+      P++V+Y  ++ G  ++G       LF  M+ N +  +   F++L
Sbjct: 387 KEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNIL 446

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I  + +       + +  +M++  V PD    S V+   ++
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSR 487



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 167/332 (50%), Gaps = 13/332 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVF 59
           MGR++       +++     P+   + S+I+G C    +++A  L +++   G   PD+ 
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIV 547

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            + +++N LC+    + A ++F ++    GE      P+ +T+T++IDG C  G +DKA 
Sbjct: 548 FFNSVINSLCKDGRVMDAHDIF-DLVTDIGE-----RPDVITFTSLIDGYCLVGKMDKAF 601

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           ++L  M+   ++ ++VTY++++ G+      N+   LF EM  +GV+PN VT+ +++  L
Sbjct: 602 KILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGL 661

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            + G+   A +    MI+ G       Y  +L G C   R N A E  +  + +G  +  
Sbjct: 662 FRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC---RNNCADEAIILFQKLGTMNVK 718

Query: 240 FSYSIL---INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           FS +IL   IN   K +  E A  L++ + + G+ P+   +  + + L +   VE A  +
Sbjct: 719 FSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNM 778

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           F  M+++G+   +      I  L + G I +A
Sbjct: 779 FSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 146/312 (46%), Gaps = 6/312 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V F S+I  LC + R+M+A  +F  +   G  PDV T+T+L++G C       A  +
Sbjct: 544 PDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKI 603

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M        V  E + VTY+T++DG  K G ++    L  +M+ K +KPN VTY  +
Sbjct: 604 LDAMEV------VGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G   A     A++ F EM++ G    V  + +I+  LC+N   DEA  L   +    V
Sbjct: 658 LAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNV 717

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +      NT+++      R   AKELF ++ + G      +Y ++I    K+  +E A +
Sbjct: 718 KFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANN 777

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++S M   GI P   + N +   L E  ++ +A     ++    +  +  T    +    
Sbjct: 778 MFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFS 837

Query: 321 KNGYIVEAVELF 332
           + G   E ++L 
Sbjct: 838 RKGKYHEDMKLL 849


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 155/496 (31%), Positives = 254/496 (51%), Gaps = 40/496 (8%)

Query: 6   HGFVVLGRIL----------KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG+  LGR+           K    P+ VT  S +  LC   R  EAA  F  +   G +
Sbjct: 343 HGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHK 402

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANG--------------NGEFGVV------ 94
           PD+F+Y TL++G          + LF  M +NG                + G+V      
Sbjct: 403 PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLI 462

Query: 95  --------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                     P+ VTY+T+I    + G +  A E   QM  + I+PN   Y+S+I+GFC 
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCM 522

Query: 147 AKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                +AK L  EM+++G+ +P++V F+ +++ LCK+G++ +A  + DL    G RP   
Sbjct: 523 HGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVI 582

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T+N+L+DG+CL G+++ A ++  +ME +G +  + +Y+ L++GY KN  I   L+L+ EM
Sbjct: 583 TFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREM 642

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             KG+KP+ V +  +  GLF   +   A K F EM  +G       Y   + GLC+N   
Sbjct: 643 QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCA 702

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA+ LF  L  +  +F I   N++I+ + K  R E A ELF ++    L+PN  TY +M
Sbjct: 703 DEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVM 762

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I  L  DG ++ A ++F  ME++ +VP     + +IR  +   E +K    L K+    +
Sbjct: 763 IINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRI 822

Query: 446 MPDASIVSIVVDLLAK 461
           + +AS  S+++ L ++
Sbjct: 823 LLEASTTSLMLSLFSR 838



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 251/528 (47%), Gaps = 68/528 (12%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R   G  + G IL++    D +T  +L+K LC  +R  EA   L  ++   GC P+  +Y
Sbjct: 172 RPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMAN--------------------GNGEFGVVC------ 95
           + ++  LC  S +  AL+L + MA                       GE G  C      
Sbjct: 232 SIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEM 291

Query: 96  -----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
                +P+ VTY  IID LCK   +DKA+ +L QM     +P+ VTY+ +I G+      
Sbjct: 292 TRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRL 351

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
            EA ++F EM  +G+ PN+VT N  +  LCK+G+  EA+   D M   G +PD F+Y TL
Sbjct: 352 KEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTL 411

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           L G+   G       LF SM+S G       ++ILI+ Y K   ++ A+ +++EM  +G+
Sbjct: 412 LHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGV 471

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            PDVV ++T+      + ++  A + F++M   G+  +T  Y + I G C +G +V+A E
Sbjct: 472 SPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKE 531

Query: 331 LFHTL------------------------RILKCE--FDIR----------AYNSLIDGL 354
           L   +                        R++     FD+            +NSLIDG 
Sbjct: 532 LVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGY 591

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C  G+++ A ++  ++    + P++VTY+ ++ G   +G+++    LF +M+   V PN 
Sbjct: 592 CLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNT 651

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +T+ +++ G  R        +  H+M E       SI  I++  L +N
Sbjct: 652 VTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 230/481 (47%), Gaps = 45/481 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN- 79
           P   T+  L+   C   R     ALF  +   G + D  T  TL+  LC  + T  A+N 
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN--IKPNVVTY 137
           L   M+    E G  C PN V+Y+ ++  LC      +A +LL  M  +     P+VV Y
Sbjct: 215 LLHRMS----ELG--CVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAY 268

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           ++VI GF    +  +A  LF EM  QGV+P+VVT+N+I+D LCK   MD+A  +L  M  
Sbjct: 269 STVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT 328

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G +PD  TY+ ++ G+   GR+  A ++F  M+  G    + + +  +   CK+   + 
Sbjct: 329 DGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKE 388

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLF------------VGLFE-----------------IH 288
           A   +  M +KG KPD+  + TL             +GLF                  IH
Sbjct: 389 AAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIH 448

Query: 289 Q------VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
                  V+ A  +F EMQ+ GV+ D  TY T I    + G + +A+E F+ +     + 
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQP 508

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           +   Y+S+I G C  G L  A EL   +   G+  P++V +S +I  LC DG++  A D+
Sbjct: 509 NTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDI 568

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F    +    P VITF+ LI G+  + +  K  ++L  M+ + V PD    + ++D   K
Sbjct: 569 FDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFK 628

Query: 462 N 462
           N
Sbjct: 629 N 629



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 226/505 (44%), Gaps = 52/505 (10%)

Query: 4   VSHGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 53
           V HGF   G   K+C            PD VT+  +I  LC    + +A  +  ++   G
Sbjct: 271 VIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDG 330

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
            +PD  TY+ +++G         A  +F EM     + G++  PN VT  + +  LCK G
Sbjct: 331 AQPDTVTYSCMIHGYATLGRLKEAAKMFREMK----KRGLI--PNIVTCNSFLASLCKHG 384

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
              +A E    M  K  KP++ +Y +++ G+     + +   LF  M   G+  N   F 
Sbjct: 385 RSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFT 444

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           +++    K G +D+A  +   M Q GV PD  TY+T++  F   GR+  A E F  M + 
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIHNTLFVGLFEIHQVER 292
           G +     YS +I G+C +  +  A  L SEM++KGI +PD+V  +++   L +  +V  
Sbjct: 505 GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMD 564

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  +FD     G      T+ + IDG C  G + +A ++   + ++  E DI  YN+L+D
Sbjct: 565 AHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLD 624

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI-------------------------- 386
           G  K+GR+   L LFR +    + PN VTY IM+                          
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684

Query: 387 ---------GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
                    GGLC +   D+A  LF  +    V  ++   + +I    ++    +  EL 
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF 744

Query: 438 HKMKEINVMPDASIVSIVVDLLAKN 462
             +    ++P+ S   +++  L K+
Sbjct: 745 ATISASGLLPNESTYGVMIINLLKD 769



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 192/393 (48%), Gaps = 5/393 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V    ++   + +   +PD VT++++I       R+ +A   F ++   G +P+   Y
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++++ G C     + A  L  EM N       +  P+ V ++++I+ LCK+G V  A ++
Sbjct: 514 SSIIQGFCMHGGLVKAKELVSEMINKG-----IPRPDIVFFSSVINSLCKDGRVMDAHDI 568

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
                D   +P V+T+ S+I G+C     ++A ++   M   GV+P++VT+N ++D   K
Sbjct: 569 FDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFK 628

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++++   L   M + GV+P+  TY  +L G    GR   A++ F  M   G   TV  
Sbjct: 629 NGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI 688

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y I++ G C+N   + A+ L+ ++ +  +K  + I NT+   ++++ + E A +LF  + 
Sbjct: 689 YGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATIS 748

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  +  TY   I  L K+G + +A  +F ++         R  N +I  L + G + 
Sbjct: 749 ASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIA 808

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
            A      +    ++    T S+M+      G+
Sbjct: 809 KAGNYLSKVDGKRILLEASTTSLMLSLFSRKGK 841



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 153/323 (47%), Gaps = 3/323 (0%)

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           E   Q   P   T+N++MD  C+  + D    L   +++ G++ D  T NTLL   C   
Sbjct: 147 EAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYAN 206

Query: 219 RVNHAKELFV-SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVV 275
           R   A  + +  M  +GC     SYSI++   C N   + AL L   M  +G    PDVV
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVV 266

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            ++T+  G F   +  +A  LF EM R GV  D  TY   ID LCK   + +A  +   +
Sbjct: 267 AYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQM 326

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                + D   Y+ +I G    GRL+ A ++FR +    L+PN+VT +  +  LC  G+ 
Sbjct: 327 TTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRS 386

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            +A + F  M      P++ ++  L+ G+      + +I L + MK   +  +  + +I+
Sbjct: 387 KEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTIL 446

Query: 456 VDLLAKNEISLNSLPSFTVHEQQ 478
           +   AK  +  +++  FT  +QQ
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQQQ 469



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 168/332 (50%), Gaps = 13/332 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVF 59
           MGR++       +++     P+   ++S+I+G C    +++A  L +++   G   PD+ 
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIV 547

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            +++++N LC+    + A ++F ++A   GE      P  +T+ ++IDG C  G +DKA 
Sbjct: 548 FFSSVINSLCKDGRVMDAHDIF-DLATDIGE-----RPGVITFNSLIDGYCLVGKMDKAF 601

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           ++L  M+   ++P++VTY +++ G+      N+   LF EM  +GV+PN VT+ +++  L
Sbjct: 602 KILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGL 661

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            + G+   A +    MI+ G       Y  +L G C   R N A E  +  + +G  +  
Sbjct: 662 FRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC---RNNCADEAIILFQKLGTMNVK 718

Query: 240 FSYSIL---INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           FS +IL   IN   K +  E A  L++ + + G+ P+   +  + + L +   VE A  +
Sbjct: 719 FSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNM 778

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           F  M+++G+   +      I  L + G I +A
Sbjct: 779 FSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 6/312 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V F+S+I  LC + R+M+A  +F      G  P V T+ +L++G C       A  +
Sbjct: 544 PDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKI 603

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M        V  EP+ VTY T++DG  K G ++    L  +M+ K +KPN VTY  +
Sbjct: 604 LDAMEV------VGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G   A     A++ F EM++ G    V  + +I+  LC+N   DEA  L   +    V
Sbjct: 658 LAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNV 717

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +      NT+++      R   AKELF ++ + G      +Y ++I    K+  +E A +
Sbjct: 718 KFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANN 777

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++S M   GI P   + N +   L E  ++ +A     ++    +  +  T    +    
Sbjct: 778 MFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFS 837

Query: 321 KNGYIVEAVELF 332
           + G   E ++L 
Sbjct: 838 RKGKYQEDIKLL 849


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 220/402 (54%), Gaps = 6/402 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+ +LI+GLC   R   A A+   +   GC PDV TYT L+   C+ S    A+ L
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKL 209

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM +        C P+ VTY  +++G+C+EG VD A E L  +     +PN V+Y  V
Sbjct: 210 LDEMRDKG------CAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIV 263

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G C A+ W +A++L  EM  +G  PNVVTFN+++  LC+ G ++ A  +LD + ++G 
Sbjct: 264 LKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGC 323

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P++ +YN +L  FC   +++ A      M S GC   + SY+ L+   C+  E++ A+ 
Sbjct: 324 TPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVE 383

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  ++  KG  P ++ +NT+  GL +  + E A +L +EM   G+  D  TY T   GLC
Sbjct: 384 LLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLC 443

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G I EA++ F  ++ +    +   YN+++ GLCK      A++LF  +     +PN  
Sbjct: 444 REGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNES 503

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           TY+I+I GL  +G + +AR++  ++    VV   +     IR
Sbjct: 504 TYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIR 545



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 225/434 (51%), Gaps = 14/434 (3%)

Query: 27  TSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
            +LIK LCA  R  EA  +        CEPDV +Y  +V G C T     A  L   M  
Sbjct: 94  AALIKKLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM 148

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                    EP+T TY T+I GLC  G  D A  +L  M  +   P+VVTYT ++   C 
Sbjct: 149 ---------EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCK 199

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              + +A +L  EM D+G  P++VT+NV+++ +C+ G++D+A   L  +  +G  P+  +
Sbjct: 200 RSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVS 259

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YN +L G C   R   A++L   M   G    V ++++LI+  C+   +E A+ +  ++ 
Sbjct: 260 YNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIP 319

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G  P+ + +N +     +  +++RA    + M  +G   D  +Y T +  LC+ G + 
Sbjct: 320 KYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVD 379

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            AVEL H L+   C   + +YN++IDGL K+G+ E ALEL   +    L P+++TYS + 
Sbjct: 380 AAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTIS 439

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC +G++++A   F  +++  + PN + ++ ++ G  +       I+L   M     M
Sbjct: 440 SGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCM 499

Query: 447 PDASIVSIVVDLLA 460
           P+ S  +I+++ LA
Sbjct: 500 PNESTYTILIEGLA 513



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 194/369 (52%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR  +   VL  +L+    PD VT+T L++  C  S   +A  L  ++R  GC PD+ TY
Sbjct: 166 GRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTY 225

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +VNG+C+      A+   + + +    +G  CEPNTV+Y  ++ GLC     + A++L
Sbjct: 226 NVVVNGICQEGRVDDAMEFLKSLPS----YG--CEPNTVSYNIVLKGLCTAERWEDAEKL 279

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M  K   PNVVT+  +I   C       A  +  ++   G  PN +++N I+   CK
Sbjct: 280 MAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCK 339

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             KMD A   ++LM+  G  PD  +YNTLL   C  G V+ A EL   ++  GC   + S
Sbjct: 340 QKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLIS 399

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K  + E AL L +EM++KG++PD++ ++T+  GL    ++E A K F ++Q
Sbjct: 400 YNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQ 459

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +T  Y   + GLCK      A++LF  +    C  +   Y  LI+GL   G ++
Sbjct: 460 DMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVK 519

Query: 362 IALELFRSL 370
            A E+   L
Sbjct: 520 EAREMMAEL 528


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 239/430 (55%), Gaps = 6/430 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +P   T+  +I  L  E  +  A +LF +++  G  PD+ TY +L++G  +      A+
Sbjct: 247 LSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAV 306

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++FEEM +        CEP+ +TY ++I+  CK   + +A E L  MK + ++PNVVTY+
Sbjct: 307 SVFEEMKDAG------CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYS 360

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I  FC A    EA + F++M+  G+QPN  T+  ++D  CK G ++EA +L   M Q 
Sbjct: 361 TLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQA 420

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV  +  TY  LLDG C  GR+  A+ELF ++   G       Y+ L +GY K K +E A
Sbjct: 421 GVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKA 480

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           + +  EM  K +KPD++++ T   GL   +++E +  +  EM   G+ A+++ Y T ID 
Sbjct: 481 MDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDA 540

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             K G   EAV L   ++ L  +  +  Y  LIDGLCK G ++ A+  F  +    L PN
Sbjct: 541 YFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPN 600

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           ++ Y+ +I GLC +  +++A++LF +M +  + P+ + +  LI G ++   P + + L +
Sbjct: 601 IMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRN 660

Query: 439 KMKEINVMPD 448
           +M EI +  D
Sbjct: 661 RMVEIGMELD 670



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 220/438 (50%), Gaps = 8/438 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   +   L+  L   S+   A + F  + V G  P VFTY  ++  L R      A +L
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL 273

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           FEEM A G         P+ VTY ++IDG  K G +  A  +  +MKD   +P+V+TY S
Sbjct: 274 FEEMKAKG-------LRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNS 326

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I  FC  +   +A      M  +G+QPNVVT++ ++D  CK G + EA++    MI+ G
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           ++P+ FTY +L+D  C  G +N A +L   M+  G    + +Y+ L++G C++  +  A 
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  +L  G   +  I+ +LF G  +   +E+A  + +EM +  +  D   Y T I GL
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C+   I +++ +   +       +   Y +LID   K G+   A+ L + +    +   V
Sbjct: 507 CRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITV 566

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTY ++I GLC  G + +A   F  M  N + PN++ +  LI G  + +   +   L ++
Sbjct: 567 VTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNE 626

Query: 440 MKEINVMPDASIVSIVVD 457
           M +  + PD  + + ++D
Sbjct: 627 MLDKGISPDKLVYTSLID 644



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 218/440 (49%), Gaps = 18/440 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   F  L  + +    P+ VT+++LI   C    ++EA   F  +   G +P+ FTYT
Sbjct: 336 RIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYT 395

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++  C+      A  L  EM             N VTYT ++DGLC++G + +A+EL 
Sbjct: 396 SLIDANCKIGDLNEAFKLESEMQQAGVNL------NIVTYTALLDGLCEDGRMREAEELF 449

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             +       N   YTS+  G+  AK   +A  +  EM  + ++P+++ +   +  LC+ 
Sbjct: 450 GALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQ 509

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            +++++  ++  M+  G+  +++ Y TL+D +   G+   A  L   M+ +G K TV +Y
Sbjct: 510 NEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTY 569

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
            +LI+G CK   ++ A+  +  M   G++P+++I+  L  GL +   +E A  LF+EM  
Sbjct: 570 GVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLD 629

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G++ D   Y + IDG  K+G   EA+ L + +  +  E D+ AY SLI G  + G++++
Sbjct: 630 KGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQL 689

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  L   +    ++P+ V    ++      G +++A  L  DM              LI 
Sbjct: 690 AKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG----------LIS 739

Query: 423 GFIRINEPS--KVIELLHKM 440
           G I I  PS    +  LHK+
Sbjct: 740 GTIDITVPSCLTAVTKLHKL 759



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 185/364 (50%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           VC P    + T+ + L   G +++A++   +M    + P V +   ++     +     A
Sbjct: 176 VCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
              F +M+  G+ P+V T+N+++  L + G ++ A  L + M   G+RPD  TYN+L+DG
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +   G +  A  +F  M+  GC+  V +Y+ LIN +CK + I  A      M  +G++P+
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV ++TL     +   +  A K F +M R G+  + +TY + ID  CK G + EA +L  
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            ++      +I  Y +L+DGLC+ GR+  A ELF +L       N   Y+ +  G     
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAK 475

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            M+KA D+  +M +  + P+++ +   I G  R NE    + ++ +M +  +  ++ I +
Sbjct: 476 MMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYT 535

Query: 454 IVVD 457
            ++D
Sbjct: 536 TLID 539



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 161/338 (47%), Gaps = 29/338 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G ++  F +   + ++    + VT+T+L+ GLC + R+ EA  LF  L   G   +   
Sbjct: 404 IGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQI 463

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGN----------------------GEFGVVCE-- 96
           YT+L +G  +      A+++ EEM   N                          V+ E  
Sbjct: 464 YTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM 523

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                 N+  YTT+ID   K G   +A  LL +M+D  IK  VVTY  +I G C      
Sbjct: 524 DCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQ 583

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A R F  M   G+QPN++ +  ++D LCKN  ++EA  L + M+  G+ PD   Y +L+
Sbjct: 584 QAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLI 643

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG    G    A  L   M  +G +  + +Y+ LI G+ +  +++ A SL  EML KGI 
Sbjct: 644 DGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGII 703

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           PD V+   L    +E+  +  A  L D+M R G+ + T
Sbjct: 704 PDQVLCICLLRKYYELGDINEALALHDDMARRGLISGT 741


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/412 (34%), Positives = 226/412 (54%), Gaps = 11/412 (2%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCK 111
           GC+P V TYT L+  +C++S    A+N+ +EM A G       C PN VTY  II+G+C+
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG-------CTPNIVTYNVIINGMCR 234

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
           EG VD AKE+L ++     +P++V+YT+V++G C A+ W++ K LF EM+D+   PN VT
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           F++++   C+ G ++ A ++L  M QHG  P+    N +++  C  GRV+ A +   +M 
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             GC     SY+ ++ G C+    E A  L  EM+ K   P+ V  NT    L +   +E
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           +A KL + M   G +    TY   + G C  G +  A+ELF+    L CE +   Y +L+
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN---LPCEPNTITYTTLL 471

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GLC + RL+ A EL   +       N VT+++++   C  G +++A +L   M E+   
Sbjct: 472 TGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 531

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           PN+ITF+ L+ G  +     + +ELLH +    V  D    S VVD+L++ +
Sbjct: 532 PNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRED 583



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/423 (32%), Positives = 220/423 (52%), Gaps = 9/423 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L R+    F PD V++T+++KGLCA  R  +   LF ++    C P+  T+
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV   CR      A+ + ++M+         C PNT     +I+ +CK+G VD A + 
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHG------CTPNTTLCNIVINAICKQGRVDDAYDF 349

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      P+ ++YT+V+RG C A  W  AK L  EM+ +   PN VTFN  +  LC+
Sbjct: 350 LNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQ 409

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +++A +L++LM ++G      TYN L+ GFC+ GRV+ A ELF    ++ C+    +
Sbjct: 410 KGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF---NNLPCEPNTIT 466

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+ G C  + ++ A  L +EM+ K    + V  N L     +   VE A +L ++M 
Sbjct: 467 YTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMM 526

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   +  T+ T +DG+ K+    EA+EL H L       D   Y+S++D L +  R E
Sbjct: 527 EHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTE 586

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+++  ++    + P V  Y+ ++  LC   + D+A D F  M  N  +PN  T+ +LI
Sbjct: 587 EAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 646

Query: 422 RGF 424
            G 
Sbjct: 647 EGL 649



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 184/373 (49%), Gaps = 38/373 (10%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M  +  +P+VVTYT ++   C +  + EA  +  EM  +G  PN+VT+NVI++ +C+ G+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDG------------------------------- 213
           +D+A  +L+ +  +G +PD  +Y T+L G                               
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 214 ----FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
               FC  G V  A ++   M   GC       +I+IN  CK   ++ A    + M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
             PD + + T+  GL    + E A +L  EM R     +  T+ TFI  LC+ G I +A+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           +L   +    C   I  YN+L+ G C  GR++ ALELF +LPC    PN +TY+ ++ GL
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 474

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C+  ++D A +L  +M +     N +TF++L+  F +     + +EL+++M E    P+ 
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 450 SIVSIVVDLLAKN 462
              + ++D + K+
Sbjct: 535 ITFNTLLDGITKD 547



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 166/359 (46%), Gaps = 38/359 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     VL ++ +   TP+      +I  +C + R+ +A      + ++GC PD  +Y
Sbjct: 306 GMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISY 365

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TT++ GLCR      A  L  EM   N      C PN VT+ T I  LC++G +++A +L
Sbjct: 366 TTVLRGLCRAGRWEHAKELLPEMVRKN------CPPNEVTFNTFICILCQKGLIEQAIKL 419

Query: 122 LLQMKDKNI--------------------------------KPNVVTYTSVIRGFCYAKD 149
           +  M +                                   +PN +TYT+++ G C+A+ 
Sbjct: 420 IELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAER 479

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
            + A  L  EM+ +    N VTFNV++   C+ G ++EA  L++ M++HG  P+  T+NT
Sbjct: 480 LDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNT 539

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           LLDG         A EL   + S G      +YS +++   +    E A+ +   +   G
Sbjct: 540 LLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMG 599

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           ++P V ++N +   L +  + ++A   F  M  NG   +  TY   I+GL   G + EA
Sbjct: 600 MRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 658



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 151/304 (49%), Gaps = 9/304 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR  H   +L  +++    P+ VTF + I  LC +  I +A  L   +  +GC   + TY
Sbjct: 376 GRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTY 435

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+G C       AL LF  +          CEPNT+TYTT++ GLC    +D A EL
Sbjct: 436 NALVHGFCVQGRVDSALELFNNLP---------CEPNTITYTTLLTGLCHAERLDAAAEL 486

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  K+   N VT+  ++  FC      EA  L  +MM+ G  PN++TFN ++D + K
Sbjct: 487 LAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITK 546

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +   +EA  LL  ++  GV  D  TY++++D      R   A ++  +++ MG +  V  
Sbjct: 547 DCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGM 606

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++   CK  E + A+  ++ M+S G  P+   +  L  GL     ++ A  +  E+ 
Sbjct: 607 YNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELY 666

Query: 302 RNGV 305
             GV
Sbjct: 667 AKGV 670



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 111/236 (47%)

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G   T   +  +    +M   GC+ +V +Y++L+   CK+     A+++  EM +KG  P
Sbjct: 161 GASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP 220

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           ++V +N +  G+    +V+ A ++ + +   G   D  +Y T + GLC      +   LF
Sbjct: 221 NIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLF 280

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +   KC  +   ++ L+   C+ G +E A+++ + +      PN    +I+I  +C  
Sbjct: 281 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 340

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           G++D A D   +M      P+ I++  ++RG  R        ELL +M   N  P+
Sbjct: 341 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN 396


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 238/436 (54%), Gaps = 7/436 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+      PD  TFT  +K  C  SR   A  L   +   GCE     Y T++ G    +
Sbjct: 136 RMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEEN 195

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           H + A  LFEEM       G+   P+ + +  +I  LC++G V +++ LL ++  + + P
Sbjct: 196 HRVEAHELFEEM------LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSP 249

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N+ T    I+GFC     NEA RL ++ + +G+ P+V+T+N ++  LCKN K+ EA   L
Sbjct: 250 NLFTVNIFIQGFCQRAMLNEAIRL-LDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYL 308

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  G  PD FTYN+++DG+C  G + +A ++       G      +Y  LING C++
Sbjct: 309 RKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQD 368

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +I+ A+++++E + KG+KP++V+ NTL  GL +   + +A KL +EM  NG + D WTY
Sbjct: 369 GDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTY 428

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+GLCK G + +A  L           D+  +N+LIDG CK  +L+ A+E+   +  
Sbjct: 429 NLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWN 488

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + P+V+TY+ ++ GLC  G+ +     F  M E   VPN+IT+++L   F +  +  +
Sbjct: 489 HGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEE 548

Query: 433 VIELLHKMKEINVMPD 448
            + L+ +M+   + PD
Sbjct: 549 ALNLIEEMQNKGLTPD 564



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 223/432 (51%), Gaps = 9/432 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            TPD +T+ +LI GLC   +++EA     K+   G EPD FTY ++++G C+      A 
Sbjct: 281 LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNAD 340

Query: 79  NLFEEMANGNGEF-GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
            +  +     G F G V  P+  TY ++I+GLC++G +D+A  +  +  +K +KPN+V  
Sbjct: 341 QILRD-----GAFKGFV--PDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLC 393

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            ++++G        +A +L  EM + G  P++ T+N++++ LCK G + +A  L+   I 
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G  PD FT+NTL+DG+C   ++++A E+   M + G    V +Y+ ++NG CK  + E 
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYED 513

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
            +  +  M+ KG  P+++ +N L     +  +VE A  L +EMQ  G+  D   + T + 
Sbjct: 514 VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573

Query: 318 GLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           G C NG +  A +LF  +    K    I  YN +I+       + +A +LF  +      
Sbjct: 574 GFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFS 633

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+  TY +MI G C  G ++      L   E  ++P++ TF  ++          + + +
Sbjct: 634 PDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGI 693

Query: 437 LHKMKEINVMPD 448
           +H M    ++P+
Sbjct: 694 IHLMVHKGIVPE 705



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 227/459 (49%), Gaps = 8/459 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L ++LK   +P+  T    I+G C  + + EA  L   +   G  PDV TY
Sbjct: 230 GHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITY 288

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GLC+    + A +   +M N         EP+  TY +IIDG CK G +  A ++
Sbjct: 289 NTLICGLCKNFKVVEAEHYLRKMVNEG------YEPDGFTYNSIIDGYCKLGMMQNADQI 342

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L     K   P+  TY S+I G C   D + A  +F E M++G++PN+V  N ++  L +
Sbjct: 343 LRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQ 402

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A +L++ M ++G  PD +TYN +++G C  G V+ A  L +   + G    VF+
Sbjct: 403 QGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFT 462

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+GYCK  +++ A+ +   M + G+ PDV+ +N++  GL +  + E     F  M 
Sbjct: 463 FNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMM 522

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   +  TY    +  CK   + EA+ L   ++      D+  + +L+ G C +G L+
Sbjct: 523 EKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLD 582

Query: 362 IALELFRSLPCGVLVPN-VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A +LF+ +       + + TY+IMI        M+ A  LF  M EN   P+  T+ ++
Sbjct: 583 GAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVM 642

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           I GF +    +     L    E  ++P  +    V++ L
Sbjct: 643 IDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 231/453 (50%), Gaps = 9/453 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD + F  LI  LC +  + E+  L  K+   G  P++FT    + G C+ +    A+ L
Sbjct: 214 PDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRL 273

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + +  G         P+ +TY T+I GLCK   V +A+  L +M ++  +P+  TY S+
Sbjct: 274 LDGVGRG-------LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C       A ++  +   +G  P+  T+  +++ LC++G +D A  + +  ++ G+
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P+    NTL+ G    G +  A +L   M   GC   +++Y+++ING CK   +  A +
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  + ++KG  PDV   NTL  G  +  +++ A ++ D M  +GV+ D  TY + ++GLC
Sbjct: 447 LVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC 506

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G   + +  F  +    C  +I  YN L +  CK+ ++E AL L   +    L P+VV
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVV 566

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI-TFDMLIRGFIRINEPSKVIELLHK 439
            +  ++ G C++G +D A  LF  ++E     + I T++++I  F      +   +L +K
Sbjct: 567 NFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNK 626

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           M E    PD+    +++D   K   ++NS  SF
Sbjct: 627 MCENGFSPDSYTYRVMIDGFCKTG-NINSGYSF 658



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 221/462 (47%), Gaps = 12/462 (2%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L +++   + PD  T+ S+I G C    +  A  +       G  PD  TY +L+NGLC+
Sbjct: 308 LRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQ 367

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 A+N+F E      E G+  +PN V   T++ GL ++G + +A +L+ +M +   
Sbjct: 368 DGDIDRAINVFNEAM----EKGL--KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGC 421

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            P++ TY  VI G C     ++A  L I+ + +G  P+V TFN ++D  CK  K+D A  
Sbjct: 422 SPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIE 481

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           ++D M  HGV PD  TYN++L+G C  G+       F  M   GC   + +Y+IL   +C
Sbjct: 482 IVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFC 541

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT- 309
           K +++E AL+L  EM +KG+ PDVV   TL  G  +   ++ A++LF  +      + T 
Sbjct: 542 KARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTI 601

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I+       +  A +LF+ +       D   Y  +IDG CK+G +         
Sbjct: 602 ATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLV 661

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
                L+P++ T+  ++  LC   ++ +A  +   M    +VP V+   +       +  
Sbjct: 662 KIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN-TIFEADKKEVAA 720

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
           P  V+E L K   I          I+ D +   ++S   LP+
Sbjct: 721 PKIVVENLMKKGHITYFA----YEILHDGIRDKKLSRKKLPT 758



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 170/336 (50%), Gaps = 9/336 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V    ++    P+ V   +L+KGL  +  I++A  L  ++   GC PD++TY
Sbjct: 369 GDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTY 428

Query: 62  TTLVNGLCRTSHTIVALNL-FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             ++NGLC+      A NL  + +A G+        P+  T+ T+IDG CK+  +D A E
Sbjct: 429 NLVINGLCKIGCVSDADNLVIDAIAKGH-------LPDVFTFNTLIDGYCKKLKLDNAIE 481

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++ +M +  + P+V+TY S++ G C A  + +    F  MM++G  PN++T+N++ +  C
Sbjct: 482 IVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFC 541

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTV 239
           K  K++EA  L++ M   G+ PD   + TL+ GFC  G ++ A +LF  + E     HT+
Sbjct: 542 KARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTI 601

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+I+IN +     +  A  L+++M   G  PD   +  +  G  +   +   +     
Sbjct: 602 ATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLV 661

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
               G+     T+   ++ LC    + EAV + H +
Sbjct: 662 KIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLM 697



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 196/399 (49%), Gaps = 39/399 (9%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV--TYTSVIRGFCYAKDWNEAKRLF 157
           +TY  +I+ L   G  +  +E+L + +  NI   ++   Y   +R +       EA  +F
Sbjct: 41  LTYKGMIEKLGFHGEFEAMEEVLAETR-MNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVF 99

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M     +P+V ++N IM+ L +    D+A ++   M   G+ PD +T+   +  FC T
Sbjct: 100 ERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRT 159

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILING-YCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            R + A+ L  +M S GC+ +  +Y  +I G Y +N  +E A  L+ EML  GI PD++ 
Sbjct: 160 SRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE-AHELFEEMLGLGICPDIMA 218

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL----- 331
            N L   L     V+ + +L +++ + GV+ + +T   FI G C+   + EA+ L     
Sbjct: 219 FNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG 278

Query: 332 ---------FHTL--------RILKCEFDIR------------AYNSLIDGLCKSGRLEI 362
                    ++TL        ++++ E  +R             YNS+IDG CK G ++ 
Sbjct: 279 RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQN 338

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A ++ R       VP+  TY  +I GLC DG +D+A ++F +  E  + PN++  + L++
Sbjct: 339 ADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVK 398

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           G  +     + ++L+++M E    PD    ++V++ L K
Sbjct: 399 GLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCK 437


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 137/417 (32%), Positives = 228/417 (54%), Gaps = 15/417 (3%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  ++ ++R  G + DV+TYT  +   C+T+    AL L   M     E G  C+ N V
Sbjct: 129 QAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMP----ELG--CDSNAV 182

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            Y T++ GL   G  D A+EL  +M  + + P+VV +  ++   C      E++RL  ++
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMD---------EASRLLDLMIQHGVRPDAFTYNTLL 211
           + +GV PN+ TFN+ +  LC+ G +D         EA   L  M+  G  PD  TYN+++
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+C  G V  A  +       G K   F+Y  LING+CK+ + + A++++ + L KG++
Sbjct: 303 DGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLR 362

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P +V++NTL  GL +   +  A +L +EM  NG   + WTY   I+GLCK G + +A  L
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
                   C  DI  YN+LIDG CK  +L+ A E+   +    + P+V+TY+ ++ GLC 
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            G+ ++  ++F  MEE    PN+IT+++++    +  + ++ ++LL +MK   + PD
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 238/468 (50%), Gaps = 16/468 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G   H   +   +L  C  PD V F  L+  LC +  + E+  L  K+   G  P++FT+
Sbjct: 195 GEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTF 254

Query: 62  TTLVNGLCR---------TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
              V GLCR          S  + A     +M NG        EP+ +TY +IIDG CK+
Sbjct: 255 NIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGG------FEPDDLTYNSIIDGYCKK 308

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G V  A  +L     K  KP+  TY S+I GFC   D + A  +F + + +G++P++V +
Sbjct: 309 GMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLY 368

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++  L + G +  A +L++ M ++G  P+ +TYN +++G C  G V+ A  L     +
Sbjct: 369 NTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIA 428

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            GC   +F+Y+ LI+GYCK  +++ A  + + M S+G+ PDV+ +NTL  GL +  + E 
Sbjct: 429 KGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEE 488

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
             ++F  M+  G   +  TY   +D LCK   + EAV+L   ++    + D+ ++ +L  
Sbjct: 489 VMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFT 548

Query: 353 GLCKSGRLEIALELFRSLPCGVLV-PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           G CK G ++ A +LFR +     V     TY+I++        M+ A  LF  M+ +   
Sbjct: 549 GFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCD 608

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           P+  T+ ++I GF ++   ++  + L +  E   +P  +    V++ L
Sbjct: 609 PDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCL 656



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 233/451 (51%), Gaps = 16/451 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T+T  IK  C  +R   A  L   +   GC+ +   Y T+V GL  +     A  LF
Sbjct: 145 DVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELF 204

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM         +C P+ V +  ++  LCK+G V +++ LL ++  + + PN+ T+   +
Sbjct: 205 DEMLA-----RCLC-PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFV 258

Query: 142 RGFCYAKDWN---------EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +G C     +         EA+    +M++ G +P+ +T+N I+D  CK G + +A+R+L
Sbjct: 259 QGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVL 318

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
              +  G +PD FTY +L++GFC  G  + A  +F      G + ++  Y+ LI G  + 
Sbjct: 319 KDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQ 378

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             I  AL L +EM   G  P++  +N +  GL ++  V  A  L D+    G   D +TY
Sbjct: 379 GLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTY 438

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T IDG CK   +  A E+ + +       D+  YN+L++GLCK+G+ E  +E+F+++  
Sbjct: 439 NTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE 498

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               PN++TY+I++  LC   ++++A DL  +M+   + P+V++F  L  GF +I +   
Sbjct: 499 KGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDG 558

Query: 433 VIELLHKM-KEINVMPDASIVSIVVDLLAKN 462
             +L  +M K+ +V    +  +I+V   ++ 
Sbjct: 559 AYQLFRRMEKQYDVCHTTATYNIIVSAFSEQ 589



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 161/321 (50%), Gaps = 14/321 (4%)

Query: 1   MGRVSHG-FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           MG VS    +V   I K C  PD  T+ +LI G C + ++  A  +  ++   G  PDV 
Sbjct: 413 MGCVSDASHLVDDAIAKGC-PPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVI 471

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY TL+NGLC+   +   + +F+ M          C PN +TY  I+D LCK   V++A 
Sbjct: 472 TYNTLLNGLCKAGKSEEVMEIFKAMEEKG------CTPNIITYNIIVDSLCKAKKVNEAV 525

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDE 178
           +LL +MK K +KP+VV++ ++  GFC   D + A +LF  M  Q  V     T+N+I+  
Sbjct: 526 DLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSA 585

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
             +   M+ A +L  +M   G  PD +TY  ++DGFC  G +    +  +         +
Sbjct: 586 FSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPS 645

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           + ++  ++N  C   ++  A+ +   ML KGI P+ V  NT+F    ++    +   L +
Sbjct: 646 LTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFEADKKVVAAPKI--LVE 701

Query: 299 EMQRNGVAADTWTYRTFIDGL 319
           ++ + G  A  +TY    DG+
Sbjct: 702 DLLKKGHIA-YYTYELLYDGI 721



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 178/372 (47%), Gaps = 12/372 (3%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV--TYTSVIRGFCYAKDWNEAKRLFI 158
           TY  I+  L   G  ++ ++LL +M++ N+   ++   Y   ++ +       EA   F 
Sbjct: 42  TYKCIVQKLGHHGEFEEMEKLLSEMRE-NVNNALLEGAYIEAMKNYGRKGKVQEAVDTFE 100

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            M      P+V + N IM+ L + G  ++A ++   M   GV+ D +TY   +  FC T 
Sbjct: 101 RMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTA 160

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           R   A  L  +M  +GC     +Y  ++ G   + E + A  L+ EML++ + PDVV  N
Sbjct: 161 RPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFN 220

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG---------YIVEAV 329
            L   L +   V  + +L  ++ + GV  + +T+  F+ GLC+ G          +VEA 
Sbjct: 221 KLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAE 280

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           E    +     E D   YNS+IDG CK G ++ A  + +        P+  TY  +I G 
Sbjct: 281 EYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGF 340

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C DG  D+A  +F D     + P+++ ++ LI+G  +       ++L+++M E   +P+ 
Sbjct: 341 CKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNI 400

Query: 450 SIVSIVVDLLAK 461
              ++V++ L K
Sbjct: 401 WTYNLVINGLCK 412



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 113/281 (40%), Gaps = 46/281 (16%)

Query: 223 AKELFVSMESM-GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS-------------- 267
           A E+F S +S  G KHT  +Y  ++     + E E    L SEM                
Sbjct: 23  ALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEA 82

Query: 268 ------KG----------------IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
                 KG                  P V  HN +   L E     +A K++  M+  GV
Sbjct: 83  MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGV 142

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
            +D +TY   I   CK      A+ L   +  L C+ +  AY +++ GL  SG  + A E
Sbjct: 143 QSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARE 202

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           LF  +    L P+VV ++ ++  LC  G + ++  L   + +  V PN+ TF++ ++G  
Sbjct: 203 LFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLC 262

Query: 426 RINEPSKVI---------ELLHKMKEINVMPDASIVSIVVD 457
           R     + +         E L KM      PD    + ++D
Sbjct: 263 REGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIID 303


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 134/410 (32%), Positives = 229/410 (55%), Gaps = 9/410 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + +   VL R+      PD VT+ ++++ LC   ++ +A  +  +     C PDV TY
Sbjct: 198 GEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITY 254

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+   C+ S    A+ L +EM N   +      P+ VTY  +I+G+CKEG +D+A + 
Sbjct: 255 TILIEATCKESGVGQAMKLLDEMRNKGSK------PDVVTYNVLINGICKEGRLDEAIKF 308

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M     +PNV+T+  ++R  C    W +A++L  +M+ +G  P+VVTFN++++ LC+
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 368

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +  A  +L+ M  HG  P++ +YN LL GFC   +++ A E    M S GC   + +
Sbjct: 369 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+   CK+ +++ A+ + +++ SKG  P ++ +NT+  GL ++ + ERA KL DEM+
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G+  D  TY + + GL + G + EA++ FH L  L    +   YNS++ GLCKS + +
Sbjct: 489 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 548

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            A++    +      P   TY+I+I G+  +G   +A DL  ++    +V
Sbjct: 549 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 248/468 (52%), Gaps = 9/468 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF  L  ++     PD +  TSLI+G C   +  +A  +   L   G  PDV TY
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 187

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C++     AL + + M            P+ VTY TI+  LC  G + +A E+
Sbjct: 188 NVLISGYCKSGEIDNALQVLDRMN---------VAPDVVTYNTILRTLCDSGKLKQAMEV 238

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +   K   P+V+TYT +I   C      +A +L  EM ++G +P+VVT+NV+++ +CK
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA + L+ M  +G +P+  T+N +L   C TGR   A++L   M   GC  +V +
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILIN  C+   +  A+ +  +M   G  P+ + +N L  G  +  +++RA +  D M 
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY T +  LCK+G +  AVE+ + L    C   +  YN++IDGL K G+ E
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++L   +    L P+++TYS ++ GL  +G++D+A   F D+E   + PN IT++ ++
Sbjct: 479 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 538

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            G  +  +  + I+ L  M      P  +  +I+++ +A   ++  +L
Sbjct: 539 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 586



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 236/458 (51%), Gaps = 9/458 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      V+  + +S   PD +T+  LI G C    I  A  +  ++ V    PDV T
Sbjct: 162 IGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNV---APDVVT 218

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++  LC +     A+ + +       +    C P+ +TYT +I+  CKE  V +A +
Sbjct: 219 YNTILRTLCDSGKLKQAMEVLDR------QLQKECYPDVITYTILIEATCKESGVGQAMK 272

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M++K  KP+VVTY  +I G C     +EA +    M   G QPNV+T N+I+  +C
Sbjct: 273 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 332

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+  +A +LL  M++ G  P   T+N L++  C  G +  A ++   M   GC     
Sbjct: 333 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 392

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ L++G+CK K+++ A+     M+S+G  PD+V +NTL   L +  +V+ A ++ +++
Sbjct: 393 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 452

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G +    TY T IDGL K G    A++L   +R    + DI  Y+SL+ GL + G++
Sbjct: 453 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 512

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A++ F  L    + PN +TY+ ++ GLC   Q D+A D    M      P   T+ +L
Sbjct: 513 DEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTIL 572

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           I G        + ++LL+++    ++  +S   + V +
Sbjct: 573 IEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 610



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 188/388 (48%), Gaps = 38/388 (9%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           L + G ++   + L  M  +   P+++  TS+IRGFC      +A  +   +   G  P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           V+T+NV++   CK+G++D A ++LD M    V PD  TYNT+L   C +G++  A E+  
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
                 C   V +Y+ILI   CK   +  A+ L  EM +KG KPDVV +N L  G+ +  
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 289 QVERAF-----------------------------------KLFDEMQRNGVAADTWTYR 313
           +++ A                                    KL  +M R G +    T+ 
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I+ LC+ G +  A+++   + +  C  +  +YN L+ G CK  +++ A+E    +   
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P++VTY+ ++  LC DG++D A ++   +      P +IT++ +I G  ++ +  + 
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
           I+LL +M+   + PD    S +V  L++
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSR 508


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 134/410 (32%), Positives = 229/410 (55%), Gaps = 9/410 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + +   VL R+      PD VT+ ++++ LC   ++ +A  +  +     C PDV TY
Sbjct: 141 GEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITY 197

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+   C+ S    A+ L +EM N   +      P+ VTY  +I+G+CKEG +D+A + 
Sbjct: 198 TILIEATCKESGVGQAMKLLDEMRNKGSK------PDVVTYNVLINGICKEGRLDEAIKF 251

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M     +PNV+T+  ++R  C    W +A++L  +M+ +G  P+VVTFN++++ LC+
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 311

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +  A  +L+ M  HG  P++ +YN LL GFC   +++ A E    M S GC   + +
Sbjct: 312 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+   CK+ +++ A+ + +++ SKG  P ++ +NT+  GL ++ + ERA KL DEM+
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G+  D  TY + + GL + G + EA++ FH L  L    +   YNS++ GLCKS + +
Sbjct: 432 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 491

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            A++    +      P   TY+I+I G+  +G   +A DL  ++    +V
Sbjct: 492 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 248/468 (52%), Gaps = 9/468 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF  L  ++     PD +  TSLI+G C   +  +A  +   L   G  PDV TY
Sbjct: 71  GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 130

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C++     AL + + M            P+ VTY TI+  LC  G + +A E+
Sbjct: 131 NVLISGYCKSGEIDNALQVLDRMN---------VAPDVVTYNTILRTLCDSGKLKQAMEV 181

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +   K   P+V+TYT +I   C      +A +L  EM ++G +P+VVT+NV+++ +CK
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA + L+ M  +G +P+  T+N +L   C TGR   A++L   M   GC  +V +
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ILIN  C+   +  A+ +  +M   G  P+ + +N L  G  +  +++RA +  D M 
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY T +  LCK+G +  AVE+ + L    C   +  YN++IDGL K G+ E
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++L   +    L P+++TYS ++ GL  +G++D+A   F D+E   + PN IT++ ++
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 481

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            G  +  +  + I+ L  M      P  +  +I+++ +A   ++  +L
Sbjct: 482 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 529



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 236/458 (51%), Gaps = 9/458 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      V+  + +S   PD +T+  LI G C    I  A  +  ++ V    PDV T
Sbjct: 105 IGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNV---APDVVT 161

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++  LC +     A+ + +       +    C P+ +TYT +I+  CKE  V +A +
Sbjct: 162 YNTILRTLCDSGKLKQAMEVLDR------QLQKECYPDVITYTILIEATCKESGVGQAMK 215

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M++K  KP+VVTY  +I G C     +EA +    M   G QPNV+T N+I+  +C
Sbjct: 216 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 275

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+  +A +LL  M++ G  P   T+N L++  C  G +  A ++   M   GC     
Sbjct: 276 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 335

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ L++G+CK K+++ A+     M+S+G  PD+V +NTL   L +  +V+ A ++ +++
Sbjct: 336 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 395

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G +    TY T IDGL K G    A++L   +R    + DI  Y+SL+ GL + G++
Sbjct: 396 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 455

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A++ F  L    + PN +TY+ ++ GLC   Q D+A D    M      P   T+ +L
Sbjct: 456 DEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTIL 515

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           I G        + ++LL+++    ++  +S   + V +
Sbjct: 516 IEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 553



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 188/388 (48%), Gaps = 38/388 (9%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           L + G ++   + L  M  +   P+++  TS+IRGFC      +A  +   +   G  P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           V+T+NV++   CK+G++D A ++LD M    V PD  TYNT+L   C +G++  A E+  
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
                 C   V +Y+ILI   CK   +  A+ L  EM +KG KPDVV +N L  G+ +  
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 289 QVERAF-----------------------------------KLFDEMQRNGVAADTWTYR 313
           +++ A                                    KL  +M R G +    T+ 
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I+ LC+ G +  A+++   + +  C  +  +YN L+ G CK  +++ A+E    +   
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P++VTY+ ++  LC DG++D A ++   +      P +IT++ +I G  ++ +  + 
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
           I+LL +M+   + PD    S +V  L++
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSR 451


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 153/482 (31%), Positives = 250/482 (51%), Gaps = 32/482 (6%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
            V + R       P+AV++T++++GLCA  R  EA AL   ++  G   DV TY TL+ G
Sbjct: 108 LVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRG 167

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVC-----------------------------EPN 98
           LC  S    AL L +EM     +  VV                              +P+
Sbjct: 168 LCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPD 227

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
            + +T +ID LCKEG   KA ++   M  + ++PNVVTY  +I   C      EA  L  
Sbjct: 228 VIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRK 287

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCL 216
           EM D+GV P+VVT+N ++  L    +MDEA   L+ MIQ    V PD  T+N+++ G C 
Sbjct: 288 EMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCK 347

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR+  A ++   M   GC   + +Y+ LI G+ +  +++ A++L  E+   G++PD   
Sbjct: 348 IGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFT 407

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           ++ L  G  ++ +V+RA K    M++ G+ A+ + Y   +  +C+ G +  A+ LF+ + 
Sbjct: 408 YSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD 467

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C  D  AY+++I G CKSG ++   +L + +    L P+ VTYS++I      G ++
Sbjct: 468 K-NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLE 526

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A  +   M  +  VP+V  FD LI+G+    +  KV++L+H+M+  NV  D  I+S ++
Sbjct: 527 EAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586

Query: 457 DL 458
            L
Sbjct: 587 RL 588



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 229/465 (49%), Gaps = 52/465 (11%)

Query: 39  IMEAAALFTKLRVFGCEPDV---FTYTTLVNGLCRTS--HTIVALNLFEEMANGNGEFGV 93
           + EA +L + L      PDV    +Y T++  LCR    H   A +L  +M+    E   
Sbjct: 67  VTEACSLLSAL------PDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSR---EAHP 117

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
              PN V+YTT++ GLC      +A  LL  M+   ++ +VVTY ++IRG C A + + A
Sbjct: 118 AARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAA 177

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             L  EM   GVQPNVV ++ ++   C++G+  +  ++ + M + G++PD   +  L+D 
Sbjct: 178 LELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDD 237

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C  G+   A ++   M   G +  V +Y++LIN  CK   +  AL+L  EM  KG+ PD
Sbjct: 238 LCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPD 297

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNG--VAADTWTYRTFIDGLCKNGYIVEAVEL 331
           VV +NTL  GL  + +++ A    +EM +    V  D  T+ + I GLCK G + +AV++
Sbjct: 298 VVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV 357

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG--- 388
              +    C  ++  YN LI G  +  ++++A+ L   L    L P+  TYSI+I G   
Sbjct: 358 REMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSK 417

Query: 389 --------------------------------LCNDGQMDKARDLFLDMEENAVVPNVIT 416
                                           +C  G M++A  LF +M++N  + + I 
Sbjct: 418 MWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL-DAIA 476

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  +I G  +  +   V +L+  M +  + PDA   S+++++ AK
Sbjct: 477 YSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAK 521



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 172/350 (49%), Gaps = 5/350 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   +++    P+ VT+  LI  LC E  + EA  L  ++   G  PDV TY
Sbjct: 242 GKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTY 301

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GL        A++  EEM  G+     V EP+ VT+ ++I GLCK G + +A ++
Sbjct: 302 NTLIAGLSGVLEMDEAMSFLEEMIQGD----TVVEPDVVTFNSVIHGLCKIGRMTQAVKV 357

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M ++    N+VTY  +I GF        A  L  E+   G++P+  T++++++   K
Sbjct: 358 REMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSK 417

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++D A + L  M Q G++ + F Y  LL   C  G +  A  LF  M+   C     +
Sbjct: 418 MWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIA 476

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+G CK+ +++    L  +ML +G+ PD V ++ L     ++  +E A ++  +M 
Sbjct: 477 YSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMT 536

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            +G   D   + + I G    G   + ++L H +R     FD +  +++I
Sbjct: 537 ASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDV---VIHNTLFVGLFEI--HQVERAFKLF 297
           + L+N   +   +  A SL S +      PDV   V +NT+   L       + +A  L 
Sbjct: 55  AALLNRRLRGAPVTEACSLLSAL------PDVRDAVSYNTVLAALCRRGGDHLRQARSLL 108

Query: 298 DEMQRNGVAA---DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            +M R    A   +  +Y T + GLC +    EAV L  +++      D+  Y +LI GL
Sbjct: 109 VDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGL 168

Query: 355 CKSGRLEIALELFRSLPCGVLV-PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           C +  L+ ALEL   + CG  V PNVV YS ++ G C  G+      +F DM    + P+
Sbjct: 169 CDASELDAALELLDEM-CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPD 227

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           VI F  LI    +  +  K  ++   M +  + P+    +++++ L K
Sbjct: 228 VIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCK 275


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 244/493 (49%), Gaps = 40/493 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R        G++L++    D +    L+KG C   R  EA   L  +    GC PDVF+Y
Sbjct: 130 RPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 189

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+  LC    +  A +L   MA G    G VC P+ V YTT+ID   KEG V+KA +L
Sbjct: 190 SILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPDVVAYTTVIDCFFKEGDVNKACDL 245

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK--------------------------------- 148
             +M  + I P++VTY+SV+   C A+                                 
Sbjct: 246 FKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 305

Query: 149 --DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W EA R+F EM    + P+VVT N++M  LCK GK+ EA  + D M   G  PD F+
Sbjct: 306 TGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 365

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  +L+G+   G +    +LF  M   G    ++++S+LI  Y     ++ A+ +++EM 
Sbjct: 366 YKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMR 425

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G+KPDVV + T+   L  I +++ A + F++M   GVA D + Y   I G C +G ++
Sbjct: 426 DHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 485

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A EL   +       DI  ++S+I+ LCK GR+  A  +F         P+ V YS+++
Sbjct: 486 KAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLM 545

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G C  G+M+KA  +F  M    + PNV+ +  L+ G+ +I    + + L  +M +  + 
Sbjct: 546 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 605

Query: 447 PDASIVSIVVDLL 459
           P   + +I++D L
Sbjct: 606 PSTILYNIIIDGL 618



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/410 (34%), Positives = 213/410 (51%), Gaps = 31/410 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   + +    PD VT   L+  LC   +I EA  +F  + + G  PDVF+Y
Sbjct: 307 GQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 366

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGVV--------------------- 94
             ++NG       +   +LF+ M  G+G       F V+                     
Sbjct: 367 KIMLNGYATKGCLVDMTDLFDLML-GDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMR 425

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +P+ VTYTT+I  LC+ G +D A E   QM D+ + P+   Y  +I+GFC      
Sbjct: 426 DHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 485

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +AK L +E+M+ G++ ++V F+ I++ LCK G++ +A  + DL +  G  PDA  Y+ L+
Sbjct: 486 KAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLM 545

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+CL G++  A  +F +M S G +  V  Y  L+NGYCK   I+  LSL+ EML KGIK
Sbjct: 546 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 605

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P  +++N +  GLF   +   A   F EM  +G+A +  TY   + G  KN    EA+ L
Sbjct: 606 PSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFL 665

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           F  LR +  + DI   N++I G+ ++ R+E A +LF S+    LVP VVT
Sbjct: 666 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 225/447 (50%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    +   +++    PD VT++S++  LC    + +A A   ++   G  PD +TY
Sbjct: 237 GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTY 296

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G   T     A+ +F+EM   +        P+ VT   ++  LCK G + +A+++
Sbjct: 297 NNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  K   P+V +Y  ++ G+       +   LF  M+  G+ P++ TF+V++     
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D+A  + + M  HGV+PD  TY T++   C  G+++ A E F  M   G     ++
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 470

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LI G+C +  +  A  L  E+++ G++ D+V  +++   L ++ ++  A  +FD   
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTV 530

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D   Y   +DG C  G + +A+ +F  +     E ++  Y +L++G CK GR++
Sbjct: 531 NVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRID 590

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             L LFR +    + P+ + Y+I+I GL   G+   A+  F +M E+ +  N  T+++++
Sbjct: 591 EGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVL 650

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
           RGF +     + I L  +++ +NV  D
Sbjct: 651 RGFFKNRCFDEAIFLFKELRAMNVKID 677



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 214/427 (50%), Gaps = 6/427 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+ +LI G  +  +  EA  +F ++R     PDV T   L+  LC+      A ++
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+ MA   G+      P+  +Y  +++G   +G +    +L   M    I P++ T++ +
Sbjct: 351 FDTMAM-KGQ-----NPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVL 404

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I+ +      ++A  +F EM D GV+P+VVT+  ++  LC+ GKMD+A    + MI  GV
Sbjct: 405 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD + Y+ L+ GFC  G +  AKEL + + + G +  +  +S +IN  CK   I  A +
Sbjct: 465 APDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQN 524

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++   ++ G  PD V+++ L  G   + ++E+A ++FD M   G+  +   Y T ++G C
Sbjct: 525 IFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYC 584

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G I E + LF  +     +     YN +IDGL  +GR   A   F  +    +  N  
Sbjct: 585 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKC 644

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I++ G   +   D+A  LF ++    V  ++IT + +I G  +     +  +L   +
Sbjct: 645 TYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 704

Query: 441 KEINVMP 447
               ++P
Sbjct: 705 SRSGLVP 711



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 191/380 (50%), Gaps = 4/380 (1%)

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
           S   +A+ LF   A+   +   V  P + TY  ++D   +    + A     Q+    ++
Sbjct: 89  SGPALAVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 147

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASR 190
            +++    +++GFC AK  +EA  + +    + G  P+V ++++++  LC  GK  +A  
Sbjct: 148 VDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 207

Query: 191 LLDLMIQHGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           LL +M + G    PD   Y T++D F   G VN A +LF  M   G    + +YS +++ 
Sbjct: 208 LLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 267

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK + +  A +   +M++KG+ PD   +N L  G     Q + A ++F EM+R+ +  D
Sbjct: 268 LCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 327

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             T    +  LCK G I EA ++F T+ +     D+ +Y  +++G    G L    +LF 
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    + P++ T+S++I    N G +DKA  +F +M ++ V P+V+T+  +I    RI 
Sbjct: 388 LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIG 447

Query: 429 EPSKVIELLHKMKEINVMPD 448
           +    +E  ++M +  V PD
Sbjct: 448 KMDDAMEKFNQMIDQGVAPD 467



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 162/338 (47%), Gaps = 9/338 (2%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P   TY  ++     A     A   F +++  G++ +++  N ++   C+  + DEA 
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA- 169

Query: 190 RLLDLMIQH----GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYS 243
             LD+++      G  PD F+Y+ LL   C  G+   A +L   M   G  C   V +Y+
Sbjct: 170 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYT 227

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +I+ + K  ++  A  L+ EM+ +GI PD+V ++++   L +   + +A     +M   
Sbjct: 228 TVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNK 287

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           GV  D WTY   I G    G   EAV +F  +R      D+   N L+  LCK G+++ A
Sbjct: 288 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEA 347

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++F ++      P+V +Y IM+ G    G +    DLF  M  + + P++ TF +LI+ 
Sbjct: 348 RDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKA 407

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +       K + + ++M++  V PD    + V+  L +
Sbjct: 408 YANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCR 445



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 142/305 (46%), Gaps = 41/305 (13%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++        +++     PD   +  LI+G C    +++A  L  ++   G   D+  
Sbjct: 446 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVF 505

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +++++N LC+    + A N+F+   N      V   P+ V Y+ ++DG C  G ++KA  
Sbjct: 506 FSSIINNLCKLGRIMDAQNIFDLTVN------VGQHPDAVVYSMLMDGYCLVGKMEKALR 559

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    I+PNVV Y +++ G+C     +E   LF EM+ +G++P+ + +N+I+D L 
Sbjct: 560 VFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 619

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+   A      M + G+  +  TYN +L GF                          
Sbjct: 620 VAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGF-------------------------- 653

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
                     KN+  + A+ L+ E+ +  +K D++  NT+  G+F+  +VE A  LF  +
Sbjct: 654 ---------FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 704

Query: 301 QRNGV 305
            R+G+
Sbjct: 705 SRSGL 709



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 6/171 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V   ++ +   P+ V + +L+ G C   RI E  +LF ++   G +P    
Sbjct: 551 VGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 610

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GL     T+ A   F EM     E G+    N  TY  ++ G  K    D+A  
Sbjct: 611 YNIIIDGLFVAGRTVPAKVKFHEMT----ESGIAI--NKCTYNIVLRGFFKNRCFDEAIF 664

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
           L  +++  N+K +++T  ++I G    +   EAK LF  +   G+ P VVT
Sbjct: 665 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/452 (32%), Positives = 255/452 (56%), Gaps = 27/452 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++   F V+G+ILK    P+ VTFT+L+KG C   ++++A  ++ ++       D   
Sbjct: 102 MGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVL 161

Query: 61  YTTLVNGLCRTS--HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           Y TL+NGLC++       A+ L ++M     E   + +PN + Y T++ GLCK+G +++A
Sbjct: 162 YGTLINGLCKSKIGKPRAAVQLLQKM-----EERQLVKPNLIMYNTVVHGLCKDGNINEA 216

Query: 119 KELLLQMKDKNIKPNVVTY----------------TSVIRGFCYAKDWNEAKRLFIEMMD 162
           + L  +M  + I P++ TY                TS++ GFC     +EA+ LF  M++
Sbjct: 217 RVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIE 276

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
           +G Q +++ +N++M+  C N K+ EA +L  +M++ G +PD  TY  L+ G+CL  +V+ 
Sbjct: 277 RGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDE 336

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
           A+ LF  M   G    V+SY+ILI GYCK + +  A++L  +M  K + P+++ +N++  
Sbjct: 337 ARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVD 396

Query: 283 GLFEIHQVERAFKLFDEMQR-NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
           GL +   +  A+KL DEM        D  TY   ++ LC+   + +A+  F  L I +  
Sbjct: 397 GLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHL-IFERS 455

Query: 342 F--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           F  ++ +YN LI G CK+ RL+ A+ LF  +    LVP++VTY+I++  L N  Q+DKA 
Sbjct: 456 FAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAI 515

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
            L + + +  + PN+ T+++LI G  +   P 
Sbjct: 516 ALLVQIVDQGISPNLRTYNILINGLHKGGRPK 547



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 253/462 (54%), Gaps = 27/462 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VTF  LI   C   ++  A ++  K+  +GC P+V T+TTL+ G C     + AL +
Sbjct: 87  PFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYI 146

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE--GFVDKAKELLLQMKDKN-IKPNVVTY 137
           ++EM      F      + V Y T+I+GLCK   G    A +LL +M+++  +KPN++ Y
Sbjct: 147 YDEMVARRIRF------DDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMY 200

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK---------------- 181
            +V+ G C   + NEA+ L  +M+ QG+ P++ T++ ++  LC+                
Sbjct: 201 NTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCL 260

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N K+DEA  L ++MI+ G + D   YN L++G+CL  +V  A++LF  M   G +    +
Sbjct: 261 NNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTIT 320

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+IL++GYC   +++ A +L+  M+ +G+ PDV  +N L  G  +  +V  A  L ++M 
Sbjct: 321 YTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMF 380

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL-KCEFDIRAYNSLIDGLCKSGRL 360
              +  +  TY + +DGLCK+G I++A +L   +    +   D+  YN L++ LC+   +
Sbjct: 381 LKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECV 440

Query: 361 EIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           E A+  F+ L       PNV +Y+I+I G C + ++D+A +LF  M    +VP+++T+++
Sbjct: 441 EKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNI 500

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           L+       +  K I LL ++ +  + P+    +I+++ L K
Sbjct: 501 LLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHK 542



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 234/460 (50%), Gaps = 27/460 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  V FT ++  +        A  L+T +   G  P   T+  L+N  C       A ++
Sbjct: 52  PSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSV 111

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             ++     ++G  C PN VT+TT++ G C    +  A  +  +M  + I+ + V Y ++
Sbjct: 112 MGKIL----KWG--CRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTL 165

Query: 141 IRGFCYAK--DWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           I G C +K      A +L  +M + Q V+PN++ +N ++  LCK+G ++EA  L   MI 
Sbjct: 166 INGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIV 225

Query: 198 HGVRPDAFTYN----------------TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ PD FTY+                +LL+GFCL  +V+ A+ELF  M   G +H + +
Sbjct: 226 QGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIIN 285

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+IL+NGYC N ++  A  L+  M+ +G +PD + +  L  G   I +V+ A  LF  M 
Sbjct: 286 YNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMI 345

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D W+Y   I G CK   + EA+ L   + +     +I  YNS++DGLCKSG + 
Sbjct: 346 ERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGIL 405

Query: 362 IALELFRSLP-CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDM 419
            A +L   +  C    P+V TY+I++  LC    ++KA   F  +  E +  PNV ++++
Sbjct: 406 DAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNI 465

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           LI G  +     + I L + M   N++PD    +I++D L
Sbjct: 466 LISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDAL 505



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 194/385 (50%), Gaps = 49/385 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ + + +++ GLC +  I EA  L +K+ V G  PD+FTY++L+ GLCR        +L
Sbjct: 195 PNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSL 254

Query: 81  FEEMANGNGE------FGVVCE----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                  N        F V+ E     + + Y  +++G C    V +A++L   M ++  
Sbjct: 255 LNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGE 314

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +P+ +TYT ++ G+C     +EA+ LF  M+++G+ P+V ++N+++   CK  ++ EA  
Sbjct: 315 QPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMN 374

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME------------------- 231
           LL+ M    + P+  TYN+++DG C +G +  A +L   M                    
Sbjct: 375 LLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESL 434

Query: 232 -SMGC--------KHTVF---------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
             + C        KH +F         SY+ILI+G CKN+ ++ A++L++ M  K + PD
Sbjct: 435 CRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPD 494

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           +V +N L   LF   Q+++A  L  ++   G++ +  TY   I+GL K G    A ++  
Sbjct: 495 IVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISL 554

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSG 358
            L I     D++ Y  +I+ LCK G
Sbjct: 555 YLSIRGYHPDVKTY--IINELCKGG 577



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 198/372 (53%), Gaps = 19/372 (5%)

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           CK   +D A  L  +M D +  P++V +T ++      + +  A  L+  M  +GV P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           VTFN++++  C  G+MD A  ++  +++ G RP+  T+ TL+ GFC+  ++  A  ++  
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 230 MESMGCKHTVFSYSILINGYCKNK--EIEGALSLYSEMLSKG-IKPDVVIHNTLFVGLFE 286
           M +   +     Y  LING CK+K  +   A+ L  +M  +  +KP+++++NT+  GL +
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK-----------NGYIV-----EAVE 330
              +  A  L  +M   G+  D +TY + I GLC+           NG+ +     EA E
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           LF+ +     + DI  YN L++G C + ++  A +LF  +      P+ +TY+I++ G C
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
              ++D+AR+LF  M E  +VP+V ++++LI+G+ +     + + LL  M   N++P+  
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 451 IVSIVVDLLAKN 462
             + VVD L K+
Sbjct: 390 TYNSVVDGLCKS 401



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP--DVFT 60
           RV     +L  +      P+ +T+ S++ GLC    I++A  L  ++  + C+P  DV T
Sbjct: 368 RVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMH-YCCQPPPDVTT 426

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+  LCR      A+  F+ +      F     PN  +Y  +I G CK   +D+A  
Sbjct: 427 YNILLESLCRIECVEKAIAFFKHLI-----FERSFAPNVWSYNILISGCCKNRRLDEAIN 481

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M  KN+ P++VTY  ++      +  ++A  L ++++DQG+ PN+ T+N++++ L 
Sbjct: 482 LFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLH 541

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTY 207
           K G+   A ++   +   G  PD  TY
Sbjct: 542 KGGRPKTAQKISLYLSIRGYHPDVKTY 568



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 71/146 (48%)

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   I +AV LFH +  +     I  +  ++  + K      A++L+  +    +VP  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++I+I   C+ GQMD A  +   + +    PNV+TF  L++GF   ++    + +  +
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 440 MKEINVMPDASIVSIVVDLLAKNEIS 465
           M    +  D  +   +++ L K++I 
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIG 175



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 55/115 (47%)

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK   ++ A+ LF  +     +P++V ++ ++G +        A DL+  ME   VVP  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           +TF++LI  F  + +      ++ K+ +    P+    + ++     N+  L++L
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDAL 144


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 160/489 (32%), Positives = 253/489 (51%), Gaps = 31/489 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   + +    PD VT + L+  LC   +I EA  +F  + + G  P+VF+Y
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSY 362

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGVV--------------------- 94
           T ++NG       +   +LF+ M  G+G       F V+                     
Sbjct: 363 TIMLNGYATKGCLVDMTDLFDLML-GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 421

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +P+ VTY T+I  LC+ G +D A E   QM D+ + P+   Y  +I+GFC      
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +AK L  E+M+ G+  ++V F+ I++ LCK G++ +A  + DL +  G+ P A  Y+ L+
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG+CL G++  A  +F +M S G +     Y  L+NGYCK   I+  LSL+ EML KGIK
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P  +++N +  GLFE  +   A   F EM  +G+A +  TY   + GL KN    EA+ L
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFL 661

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  LR +  + +I   N++I G+ ++ R+E A +LF S+    LVP VVTYSIMI  L  
Sbjct: 662 FKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G +++A D+F  M+     P+    + ++R  ++ NE  +    L K+ E N   +   
Sbjct: 722 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 781

Query: 452 VSIVVDLLA 460
             ++VDL +
Sbjct: 782 TMLLVDLFS 790



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 243/493 (49%), Gaps = 40/493 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R        G++L++    + +    L+KG C   R  EA   L  +    GC PDVF+Y
Sbjct: 126 RPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 185

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+  LC    +  A +L   MA G    G VC P+ V Y+T+IDG  KEG V+KA +L
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPDVVAYSTVIDGFFKEGDVNKACDL 241

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK--------------------------------- 148
             +M  + I P+ VTY+SV+   C A+                                 
Sbjct: 242 FKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSS 301

Query: 149 --DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W EA R+F EM    + P+VVT +++M  LCK GK+ EA  + D M   G  P+ F+
Sbjct: 302 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFS 361

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  +L+G+   G +    +LF  M   G    ++++++LI  Y     ++ A+ +++EM 
Sbjct: 362 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 421

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G+KPDVV + T+   L  I +++ A + F++M   GVA D + Y   I G C +G ++
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A EL   +       DI  ++S+I+ LCK GR+  A  +F       L P  V YS+++
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G C  G+M+KA  +F  M    + PN + +  L+ G+ +I    + + L  +M +  + 
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 447 PDASIVSIVVDLL 459
           P   + +I++D L
Sbjct: 602 PSTILYNIIIDGL 614



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 195/383 (50%), Gaps = 5/383 (1%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR+   + A+ LF   A+   +   V  P + TY  ++D   +    + A     Q+   
Sbjct: 83  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 140

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDE 187
            ++ N++    +++GFC AK  +EA  + +    + G  P+V ++++++  LC  GK  +
Sbjct: 141 GLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200

Query: 188 ASRLLDLMIQHGV--RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           A  LL +M + G    PD   Y+T++DGF   G VN A +LF  M   G      +YS +
Sbjct: 201 ADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++  CK + ++ A +   +M++KG+ P+   +N L  G     Q + A ++F EM+R+ +
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D  T    +  LCK G I EA ++F T+ +     ++ +Y  +++G    G L    +
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTD 380

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           LF  +    + P++ T++++I    N G +DKA  +F +M ++ V P+V+T+  +I    
Sbjct: 381 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440

Query: 426 RINEPSKVIELLHKMKEINVMPD 448
           RI +    +E  ++M +  V PD
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPD 463



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 164/338 (48%), Gaps = 9/338 (2%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P   TY  ++     A     A   F +++  G++ N++  N ++   C+  + DEA 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEA- 165

Query: 190 RLLDLMIQH----GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYS 243
             LD+++      G  PD F+Y+ LL   C  G+   A +L   M   G  C   V +YS
Sbjct: 166 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYS 223

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +I+G+ K  ++  A  L+ EM+ +GI PD V ++++   L +   +++A     +M   
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           GV  + WTY   I G    G   EAV +F  +R      D+   + L+  LCK G+++ A
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++F ++      PNV +Y+IM+ G    G +    DLF  M  + + P++ TF++LI+ 
Sbjct: 344 RDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 403

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +       K + + ++M++  V PD      V+  L +
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 155/336 (46%), Gaps = 11/336 (3%)

Query: 2   GRVSHGFVV-----LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG ++     +  I+ +    D V F+S+I  LC   R+M+A  +F      G  P
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
               Y+ L++G C       AL +F+ M +         EPN V Y T+++G CK G +D
Sbjct: 533 TAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG------IEPNDVVYGTLVNGYCKIGRID 586

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +   L  +M  K IKP+ + Y  +I G   A     AK  F EM + G+  N  T+N+++
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVL 646

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L KN   DEA  L   +    V+ +  T NT++ G   T RV  AK+LF S+   G  
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 706

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +YSI+I    K   +E A  ++S M + G +PD  + N +   L + +++ RA   
Sbjct: 707 PCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 766

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
             ++     + +  T    +D     G   E +   
Sbjct: 767 LSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 156/328 (47%), Gaps = 6/328 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++        +++     PD   +  LI+G C    +++A  L +++   G   D+  
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +++++N LC+    + A N+F+   N      V   P  V Y+ ++DG C  G ++KA  
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPTAVVYSMLMDGYCLVGKMEKALR 555

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    I+PN V Y +++ G+C     +E   LF EM+ +G++P+ + +N+I+D L 
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 615

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+   A      M + G+  +  TYN +L G       + A  LF  + +M  K  + 
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 675

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + + +I G  + + +E A  L++ +   G+ P VV ++ +   L +   VE A  +F  M
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM 735

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           Q  G   D+      +  L K   IV A
Sbjct: 736 QNAGCEPDSRLLNHVVRELLKKNEIVRA 763


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 162/519 (31%), Positives = 254/519 (48%), Gaps = 49/519 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V    ++L +I +   +PD  T+TSLI G C    +  A  +F ++   GC+P+  TY
Sbjct: 254 GKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTY 313

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NGLC       AL++ EEM     E G+  EP   TYT  I  LC     ++A EL
Sbjct: 314 STLINGLCNEGRVDEALDMLEEMI----EKGI--EPTVYTYTLPITALCAIEHEEEAIEL 367

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +MK +  +PNV TYT++I G         A  L+ +M+ +G+ PN VT+N +++ELC 
Sbjct: 368 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 427

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+   A ++   M  HG   +  TYN ++ G CL G +  A  LF  M  MG   TV +
Sbjct: 428 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 487

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LINGY     +  A  L   M   G +PD   +N L  G  +  ++E A   F EM 
Sbjct: 488 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN------------- 348
             G+  +  +Y T IDG  K+G +  A+ L   +  + C  ++ +YN             
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607

Query: 349 ----------------------SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
                                 +LIDGLC++GR + A ++F  +     +PN+ TYS +I
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 667

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC +G+ D+A  L  +ME   + P+ +TF  LI GF+ +        LL +M ++   
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCK 727

Query: 447 PDASIVSIVVDLLAKN--------EISLNSLPSFTVHEQ 477
           P+    S+++  L K          +   ++ SF+ HE+
Sbjct: 728 PNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEK 766



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 241/493 (48%), Gaps = 30/493 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    V+  ++LK    P  VT+ +LI G   +  +  AA L   ++  GCEPD +TY
Sbjct: 464 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 523

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+G  +      A   F+EM     E G+   PN V+YTT+IDG  K+G VD A  L
Sbjct: 524 NELVSGFSKWGKLESASFYFQEMV----ECGL--NPNPVSYTTLIDGHSKDGKVDIALSL 577

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M++    PNV +Y +VI G      ++EA+++  +M +QG+ PNV+T+  ++D LC+
Sbjct: 578 LERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCR 637

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG+   A ++   M +    P+ +TY++L+ G C  G+ + A+ L   ME  G      +
Sbjct: 638 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVT 697

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL----------------- 284
           ++ LI+G+     I+ A  L   M+  G KP+   ++ L  GL                 
Sbjct: 698 FTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEA 757

Query: 285 ---FEIHQVERAFK----LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
              F  H+ +  F+    L   M   G      TY T + GLC+ G   EA +L   ++ 
Sbjct: 758 VYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKE 817

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                D   Y SL+   CK+  ++ AL++F S+       ++  Y  +I  LC  GQ+++
Sbjct: 818 RGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEE 877

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A+ LF +M E     + I + +L+ G ++  E    ++LLH M+  N  P+     I+  
Sbjct: 878 AQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGR 937

Query: 458 LLAKNEISLNSLP 470
            L++   S+ S P
Sbjct: 938 ELSRIGKSIESEP 950



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 216/466 (46%), Gaps = 30/466 (6%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++ R+ K    P+  T+T+LI GL    ++  A  L+ K+   G  P+  TY  L+N LC
Sbjct: 367 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 426

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  AL +F  M  G+G        NT TY  II GLC  G ++KA  L  +M    
Sbjct: 427 VGGRFSTALKIFHWM-EGHGSLA-----NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 480

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P VVTY ++I G+    + N A RL   M + G +P+  T+N ++    K GK++ AS
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 540

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
                M++ G+ P+  +Y TL+DG    G+V+ A  L   ME MGC   V SY+ +ING 
Sbjct: 541 FYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K      A  +  +M  +G+ P+V+ + TL  GL    + + AFK+F +M++     + 
Sbjct: 601 SKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 660

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +TY + I GLC+ G   EA  L   +       D   + SLIDG    GR++ A  L R 
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 720

Query: 370 LPCGVLVPNVVTYSIMIGGL---C---------------------NDGQMDKARDLFLDM 405
           +      PN  TYS+++ GL   C                      D   +   +L   M
Sbjct: 721 MVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARM 780

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            E    P + T+  L+ G  R     +  +L+  MKE    PD  I
Sbjct: 781 SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 186/359 (51%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           T++  L K   V+ A+ L  QM +  I+P+++T+ ++I          EA+ +  ++   
Sbjct: 210 TLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQY 269

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
            + P+V T+  ++   C+N  +D A  + D M++ G  P++ TY+TL++G C  GRV+ A
Sbjct: 270 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 329

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            ++   M   G + TV++Y++ I   C  +  E A+ L + M  +G +P+V  +  L  G
Sbjct: 330 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 389

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L  + ++E A  L+ +M + G+  +T TY   I+ LC  G    A+++FH +       +
Sbjct: 390 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 449

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
            + YN +I GLC  G +E A+ LF  +     +P VVTY+ +I G    G ++ A  L  
Sbjct: 450 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 509

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            M+EN   P+  T++ L+ GF +  +         +M E  + P+    + ++D  +K+
Sbjct: 510 LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKD 568



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 177/397 (44%), Gaps = 65/397 (16%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L R+ +    P+  ++ ++I GL  E+R  EA  +  K+   G  P+V TY
Sbjct: 569 GKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITY 628

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++GLCR   T  A  +F +M          C PN  TY+++I GLC+EG  D+A+ L
Sbjct: 629 TTLIDGLCRNGRTQFAFKIFHDMEKRK------CLPNLYTYSSLIYGLCQEGKADEAEIL 682

Query: 122 LLQMKDKNI-----------------------------------KPNVVTYTSVIRGF-- 144
           L +M+ K +                                   KPN  TY+ +++G   
Sbjct: 683 LKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQK 742

Query: 145 -C-------------------YAKDWNE--AKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            C                   + KD N      L   M + G +P + T++ ++  LC+ 
Sbjct: 743 ECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRK 802

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+  EA +L+  M + G  PD   Y +LL   C    V+HA ++F S+E+ G +  +  Y
Sbjct: 803 GRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIY 862

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
             LI   CK  ++E A +L+  ML K    D ++   L  GL +  +++   KL   M+ 
Sbjct: 863 RALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMES 922

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
                +  TY      L + G  +E+  L   L++LK
Sbjct: 923 KNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLK 959



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 151/289 (52%)

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           E+   G   ++ + N ++ +L K   ++ A  L   M+  G++P   T+NTL++     G
Sbjct: 195 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 254

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           +V  A+ +   +        VF+Y+ LI G+C+N+ ++ A  ++  M+ +G  P+ V ++
Sbjct: 255 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 314

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           TL  GL    +V+ A  + +EM   G+    +TY   I  LC   +  EA+EL   ++  
Sbjct: 315 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 374

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            C  +++ Y +LI GL + G+LE+A+ L+  +    LVPN VTY+ +I  LC  G+   A
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 434

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
             +F  ME +  + N  T++ +I+G     +  K + L  KM ++  +P
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLP 483



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 123/230 (53%)

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           +  MG   +++S + L+    K + +EGA +LY +ML+ GI+P ++  NTL   L +  +
Sbjct: 196 ISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 255

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V  A  +  ++ +  ++ D +TY + I G C+N  +  A  +F  +    C+ +   Y++
Sbjct: 256 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 315

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+GLC  GR++ AL++   +    + P V TY++ I  LC     ++A +L   M++  
Sbjct: 316 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 375

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             PNV T+  LI G  R+ +    I L HKM +  ++P+    + +++ L
Sbjct: 376 CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 425



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 40/243 (16%)

Query: 222 HAKELFVSMESMGCKHTVFSYS----ILINGYCKNKE-IEGALSLYSEMLSKGIKPDVVI 276
           H    F+SM +   +  VF+ +    IL+   C+N+E I       +E+   G    +  
Sbjct: 148 HNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYS 207

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            NTL + L +   VE A  L+ +M  +G+     T+                        
Sbjct: 208 CNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF------------------------ 243

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                      N+LI+ L K G++  A  +   +    L P+V TY+ +I G C +  +D
Sbjct: 244 -----------NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 292

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  +F  M +    PN +T+  LI G        + +++L +M E  + P     ++ +
Sbjct: 293 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 352

Query: 457 DLL 459
             L
Sbjct: 353 TAL 355


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 150/457 (32%), Positives = 235/457 (51%), Gaps = 8/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           + S  F VLG I+K  F  +   F  L+KG C      +A  LF  ++     PD  +Y 
Sbjct: 109 KPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYN 168

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T++NGLC+    + A  LF+EM  G       C+PN+VT++ +IDG CK G V++   LL
Sbjct: 169 TVINGLCKGKRLVEAKELFKEMKGGE------CKPNSVTFSALIDGFCKNGDVEEGFGLL 222

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+   ++ +V  Y+++I GFC   D    K LF EM+ + V PNVVT++ +M+ LCK 
Sbjct: 223 EEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKK 282

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K  EA+++LD M    VRPD   Y  L DG    GR + A ++   M   G +    +Y
Sbjct: 283 QKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTY 342

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + +ING CK   ++ AL +   M  KG KPDVV ++TL  GL  + +++ A  L + +  
Sbjct: 343 NAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMS 402

Query: 303 N--GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +  D + +   I  LCK   +  A  +++T+       +I  YN LIDG   +G+L
Sbjct: 403 KEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKL 462

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             ALEL++      + PN  TY+++I GLC    +  A+ LF     +   P V  ++ L
Sbjct: 463 TKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTL 522

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +    R +   +   L  +M+  N  PD    +I++D
Sbjct: 523 MASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIID 559



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 262/535 (48%), Gaps = 81/535 (15%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           ++C  PD V++ ++I GLC   R++EA  LF +++   C+P+  T++ L++G C+     
Sbjct: 157 RNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVE 216

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
               L EEM     + G+  E +   Y+ +I G C +G +++ KEL  +M  KN+ PNVV
Sbjct: 217 EGFGLLEEME----KMGL--EGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVV 270

Query: 136 TYTSVIRGFCYAKDWNEAKRLF-------------------------------IEMMD-- 162
           TY+ ++   C  + W EA ++                                I+++D  
Sbjct: 271 TYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLM 330

Query: 163 --QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG-- 218
             +G +PN VT+N I++ LCK G++D+A  +L+ M + G +PD  TY+TL+ G C  G  
Sbjct: 331 VKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKI 390

Query: 219 -----------------------------------RVNHAKELFVSMESMGCKHTVFSYS 243
                                              R+ HAK ++ +M   G    + +Y+
Sbjct: 391 DEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYN 450

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           ILI+GY    ++  AL L+ + +  GI P+   +  L  GL ++  +  A  LF++ + +
Sbjct: 451 ILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRAS 510

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G       Y T +  LC+   + +A  LF  +R    + D+ ++N +IDG  K+G +E A
Sbjct: 511 GTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            EL   +    LVP+ +T+SI+I      GQ+D+A  L+  M     VP+ + FD L++G
Sbjct: 571 KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKG 630

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA--KNEISLNS-LPSFTVH 475
           +    +  KV+ +L +M + +V+ D+ + S ++  L     ++ +   LP F+ H
Sbjct: 631 YSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQH 685



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 196/369 (53%), Gaps = 2/369 (0%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N   +  ++ G C+ G   KA +L   MK   + P+ V+Y +VI G C  K   EAK LF
Sbjct: 128 NVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELF 187

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM     +PN VTF+ ++D  CKNG ++E   LL+ M + G+  D F Y+ L+ GFC  
Sbjct: 188 KEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSK 247

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G +   KELF  M        V +YS L+N  CK ++ + A  +   M    ++PDVV +
Sbjct: 248 GDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAY 307

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             L  GL +  +   A K+ D M + G   +  TY   I+GLCK G + +A+ +  T+  
Sbjct: 308 TVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAK 367

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV--LVPNVVTYSIMIGGLCNDGQM 395
              + D+  Y++L+ GLC  G+++ A++L   L      + P+V  ++++I  LC   ++
Sbjct: 368 KGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRL 427

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
             A+ ++  M E     N++T+++LI G++   + +K +EL     +  + P+A+  +++
Sbjct: 428 RHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVL 487

Query: 456 VDLLAKNEI 464
           ++ L K ++
Sbjct: 488 INGLCKMQM 496



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 173/372 (46%), Gaps = 37/372 (9%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N  P+  +  ++I     AK ++    +  +M    V P   + + +++      K   A
Sbjct: 54  NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFA 113

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTG------------------------------ 218
             +L L+++ G   + + +N LL GFC +G                              
Sbjct: 114 FGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVING 173

Query: 219 -----RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
                R+  AKELF  M+   CK    ++S LI+G+CKN ++E    L  EM   G++ D
Sbjct: 174 LCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD 233

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           V +++ L  G      +ER  +LF+EM R  V  +  TY   ++ LCK     EA ++  
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
           T+   K   D+ AY  L DGL K+GR   A+++   +      PN VTY+ +I GLC +G
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEG 353

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM--KEINVMPDASI 451
           ++D A  +   M +    P+V+T+  L++G   + +  + ++LL+ +  KE ++ PD   
Sbjct: 354 RVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFA 413

Query: 452 VSIVVDLLAKNE 463
            ++V+  L K  
Sbjct: 414 FNLVIQELCKQR 425


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 146/431 (33%), Positives = 239/431 (55%), Gaps = 30/431 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++++ F VL +ILK  + PD VT T+L+KGLC  + + +A      +   G   D  +Y 
Sbjct: 25  QLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYG 84

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NGLC++  T                      P+   Y+ II+ LCK+  V  A +L 
Sbjct: 85  TLINGLCKSGETKA--------------------PDQFMYSMIINRLCKDKLVVDAYDLY 124

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  K I P+VVTY ++I GFC      +A RLF EM  + + PNV +FN+++D LCK 
Sbjct: 125 CEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKE 184

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +     +L +MI+  V+PD  T ++L+DG+ L  + N A+ +F +M   G    + SY
Sbjct: 185 GDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSY 244

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +I+ING  K K ++ A+ L+ EM  K + PD + ++TL  GL ++ ++   + L DEM+ 
Sbjct: 245 NIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRA 304

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G +A+  TY + ++ LCK+G+   A+ +F  ++    E ++  YN L+DGLCK+GRL+ 
Sbjct: 305 TGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKD 364

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A E+F  L       +V  Y++MI GLC +   D+A             PN +T++++IR
Sbjct: 365 AQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAY---------GCTPNAVTYEIIIR 415

Query: 423 GFIRINEPSKV 433
              + N+ +K+
Sbjct: 416 ALFK-NDKNKL 425



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 198/396 (50%), Gaps = 21/396 (5%)

Query: 76  VALNLFEEMANGNGEFGVVC-------EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           + +N F  +   N  F V+        +P+TVT TT++ GLC    V KA      +  K
Sbjct: 15  ILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAK 74

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             + + V+Y ++I G C +    E K            P+   +++I++ LCK+  + +A
Sbjct: 75  GFRLDNVSYGTLINGLCKS---GETK-----------APDQFMYSMIINRLCKDKLVVDA 120

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L   M+   + PD  TYNTL+ GFC+ G++  A  LF  M        V S++ILI+G
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDG 180

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK  +++G  S+ + M+ + +KPDVV  ++L  G F + +  +A  +F+ M +NGV  D
Sbjct: 181 LCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTID 240

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             +Y   I+GL K   + EAV LF  ++      D   Y++LIDGL K GR+    +L  
Sbjct: 241 LRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLID 300

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +       NV+TYS ++  LC  G  D A  +F  +++    PN++T+++L+ G  +  
Sbjct: 301 EMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNG 360

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
                 E+ H +       D  + +++++ L +  +
Sbjct: 361 RLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREAL 396



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 177/373 (47%), Gaps = 49/373 (13%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M+ + I+ +++  + +I  F +    N A  +  +++  G QP+ VT   ++  LC N +
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           + +A    D +I  G R D  +Y TL++G C +G      +              F YS+
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQ--------------FMYSM 106

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +IN  CK+K +  A  LY EM+ K I PDVV +NTL  G   + Q+E A +LF+EM+   
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 305 VAADTWTYRTFIDGLCKNGYI-----VEAVELFHTLR--ILKCE---------------- 341
           +  +  ++   IDGLCK G +     V AV +  +++  ++ C                 
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226

Query: 342 ------------FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
                        D+R+YN +I+GL K+  ++ A+ LF+ +    + P+ +TYS +I GL
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGL 286

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
              G++    DL  +M       NVIT+  L+    +       I +  K+K+    P+ 
Sbjct: 287 GKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNM 346

Query: 450 SIVSIVVDLLAKN 462
              +I+VD L KN
Sbjct: 347 VTYNILVDGLCKN 359



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 134/253 (52%), Gaps = 15/253 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G  VL  ++K    PD VT +SLI G     +  +A  +F  +   G   D+ +Y
Sbjct: 185 GDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSY 244

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NGL +      A+ LF+EM     +F  +  P+T+TY+T+IDGL K G +    +L
Sbjct: 245 NIMINGLSKAKMVDEAVILFKEM-----QFKSM-TPDTITYSTLIDGLGKLGRISYVWDL 298

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+      NV+TY+S++   C +  ++ A R+F ++ D+G +PN+VT+N+++D LCK
Sbjct: 299 IDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCK 358

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++ +A  +   ++  G R D   Y  +++G C     +         E+ GC     +
Sbjct: 359 NGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFD---------EAYGCTPNAVT 409

Query: 242 YSILINGYCKNKE 254
           Y I+I    KN +
Sbjct: 410 YEIIIRALFKNDK 422



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 16/152 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+S+ + ++  +  +  + + +T++SL+  LC       A  +FTK++  G EP++ T
Sbjct: 289 LGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVT 348

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  LV+GLC+      A  +F ++        V        YT +I+GLC+E   D+A  
Sbjct: 349 YNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDV------RLYTVMINGLCREALFDEA-- 400

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                      PN VTY  +IR   +  D N+
Sbjct: 401 -------YGCTPNAVTYEIIIRAL-FKNDKNK 424


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 238/429 (55%), Gaps = 6/429 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P   T+  +I  +C E  ++ A +LF +++  G  PD+ TY TL++G  +      ++ 
Sbjct: 129 APTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVC 188

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LFEEM        + CEP+ +TY  +I+  CK   + +A E   +MKDK++KPNV++Y++
Sbjct: 189 LFEEMKF------MGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYST 242

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C       A + F++M   G+ PN  T++ ++D  CK G + EA  L D M+Q  
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V  +  TY TLLDG C  G +N A+ELF +M   G    + +Y+ LI+G+ K + ++ A+
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L++EM  K IKPD+++  T+  GL    ++E    +  EM+ +G+ A+   Y T +D  
Sbjct: 363 ELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAY 422

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K G   EA+ L   +R L  E  +  + +LIDGLCK G ++ A+  F  +P   L PNV
Sbjct: 423 FKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNV 482

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             Y+ +I GLC +  +  A+ LF +M++  ++P+ I +  +I G ++     + + + +K
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542

Query: 440 MKEINVMPD 448
           M E+ +  D
Sbjct: 543 MMEMGIELD 551



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 217/438 (49%), Gaps = 6/438 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K   TPD VT+ +LI G      + E+  LF +++  GCEPDV TY  L+N  C+    +
Sbjct: 160 KMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGML 219

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A   F EM + +       +PN ++Y+T+ID LCKEG +  A +  + M    + PN  
Sbjct: 220 RAFEFFREMKDKD------LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEF 273

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY+S+I   C A +  EA  L  EM+ + V  N+VT+  ++D LC+ G M+EA  L   M
Sbjct: 274 TYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAM 333

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            + GV P+   Y  L+ G      ++ A ELF  M     K  +  +  ++ G C   ++
Sbjct: 334 GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKL 393

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E    + +EM   GI  + VI+ TL    F+      A  L +EM+  G      T+   
Sbjct: 394 EECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCAL 453

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           IDGLCK G + EA+  F  +     + ++  Y +LIDGLCK+  +  A +LF  +    +
Sbjct: 454 IDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNM 513

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           +P+ + Y+ MI G    G   +A ++   M E  +  ++  +  L+ G  +  +  +  +
Sbjct: 514 IPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARK 573

Query: 436 LLHKMKEINVMPDASIVS 453
            L +M    ++PD ++ +
Sbjct: 574 FLAEMIGKGIIPDETLCT 591



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 193/364 (53%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           VC P    +  +   L + G ++ A +  L+M    + P   +  + +     A + + +
Sbjct: 57  VCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLS 116

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           +  F +M+  G+ P V T+N+++  +CK G M  A  L + M + G+ PD  TYNTL+DG
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +   G ++ +  LF  M+ MGC+  V +Y+ LIN +CK K +  A   + EM  K +KP+
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           V+ ++TL   L +   ++ A K F +M R G+  + +TY + ID  CK G + EA  L  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +     + +I  Y +L+DGLC+ G +  A ELFR++    + PN+  Y+ +I G     
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            MDKA +LF +M E  + P+++ +  ++ G    ++  +   ++ +MKE  +  +  I +
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYT 416

Query: 454 IVVD 457
            ++D
Sbjct: 417 TLMD 420



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 170/334 (50%), Gaps = 6/334 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F++   +L+     + VT+T+L+ GLC E  + EA  LF  +   G  P++  Y
Sbjct: 286 GNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAY 345

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++G  +      A+ LF EM   +       +P+ + + TI+ GLC E  +++ K +
Sbjct: 346 TALIHGHIKVRSMDKAMELFNEMREKD------IKPDILLWGTIVWGLCSESKLEECKII 399

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +MK+  I  N V YT+++  +  A +  EA  L  EM D G +  VVTF  ++D LCK
Sbjct: 400 MTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCK 459

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + EA      M  H ++P+   Y  L+DG C    +  AK+LF  M+         +
Sbjct: 460 RGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIA 519

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K+   + AL++ ++M+  GI+ D+  + +L  GL +  QV++A K   EM 
Sbjct: 520 YTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMI 579

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             G+  D       +    + G I EA+EL + L
Sbjct: 580 GKGIIPDETLCTRLLRKHYELGNIDEAIELQNEL 613



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 29/246 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD + + +++ GLC+ES++ E   + T+++  G   +   YTTL++   +  +   A+NL
Sbjct: 375 PDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINL 434

Query: 81  FEEMANGNGEFGVVC-----------------------------EPNTVTYTTIIDGLCK 111
            EEM +   E  VV                              +PN   YT +IDGLCK
Sbjct: 435 LEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCK 494

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
              +  AK+L  +M+DKN+ P+ + YT++I G     ++ EA  +  +MM+ G++ ++  
Sbjct: 495 NNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYA 554

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  ++  L + G++ +A + L  MI  G+ PD      LL      G ++ A EL   + 
Sbjct: 555 YTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELV 614

Query: 232 SMGCKH 237
             G  H
Sbjct: 615 EKGLIH 620



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 35/249 (14%)

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEML--SKGIKPDVVIHNTLFVG--LFEIH 288
           +G +HT  SY IL++           +  Y+ M   +  I  ++V+ + +  G  +FEI 
Sbjct: 3   VGFRHTTESYCILVH-----------ILFYARMYFHANNILKELVLSSWVLPGSDVFEIL 51

Query: 289 QVER-----AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
              R      F +FD +                  L + G +  A + F  +   +    
Sbjct: 52  WTTRNVCVPGFGVFDAL---------------FSVLVELGMLEAAGQCFLRMTKFRVLPK 96

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
            R+ N+ +  L K+G  +++ + FR +    + P V TY+IMIG +C +G M  AR LF 
Sbjct: 97  ARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFE 156

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            M++  + P+++T++ LI G+ +I    + + L  +MK +   PD    + +++   K +
Sbjct: 157 QMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFK 216

Query: 464 ISLNSLPSF 472
             L +   F
Sbjct: 217 GMLRAFEFF 225


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 251/464 (54%), Gaps = 7/464 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  S    V  R+      PD  T T  +K  C   R   A  L   +   GCE +  +Y
Sbjct: 125 GYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY 184

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G  + +  I A +LF+EM         +C P+ +T+  +I  LCK+G V ++++L
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQG-----IC-PDILTFNKLIHVLCKKGNVQESEKL 238

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++  + + PN+ T+   I+G C     +EA RL   ++ +G+ P+V+++N ++   CK
Sbjct: 239 FSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + K+ EA   L  M+  GV P+ FTYNT+++GFC  G + +A ++       G     F+
Sbjct: 299 HSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFT 358

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LING C + ++  A++++ E + KG K  ++++NTL  GL +   V +A +L  +M 
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G + D WTY   ++GLCK G + +A  + +      C  DI  +N+LIDG CK   ++
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+E+  ++    + P+V+TY+ ++ GLC   ++D   D F  M E    PN+IT+++LI
Sbjct: 479 KAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVDLLAKNEI 464
             F +  + S+ +EL  +MK   + PD  ++ +++  L +  E+
Sbjct: 539 ESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 137/426 (32%), Positives = 220/426 (51%), Gaps = 7/426 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +  +++K    P+  TF   I+GLC +  I EAA L   +   G  PDV +Y
Sbjct: 230 GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISY 289

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ G C+ S  + A     +M N     GV  EPN  TY TII+G CK G +  A ++
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNS----GV--EPNEFTYNTIINGFCKAGMMQNADKI 343

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L     K   P+  TY+S+I G C   D N A  +F E M++G + +++ +N ++  L K
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A +L+  M++HG  PD +TYN +++G C  G ++ A  +     + GC   +F+
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFT 463

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+GYCK + ++ A+ +   MLS GI PDV+ +NTL  GL +  +++     F  M 
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   +  TY   I+  CK+  + EA+ELF  ++      DI    +LI GLC +G L+
Sbjct: 524 EKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELD 583

Query: 362 IALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A ELF ++        +   ++IMI   C    +  A  LF  M  +   P+  T+ ++
Sbjct: 584 KAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643

Query: 421 IRGFIR 426
           I  + +
Sbjct: 644 IDSYCK 649



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 241/480 (50%), Gaps = 19/480 (3%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            + +   +LK    PD +TF  LI  LC +  + E+  LF+K+   G  P++FT+   + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GLCR      A  L E + +          P+ ++Y T+I G CK   + +A+  L +M 
Sbjct: 260 GLCRKGAIDEAARLLESIVSEG------LTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +  ++PN  TY ++I GFC A     A ++  + M +G  P+  T++ +++ LC +G M+
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  +    ++ G +     YNTL+ G    G V  A +L   M   GC   +++Y++++
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           NG CK   +  A  + ++ ++KG  PD+   NTL  G  +   +++A ++ D M  +G+ 
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGIT 493

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D  TY T ++GLCK   +   V+ F  +    C  +I  YN LI+  CK  ++  A+EL
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVPNVITFDMLIRGFI 425
           F+ +    L P++VT   +I GLC++G++DKA +LF+ +E E     +   F+++I  F 
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFC 613

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN------------EISLNSLPSFT 473
                S   +L HKM   +  PD     +++D   K              IS   +PSFT
Sbjct: 614 EKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFT 673



 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 237/448 (52%), Gaps = 7/448 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L  I+    TPD +++ +LI G C  S+++EA     K+   G EP+ FTY
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTY 324

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++NG C+      A  +  +        G +  P+  TY+++I+GLC +G +++A  +
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFK----GFI--PDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +  +K  K +++ Y ++++G        +A +L  +MM+ G  P++ T+N++++ LCK
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A+ +L+  I  G  PD FT+NTL+DG+C    ++ A E+  +M S G    V +
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+NG CK ++++  +  +  ML KG  P+++ +N L     +  +V  A +LF EM+
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK 558

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRL 360
             G+  D  T  T I GLC NG + +A ELF T+ +  K  +    +N +I+  C+   +
Sbjct: 559 TRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNV 618

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            +A +LF  +      P+  TY +MI   C  G +D A    L+     +VP+  T   +
Sbjct: 619 SMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKV 678

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD 448
           +      +  S+ + +++ M +  ++P+
Sbjct: 679 LNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 206/447 (46%), Gaps = 41/447 (9%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  ++    R      A+N+FE M   +      CEP+  +Y  I++ L + G+  +A +
Sbjct: 79  YIGIMRDYGRKGKVQEAVNVFERMDFYD------CEPSVQSYNAIMNILVEYGYFSQAHK 132

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           + ++MKD  I P+V T+T  ++ FC       A RL   M  QG + N V++  ++    
Sbjct: 133 VYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFY 192

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K     EA  L D M++ G+ PD  T+N L+   C  G V  +++LF  +   G    +F
Sbjct: 193 KENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLF 252

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++I I G C+   I+ A  L   ++S+G+ PDV+ +NTL  G  +  ++  A     +M
Sbjct: 253 TFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +GV  + +TY T I+G CK G +  A ++           D   Y+SLI+GLC  G +
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDM 372

Query: 361 EIALELF-------------------RSLPCGVLV----------------PNVVTYSIM 385
             A+ +F                   + L    LV                P++ TY+++
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLV 432

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + GLC  G +  A  +  D      +P++ TF+ LI G+ +     K IE+L  M    +
Sbjct: 433 VNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGI 492

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSF 472
            PD    + +++ L K     N + +F
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTF 519



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 205/423 (48%), Gaps = 45/423 (10%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV- 135
           AL +F ++   +G F    E    TY  +I+ L   G  +  +++L +M+ KN+   ++ 
Sbjct: 23  ALKMFNQVKTEDG-FKHTLE----TYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLE 76

Query: 136 -TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
             Y  ++R +       EA  +F  M     +P+V ++N IM+ L + G   +A ++   
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK-NK 253
           M   G+ PD +T+   +  FC+TGR   A  L  +M   GC+    SY  +I+G+ K N 
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +IE A  L+ EML +GI PD++  N L   L +   V+ + KLF ++ + GV  + +T+ 
Sbjct: 197 QIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255

Query: 314 TFIDGLCKNGYIVEAVELFHTL------------RILKCEFDIRA--------------- 346
            FI GLC+ G I EA  L  ++              L C F   +               
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315

Query: 347 --------YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
                   YN++I+G CK+G ++ A ++ R       +P+  TYS +I GLCNDG M++A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             +F +  E     ++I ++ L++G  +     + ++L+  M E    PD    ++VV+ 
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 459 LAK 461
           L K
Sbjct: 436 LCK 438



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 159/346 (45%), Gaps = 15/346 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +S    +L   +     PD  TF +LI G C +  + +A  +   +   G  PDV T
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+       ++ F+ M          C PN +TY  +I+  CK+  V +A E
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKG------CTPNIITYNILIESFCKDRKVSEAME 552

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDEL 179
           L  +MK + + P++VT  ++I G C   + ++A  LF+ +  +     +   FN++++  
Sbjct: 553 LFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAF 612

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+   +  A +L   M      PD +TY  ++D +C TG ++ A    +   S G   + 
Sbjct: 613 CEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSF 672

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE-RAFKLFD 298
            +   ++N  C    +  A+ + + M+  GI P+ V        +FE  + E  A K+  
Sbjct: 673 TTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV------NSIFEADKKEVAAPKIVV 726

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
           E          ++Y    DG+ +N  +VEA  L + +   K +  +
Sbjct: 727 EYLLKKSHITYYSYELLYDGI-RNRKVVEARPLLYKVAYQKAKLQL 771


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 148/455 (32%), Positives = 240/455 (52%), Gaps = 12/455 (2%)

Query: 12  GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
           G + +    P  VT+ ++I GLC  + +     LF +L   G  PDV TY TL++ LC+ 
Sbjct: 70  GEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKA 129

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--N 129
                A  L   M++        C PN VTY+ +I+GLCK G +D+A+EL+ +M  K  +
Sbjct: 130 GDLEEARRLHGGMSSRG------CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 183

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDELCKNGKMDE 187
           + PN++TY S + G C      EA  L   + D    V P+ VTF+ ++D LCK G+ DE
Sbjct: 184 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 243

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A    D MI  G  P+  TYN L++G C   ++  A  +  SM   G    V +YS+L++
Sbjct: 244 ACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 301

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
            +CK   ++ AL L   M S+G  P+VV  N++  GL +  +   AF++  ++    +  
Sbjct: 302 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVP 361

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D  T+   I G CK G   +A  LF  +     + D+  + +LIDGLCK+G++E A ++ 
Sbjct: 362 DKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDIL 421

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    + PNVVTY++++ GLC  G++++  +   +M  +  VP  +T+  L+    R 
Sbjct: 422 DLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRA 481

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +     ++L+ K+K     PD    +I+VD L K+
Sbjct: 482 SRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKS 516



 Score =  257 bits (656), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 143/447 (31%), Positives = 232/447 (51%), Gaps = 12/447 (2%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G  +   ++K    PD VT+ +LI  LC    + EA  L   +   GC P+V TY+ L+N
Sbjct: 100 GMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLIN 159

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCE--PNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           GLC+      A  L +EM   +      C+  PN +TY + +DGLCK+    +A EL+  
Sbjct: 160 GLCKVGRIDEARELIQEMTRKS------CDVLPNIITYNSFLDGLCKQSMTAEACELMRS 213

Query: 125 MKDKNIK--PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           ++D +++  P+ VT++++I G C     +EA     +M+  G  PNVVT+N +++ LCK 
Sbjct: 214 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKA 271

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            KM+ A  +++ M+  GV PD  TY+ L+D FC   RV+ A EL   M S GC   V ++
Sbjct: 272 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 331

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + +I+G CK+     A  +  ++ ++ + PD V  N L  G  +    E+A  LF+EM  
Sbjct: 332 NSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVA 391

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D  T+   IDGLCK G +  A ++   +  L    ++  YN L+ GLCKSGR+E 
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEE 451

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             E    +     VP  +TY  ++  LC   + D A  L   ++     P+ +T+++L+ 
Sbjct: 452 PCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVD 511

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDA 449
           G  +  +  + I +L +M      PD+
Sbjct: 512 GLWKSGKTEQAITVLEEMVGKGHQPDS 538



 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 232/439 (52%), Gaps = 8/439 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PDVFTYTTLVNGLCRTSHTIVAL 78
           P+ VT++ LI GLC   RI EA  L  ++    C+  P++ TY + ++GLC+ S T  A 
Sbjct: 149 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEAC 208

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L   + +G+    +   P+TVT++T+IDGLCK G  D+A      M      PNVVTY 
Sbjct: 209 ELMRSLRDGS----LRVSPDTVTFSTLIDGLCKCGQTDEACND--DMIAGGYVPNVVTYN 262

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +++ G C A     A  +   M+D+GV P+V+T++V++D  CK  ++DEA  LL  M   
Sbjct: 263 ALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR 322

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  P+  T+N+++DG C + R   A ++ + + +        +++ILI G CK    E A
Sbjct: 323 GCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQA 382

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            +L+ EM++K ++PDV+    L  GL +  QVE A  + D M   GV  +  TY   + G
Sbjct: 383 SALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHG 442

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK+G I E  E    +    C  +   Y SL+  LC++ R + AL+L   L      P+
Sbjct: 443 LCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPD 502

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VTY+I++ GL   G+ ++A  +  +M      P+  TF     G  R    +  +ELL 
Sbjct: 503 TVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLR 562

Query: 439 KMKEINVMPDASIVSIVVD 457
            +    ++PDA+  S ++D
Sbjct: 563 VVLAKGMLPDATTCSSILD 581



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/414 (35%), Positives = 221/414 (53%), Gaps = 21/414 (5%)

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           V  Y  ++  LCR   T  AL +F  EMA      GV   P  VTY TII+GLCK   + 
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARD----GVA--PTIVTYNTIINGLCKSNELG 98

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
              EL  ++  +   P+VVTY ++I   C A D  EA+RL   M  +G  PNVVT++V++
Sbjct: 99  AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158

Query: 177 DELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLTGRVNHAKELFVSME--S 232
           + LCK G++DEA  L+  M +    V P+  TYN+ LDG C       A EL  S+   S
Sbjct: 159 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 218

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           +       ++S LI+G CK  + + A +   +M++ G  P+VV +N L  GL +  ++ER
Sbjct: 219 LRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMER 276

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  + + M   GV  D  TY   +D  CK   + EA+EL H +    C  ++  +NS+ID
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336

Query: 353 GLCKSGR----LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           GLCKS R     +IAL+++  +    LVP+ VT++I+I G C  G  ++A  LF +M   
Sbjct: 337 GLCKSDRSGEAFQIALQVYNRM----LVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 392

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + P+V+TF  LI G  +  +     ++L  M  + V P+    +++V  L K+
Sbjct: 393 NMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKS 446



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 221/429 (51%), Gaps = 13/429 (3%)

Query: 26  FTSLIKGLCAESRIMEAAALFT-KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           +  +++ LC       A  +F  ++   G  P + TY T++NGLC+++     + LFEE+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                       P+ VTY T+ID LCK G +++A+ L   M  +   PNVVTY+ +I G 
Sbjct: 108 VKRGHH------PDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161

Query: 145 CYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR- 201
           C     +EA+ L  EM  +   V PN++T+N  +D LCK     EA  L+  +    +R 
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 221

Query: 202 -PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T++TL+DG C  G+ + A      M + G    V +Y+ L+NG CK  ++E A +
Sbjct: 222 SPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +   M+ KG+ PDV+ ++ L     +  +V+ A +L   M   G   +  T+ + IDGLC
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+    EA ++   +       D   +N LI G CK+G  E A  LF  +    + P+V+
Sbjct: 340 KSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVM 399

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T+  +I GLC  GQ++ ARD+   M    V PNV+T+++L+ G  +     +  E L +M
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459

Query: 441 KEINVMPDA 449
                +P++
Sbjct: 460 VSSGCVPES 468



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 167/306 (54%), Gaps = 13/306 (4%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDL----MIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           +V  +N+++  LC+ G   E +R L++    M + GV P   TYNT+++G C +  +   
Sbjct: 44  SVADYNIVLQSLCRAG---ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAG 100

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            ELF  +   G    V +Y+ LI+  CK  ++E A  L+  M S+G  P+VV ++ L  G
Sbjct: 101 MELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLING 160

Query: 284 LFEIHQVERAFKLFDEMQRNG--VAADTWTYRTFIDGLCKNGYIVEAVELFHTLR--ILK 339
           L ++ +++ A +L  EM R    V  +  TY +F+DGLCK     EA EL  +LR   L+
Sbjct: 161 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 220

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D   +++LIDGLCK G+ + A      +  G  VPNVVTY+ ++ GLC   +M++A 
Sbjct: 221 VSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAH 278

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +   M +  V P+VIT+ +L+  F + +   + +ELLH M      P+    + ++D L
Sbjct: 279 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 338

Query: 460 AKNEIS 465
            K++ S
Sbjct: 339 CKSDRS 344



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 137/279 (49%), Gaps = 6/279 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     +L  +     TP+ VTF S+I GLC   R  EA  +  ++      PD  T+ 
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFN 367

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+ G C+  +   A  LFEEM   N       +P+ +T+  +IDGLCK G V+ A+++L
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKN------MQPDVMTFGALIDGLCKAGQVEAARDIL 421

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M +  + PNVVTY  ++ G C +    E      EM+  G  P  +T+  ++  LC+ 
Sbjct: 422 DLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRA 481

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            + D+A +L+  +   G  PD  TYN L+DG   +G+   A  +   M   G +   F++
Sbjct: 482 SRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 541

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
           +    G  ++  + G + L   +L+KG+ PD    +++ 
Sbjct: 542 AACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 251/464 (54%), Gaps = 7/464 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  S    V  R+      PD  T T  +K  C   R   A  L   +   GCE +  +Y
Sbjct: 125 GYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY 184

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G  + +  I A +LF+EM         +C P+ +T+  +I  LCK+G V ++++L
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQG-----IC-PDILTFNKLIHVLCKKGNVQESEKL 238

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++  + + PN+ T+   I+G C     +EA RL   ++ +G+ P+V+++N ++   CK
Sbjct: 239 FSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + K+ EA   L  M+  GV P+ FTYNT+++GFC  G + +A ++       G     F+
Sbjct: 299 HSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFT 358

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LING C + ++  A++++ E + KG K  ++++NTL  GL +   V +A +L  +M 
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G + D WTY   ++GLCK G + +A  + +      C  DI  +N+LIDG CK   ++
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+E+  ++    + P+V+TY+ ++ GLC   ++D   D F  M E    PN+IT+++LI
Sbjct: 479 KAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVDLLAKNEI 464
             F +  + S+ +EL  +MK   + PD  ++ +++  L +  E+
Sbjct: 539 ESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 243/481 (50%), Gaps = 19/481 (3%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            + +   +LK    PD +TF  LI  LC +  + E+  LF+K+   G  P++FT+   + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GLCR      A  L E + +     G+   P+ ++Y T+I G CK   + +A+  L +M 
Sbjct: 260 GLCRKGAIDEAARLLESIVSE----GLT--PDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +  ++PN  TY ++I GFC A     A ++  + M +G  P+  T++ +++ LC +G M+
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  +    ++ G +     YNTL+ G    G V  A +L   M   GC   +++Y++++
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           NG CK   +  A  + ++ ++KG  PD+   NTL  G  +   +++A ++ D M  +G+ 
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGIT 493

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D  TY T ++GLCK   +   V+ F  +    C  +I  YN LI+  CK  ++  A+EL
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVPNVITFDMLIRGFI 425
           F+ +    L P++VT   +I GLC++G++DKA +LF+ +E E     +   F+++I  F 
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFC 613

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN------------EISLNSLPSFT 473
                S   +L HKM   +  PD     +++D   K              IS   +PSFT
Sbjct: 614 XKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFT 673

Query: 474 V 474
            
Sbjct: 674 T 674



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/426 (32%), Positives = 220/426 (51%), Gaps = 7/426 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +  +++K    P+  TF   I+GLC +  I EAA L   +   G  PDV +Y
Sbjct: 230 GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISY 289

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ G C+ S  + A     +M N     GV  EPN  TY TII+G CK G +  A ++
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNS----GV--EPNEFTYNTIINGFCKAGMMQNADKI 343

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L     K   P+  TY+S+I G C   D N A  +F E M++G + +++ +N ++  L K
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A +L+  M++HG  PD +TYN +++G C  G ++ A  +     + GC   +F+
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFT 463

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+GYCK + ++ A+ +   MLS GI PDV+ +NTL  GL +  +++     F  M 
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   +  TY   I+  CK+  + EA+ELF  ++      DI    +LI GLC +G L+
Sbjct: 524 EKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELD 583

Query: 362 IALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A ELF ++        +   ++IMI   C    +  A  LF  M  +   P+  T+ ++
Sbjct: 584 KAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643

Query: 421 IRGFIR 426
           I  + +
Sbjct: 644 IDSYCK 649



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 236/448 (52%), Gaps = 7/448 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L  I+    TPD +++ +LI G C  S+++EA     K+   G EP+ FTY
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTY 324

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++NG C+      A  +  +        G +  P+  TY+++I+GLC +G +++A  +
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFK----GFI--PDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +  +K  K +++ Y ++++G        +A +L  +MM+ G  P++ T+N++++ LCK
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A+ +L+  I  G  PD FT+NTL+DG+C    ++ A E+  +M S G    V +
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+NG CK ++++  +  +  ML KG  P+++ +N L     +  +V  A +LF EM+
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK 558

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRL 360
             G+  D  T  T I GLC NG + +A ELF T+ +  K  +    +N +I+  C    +
Sbjct: 559 TRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNV 618

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            +A +LF  +      P+  TY +MI   C  G +D A    L+     +VP+  T   +
Sbjct: 619 SMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKV 678

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD 448
           +      +  S+ + +++ M +  ++P+
Sbjct: 679 LNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 206/447 (46%), Gaps = 41/447 (9%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  ++    R      A+N+FE M   +      CEP+  +Y  I++ L + G+  +A +
Sbjct: 79  YIGIMRDYGRKGKVQEAVNVFERMDFYD------CEPSVQSYNAIMNILVEYGYFSQAHK 132

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           + ++MKD  I P+V T+T  ++ FC       A RL   M  QG + N V++  ++    
Sbjct: 133 VYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFY 192

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K     EA  L D M++ G+ PD  T+N L+   C  G V  +++LF  +   G    +F
Sbjct: 193 KENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLF 252

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++I I G C+   I+ A  L   ++S+G+ PDV+ +NTL  G  +  ++  A     +M
Sbjct: 253 TFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +GV  + +TY T I+G CK G +  A ++           D   Y+SLI+GLC  G +
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDM 372

Query: 361 EIALELF-------------------RSLPCGVLV----------------PNVVTYSIM 385
             A+ +F                   + L    LV                P++ TY+++
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLV 432

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + GLC  G +  A  +  D      +P++ TF+ LI G+ +     K IE+L  M    +
Sbjct: 433 VNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGI 492

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSF 472
            PD    + +++ L K     N + +F
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTF 519



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 205/423 (48%), Gaps = 45/423 (10%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV- 135
           AL +F ++   +G F    E    TY  +I+ L   G  +  +++L +M+ KN+   ++ 
Sbjct: 23  ALKMFNQVKTEDG-FKHTLE----TYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLE 76

Query: 136 -TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
             Y  ++R +       EA  +F  M     +P+V ++N IM+ L + G   +A ++   
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK-NK 253
           M   G+ PD +T+   +  FC+TGR   A  L  +M   GC+    SY  +I+G+ K N 
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +IE A  L+ EML +GI PD++  N L   L +   V+ + KLF ++ + GV  + +T+ 
Sbjct: 197 QIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255

Query: 314 TFIDGLCKNGYIVEAVELFHTL------------RILKCEFDIRA--------------- 346
            FI GLC+ G I EA  L  ++              L C F   +               
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315

Query: 347 --------YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
                   YN++I+G CK+G ++ A ++ R       +P+  TYS +I GLCNDG M++A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             +F +  E     ++I ++ L++G  +     + ++L+  M E    PD    ++VV+ 
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 459 LAK 461
           L K
Sbjct: 436 LCK 438



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 9/282 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +S    +L   +     PD  TF +LI G C +  + +A  +   +   G  PDV T
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+       ++ F+ M          C PN +TY  +I+  CK+  V +A E
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKG------CTPNIITYNILIESFCKDRKVSEAME 552

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDEL 179
           L  +MK + + P++VT  ++I G C   + ++A  LF+ +  +     +   FN++++  
Sbjct: 553 LFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAF 612

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C    +  A +L   M      PD +TY  ++D +C TG ++ A    +   S G   + 
Sbjct: 613 CXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSF 672

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            +   ++N  C    +  A+ + + M+  GI P+ V  N++F
Sbjct: 673 TTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV--NSIF 712


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/459 (32%), Positives = 243/459 (52%), Gaps = 12/459 (2%)

Query: 7   GFVV-----LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GFV+       ++LK    P+  TF   I+GLC E  +  A  L   +   G  PDV TY
Sbjct: 309 GFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTY 368

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ GLCR S  + A     +M NG        EPN  TY +IIDG CK+G V  A  +
Sbjct: 369 NTVICGLCRKSRVVEAEECLHKMVNGG------FEPNDFTYNSIIDGYCKKGMVVDANRI 422

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L     K  KP+  TY S++ GFC   D ++A  +F + + +G++P+++ +N ++  LC+
Sbjct: 423 LKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQ 482

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +  A +L++ M + G +PD +TYN +++G C  G ++ A  L     + GC   +F+
Sbjct: 483 QGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFT 542

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++GYC+  +++ A+ L + M S+G+ PDV+ +NTL  GL +  + E   ++F  M 
Sbjct: 543 YNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMT 602

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G A +  TY T I+ LC +  + EAV+L   ++      D+ ++ +LI G CK G L+
Sbjct: 603 EKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLD 662

Query: 362 IALELFRSLPCGVLVPN-VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A  LFR +     V +   TY+I+I        M  A  LF +M++N   P+  T+ +L
Sbjct: 663 GAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVL 722

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           I GF +    ++  + L +  E   +P  +    V++ L
Sbjct: 723 IDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL 761



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 232/447 (51%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  +    V  R+       D  T+T  IK  C   R   A  L   + V GC  +   Y
Sbjct: 204 GYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAY 263

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+V G         A  LF+EM         +C P+  T+  ++  LCK+GFV +++ L
Sbjct: 264 CTVVTGFYEFGDNDRARELFDEMLEC-----CLC-PDVTTFNKLVHALCKKGFVLESERL 317

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++  + + PN+ T+   I+G C     + A RL   +  +G++P+VVT+N ++  LC+
Sbjct: 318 FDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCR 377

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA   L  M+  G  P+ FTYN+++DG+C  G V  A  +       G K   F+
Sbjct: 378 KSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFT 437

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  L+NG+C++ + + A++++ + L KG++P ++++NTL  GL +   +  A +L +EM 
Sbjct: 438 YCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMA 497

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D WTY   I+GLCK G + +A  L        C  DI  YN+L+DG C+  +L+
Sbjct: 498 EKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLD 557

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+EL   +    + P+V+TY+ ++ GLC   + ++  ++F  M E    PN+IT++ +I
Sbjct: 558 SAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTII 617

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
                  + ++ ++LL +MK   + PD
Sbjct: 618 ESLCNSKKVNEAVDLLGEMKSKGLTPD 644



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 247/471 (52%), Gaps = 15/471 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +LG + +    PD VT+ ++I GLC +SR++EA     K+   G EP+ FTY
Sbjct: 344 GSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTY 403

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C+    + A  + ++            +P+  TY ++++G C++G  D+A  +
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKG------FKPDEFTYCSLVNGFCQDGDPDQAMAV 457

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
                 K ++P+++ Y ++I+G C       A +L  EM ++G +P++ T+N+I++ LCK
Sbjct: 458 FKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCK 517

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A+ L+   I  G  PD FTYNTL+DG+C   +++ A EL   M S G    V +
Sbjct: 518 MGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVIT 577

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+NG CK  + E  + ++  M  KG  P+++ +NT+   L    +V  A  L  EM+
Sbjct: 578 YNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMK 637

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR----AYNSLIDGLCKS 357
             G+  D  ++ T I G CK G +  A  LF   R ++ ++D+      YN +I    + 
Sbjct: 638 SKGLTPDVVSFGTLITGFCKVGDLDGAYGLF---RGMEKQYDVSHTTATYNIIISAFSEQ 694

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
             +++AL LF  +      P+  TY ++I G C  G +++     L+  E   +P++ TF
Sbjct: 695 LNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTF 754

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
             ++      ++  + + ++H M + +++PD   V+ + +   K  I+ ++
Sbjct: 755 GRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT--VNTIFEADKKGHITYHA 803



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 6/381 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A++ FE M   N      C+P+  +Y  I++ L + G+ ++A ++ ++MKDK ++ +V T
Sbjct: 174 AVDTFERMDLFN------CDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYT 227

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           YT  I+ FC       A RL   M   G   N V +  ++    + G  D A  L D M+
Sbjct: 228 YTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEML 287

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           +  + PD  T+N L+   C  G V  ++ LF  +   G    +F+++I I G CK   ++
Sbjct: 288 ECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLD 347

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+ L   +  +G++PDVV +NT+  GL    +V  A +   +M   G   + +TY + I
Sbjct: 348 RAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSII 407

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           DG CK G +V+A  +         + D   Y SL++G C+ G  + A+ +F+      L 
Sbjct: 408 DGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLR 467

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+++ Y+ +I GLC  G +  A  L  +M E    P++ T++++I G  ++   S    L
Sbjct: 468 PSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHL 527

Query: 437 LHKMKEINVMPDASIVSIVVD 457
           +        +PD    + +VD
Sbjct: 528 IGDAITKGCIPDIFTYNTLVD 548



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 10/300 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +S    ++G  +     PD  T+ +L+ G C + ++  A  L  ++   G  PDV T
Sbjct: 518 MGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVIT 577

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+T+ +   + +F+ M          C PN +TY TII+ LC    V++A +
Sbjct: 578 YNTLLNGLCKTAKSEEVMEIFKAMTEKG------CAPNIITYNTIIESLCNSKKVNEAVD 631

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDEL 179
           LL +MK K + P+VV++ ++I GFC   D + A  LF  M  Q  V     T+N+I+   
Sbjct: 632 LLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAF 691

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            +   M  A RL   M ++G  PD +TY  L+DGFC TG VN   +  +     G   ++
Sbjct: 692 SEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSL 751

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK-LFD 298
            ++  ++N  C   +++ A+ +   M+ K I PD V  NT+F    + H    A++ L+D
Sbjct: 752 TTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV--NTIFEADKKGHITYHAYEFLYD 809



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 176/351 (50%)

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           ++G + +A +   +M   N  P+V +Y +++        +N+A ++++ M D+ V+ +V 
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T+ + +   C+ G+   A RLL  M   G   +A  Y T++ GF   G  + A+ELF  M
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
                   V +++ L++  CK   +  +  L+ ++L +G+ P++   N    GL +   +
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           +RA +L   + R G+  D  TY T I GLC+   +VEA E  H +     E +   YNS+
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           IDG CK G +  A  + +        P+  TY  ++ G C DG  D+A  +F D     +
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            P++I ++ LI+G  +       ++L+++M E    PD    +++++ L K
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCK 517


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/426 (34%), Positives = 228/426 (53%), Gaps = 12/426 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G  +L ++      PD V++ +++KGLC   R  +   L  ++   GC P+V T+
Sbjct: 192 GCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATF 251

Query: 62  TTLVNGLCRTSHTIVALNLFE---EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            TL+  LCR         LFE   E  +   E G  C P+   Y TIIDG+CK+G  + A
Sbjct: 252 NTLIAYLCRN-------GLFEQVHEALSQMPEHG--CTPDLRMYATIIDGICKDGHHEVA 302

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            ++L +M    +KPNVV Y +V++G C A+ W EA+ L  EM  +    + VTFN+++D 
Sbjct: 303 NDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDF 362

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            C+NG +D    LL+ M++HG  PD  TY T+++GFC  G V+ A  L  +M + GCK  
Sbjct: 363 FCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 422

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
             SY+I++ G C+ +    A  L S M+ +G  P+ V  NTL   + +   VE+A +L  
Sbjct: 423 TISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLK 482

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M  NG + D  +Y T IDGL K G   EA+EL + +       +   Y+S+   L + G
Sbjct: 483 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREG 542

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R +  +++F S+    +  +   Y+ +I  LC   + D+A D F  M  N  +PN  T+ 
Sbjct: 543 RTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 602

Query: 419 MLIRGF 424
           +LIRG 
Sbjct: 603 ILIRGL 608



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 216/446 (48%), Gaps = 7/446 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C T D+     ++  +C +  + E   L  KL  FGCEPD+ +Y  ++ GLC      
Sbjct: 172 KGC-TLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWD 230

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
               L  EM        V C PN  T+ T+I  LC+ G  ++  E L QM +    P++ 
Sbjct: 231 DVEELMVEMVR------VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLR 284

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
            Y ++I G C       A  +   M   G++PNVV +N ++  LC   + +EA  LL  M
Sbjct: 285 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            Q     D  T+N L+D FC  G V+   EL   M   GC   V +Y+ +ING+CK   +
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLV 404

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A+ L   M + G KP+ + +  +  GL    +   A +L   M + G   +  T+ T 
Sbjct: 405 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTL 464

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I+ +CK G + +A+EL   + +  C  D+ +Y+++IDGL K+G+ E ALEL   +    +
Sbjct: 465 INFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 524

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN + YS M   L  +G+ DK   +F  +++  V  +   ++ +I    +  E  + I+
Sbjct: 525 TPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAID 584

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAK 461
               M     MP+ S  +I++  LA 
Sbjct: 585 FFAYMVSNGCMPNESTYTILIRGLAS 610



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 220/442 (49%), Gaps = 8/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T+  +++ LCA   I +A  +  ++ + GC         ++   CR      A+  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            + + A G       C  ++     ++  +C++G VD+  ELL ++     +P++V+Y +
Sbjct: 166 LQVLHAKG-------CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNA 218

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C AK W++ + L +EM+  G  PNV TFN ++  LC+NG  ++    L  M +HG
Sbjct: 219 VLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHG 278

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   Y T++DG C  G    A ++   M S G K  V  Y+ ++ G C  +  E A 
Sbjct: 279 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 338

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L +EM  +    D V  N L     +   V+R  +L ++M  +G   D  TY T I+G 
Sbjct: 339 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 398

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G + EAV L   +    C+ +  +Y  ++ GLC++ R   A EL   +     +PN 
Sbjct: 399 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 458

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++ +I  +C  G +++A +L   M  N   P++I++  +I G  +  +  + +ELL+ 
Sbjct: 459 VTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 518

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M    + P+  I S +   L++
Sbjct: 519 MINKGITPNTIIYSSMASALSR 540



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 200/385 (51%), Gaps = 6/385 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  TF +LI  LC      +     +++   GC PD+  Y T+++G+C+  H  VA ++
Sbjct: 246 PNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 305

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M +    +G+  +PN V Y T++ GLC     ++A++LL +M  ++   + VT+  +
Sbjct: 306 LSRMPS----YGL--KPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 359

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  FC     +    L  +M++ G  P+V+T+  +++  CK G +DEA  LL  M   G 
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P+  +Y  +L G C   R   A+EL   M   GC     +++ LIN  CK   +E A+ 
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +ML  G  PD++ ++T+  GL +  + E A +L + M   G+  +T  Y +    L 
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G   + +++F +++      D   YN++I  LCK    + A++ F  +     +PN  
Sbjct: 540 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 599

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDM 405
           TY+I+I GL ++G + +A+DL  ++
Sbjct: 600 TYTILIRGLASEGLVREAQDLLSEL 624



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 141/277 (50%), Gaps = 7/277 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L ++L+    PD +T+T++I G C E  + EA  L   +   GC+P+  +Y
Sbjct: 367 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 426

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++ GLCR    + A  L   M          C PN VT+ T+I+ +CK+G V++A EL
Sbjct: 427 TIVLKGLCRAERWVDAQELISHMIQQG------CLPNPVTFNTLINFMCKKGLVEQAIEL 480

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM      P++++Y++VI G   A    EA  L   M+++G+ PN + ++ +   L +
Sbjct: 481 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSR 540

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ D+  ++ D +    VR DA  YN ++   C     + A + F  M S GC     +
Sbjct: 541 EGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 600

Query: 242 YSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIH 277
           Y+ILI G      +  A  L SE+ S + ++  +V H
Sbjct: 601 YTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRH 637



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 177/402 (44%), Gaps = 12/402 (2%)

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+  LC    T  A    +   +  G          V Y  +I G C+ G V  A+ L
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAG---------VVAYNAMIAGYCRAGQVAAARRL 98

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +    + PN  TY  ++R  C      +A  +  EM  +G        +VI++  C+
Sbjct: 99  AAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACR 155

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A R L ++   G   D+   N ++   C  G V+   EL   + S GC+  + S
Sbjct: 156 GGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVS 215

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++ G C  K  +    L  EM+  G  P+V   NTL   L      E+  +   +M 
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMP 275

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   D   Y T IDG+CK+G+   A ++   +     + ++  YN+++ GLC + R E
Sbjct: 276 EHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWE 335

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L   +       + VT++I++   C +G +D+  +L   M E+  +P+VIT+  +I
Sbjct: 336 EAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVI 395

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            GF +     + + LL  M      P+    +IV+  L + E
Sbjct: 396 NGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAE 437


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/452 (34%), Positives = 241/452 (53%), Gaps = 16/452 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL------VNGLCRTSHTI 75
           D  T   LI  LC   +     A+   +   G EP + T  T+      VNGLC+   T 
Sbjct: 111 DVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTS 170

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            AL   ++M   N       EPN V Y  I+DGLCK G V +A  L  +M   N++PNVV
Sbjct: 171 GALESLKKMVKRN------LEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVV 224

Query: 136 TYTSVIRGFC-YAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           TY  +I+G C     W E   LF EM+ ++G+ P+V TF+++++  CK G +  A  ++ 
Sbjct: 225 TYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVG 284

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILINGYCK 251
            MI+ GV  +  TYN+L+ G+CL  R+  A  +F  M  E  GC  +V +Y+ LI+G+CK
Sbjct: 285 FMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCK 344

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            K++  A+SL SEM+ KG+ PDV    +L  G FE+ +   A +LF  M+  G      T
Sbjct: 345 VKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQT 404

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
               +DGL K     EA+ LF  +     + DI  YN ++DG+CK G+L  A +L   + 
Sbjct: 405 CAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVL 464

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              L  +  T++IMI GLC +G +D A +L   M+EN   PN  ++++ ++G +R  + S
Sbjct: 465 VKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIS 524

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +  + L  MK+     DA+   +++  L+ NE
Sbjct: 525 RSRKYLQIMKDKGFPVDATTAELLIRFLSANE 556



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 195/359 (54%), Gaps = 8/359 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G  S     L +++K    P+ V + +++ GLC    + EA  LF ++ V   EP+V T
Sbjct: 166 IGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVT 225

Query: 61  YTTLVNGLC-RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y  L+ GLC         + LF EM     E G+V  P+  T++ +++G CKEG + +A+
Sbjct: 226 YNCLIQGLCGEVGGWREGVGLFNEMV---AEKGIV--PDVQTFSILVNGFCKEGLLLRAE 280

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM--DQGVQPNVVTFNVIMD 177
            ++  M    ++ NVVTY S+I G+C      EA R+F  M+   +G  P+VVT+N ++ 
Sbjct: 281 SMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIH 340

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
             CK  K+++A  LL  M+  G+ PD FT+ +L+ GF   G+   AKELF++M+  G   
Sbjct: 341 GWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVP 400

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            + + +++++G  K      A++L+  M   G+  D+VI+N +  G+ ++ ++  A KL 
Sbjct: 401 ILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLL 460

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
             +   G+  D++T+   I GLC+ G + +A EL   ++   C  +  +YN  + GL +
Sbjct: 461 SFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLR 519



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 157/324 (48%), Gaps = 16/324 (4%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT------GRVN 221
           +V T N++++ LC+  K      +L LM + G+ P   T NT+ +G C+       G  +
Sbjct: 111 DVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTS 170

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A E    M     +  V  Y+ +++G CK   +  AL L+ EM    ++P+VV +N L 
Sbjct: 171 GALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLI 230

Query: 282 VGLF-EIHQVERAFKLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
            GL  E+        LF+EM    G+  D  T+   ++G CK G ++ A  +   +  + 
Sbjct: 231 QGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIG 290

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSL-----PCGVLVPNVVTYSIMIGGLCNDGQ 394
            E ++  YNSLI G C   R+E A+ +F  +      C   +P+VVTY+ +I G C   +
Sbjct: 291 VELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGC---LPSVVTYNSLIHGWCKVKK 347

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           ++KA  L  +M    + P+V T+  LI GF  + +P    EL   MK+   +P     ++
Sbjct: 348 VNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAV 407

Query: 455 VVDLLAKNEISLNSLPSFTVHEQQ 478
           V+D L K  +   ++  F   E+ 
Sbjct: 408 VLDGLYKCWLDSEAMTLFRAMEKS 431



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 116/234 (49%), Gaps = 6/234 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+ SLI G C   ++ +A +L +++   G +PDVFT+T+L+ G       + A  L
Sbjct: 330 PSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKEL 389

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  M +  G+      P   T   ++DGL K     +A  L   M+   +  ++V Y  +
Sbjct: 390 FITMKD-QGQV-----PILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIM 443

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C     N+A++L   ++ +G++ +  T+N+++  LC+ G +D+A  LL  M ++G 
Sbjct: 444 LDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGC 503

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
            P+  +YN  + G      ++ +++    M+  G      +  +LI     N+E
Sbjct: 504 PPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLSANEE 557


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/392 (36%), Positives = 219/392 (55%), Gaps = 6/392 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + D  +FT LI   C  SR+  A ++  K+   G EP + T+ +L++G C  +    A +
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M           EPN V Y T+IDGLCK G ++ A ELL +M+ K +  +VVTY +
Sbjct: 163 LVILMVKSG------YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G CY+  W++A R+  +MM + + P+VVTF  ++D   K G +DEA  L   MIQ  
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V P+  TYN++++G C+ GR+  AK+ F  M S GC   V +Y+ LI+G+CK + ++  +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  M  +G   D+  +NTL  G  ++ ++  A  +F  M    V  D  T+   + GL
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C NG I  A+  F  +R  +    I AYN +I GLCK+ ++E A ELF  LP   + P+ 
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            TY+IMI GLC +G   +A +L   M+E  ++
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 224/441 (50%), Gaps = 8/441 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFT-KLRVFGCEPDVFTY 61
           R    F +   ++ S   P  V FT L+    A  R  E    F+ K+ ++G   D++++
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTA-TANLRRYETVIYFSQKMELYGISHDLYSF 109

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++  CR S    AL++  +M     + G   EP+ VT+ +++ G C    +  A  L
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMM----KLGY--EPSIVTFGSLLHGFCLVNRIGDAFSL 163

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           ++ M     +PNVV Y ++I G C   + N A  L  EM  +G+  +VVT+N ++  LC 
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+  +A+R+L  M++  + PD  T+  L+D F   G ++ A+EL+  M          +
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +ING C +  +  A   +  M SKG  P+VV +NTL  G  +   V+   KLF  M 
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G  AD +TY T I G C+ G +  A+++F  +   +   DI  +  L+ GLC +G +E
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL  F  +        +V Y+IMI GLC   +++KA +LF  +    V P+  T+ ++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 422 RGFIRINEPSKVIELLHKMKE 442
            G  +     +  EL+ +MKE
Sbjct: 464 LGLCKNGPRREADELIRRMKE 484



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 178/345 (51%), Gaps = 16/345 (4%)

Query: 2   GRVSHGFVVLGRI----------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV 51
           G + HGF ++ RI          +KS + P+ V + +LI GLC    +  A  L  ++  
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
            G   DV TY TL+ GLC +     A  +  +M   +        P+ VT+T +ID   K
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS------INPDVVTFTALIDVFVK 258

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
           +G +D+A+EL  +M   ++ PN VTY S+I G C      +AK+ F  M  +G  PNVVT
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +N ++   CK   +DE  +L   M   G   D FTYNTL+ G+C  G++  A ++F  M 
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           S      + ++ IL++G C N EIE AL  + +M        +V +N +  GL +  +VE
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +A++LF  +   GV  D  TY   I GLCKNG   EA EL   ++
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 161/333 (48%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           + A  L  +M      P++V +T ++      + +        +M   G+  ++ +F ++
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +   C+  ++  A  +L  M++ G  P   T+ +LL GFCL  R+  A  L + M   G 
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V  Y+ LI+G CKN E+  AL L +EM  KG+  DVV +NTL  GL    +   A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +  +M +  +  D  T+   ID   K G + EA EL+  +     + +   YNS+I+GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             GRL  A + F  +      PNVVTY+ +I G C    +D+   LF  M       ++ 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           T++ LI G+ ++ +    +++   M    V PD
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L  G+  +   E A +L+ EM+     P +V    L      + + E       +M+  G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           ++ D +++   I   C+   +  A+ +   +  L  E  I  + SL+ G C   R+  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            L   +      PNVV Y+ +I GLC +G+++ A +L  +ME+  +  +V+T++ L+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDES 484
                 S    +L  M + ++ PD    + ++D+  K + +L+          Q  VD +
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK-QGNLDEAQELYKEMIQSSVDPN 280

Query: 485 NV 486
           NV
Sbjct: 281 NV 282


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 247/461 (53%), Gaps = 6/461 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R     ++L  ++     P+ +T+ +LI G   +  I +A  +  ++   G E ++  + 
Sbjct: 291 RSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 350

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NG+C+      AL + +EM     E GV  EP++ TY+ +I+G C+   + +A ELL
Sbjct: 351 TLLNGVCKAGKMEKALEIMQEMM----EKGV--EPDSQTYSLLIEGHCRGQNMARAFELL 404

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +MK + + P V+TY+ +I G C   +      +  EM+  G++PN V +  +M    K 
Sbjct: 405 DEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKE 464

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+++E+  +L+ M + G+ PD F YN+L+ GFC   R+  A+   + M     +    +Y
Sbjct: 465 GRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 524

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
              I+GY K  E+E A   ++EMLS G+ P+V I+  L  G  +   V  AF +F  +  
Sbjct: 525 GAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILS 584

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             V  D  TY   I GL +NG + EA  +F  L+      +   YNSLI G CK G ++ 
Sbjct: 585 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 644

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A +L   +    + P++VTY+I+I GLC  G++++A++LF D+E   + PN +T+  ++ 
Sbjct: 645 ASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVD 704

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           G+ +   P+   +LL +M    V PDA I +++++   K E
Sbjct: 705 GYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEE 745



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 233/456 (51%), Gaps = 7/456 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L  ++ +   P+AV +T+L+     E R+ E+  +  ++R  G  PDVF Y
Sbjct: 430 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCY 489

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ G C+      A     EM            PN  TY   IDG  K G ++ A   
Sbjct: 490 NSLIIGFCKAKRMEEARTYLMEMLERR------LRPNAHTYGAFIDGYSKAGEMEIADRY 543

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + PNV  YT++I G C   +  EA  +F  ++ + V  +V T++V++  L +
Sbjct: 544 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 603

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NGKM EA  +   + + G+ P+AFTYN+L+ G C  G V+ A +L   M   G    + +
Sbjct: 604 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 663

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+G CK  EIE A +L+ ++  +G+ P+ V +  +  G  +      AF+L +EM 
Sbjct: 664 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 723

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  D + Y   ++  CK     +A++LF  + + K      ++N+LI+G CKSG+L+
Sbjct: 724 LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGFASTVSFNTLIEGYCKSGKLQ 782

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +     +PN VTY+ +I   C  G M +A+ L+L+M+E  V+P   T+  L+
Sbjct: 783 EANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 842

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            G+  I   S+V  L  +M    + PD     +++D
Sbjct: 843 HGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMID 878



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 217/425 (51%), Gaps = 7/425 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV    ++L R+ +    PD   + SLI G C   R+ EA     ++      P+  TY
Sbjct: 465 GRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 524

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              ++G  +     +A   F EM +     GV+  PN   YT +I+G CKEG V +A  +
Sbjct: 525 GAFIDGYSKAGEMEIADRYFNEMLS----CGVL--PNVGIYTALIEGHCKEGNVTEAFSV 578

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  + +  +V TY+ +I G       +EA  +F E+ ++G+ PN  T+N ++   CK
Sbjct: 579 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 638

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D+AS+LL+ M   G+ PD  TYN L+DG C  G +  AK LF  +E  G      +
Sbjct: 639 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 698

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +++GYCK+K    A  L  EML +G+ PD  I+N +     +  + E+A  LF EM 
Sbjct: 699 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 758

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G A+ T ++ T I+G CK+G + EA  L   +   +   +   Y SLID  CK+G + 
Sbjct: 759 EKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMG 817

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L+  +    ++P   TY+ ++ G  N G M +   LF +M    + P+ +T+ ++I
Sbjct: 818 EAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 877

Query: 422 RGFIR 426
             + R
Sbjct: 878 DAYCR 882



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 206/410 (50%), Gaps = 15/410 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+   +T+LI+G C E  + EA ++F  +       DV TY+ L++GL R      A  +
Sbjct: 554 PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGI 613

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F E+     E G++  PN  TY ++I G CK+G VDKA +LL +M  K I P++VTY  +
Sbjct: 614 FSELQ----EKGLL--PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNIL 667

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C A +   AK LF ++  +G+ PN VT+  ++D  CK+     A +LL+ M+  GV
Sbjct: 668 IDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV 727

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PDAF YN +L+  C   +   A +LF  M   G   TV S++ LI GYCK+ +++ A  
Sbjct: 728 PPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANH 786

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM+ K   P+ V + +L     +   +  A +L+ EMQ   V     TY + + G  
Sbjct: 787 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 846

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE-----LFRSLP--CG 373
             G + E   LF  +     E D   Y  +ID  C+ G +  A +     L + +P   G
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSG 906

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             +  + T S++  G    G MD+A ++   M +   V N  +   L+ G
Sbjct: 907 FRL-GLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 194/382 (50%), Gaps = 17/382 (4%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN+V +  ++D   K GF+ +A  + L  K+   +P++++  S++             ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNG----------KMDEASRLLD-------LMIQHG 199
           F  M    V P+V T+  ++   CK G          +M E +RLLD        M+  G
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD +TY+ L++GFC+  R   AK + + M  +G K    +Y+ LI+G+ +  +IE A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +  EM++ GI+ +++I NTL  G+ +  ++E+A ++  EM   GV  D+ TY   I+G 
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C+   +  A EL   ++  K    +  Y+ +I+GLC+ G L+    + R +    L PN 
Sbjct: 392 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 451

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           V Y+ ++     +G+++++R +   M E  ++P+V  ++ LI GF +     +    L +
Sbjct: 452 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 511

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M E  + P+A      +D  +K
Sbjct: 512 MLERRLRPNAHTYGAFIDGYSK 533



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 184/392 (46%), Gaps = 46/392 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+  F V   IL      D  T++ LI GL    ++ EA  +F++L+  G  P+ FTY
Sbjct: 570 GNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTY 629

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++G C+  +   A  L EEM            P+ VTY  +IDGLCK G +++AK L
Sbjct: 630 NSLISGSCKQGNVDKASQLLEEMCIKG------INPDIVTYNILIDGLCKAGEIERAKNL 683

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV------------ 169
              ++ + + PN VTY +++ G+C +K+   A +L  EM+ +GV P+             
Sbjct: 684 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCK 743

Query: 170 ----------------------VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                                 V+FN +++  CK+GK+ EA+ LL+ MI+    P+  TY
Sbjct: 744 EEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 803

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
            +L+D  C  G +  AK L++ M+      T  +Y+ L++GY     +    +L+ EM++
Sbjct: 804 TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 863

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM------QRNGVAADTWTYRTFIDGLCK 321
           KGI+PD + +  +         V  A KL DE+       ++G      T      G   
Sbjct: 864 KGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQI 923

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            G + EA E+  ++       +  +   L+DG
Sbjct: 924 AGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 34/281 (12%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            TP+ VT+ +++ G C       A  L  ++ + G  PD F Y  ++N  C+      AL
Sbjct: 692 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKAL 751

Query: 79  NLFEEM--------------ANGNGEFGVVCE--------------PNTVTYTTIIDGLC 110
           +LF+EM                G  + G + E              PN VTYT++ID  C
Sbjct: 752 DLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 811

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G + +AK L L+M+++N+ P   TYTS++ G+    + +E   LF EM+ +G++P+ +
Sbjct: 812 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 871

Query: 171 TFNVIMDELCKNGKMDEASRLLD------LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           T+ V++D  C+ G + EA +L D      + ++ G R    T + +  GF + G ++ A 
Sbjct: 872 TYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAA 931

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           E+  SM   G      S   L++G       E + +L  +M
Sbjct: 932 EVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/456 (32%), Positives = 249/456 (54%), Gaps = 7/456 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V  R++     P   TF++L+        I     L  ++   G  P+++TYT  +  L 
Sbjct: 216 VYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLG 275

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R      A  + + M +        C P+ VTYT +ID LC    +D A  L  +MK  +
Sbjct: 276 RDGKIDEAYRIMKRMDDDG------CGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSS 329

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            KP+ VTY +++  F      ++ ++++ EM   G  P+VVTF ++++ LCK G+++EA 
Sbjct: 330 HKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAF 389

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LLD M + GV P+  TYNTL+ G     R++ A +LF +MES+G + T ++Y +LI+ +
Sbjct: 390 DLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYH 449

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K+     AL  + +M ++GI P++V  N     L E+ ++  A  +F+E++ +G+A D+
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   +    K G + EA++L   +  ++CE D+   NSLID L K+GR+E A ++F  
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCR 569

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    L P VVTY+I++ GL  +GQ+ KA  LF  M  +   PN ITF+ L+    + +E
Sbjct: 570 MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDE 629

Query: 430 PSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEI 464
               +++ +KM  +N  PD  +  +I+   + +N+I
Sbjct: 630 VDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQI 665



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 223/428 (52%), Gaps = 7/428 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+T  I+ L  + +I EA  +  ++   GC PDV TYT L++ LC       A+ L
Sbjct: 262 PNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCL 321

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M + + +      P+ VTY T++D     G +DK +++  +M+     P+VVT+T +
Sbjct: 322 FTKMKSSSHK------PDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTIL 375

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C A   NEA  L   M  QGV PN+ T+N ++  L +  ++D+A  L   M   GV
Sbjct: 376 VNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGV 435

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P A+TY  L+D    +G    A E F  M++ G    + + +  +    +   +  A +
Sbjct: 436 EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKA 495

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +++E+ S G+ PD V +N +     ++ QV+ A KL  EM +     D     + ID L 
Sbjct: 496 MFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLY 555

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + EA ++F  +  +     +  YN L+ GL K G+++ A++LF S+      PN +
Sbjct: 556 KAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTI 615

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++ ++  LC + ++D A  +F  M      P+V+TF+ +I GFI+ N+    I L H+M
Sbjct: 616 TFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675

Query: 441 KEINVMPD 448
           K++ + PD
Sbjct: 676 KKL-LRPD 682



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 235/464 (50%), Gaps = 15/464 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L  + K    PD +   SLI  L    R+ EA  +F ++      P V T
Sbjct: 522 VGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVT 581

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GL +      A+ LFE M NG+G     C PNT+T+ T++D LCK   VD A +
Sbjct: 582 YNILLAGLGKEGQIQKAVQLFESM-NGHG-----CSPNTITFNTLLDCLCKNDEVDLALK 635

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M   N +P+V+T+ ++I GF        A  LF   M + ++P+ VT   ++  + 
Sbjct: 636 MFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF-HQMKKLLRPDHVTLCTLLPGVI 694

Query: 181 KNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           K+G++++A R+  D   Q G   D   +  ++ G  LT        LF   E + C+   
Sbjct: 695 KSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGI-LTEAGTEKAILF--GERLVCRAIC 751

Query: 240 FSYSILI---NGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFK 295
              S+LI      CK+K+   A +++ +   + G+KP + ++N L  G  E+H VE A+ 
Sbjct: 752 KDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWN 811

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           LF+EM+  G A DT+TY + ID   K+G I E  +L+  +    C+ +   YN +I  L 
Sbjct: 812 LFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLV 871

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS RL+ A++L+ +L  G   P   T+  +I GL   G++D A ++F  M      PN  
Sbjct: 872 KSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSA 931

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +++L+ G+ ++       E   +M +  + PD    +I+VD+L
Sbjct: 932 IYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDIL 975



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 225/426 (52%), Gaps = 9/426 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   + ++ R+      PD VT+T LI  LC   ++ +A  LFTK++    +PD  TY
Sbjct: 278 GKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            TL++      H      ++ EM A+G         P+ VT+T +++ LCK G +++A +
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEADGYA-------PDVVTFTILVNALCKAGRINEAFD 390

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M+ + + PN+ TY ++I G   A   ++A  LF  M   GV+P   T+ +++D   
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHG 450

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G   +A    + M   G+ P+    N  L      GR+  AK +F  ++S G      
Sbjct: 451 KSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSV 510

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++++  Y K  +++ A+ L SEM     +PDV++ N+L   L++  +VE A+++F  M
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM 570

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +   +A    TY   + GL K G I +AV+LF ++    C  +   +N+L+D LCK+  +
Sbjct: 571 EEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEV 630

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           ++AL++F  +      P+V+T++ +I G     Q+  A  LF  M++  + P+ +T   L
Sbjct: 631 DLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKK-LLRPDHVTLCTL 689

Query: 421 IRGFIR 426
           + G I+
Sbjct: 690 LPGVIK 695



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 234/484 (48%), Gaps = 44/484 (9%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV   + +  R+ +    P  VT+  L+ GL  E +I +A  LF  +   GC P+  T+
Sbjct: 558  GRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             TL++ LC+     +AL +F +M   N      C P+ +T+ TII G  K+  +  A  L
Sbjct: 618  NTLLDCLCKNDEVDLALKMFYKMTTMN------CRPDVLTFNTIIHGFIKQNQIKNAIWL 671

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL---------------FIEMMDQGVQ 166
              QMK K ++P+ VT  +++ G   +    +A R+               F E +  G+ 
Sbjct: 672  FHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGIL 730

Query: 167  PNVVTFNVIM------------DE---------LCKNGKMDEASRL-LDLMIQHGVRPDA 204
                T   I+            D+         LCK+ K   A  + +    + GV+P  
Sbjct: 731  TEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTL 790

Query: 205  FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
              YN L+DGF     V  A  LF  M+S GC    F+Y+ LI+ + K+ +I     LY E
Sbjct: 791  KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDE 850

Query: 265  MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
            ML++G KP+ + +N +   L + +++++A  L+  +     +    T+   IDGL K+G 
Sbjct: 851  MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910

Query: 325  IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
            + +A E+F  +    C  +   YN L++G  K G ++ A E F+ +    + P++ +Y+I
Sbjct: 911  LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970

Query: 385  MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
            ++  LC  G++D A   F  +++  + P+++ ++++I G  R     + + L H+M+   
Sbjct: 971  LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030

Query: 445  VMPD 448
            ++PD
Sbjct: 1031 IVPD 1034



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 243/527 (46%), Gaps = 67/527 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++  F +L  + K    P+  T+ +LI GL   +R+ +A  LF+ +   G EP  +TY
Sbjct: 383 GRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTY 442

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCE------------------------ 96
             L++   ++ H   AL  FE+M A G     V C                         
Sbjct: 443 ILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKS 502

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P++VTY  ++    K G VD+A +LL +M     +P+V+   S+I     A    E
Sbjct: 503 SGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEE 562

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A ++F  M +  + P VVT+N+++  L K G++ +A +L + M  HG  P+  T+NTLLD
Sbjct: 563 AWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLD 622

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C    V+ A ++F  M +M C+  V +++ +I+G+ K  +I+ A+ L+ +M  K ++P
Sbjct: 623 CLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRP 681

Query: 273 DVVIHNTLFVGLFEIHQVERAFKL---------------FDEMQRNGVAADTWTYRTFID 317
           D V   TL  G+ +  Q+E AF++               F E    G+  +  T +  + 
Sbjct: 682 DHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILF 741

Query: 318 G---------------------LCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLC 355
           G                     LCK+     A  +F    + L  +  ++ YN LIDG  
Sbjct: 742 GERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFL 801

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +   +E+A  LF  +      P+  TY+ +I      G++++  DL+ +M      PN I
Sbjct: 802 EVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTI 861

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T++M+I   ++ N   K ++L + +   +  P       ++D L K+
Sbjct: 862 TYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKS 908



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 189/372 (50%), Gaps = 7/372 (1%)

Query: 13   RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRT 71
            R++      D      +IK LC   +   A  +F K  +  G +P +  Y  L++G    
Sbjct: 744  RLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEV 803

Query: 72   SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
             +  VA NLFEEM +        C P+T TY ++ID   K G +++  +L  +M  +  K
Sbjct: 804  HNVEVAWNLFEEMKSAG------CAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCK 857

Query: 132  PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
            PN +TY  VI     +   ++A  L+  ++     P   TF  ++D L K+G++D+A  +
Sbjct: 858  PNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEM 917

Query: 192  LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
             D M+ +G RP++  YN L++G+   G V+ A E F  M   G +  + SY+IL++  C 
Sbjct: 918  FDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCI 977

Query: 252  NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
               ++ AL  + ++   G+ PD+V +N +  GL    + E A  LF EMQ  G+  D +T
Sbjct: 978  AGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYT 1037

Query: 312  YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
            Y + I  L   G I EA +++  L+ +  + ++  YN+LI G   SG  E+A  +++ + 
Sbjct: 1038 YNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMM 1097

Query: 372  CGVLVPNVVTYS 383
             G   PN  T++
Sbjct: 1098 VGGCDPNTGTFA 1109



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 221/459 (48%), Gaps = 47/459 (10%)

Query: 20   TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            +P+ +TF +L+  LC    +  A  +F K+    C PDV T+ T+++G  + +    A+ 
Sbjct: 611  SPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIW 670

Query: 80   LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA----KELLLQMK---DKNIKP 132
            LF +M         +  P+ VT  T++ G+ K G ++ A    ++   Q+    D++   
Sbjct: 671  LFHQMKK-------LLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWE 723

Query: 133  NVV-----------------------------TYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
            +V+                                 +I+  C  K  + A+ +F++   +
Sbjct: 724  DVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKE 783

Query: 164  -GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
             GV+P +  +N+++D   +   ++ A  L + M   G  PD FTYN+L+D    +G++N 
Sbjct: 784  LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843

Query: 223  AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
              +L+  M + GCK    +Y+++I+   K+  ++ A+ LY  ++S    P       L  
Sbjct: 844  LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLID 903

Query: 283  GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
            GL +  +++ A ++FD M   G   ++  Y   ++G  K G++  A E F  +       
Sbjct: 904  GLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRP 963

Query: 343  DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
            D+++Y  L+D LC +GR++ AL  F  L    L P++V Y++MI GL    + ++A  LF
Sbjct: 964  DLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLF 1023

Query: 403  LDMEENAVVPNVITFDMLI--RGFI-RINEPSKVIELLH 438
             +M+   +VP++ T++ LI   G +  I E  K+ E L 
Sbjct: 1024 HEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQ 1062



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 213/436 (48%), Gaps = 34/436 (7%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD +TF ++I G   +++I  A  LF +++     PD  T  TL+ G+ ++     A  +
Sbjct: 647  PDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRI 705

Query: 81   FEEMANGNGE-------------------------FG------VVCEPNTVTYTTIIDGL 109
             E+     G                          FG       +C+ ++V    II  L
Sbjct: 706  TEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVL-IPIIKVL 764

Query: 110  CKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            CK      A+ + ++  K+  +KP +  Y  +I GF    +   A  LF EM   G  P+
Sbjct: 765  CKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPD 824

Query: 169  VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
              T+N ++D   K+GK++E   L D M+  G +P+  TYN ++     + R++ A +L+ 
Sbjct: 825  TFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYY 884

Query: 229  SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            ++ S     T  ++  LI+G  K+  ++ A  ++  M+  G +P+  I+N L  G  ++ 
Sbjct: 885  NLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLG 944

Query: 289  QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
             V+ A + F  M + G+  D  +Y   +D LC  G + +A+  F  L+    + D+ AYN
Sbjct: 945  HVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYN 1004

Query: 349  SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
             +I+GL +S R E AL LF  +    +VP++ TY+ +I  L   G +++A  ++ +++  
Sbjct: 1005 LMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFI 1064

Query: 409  AVVPNVITFDMLIRGF 424
             + PNV T++ LIRG+
Sbjct: 1065 GLKPNVFTYNALIRGY 1080



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 178/357 (49%), Gaps = 5/357 (1%)

Query: 64   LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
            ++  LC+   T VA N+F +      E GV  +P    Y  +IDG  +   V+ A  L  
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTK---ELGV--KPTLKVYNLLIDGFLEVHNVEVAWNLFE 814

Query: 124  QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            +MK     P+  TY S+I     +   NE   L+ EM+ +G +PN +T+N+++  L K+ 
Sbjct: 815  EMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSN 874

Query: 184  KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            ++D+A  L   ++     P   T+  L+DG   +GR++ A E+F  M   GC+     Y+
Sbjct: 875  RLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYN 934

Query: 244  ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            IL+NGY K   ++ A   +  M+ +GI+PD+  +  L   L    +V+ A   F+++++ 
Sbjct: 935  ILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQA 994

Query: 304  GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
            G+  D   Y   I+GL ++    EA+ LFH ++      D+  YNSLI  L   G +E A
Sbjct: 995  GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054

Query: 364  LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             +++  L    L PNV TY+ +I G    G  + A  ++  M      PN  TF  L
Sbjct: 1055 GKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 200/404 (49%), Gaps = 45/404 (11%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR-----GFCYAKDWNE 152
           N  TY  I   L   G + +A   L +M++     N  +Y  +I      GFC      E
Sbjct: 158 NVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFC-----KE 212

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  ++  M+ +G++P++ TF+ +M    K   +     LL+ M   G+RP+ +TY   + 
Sbjct: 213 ALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIR 272

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
                G+++ A  +   M+  GC   V +Y++LI+  C  ++++ A+ L+++M S   KP
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D V + TL     +   +++  K++ EM+ +G A D  T+   ++ LCK G I EA +L 
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC-GV----------------- 374
            T+R      ++  YN+LI GL ++ RL+ AL+LF ++   GV                 
Sbjct: 393 DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKS 452

Query: 375 -----------------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
                            + PN+V  +  +  L   G++ +A+ +F +++ + + P+ +T+
Sbjct: 453 GHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTY 512

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +M+++ + ++ +  + I+LL +M ++   PD  +++ ++D L K
Sbjct: 513 NMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYK 556



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 158/317 (49%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F  M  Q ++ NV T+ +I   L   G + +A   L+ M + G   +A++YN L+    
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLL 205

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            +G    A E++  M S G K ++ ++S L+    K + I+  + L  EM S G++P++ 
Sbjct: 206 QSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIY 265

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +      L    +++ A+++   M  +G   D  TY   ID LC    + +A+ LF  +
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM 325

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +    + D   Y +L+D     G L+   +++  +      P+VVT++I++  LC  G++
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           ++A DL   M +  V+PN+ T++ LI G +R N     ++L   M+ + V P A    ++
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILL 445

Query: 456 VDLLAKNEISLNSLPSF 472
           +D   K+     +L +F
Sbjct: 446 IDYHGKSGHPGKALETF 462



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 6/229 (2%)

Query: 19   FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            F+P   TF  LI GL    R+ +A  +F  +  +GC P+   Y  LVNG  +  H   A 
Sbjct: 891  FSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTAC 950

Query: 79   NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
              F+ M            P+  +YT ++D LC  G VD A     ++K   + P++V Y 
Sbjct: 951  EFFKRMVKEG------IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYN 1004

Query: 139  SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
             +I G   ++   EA  LF EM ++G+ P++ T+N ++  L   G ++EA ++ + +   
Sbjct: 1005 LMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFI 1064

Query: 199  GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
            G++P+ FTYN L+ G+ L+G    A  ++  M   GC     +++ L N
Sbjct: 1065 GLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 6/172 (3%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +G V        R++K    PD  ++T L+  LC   R+ +A   F KL+  G +PD+  
Sbjct: 943  LGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVA 1002

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y  ++NGL R+  T  AL+LF EM N     G+V  P+  TY ++I  L   G +++A +
Sbjct: 1003 YNLMINGLGRSQRTEEALSLFHEMQNR----GIV--PDLYTYNSLILNLGIVGMIEEAGK 1056

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
            +  +++   +KPNV TY ++IRG+  + +   A  ++ +MM  G  PN  TF
Sbjct: 1057 IYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 225/422 (53%), Gaps = 12/422 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V++ +++KGLC   R  +   L  ++    C P++ T+ TL+  LCR         LF
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG-------LF 267

Query: 82  E---EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           E   E+     E G  C P+   Y TIIDG+CKEG ++ A E+L +M    +KPNVV Y 
Sbjct: 268 ERVHEVLAQMSEHG--CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +V++G C A+ W EA+ L  EM  +    + VTFN+++D  C+NG +D    LL+ M+ H
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  PD  TY T+++GFC  G ++ A  L  SM S GCK    SY+I++ G C       A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L S+M+ +G  P+ V  NTL   L +   VE+A +L  +M  NG + D  +Y T IDG
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L K G   EA+EL + +       +   Y+S+   L + GR+   +++F ++    +  +
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ +I  LC   + D+A D F  M  N  +PN  T+ MLI+G        +  ELL 
Sbjct: 566 AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625

Query: 439 KM 440
           ++
Sbjct: 626 EL 627



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 230/466 (49%), Gaps = 12/466 (2%)

Query: 5   SHGFVVLGRIL-----KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           S GF    R+L     K C T D      ++  +C +  + EA  L  KL  FGCE D+ 
Sbjct: 159 SGGFRNSVRVLEAMHAKGC-TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIV 217

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y  ++ GLC          L +EM        V C PN VT+ T+I  LC+ G  ++  
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+L QM +    P++  Y ++I G C       A  +   M   G++PNVV +N ++  L
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C   +  EA  LL  M Q     D  T+N L+D FC  G V+   EL   M S GC   V
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +ING+CK   I+ A+ L   M S G KP+ V +  +  GL    +   A +L  +
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M + G   +  T+ T I+ LCK G + +A+EL   + +  C  D+ +Y+++IDGL K+G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E ALEL   +    + PN + YS +   L  +G+++K   +F ++++  +  + + ++ 
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           +I    +  E  + I+    M     MP+ S  ++++  LA   ++
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 223/442 (50%), Gaps = 8/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A TF  +++GLC   RI +A  +  ++   GC P    Y  ++   CR+     ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            E M A G       C  +T     +++ +C++G VD+A  LL ++     + ++V+Y +
Sbjct: 169 LEAMHAKG-------CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C AK W + + L  EM+     PN+VTFN ++  LC+NG  +    +L  M +HG
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   Y T++DG C  G +  A E+   M S G K  V  Y+ ++ G C  +  + A 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L SEM  K    D V  N L     +   V+R  +L ++M  +G   D  TY T I+G 
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I EAV L  ++    C+ +  +Y  ++ GLC +GR   A EL   +      PN 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++ +I  LC  G +++A +L   M  N   P++I++  +I G  +  +  + +ELL+ 
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M    + P+  I S +   L++
Sbjct: 522 MVNKGISPNTIIYSSIACALSR 543



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 6/386 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ VTF +LI  LC          +  ++   GC PD+  Y T+++G+C+  H  VA  
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +   M +    +G+  +PN V Y T++ GLC      +A+ELL +M  K+   + VT+  
Sbjct: 308 ILNRMPS----YGL--KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++  FC     +    L  +M+  G  P+V+T+  +++  CK G +DEA  LL  M   G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +P+  +Y  +L G C  GR   A+EL   M   GC     +++ LIN  CK   +E A+
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  +ML  G  PD++ ++T+  GL +  + E A +L + M   G++ +T  Y +    L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G + + +++F  ++      D   YN++I  LCK    + A++ F  +     +PN 
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDM 405
            TY+++I GL ++G   +A++L  ++
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 181/361 (50%), Gaps = 6/361 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL ++ +   TPD   + ++I G+C E  +  A  +  ++  +G +P+V  Y T++ GLC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  A  L  EM      F   C  + VT+  ++D  C+ G VD+  ELL QM    
Sbjct: 333 SAERWKEAEELLSEM------FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+V+TYT+VI GFC     +EA  L   M   G +PN V++ +++  LC  G+  +A 
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L+  MIQ G  P+  T+NTL++  C  G V  A EL   M   GC   + SYS +I+G 
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  + E AL L + M++KGI P+ +I++++   L    +V +  ++FD ++   + +D 
Sbjct: 507 GKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   I  LCK      A++ F  +    C  +   Y  LI GL   G  + A EL   
Sbjct: 567 VLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626

Query: 370 L 370
           L
Sbjct: 627 L 627



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 144/284 (50%), Gaps = 6/284 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VTF  L+   C    +     L  ++   GC PDV TYTT++NG C+      A+ L 
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + M++        C+PNTV+YT ++ GLC  G    A+EL+ QM  +   PN VT+ ++I
Sbjct: 415 KSMSSCG------CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C      +A  L  +M+  G  P++++++ ++D L K GK +EA  LL++M+  G+ 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+   Y+++       GRVN   ++F +++    +     Y+ +I+  CK  E + A+  
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++ M+S G  P+   +  L  GL      + A +L  E+   G 
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L ++L     PD +T+T++I G C E  I EA  L   +   GC+P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++ GLC     + A  L  +M          C PN VT+ T+I+ LCK+G V++A EL
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQG------CPPNPVTFNTLINFLCKKGLVEQAIEL 483

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM      P++++Y++VI G   A    EA  L   M+++G+ PN + ++ I   L +
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++++  ++ D +    +R DA  YN ++   C     + A + F  M S GC     +
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKG 269
           Y++LI G       + A  L SE+ S+G
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 164/357 (45%), Gaps = 3/357 (0%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           V Y  ++ G C+ G   +            + PN  T+  V+RG C      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M  +G  P    ++VI++  C++G    + R+L+ M   G   D    N +L+  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           V+ A  L   +   GC+  + SY+ ++ G C  K       L  EM+     P++V  NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L      ER  ++  +M  +G   D   Y T IDG+CK G++  A E+ + +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + ++  YN+++ GLC + R + A EL   +       + VT++I++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +L   M  +  +P+VIT+  +I GF +     + + LL  M      P+    +IV+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 136/294 (46%), Gaps = 3/294 (1%)

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           VV +N ++   C+ G++  A RL   +    V P+A+T+  ++ G C  GR+  A E+  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   GC      Y +++   C++     ++ +   M +KG   D    N +   + E  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            V+ A  L  ++   G  AD  +Y   + GLC      +  EL   +  + C  +I  +N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +LI  LC++G  E   E+   +      P++  Y+ +I G+C +G ++ A ++   M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + PNV+ ++ +++G        +  ELL +M + +   D    +I+VD   +N
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 3/258 (1%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            YN ++ G+C  G++  A+ L  ++      +T F    ++ G C    I  AL +  EM
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFP---VVRGLCTRGRIADALEVLDEM 137

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             KG  P   +++ +            + ++ + M   G   DT      ++ +C+ G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EAV L   L    CE DI +YN+++ GLC + R     EL   +      PN+VT++ +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           IG LC +G  ++  ++   M E+   P++  +  +I G  +        E+L++M    +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 446 MPDASIVSIVVDLLAKNE 463
            P+    + V+  L   E
Sbjct: 318 KPNVVCYNTVLKGLCSAE 335


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/392 (36%), Positives = 219/392 (55%), Gaps = 6/392 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + D  +FT LI   C  SR+  A ++  K+   G EP + T+ +L++G C  +    A +
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M           EPN V Y T+IDGLCK G ++ A ELL +M+ K +  +VVTY +
Sbjct: 163 LVILMVKSG------YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G CY+  W++A R+  +MM + + P+VVTF  ++D   K G +DEA  L   MIQ  
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V P+  TYN++++G C+ GR+  AK+ F  M S GC   V +Y+ LI+G+CK + ++  +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  M  +G   D+  +NTL  G  ++ ++  A  +F  M    V  D  T+   + GL
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C NG I  A+  F  +R  +    I AYN +I GLCK+ ++E A ELF  LP   + P+ 
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            TY+IMI GLC +G   +A +L   M+E  ++
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/403 (35%), Positives = 223/403 (55%), Gaps = 6/403 (1%)

Query: 20   TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            + D  +FT LI   C  SR+  A AL  K+   G  P + T  +L+NG C+ +    A++
Sbjct: 636  SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 695

Query: 80   LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            L + M      FG V  PN V Y T+I+GLCK   ++ A E+   M+ K I+ + VTY +
Sbjct: 696  LVDSMDG----FGFV--PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 749

Query: 140  VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            +I G   +  W +A RL  +M+ + + PNV+ F  ++D   K G + EA  L   MI+  
Sbjct: 750  LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 809

Query: 200  VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            V P+ FTYN+L++GFC+ G +  AK +F  M S GC   V +Y+ LI G+CK+K +E  +
Sbjct: 810  VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 869

Query: 260  SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             L+ EM  +G+  D   +NTL  G  +  ++  A K+F+ M   GV+ D  TY   +D L
Sbjct: 870  KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 929

Query: 320  CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            C NG I +A+ +   L+  + + DI  YN +I GLC++ +L+ A  LFRSL    + P+ 
Sbjct: 930  CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 989

Query: 380  VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            + Y  MI GLC  G   +A  L   M+E+  +P+   +D  +R
Sbjct: 990  IAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 227/445 (51%), Gaps = 6/445 (1%)

Query: 7    GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
             F +   +L+S   P  V FT ++  +   ++      L+ K+   G   D++++T L++
Sbjct: 588  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647

Query: 67   GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
              CR S   +AL L  +M     + G    P+ VT  ++++G C+     +A  L+  M 
Sbjct: 648  CFCRCSRLSLALALLGKMM----KLGF--RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701

Query: 127  DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
                 PNVV Y +VI G C  +D N A  +F  M  +G++ + VT+N ++  L  +G+  
Sbjct: 702  GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 761

Query: 187  EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            +A+RLL  M++  + P+   +  L+D F   G +  A+ L+  M        VF+Y+ LI
Sbjct: 762  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 821

Query: 247  NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            NG+C +  +  A  ++  M+SKG  PDVV +NTL  G  +  +VE   KLF EM   G+ 
Sbjct: 822  NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 881

Query: 307  ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
             D +TY T I G C+ G +  A ++F+ +       DI  YN L+D LC +G++E AL +
Sbjct: 882  GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 941

Query: 367  FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
               L    +  +++TY+I+I GLC   ++ +A  LF  +    V P+ I +  +I G  R
Sbjct: 942  VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1001

Query: 427  INEPSKVIELLHKMKEINVMPDASI 451
                 +  +L  +MKE   MP   I
Sbjct: 1002 KGLQREADKLCRRMKEDGFMPSERI 1026



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 197/371 (53%), Gaps = 6/371 (1%)

Query: 12   GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
            G+++K  F P  VT  SL+ G C  +R  EA +L   +  FG  P+V  Y T++NGLC+ 
Sbjct: 663  GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 722

Query: 72   SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                 AL +F  M       G+    + VTY T+I GL   G    A  LL  M  + I 
Sbjct: 723  RDLNNALEVFYCMEKK----GI--RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID 776

Query: 132  PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
            PNV+ +T++I  F    +  EA+ L+ EM+ + V PNV T+N +++  C +G + +A  +
Sbjct: 777  PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 836

Query: 192  LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
             DLM+  G  PD  TYNTL+ GFC + RV    +LF  M   G     F+Y+ LI+GYC+
Sbjct: 837  FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 896

Query: 252  NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              ++  A  +++ M+  G+ PD+V +N L   L    ++E+A  + +++Q++ +  D  T
Sbjct: 897  AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 956

Query: 312  YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
            Y   I GLC+   + EA  LF +L     + D  AY ++I GLC+ G    A +L R + 
Sbjct: 957  YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 1016

Query: 372  CGVLVPNVVTY 382
                +P+   Y
Sbjct: 1017 EDGFMPSERIY 1027



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 224/441 (50%), Gaps = 8/441 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFT-KLRVFGCEPDVFTY 61
           R    F +   ++ S   P  V FT L+    A  R  E    F+ K+ ++G   D++++
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTAT-ANLRRYETVIYFSQKMELYGISHDLYSF 109

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++  CR S    AL++  +M     + G   EP+ VT+ +++ G C    +  A  L
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMM----KLGY--EPSIVTFGSLLHGFCLVNRIGDAFSL 163

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           ++ M     +PNVV Y ++I G C   + N A  L  EM  +G+  +VVT+N ++  LC 
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+  +A+R+L  M++  + PD  T+  L+D F   G ++ A+EL+  M          +
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +ING C +  +  A   +  M SKG  P+VV +NTL  G  +   V+   KLF  M 
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G  AD +TY T I G C+ G +  A+++F  +   +   DI  +  L+ GLC +G +E
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL  F  +        +V Y+IMI GLC   +++KA +LF  +    V P+  T+ ++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 422 RGFIRINEPSKVIELLHKMKE 442
            G  +     +  EL+ +MKE
Sbjct: 464 LGLCKNGPRREADELIRRMKE 484



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 240/518 (46%), Gaps = 69/518 (13%)

Query: 2   GRVSHGFVVLGRI----------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV 51
           G + HGF ++ RI          +KS + P+ V + +LI GLC    +  A  L  ++  
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
            G   DV TY TL+ GLC +     A  +  +M   +        P+ VT+T +ID   K
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS------INPDVVTFTALIDVFVK 258

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
           +G +D+A+EL  +M   ++ PN VTY S+I G C      +AK+ F  M  +G  PNVVT
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +N ++   CK   +DE  +L   M   G   D FTYNTL+ G+C  G++  A ++F  M 
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           S      + ++ IL++G C N EIE AL  + +M        +V +N +  GL +  +VE
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           +A++LF  +   GV  D  TY   I GLCKNG   EA EL   +R +K E  I   N+  
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL---IRRMKEEGIICQMNAED 495

Query: 352 DGL--CKSGRLEIALEL------FRSLPCGV--LVPNVVTYSIMIGGLCNDG-------- 393
           D L    S   EI+L L       +S P  +  L+P  + +S  + G             
Sbjct: 496 DHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIP--IAFSSSVKGFVRRHYLLLERGN 553

Query: 394 ------------------------------QMDKARDLFLDMEENAVVPNVITFDMLIRG 423
                                         + D A  LF +M ++  +P+++ F  ++  
Sbjct: 554 NPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTV 613

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             ++N+   VI L HKM+ + +  D    +I++    +
Sbjct: 614 IAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCR 651



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 210/472 (44%), Gaps = 55/472 (11%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           V +  +I GLC   ++ +A  LF +L V G +PD  TYT ++ GLC+      A  L   
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV--------V 135
           M     E G++C+ N        D L +    +K   L L+   +  K N         +
Sbjct: 482 MK----EEGIICQMNAED-----DHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPI 532

Query: 136 TYTSVIRGFC--------------------------------------YAKDWNEAKRLF 157
            ++S ++GF                                       +   +++A  LF
Sbjct: 533 AFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLF 592

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM+     P++V F  ++  + K  K D    L   M   G+  D +++  L+  FC  
Sbjct: 593 CEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRC 652

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
            R++ A  L   M  +G + ++ +   L+NG+C+    + A+SL   M   G  P+VVI+
Sbjct: 653 SRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 712

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           NT+  GL +   +  A ++F  M++ G+ AD  TY T I GL  +G   +A  L   +  
Sbjct: 713 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 772

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
            K + ++  + +LID   K G L  A  L++ +    +VPNV TY+ +I G C  G +  
Sbjct: 773 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 832

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           A+ +F  M      P+V+T++ LI GF +       ++L  +M    ++ DA
Sbjct: 833 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 884



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 173/365 (47%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           + A  L  +M      P++V +T ++      + +        +M   G+  ++ +F ++
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +   C+  ++  A  +L  M++ G  P   T+ +LL GFCL  R+  A  L + M   G 
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V  Y+ LI+G CKN E+  AL L +EM  KG+  DVV +NTL  GL    +   A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +  +M +  +  D  T+   ID   K G + EA EL+  +     + +   YNS+I+GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             GRL  A + F  +      PNVVTY+ +I G C    +D+   LF  M       ++ 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
           T++ LI G+ ++ +    +++   M    V PD     I++  L  N    ++L  F   
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 476 EQQEE 480
            + E+
Sbjct: 413 RESEK 417



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 171/347 (49%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  L  +M      P++V +T V+        ++    L+ +M + G+  ++ +F ++
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +   C+  ++  A  LL  M++ G RP   T  +LL+GFC   R   A  L  SM+  G 
Sbjct: 646 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V  Y+ +ING CKN+++  AL ++  M  KGI+ D V +NTL  GL    +   A +
Sbjct: 706 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M +  +  +   +   ID   K G ++EA  L+  +       ++  YNSLI+G C
Sbjct: 766 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             G L  A  +F  +      P+VVTY+ +I G C   +++    LF +M    +V +  
Sbjct: 826 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 885

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T++ LI G+ +  + +   ++ ++M +  V PD    +I++D L  N
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 932



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 144/277 (51%), Gaps = 6/277 (2%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GR +    +L  ++K    P+ + FT+LI     E  ++EA  L+ ++      P+VFTY
Sbjct: 758  GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 817

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +L+NG C       A  +F+ M +        C P+ VTY T+I G CK   V+   +L
Sbjct: 818  NSLINGFCIHGCLGDAKYMFDLMVSKG------CFPDVVTYNTLITGFCKSKRVEDGMKL 871

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +M  + +  +  TY ++I G+C A   N A+++F  M+D GV P++VT+N+++D LC 
Sbjct: 872  FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 931

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            NGK+++A  +++ + +  +  D  TYN ++ G C T ++  A  LF S+   G K    +
Sbjct: 932  NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 991

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            Y  +I+G C+      A  L   M   G  P   I++
Sbjct: 992  YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 222/522 (42%), Gaps = 53/522 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +L  ++K    PD VTFT+LI     +  + EA  L+ ++     +P+  TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++NGLC       A   F+ MA+        C PN VTY T+I G CK   VD+  +L
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKG------CFPNVVTYNTLISGFCKFRMVDEGMKL 338

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  +    ++ TY ++I G+C       A  +F  M+ + V P+++T  +++  LC 
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG+++ A    D M +         YN ++ G C   +V  A ELF  +   G K    +
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGI-----------KPDVVIHNTLFVGLFEIHQV 290
           Y+I+I G CKN     A  L   M  +GI           +     +  + + L EI + 
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWER 518

Query: 291 ERAFKLFDEMQR----------------------NGVAADTWTYRTFIDGLCKNGYIVEA 328
            ++   +  MQR                       G   +T   R+F      + Y    
Sbjct: 519 SKSNPFW--MQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERL 576

Query: 329 VELFHTLRI-----LKCE-FDIRAYNSLIDG------LCKSGRLEIALELFRSLPCGVLV 376
               H ++      L CE    R   S++D       + K  + +I + L+  +    + 
Sbjct: 577 RNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGIS 636

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            ++ +++I+I   C   ++  A  L   M +    P+++T   L+ GF + N   + + L
Sbjct: 637 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL 696

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           +  M     +P+  I + V++ L KN    N+L  F   E++
Sbjct: 697 VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 738



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/491 (23%), Positives = 212/491 (43%), Gaps = 54/491 (10%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K CF P+ VT+ +LI G C    + E   LF ++   G   D+FTY TL++G C+     
Sbjct: 310 KGCF-PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           VAL++F  M +          P+ +T+  ++ GLC  G ++ A      M++      +V
Sbjct: 369 VALDIFCWMVSRR------VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG---KMDEASRLL 192
            Y  +I G C A    +A  LF  +  +GV+P+  T+ +++  LCKNG   + DE  R +
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482

Query: 193 -------------DLMIQHGV------------------------RPDAFTYNTLLDGFC 215
                        D + +H                          R     +++ + GF 
Sbjct: 483 KEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFV 542

Query: 216 -----LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
                L  R N+ +       S    H  +   +    +C   + + A SL+ EML    
Sbjct: 543 RRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCI--KFDDAFSLFCEMLQSRP 600

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P +V    +   + ++++ +    L+ +M+  G++ D +++   I   C+   +  A+ 
Sbjct: 601 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 660

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +  L     I    SL++G C+  R + A+ L  S+     VPNVV Y+ +I GLC
Sbjct: 661 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 720

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            +  ++ A ++F  ME+  +  + +T++ LI G       +    LL  M +  + P+  
Sbjct: 721 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 780

Query: 451 IVSIVVDLLAK 461
             + ++D   K
Sbjct: 781 FFTALIDTFVK 791



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L  G+  +   E A +L+ EM+     P +V    L      + + E       +M+  G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           ++ D +++   I   C+   +  A+ +   +  L  E  I  + SL+ G C   R+  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            L   +      PNVV Y+ +I GLC +G+++ A +L  +ME+  +  +V+T++ L+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDES 484
                 S    +L  M + ++ PD    + ++D+  K + +L+          Q  VD +
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK-QGNLDEAQELYKEMIQSSVDPN 280

Query: 485 NV 486
           NV
Sbjct: 281 NV 282



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 6/141 (4%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G+++    V  R++    +PD VT+  L+  LC   +I +A  +   L+    + D+ TY
Sbjct: 898  GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 957

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              ++ GLCRT     A  LF  +       GV  +P+ + Y T+I GLC++G   +A +L
Sbjct: 958  NIIIQGLCRTDKLKEAWCLFRSLTRK----GV--KPDAIAYITMISGLCRKGLQREADKL 1011

Query: 122  LLQMKDKNIKPNVVTYTSVIR 142
              +MK+    P+   Y   +R
Sbjct: 1012 CRRMKEDGFMPSERIYDETLR 1032


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/432 (32%), Positives = 232/432 (53%), Gaps = 11/432 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I KSC  PDA TF  L++GLC  +++ +A  L  +++  GC PD   Y  L++G  +   
Sbjct: 2   IDKSC-QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A     EM   +      C P  VTYT I+DGLCK G    A +LL +M+DK   PN
Sbjct: 61  FGQAFKFLAEMVKNH------CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPN 114

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           + TY  ++ G C  +  +EAK++  EM  +G  P+VVT+N  +  LCK  ++DEA + L 
Sbjct: 115 IYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLA 174

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M    V PD  +Y T+++G C +G ++ A  +   M + GC   V +YS LI+G+CK  
Sbjct: 175 RM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGG 231

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           E+E A+ L   ML  G +P++V +N+L   L  +  + +A  +  EM+R G   D  +Y 
Sbjct: 232 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 291

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             IDGLCK   + +A  +F  +    C  +  +Y+ L++ LCK   L+ A+ L       
Sbjct: 292 ACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREK 351

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLD-MEENAVVPNVITFDMLIRGFIRINEPSK 432
             + +++ Y++++ GLC  G+ D+A  LF   ++E    P+V  +++++    +  +  K
Sbjct: 352 YQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 411

Query: 433 VIELLHKMKEIN 444
            +++  +M E N
Sbjct: 412 ALQIHKQMLERN 423



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 250/473 (52%), Gaps = 17/473 (3%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
              F  L  ++K+   P  VT+T+++ GLC   R  +A  L  ++R  GC P+++TY  +
Sbjct: 62  GQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVI 121

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V GLC       A  + EEMA   G F     P+ VTY + I GLCK   VD+A++ L +
Sbjct: 122 VEGLCEERKLDEAKKMLEEMAV-RGYF-----PDVVTYNSFIKGLCKCDRVDEARKFLAR 175

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M    + P+VV+YT+VI G C + D + A R+  +M ++G  P+VVT++ ++D  CK G+
Sbjct: 176 MP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGE 232

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           ++ A  LLD M++ G RP+   YN+LL      G +  A+++ V ME  G    V SY+ 
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
            I+G CK + ++ A +++  M+ +G  P+   ++ L   L +  +++ A  L ++ +   
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKY 352

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGRLEIA 363
              D   Y   +DGLCK G   EA  LF  +   K CE D+  YN ++D  CK  +++ A
Sbjct: 353 QIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 412

Query: 364 LELFRSL---PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           L++ + +    C     NVVT++I++ GLC D ++  A  + L M +   +P+ +T+  L
Sbjct: 413 LQIHKQMLERNC----CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 468

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           +    +  + +  +EL  +  +   +PD    S ++  L    ++  +   FT
Sbjct: 469 VDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFT 521



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 219/440 (49%), Gaps = 11/440 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +L  +     +P+  T+  +++GLC E ++ EA  +  ++ V G  PDV TY
Sbjct: 94  GRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 153

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            + + GLC+      A      M            P+ V+YTT+I+GLCK G +D A  +
Sbjct: 154 NSFIKGLCKCDRVDEARKFLARMP---------VTPDVVSYTTVINGLCKSGDLDSASRM 204

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM ++   P+VVTY+S+I GFC   +   A  L   M+  G +PN+V +N ++  L +
Sbjct: 205 LDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 264

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A  +L  M + G  PD  +YN  +DG C   RV  AK +F  M   GC     S
Sbjct: 265 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 324

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS+L+   CK KE++ A++L  +   K    D++++  L  GL +  + + A  LF ++ 
Sbjct: 325 YSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVL 384

Query: 302 RNGVA-ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              +   D + Y   +D  CK   I +A+++   +    C  ++  +N L+ GLC   RL
Sbjct: 385 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRL 443

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  +  ++     +P+ VTY  ++  +C  G+   A +LF +  +   VP+V+T+  L
Sbjct: 444 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 503

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I G +  N   +   L  K+
Sbjct: 504 ITGLVHENMAEEAYLLFTKL 523



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 195/368 (52%), Gaps = 3/368 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C+P+  T+  ++ GLC+   ++KA++LL +MK+    P+   Y ++I G+  AKD+ +A 
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +   EM+     P VVT+  I+D LCK G+  +A +LLD M   G  P+ +TYN +++G 
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   +++ AK++   M   G    V +Y+  I G CK   ++ A    + M    + PDV
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDV 182

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V + T+  GL +   ++ A ++ D+M   G   D  TY + IDG CK G +  A+ L  +
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +  L C  ++ AYNSL+  L + G +  A ++   +      P+VV+Y+  I GLC   +
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           + KA+ +F  M E    PN  ++ ML+    +  E    I L+ + +E   + D  + ++
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362

Query: 455 VVDLLAKN 462
           ++D L K 
Sbjct: 363 LLDGLCKG 370



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 176/339 (51%), Gaps = 3/339 (0%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M DK+ +P+  T+  ++RG C +    +A++L   M + G  P+   +N ++    K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
             +A + L  M+++   P   TY  ++DG C  GR   A +L   M   GC   +++Y++
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           ++ G C+ ++++ A  +  EM  +G  PDVV +N+   GL +  +V+ A K    + R  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMP 177

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           V  D  +Y T I+GLCK+G +  A  +   +    C  D+  Y+SLIDG CK G +E A+
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            L  S+      PN+V Y+ ++G L   G + KA D+ ++ME     P+V++++  I G 
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +     K   +  +M E    P+AS  S++V+ L K +
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKK 336



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 189/374 (50%), Gaps = 20/374 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +L  + +  FTPD V++ + I GLC   R+ +A A+F ++   GC P+  +
Sbjct: 265 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 324

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ LV  LC+      A+ L E+      ++ +V   + + YT ++DGLCK G  D+A  
Sbjct: 325 YSMLVEELCKKKELDDAITLVEQ---AREKYQIV---DILLYTVLLDGLCKGGRFDEACA 378

Query: 121 LLLQMKDKNI-KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L  ++ D+ I +P+V  Y  ++   C  +  ++A ++  +M+++    NVVT+N+++  L
Sbjct: 379 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGL 437

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C + ++ +A  +L  M+  G  PD  TY TL+D  C  G+   A ELF      GC   V
Sbjct: 438 CVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDV 497

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +YS LI G       E A  L++++       DV + N + +G  E    +   KLF E
Sbjct: 498 VTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVE 550

Query: 300 MQRNGVAADTWTYRTFIDG-LCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCK 356
           +  + V  +  T+   I G L K   + +A  LF   R +K  F  D+   N+LID   K
Sbjct: 551 LIESDVEPNARTFGKEISGKLVKAESLGKARGLFD--RAVKGGFFPDLFVANTLIDVFAK 608

Query: 357 SGRLEIALELFRSL 370
            G LE A  +F S+
Sbjct: 609 CGDLEEARRIFYSM 622


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 225/422 (53%), Gaps = 12/422 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V++ +++KGLC   R  +   L  ++    C P++ T+ TL+  LCR         LF
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG-------LF 267

Query: 82  E---EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           E   E+     E G  C P+   Y TIIDG+CKEG ++ A E+L +M    +KPNVV Y 
Sbjct: 268 ERVHEVLAQMSEHG--CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +V++G C A+ W EA+ L  EM  +    + VTFN+++D  C+NG +D    LL+ M+ H
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  PD  TY T+++GFC  G ++ A  L  SM S GCK    SY+I++ G C       A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L S+M+ +G  P+ V  NTL   L +   VE+A +L  +M  NG + D  +Y T IDG
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L K G   EA+EL + +       +   Y+S+   L + GR+   +++F ++    +  +
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ +I  LC   + D+A D F  M  N  +PN  T+ MLI+G        +  ELL 
Sbjct: 566 AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625

Query: 439 KM 440
           ++
Sbjct: 626 EL 627



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 230/466 (49%), Gaps = 12/466 (2%)

Query: 5   SHGFVVLGRIL-----KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           S GF    R+L     K C T D      ++  +C +  + EA  L  KL  FGCE D+ 
Sbjct: 159 SGGFRNSVRVLEAMHAKGC-TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIV 217

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y  ++ GLC          L +EM        V C PN VT+ T+I  LC+ G  ++  
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+L QM +    P++  Y ++I G C       A  +   M   G++PNVV +N ++  L
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C   +  EA  LL  M Q     D  T+N L+D FC  G V+   EL   M S GC   V
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +ING+CK   I+ A+ L   M S G KP+ V +  +  GL    +   A +L  +
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M + G   +  T+ T I+ LCK G + +A+EL   + +  C  D+ +Y+++IDGL K+G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E ALEL   +    + PN + YS +   L  +G+++K   +F ++++  +  + + ++ 
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           +I    +  E  + I+    M     MP+ S  ++++  LA   ++
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 223/442 (50%), Gaps = 8/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A TF  +++GLC   RI +A  +  ++   GC P    Y  ++   CR+     ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            E M A G       C  +T     +++ +C++G VD+A  LL ++     + ++V+Y +
Sbjct: 169 LEAMHAKG-------CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C AK W + + L  EM+     PN+VTFN ++  LC+NG  +    +L  M +HG
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   Y T++DG C  G +  A E+   M S G K  V  Y+ ++ G C  +  + A 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L SEM  K    D V  N L     +   V+R  +L ++M  +G   D  TY T I+G 
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I EAV L  ++    C+ +  +Y  ++ GLC +GR   A EL   +      PN 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++ +I  LC  G +++A +L   M  N   P++I++  +I G  +  +  + +ELL+ 
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M    + P+  I S +   L++
Sbjct: 522 MVNKGISPNTIIYSSIACALSR 543



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 6/386 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ VTF +LI  LC          +  ++   GC PD+  Y T+++G+C+  H  VA  
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +   M +    +G+  +PN V Y T++ GLC      +A+ELL +M  K+   + VT+  
Sbjct: 308 ILNRMPS----YGL--KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++  FC     +    L  +M+  G  P+V+T+  +++  CK G +DEA  LL  M   G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +P+  +Y  +L G C  GR   A+EL   M   GC     +++ LIN  CK   +E A+
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  +ML  G  PD++ ++T+  GL +  + E A +L + M   G++ +T  Y +    L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G + + +++F  ++      D   YN++I  LCK    + A++ F  +     +PN 
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDM 405
            TY+++I GL ++G   +A++L  ++
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 181/361 (50%), Gaps = 6/361 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL ++ +   TPD   + ++I G+C E  +  A  +  ++  +G +P+V  Y T++ GLC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  A  L  EM      F   C  + VT+  ++D  C+ G VD+  ELL QM    
Sbjct: 333 SAERWKEAEELLSEM------FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+V+TYT+VI GFC     +EA  L   M   G +PN V++ +++  LC  G+  +A 
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L+  MIQ G  P+  T+NTL++  C  G V  A EL   M   GC   + SYS +I+G 
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  + E AL L + M++KGI P+ +I++++   L    +V +  ++FD ++   + +D 
Sbjct: 507 GKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   I  LCK      A++ F  +    C  +   Y  LI GL   G  + A EL   
Sbjct: 567 VLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626

Query: 370 L 370
           L
Sbjct: 627 L 627



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 144/284 (50%), Gaps = 6/284 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VTF  L+   C    +     L  ++   GC PDV TYTT++NG C+      A+ L 
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + M++        C+PNTV+YT ++ GLC  G    A+EL+ QM  +   PN VT+ ++I
Sbjct: 415 KSMSSCG------CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C      +A  L  +M+  G  P++++++ ++D L K GK +EA  LL++M+  G+ 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+   Y+++       GRVN   ++F +++    +     Y+ +I+  CK  E + A+  
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++ M+S G  P+   +  L  GL      + A +L  E+   G 
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L ++L     PD +T+T++I G C E  I EA  L   +   GC+P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++ GLC     + A  L  +M          C PN VT+ T+I+ LCK+G V++A EL
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQG------CPPNPVTFNTLINFLCKKGLVEQAIEL 483

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM      P++++Y++VI G   A    EA  L   M+++G+ PN + ++ I   L +
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++++  ++ D +    +R DA  YN ++   C     + A + F  M S GC     +
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKG 269
           Y++LI G       + A  L SE+ S+G
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 164/357 (45%), Gaps = 3/357 (0%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           V Y  ++ G C+ G   +            + PN  T+  V+RG C      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M  +G  P    ++VI++  C++G    + R+L+ M   G   D    N +L+  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           V+ A  L   +   GC+  + SY+ ++ G C  K       L  EM+     P++V  NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L      ER  ++  +M  +G   D   Y T IDG+CK G++  A E+ + +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + ++  YN+++ GLC + R + A EL   +       + VT++I++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +L   M  +  +P+VIT+  +I GF +     + + LL  M      P+    +IV+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 136/294 (46%), Gaps = 3/294 (1%)

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           VV +N ++   C+ G++  A RL   +    V P+A+T+  ++ G C  GR+  A E+  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   GC      Y +++   C++     ++ +   M +KG   D    N +   + E  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            V+ A  L  ++   G  AD  +Y   + GLC      +  EL   +  + C  +I  +N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +LI  LC++G  E   E+   +      P++  Y+ +I G+C +G ++ A ++   M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + PNV+ ++ +++G        +  ELL +M + +   D    +I+VD   +N
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 3/258 (1%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            YN ++ G+C  G++  A+ L  ++      +T F    ++ G C    I  AL +  EM
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFP---VVRGLCTRGRIADALEVLDEM 137

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             KG  P   +++ +            + ++ + M   G   DT      ++ +C+ G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EAV L   L    CE DI +YN+++ GLC + R     EL   +      PN+VT++ +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           IG LC +G  ++  ++   M E+   P++  +  +I G  +        E+L++M    +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 446 MPDASIVSIVVDLLAKNE 463
            P+    + V+  L   E
Sbjct: 318 KPNVVCYNTVLKGLCSAE 335


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 235/457 (51%), Gaps = 9/457 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCE-PDVFTYT 62
           S  F VL  + K  F  +      ++KG C   +  +A +LF+++ R + C  PD  TY 
Sbjct: 94  SFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYN 153

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TLVNG C+      A  LFE M  G       C PN VTY+ +ID  CK G V +   LL
Sbjct: 154 TLVNGFCKAKRLAEARVLFEAMKKGGD-----CRPNLVTYSVLIDCYCKSGEVGEGLGLL 208

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ + +K +V  Y+S+I  FC   D    + LF EM+ + V PNVVT++ +M  L + 
Sbjct: 209 EEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRT 268

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+  EAS +L  M   GVRPD   Y  L DG C  GR   A ++   M   G +    +Y
Sbjct: 269 GRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTY 328

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-- 300
           ++++NG CK   ++ A  +   M+ KG KPD V +NTL  GL    ++  A  L+  +  
Sbjct: 329 NVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLS 388

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           ++  V  D +T    I GLCK G + +A  +  ++  +  + +I  YN LI+G   + +L
Sbjct: 389 EKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKL 448

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL+L++        PN +TYS+MI GLC    +  AR LF  M+++ + P VI ++ L
Sbjct: 449 IEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNAL 508

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +    R +   +   L  +M+ +N   D    +I++D
Sbjct: 509 MTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIID 545



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/533 (28%), Positives = 256/533 (48%), Gaps = 73/533 (13%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFTYTTLVNGLCRTSHTIV 76
           C  PD VT+ +L+ G C   R+ EA  LF  ++  G C P++ TY+ L++  C++     
Sbjct: 144 CVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGE 203

Query: 77  ALNLFEEMAN------------------GNGEFGVVCE-----------PNTVTYTTIID 107
            L L EEM                    G G+     E           PN VTY+ ++ 
Sbjct: 204 GLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQ 263

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
           GL + G   +A E+L  M  + ++P+VV YT +  G C      +A ++   M+ +G +P
Sbjct: 264 GLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEP 323

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHG---------------------------- 199
             +T+NV+++ LCK  +MD+A  ++++M++ G                            
Sbjct: 324 GTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLW 383

Query: 200 ---------VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
                    V+PD FT N L+ G C  GRV+ A  +  SM  MG +  + +Y+ LI GY 
Sbjct: 384 KLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYL 443

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
             +++  AL L+   +  G  P+ + ++ +  GL ++  +  A  LF +M+ +G+     
Sbjct: 444 AARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVI 503

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            Y   +  LC+   + +A  LF  +R +    D+ ++N +IDG  K+G ++ A EL   +
Sbjct: 504 DYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEM 563

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               LVP+ VT+SI+I      G +D+A  L+  M     VP V+ FD L++G+    E 
Sbjct: 564 FMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGET 623

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS---LPSFTVHEQQEE 480
            K+I LLH+M + +V+ D+ + S ++  L     +L+    LP F+   QQ E
Sbjct: 624 EKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFS---QQSE 673



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 144/305 (47%), Gaps = 3/305 (0%)

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           D    P+    + ++D L K  + D    +   M+   V P   + + L + F  T   +
Sbjct: 35  DPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPS 94

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK--GIKPDVVIHNT 279
            A  +   M   G    V++ ++++ G+C++ + + A+SL+S+M      + PD V +NT
Sbjct: 95  FAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNT 154

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNG-VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           L  G  +  ++  A  LF+ M++ G    +  TY   ID  CK+G + E + L   +   
Sbjct: 155 LVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             + D+  Y+SLI   C  G +E   ELF  +    + PNVVTYS ++ GL   G+  +A
Sbjct: 215 GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREA 274

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            ++  DM    V P+V+ + +L  G  +       I++L  M +    P     ++VV+ 
Sbjct: 275 SEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNG 334

Query: 459 LAKNE 463
           L K +
Sbjct: 335 LCKED 339


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 225/422 (53%), Gaps = 12/422 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V++ +++KGLC   R  +   L  ++    C P++ T+ TL+  LCR         LF
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG-------LF 267

Query: 82  E---EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           E   E+     E G  C P+   Y TIIDG+CKEG ++ A E+L +M    +KPNVV Y 
Sbjct: 268 ERVHEVLAQMSEHG--CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +V++G C A+ W EA+ L  EM  +    + VTFN+++D  C+NG +D    LL+ M+ H
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  PD  TY T+++GFC  G ++ A  L  SM S GCK    SY+I++ G C       A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L S+M+ +G  P+ V  NTL   L +   VE+A +L  +M  NG + D  +Y T IDG
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L K G   EA+EL + +       +   Y+S+   L + GR+   +++F ++    +  +
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ +I  LC   + D+A D F  M  N  +PN  T+ MLI+G        +  ELL 
Sbjct: 566 AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625

Query: 439 KM 440
           ++
Sbjct: 626 EL 627



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 230/466 (49%), Gaps = 12/466 (2%)

Query: 5   SHGFVVLGRIL-----KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           S GF    R+L     K C T D      ++  +C +  + EA  L  KL  FGCE D+ 
Sbjct: 159 SGGFRNSVRVLEAMHAKGC-TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIV 217

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y  ++ GLC          L +EM        V C PN VT+ T+I  LC+ G  ++  
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+L QM +    P++  Y ++I G C       A  +   M   G++PNVV +N ++  L
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C   +  EA  LL  M Q     D  T+N L+D FC  G V+   EL   M S GC   V
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +ING+CK   I+ A+ L   M S G KP+ V +  +  GL    +   A +L  +
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M + G   +  T+ T I+ LCK G + +A+EL   + +  C  D+ +Y+++IDGL K+G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E ALEL   +    + PN + YS +   L  +G+++K   +F ++++  +  + + ++ 
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           +I    +  E  + I+    M     MP+ S  ++++  LA   ++
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 223/442 (50%), Gaps = 8/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A TF  +++GLC   RI +A  +  ++   GC P    Y  ++   CR+     ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            E M A G       C  +T     +++ +C++G VD+A  LL ++     + ++V+Y +
Sbjct: 169 LEAMHAKG-------CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C AK W + + L  EM+     PN+VTFN ++  LC+NG  +    +L  M +HG
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   Y T++DG C  G +  A E+   M S G K  V  Y+ ++ G C  +  + A 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L SEM  K    D V  N L     +   V+R  +L ++M  +G   D  TY T I+G 
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I EAV L  ++    C+ +  +Y  ++ GLC +GR   A EL   +      PN 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++ +I  LC  G +++A +L   M  N   P++I++  +I G  +  +  + +ELL+ 
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M    + P+  I S +   L++
Sbjct: 522 MVNKGISPNTIIYSSIACALSR 543



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 6/386 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ VTF +LI  LC          +  ++   GC PD+  Y T+++G+C+  H  VA  
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +   M +    +G+  +PN V Y T++ GLC      +A+ELL +M  K+   + VT+  
Sbjct: 308 ILNRMPS----YGL--KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++  FC     +    L  +M+  G  P+V+T+  +++  CK G +DEA  LL  M   G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +P+  +Y  +L G C  GR   A+EL   M   GC     +++ LIN  CK   +E A+
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  +ML  G  PD++ ++T+  GL +  + E A +L + M   G++ +T  Y +    L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G + + +++F  ++      D   YN++I  LCK    + A++ F  +     +PN 
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDM 405
            TY+++I GL ++G   +A++L  ++
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 181/361 (50%), Gaps = 6/361 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL ++ +   TPD   + ++I G+C E  +  A  +  ++  +G +P+V  Y T++ GLC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  A  L  EM      F   C  + VT+  ++D  C+ G VD+  ELL QM    
Sbjct: 333 SAERWKEAEELLSEM------FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+V+TYT+VI GFC     +EA  L   M   G +PN V++ +++  LC  G+  +A 
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L+  MIQ G  P+  T+NTL++  C  G V  A EL   M   GC   + SYS +I+G 
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  + E AL L + M++KGI P+ +I++++   L    +V +  ++FD ++   + +D 
Sbjct: 507 GKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   I  LCK      A++ F  +    C  +   Y  LI GL   G  + A EL   
Sbjct: 567 VLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626

Query: 370 L 370
           L
Sbjct: 627 L 627



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 144/284 (50%), Gaps = 6/284 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VTF  L+   C    +     L  ++   GC PDV TYTT++NG C+      A+ L 
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + M++        C+PNTV+YT ++ GLC  G    A+EL+ QM  +   PN VT+ ++I
Sbjct: 415 KSMSSCG------CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C      +A  L  +M+  G  P++++++ ++D L K GK +EA  LL++M+  G+ 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+   Y+++       GRVN   ++F +++    +     Y+ +I+  CK  E + A+  
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++ M+S G  P+   +  L  GL      + A +L  E+   G 
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L ++L     PD +T+T++I G C E  I EA  L   +   GC+P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++ GLC     + A  L  +M          C PN VT+ T+I+ LCK+G V++A EL
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQG------CPPNPVTFNTLINFLCKKGLVEQAIEL 483

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM      P++++Y++VI G   A    EA  L   M+++G+ PN + ++ I   L +
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++++  ++ D +    +R DA  YN ++   C     + A + F  M S GC     +
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKG 269
           Y++LI G       + A  L SE+ S+G
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 164/357 (45%), Gaps = 3/357 (0%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           V Y  ++ G C+ G   +            + PN  T+  V+RG C      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M  +G  P    ++VI++  C++G    + R+L+ M   G   D    N +L+  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           V+ A  L   +   GC+  + SY+ ++ G C  K       L  EM+     P++V  NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L      ER  ++  +M  +G   D   Y T IDG+CK G++  A E+ + +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + ++  YN+++ GLC + R + A EL   +       + VT++I++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +L   M  +  +P+VIT+  +I GF +     + + LL  M      P+    +IV+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 136/294 (46%), Gaps = 3/294 (1%)

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           VV +N ++   C+ G++  A RL   +    V P+A+T+  ++ G C  GR+  A E+  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   GC      Y +++   C++     ++ +   M +KG   D    N +   + E  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            V+ A  L  ++   G  AD  +Y   + GLC      +  EL   +  + C  +I  +N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +LI  LC++G  E   E+   +      P++  Y+ +I G+C +G ++ A ++   M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + PNV+ ++ +++G        +  ELL +M + +   D    +I+VD   +N
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 3/258 (1%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            YN ++ G+C  G++  A+ L  ++      +T F    ++ G C    I  AL +  EM
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFP---VVRGLCTRGRIADALEVLDEM 137

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             KG  P   +++ +            + ++ + M   G   DT      ++ +C+ G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EAV L   L    CE DI +YN+++ GLC + R     EL   +      PN+VT++ +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           IG LC +G  ++  ++   M E+   P++  +  +I G  +        E+L++M    +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 446 MPDASIVSIVVDLLAKNE 463
            P+    + V+  L   E
Sbjct: 318 KPNVVCYNTVLKGLCSAE 335


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 225/422 (53%), Gaps = 12/422 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V++ +++KGLC   R  +   L  ++    C P++ T+ TL+  LCR         LF
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG-------LF 267

Query: 82  E---EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           E   E+     E G  C P+   Y TIIDG+CKEG ++ A E+L +M    +KPNVV Y 
Sbjct: 268 ERVHEVLAQMSEHG--CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +V++G C A+ W EA+ L  EM  +    + VTFN+++D  C+NG +D    LL+ M+ H
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  PD  TY T+++GFC  G ++ A  L  SM S GCK    SY+I++ G C       A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L S+M+ +G  P+ V  NTL   L +   VE+A +L  +M  NG + D  +Y T IDG
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L K G   EA+EL + +       +   Y+S+   L + GR+   +++F ++    +  +
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ +I  LC   + D+A D F  M  N  +PN  T+ MLI+G        +  ELL 
Sbjct: 566 AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625

Query: 439 KM 440
           ++
Sbjct: 626 EL 627



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 230/466 (49%), Gaps = 12/466 (2%)

Query: 5   SHGFVVLGRIL-----KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           S GF    R+L     K C T D      ++  +C +  + EA  L  KL  FGCE D+ 
Sbjct: 159 SGGFRNSVRVLEAMHAKGC-TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIV 217

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y  ++ GLC          L +EM        V C PN VT+ T+I  LC+ G  ++  
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+L QM +    P++  Y ++I G C       A  +   M   G++PNVV +N ++  L
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C   +  EA  LL  M Q     D  T+N L+D FC  G V+   EL   M S GC   V
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +ING+CK   I+ A+ L   M S G KP+ V +  +  GL    +   A +L  +
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M + G   +  T+ T I+ LCK G + +A+EL   + +  C  D+ +Y+++IDGL K+G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E ALEL   +    + PN + YS +   L  +G+++K   +F ++++  +  + + ++ 
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           +I    +  E  + I+    M     MP+ S  ++++  LA   ++
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 223/442 (50%), Gaps = 8/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A TF  +++GLC   RI +A  +  ++   GC P    Y  ++   CR+     ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            E M A G       C  +T     +++ +C++G VD+A  LL ++     + ++V+Y +
Sbjct: 169 LEAMHAKG-------CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C AK W + + L  EM+     PN+VTFN ++  LC+NG  +    +L  M +HG
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   Y T++DG C  G +  A E+   M S G K  V  Y+ ++ G C  +  + A 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L SEM  K    D V  N L     +   V+R  +L ++M  +G   D  TY T I+G 
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I EAV L  ++    C+ +  +Y  ++ GLC +GR   A EL   +      PN 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++ +I  LC  G +++A +L   M  N   P++I++  +I G  +  +  + +ELL+ 
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M    + P+  I S +   L++
Sbjct: 522 MVNKGISPNTIIYSSIACALSR 543



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 6/386 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ VTF +LI  LC          +  ++   GC PD+  Y T+++G+C+  H  VA  
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +   M +    +G+  +PN V Y T++ GLC      +A+ELL +M  K+   + VT+  
Sbjct: 308 ILNRMPS----YGL--KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++  FC     +    L  +M+  G  P+V+T+  +++  CK G +DEA  LL  M   G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +P+  +Y  +L G C  GR   A+EL   M   GC     +++ LIN  CK   +E A+
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  +ML  G  PD++ ++T+  GL +  + E A +L + M   G++ +T  Y +    L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G + + +++F  ++      D   YN++I  LCK    + A++ F  +     +PN 
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDM 405
            TY+++I GL ++G   +A++L  ++
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 181/361 (50%), Gaps = 6/361 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL ++ +   TPD   + ++I G+C E  +  A  +  ++  +G +P+V  Y T++ GLC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  A  L  EM      F   C  + VT+  ++D  C+ G VD+  ELL QM    
Sbjct: 333 SAERWKEAEELLSEM------FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+V+TYT+VI GFC     +EA  L   M   G +PN V++ +++  LC  G+  +A 
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L+  MIQ G  P+  T+NTL++  C  G V  A EL   M   GC   + SYS +I+G 
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  + E AL L + M++KGI P+ +I++++   L    +V +  ++FD ++   + +D 
Sbjct: 507 GKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   I  LCK      A++ F  +    C  +   Y  LI GL   G  + A EL   
Sbjct: 567 VLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626

Query: 370 L 370
           L
Sbjct: 627 L 627



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 144/284 (50%), Gaps = 6/284 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VTF  L+   C    +     L  ++   GC PDV TYTT++NG C+      A+ L 
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + M++        C+PNTV+YT ++ GLC  G    A+EL+ QM  +   PN VT+ ++I
Sbjct: 415 KSMSSCG------CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C      +A  L  +M+  G  P++++++ ++D L K GK +EA  LL++M+  G+ 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+   Y+++       GRVN   ++F +++    +     Y+ +I+  CK  E + A+  
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++ M+S G  P+   +  L  GL      + A +L  E+   G 
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L ++L     PD +T+T++I G C E  I EA  L   +   GC+P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++ GLC     + A  L  +M          C PN VT+ T+I+ LCK+G V++A EL
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQG------CPPNPVTFNTLINFLCKKGLVEQAIEL 483

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM      P++++Y++VI G   A    EA  L   M+++G+ PN + ++ I   L +
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++++  ++ D +    +R DA  YN ++   C     + A + F  M S GC     +
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKG 269
           Y++LI G       + A  L SE+ S+G
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 164/357 (45%), Gaps = 3/357 (0%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           V Y  ++ G C+ G   +            + PN  T+  V+RG C      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M  +G  P    ++VI++  C++G    + R+L+ M   G   D    N +L+  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           V+ A  L   +   GC+  + SY+ ++ G C  K       L  EM+     P++V  NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L      ER  ++  +M  +G   D   Y T IDG+CK G++  A E+ + +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + ++  YN+++ GLC + R + A EL   +       + VT++I++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +L   M  +  +P+VIT+  +I GF +     + + LL  M      P+    +IV+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 136/294 (46%), Gaps = 3/294 (1%)

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           VV +N ++   C+ G++  A RL   +    V P+A+T+  ++ G C  GR+  A E+  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   GC      Y +++   C++     ++ +   M +KG   D    N +   + E  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            V+ A  L  ++   G  AD  +Y   + GLC      +  EL   +  + C  +I  +N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +LI  LC++G  E   E+   +      P++  Y+ +I G+C +G ++ A ++   M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + PNV+ ++ +++G        +  ELL +M + +   D    +I+VD   +N
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 3/258 (1%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            YN ++ G+C  G++  A+ L  ++      +T F    ++ G C    I  AL +  EM
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFP---VVRGLCTRGRIADALEVLDEM 137

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             KG  P   +++ +            + ++ + M   G   DT      ++ +C+ G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EAV L   L    CE DI +YN+++ GLC + R     EL   +      PN+VT++ +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           IG LC +G  ++  ++   M E+   P++  +  +I G  +        E+L++M    +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 446 MPDASIVSIVVDLLAKNE 463
            P+    + V+  L   E
Sbjct: 318 KPNVVCYNTVLKGLCSAE 335


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/443 (33%), Positives = 229/443 (51%), Gaps = 6/443 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L    TP+  T  +++ G C    ++EA    +K+   G   D FTYT+L+ G CR  +
Sbjct: 195 MLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKN 254

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  +F  M N        C  N V+YT +I G C+   VD+A +L  QM + N  P 
Sbjct: 255 VDAANAIFLSMPNKG------CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPT 308

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V TYT +I   C      EA  +F EM ++  QPNV T+ V++  LC++   D+A ++L+
Sbjct: 309 VRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILN 368

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M++ G+ P   TYN L+DG+C  G    A E+   MES  C     +Y+ LI G+C+ K
Sbjct: 369 GMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGK 428

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            I  A+SL  +ML + ++P+VV +N L  G  +   +  A+KL   M  +G+  D WTY 
Sbjct: 429 NIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYS 488

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
            FID LCK G + EA  LF +L+    + +   Y++LIDG CK G++     L   +   
Sbjct: 489 VFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSA 548

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
             VPN +TY+ +I G C +    +AR L   M +  + P   T+ +LI   ++ +E  + 
Sbjct: 549 GCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQA 608

Query: 434 IELLHKMKEINVMPDASIVSIVV 456
            ++  +M      PD  I +  +
Sbjct: 609 HDMFDQMLSTGSHPDVFIYTAFI 631



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 225/461 (48%), Gaps = 6/461 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V    + + +I+++  + D  T+TSLI G C    +  A A+F  +   GC  +  +
Sbjct: 217 LGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVS 276

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G C       AL LF +M   N      C P   TYT II  LC+ G   +A  
Sbjct: 277 YTNLIHGFCEARRVDEALKLFSQMHEDN------CWPTVRTYTVIIFALCQLGRKTEALN 330

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M +K+ +PNV TYT +I   C   ++++AK++   M+++G+ P+VVT+N ++D  C
Sbjct: 331 MFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYC 390

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G    A  +L LM  +   P+A TYN L+ GFC    ++ A  L   M     +  V 
Sbjct: 391 KKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVV 450

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILI+G CK  ++  A  L S M   G+ PD   ++     L +   VE A  LF+ +
Sbjct: 451 TYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESL 510

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G+ A+   Y T IDG CK G + +   L   +    C  +   YNSLIDG CK    
Sbjct: 511 KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNF 570

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  L   +    + P   TY+I+I  L  D + D+A D+F  M      P+V  +   
Sbjct: 571 KEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAF 630

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I  +           L+ KM    +MPD  + ++ +D   +
Sbjct: 631 IHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGR 671



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 213/436 (48%), Gaps = 30/436 (6%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C   + V++T+LI G C   R+ EA  LF+++    C P V TYT ++  LC+     
Sbjct: 268 KGCLR-NEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKT 326

Query: 76  VALNLFEEMANGNGEFGV---------VCE--------------------PNTVTYTTII 106
            ALN+F+EM   + +  V         +CE                    P+ VTY  +I
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           DG CK+G    A E+L  M+  N  PN  TY  +I GFC  K+ ++A  L  +M+++ +Q
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           PNVVT+N+++   CK G +  A +LL LM + G+ PD +TY+  +D  C  G V  A+ L
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL 506

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           F S++  G K     YS LI+GYCK  ++     L  +MLS G  P+ + +N+L  G  +
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK 566

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
               + A  L D M +  +     TY   ID L K+    +A ++F  +       D+  
Sbjct: 567 EKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFI 626

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y + I   C  GRL+ A  L   +    ++P+ + Y++ I      G +D A  +   M 
Sbjct: 627 YTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMH 686

Query: 407 ENAVVPNVITFDMLIR 422
           E    P+  T+  LI+
Sbjct: 687 EVGCEPSYYTYSCLIK 702



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 210/468 (44%), Gaps = 37/468 (7%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +L+    P  VT+ +LI G C +     A  + + +    C P+  TY  L+ G C
Sbjct: 366 ILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFC 425

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R  +   A++L  +M           +PN VTY  +I G CKEG +  A +LL  M +  
Sbjct: 426 RGKNIHKAMSLLHKMLERK------LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESG 479

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+  TY+  I   C      EA+ LF  + ++G++ N V ++ ++D  CK GK+ +  
Sbjct: 480 LVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGR 539

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LLD M+  G  P++ TYN+L+DG+C       A+ L   M     +    +Y+ILI+  
Sbjct: 540 FLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNL 599

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH-QVERAFKLFDEMQRNGVAAD 308
            K+ E + A  ++ +MLS G  PDV I+ T F+  +  H +++ A  L  +M   G+  D
Sbjct: 600 LKDDEFDQAHDMFDQMLSTGSHPDVFIY-TAFIHAYCSHGRLKDAEVLICKMNAKGIMPD 658

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI------ 362
           T  Y  FID   + G I  A  +   +  + CE     Y+ LI  L  +   E+      
Sbjct: 659 TMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSEL 718

Query: 363 -----------------------ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
                                   L+LF  +      PN  TY   I GLC  G ++ A 
Sbjct: 719 SDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAH 778

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LF  M+E    PN   ++ L+    ++    + I  L  M E   +P
Sbjct: 779 RLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLP 826



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 212/491 (43%), Gaps = 72/491 (14%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           +     +L ++L+    P+ VT+  LI G C E  +  A  L + +   G  PD +TY+ 
Sbjct: 430 IHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSV 489

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
            ++ LC+      A +LFE +     E G+  + N V Y+T+IDG CK G V   + LL 
Sbjct: 490 FIDTLCKRGLVEEARSLFESLK----EKGI--KANEVIYSTLIDGYCKVGKVSDGRFLLD 543

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M      PN +TY S+I G+C  K++ EA+ L   M+ + ++P   T+ +++D L K+ 
Sbjct: 544 KMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDD 603

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           + D+A  + D M+  G  PD F Y   +  +C  GR+  A+ L   M + G       Y+
Sbjct: 604 EFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYT 663

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL----------------------- 280
           + I+ Y +   I+GA  +   M   G +P    ++ L                       
Sbjct: 664 LFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSS 723

Query: 281 ------FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
                 F   +     E    LF +M  +G A +  TY  FI GLCK G +  A  LF  
Sbjct: 724 GVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDH 783

Query: 335 LRILKCEFDIRAYNSLIDGLCKSG-------RLEIALELFRSLP----CGVLVPNV---- 379
           ++      +   YNSL+   C+ G        L+I +E  R LP    C +L+  +    
Sbjct: 784 MKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIE-NRHLPHLDSCKLLLCGLYDEG 842

Query: 380 ---------------------VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
                                + + ++I GL   G  DK  DLF  ME      +  T+ 
Sbjct: 843 NDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYS 902

Query: 419 MLIRGFIRINE 429
           MLI GF  I E
Sbjct: 903 MLIEGFDGIQE 913



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 165/343 (48%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D+ K + L+M D  + PN+ T  +++ G+C   +  EA+    +++  G+  +  T+  
Sbjct: 185 IDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTS 244

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++   C+N  +D A+ +   M   G   +  +Y  L+ GFC   RV+ A +LF  M    
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C  TV +Y+++I   C+      AL+++ EM  K  +P+V  +  L   L E    + A 
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           K+ + M   G+     TY   IDG CK G    A+E+   +    C  + R YN LI G 
Sbjct: 365 KILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGF 424

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C+   +  A+ L   +    L PNVVTY+I+I G C +G +  A  L   M E+ +VP+ 
Sbjct: 425 CRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDE 484

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            T+ + I    +     +   L   +KE  +  +  I S ++D
Sbjct: 485 WTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLID 527



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 190/452 (42%), Gaps = 70/452 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   + +L  + +S   PD  T++  I  LC    + EA +LF  L+  G + +   Y
Sbjct: 463 GDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIY 522

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL++G C+         L ++M +        C PN++TY ++IDG CKE    +A+ L
Sbjct: 523 STLIDGYCKVGKVSDGRFLLDKMLSAG------CVPNSITYNSLIDGYCKEKNFKEARLL 576

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M  ++I+P   TYT +I       ++++A  +F +M+  G  P+V  +   +   C 
Sbjct: 577 VDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS 636

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++ +A  L+  M   G+ PD   Y   +D +   G ++ A  +   M  +GC+ + ++
Sbjct: 637 HGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYT 696

Query: 242 YSILIN--GYCKNKEI---------------------------EGALSLYSEMLSKGIKP 272
           YS LI      K KE+                           E  L L+ +M   G  P
Sbjct: 697 YSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAP 756

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +   +     GL ++  +E A +LFD M+  G + +   Y + +   C+ G   EA+   
Sbjct: 757 NANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWL 816

Query: 333 HTL---------------------------------RILKCEF--DIRAYNSLIDGLCKS 357
             +                                   L+CE+  D   +  LIDGL K 
Sbjct: 817 DIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKK 876

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           G  +   +LF  +       +  TYS++I G 
Sbjct: 877 GLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 123/243 (50%)

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           K T+  Y++L+    +   I+   S+Y EML   + P++   NT+  G  ++  V  A  
Sbjct: 166 KLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAEL 225

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
              ++ + G++ DT+TY + I G C+N  +  A  +F ++    C  +  +Y +LI G C
Sbjct: 226 YVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFC 285

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           ++ R++ AL+LF  +      P V TY+++I  LC  G+  +A ++F +M E    PNV 
Sbjct: 286 EARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH 345

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
           T+ +LI      +      ++L+ M E  ++P     + ++D   K  +S ++L   ++ 
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405

Query: 476 EQQ 478
           E  
Sbjct: 406 ESN 408



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 35/284 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+    V++ ++      PD + +T  I        I  A  +  ++   GCEP  +TY
Sbjct: 638 GRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTY 697

Query: 62  TTLVNGLCRTSHTIV-----------------------------ALNLFEEMANGNGEFG 92
           + L+  L       V                              L+LF +MA    E G
Sbjct: 698 SCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMA----EHG 753

Query: 93  VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
             C PN  TY   I GLCK G ++ A  L   MK+K   PN   Y S++   C    + E
Sbjct: 754 --CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGE 811

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A R    M++    P++ +  +++  L   G  ++A R+    +Q     D   +  L+D
Sbjct: 812 AIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLID 871

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           G    G  +   +LF  ME+ GC+    +YS+LI G+   +EI+
Sbjct: 872 GLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 120/308 (38%), Gaps = 35/308 (11%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++L +   PD   +T+ I   C+  R+ +A  L  K+   G  PD   YT  ++   R  
Sbjct: 614 QMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFG 673

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIID---------------------GLCK 111
               A  + + M        V CEP+  TY+ +I                      G+  
Sbjct: 674 SIDGAFGILKRMHE------VGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVAS 727

Query: 112 EGFVDKAK--------ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
             F +  +        +L  +M +    PN  TY   I G C       A RLF  M ++
Sbjct: 728 NDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEK 787

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G  PN   +N ++   C+ G   EA R LD+MI++   P   +   LL G    G    A
Sbjct: 788 GQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKA 847

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           K +F S       +    + +LI+G  K    +    L+  M ++G +     ++ L  G
Sbjct: 848 KRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEG 907

Query: 284 LFEIHQVE 291
              I +++
Sbjct: 908 FDGIQEID 915


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/444 (33%), Positives = 239/444 (53%), Gaps = 8/444 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPDVFTYTTLVNGL 68
           +L  +L+    P+  T+  L++ LCA  +  EA  +    +R  GC P+V TY TLV   
Sbjct: 141 LLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAF 200

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR      A  L   M  G    GV   P+ VT+ T+++GLCK G ++ A+++  +M  +
Sbjct: 201 CRAGEVDAAERLVGVMREG----GV--RPSLVTFNTVVNGLCKAGRMEDARKMFDEMARE 254

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            + P+ V+Y +++ G+C A   +EA  +F EM  +GV P+VVTF  ++  +C+ G ++ A
Sbjct: 255 GLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERA 314

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L+  M + G+R + FT+  L+DGFC  G ++ A      M     + +V  Y++LING
Sbjct: 315 VALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLING 374

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           YCK   ++ A  L  EM +KG+KPDVV ++T+  G  +I   + AF+L  +M + GV  D
Sbjct: 375 YCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPD 434

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY + I GLC+   + +A ELF  +  L  + D   Y +LIDG CK G ++ AL L  
Sbjct: 435 AITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHD 494

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    ++P+VVTYS++I GL    +  +A+ L   +     VP+ I ++ L+    R  
Sbjct: 495 EMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH-CCRTA 553

Query: 429 EPSKVIELLHKMKEINVMPDASIV 452
           E   V+ LL       +M  A  V
Sbjct: 554 EFKSVVALLKGFSMKGLMNQADKV 577



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 194/362 (53%), Gaps = 2/362 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ + Y  ++  L  +  +  A+ LL  M    + PNV TY  ++R  C      EA  +
Sbjct: 118 PSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 157 F-IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
              +M   G  PNVVT+N ++   C+ G++D A RL+ +M + GVRP   T+NT+++G C
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             GR+  A+++F  M   G      SY+ L++GYCK   +  AL++++EM  KG+ PDVV
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
              +L   +     +ERA  L  +M+  G+  + +T+   IDG C+NG++ +A+     +
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           R  + +  +  YN LI+G CK GR++ A EL   +    + P+VVTYS ++ G C  G  
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           D A +L   M +  VVP+ IT+  LIRG           EL  KM ++ + PD    + +
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 456 VD 457
           +D
Sbjct: 477 ID 478



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 237/478 (49%), Gaps = 21/478 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     ++G + +    P  VTF +++ GLC   R+ +A  +F ++   G  PD  +Y
Sbjct: 204 GEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSY 263

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLV+G C+      AL +F EMA    + GVV  P+ VT+T++I  +C+ G +++A  L
Sbjct: 264 NTLVSGYCKAGCLHEALAVFAEMA----QKGVV--PDVVTFTSLIHAMCRAGNLERAVAL 317

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + QM+++ ++ N  T+T++I GFC     ++A     EM +  +QP+VV +NV+++  CK
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+MDEA  L+  M   G++PD  TY+T+L G+C  G  + A EL   M   G      +
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAIT 437

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI G C+ + +  A  L+ +ML  G++PD   + TL  G  +   V++A  L DEM 
Sbjct: 438 YSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMI 497

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-------------RILKC--EFDIRA 346
           + GV  D  TY   IDGL K+    EA  L   L              ++ C    + ++
Sbjct: 498 KKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKS 557

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
             +L+ G    G +  A ++++S+       +   YS++I G C  G + KA      + 
Sbjct: 558 VVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLL 617

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
                PN  +   L+RG        +   ++ ++     + DA     ++DL  K  +
Sbjct: 618 RCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEGV 675



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 197/367 (53%), Gaps = 1/367 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQ-MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           PN  TY  ++  LC  G  ++A  ++   M+     PNVVTY +++  FC A + + A+R
Sbjct: 152 PNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAER 211

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           L   M + GV+P++VTFN +++ LCK G+M++A ++ D M + G+ PD  +YNTL+ G+C
Sbjct: 212 LVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYC 271

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G ++ A  +F  M   G    V +++ LI+  C+   +E A++L  +M  +G++ +  
Sbjct: 272 KAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEF 331

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
               L  G      ++ A     EM+   +      Y   I+G CK G + EA EL H +
Sbjct: 332 TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM 391

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                + D+  Y++++ G CK G  + A EL R +    +VP+ +TYS +I GLC + ++
Sbjct: 392 EAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRL 451

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
             A +LF  M +  + P+  T+  LI G  +     K + L  +M +  V+PD    S++
Sbjct: 452 GDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVL 511

Query: 456 VDLLAKN 462
           +D L+K+
Sbjct: 512 IDGLSKS 518



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 123/229 (53%), Gaps = 21/229 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G     F +  ++LK    PDA+T++SLI+GLC E R+ +A  LF K+   G +PD FT
Sbjct: 413 IGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFT 472

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL++G C+  +   AL+L +EM       GV+  P+ VTY+ +IDGL K     +A+ 
Sbjct: 473 YTTLIDGHCKEGNVQKALSLHDEMIKK----GVL--PDVVTYSVLIDGLSKSARTKEAQR 526

Query: 121 LLLQMKDKNIKPNVVTY---------------TSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           LL ++  ++  P+ + Y                ++++GF      N+A +++  M+D+  
Sbjct: 527 LLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHW 586

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           + +   ++V++   C+ G + +A      +++ G  P++ +  +L+ G 
Sbjct: 587 KLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGL 635


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/385 (36%), Positives = 219/385 (56%), Gaps = 6/385 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+   C  S++  A +   K+   G EP + T+ +L+NG CR      AL +F++M    
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV--- 178

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
              G+  +PN V Y TIIDGLCK   VD A +LL +M+   I P+VVTY S+I G C + 
Sbjct: 179 ---GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            W++A R+   M  + + P+V TFN ++D   K G++ EA    + MI+  + PD  TY+
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+ G C+  R++ A+E+F  M S GC   V +YSILINGYCK+K++E  + L+ EM  +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G+  + V +  L  G     ++  A ++F  M   GV  +  TY   + GLC NG I +A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + +   ++    + DI  YN +I G+CK+G +  A +++ SL C  L+P++ TY+ M+ G
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475

Query: 389 LCNDGQMDKARDLFLDMEENAVVPN 413
           L   G   +A  LF  M+E+ ++PN
Sbjct: 476 LYKKGLRREADALFRKMKEDGILPN 500



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 222/432 (51%), Gaps = 6/432 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    F+ L+  +    +      L+ ++++ G   ++ T   L+N  CR S   +AL+ 
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M     E      P+ VT+ ++++G C+   V  A  +  QM     KPNVV Y ++
Sbjct: 139 LGKMIKLGHE------PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C +K  + A  L   M   G+ P+VVT+N ++  LC +G+  +A+R++  M +  +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD FT+N L+D     GRV+ A+E +  M        + +YS+LI G C    ++ A  
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++  M+SKG  PDVV ++ L  G  +  +VE   KLF EM + GV  +T TY   I G C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G +  A E+F  +       +I  YN L+ GLC +G++E AL +   +    +  ++V
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I+I G+C  G++  A D++  +    ++P++ T+  ++ G  +     +   L  KM
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492

Query: 441 KEINVMPDASIV 452
           KE  ++P+   V
Sbjct: 493 KEDGILPNECYV 504



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 205/377 (54%), Gaps = 8/377 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++S     LG+++K    P  VTF SL+ G C   R+ +A  +F ++   G +P+V  Y 
Sbjct: 131 QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYN 190

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+++GLC++     AL+L   M  +G G       P+ VTY ++I GLC  G    A  +
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDGIG-------PDVVTYNSLISGLCSSGRWSDATRM 243

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M  + I P+V T+ ++I         +EA+  + EM+ + + P++VT+++++  LC 
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++DEA  +   M+  G  PD  TY+ L++G+C + +V H  +LF  M   G      +
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI GYC+  ++  A  ++  M+  G+ P+++ +N L  GL +  ++E+A  +  +MQ
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +NG+ AD  TY   I G+CK G + +A +++ +L       DI  Y +++ GL K G   
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483

Query: 362 IALELFRSLPCGVLVPN 378
            A  LFR +    ++PN
Sbjct: 484 EADALFRKMKEDGILPN 500



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 177/348 (50%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D + +L   M      P++  ++ ++      K ++    L+ +M   G+  N+ T N+
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++  C+  ++  A   L  MI+ G  P   T+ +LL+GFC   RV  A  +F  M  MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            K  V  Y+ +I+G CK+K+++ AL L + M   GI PDVV +N+L  GL    +   A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           ++   M +  +  D +T+   ID   K G + EA E +  +     + DI  Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C   RL+ A E+F  +      P+VVTYSI+I G C   +++    LF +M +  VV N 
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +T+ +LI+G+ R  + +   E+  +M    V P+    ++++  L  N
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 172/336 (51%), Gaps = 20/336 (5%)

Query: 141 IRGFCYAK-------DWNEAKR-------------LFIEMMDQGVQPNVVTFNVIMDELC 180
           I GFC+++       D+ E  R             LF  M+     P++  F+ ++  + 
Sbjct: 33  ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  K D    L + M   G+  +  T N LL+ FC   +++ A      M  +G + ++ 
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           ++  L+NG+C+   +  AL ++ +M+  G KP+VVI+NT+  GL +  QV+ A  L + M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +++G+  D  TY + I GLC +G   +A  +   +   +   D+  +N+LID   K GR+
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A E +  +    L P++VTYS++I GLC   ++D+A ++F  M      P+V+T+ +L
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           I G+ +  +    ++L  +M +  V+ +    +I++
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 144/272 (52%), Gaps = 6/272 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    ++  + K    PD  TF +LI     E R+ EA   + ++     +PD+ TY
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+ GLC  S    A  +F  M +        C P+ VTY+ +I+G CK   V+   +L
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKG------CFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  N VTYT +I+G+C A   N A+ +F  M+  GV PN++T+NV++  LC 
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NGK+++A  +L  M ++G+  D  TYN ++ G C  G V  A +++ S+   G    +++
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           Y+ ++ G  K      A +L+ +M   GI P+
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 20/236 (8%)

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIK--------------------PDVVIHNTLFVGLF 285
           I G+C ++      S Y EML  GI+                    P +   + L   + 
Sbjct: 33  ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           ++ + +    L+++MQ  G+  +  T    ++  C+   +  A+     +  L  E  I 
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            + SL++G C+  R+  AL +F  +      PNVV Y+ +I GLC   Q+D A DL   M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           E++ + P+V+T++ LI G       S    ++  M +  + PD    + ++D   K
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 28/143 (19%), Positives = 67/143 (46%)

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           ++++LF  +   +    I  ++ L+  + K  + ++ + L+  +    +  N+ T +I++
Sbjct: 64  DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
              C   Q+  A      M +    P+++TF  L+ GF R +     + +  +M  +   
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183

Query: 447 PDASIVSIVVDLLAKNEISLNSL 469
           P+  I + ++D L K++   N+L
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNAL 206


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/389 (36%), Positives = 219/389 (56%), Gaps = 6/389 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T   L+   C  S++  A +   K+   G EPD+ T+ +L+NG CR      AL +F+ M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRM 177

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                E G   EPN V Y TIIDGLCK   VD A +LL +M+   I+P+ VTY S+I G 
Sbjct: 178 V----EMGY--EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGL 231

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C +  W++A R+   M  + + P+V TFN ++D   K G++ EA  L + MI+  + PD 
Sbjct: 232 CNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDI 291

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY+ L+ G C+  R++ A+++F  M S GC   V +YSILINGYCK+K++E  + L+ E
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  +G+  + V +  L  G     ++  A ++F  M   GV  +  TY   + GLC NG 
Sbjct: 352 MSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGK 411

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           I +A+ +   ++    + DI  YN +I G+CK+G +  A +L+ SL    L P++ TY+ 
Sbjct: 412 IEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTA 471

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           M+ GL   G   +A  LF  M+E+ ++PN
Sbjct: 472 MMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 209/376 (55%), Gaps = 6/376 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++S     LG+++K    PD VTF SL+ G C   RI +A  +F ++   G EP+V  Y 
Sbjct: 131 QLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYN 190

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+++GLC++     AL+L   M       G+   P+ VTY ++I GLC  G  D A  ++
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEVD----GI--RPDAVTYNSLISGLCNSGRWDDATRMV 244

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  + I P+V T+ ++I         +EA+ L+ EM+ + + P++VT+++++  LC  
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMY 304

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DEA ++   M+  G  PD  TY+ L++G+C + +V H  +LF  M   G      +Y
Sbjct: 305 SRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++LI GYC+  ++  A  ++  M+  G+ P+++ +N L  GL +  ++E+A  +  +MQ+
Sbjct: 365 TVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQK 424

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G+ AD  TY   I G+CK G + +A +L+ +L +     DI  Y +++ GL K G    
Sbjct: 425 SGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGE 484

Query: 363 ALELFRSLPCGVLVPN 378
           A  LFR +    ++PN
Sbjct: 485 ADALFRKMKEDGILPN 500



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 224/432 (51%), Gaps = 6/432 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    F+ L+  +    +      L+ ++++ G   ++ T   L+N  CR S   +AL+ 
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M     E      P+ VT+ ++++G C+   +  A  +  +M +   +PNVV Y ++
Sbjct: 139 LGKMMKLGHE------PDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTI 192

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C +K  + A  L   M   G++P+ VT+N ++  LC +G+ D+A+R++  M +  +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREI 252

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD FT+N L+D     GR++ A+EL+  M        + +YS+LI G C    ++ A  
Sbjct: 253 YPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQ 312

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++  M+SKG  PDVV ++ L  G  +  +VE   KLF EM + GV  +T TY   I G C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYC 372

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G +  A E+F  +       +I  YN L+ GLC +G++E AL +   +    +  ++V
Sbjct: 373 RAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIV 432

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I+I G+C  G++  A DL+  +    + P++ T+  ++ G  +     +   L  KM
Sbjct: 433 TYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKM 492

Query: 441 KEINVMPDASIV 452
           KE  ++P+   V
Sbjct: 493 KEDGILPNECYV 504



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 179/348 (51%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D + +L   M      P++  ++ ++      K ++    L+ +M   G+  N+ T N+
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++  C+  ++  A   L  M++ G  PD  T+ +LL+GFC   R+  A  +F  M  MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            +  V  Y+ +I+G CK+K+++ AL L + M   GI+PD V +N+L  GL    + + A 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           ++   M +  +  D +T+   ID   K G I EA EL+  +     + DI  Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C   RL+ A ++F  +      P+VVTYSI+I G C   +++    LF +M +  VV N 
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +T+ +LI+G+ R  + +   E+   M    V P+    ++++  L  N
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDN 409



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 187/365 (51%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+   ++ ++  + K    D    L  QM+   I  N+ T   ++  FC     + A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +MM  G +P++VTF  +++  C+  ++ +A  + D M++ G  P+   YNT++DG C 
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           + +V++A +L   ME  G +    +Y+ LI+G C +   + A  + S M  + I PDV  
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            N L     +  ++  A +L++EM R  +  D  TY   I GLC    + EA ++F  + 
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C  D+  Y+ LI+G CKS ++E  ++LF  +    +V N VTY+++I G C  G+++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A ++F  M    V PN+IT+++L+ G     +  K + +L  M++  +  D    +I++
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIII 438

Query: 457 DLLAK 461
             + K
Sbjct: 439 RGMCK 443



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 168/321 (52%), Gaps = 2/321 (0%)

Query: 137 YTSVIR-GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           Y  ++R G  Y K  +++  LF  M+     P++  F+ ++  + K  K D    L + M
Sbjct: 49  YREMLRNGIRYMK-LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM 107

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+  +  T N LL+ FC   +++ A      M  +G +  + ++  L+NG+C+   I
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRI 167

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             AL ++  M+  G +P+VVI+NT+  GL +  QV+ A  L + M+ +G+  D  TY + 
Sbjct: 168 YDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSL 227

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I GLC +G   +A  +   +   +   D+  +N+LID   K GR+  A EL+  +    L
Sbjct: 228 ISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL 287

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P++VTYS++I GLC   ++D+A  +F  M      P+V+T+ +LI G+ +  +    ++
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347

Query: 436 LLHKMKEINVMPDASIVSIVV 456
           L  +M +  V+ +    ++++
Sbjct: 348 LFCEMSQRGVVRNTVTYTVLI 368



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 125/233 (53%), Gaps = 6/233 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S    +   +++    PD VT++ LI GLC  SR+ EA  +F  +   GC PDV TY
Sbjct: 270 GRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTY 329

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+NG C++      + LF EM+    + GVV   NTVTYT +I G C+ G ++ A+E+
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMS----QRGVV--RNTVTYTVLIQGYCRAGKLNVAEEI 383

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M    + PN++TY  ++ G C      +A  +  +M   G+  ++VT+N+I+  +CK
Sbjct: 384 FKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCK 443

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
            G++ +A  L   +   G+ PD +TY  ++ G    G    A  LF  M+  G
Sbjct: 444 AGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDG 496



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 149/305 (48%), Gaps = 4/305 (1%)

Query: 178 ELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           E+ +NG    K+D++  L   M+Q    P    ++ LL       + +    L+  M+ +
Sbjct: 51  EMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G  H + + +IL+N +C+  ++  ALS   +M+  G +PD+V   +L  G     ++  A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             +FD M   G   +   Y T IDGLCK+  +  A++L + + +     D   YNSLI G
Sbjct: 171 LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG 230

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LC SGR + A  +   +    + P+V T++ +I     +G++ +A +L+ +M   ++ P+
Sbjct: 231 LCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPD 290

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           ++T+ +LI G    +   +  ++   M      PD    SI+++   K++   + +  F 
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350

Query: 474 VHEQQ 478
              Q+
Sbjct: 351 EMSQR 355



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 55/266 (20%)

Query: 246 INGYCKNKEIEGALSLYSEMLSKGI----------------------------------- 270
           I G C ++      S Y EML  GI                                   
Sbjct: 33  ICGLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92

Query: 271 ---KPDVVIH-----------------NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
              K DVVI+                 N L        Q+  A     +M + G   D  
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIV 152

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           T+ + ++G C+   I +A+ +F  +  +  E ++  YN++IDGLCKS +++ AL+L   +
Sbjct: 153 TFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               + P+ VTY+ +I GLCN G+ D A  +   M +  + P+V TF+ LI   ++    
Sbjct: 213 EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRI 272

Query: 431 SKVIELLHKMKEINVMPDASIVSIVV 456
           S+  EL  +M   ++ PD    S+++
Sbjct: 273 SEAEELYEEMIRRSLDPDIVTYSLLI 298


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 159/509 (31%), Positives = 253/509 (49%), Gaps = 63/509 (12%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD---------------- 57
           I KSC  PDA TF  L++GLC  +++ +A  L  +++  GC PD                
Sbjct: 34  IDKSC-QPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKD 92

Query: 58  -------------------VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
                              V TYT +V+GLC+   T  A+ L +EM +        C PN
Sbjct: 93  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKG------CSPN 146

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
             TY  I++GLC+E  +D+AK++L +M  +   P+VVTY S I+G C     +EA++   
Sbjct: 147 IYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLA 206

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            M    V P+VV++  +++ LCK+G +D ASR+LD M   G  PD  TY++L+DGFC  G
Sbjct: 207 RM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGG 263

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            V  A  L  SM  +GC+  + +Y+ L+    +   I  A  +  EM  +G  PDVV +N
Sbjct: 264 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 323

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI----------DGLCKNGYIVEA 328
               GL +  +V++A  +FD M   G   +  +Y   I          DGLCK G   EA
Sbjct: 324 ACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEA 383

Query: 329 VELFHTLRILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSL---PCGVLVPNVVTYSI 384
             LF  +   K CE D+  YN ++D  CK  +++ AL++ + +    C     NVVT++I
Sbjct: 384 CALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC----NVVTWNI 439

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           ++ GLC D ++  A  + L M +   +P+ +T+  L+    +  + +  +EL  +  +  
Sbjct: 440 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 499

Query: 445 VMPDASIVSIVVDLLAKNEISLNSLPSFT 473
            +PD    S ++  L    ++  +   FT
Sbjct: 500 CVPDVVTYSALITGLVHENMAEEAYLLFT 528



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 156/494 (31%), Positives = 241/494 (48%), Gaps = 44/494 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +  +  T+  L+  L  E R  +A+A+F ++    C+PD FT+  L+ GLCR++    A 
Sbjct: 3   YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKAR 62

Query: 79  NLFEEMA------------------NGNGEFGVV-----------CEPNTVTYTTIIDGL 109
            L   M                   +   +FG             C P  VTYT I+DGL
Sbjct: 63  KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGL 122

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           CK      A +LL +M+DK   PN+ TY  ++ G C  +  +EAK++  EM  +G  P+V
Sbjct: 123 CKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDV 182

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           VT+N  +  LCK  ++DEA + L  M    V PD  +Y T+++G C +G ++ A  +   
Sbjct: 183 VTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDH 239

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M + GC   V +YS LI+G+CK  E+E A+ L   ML  G +P++V +N+L   L  +  
Sbjct: 240 MSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 299

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE-------- 341
           + +A  +  EM+R G   D  +Y   IDGLCK   + +A  +F  +    C         
Sbjct: 300 IGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSM 359

Query: 342 --FDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
              DI  Y  L+DGLCK GR + A  LF + L   +  P+V  Y++M+   C   Q+DKA
Sbjct: 360 LIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 419

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             +   M E     NV+T+++L+ G    +  S    +L  M +   +PD      +VD 
Sbjct: 420 LQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 478

Query: 459 LAKNEISLNSLPSF 472
           + K   S  +L  F
Sbjct: 479 MCKCGKSAAALELF 492



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 194/370 (52%), Gaps = 9/370 (2%)

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
            G E +VFTY  L+  L R      A  +F+EM + +      C+P+  T+  ++ GLC+
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKS------CQPDAFTFAILLRGLCR 54

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
              ++KA++LL +MK+    P+   Y ++I G+  AKD+ +A +   EM+     P VVT
Sbjct: 55  SNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVT 114

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  I+D LCK  +  +A +LLD M   G  P+ +TYN +++G C   +++ AK++   M 
Sbjct: 115 YTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 174

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G    V +Y+  I G CK   ++ A    + M    + PDVV + T+  GL +   ++
Sbjct: 175 VRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLD 231

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A ++ D M   G   D  TY + IDG CK G +  A+ L  ++  L C  ++ AYNSL+
Sbjct: 232 SASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLL 291

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
             L + G +  A ++   +      P+VV+Y+  I GLC   ++ KA+ +F  M E    
Sbjct: 292 GALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCT 351

Query: 412 PNVITFDMLI 421
           PN  ++ MLI
Sbjct: 352 PNASSYSMLI 361



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 150/285 (52%), Gaps = 3/285 (1%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G + NV T+N ++ +L +  + D+AS +   MI    +PDAFT+  LL G C + ++  A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           ++L   M+ MGC      Y+ LI+GY K K+   A    +EM+     P VV +  +  G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L +  +   A KL DEM+  G + + +TY   ++GLC+   + EA ++   + +     D
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  YNS I GLCK  R++ A +    +P   + P+VV+Y+ +I GLC  G +D A  +  
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            M      P+V+T+  LI GF +  E  + + LL  M ++   P+
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPN 283



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 133/299 (44%), Gaps = 51/299 (17%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TPD VT++SLI G C    +  A  L   +   GC P++  Y +L+  L R  H   A +
Sbjct: 246 TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAED 305

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN------ 133
           +  EM            P+ V+Y   IDGLCK   V KAK +  +M ++   PN      
Sbjct: 306 MLVEMERRGFT------PDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSM 359

Query: 134 ----VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEA 188
               ++ YT ++ G C    ++EA  LF +++D+ + +P+V  +NV++D  CK  ++D+A
Sbjct: 360 LIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 419

Query: 189 ----------------------------SRLLDL------MIQHGVRPDAFTYNTLLDGF 214
                                        RL D       M+  G  PD  TY TL+D  
Sbjct: 420 LQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAM 479

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           C  G+   A ELF      GC   V +YS LI G       E A  L+++++ +   PD
Sbjct: 480 CKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPD 538



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 16/240 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP---- 56
           +G +     +L  + +  FTPD V++ + I GLC   R+ +A A+F ++   GC P    
Sbjct: 297 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 356

Query: 57  ------DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC 110
                 D+  YT L++GLC+      A  LF ++ +       +CEP+   Y  ++D  C
Sbjct: 357 YSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK-----ICEPDVFFYNVMLDSHC 411

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K   +DKA ++  QM +KN   NVVT+  ++ G C     ++A+ + + M+D+G  P+ V
Sbjct: 412 KRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFV 470

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T+  ++D +CK GK   A  L +  ++ G  PD  TY+ L+ G         A  LF  +
Sbjct: 471 TYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 530



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 113/264 (42%), Gaps = 38/264 (14%)

Query: 233 MGCKHTVFSY-----------------------------------SILINGYCKNKEIEG 257
           MG +H VF+Y                                   +IL+ G C++ ++E 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L   M   G  PD  I+N L  G  +     +AFK   EM +N       TY   +D
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLCK     +AV+L   +R   C  +I  YN +++GLC+  +L+ A ++   +      P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +VVTY+  I GLC   ++D+AR     M    V P+V+++  +I G  +  +      +L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 438 HKMKEINVMPDASIVSIVVDLLAK 461
             M      PD    S ++D   K
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCK 261


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 152/456 (33%), Positives = 239/456 (52%), Gaps = 6/456 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V    ++L +I +   +PD  T+TSLI G C    +  A  +F ++   GC+P+  TY
Sbjct: 212 GKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTY 271

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NGLC       AL++ EEM     E G+  EP   TYT  I  LC     ++A EL
Sbjct: 272 STLINGLCNEGRVDEALDMLEEMI----EKGI--EPTVYTYTLPITALCAIEHEEEAIEL 325

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +MK +  +PNV TYT++I G         A  L+ +M+ +G+ PN VT+N +++ELC 
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+   A ++   M  HG   +  TYN ++ G CL G +  A  LF  M  MG   TV +
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LINGY     +  A  L   M   G +PD   +N L  G  +  ++E A   F EM 
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  +Y   IDG  K+G +  A+ L   +  + C  ++ +YN++I+GL K  R  
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++   +    L+PNV+TY+ +I GLC +G+   A  +F DME+   +PN+ T+  LI
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            G  +  +  +   LL +M+   + PD    + ++D
Sbjct: 626 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 661



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/423 (34%), Positives = 223/423 (52%), Gaps = 6/423 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +++    P   T+T  I  LCA     EA  L  +++  GC P+V TY
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 341

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GL R     VA+ L+ +M       G+V  PNTVTY  +I+ LC  G    A ++
Sbjct: 342 TALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNALINELCVGGRFSTALKI 395

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M+      N  TY  +I+G C   D  +A  LF +M+  G  P VVT+N +++    
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++ A+RLLDLM ++G  PD +TYN L+ GF   G++  A   F  M   G      S
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+ K+ +++ ALSL   M   G  P+V  +N +  GL + ++   A K+ D+M 
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY T IDGLC+NG    A ++FH +   KC  ++  Y+SLI GLC+ G+ +
Sbjct: 576 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 635

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L + +    L P+ VT++ +I G    G++D A  L   M +    PN  T+ +L+
Sbjct: 636 EAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLL 695

Query: 422 RGF 424
           +G 
Sbjct: 696 KGL 698



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 186/359 (51%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           T++  L K   V+ A+ L  QM +  I+P+++T+ ++I          EA+ +  ++   
Sbjct: 168 TLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQY 227

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
            + P+V T+  ++   C+N  +D A  + D M++ G  P++ TY+TL++G C  GRV+ A
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            ++   M   G + TV++Y++ I   C  +  E A+ L + M  +G +P+V  +  L  G
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 347

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L  + ++E A  L+ +M + G+  +T TY   I+ LC  G    A+++FH +       +
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 407

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
            + YN +I GLC  G +E A+ LF  +     +P VVTY+ +I G    G ++ A  L  
Sbjct: 408 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 467

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            M+EN   P+  T++ L+ GF +  +         +M E  + P+    + ++D  +K+
Sbjct: 468 LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 157/326 (48%), Gaps = 6/326 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +   +       +  T+  +IKGLC    I +A  LF K+   G  P V TY
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG     +   A  L + M   NG     CEP+  TY  ++ G  K G ++ A   
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKE-NG-----CEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +  + PN V+YT++I G       + A  L   M + G  PNV ++N +++ L K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +  EA ++ D M++ G+ P+  TY TL+DG C  GR   A ++F  ME   C   +++
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI G C+  + + A  L  EM  KG+ PD V   +L  G   + +++ AF L   M 
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVE 327
             G   +  TY   + GL K   ++E
Sbjct: 681 DMGCKPNYRTYSVLLKGLQKECLLLE 706



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 155/299 (51%)

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           E+   G   ++ + N ++ +L K   ++ A  L   M+  G++P   T+NTL++     G
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           +V  A+ +   +        VF+Y+ LI G+C+N+ ++ A  ++  M+ +G  P+ V ++
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           TL  GL    +V+ A  + +EM   G+    +TY   I  LC   +  EA+EL   ++  
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            C  +++ Y +LI GL + G+LE+A+ L+  +    LVPN VTY+ +I  LC  G+   A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +F  ME +  + N  T++ +I+G     +  K + L  KM ++  +P     + +++
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 451



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 123/230 (53%)

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           +  MG   +++S + L+    K + +EGA +LY +ML+ GI+P ++  NTL   L +  +
Sbjct: 154 ISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 213

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V  A  +  ++ +  ++ D +TY + I G C+N  +  A  +F  +    C+ +   Y++
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 273

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+GLC  GR++ AL++   +    + P V TY++ I  LC     ++A +L   M++  
Sbjct: 274 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 333

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             PNV T+  LI G  R+ +    I L HKM +  ++P+    + +++ L
Sbjct: 334 CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 40/243 (16%)

Query: 222 HAKELFVSMESMGCKHTVFSYS----ILINGYCKNKE-IEGALSLYSEMLSKGIKPDVVI 276
           H    F+SM +   +  VF+ +    IL+   C+N+E I       +E+   G    +  
Sbjct: 106 HNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYS 165

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            NTL + L +   VE A  L+ +M  +G+     T+                        
Sbjct: 166 CNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF------------------------ 201

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                      N+LI+ L K G++  A  +   +    L P+V TY+ +I G C +  +D
Sbjct: 202 -----------NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 250

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  +F  M +    PN +T+  LI G        + +++L +M E  + P     ++ +
Sbjct: 251 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310

Query: 457 DLL 459
             L
Sbjct: 311 TAL 313


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 139/405 (34%), Positives = 224/405 (55%), Gaps = 18/405 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F VL +ILK  + PD +T  + IKG C + +I +A     KL   G   D  +
Sbjct: 116 LGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVS 175

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  AL L   +       G + + N V Y T+IDG+ K+  V+ A +
Sbjct: 176 YGTLINGLCKVGETRAALQLLRRVD------GKLVQLNAVMYNTVIDGMSKDKHVNDAFD 229

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+VVTY+++IRGF       +A  LF +M+ + ++P+V TFN+++D  C
Sbjct: 230 LYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFC 289

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ +A  +LD+M+   ++P+  T+NTL+DGFC   ++   K +F  M   G K  V 
Sbjct: 290 KEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVV 349

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  L++GYC  K++  A  +++ M  +G+  +V  +N +  G  +I +V++A KLF EM
Sbjct: 350 TYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEM 409

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +  D  TY + IDGLCK+G I  A +L + +       +I  YNS+++        
Sbjct: 410 HHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNA------- 462

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
                L   L    + PN+ T +I+I GLC  G+++ AR +F D+
Sbjct: 463 -----LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDL 502



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 187/361 (51%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           +  I+  L K         L  QM+ + I PN VT+  +I  FC       A  +  +++
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
             G +P+++T N  +   C  G++ +A    D ++  G   D  +Y TL++G C  G   
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A +L   ++    +     Y+ +I+G  K+K +  A  LYSEM++K I PDVV ++ L 
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G F + +++ A  LF++M    +  D +T+   +DG CK G + +A  +   + I   +
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  +N+L+DG CK  +++    +F  +    + PNVVTY  ++ G C   Q++KA+ +
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 370

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F  M +  V  NV +++++I GF +I +  K ++L  +M   +++PD    + ++D L K
Sbjct: 371 FNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCK 430

Query: 462 N 462
           +
Sbjct: 431 S 431



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 217/437 (49%), Gaps = 18/437 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           T  A  F  ++  L          +L  ++   G  P+  T+  L+N  C+      A +
Sbjct: 65  TLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFS 124

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  ++        +  EP+ +T  T I G C +G + +A     ++       + V+Y +
Sbjct: 125 VLAKI------LKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGT 178

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C   +   A +L   +  + VQ N V +N ++D + K+  +++A  L   M+   
Sbjct: 179 LINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKR 238

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD  TY+ L+ GF + G++  A +LF  M     K  V++++IL++G+CK   ++ A 
Sbjct: 239 ISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAK 298

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           ++   M+ + IKP+V   NTL  G  +  +++    +F  M + G+  +  TY + +DG 
Sbjct: 299 NVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 358

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C    + +A ++F+T+       ++ +YN +I+G CK  +++ A++LF  +    ++P+V
Sbjct: 359 CLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDV 418

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTY+ +I GLC  G++  A  L  +M +    PN+IT++ ++              LL K
Sbjct: 419 VTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNA------------LLTK 466

Query: 440 MKEINVMPDASIVSIVV 456
           +K+  + P+    +I++
Sbjct: 467 LKDQGIQPNMHTDTILI 483



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 217/421 (51%), Gaps = 7/421 (1%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A +LF  L         F +  ++  L ++ H    L+L ++M     EF  +  PN VT
Sbjct: 52  AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQM-----EFEGI-NPNFVT 105

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           +  +I+  C+ G +  A  +L ++     +P+++T  + I+GFC     ++A     +++
Sbjct: 106 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLV 165

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
             G   + V++  +++ LCK G+   A +LL  +    V+ +A  YNT++DG      VN
Sbjct: 166 ALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVN 225

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A +L+  M +      V +YS LI G+    +++ A+ L+++M+ + IKPDV   N L 
Sbjct: 226 DAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 285

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G  +  ++++A  + D M    +  +  T+ T +DG CK+  + E   +F  +     +
Sbjct: 286 DGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIK 345

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  Y SL+DG C   ++  A ++F ++    +  NV +Y+IMI G C   ++DKA  L
Sbjct: 346 PNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKL 405

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVDLLA 460
           F++M    ++P+V+T++ LI G  +  + S   +L+++M +    P+  +  SI+  LL 
Sbjct: 406 FIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLT 465

Query: 461 K 461
           K
Sbjct: 466 K 466



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 186/368 (50%), Gaps = 1/368 (0%)

Query: 90  EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
            F ++ + N + Y++I         VD A  L   +  +N       +  ++     +K 
Sbjct: 25  SFLILLQKNFIPYSSISTTFHSND-VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKH 83

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
           ++    L  +M  +G+ PN VTFN++++  C+ G +  A  +L  +++ G  PD  T NT
Sbjct: 84  YHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNT 143

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
            + GFCL G+++ A      + ++G      SY  LING CK  E   AL L   +  K 
Sbjct: 144 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKL 203

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           ++ + V++NT+  G+ +   V  AF L+ EM    ++ D  TY   I G    G + +A+
Sbjct: 204 VQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAI 263

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           +LF+ + +   + D+  +N L+DG CK GRL+ A  +   +    + PNV T++ ++ G 
Sbjct: 264 DLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGF 323

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C D +M + + +F  M +  + PNV+T+  L+ G+  + + +K  ++ + M +  V  + 
Sbjct: 324 CKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANV 383

Query: 450 SIVSIVVD 457
              +I+++
Sbjct: 384 HSYNIMIN 391



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 29/289 (10%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            V+  F +   ++    +PD VT+++LI+G     ++ +A  LF K+ +   +PDV+T+ 
Sbjct: 223 HVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFN 282

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LV+G C+      A N+ + M   +       +PN  T+ T++DG CK+  + + K + 
Sbjct: 283 ILVDGFCKEGRLKKAKNVLDMMMIQD------IKPNVSTFNTLVDGFCKDRKMKEGKTVF 336

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  + IKPNVVTY S++ G+C  K  N+AK++F  M  +GV  NV ++N++++  CK 
Sbjct: 337 AMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKI 396

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K+D+A +L   M    + PD  TYN+L+DG C +G++++A +L   M   G    + +Y
Sbjct: 397 KKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITY 456

Query: 243 -----------------------SILINGYCKNKEIEGALSLYSEMLSK 268
                                  +ILI G C++ ++E A  ++ ++L K
Sbjct: 457 NSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 1/299 (0%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           +Q N + ++ I      N  +D A  L + ++       AF +N +L     +   +   
Sbjct: 30  LQKNFIPYSSISTTFHSND-VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            L   ME  G      +++ILIN +C+   I  A S+ +++L  G +PD++  NT   G 
Sbjct: 89  SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               Q+ +A    D++   G   D  +Y T I+GLCK G    A++L   +     + + 
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNA 208

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN++IDG+ K   +  A +L+  +    + P+VVTYS +I G    G++  A DLF  
Sbjct: 209 VMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNK 268

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           M    + P+V TF++L+ GF +     K   +L  M   ++ P+ S  + +VD   K+ 
Sbjct: 269 MILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDR 327


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 150/465 (32%), Positives = 236/465 (50%), Gaps = 21/465 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT------YTTLVNGLCRTSH 73
            PD V++ +++ GLC   R+ EA  LF    +        +      Y  ++ GLC+   
Sbjct: 244 APDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDR 303

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A+ +FE+M   N        P++ +Y  +IDGL K G ++ A+ L  ++    + P+
Sbjct: 304 IDEAVQMFEKMNERN------VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS 357

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            V YTS+I G C A  +++A+ LF +M  +G  P+ VT+NV++D  CK G ++EA  L+ 
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK 417

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            MI+ G  PD  TYNT++DG C + RV  A  LF  ME +GC     S++ +I G C+  
Sbjct: 418 KMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS 477

Query: 254 EIEGA---------LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+ A           L   M   G  PDVV ++TL  GL  I +V+ A  L ++M +  
Sbjct: 478 KIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 537

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
                 T  T I GLCK G I EA E+   +       D+  YN+L+ G C++G+ E A 
Sbjct: 538 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 597

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           EL   +    L PNVVTY+ ++ GLC   ++ +A  +F  M+ +   PN+ T+  LI GF
Sbjct: 598 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 657

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
               +    ++L  +M    + PD  +   +   L K+  S  +L
Sbjct: 658 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 702



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 208/398 (52%), Gaps = 15/398 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD+ ++  LI GL    ++ +A  LF KL   G  P    YT+L++GLC  +    A  
Sbjct: 320 SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 379

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF +M N  G     C P+ VTY  +ID  CK G +++A +L+ +M +    P+VVTY +
Sbjct: 380 LFADM-NRRG-----CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM---------DELCKNGKMDEASR 190
           V+ G C +    EA  LF EM   G  PN  + N I+         D+ C+ GK+DEA R
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFR 493

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           LL  M   G  PD  TY+TL+ G C   RV+ A+ L   M    CK TV + + LI+G C
Sbjct: 494 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 553

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K   I+ A  +   M+S G  PDVV +NTL  G     Q ERA +L  +M   G+A +  
Sbjct: 554 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 613

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY   + GLCK   + EA  +F  ++   C  ++  Y +LI G C +G+++  L+LF  +
Sbjct: 614 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 673

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            C  + P+ V Y  +   LC  G+  +A ++  +  E+
Sbjct: 674 VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 711



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/444 (31%), Positives = 219/444 (49%), Gaps = 52/444 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP----- 56
           G+++    +  ++L S  TP  V +TSLI GLC  +   +A  LF  +   GC P     
Sbjct: 337 GKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTY 396

Query: 57  ------------------------------DVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
                                         DV TY T+++GLC++S    AL LF EM  
Sbjct: 397 NVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER 456

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKE---------GFVDKAKELLLQMKDKNIKPNVVTY 137
                 + C PN  ++ TII GLC++         G +D+A  LL +M D    P+VVTY
Sbjct: 457 ------LGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTY 510

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           +++I G C     ++A+ L  +M+ +  +P VVT N ++  LCK G++ EA  +LD M+ 
Sbjct: 511 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 570

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G  PD  TYNTL+ G C  G+   A+EL   M + G    V +Y+ L++G CK   +  
Sbjct: 571 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE 630

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  ++++M S G  P++  +  L +G     QV+   KLF EM   G++ D   Y T   
Sbjct: 631 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 690

Query: 318 GLCKNGYIVEAVELFHTLR-ILKCE-FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
            LCK+G    A+E+    R  L+ E +    Y   +DGL ++G++E+AL   R +  G  
Sbjct: 691 ELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQ 750

Query: 376 VPNVVTYSIMIGGLCNDGQMDKAR 399
           +P     + ++ GLC  GQ  +AR
Sbjct: 751 LPAPERCASLVAGLCKSGQGGEAR 774



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 222/449 (49%), Gaps = 22/449 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P  + FTS+I+G C   R  EA  +F+ +       PDV  Y  L++ L +   T     
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQETEAVKK 65

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + + M +        C P++ T+TTI+ GLCK G +D+A+ ++ +M+ + I P   T + 
Sbjct: 66  MVQVMVDRG------CFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +    C       A +L +E+M      N   +N+++  LCK  ++D+A  L   M +  
Sbjct: 120 LAHELCLRGSMERAFQL-LEIMPVA---NSSAYNIVVVALCKAARVDDALELARTMSEKR 175

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           +   A + +++L G   +GR++ A +++       C   + + ++L+ G+C   +++ A 
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPC---LVTLNVLLEGFCSRGQVDKAR 232

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT------YR 313
            L   M  +   PD V + T+  GL +  +VE A +LF + +    ++ + +      Y 
Sbjct: 233 ELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYN 292

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I GLC+N  I EAV++F  +       D  +Y  LIDGL K+G+L  A  LF+ L   
Sbjct: 293 IVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS 352

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + P+ V Y+ +I GLC     D AR+LF DM      P+ +T++++I    +     + 
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 412

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +L+ KM E   +PD    + V+D L K+
Sbjct: 413 CDLIKKMIEDGHVPDVVTYNTVMDGLCKS 441



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 165/337 (48%), Gaps = 25/337 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F +L R+      PD VT+++LI GLC+ +R+ +A  L   +    C+P V T 
Sbjct: 486 GKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 545

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++GLC+      A  + + M + +G+      P+ VTY T++ G C+ G  ++A+EL
Sbjct: 546 NTLIHGLCKAGRIKEAREVLDAMVS-SGQ-----SPDVVTYNTLVHGHCRAGQTERAREL 599

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  + + PNVVTYT+++ G C A    EA  +F +M   G  PN+ T+  ++   C 
Sbjct: 600 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 659

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV----SMESMGCKH 237
            G++D   +L   M+  G+ PD   Y TL    C +GR   A E+      S+ S     
Sbjct: 660 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGD 719

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            V+ ++  ++G  +  ++E AL    +M+  G  P      +L  GL +  Q   A  + 
Sbjct: 720 EVYRFA--VDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 777

Query: 298 DEM-------QRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +E+       +  G AA       F++ +   GY +E
Sbjct: 778 EEIMDLAYGGKARGKAA------KFVEEMVGKGYEIE 808



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 173/407 (42%), Gaps = 70/407 (17%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M  + I P  + +TSVI+G+C      EA ++F  +M++   P    +NV++D L K  +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIF-SLMEECHSPYPDVYNVLIDSLSKRQE 59

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES------------ 232
            +   +++ +M+  G  PD+FT+ T+L G C  G+++ A+ +   M S            
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 233 -------MGCKHTVF------------SYSILINGYCKNKEIEGALSLYSEMLSKGI--- 270
                   G     F            +Y+I++   CK   ++ AL L   M  K I   
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLA 179

Query: 271 -----------------------------KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
                                        +P +V  N L  G     QV++A +L   M 
Sbjct: 180 AGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMP 239

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI------LKCEFDIRAYNSLIDGLC 355
               A D  +Y T +DGLCK G + EAV LF    +            +R YN +I GLC
Sbjct: 240 DEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLC 299

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           ++ R++ A+++F  +    + P+  +Y I+I GL   G+++ AR+LF  +  + V P+ +
Sbjct: 300 QNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTV 359

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +  LI G    N      EL   M      P     ++++D   K 
Sbjct: 360 AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKR 406



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 16/272 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV     +L  ++K    P  VT  +LI GLC   RI EA  +   +   G  PDV T
Sbjct: 520 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 579

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y TLV+G CR   T  A  L  +M A G         PN VTYT ++ GLCK   + +A 
Sbjct: 580 YNTLVHGHCRAGQTERARELLSDMVARG-------LAPNVVTYTALVSGLCKANRLPEAC 632

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  QMK     PN+ TYT++I GFC A   +   +LF EM+  G+ P+ V +  +  EL
Sbjct: 633 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 692

Query: 180 CKNGKMDEASRLLDLMIQ--HGVRPDAF---TYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           CK+G+   ++R L+++ +    +R +A+    Y   +DG    G++  A      M   G
Sbjct: 693 CKSGR---SARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGG 749

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                   + L+ G CK+ +   A ++  E++
Sbjct: 750 QLPAPERCASLVAGLCKSGQGGEARAVLEEIM 781


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 149/446 (33%), Positives = 239/446 (53%), Gaps = 10/446 (2%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++L S   P  +TF +LI  L  + ++ EA  + +++  +   PDVFTYT+L+ G CR  
Sbjct: 188 QMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNR 247

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           +  +A  +F+ M          C+PN+VTY+T+I+GLC EG VD+A ++L +M +K I+P
Sbjct: 248 NLDLAFGVFDRMVKEG------CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            V TYT  I   C  +   EA  L   M  +G +PNV T+  ++  L + GK++ A  L 
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 361

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M++ G+ P+  TYN L++  C+ GR + A ++F  ME  G      +Y+ +I G C  
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +IE A+ L+ +ML  G  P VV +NTL  G      V  A +L D M+ NG   D WTY
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR--AYNSLIDGLCKSGRLEIALELFRSL 370
              + G  K G +  A   F+   +++C  +    +Y +LIDG  K G+++IAL L + +
Sbjct: 482 NELVSGFSKWGKLESAS--FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                 PNV +Y+ +I GL  + +  +A  +   M E  ++PNVIT+  LI G  R    
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 431 SKVIELLHKMKEINVMPDASIVSIVV 456
               ++ H M++   +P+    S ++
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLI 625



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 153/460 (33%), Positives = 237/460 (51%), Gaps = 10/460 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V    ++L +I +   +PD  T+TSLI G C    +  A  +F ++   GC+P+  TY
Sbjct: 212 GKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTY 271

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NGLC       AL++ EEM     E G+  EP   TYT  I  LC     ++A EL
Sbjct: 272 STLINGLCNEGRVDEALDMLEEMI----EKGI--EPTVYTYTLPITALCAIEHEEEAIEL 325

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +MK +  +PNV TYT++I G         A  L+ +M+ +G+ PN VT+N +++ELC 
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+   A ++   M  HG   +  TYN ++ G CL G +  A  LF  M  MG   TV +
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LINGY     +  A  L   M   G +PD   +N L  G  +  ++E A   F EM 
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  +Y   IDG  K+G +  A+ L   +  + C  ++ +YN++I+GL K  R  
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++   +    L+PNV+TY+ +I GLC +G+   A  +F DME+   +PN+ T+  LI
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G  +  +  +      +M EI   P     S +V  L +
Sbjct: 626 YGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCR 661



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 249/535 (46%), Gaps = 72/535 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +++    P   T+T  I  LCA     EA  L  +++  GC P+V TY
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 341

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GL R     VA+ L+ +M       G+V  PNTVTY  +I+ LC  G    A ++
Sbjct: 342 TALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNALINELCVGGRFSTALKI 395

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M+      N  TY  +I+G C   D  +A  LF +M+  G  P VVT+N +++    
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++ A+RLLDLM ++G  PD +TYN L+ GF   G++  A   F  M   G      S
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+ K+ +++ ALSL   M   G  P+V  +N +  GL + ++   A K+ D+M 
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC--------------------- 340
             G+  +  TY T IDGLC+NG    A ++FH +   KC                     
Sbjct: 576 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 635

Query: 341 ----------EFDIRAYNSLIDGLCKSGR------------------------------- 359
                     E  +  Y++L+ GLC+ GR                               
Sbjct: 636 EAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC 695

Query: 360 --LEI--ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             LE+  AL++F S+       ++  Y  +I  LC  GQ+++A+ LF +M E     + I
Sbjct: 696 KNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEI 755

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            + +L+ G ++  E    ++LLH M+  N  P+     I+   L++   S+ S P
Sbjct: 756 VWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEP 810



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 212/440 (48%), Gaps = 10/440 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +   +       +  T+  +IKGLC    I +A  LF K+   G  P V TY
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG     +   A  L + M   NG     CEP+  TY  ++ G  K G ++ A   
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKE-NG-----CEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +  + PN V+YT++I G       + A  L   M + G  PNV ++N +++ L K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +  EA ++ D M++ G+ P+  TY TL+DG C  GR   A ++F  ME   C   +++
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI G C+    EG       M   G +P +  ++TL  GL    +   A +L  +M+
Sbjct: 621 YSSLIYGLCQ----EGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 676

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D   Y + +   CKN  +  A+++FH++     +  +  Y +LI  LCK+G++E
Sbjct: 677 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 736

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF ++       + + +++++ GL  +G++D    L   ME     PN+ T+ +L 
Sbjct: 737 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILG 796

Query: 422 RGFIRINEPSKVIELLHKMK 441
           R   RI +  +   L  K+K
Sbjct: 797 RELSRIGKSIESEPLADKLK 816



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 186/359 (51%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           T++  L K   V+ A+ L  QM +  I+P+++T+ ++I          EA+ +  ++   
Sbjct: 168 TLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQY 227

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
            + P+V T+  ++   C+N  +D A  + D M++ G  P++ TY+TL++G C  GRV+ A
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            ++   M   G + TV++Y++ I   C  +  E A+ L + M  +G +P+V  +  L  G
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 347

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L  + ++E A  L+ +M + G+  +T TY   I+ LC  G    A+++FH +       +
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 407

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
            + YN +I GLC  G +E A+ LF  +     +P VVTY+ +I G    G ++ A  L  
Sbjct: 408 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 467

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            M+EN   P+  T++ L+ GF +  +         +M E  + P+    + ++D  +K+
Sbjct: 468 LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 173/338 (51%), Gaps = 10/338 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++         +++    P+ V++T+LI G   + ++  A +L  ++   GC P+V +Y
Sbjct: 492 GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NGL + +    A  + ++M     E G++  PN +TYTT+IDGLC+ G    A ++
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMV----EQGLL--PNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M+ +   PN+ TY+S+I G C     +EA+R    M + G +P + T++ ++  LC+
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCR 661

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+  EA +L+  M + G  PD   Y +LL   C    V+HA ++F S+E+ G +  +  
Sbjct: 662 KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSI 721

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LI   CK  ++E A +L+  ML K    D ++   L  GL +  +++   KL   M+
Sbjct: 722 YRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIME 781

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
                 +  TY      L + G  +E+  L   L++LK
Sbjct: 782 SKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLK 819



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 151/289 (52%)

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           E+   G   ++ + N ++ +L K   ++ A  L   M+  G++P   T+NTL++     G
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           +V  A+ +   +        VF+Y+ LI G+C+N+ ++ A  ++  M+ +G  P+ V ++
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           TL  GL    +V+ A  + +EM   G+    +TY   I  LC   +  EA+EL   ++  
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            C  +++ Y +LI GL + G+LE+A+ L+  +    LVPN VTY+ +I  LC  G+   A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
             +F  ME +  + N  T++ +I+G     +  K + L  KM ++  +P
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLP 441



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 123/230 (53%)

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           +  MG   +++S + L+    K + +EGA +LY +ML+ GI+P ++  NTL   L +  +
Sbjct: 154 ISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 213

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V  A  +  ++ +  ++ D +TY + I G C+N  +  A  +F  +    C+ +   Y++
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 273

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+GLC  GR++ AL++   +    + P V TY++ I  LC     ++A +L   M++  
Sbjct: 274 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 333

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             PNV T+  LI G  R+ +    I L HKM +  ++P+    + +++ L
Sbjct: 334 CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 40/243 (16%)

Query: 222 HAKELFVSMESMGCKHTVFSYS----ILINGYCKNKE-IEGALSLYSEMLSKGIKPDVVI 276
           H    F+SM +   +  VF+ +    IL+   C+N+E I       +E+   G    +  
Sbjct: 106 HNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYS 165

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            NTL + L +   VE A  L+ +M  +G+     T+                        
Sbjct: 166 CNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF------------------------ 201

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                      N+LI+ L K G++  A  +   +    L P+V TY+ +I G C +  +D
Sbjct: 202 -----------NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 250

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  +F  M +    PN +T+  LI G        + +++L +M E  + P     ++ +
Sbjct: 251 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310

Query: 457 DLL 459
             L
Sbjct: 311 TAL 313


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 242/430 (56%), Gaps = 14/430 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP--DVFTYTTLVNGLCRTSHTIVAL 78
           P+ +T  +++   C    +  A   F  +R+  CEP  D+FTYT+LV G CR        
Sbjct: 187 PNLITLNTMLNSYCKLGNMAVARLFF--VRILRCEPGPDLFTYTSLVLGYCRN------- 237

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
              +++    G F V+   N V+YT +I GLC+ G + +A E   +M++    P V TYT
Sbjct: 238 ---DDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYT 294

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            ++   C +    EA  LF EM ++G +PNV T+ V++D LCK G+MDEA ++L+ M++ 
Sbjct: 295 VLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEK 354

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV P    +N L+  +C  G +  A  +   MES      V +Y+ LI G+C+ K ++ A
Sbjct: 355 GVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRA 414

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           ++L ++M+   + PDVV +NTL  GL E+  V+ A +LF  M R+G + D WT+  F+  
Sbjct: 415 MALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVC 474

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LC+ G + EA ++  +L+    + +  AY +LIDG CK+G++E A  LF+ +     +PN
Sbjct: 475 LCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPN 534

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            +T+++MI GL  +G++  A  L  DM +  V P + T+++L+   ++  +  +  E+L+
Sbjct: 535 SITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILN 594

Query: 439 KMKEINVMPD 448
           ++      P+
Sbjct: 595 RLISSGYQPN 604



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/478 (31%), Positives = 236/478 (49%), Gaps = 53/478 (11%)

Query: 18  CFTP--DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           C  P  +AV++T+LI GLC   ++ EA   + ++R  GC P V TYT LV  LC +   +
Sbjct: 248 CVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGREL 307

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            AL+LF EM     E G  CEPN  TYT +ID LCKEG +D+A ++L +M +K + P+VV
Sbjct: 308 EALSLFGEMR----ERG--CEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVV 361

Query: 136 -----------------------------------TYTSVIRGFCYAKDWNEAKRLFIEM 160
                                              TY  +I GFC  K  + A  L  +M
Sbjct: 362 PFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKM 421

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           ++  + P+VVT+N ++  LC+ G +D ASRL  LMI+ G  PD +T+N  +   C  GRV
Sbjct: 422 VESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRV 481

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A ++  S++    K    +Y+ LI+GYCK  +IE A SL+  ML++   P+ +  N +
Sbjct: 482 GEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVM 541

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +  +V+ A  L ++M +  V     TY   ++ + K      A E+ + L     
Sbjct: 542 IDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGY 601

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           + ++  Y + I   C  GRLE A E+   +   GVL+ + + Y+++I      G +D A 
Sbjct: 602 QPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFI-YNLLINAYGCMGLLDSAF 660

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +   M      P+ +T+ +L++          VIE   K     V  D S+ +I VD
Sbjct: 661 GVLRRMFGTGCEPSYLTYSILMKHL--------VIEKHKKEGSNPVGLDVSLTNISVD 710



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 224/457 (49%), Gaps = 10/457 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G ++   +   RIL+    PD  T+TSL+ G C    +  A  +F  +       +  +
Sbjct: 202 LGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMP----RRNAVS 257

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++GLC       AL  +  M          C P   TYT ++  LC+ G   +A  
Sbjct: 258 YTNLIHGLCEAGKLHEALEFWARMREDG------CFPTVRTYTVLVCALCESGRELEALS 311

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M+++  +PNV TYT +I   C     +EA ++  EM+++GV P+VV FN ++   C
Sbjct: 312 LFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYC 371

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G M++A  +L LM    V P+  TYN L+ GFC    ++ A  L   M        V 
Sbjct: 372 KRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVV 431

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G C+   ++ A  L+  M+  G  PD    N   V L  + +V  A ++ + +
Sbjct: 432 TYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +   V A+   Y   IDG CK G I  A  LF  +   +C  +   +N +IDGL K G++
Sbjct: 492 KEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKV 551

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A+ L   +    + P + TY+I++  +  +   D+A ++   +  +   PNV+T+   
Sbjct: 552 QDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAF 611

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           I+ +       +  E++ K+K   V+ D+ I +++++
Sbjct: 612 IKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLIN 648



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 216/455 (47%), Gaps = 18/455 (3%)

Query: 10  VLGRILKSCFTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           V   ++KSC +P DA    +L++      R+  AAA          +  + +Y  L+  L
Sbjct: 108 VRNSMIKSCTSPHDATFLLNLLR------RMNTAAAAADHQHQLAFKLSLTSYNRLLMCL 161

Query: 69  CRTSHTIVALNLFEEMA--NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            R S     ++L++EM   NGN  F     PN +T  T+++  CK G +  A+   +++ 
Sbjct: 162 SRFSMVDEMISLYKEMLTDNGNSVF-----PNLITLNTMLNSYCKLGNMAVARLFFVRIL 216

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
                P++ TYTS++ G+C   D   A  +F  M  +    N V++  ++  LC+ GK+ 
Sbjct: 217 RCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLH 272

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA      M + G  P   TY  L+   C +GR   A  LF  M   GC+  V++Y++LI
Sbjct: 273 EALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLI 332

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +  CK   ++ AL + +EM+ KG+ P VV  N L     +   +E A  +   M+   V 
Sbjct: 333 DYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVC 392

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY   I G C+   +  A+ L + +   K   D+  YN+LI GLC+ G ++ A  L
Sbjct: 393 PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRL 452

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           FR +      P+  T++  +  LC  G++ +A  +   ++E  V  N   +  LI G+ +
Sbjct: 453 FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCK 512

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +      L  +M     +P++   ++++D L K
Sbjct: 513 AGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRK 547



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 216/496 (43%), Gaps = 49/496 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     VLG +      P+  T+  LI G C    +  A AL  K+      PDV TY
Sbjct: 374 GMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTY 433

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++GLC       A  LF  M            P+  T+   +  LC+ G V +A ++
Sbjct: 434 NTLIHGLCEVGVVDSASRLFRLMIRDGFS------PDQWTFNAFMVCLCRMGRVGEAHQI 487

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  +K+K++K N   YT++I G+C A     A  LF  M+ +   PN +TFNV++D L K
Sbjct: 488 LESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRK 547

Query: 182 NGKM-----------------------------------DEASRLLDLMIQHGVRPDAFT 206
            GK+                                   D A+ +L+ +I  G +P+  T
Sbjct: 548 EGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVT 607

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y   +  +C  GR+  A+E+ + +++ G     F Y++LIN Y     ++ A  +   M 
Sbjct: 608 YTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMF 667

Query: 267 SKGIKPDVVIHNTLFVGL-FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             G +P  + ++ L   L  E H+ E +  +  ++    ++ D     + ID      + 
Sbjct: 668 GTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKID------FG 721

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
           +  V LF  +    C  ++  Y+ LI+GLCK GRL +A  L+  +  G + P+ + ++ +
Sbjct: 722 ITTV-LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSL 780

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           +   C  G   +A  L   M E + + ++ ++ +LI G        K   +   +     
Sbjct: 781 LSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGY 840

Query: 446 MPDASIVSIVVDLLAK 461
             D     +++D LAK
Sbjct: 841 NYDEVAWKVLIDGLAK 856



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 179/399 (44%), Gaps = 41/399 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGRV     +L  + +     +   +T+LI G C   +I  AA+LF ++    C P+  T
Sbjct: 478 MGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSIT 537

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  +++GL +      A+ L E+MA    +F V  +P   TY  +++ + KE   D+A E
Sbjct: 538 FNVMIDGLRKEGKVQDAMLLVEDMA----KFDV--KPTLHTYNILVEEVLKEYDFDRANE 591

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L ++     +PNVVTYT+ I+ +C      EA+ + I++ ++GV  +   +N++++   
Sbjct: 592 ILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYG 651

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE--------------- 225
             G +D A  +L  M   G  P   TY+ L+    +     H KE               
Sbjct: 652 CMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIE---KHKKEGSNPVGLDVSLTNIS 708

Query: 226 -----------------LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
                            LF  M   GC   + +YS LING CK   +  A SLY  M   
Sbjct: 709 VDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREG 768

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           GI P  +IHN+L     ++     A  L D M      A   +Y+  I GL +     +A
Sbjct: 769 GISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKA 828

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
             +F +L      +D  A+  LIDGL K+G ++   EL 
Sbjct: 829 EAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELL 867



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 70/302 (23%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-------------------- 49
           +L R++ S + P+ VT+T+ IK  C++ R+ EA  +  K+                    
Sbjct: 592 ILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYG 651

Query: 50  -------------RVFG--CEPDVFTYTTLVNGLCRTSHTIVALN--------------- 79
                        R+FG  CEP   TY+ L+  L    H     N               
Sbjct: 652 CMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDN 711

Query: 80  --------------LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
                         LFE+MA    E G  C PN  TY+ +I+GLCK G ++ A  L   M
Sbjct: 712 TDIWSKIDFGITTVLFEKMA----ECG--CVPNLNTYSKLINGLCKVGRLNVAFSLYHHM 765

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           ++  I P+ + + S++   C    + EA  L   MM+     ++ ++ +++  L +    
Sbjct: 766 REGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNK 825

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           ++A  +   +++ G   D   +  L+DG   TG V+   EL   ME  GC+    +YS+L
Sbjct: 826 EKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSML 885

Query: 246 IN 247
           + 
Sbjct: 886 MQ 887


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 248/462 (53%), Gaps = 7/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +   ++     PD +++ +L+ G      I     LF  +   G  PD   +
Sbjct: 272 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 331

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+N   R      +L +FE+M       GV   P+ +T++T+I   C+ G +D A E 
Sbjct: 332 NTLINAYARLGMMDKSLLMFEDMTKQ----GV--NPDIITFSTVISAFCRLGRLDDAMEK 385

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF-NVIMDELC 180
              M D  + P+   Y+ +I+G C  +D  +AK L  +M+ +G+ P  + F   I++ LC
Sbjct: 386 FNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 445

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ E   ++DL+I  G RP+  T+N+L+DG+CL G +  A  L  SMES+G +  ++
Sbjct: 446 KEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIY 505

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L++GYCK+  I+ AL+L+ +ML K +    V +N +  GLF+  +   A ++F EM
Sbjct: 506 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 565

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G+A    TY T + GLC+N    EA  L   L  +  +FDI  +N +I  + K GR 
Sbjct: 566 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRR 625

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ELF ++    LVP ++TY +MI  L  +   + A +LF  ME+++  P+    + +
Sbjct: 626 QEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEI 685

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           IR  +   E +K    L K+ +  ++P+A+  S+++ L + N
Sbjct: 686 IRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVN 727



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 239/495 (48%), Gaps = 42/495 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G  V GR+L++   PD  ++ +LI G   E  + +A  LF K+   G  P+V TY+
Sbjct: 133 RPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYS 192

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG-------------- 108
           +L+NGLC+T     A  +  +M       G    PN +TY  +I G              
Sbjct: 193 SLINGLCKTKEMDKAERVLRQMV------GAGVRPNNMTYNCLIHGYSTSGMWKESVRVF 246

Query: 109 ---------------------LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                                LCK G + +A+++   M  K  KP+V++Y +++ G+  A
Sbjct: 247 KEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATA 306

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                   LF  M+ +GV P+   FN +++   + G MD++  + + M + GV PD  T+
Sbjct: 307 GCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITF 366

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           +T++  FC  GR++ A E F  M   G       YS LI G C  +++  A  L S+MLS
Sbjct: 367 STVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLS 426

Query: 268 KGIKPDVV-IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           KGI P  +    ++   L +  +V     + D +   G   +  T+ + +DG C  G + 
Sbjct: 427 KGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMK 486

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EAV L  ++  +  E DI  YN+L+DG CK GR++ AL LFR +    +    V+Y+I++
Sbjct: 487 EAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIIL 546

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GL    +   A+++F +M E+ +  ++ T+  ++ G  R N   +   LL K+  +NV 
Sbjct: 547 HGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVK 606

Query: 447 PDASIVSIVVDLLAK 461
            D    +IV+  + K
Sbjct: 607 FDILTFNIVIRAMFK 621



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 218/426 (51%), Gaps = 12/426 (2%)

Query: 42  AAALFTKLRVFGCE---PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEP 97
           A  LF ++    C    P ++TY  L+N   R     + L +F  +   G G       P
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLG-------P 151

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           +  +Y  +IDG  KEG VDKA +L  +M+++ I PNVVTY+S+I G C  K+ ++A+R+ 
Sbjct: 152 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 211

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M+  GV+PN +T+N ++     +G   E+ R+   M    + PD    N+ +   C  
Sbjct: 212 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 271

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           GR+  A+++F SM   G K  V SY  L++GY     I G  +L++ M+ +G+ PD  + 
Sbjct: 272 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 331

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           NTL      +  ++++  +F++M + GV  D  T+ T I   C+ G + +A+E F+ +  
Sbjct: 332 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 391

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                D   Y+ LI G C    L  A EL    L  G+  P +  ++ +I  LC +G++ 
Sbjct: 392 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 451

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           + +D+   +      PN+ITF+ L+ G+  +    + + LL  M+ + V PD    + +V
Sbjct: 452 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 511

Query: 457 DLLAKN 462
           D   K+
Sbjct: 512 DGYCKH 517



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 196/419 (46%), Gaps = 9/419 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +    ++   + K    PD +TF+++I   C   R+ +A   F  +   G  PD   
Sbjct: 341 LGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAV 400

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+ G C     + A  L  +M +       +  P    +T+II+ LCKEG V + K+
Sbjct: 401 YSCLIQGQCNRRDLVKAKELISDMLSKG-----IPPPCIKFFTSIINNLCKEGRVAEGKD 455

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++  +     +PN++T+ S++ G+C   +  EA  L   M   GV+P++ T+N ++D  C
Sbjct: 456 VVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYC 515

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G++D+A  L   M+   V   + +YN +L G     R   AKE+F  M   G   ++ 
Sbjct: 516 KHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIH 575

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++ G C+N   + A  L  ++ S  +K D++  N +   +F++ + + A +LF  +
Sbjct: 576 TYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAI 635

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     TYR  I  L K     +A  LF ++    C  D R  N +I  L   G +
Sbjct: 636 STYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEV 695

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD----MEENAVVPNVI 415
             A      +    ++P   T S++I     +G+  +   L  +    + E A V N I
Sbjct: 696 AKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLREQAAVDNCI 754


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 150/460 (32%), Positives = 242/460 (52%), Gaps = 6/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V  R++     P   T+++L+  L           L  ++   G  P+++TY
Sbjct: 206 GFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTY 265

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T  +  L R      A  + + M +        C P+ VTYT +ID LC  G +DKAKEL
Sbjct: 266 TICIRVLGRAGRIDDAYGILKTMEDEG------CGPDVVTYTVLIDALCAAGKLDKAKEL 319

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+  + KP++VTY +++  F    D    KR + EM   G  P+VVT+ ++++ LCK
Sbjct: 320 YTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCK 379

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +GK+D+A  +LD+M   G+ P+  TYNTL+ G     R++ A ELF +MES+G   T +S
Sbjct: 380 SGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYS 439

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y + I+ Y K  + E AL  + +M  +GI P +   N     L E+ ++  A  +F+++ 
Sbjct: 440 YVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIH 499

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G++ D+ TY   +    K G I +A +L   +    CE DI   NSLID L K+GR++
Sbjct: 500 NCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVD 559

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++F  L    L P VVTY+I+I GL  +G++ KA DLF  M+E+   PN +TF+ L+
Sbjct: 560 EAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               + +     +++  +M  +N  PD    + ++  L K
Sbjct: 620 DCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIK 659



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 237/443 (53%), Gaps = 13/443 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+   + +L  +      PD VT+T LI  LCA  ++ +A  L+TK+R    +PD+ TY
Sbjct: 276 GRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTY 335

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            TL++              + EM A+G         P+ VTYT +++ LCK G VD+A +
Sbjct: 336 ITLMSKFGNYGDLETVKRFWSEMEADGYA-------PDVVTYTILVEALCKSGKVDQAFD 388

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  M+ + I PN+ TY ++I G    +  +EA  LF  M   GV P   ++ + +D   
Sbjct: 389 MLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYG 448

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G  ++A    + M + G+ P     N  L      GR+  AK++F  + + G      
Sbjct: 449 KLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSV 508

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++++  Y K  +I+ A  L +EMLS+G +PD+++ N+L   L++  +V+ A+++F  +
Sbjct: 509 TYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL 568

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +   +A    TY   I GL K G +++A++LF +++   C  +   +N+L+D LCK+  +
Sbjct: 569 KDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAV 628

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           ++AL++F  +      P+V+TY+ +I GL  +G+   A   +  M++  + P+ +T   L
Sbjct: 629 DLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKK-FLSPDHVTLYTL 687

Query: 421 IRGFI---RINEPSKVI-ELLHK 439
           + G +   R+ +  K++ E +H+
Sbjct: 688 LPGVVKDGRVEDAIKIVMEFVHQ 710



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 227/471 (48%), Gaps = 6/471 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     V   + K     +  T+ ++ K L  +  I +A     K+R  G   + ++Y
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+  L +      AL +++ M +         +P+  TY+ ++  L +        +L
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRMISEG------LKPSMKTYSALMVALGRRRDTGTIMDL 249

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   ++PN+ TYT  IR    A   ++A  +   M D+G  P+VVT+ V++D LC 
Sbjct: 250 LEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCA 309

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+D+A  L   M     +PD  TY TL+  F   G +   K  +  ME+ G    V +
Sbjct: 310 AGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVT 369

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+IL+   CK+ +++ A  +   M  +GI P++  +NTL  GL  + +++ A +LF+ M+
Sbjct: 370 YTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GVA   ++Y  FID   K G   +A++ F  ++       I A N+ +  L + GR+ 
Sbjct: 430 SLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIR 489

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++F  +    L P+ VTY++M+      GQ+DKA  L  +M      P++I  + LI
Sbjct: 490 EAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLI 549

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
               +     +  ++  ++K++ + P     +I++  L K    L +L  F
Sbjct: 550 DTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLF 600



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 207/428 (48%), Gaps = 7/428 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+T  I+ L    RI +A  +   +   GC PDV TYT L++ LC       A  L
Sbjct: 260 PNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKEL 319

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + +M   + +      P+ VTY T++      G ++  K    +M+     P+VVTYT +
Sbjct: 320 YTKMRASSHK------PDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTIL 373

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C +   ++A  +   M  +G+ PN+ T+N ++  L    ++DEA  L + M   GV
Sbjct: 374 VEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGV 433

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P A++Y   +D +   G    A + F  M+  G   ++ + +  +    +   I  A  
Sbjct: 434 APTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKD 493

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +++++ + G+ PD V +N +     +  Q+++A KL  EM   G   D     + ID L 
Sbjct: 494 IFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLY 553

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + EA ++F  L+ LK    +  YN LI GL K G+L  AL+LF S+      PN V
Sbjct: 554 KAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTV 613

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++ ++  LC +  +D A  +F  M      P+V+T++ +I G I+           H+M
Sbjct: 614 TFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM 673

Query: 441 KEINVMPD 448
           K+  + PD
Sbjct: 674 KKF-LSPD 680



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 216/463 (46%), Gaps = 15/463 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  +L     PD +   SLI  L    R+ EA  +F +L+     P V TY
Sbjct: 521 GQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTY 580

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GL +    + AL+LF  M          C PNTVT+  ++D LCK   VD A ++
Sbjct: 581 NILITGLGKEGKLLKALDLFGSMKESG------CPPNTVTFNALLDCLCKNDAVDLALKM 634

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M   N  P+V+TY ++I G         A   F   M + + P+ VT   ++  + K
Sbjct: 635 FCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYA-FWFYHQMKKFLSPDHVTLYTLLPGVVK 693

Query: 182 NGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +G++++A ++ ++ + Q G++     +  L++   +   +  A       E + C     
Sbjct: 694 DGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISF---AEGLVCNSICQ 750

Query: 241 SYSI---LINGYCKNKEIEGALSLYSEML-SKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             ++   LI   CK K+   A  L+ +   S G  P    +N L  GL   +  E A KL
Sbjct: 751 DDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKL 810

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F EM+  G   + +TY   +D   K+  I E  EL++ +    C+ +I  +N +I  L K
Sbjct: 811 FVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVK 870

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           S  +  AL+L+  +  G   P   TY  +IGGL   G+ ++A  +F +M +    PN   
Sbjct: 871 SNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAI 930

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +++LI GF +    +   +L  +M +  + PD    +I+V+ L
Sbjct: 931 YNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECL 973



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 230/476 (48%), Gaps = 13/476 (2%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV   + + GR+      P  VT+  LI GL  E ++++A  LF  ++  GC P+  T+
Sbjct: 556  GRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTF 615

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              L++ LC+     +AL +F  M   N      C P+ +TY TII GL KEG    A   
Sbjct: 616  NALLDCLCKNDAVDLALKMFCRMTIMN------CSPDVLTYNTIIYGLIKEGRAGYAFWF 669

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELC 180
              QMK K + P+ VT  +++ G        +A ++ +E + Q G+Q +   +  +M+ + 
Sbjct: 670  YHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECIL 728

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTV 239
               +++EA    + ++ + +  D      L+   C   +   AK+LF    +S+G   T 
Sbjct: 729  IEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTP 788

Query: 240  FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             SY+ L++G       E AL L+ EM + G  P++  +N L     +  +++  F+L++E
Sbjct: 789  ESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNE 848

Query: 300  MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR--AYNSLIDGLCKS 357
            M   G   +  T+   I  L K+  I +A++L++   I+  +F      Y  LI GL K+
Sbjct: 849  MLCRGCKPNIITHNIIISALVKSNSINKALDLYY--EIISGDFSPTPCTYGPLIGGLLKA 906

Query: 358  GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
            GR E A+++F  +P     PN   Y+I+I G    G ++ A DLF  M +  + P++ ++
Sbjct: 907  GRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSY 966

Query: 418  DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
             +L+            +    ++K   + PD    +++++ L K+     +L  F+
Sbjct: 967  TILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFS 1022



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 207/456 (45%), Gaps = 44/456 (9%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEA----------AALFTKLRV 51
            GR  + F    + +K   +PD VT  +L+ G+  + R+ +A          + L T  +V
Sbjct: 661  GRAGYAFWFYHQ-MKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQV 719

Query: 52   FG---------------------------CEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
            +G                           C+ D      L+  LC+    + A  LF++ 
Sbjct: 720  WGELMECILIEAEIEEAISFAEGLVCNSICQDDNLI-LPLIRVLCKQKKALDAKKLFDKF 778

Query: 85   ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                G       P   +Y  ++DGL      + A +L ++MK+    PN+ TY  ++   
Sbjct: 779  TKSLGT-----HPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAH 833

Query: 145  CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
              +K  +E   L+ EM+ +G +PN++T N+I+  L K+  +++A  L   +I     P  
Sbjct: 834  GKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTP 893

Query: 205  FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             TY  L+ G    GR   A ++F  M    CK     Y+ILING+ K   +  A  L+  
Sbjct: 894  CTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKR 953

Query: 265  MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
            M+ +GI+PD+  +  L   LF   +V+ A   F+E++  G+  DT +Y   I+GL K+  
Sbjct: 954  MIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRR 1013

Query: 325  IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
            + EA+ LF  ++      ++  YN+LI     +G ++ A ++F  L    L PNV TY+ 
Sbjct: 1014 LEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNA 1073

Query: 385  MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            +I G    G  D+A  +F  M      PN  TF  L
Sbjct: 1074 LIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 210/462 (45%), Gaps = 32/462 (6%)

Query: 20   TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            +PD +T+ ++I GL  E R   A   + +++ F   PD  T  TL+ G+ +      A+ 
Sbjct: 644  SPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIK 702

Query: 80   LFEEMANGNG---------------------------EFGVVCEP---NTVTYTTIIDGL 109
            +  E  + +G                             G+VC     +      +I  L
Sbjct: 703  IVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVL 762

Query: 110  CKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            CK+     AK+L  +  K     P   +Y  ++ G         A +LF+EM + G  PN
Sbjct: 763  CKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPN 822

Query: 169  VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
            + T+N+++D   K+ ++DE   L + M+  G +P+  T+N ++     +  +N A +L+ 
Sbjct: 823  IFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYY 882

Query: 229  SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
             + S     T  +Y  LI G  K    E A+ ++ EM     KP+  I+N L  G  +  
Sbjct: 883  EIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAG 942

Query: 289  QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
             V  A  LF  M + G+  D  +Y   ++ L   G + +AV  F  L++   + D  +YN
Sbjct: 943  NVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYN 1002

Query: 349  SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
             +I+GL KS RLE AL LF  +    + P + TY+ +I    N G +D+A  +F +++  
Sbjct: 1003 LMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFM 1062

Query: 409  AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             + PNV T++ LIRG  +     +   +  KM  +   P+A 
Sbjct: 1063 GLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAG 1104



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 210/486 (43%), Gaps = 44/486 (9%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++ K    P      + +  L    RI EA  +F  +   G  PD  TY  ++    +  
Sbjct: 462 KMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAG 521

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A  L  EM +        CEP+ +   ++ID L K G VD+A ++  ++KD  + P
Sbjct: 522 QIDKATKLLTEMLSEG------CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAP 575

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            VVTY  +I G        +A  LF  M + G  PN VTFN ++D LCKN  +D A ++ 
Sbjct: 576 TVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMF 635

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M      PD  TYNT++ G    GR  +A   +  M+       V  Y++L  G  K+
Sbjct: 636 CRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLL-PGVVKD 694

Query: 253 KEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAF----------------- 294
             +E A+ +  E + + G++    +   L   +    ++E A                  
Sbjct: 695 GRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNL 754

Query: 295 ------------------KLFDEMQRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
                             KLFD+  ++ G      +Y   +DGL        A++LF  +
Sbjct: 755 ILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEM 814

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +   C  +I  YN L+D   KS R++   EL+  + C    PN++T++I+I  L     +
Sbjct: 815 KNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSI 874

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           +KA DL+ ++      P   T+  LI G ++     + +++  +M +    P+ +I +I+
Sbjct: 875 NKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNIL 934

Query: 456 VDLLAK 461
           ++   K
Sbjct: 935 INGFGK 940



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 116/234 (49%), Gaps = 6/234 (2%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            I+   F+P   T+  LI GL    R  EA  +F ++  + C+P+   Y  L+NG  +  +
Sbjct: 884  IISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGN 943

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              +A +LF+ M            P+  +YT +++ L   G VD A     ++K   + P+
Sbjct: 944  VNIACDLFKRMIKEG------IRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPD 997

Query: 134  VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             V+Y  +I G   ++   EA  LF EM ++G+ P + T+N ++      G +D+A ++ +
Sbjct: 998  TVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFE 1057

Query: 194  LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
             +   G+ P+ FTYN L+ G   +G  + A  +F  M  +GC     +++ L N
Sbjct: 1058 ELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 141/323 (43%), Gaps = 52/323 (16%)

Query: 149 DWNEAKRLFIEMMDQGVQPNVV----TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           D N A   F +M+ Q   PN+V    T N +++ L  +G++++ + + DLM +  +  + 
Sbjct: 101 DPNSALSYF-KMVSQ--LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNP 157

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI-----NGYCKNKEIEGAL 259
            TY T+     + G +  A      M   G     +SY+ LI      G+CK      AL
Sbjct: 158 NTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKE-----AL 212

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +Y  M+S+G+KP +  ++ L V L           L +EM+  G+  + +TY   I  L
Sbjct: 213 KVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVL 272

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G I +A  +  T+    C                                    P+V
Sbjct: 273 GRAGRIDDAYGILKTMEDEGCG-----------------------------------PDV 297

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTY+++I  LC  G++DKA++L+  M  ++  P+++T+  L+  F    +   V     +
Sbjct: 298 VTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSE 357

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M+     PD    +I+V+ L K+
Sbjct: 358 MEADGYAPDVVTYTILVEALCKS 380


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 152/481 (31%), Positives = 253/481 (52%), Gaps = 30/481 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFT 60
           G +     +LG++ +S    + +T++ +I G C  SR+ +A  +F  +   G C PDV T
Sbjct: 87  GELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVT 146

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +L+ GLC       A  LFE MA         CEPN ++Y+T++DGLCK G +D+A  
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAG------CEPNVISYSTLLDGLCKAGRLDEACR 200

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF-------- 172
           L  +M +K+  P++V YTS + G C A    EA     +M+ +G + + V F        
Sbjct: 201 LWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILC 260

Query: 173 ---------NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
                    N +++ LC++G +DEA +  + MI     P A  +NTL+   C + R+   
Sbjct: 261 KKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDG 320

Query: 224 KELFVSMESMG---CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             LF  M+SM    C   + +Y+I+++  CK K+++ A  L +EM + G+ PDVV ++ L
Sbjct: 321 VLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSAL 380

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL ++ +++RA  L +EM + GV  D++T  + ++ L K G +  A+    T++    
Sbjct: 381 VDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGS 440

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  YN+L+DGLCK+GR++ A+     +      P+V +Y+I+I  LC  GQ   A  
Sbjct: 441 TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHA 500

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           +F +M +  V+P+ + +  L+ G  R       +ELL   K     PD  +  +VVD L 
Sbjct: 501 IFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVVDGLC 557

Query: 461 K 461
           K
Sbjct: 558 K 558



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 223/455 (49%), Gaps = 52/455 (11%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S  FV+   + K+   P+ +++++L+ GLC   R+ EA  L+ ++    C PD+  YT
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGE---------FGVVCEPNTV--TYTTIIDGLCK 111
           + V GLC+ +    A +   +M     +          G++C+          +I+ LC+
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCR 278

Query: 112 EGFVDKAKE----------------------------------LLLQ----MKDKNIKPN 133
            G +D+A +                                  LL Q    MK+    PN
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           + TY  ++   C AK  +EA+ L  EM + G+ P+VVT++ ++D LCK GK+D A  LL+
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M + GV PD+FT  ++L+     G+V++A     +M++ G    + +Y+ L++G CK  
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            I+ A++  ++M++    PDV  +  +   L    Q   A  +F EM + GV  DT  Y 
Sbjct: 459 RIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYH 518

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + +DGL +NG    A+EL   L+   C+ D   +  ++DGLCK+G+ E A E+   +   
Sbjct: 519 SLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADA 575

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
               +  TY  ++ GL   G++DKAR L  D  E 
Sbjct: 576 GFPADAFTYINVVRGLRKLGKVDKARQLVDDASET 610



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 221/476 (46%), Gaps = 29/476 (6%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F  LGR  +  +     T+   +  L   +    A   F +++  G  PD FTY+ ++ G
Sbjct: 25  FDWLGR--QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRG 82

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK- 126
           LC+      A  L  ++     E GV  + N +TY+ +IDG CK   VD A E+   M  
Sbjct: 83  LCKAGELDKAKELLGQLR----ESGV--KLNVITYSVVIDGCCKASRVDDALEIFKTMSA 136

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
                P+VVT+ S+++G C  +  +EA  LF  M   G +PNV++++ ++D LCK G++D
Sbjct: 137 GGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD 196

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA RL + M++    PD   Y + + G C   RV  A +    M + G K    ++S +I
Sbjct: 197 EACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256

Query: 247 NGYCK--------NKEIEG---------ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
              CK        N+ IE          A   + EM+S+   P   + NTL   + +  +
Sbjct: 257 GILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKR 316

Query: 290 VERAFKLFDEMQRNG---VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
           +     LF  M+         +  TY   +D LCK   + EA EL + +       D+  
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y++L+DGLCK G+L+ A +L   +    + P+  T + ++  L   G++D A      M+
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                P+++T++ L+ G  +     + I  L KM      PD    +I++  L ++
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 11/227 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +L  + K    PD+ T  S++  L    ++  A +    ++  G  PD+ T
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++GLC+      A+    +M          C P+  +YT II  LC+ G    A  
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAK------CTPDVFSYTIIITALCRSGQAAGAHA 500

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDEL 179
           +  +M  + + P+ V Y S++ G       N  + L +E++   + +P+ V   +++D L
Sbjct: 501 IFQEMVKRGVLPDTVLYHSLLDGLAR----NGLEDLALELLKTSLCKPDFVMHKMVVDGL 556

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           CK GK ++A  +++ M   G   DAFTY  ++ G    G+V+ A++L
Sbjct: 557 CKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQL 603


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 248/462 (53%), Gaps = 7/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +   ++     PD +++ +L+ G      I     LF  +   G  PD   +
Sbjct: 343 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 402

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+N   R      +L +FE+M       GV   P+ +T++T+I   C+ G +D A E 
Sbjct: 403 NTLINAYARLGMMDKSLLMFEDMTKQ----GV--NPDIITFSTVISAFCRLGRLDDAMEK 456

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF-NVIMDELC 180
              M D  + P+   Y+ +I+G C  +D  +AK L  +M+ +G+ P  + F   I++ LC
Sbjct: 457 FNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 516

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ E   ++DL+I  G RP+  T+N+L+DG+CL G +  A  L  SMES+G +  ++
Sbjct: 517 KEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIY 576

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L++GYCK+  I+ AL+L+ +ML K +    V +N +  GLF+  +   A ++F EM
Sbjct: 577 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 636

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             +G+A    TY T + GLC+N    EA  L   L  +  +FDI  +N +I  + K GR 
Sbjct: 637 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRR 696

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ELF ++    LVP ++TY +MI  L  +   + A +LF  ME+++  P+    + +
Sbjct: 697 QEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEI 756

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           IR  +   E +K    L K+ +  ++P+A+  S+++ L + N
Sbjct: 757 IRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVN 798



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 239/495 (48%), Gaps = 42/495 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G  V GR+L++   PD  ++ +LI G   E  + +A  LF K+   G  P+V TY+
Sbjct: 204 RPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYS 263

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG-------------- 108
           +L+NGLC+T     A  +  +M       G    PN +TY  +I G              
Sbjct: 264 SLINGLCKTKEMDKAERVLRQMV------GAGVRPNNMTYNCLIHGYSTSGMWKESVRVF 317

Query: 109 ---------------------LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                                LCK G + +A+++   M  K  KP+V++Y +++ G+  A
Sbjct: 318 KEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATA 377

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                   LF  M+ +GV P+   FN +++   + G MD++  + + M + GV PD  T+
Sbjct: 378 GCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITF 437

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           +T++  FC  GR++ A E F  M   G       YS LI G C  +++  A  L S+MLS
Sbjct: 438 STVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLS 497

Query: 268 KGIKPDVV-IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           KGI P  +    ++   L +  +V     + D +   G   +  T+ + +DG C  G + 
Sbjct: 498 KGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMK 557

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EAV L  ++  +  E DI  YN+L+DG CK GR++ AL LFR +    +    V+Y+I++
Sbjct: 558 EAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIIL 617

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GL    +   A+++F +M E+ +  ++ T+  ++ G  R N   +   LL K+  +NV 
Sbjct: 618 HGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVK 677

Query: 447 PDASIVSIVVDLLAK 461
            D    +IV+  + K
Sbjct: 678 FDILTFNIVIRAMFK 692



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 218/426 (51%), Gaps = 12/426 (2%)

Query: 42  AAALFTKLRVFGCE---PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEP 97
           A  LF ++    C    P ++TY  L+N   R     + L +F  +   G G       P
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLG-------P 222

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           +  +Y  +IDG  KEG VDKA +L  +M+++ I PNVVTY+S+I G C  K+ ++A+R+ 
Sbjct: 223 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 282

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M+  GV+PN +T+N ++     +G   E+ R+   M    + PD    N+ +   C  
Sbjct: 283 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 342

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           GR+  A+++F SM   G K  V SY  L++GY     I G  +L++ M+ +G+ PD  + 
Sbjct: 343 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 402

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           NTL      +  ++++  +F++M + GV  D  T+ T I   C+ G + +A+E F+ +  
Sbjct: 403 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 462

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                D   Y+ LI G C    L  A EL    L  G+  P +  ++ +I  LC +G++ 
Sbjct: 463 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 522

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           + +D+   +      PN+ITF+ L+ G+  +    + + LL  M+ + V PD    + +V
Sbjct: 523 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 582

Query: 457 DLLAKN 462
           D   K+
Sbjct: 583 DGYCKH 588



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 196/419 (46%), Gaps = 9/419 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +    ++   + K    PD +TF+++I   C   R+ +A   F  +   G  PD   
Sbjct: 412 LGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAV 471

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+ G C     + A  L  +M +       +  P    +T+II+ LCKEG V + K+
Sbjct: 472 YSCLIQGQCNRRDLVKAKELISDMLSKG-----IPPPCIKFFTSIINNLCKEGRVAEGKD 526

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++  +     +PN++T+ S++ G+C   +  EA  L   M   GV+P++ T+N ++D  C
Sbjct: 527 VVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYC 586

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G++D+A  L   M+   V   + +YN +L G     R   AKE+F  M   G   ++ 
Sbjct: 587 KHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIH 646

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++ G C+N   + A  L  ++ S  +K D++  N +   +F++ + + A +LF  +
Sbjct: 647 TYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAI 706

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     TYR  I  L K     +A  LF ++    C  D R  N +I  L   G +
Sbjct: 707 STYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEV 766

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD----MEENAVVPNVI 415
             A      +    ++P   T S++I     +G+  +   L  +    + E A V N I
Sbjct: 767 AKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLREQAAVDNCI 825


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/455 (33%), Positives = 230/455 (50%), Gaps = 15/455 (3%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L   F P+A T+  LI+G C   ++ +A ++F+ ++  G  P+  T  TL+ GLC    
Sbjct: 23  VLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQ 82

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL LF EM  G   F     P + ++  ++ G    G V  A   L  M+  +    
Sbjct: 83  MSSALKLFREMQAG--PF----LPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVA 136

Query: 134 VVTYTSVIRGFCY----AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             TY  V++G C+    A    +A   F EM   GV+P++ ++++++  L  +G+M EA 
Sbjct: 137 TGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAH 196

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L   M      PD  TYN L+DG+C  G+   A+ L   +   G +  VF+YSI+IN Y
Sbjct: 197 ALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCY 253

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK  ++E A  ++ +M+     P+ V  NTL  G  +   +E A KLF EM++ G  A  
Sbjct: 254 CKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATI 313

Query: 310 WTYRTFIDGLCKN-GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            TY T ID LCK  G +  AV+LF+ L        I  YNSLI G C + RL  A++ F 
Sbjct: 314 VTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFD 373

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +  G   PNV+TYSI+I GLC   +M +A     DM+ +   P V+T+  LI GF +  
Sbjct: 374 EME-GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG 432

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           E    +    KMK     P+  I + ++D L K E
Sbjct: 433 ELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAE 467



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 224/428 (52%), Gaps = 18/428 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAES----RIMEAAALFTKLRVFGCEPD 57
           GRV      L  + KS  +    T+  ++KGLC E+    R+ +A   F +++  G EPD
Sbjct: 116 GRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPD 175

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           + +Y  L++ L  +     A  LF  M          C P+ +TY  ++DG CK G   +
Sbjct: 176 LESYHILLSALSDSGRMAEAHALFSAM---------TCSPDIMTYNVLMDGYCKIGQTYE 226

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A+ L+ ++     +PNV TY+ +I  +C      EA  +F++M++    PN VTFN ++ 
Sbjct: 227 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 286

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT-GRVNHAKELFVSMESMGCK 236
             CK G +++A +L   M + G +    TYNTL+D  C   G V  A +LF  +E  G  
Sbjct: 287 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLT 346

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
            T+ +Y+ LI G+C  + +  A+  + EM  K   P+V+ ++ L  GL ++ +++ A K 
Sbjct: 347 PTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKT 405

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            ++M+ +G      TY   I+G CK G +  A+  F  +++  C  +   +N+LIDGLCK
Sbjct: 406 LEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCK 465

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           + R    L L   +      P+V+TY+ +I GLC+  +++ A+ LF  M   A  PNV T
Sbjct: 466 AERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTT 522

Query: 417 FDMLIRGF 424
           F+ LIRG 
Sbjct: 523 FNFLIRGL 530



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 206/383 (53%), Gaps = 14/383 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  ++  L+  L    R+ EA ALF+ +    C PD+ TY  L++G C+   T  A +L
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSL 230

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +E+     E      PN  TY+ II+  CK   V++A E+ ++M + N  PN VT+ ++
Sbjct: 231 MKEILKAGYE------PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 284

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN-GKMDEASRLLDLMIQHG 199
           I GFC A    +A +LF EM   G +  +VT+N ++D LCK  G +  A  L + +   G
Sbjct: 285 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 344

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P   TYN+L+ GFC   R++ A + F  ME   C   V +YSILI+G CK + ++ A 
Sbjct: 345 LTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAA 403

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
               +M + G  P VV +  L  G  +  +++ A   F++M+  G A +T  + T IDGL
Sbjct: 404 KTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGL 463

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK     + + L   +    C+ D+  YN LI GLC + R+E A  LF  + C    PNV
Sbjct: 464 CKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMAC---APNV 520

Query: 380 VTYSIMIGGLCNDGQMDKARDLF 402
            T++ +I GLC   ++++AR++ 
Sbjct: 521 TTFNFLIRGLCAQKKVEEARNIL 543



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 215/445 (48%), Gaps = 15/445 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++S    +   +    F P + +   L++G     R+ +A A    +R         T
Sbjct: 80  IGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGT 139

Query: 61  YTTLVNGLCRTSHTI----VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           Y  ++ GLC  + +      A+  F+EM       GV  EP+  +Y  ++  L   G + 
Sbjct: 140 YNLVLKGLCWENKSANRLEQAMEFFKEMKAS----GV--EPDLESYHILLSALSDSGRMA 193

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  L   M      P+++TY  ++ G+C      EA+ L  E++  G +PNV T+++I+
Sbjct: 194 EAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIII 250

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           +  CK  K++EA  +   MI+    P+A T+NTL+ GFC  G +  A +LF  ME +GCK
Sbjct: 251 NCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCK 310

Query: 237 HTVFSYSILINGYCKNK-EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
            T+ +Y+ LI+  CK +  +  A+ L++++   G+ P +V +N+L  G  +  ++  A +
Sbjct: 311 ATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQ 370

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
            FDEM+    A +  TY   IDGLCK   + EA +    ++       +  Y  LI+G C
Sbjct: 371 YFDEME-GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFC 429

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K G L+ AL  F  +      PN V ++ +I GLC   + +    L   M      P+VI
Sbjct: 430 KCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVI 489

Query: 416 TFDMLIRGFIRINEPSKVIELLHKM 440
           T++ LI G    N       L   M
Sbjct: 490 TYNCLISGLCSANRVEDAQRLFDGM 514



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 176/329 (53%), Gaps = 11/329 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      ++  ILK+ + P+  T++ +I   C   ++ EA  +F K+    C P+  T
Sbjct: 221 IGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 280

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE-GFVDKAK 119
           + TL+ G C+      A+ LF EM        + C+   VTY T+ID LCK+ G V  A 
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEK------IGCKATIVTYNTLIDSLCKKRGGVYTAV 334

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L  +++   + P +VTY S+I+GFC A+  +EA + F EM +    PNV+T+++++D L
Sbjct: 335 DLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGL 393

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK  +M EA++ L+ M  HG  P   TY  L++GFC  G +  A   F  M+  GC    
Sbjct: 394 CKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNT 453

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             ++ LI+G CK +     L L   M ++G KPDV+ +N L  GL   ++VE A +LFD 
Sbjct: 454 VIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDG 513

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           M     A +  T+   I GLC    + EA
Sbjct: 514 M---ACAPNVTTFNFLIRGLCAQKKVEEA 539



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 167/327 (51%), Gaps = 7/327 (2%)

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +++ G   A+  ++A RLF E++     PN  T+NV++   CK G+M +A  +   M   
Sbjct: 2   ALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS 61

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P+A T NTLL G C  G+++ A +LF  M++     T  S++IL+ G+     +  A
Sbjct: 62  GLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDA 121

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLF----EIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           L+   +M           +N +  GL       +++E+A + F EM+ +GV  D  +Y  
Sbjct: 122 LAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHI 181

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +  L  +G + EA  LF  +    C  DI  YN L+DG CK G+   A  L + +    
Sbjct: 182 LLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAG 238

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             PNV TYSI+I   C   ++++A ++F+ M E+  VPN +TF+ LI GF +       I
Sbjct: 239 YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAI 298

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
           +L  +M++I         + ++D L K
Sbjct: 299 KLFAEMEKIGCKATIVTYNTLIDSLCK 325



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 155/309 (50%), Gaps = 7/309 (2%)

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++  L    K D+A RL   ++     P+A TYN L+ GFC  G+++ A  +F  M+S
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G      + + L+ G C+  ++  AL L+ EM +    P    HN L  G F   +V  
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLC----KNGYIVEAVELFHTLRILKCEFDIRAYN 348
           A     +M+++  +  T TY   + GLC        + +A+E F  ++    E D+ +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            L+  L  SGR+  A  LF ++ C    P+++TY++++ G C  GQ  +A+ L  ++ + 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
              PNV T+ ++I  + ++++  +  E+  KM E N +P+A   + ++    K  +  ++
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 469 LPSFTVHEQ 477
           +  F   E+
Sbjct: 298 IKLFAEMEK 306



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 91/174 (52%), Gaps = 9/174 (5%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ +T++ LI GLC   R+ EAA     ++  G  P V TY  L+NG C+      AL 
Sbjct: 380 APNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALL 439

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            FE+M          C PNTV + T+IDGLCK    +    LL  M  +  KP+V+TY  
Sbjct: 440 FFEKMKLAG------CAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNC 493

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           +I G C A    +A+RLF  M      PNV TFN ++  LC   K++EA  +LD
Sbjct: 494 LISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/460 (32%), Positives = 240/460 (52%), Gaps = 6/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S  F +   + +    PD  T+ SLI GL    R  +A  L  ++   GC PDV TY
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L+ GL +   T+ A  LF+EM    G      +P+++T+T ++D L K G VD A EL
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKR-RGR-----KPDSITFTALMDALGKAGRVDDALEL 241

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK++ +KP VVTY ++I GF    D  EA  L  EM   G +P+VVT++ ++  L K
Sbjct: 242 LDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++DEA ++L  M + G  PD  TYNTL++G    G +N A  LF  M+S GC   V +
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT 361

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI    K   +E A  L+ EM S GI+PD+  + ++   L +  QV+ A +LF EM+
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G++ D  TY  F++ L + G   EA ++F  ++      D+  Y++L+ GL K+  ++
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVD 481

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L + L       + + +   +  L + G +D+A +L        + P   +++ LI
Sbjct: 482 DACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALI 541

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               +    S+    L  +KE    PD    S ++  L +
Sbjct: 542 DALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQ 581



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 236/460 (51%), Gaps = 6/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +L  +  +   PD  T+  LI  L    R+ EA  LF ++R  GC PD FTY
Sbjct: 93  GQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTY 152

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ GL +   +  A+ L EEM          C P+ +TY+++I GL K+G   KA +L
Sbjct: 153 NSLIYGLGKVGRSQKAMELLEEMERHG------CPPDVMTYSSLITGLGKDGETVKAFKL 206

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK +  KP+ +T+T+++     A   ++A  L  EM ++GV+P VVT+N ++    K
Sbjct: 207 FQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGK 266

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + EA  LLD M ++G +PD  TY+ L+ G     +++ A ++   ME  GC     +
Sbjct: 267 VGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTIT 326

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LING  K   +  A  L+  M SKG  PDVV ++TL   L +  +VE A  LF+EM+
Sbjct: 327 YNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEME 386

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D +TY + I  L K G + +A  LF  +R      D+  YN+ ++ L + GR +
Sbjct: 387 SVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFK 446

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++F  +    L+P+V TY  ++ GL    ++D A  L  ++ E     + + FD  +
Sbjct: 447 EARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECL 506

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                     +  ELL       + P AS  + ++D LAK
Sbjct: 507 EILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAK 546



 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 151/441 (34%), Positives = 230/441 (52%), Gaps = 6/441 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V+  +      P+  T+ +L+  L    +  EA  L  ++R  GC PDV TY
Sbjct: 58  GKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTY 117

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ L +      A  LF EM     E G  C P+T TY ++I GL K G   KA EL
Sbjct: 118 NCLISTLGKAGRLSEAFTLFAEMR----ERG--CVPDTFTYNSLIYGLGKVGRSQKAMEL 171

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+     P+V+TY+S+I G     +  +A +LF EM  +G +P+ +TF  +MD L K
Sbjct: 172 LEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGK 231

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D+A  LLD M + GV+P   TYN L+ GF   G +  A  L   M+  GCK  V +
Sbjct: 232 AGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVT 291

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI G  K  +++ A  +  +M  +G  PD + +NTL  GL +   +  A +LFD M+
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY T I  L K   +  A  LF  +  +  + D+  Y S+I  L K+G+++
Sbjct: 352 SKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVD 411

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF  +    L P+V+TY+  +  L   G+  +AR +F DM+E+ ++P+V T+D L+
Sbjct: 412 DADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALL 471

Query: 422 RGFIRINEPSKVIELLHKMKE 442
            G  +  E      LL ++ E
Sbjct: 472 LGLSKTKEVDDACGLLKELIE 492



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/445 (31%), Positives = 234/445 (52%), Gaps = 6/445 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +TPD V+++ LI  L    +   A  +  +++  GC+P+++TY TLV+ L +      AL
Sbjct: 40  WTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEAL 99

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L  EM + NG     C P+  TY  +I  L K G + +A  L  +M+++   P+  TY 
Sbjct: 100 RLLAEMRD-NG-----CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYN 153

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I G        +A  L  EM   G  P+V+T++ ++  L K+G+  +A +L   M + 
Sbjct: 154 SLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRR 213

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G +PD+ T+  L+D     GRV+ A EL   M+  G K  V +Y+ LI G+ K  ++  A
Sbjct: 214 GRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEA 273

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            +L  EM   G KPDVV ++ L  GL +  Q++ A ++  +M++ G   DT TY T I+G
Sbjct: 274 YNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLING 333

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L K G + +A  LF  ++   C  D+  Y++LI  L K+ R+E A  LF  +    + P+
Sbjct: 334 LGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPD 393

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           + TY  +I  L   GQ+D A  LF +M    + P+VIT++  +    R     +  ++  
Sbjct: 394 LFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFE 453

Query: 439 KMKEINVMPDASIVSIVVDLLAKNE 463
            MKE  ++PD +    ++  L+K +
Sbjct: 454 DMKESGLLPDVATYDALLLGLSKTK 478



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 146/435 (33%), Positives = 221/435 (50%), Gaps = 8/435 (1%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           +K   +P+ VT+ SL+  L    +  EA  LF +L+     PDV +Y+ L+N L R    
Sbjct: 1   MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW 60

Query: 75  IVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
             AL +  EM A G       C+PN  TY T++D L K G  D+A  LL +M+D    P+
Sbjct: 61  EAALEVVAEMQAKG-------CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPD 113

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V TY  +I     A   +EA  LF EM ++G  P+  T+N ++  L K G+  +A  LL+
Sbjct: 114 VRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLE 173

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M +HG  PD  TY++L+ G    G    A +LF  M+  G K    +++ L++   K  
Sbjct: 174 EMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG 233

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++ AL L  EM  +G+KP VV +N L  G  ++  +  A+ L DEM+RNG   D  TY 
Sbjct: 234 RVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I GL K   + EA ++   +    C  D   YN+LI+GL K+G L  A  LF  +   
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK 353

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P+VVTYS +I  L    +++ A  LF +ME   + P++ T+  +I    +  +    
Sbjct: 354 GCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDA 413

Query: 434 IELLHKMKEINVMPD 448
             L  +M+   + PD
Sbjct: 414 DRLFSEMRGKGLSPD 428



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 205/406 (50%), Gaps = 6/406 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V TY +L+N L +      A  LFEE+            P+ V+Y+ +I+ L + G  
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAK------WTPDVVSYSCLINSLGRAGKW 60

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           + A E++ +M+ K  KPN+ TY +++     A  ++EA RL  EM D G  P+V T+N +
Sbjct: 61  EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCL 120

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  L K G++ EA  L   M + G  PD FTYN+L+ G    GR   A EL   ME  GC
Sbjct: 121 ISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGC 180

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +YS LI G  K+ E   A  L+ EM  +G KPD +    L   L +  +V+ A +
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALE 240

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L DEM+  GV     TY   I G  K G +VEA  L   ++   C+ D+  Y+ LI GL 
Sbjct: 241 LLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLI 300

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K+ +L+ A ++ + +      P+ +TY+ +I GL   G ++ A  LF  M+     P+V+
Sbjct: 301 KASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVV 360

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           T+  LI    +         L  +M+ + + PD      ++ +L K
Sbjct: 361 TYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGK 406



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 227/442 (51%), Gaps = 6/442 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      +L  + +    PD +T++SLI GL  +   ++A  LF +++  G +PD  T
Sbjct: 162 VGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSIT 221

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T L++ L +      AL L +EM     E GV  +P  VTY  +I G  K G + +A  
Sbjct: 222 FTALMDALGKAGRVDDALELLDEMK----ERGV--KPGVVTYNALIAGFGKVGDLVEAYN 275

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +MK    KP+VVTY+ +I G   A   +EA ++  +M  +G  P+ +T+N +++ L 
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG 335

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +++A RL D M   G  PD  TY+TL+       RV  A  LF  MES+G +  +F
Sbjct: 336 KAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLF 395

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  +I    K  +++ A  L+SEM  KG+ PDV+ +N     L    + + A K+F++M
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM 455

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           + +G+  D  TY   + GL K   + +A  L   L    C FD   ++  ++ L   G +
Sbjct: 456 KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNV 515

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A EL +      L P   +Y+ +I  L   G++ +A +   D++E    P+++++  L
Sbjct: 516 DEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSL 575

Query: 421 IRGFIRINEPSKVIELLHKMKE 442
           I    +  +     ELL +M +
Sbjct: 576 ISALGQTGQIDTAFELLEEMSK 597



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 173/358 (48%), Gaps = 6/358 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   + +L  + ++   PD VT++ LI GL   S++ EA  +  K+   GC PD  T
Sbjct: 267 VGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTIT 326

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGL +      A  LF+ M +        C P+ VTY+T+I  L K   V+ A  
Sbjct: 327 YNTLINGLGKAGLLNDAGRLFDRMKSKG------CNPDVVTYSTLITALGKAARVESACV 380

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M+   I+P++ TY S+I     A   ++A RLF EM  +G+ P+V+T+N  ++ L 
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG 440

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+  EA ++ + M + G+ PD  TY+ LL G   T  V+ A  L   +   GC     
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSL 500

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +   +        ++ A  L     SKG+ P    +N L   L +  +V  AF   +++
Sbjct: 501 KFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDL 560

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +  G   D  +Y + I  L + G I  A EL   +     +   R+Y++L+  L   G
Sbjct: 561 KEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 104/201 (51%)

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P+VV +N+L   L +  Q E A  LF+E++      D  +Y   I+ L + G    A+E+
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
              ++   C+ ++  YN+L+D L K+G+ + AL L   +     VP+V TY+ +I  L  
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G++ +A  LF +M E   VP+  T++ LI G  ++    K +ELL +M+     PD   
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 452 VSIVVDLLAKNEISLNSLPSF 472
            S ++  L K+  ++ +   F
Sbjct: 187 YSSLITGLGKDGETVKAFKLF 207


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/433 (34%), Positives = 227/433 (52%), Gaps = 27/433 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+ +  F V   ILK  +  DA+TFT+LIKGLC +  I +A     K+   G + +  +
Sbjct: 60  LGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVS 119

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  AL     +       G + +P+ V Y TIIDGLCK+  V+ A  
Sbjct: 120 YGTLINGLCKVGQTRAALEFLRRID------GKLVQPDVVMYNTIIDGLCKDKLVNDAFN 173

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I P+VVTY ++I G C      +A  L  +M+ + + P V TF++++D  C
Sbjct: 174 LYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFC 233

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GKM EA  +  +M++  V+P+  TYN+L+DG  L   V  AK +F +M  M       
Sbjct: 234 KEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKM------- 286

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
                         ++ A++L+ EM  K I PD+VI+N+L  GL +  +   A K   EM
Sbjct: 287 --------------VDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEM 332

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D +TY + +D LCKN ++ +A+EL   L+    +  +  YN LI+GLCKSGRL
Sbjct: 333 HYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRL 392

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ++F  L       +V TY+ MI G C  G  D+   +   M+++   P+    +++
Sbjct: 393 KDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEII 452

Query: 421 IRGFIRINEPSKV 433
           IR      E  K 
Sbjct: 453 IRSLFDKGENDKA 465



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 225/452 (49%), Gaps = 22/452 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP    F  ++  L   +      +L  ++   G   ++ T + L+N   +     ++ +
Sbjct: 9   TPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFS 68

Query: 80  LFEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +F   +  G G        + +T+TT+I GLC +G + KA     ++  +  K N V+Y 
Sbjct: 69  VFANILKKGYGS-------DAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I G C       A      +  + VQP+VV +N I+D LCK+  +++A  L   M+  
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            + P   TYNTL+ G C+  ++  A  L   M       TV+++SILI+ +CK  +++ A
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEA 241

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVG------------LFE--IHQVERAFKLFDEMQRNG 304
            ++++ M+ + +KP++V +N+L  G            +F   I  V+ A  LF+EM    
Sbjct: 242 KNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQ 301

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D   Y + IDGLCK+G    A++    +       DI  YNSL+D LCK+  ++ A+
Sbjct: 302 IYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAI 361

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           EL   L    + P+V TY+I+I GLC  G++  A  +F D+       +V T++ +I+GF
Sbjct: 362 ELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGF 421

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +     + + ++ KMK+    PDA    I++
Sbjct: 422 CKKGLFDETLAMVSKMKDSGCSPDAKNCEIII 453



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 183/382 (47%), Gaps = 18/382 (4%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR- 155
           P+   +  I+  L K         L  QM+   +  N+VT + +I   CY++    A   
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILIN--CYSQLGQNALSF 67

Query: 156 -LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            +F  ++ +G   + +TF  ++  LC  G++ +A    D ++  G + +  +Y TL++G 
Sbjct: 68  SVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGL 127

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G+   A E    ++    +  V  Y+ +I+G CK+K +  A +LY EM++K I P V
Sbjct: 128 CKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSV 187

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +NTL  GL  + Q++ A  L  +M    +    +T+   ID  CK G + EA  +F  
Sbjct: 188 VTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAV 247

Query: 335 LRILKCEFDIRAYNSLIDG-----LCKSGR---------LEIALELFRSLPCGVLVPNVV 380
           +     + +I  YNSL+DG     + K  +         ++ A+ LF  +    + P++V
Sbjct: 248 MMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMV 307

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+ +I GLC  G+   A     +M      P++ T++ L+    +     K IELL K+
Sbjct: 308 IYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKL 367

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
           K+  + P     +I+++ L K+
Sbjct: 368 KDQGIQPSVCTYNILINGLCKS 389



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 153/298 (51%), Gaps = 21/298 (7%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+ +LI GLC  +++ +A  L  K+ +    P V+T++ L++  C+      A N+
Sbjct: 185 PSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNV 244

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDG-----LCKEG---------FVDKAKELLLQMK 126
           F  M   +       +PN VTY +++DG     + K+           VD+A  L  +M 
Sbjct: 245 FAVMMKED------VKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMH 298

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            K I P++V Y S+I G C +     A +   EM  +G  P++ T+N ++D LCKN  +D
Sbjct: 299 FKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVD 358

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A  LL  +   G++P   TYN L++G C +GR+  A+++F  +   G    V++Y+ +I
Sbjct: 359 KAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMI 418

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
            G+CK    +  L++ S+M   G  PD      +   LF+  + ++A K F EM   G
Sbjct: 419 KGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGK-FREMIVRG 475



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 167/352 (47%), Gaps = 14/352 (3%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           +  KN  P++  +  ++     A  ++    L  +M   G+  N+VT +++++   + G+
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
              +  +   +++ G   DA T+ TL+ G CL G ++ A      + + G K    SY  
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LING CK  +   AL     +  K ++PDVV++NT+  GL +   V  AF L+ EM    
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +     TY T I GLC    + +A+ L H + +      +  ++ LID  CK G+++ A 
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGG--LCNDGQ------------MDKARDLFLDMEENAV 410
            +F  +    + PN+VTY+ ++ G  L N  +            +D+A +LF +M    +
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQI 302

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            P+++ ++ LI G  +       ++ + +M      PD    + ++D L KN
Sbjct: 303 YPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKN 354



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 24/115 (20%), Positives = 56/115 (48%)

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+   + G+  ++  +F ++       + +T++ +I GLC  G++ KA      +    
Sbjct: 53  LINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQG 112

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
              N +++  LI G  ++ +    +E L ++    V PD  + + ++D L K+++
Sbjct: 113 FKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKL 167


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/436 (31%), Positives = 232/436 (53%), Gaps = 7/436 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+  ++ G C    + EA    + +   G +PD FTYT+L+ G C+      A  +
Sbjct: 216 PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+EM          C  N V YT +I GLC E  +D+A +L ++MKD +  P V TYT +
Sbjct: 276 FKEMPLKG------CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVL 329

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I+  C ++  +EA  L  EM ++G++PN+ T+ V++D LC   K+++A  LL  M++ G+
Sbjct: 330 IKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGL 389

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TYN L++G+C  G +  A ++   MES   +    +Y+ LI GYCK + +  A+ 
Sbjct: 390 MPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMG 448

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + ++ML + + PDVV +N+L  G       + A++L   M   G+  D WTY + ID LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+  + EA +LF +L       ++  Y +LIDG CK+G++  A  +   +     +PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSL 568

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++ +I GLC DG++ +A  L   M +  + P V T  +LI   ++  +         +M
Sbjct: 569 TFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628

Query: 441 KEINVMPDASIVSIVV 456
                 PDA   +  +
Sbjct: 629 LSSGTKPDAHTYTTFI 644



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/446 (31%), Positives = 231/446 (51%), Gaps = 9/446 (2%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           LK C   + V +T LI GLC E RI EA  LF K++   C P V TYT L+  LC +   
Sbjct: 281 LKGC-RRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERK 339

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             ALNL +EM     E G+  +PN  TYT +ID LC +  ++KA+ELL QM +K + PNV
Sbjct: 340 SEALNLVKEME----EKGI--KPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNV 393

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           +TY ++I G+C      +A  +   M  + ++PN  T+N ++   CK   + +A  +L+ 
Sbjct: 394 ITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNK 452

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M++  V PD  TYN+L+DG C +G  + A  L   M   G     ++Y+ +I+  CK+K 
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKR 512

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +E A  L+  +  K + P+VV++  L  G  +  +V  A  + ++M       ++ T+  
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I GLC +G + EA  L   +  +  +  +     LI  L K G  + A   F+ +    
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             P+  TY+  I   C +G++  A D+   M+EN V P++ T+  LI+G+  +   +   
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAF 692

Query: 435 ELLHKMKEINVMPDA-SIVSIVVDLL 459
            +L +M +    P   + +S++  LL
Sbjct: 693 VVLKRMHDTGCEPSQHTFLSLIKHLL 718



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 225/448 (50%), Gaps = 7/448 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V      +  I+++   PD  T+TSLI G C    +  A  +F ++ + GC  +   
Sbjct: 231 VGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVA 290

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++GLC       A++LF +M + +      C P   TYT +I  LC      +A  
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDD------CYPTVRTYTVLIKALCGSERKSEALN 344

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+ +M++K IKPN+ TYT +I   C      +A+ L  +M+++G+ PNV+T+N +++  C
Sbjct: 345 LVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYC 404

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +++A  +++LM    +RP+  TYN L+ G+C    V+ A  +   M        V 
Sbjct: 405 KRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC-KRNVHKAMGVLNKMLERKVLPDVV 463

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G C++   + A  L S M  +G+ PD   + ++   L +  +VE A  LFD +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           ++  V  +   Y   IDG CK G + EA  +   +    C  +   +N+LI GLC  G+L
Sbjct: 524 EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKL 583

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  L   +    L P V T +I+I  L  DG  D A   F  M  +   P+  T+   
Sbjct: 584 KEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTF 643

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD 448
           I+ + R        +++ KMKE  V PD
Sbjct: 644 IQTYCREGRLQDAEDMVAKMKENGVSPD 671



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/407 (32%), Positives = 210/407 (51%), Gaps = 7/407 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+++TY  +VNG C+  +   A N +  M    G      +P+  TYT++I G C+   +
Sbjct: 216 PNIYTYNKMVNGYCKVGNVEEA-NQYVSMIVEAG-----LDPDFFTYTSLIMGYCQRKDL 269

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A ++  +M  K  + N V YT +I G C  +  +EA  LF++M D    P V T+ V+
Sbjct: 270 DSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVL 329

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC + +  EA  L+  M + G++P+  TY  L+D  C   ++  A+EL   M   G 
Sbjct: 330 IKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGL 389

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +Y+ LINGYCK   IE AL +   M S+ ++P+   +N L  G  +   V +A  
Sbjct: 390 MPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMG 448

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + ++M    V  D  TY + IDG C++G    A  L   +       D   Y S+ID LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS R+E A +LF SL    ++PNVV Y+ +I G C  G++++A  +   M     +PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSL 568

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           TF+ LI G     +  +   L  KM +I++ P  S  +I++  L K+
Sbjct: 569 TFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKD 615



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 211/448 (47%), Gaps = 29/448 (6%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +LG++L+    P+ +T+ +LI G C    I +A  +   +      P+  TY  L+ G C
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC 439

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +        N+ + M   N        P+ VTY ++IDG C+ G  D A  LL  M D+ 
Sbjct: 440 KR-------NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+  TYTS+I   C +K   EA  LF  +  + V PNVV +  ++D  CK GK++EA 
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +L+ M+     P++ T+N L+ G C  G++  A  L   M  +  + TV + +ILI+  
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRL 612

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K+ + + A   + +MLS G KPD   + T         +++ A  +  +M+ NGV+ D 
Sbjct: 613 LKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDL 672

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID-------GLCKSG---- 358
           +TY + I G    G    A  +   +    CE     + SLI        G  K G    
Sbjct: 673 FTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGV 732

Query: 359 -------RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AV 410
                    +I +EL   +    + PN  +Y  ++ G+C  G +  A  +F  M++   +
Sbjct: 733 CVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGI 792

Query: 411 VPNVITFDMLIRGFIRI---NEPSKVIE 435
            P+ + F+ L+    ++   NE +KV++
Sbjct: 793 SPSELVFNALLSCCCKLEKHNEAAKVVD 820



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 188/382 (49%), Gaps = 34/382 (8%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y T+++ L + G VD+ K++ ++M +  + PN+ TY  ++ G+C   +  EA +    ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           + G+ P+  T+  ++   C+   +D A ++   M   G R +   Y  L+ G C+  R++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A +LFV M+   C  TV +Y++LI   C ++    AL+L  EM  KGIKP++  +  L 
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L    ++E+A +L  +M   G+  +  TY   I+G CK G I +A+++   +      
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 342 FDIRAYNSL----------------------------------IDGLCKSGRLEIALELF 367
            + R YN L                                  IDG C+SG  + A  L 
Sbjct: 426 PNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    LVP+  TY+ MI  LC   ++++A DLF  +E+  V+PNV+ +  LI G+ + 
Sbjct: 486 SLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545

Query: 428 NEPSKVIELLHKMKEINVMPDA 449
            + ++   +L KM   N +P++
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNS 567



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 206/442 (46%), Gaps = 31/442 (7%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V     VL ++L+    PD VT+ SLI G C       A  L + +   G  PD +TYT+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTS 502

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           +++ LC++     A +LF+ +   +    V+  PN V YT +IDG CK G V++A  +L 
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKD----VI--PNVVMYTALIDGYCKAGKVNEAHLMLE 556

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M  KN  PN +T+ ++I G C      EA  L  +M+   +QP V T  +++  L K+G
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDG 616

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
             D A R    M+  G +PDA TY T +  +C  GR+  A+++   M+  G    +F+YS
Sbjct: 617 DFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYS 676

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH--------------- 288
            LI GY        A  +   M   G +P      +L   L E+                
Sbjct: 677 SLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMS 736

Query: 289 ---QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR----ILKCE 341
              + +   +L ++M  +GV  +  +Y   + G+C+ G +  A ++F  ++    I   E
Sbjct: 737 NMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSE 796

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
                +N+L+   CK  +   A ++   + C   +P + +  I+I  L   G+ ++   +
Sbjct: 797 L---VFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSV 853

Query: 402 FLDMEENAVVPNVITFDMLIRG 423
           F ++ +     + + + ++I G
Sbjct: 854 FQNLLQCGYYDDELAWKIIIDG 875



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 204/418 (48%), Gaps = 16/418 (3%)

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCE--------PNTVTYTTIIDGLCKEGFVDKAKEL 121
           R  H++ +      +   NG  GVV +         ++V  T  +  LC++   D++ EL
Sbjct: 118 RYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFEL 177

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++        +  Y +++         +E K++++EM++  V PN+ T+N +++  CK
Sbjct: 178 KYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++EA++ + ++++ G+ PD FTY +L+ G+C    ++ A ++F  M   GC+    +
Sbjct: 231 VGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVA 290

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G C  + I+ A+ L+ +M      P V  +  L   L    +   A  L  EM+
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY   ID LC    + +A EL   +       ++  YN+LI+G CK G +E
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL++   +    L PN  TY+ +I G C    + KA  +   M E  V+P+V+T++ LI
Sbjct: 411 DALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLI 469

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
            G  R         LL  M +  ++PD    + ++D L K++    +   F   EQ++
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKD 527



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 182/371 (49%), Gaps = 25/371 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V+   ++L ++L     P+++TF +LI GLC + ++ EA  L  K+     +P V T 
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTD 605

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++ L +      A   F++M +   +      P+  TYTT I   C+EG +  A+++
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTK------PDAHTYTTFIQTYCREGRLQDAEDM 659

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC- 180
           + +MK+  + P++ TY+S+I+G+      N A  +   M D G +P+  TF  ++  L  
Sbjct: 660 VAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE 719

Query: 181 -KNGKM----------------DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
            K GK+                D    LL+ M++HGV P+A +Y  L+ G C  G +  A
Sbjct: 720 MKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVA 779

Query: 224 KELFVSMESM-GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
           +++F  M+   G   +   ++ L++  CK ++   A  +  +M+  G  P +     L  
Sbjct: 780 EKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILIC 839

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
            L++  + ER   +F  + + G   D   ++  IDG+ K G +    ELF+ +    C F
Sbjct: 840 RLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTF 899

Query: 343 DIRAYNSLIDG 353
             + Y+ LI+G
Sbjct: 900 SSQTYSLLIEG 910



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 58/266 (21%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIK---------------GLCAESRIME---A 42
           +GR +  FVVL R+  +   P   TF SLIK               G+C  S +ME    
Sbjct: 685 LGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIV 744

Query: 43  AALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTY 102
             L  K+   G  P+  +Y  L+ G+C   +  VA  +F+ M                  
Sbjct: 745 VELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQ---------------- 788

Query: 103 TTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD 162
                   KEG                I P+ + + +++   C  +  NEA ++  +M+ 
Sbjct: 789 --------KEG----------------ISPSELVFNALLSCCCKLEKHNEAAKVVDDMIC 824

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
            G  P + +  +++  L K G+ +  + +   ++Q G   D   +  ++DG    G V  
Sbjct: 825 VGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEA 884

Query: 223 AKELFVSMESMGCKHTVFSYSILING 248
             ELF  ME  GC  +  +YS+LI G
Sbjct: 885 FYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 233/436 (53%), Gaps = 7/436 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ +T++ LI   C   R+  A + F ++   G    V+ Y +L+NG C+      A +L
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESL 457

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM N     GV  EP   T+T++I G CK+  V KA +L  +M D  I PNV T+T++
Sbjct: 458 FIEMTNK----GV--EPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTAL 511

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C      EA  LF E++++ ++P  VT+NV+++  C++GK+D+A  LL+ M Q G+
Sbjct: 512 ISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGL 571

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD +TY  L+ G C TGRV+ AK+    +     K     YS L++GYC+   +  ALS
Sbjct: 572 VPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALS 631

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
              EM+ +GI  D+V H  L  G  +    +  F L  +M   G+  D   Y + ID   
Sbjct: 632 ASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYS 691

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G   +A E +  +   +C  ++  Y +L++GLCK+G ++ A  LF+ +    + PN +
Sbjct: 692 KEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSI 751

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY   +  L  +G M +A  L   M +  ++ N +T +++IRGF ++    +  ++L +M
Sbjct: 752 TYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEM 810

Query: 441 KEINVMPDASIVSIVV 456
            E  + PD    S ++
Sbjct: 811 TENGIFPDCVTYSTLI 826



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 229/443 (51%), Gaps = 6/443 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F    VT+  LI GLC   R+ EA  +   L   G   DV TY TLV G CR       +
Sbjct: 256 FDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGI 315

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L +EM     E G    P     + ++DGL K+G +D A EL++++      PN+  Y 
Sbjct: 316 QLMDEMV----ELGF--SPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYN 369

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I   C   D ++A+ L+  M    ++PN +T+++++D  C++G++D A    D MIQ 
Sbjct: 370 ALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQD 429

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+    + YN+L++G C  G ++ A+ LF+ M + G + T  +++ LI+GYCK+ +++ A
Sbjct: 430 GIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKA 489

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             LY++M+  GI P+V     L  GL   +++  A +LFDE+    +     TY   I+G
Sbjct: 490 FKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEG 549

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C++G I +A EL   +       D   Y  LI GLC +GR+  A +    L    +  N
Sbjct: 550 YCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLN 609

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            + YS ++ G C +G++ +A     +M +  +  +++   +LI G ++  +     +LL 
Sbjct: 610 EMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLK 669

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
            M +  + PD  I + ++D  +K
Sbjct: 670 DMHDQGLRPDNVIYTSMIDTYSK 692



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 218/449 (48%), Gaps = 9/449 (2%)

Query: 3   RVSHGFVVLGRIL---KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           R SH   V    L   K C     + F  L++     SRI +A  +   +      P+V 
Sbjct: 132 RESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVR 191

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           T + L+NGL +    I    LF+E  N     GV   P+  T + ++  +C+     +AK
Sbjct: 192 TLSALLNGLLKVRKFITVWELFDESVNA----GV--RPDPYTCSAVVRSMCELKDFLRAK 245

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E +  M+      ++VTY  +I G C     +EA  +   +  +G+  +VVT+  ++   
Sbjct: 246 EKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGF 305

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+  + +   +L+D M++ G  P     + L+DG    G+++ A EL V +   G    +
Sbjct: 306 CRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNL 365

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           F Y+ LIN  CK  +++ A  LYS M    ++P+ + ++ L        +++ A   FD 
Sbjct: 366 FVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDR 425

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M ++G+    + Y + I+G CK G +  A  LF  +     E     + SLI G CK  +
Sbjct: 426 MIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQ 485

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A +L+  +    + PNV T++ +I GLC+  +M +A +LF ++ E  + P  +T+++
Sbjct: 486 VQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNV 545

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LI G+ R  +  K  ELL  M +  ++PD
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPD 574



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 193/399 (48%), Gaps = 42/399 (10%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V   F +  +++ +  TP+  TFT+LI GLC+ +++ EA+ LF +L     +P   TY 
Sbjct: 485 QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYN 544

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+ G CR      A  L E+M     + G+V  P+T TY  +I GLC  G V KAK+ +
Sbjct: 545 VLIEGYCRDGKIDKAFELLEDMH----QKGLV--PDTYTYRPLISGLCSTGRVSKAKDFI 598

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA----------------------------- 153
             +  +N+K N + Y++++ G+C      EA                             
Sbjct: 599 DDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQ 658

Query: 154 --KRLFIE----MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
             ++ F +    M DQG++P+ V +  ++D   K G   +A    DLM+     P+  TY
Sbjct: 659 PDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTY 718

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             L++G C  G ++ A  LF  M++        +Y   ++   K   ++ A+ L+  ML 
Sbjct: 719 TALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML- 777

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           KG+  + V HN +  G  ++ +   A K+  EM  NG+  D  TY T I   C++G +  
Sbjct: 778 KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGA 837

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           +V+L+ T+     E D+ AYN LI G C +G L+ A EL
Sbjct: 838 SVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFEL 876



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 165/358 (46%), Gaps = 37/358 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F +L  + +    PD  T+  LI GLC+  R+ +A      L     + +   Y
Sbjct: 554 GKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCY 613

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE------------------------- 96
           + L++G C+    + AL+   EM        +VC                          
Sbjct: 614 SALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHD 673

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P+ V YT++ID   KEG   KA E    M  +   PNVVTYT+++ G C A + + 
Sbjct: 674 QGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDR 733

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  LF  M    V PN +T+   +D L K G M EA  L   M++ G+  +  T+N ++ 
Sbjct: 734 AGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIR 792

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           GFC  GR + A ++   M   G      +YS LI  YC++  +  ++ L+  ML++G++P
Sbjct: 793 GFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEP 852

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           D+V +N L  G     ++++AF+L D+M R G+  D          L K G I EA  
Sbjct: 853 DLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDN-------KYLQKKGTIFEATH 903



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 144/303 (47%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M    + P V T + +++ L K  K      L D  +  GVRPD +T + ++   C    
Sbjct: 181 MFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKD 240

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
              AKE    ME+ G   ++ +Y++LI+G CK   +  A+ +   +  KG+  DVV + T
Sbjct: 241 FLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCT 300

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L +G   + Q E   +L DEM   G +         +DGL K G I +A EL   +    
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              ++  YN+LI+ LCK G L+ A  L+ ++    L PN +TYSI+I   C  G++D A 
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             F  M ++ +   V  ++ LI G  +  + S    L  +M    V P A+  + ++   
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480

Query: 460 AKN 462
            K+
Sbjct: 481 CKD 483



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 6/281 (2%)

Query: 185 MDEASRLLDLMIQHGVRPDAF-TYNTLLDGFCLTGRVNHAKELFVSM--ESMGCK-HTVF 240
           M+ ++    +M+   V    F   N+LL    L  R +H K +F         CK  +  
Sbjct: 99  MNHSTTSYAIMVHALVHSRLFWPANSLLHTLLL--RESHPKCVFSHFLDSYKRCKFSSTL 156

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +++L+  Y  +  I  A+ +   M +  + P+V   + L  GL ++ +    ++LFDE 
Sbjct: 157 GFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDES 216

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  D +T    +  +C+    + A E    +     +  I  YN LI GLCK  R+
Sbjct: 217 VNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRV 276

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A+E+ RSL    L  +VVTY  ++ G C   Q +    L  +M E    P       L
Sbjct: 277 SEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGL 336

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + G  +  +     EL+ K+     +P+  + + +++ L K
Sbjct: 337 VDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCK 377



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 38/84 (45%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      VL  + ++   PD VT+++LI   C    +  +  L+  +   G EPD+  
Sbjct: 797 LGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVA 856

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM 84
           Y  L+ G C       A  L ++M
Sbjct: 857 YNLLIYGCCVNGELDKAFELRDDM 880


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 253/481 (52%), Gaps = 30/481 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFT 60
           G +     +LG++ +S    + +T++ +I G C  SR+ +A  +F  +   G C PDV T
Sbjct: 87  GELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVT 146

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +L+ GLC       A  LFE MA         CEPN ++Y+T++DGLCK G +D+A  
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAG------CEPNVISYSTLLDGLCKAGRLDEACR 200

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF-------- 172
           L  +M +K+  P++V YTS + G C A    EA     +M+ +G + + V F        
Sbjct: 201 LWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILC 260

Query: 173 ---------NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
                    N +++ LC++G +DEA +  + MI     P A  +NTL+   C + R+   
Sbjct: 261 KKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDG 320

Query: 224 KELFVSMESMG---CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             LF  M+SM    C   + +Y+I+++  CK K+++ A  L +EM + G+ PDVV ++ L
Sbjct: 321 VLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSAL 380

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL ++ +++RA  L +EM + GV  D++T  + ++ L K G +  A+    T++    
Sbjct: 381 VDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGS 440

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  YN+L+DGLCK+GR++ A+     +      P+V +Y+I+I  LC  GQ   A  
Sbjct: 441 TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHA 500

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           +F +M +  V+P+ + +  L+ G  R       +ELL   K     PD  +  +V+D L 
Sbjct: 501 IFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVLDGLC 557

Query: 461 K 461
           K
Sbjct: 558 K 558



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 223/455 (49%), Gaps = 52/455 (11%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S  FV+   + K+   P+ +++++L+ GLC   R+ EA  L+ ++    C PD+  YT
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGE---------FGVVCEPNTV--TYTTIIDGLCK 111
           + V GLC+ +    A +   +M     +          G++C+          +I+ LC+
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCR 278

Query: 112 EGFVDKAKE----------------------------------LLLQ----MKDKNIKPN 133
            G +D+A +                                  LL Q    MK+    PN
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           + TY  ++   C AK  +EA+ L  EM + G+ P+VVT++ ++D LCK GK+D A  LL+
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M + GV PD+FT  ++L+     G+V++A     +M++ G    + +Y+ L++G CK  
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            I+ A++  ++M++    PDV  +  +   L    Q   A  +F EM + GV  DT  Y 
Sbjct: 459 RIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYH 518

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + +DGL +NG    A+EL   L+   C+ D   +  ++DGLCK+G+ E A E+   +   
Sbjct: 519 SLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADA 575

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
               +  TY  ++ GL   G++DKAR L  D  E 
Sbjct: 576 GFPADAFTYISVVSGLRKLGKVDKARQLVDDASET 610



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 221/476 (46%), Gaps = 29/476 (6%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F  LGR  +  +     T+   +  L   +    A   F +++  G  PD FTY+ ++ G
Sbjct: 25  FDWLGR--QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRG 82

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           LC+      A  L  ++     E GV  + N +TY+ +IDG CK   VD A E+   M  
Sbjct: 83  LCKAGELDKAKELLGQLR----ESGV--KLNVITYSVVIDGCCKASRVDDALEIFKTMSS 136

Query: 128 KN-IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
                P+VVT+ S+++G C  +  +EA  LF  M   G +PNV++++ ++D LCK G++D
Sbjct: 137 GGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD 196

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA RL + M++    PD   Y + + G C   RV  A +    M + G K    ++S +I
Sbjct: 197 EACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256

Query: 247 NGYCK--------NKEIEG---------ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
              CK        N+ IE          A   + EM+S+   P   + NTL   + +  +
Sbjct: 257 GILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKR 316

Query: 290 VERAFKLFDEMQRNG---VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
           +     LF  M+         +  TY   +D LCK   + EA EL + +       D+  
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y++L+DGLCK G+L+ A +L   +    + P+  T + ++  L   G++D A      M+
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                P+++T++ L+ G  +     + I  L KM      PD    +I++  L ++
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 11/227 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +L  + K    PD+ T  S++  L    ++  A +    ++  G  PD+ T
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++GLC+      A+    +M          C P+  +YT II  LC+ G    A  
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAK------CTPDVFSYTIIITALCRSGQAAGAHA 500

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDEL 179
           +  +M  + + P+ V Y S++ G       N  + L +E++   + +P+ V   +++D L
Sbjct: 501 IFQEMVKRGVLPDTVLYHSLLDGLAR----NGLEDLALELLKTSLCKPDFVMHKMVLDGL 556

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           CK GK ++A  +++ M   G   DAFTY +++ G    G+V+ A++L
Sbjct: 557 CKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQL 603


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 243/464 (52%), Gaps = 26/464 (5%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +L+    P+  T+  L++ LCA  R+ EA  +   +R  GC P+  TY TLV   CR
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR 199

Query: 71  TSHTIVA---LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
                 A   ++L  E  N         +PN VT+ ++++GLCK G ++ A+++  +M  
Sbjct: 200 AGELDGAERVVSLMREEGNA--------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + + P+VV+Y +++ G+C     +E+  +F EM  +G+ P+VVTF  ++   CK G +++
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  L+  M + G+R +  T+  L+DGFC  G ++ A      M   G + +V  Y+ LIN
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           GYCK   ++ A  L  EM +K +KPDVV ++T+  G  ++  ++ AF+L  +M + GV  
Sbjct: 372 GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D  TY + I GLC+   + +A ELF  +  L  + D   Y +LIDG CK G +E AL L 
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 491

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD--------- 418
             +    ++P+VVTYS++I GL    +  +A  L   +     VP+ I +D         
Sbjct: 492 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 551

Query: 419 ------MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
                  L++GF       +  ++   M + N   D S+ SI++
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILI 595



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 242/474 (51%), Gaps = 23/474 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFT 60
           GR+     V+G +  +   P+AVT+ +L+   C    +  A  + + +R  G  +P++ T
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT 225

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + ++VNGLC+      A  +F+EM            P+ V+Y T++ G CK G + ++  
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREG------LAPDVVSYNTLLSGYCKVGCLHESLA 279

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  + + P+VVT+TS+I   C A +  +A  L  +M ++G++ N VTF  ++D  C
Sbjct: 280 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 339

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +D+A   ++ M + G++P    YN L++G+C  GR++ A+EL   ME+   K  V 
Sbjct: 340 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS +I+GYCK   ++ A  L  +ML KG+ PD + +++L  GL E  ++  A +LF+ M
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + GV  D +TY T IDG CK G + +A+ L   +       D+  Y+ LI+GL KS R 
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519

Query: 361 EIALELFRSLPCGVLVPNVVTYS---------------IMIGGLCNDGQMDKARDLFLDM 405
           + A  L   L     VP+ + Y                 ++ G C  G M +A  ++  M
Sbjct: 520 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM 579

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDL 458
            +     +   + +LI G  R     K +    +M      P++ S +S+V  L
Sbjct: 580 LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     V   +++    PD V++ +L+ G C    + E+ A+F+++   G  PDV T+
Sbjct: 237 GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 296

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++  C+  +   A+ L  +M     E G+    N VT+T +IDG CK+GF+D A   
Sbjct: 297 TSLIHATCKAGNLEQAVALVAQMR----ERGL--RMNEVTFTALIDGFCKKGFLDDALLA 350

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+   I+P+VV Y ++I G+C     + A+ L  EM  + V+P+VVT++ I+   CK
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A +L   M++ GV PDA TY++L+ G C   R+N A ELF +M  +G +   F+
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+CK   +E ALSL+ EM+ KG+ PDVV ++ L  GL +  + + A +L  ++ 
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530

Query: 302 RNGVAADTWTYR---------------TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                 D   Y                  + G C  G + EA +++ ++     + D   
Sbjct: 531 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 590

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           Y+ LI G C+ G +  AL   + +      PN  +   ++ GL  +G + +A +   D+
Sbjct: 591 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 234/456 (51%), Gaps = 27/456 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTF S++ GLC   R+  A  +F ++   G  PDV +Y TL++G C+      +L +
Sbjct: 221 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 280

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM     + G+V  P+ VT+T++I   CK G +++A  L+ QM+++ ++ N VT+T++
Sbjct: 281 FSEMT----QRGLV--PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC     ++A     EM   G+QP+VV +N +++  CK G+MD A  L+  M    V
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD  TY+T++ G+C  G ++ A +L   M   G      +YS LI G C+ K +  A  
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+  ML  G++PD   + TL  G  +   VE+A  L DEM R GV  D  TY   I+GL 
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514

Query: 321 KNGYIVEA----VELFH-----------TLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
           K+    EA     +L+H            L +   + + ++  +L+ G C  G ++ A +
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           +++S+       +   YSI+I G C  G + KA      M  +   PN  +   L+RG  
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 634

Query: 426 RINEPSKVIELLHKMKEINV---MPDASIVSIVVDL 458
              E   V+E  + ++++     + DA     ++DL
Sbjct: 635 ---EEGMVVEADNAIQDLLTCCPLADAEASKALIDL 667



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 226/438 (51%), Gaps = 8/438 (1%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F +LI+   +  R   AAA        G  P V  Y  ++  L   S       L   + 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
           +G         PN  TY  ++  LC  G +++A  ++  M+     PN VTY +++  FC
Sbjct: 146 HG-------VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198

Query: 146 YAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
            A + + A+R+   M ++G  +PN+VTFN +++ LCK G+M+ A ++ D M++ G+ PD 
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            +YNTLL G+C  G ++ +  +F  M   G    V +++ LI+  CK   +E A++L ++
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  +G++ + V    L  G  +   ++ A    +EM++ G+      Y   I+G CK G 
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A EL   +   + + D+  Y+++I G CK G L+ A +L + +    ++P+ +TYS 
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I GLC + +++ A +LF +M +  V P+  T+  LI G  +     K + L  +M    
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498

Query: 445 VMPDASIVSIVVDLLAKN 462
           V+PD    S++++ L+K+
Sbjct: 499 VLPDVVTYSVLINGLSKS 516



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 163/366 (44%), Gaps = 56/366 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     ++ ++ +     + VTFT+LI G C +  + +A     ++R  G +P V  Y
Sbjct: 307 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+     +A  L  EM           +P+ VTY+TII G CK G +D A +L
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKR------VKPDVVTYSTIISGYCKVGNLDSAFQL 420

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K + P+ +TY+S+IRG C  K  N+A  LF  M+  GVQP+  T+  ++D  CK
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYN--------------------------------- 208
            G +++A  L D MI+ GV PD  TY+                                 
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIK 540

Query: 209 -----------------TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
                             LL GFC+ G +  A +++ SM     K     YSILI+G+C+
Sbjct: 541 YDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCR 600

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              +  ALS + +ML  G  P+     +L  GLFE   V  A     ++      AD   
Sbjct: 601 GGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEA 660

Query: 312 YRTFID 317
            +  ID
Sbjct: 661 SKALID 666



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 21/238 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  ++LK    PDA+T++SLI+GLC E R+ +A  LF  +   G +PD FT
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL++G C+  +   AL+L +EM       GV+  P+ VTY+ +I+GL K     +A  
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRK----GVL--PDVVTYSVLINGLSKSARTKEAHR 524

Query: 121 LLLQMKDKNIKPNVVTY---------------TSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           LL ++  ++  P+ + Y                ++++GFC      EA +++  M+D+  
Sbjct: 525 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW 584

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           + +   +++++   C+ G + +A      M++ G  P++ +  +L+ G    G V  A
Sbjct: 585 KLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 134/403 (33%), Positives = 219/403 (54%), Gaps = 8/403 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD+ T+ +LI+GLC   R   A  +   +   GC PDV TYT L+   C+ S    A+ L
Sbjct: 154 PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL 213

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            +EM A G       C P+ +TY  +++G+C+EG VD A E L  +     +PN V+Y  
Sbjct: 214 LDEMRAKG-------CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C A+ W +A++L  EM  +G  PNVVTFN+++  LC+ G ++ A  +LD + ++G
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P++ +YN +L  FC   +++ A      M S GC   + SY+ L+   C+  E++ A+
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  ++  KG  P ++ +NT+  GL +  + + A +L +EM   G+  D  TY T   GL
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C+   I EA+  F  ++ +    +   YN+++ GLCK      A++LF  +     +PN 
Sbjct: 447 CREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNE 506

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            TY+I+I GL  +G + +AR+L  ++    VV   +     IR
Sbjct: 507 STYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIR 549



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 221/433 (51%), Gaps = 14/433 (3%)

Query: 27  TSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
            +LIK LCA  R  EA  +        CEPDV  Y  +V G C T     A  L  +M  
Sbjct: 98  AALIKKLCASGRTAEARRVLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM 152

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                    EP++ TY T+I GLC  G    A  +L  M  +   P+VVTYT ++   C 
Sbjct: 153 ---------EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCK 203

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              + +A +L  EM  +G  P+++T+NV+++ +C+ G++D+A   L  +  HG  P+  +
Sbjct: 204 RSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVS 263

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YN +L G C   R   A++L   M   G    V ++++LI+  C+   +E A+ +  ++ 
Sbjct: 264 YNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIP 323

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G  P+ + +N +     +  +++RA    + M   G   D  +Y T +  LC+ G + 
Sbjct: 324 KYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVD 383

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            AVEL H L+   C   + +YN++IDGL K+G+ + ALEL   +    L P+++TYS + 
Sbjct: 384 AAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTIS 443

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC + ++++A   F  +++  + PN + ++ ++ G  +  E    I+L   M     M
Sbjct: 444 SGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCM 503

Query: 447 PDASIVSIVVDLL 459
           P+ S  +I+++ L
Sbjct: 504 PNESTYTILIEGL 516



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 227/447 (50%), Gaps = 10/447 (2%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L +C  PD + + +++ G C   ++  A  L   + +   EPD +TY TL+ GLC   
Sbjct: 115 RVLAAC-EPDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRG 170

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
            T  AL + ++M          C P+ VTYT +++  CK     +A +LL +M+ K   P
Sbjct: 171 RTGNALVVLDDMLRRG------CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAP 224

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +++TY  V+ G C     ++A      +   G +PN V++N+++  LC   + ++A +L+
Sbjct: 225 DIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLM 284

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M Q G  P+  T+N L+   C  G V  A E+   +   GC     SY+ +++ +CK 
Sbjct: 285 AEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQ 344

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           K+++ A++    M+S+G  PD+V +NTL   L    +V+ A +L  +++  G      +Y
Sbjct: 345 KKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISY 404

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T IDGL K G   EA+EL + +     + DI  Y+++  GLC+  R+E A+  F  +  
Sbjct: 405 NTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQD 464

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + PN V Y+ ++ GLC   +   A DLF+ M  N  +PN  T+ +LI G        +
Sbjct: 465 MGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKE 524

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLL 459
             ELL ++    V+    I    + LL
Sbjct: 525 ARELLGELCSRGVVSKGLINKAAIRLL 551



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 193/369 (52%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR  +  VVL  +L+    PD VT+T L++  C  S   +A  L  ++R  GC PD+ TY
Sbjct: 170 GRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITY 229

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +VNG+C+      A+   + + +        CEPNTV+Y  ++ GLC     + A++L
Sbjct: 230 NVVVNGICQEGRVDDAIEFLKSLPSHG------CEPNTVSYNIVLKGLCTAERWEDAEKL 283

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M  K   PNVVT+  +I   C       A  +  ++   G  PN +++N I+   CK
Sbjct: 284 MAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCK 343

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             KMD A   ++LM+  G  PD  +YNTLL   C  G V+ A EL   ++  GC   + S
Sbjct: 344 QKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLIS 403

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K  + + AL L +EM++KG++PD++ ++T+  GL    ++E A + F ++Q
Sbjct: 404 YNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQ 463

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +T  Y   + GLCK      A++LF  +    C  +   Y  LI+GL   G ++
Sbjct: 464 DMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVK 523

Query: 362 IALELFRSL 370
            A EL   L
Sbjct: 524 EARELLGEL 532


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/408 (34%), Positives = 225/408 (55%), Gaps = 20/408 (4%)

Query: 33  LCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFG 92
           +C   ++ E       +   G + +  +Y TL++GLC+   T  A+ +   +       G
Sbjct: 59  VCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNID------G 112

Query: 93  VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
           ++ +PN V Y+TII  LCK+  V  A +L  QM  K I P+V+TY +++ G        E
Sbjct: 113 LLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKE 172

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  LF +M+ + ++P++ TFN+++D LCK G+M +A  +L +MI+  V PD  TYN+L+D
Sbjct: 173 AVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMD 232

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+ L  + N A  +F +M   G    V SYS++ING CK K ++ A++L  EM SK + P
Sbjct: 233 GYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAP 292

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           + V +++L  GL +  ++  A+ L +EM   G  AD  TY + +D LCKN  + +A+ L 
Sbjct: 293 NTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLL 352

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             ++    + DI  Y  L+DGLCK+GRL+ A E+++ L              +I G   D
Sbjct: 353 TKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQIL--------------LIKGYHLD 398

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
              DKA  L   ME+N   PN +TF++LIR     +   K +ELL +M
Sbjct: 399 SLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREM 446



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 224/446 (50%), Gaps = 14/446 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP    F  +   L   +      +L  ++ + G + D+     LVN  C      +   
Sbjct: 5   TPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDK 64

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + E +   +       + N V+Y T+IDGLCK G    A ++L  +    ++PNVV Y++
Sbjct: 65  VKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYST 124

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C  K   +A  L+ +M+ + + P+V+T+N +M      G++ EA  L + M+   
Sbjct: 125 IIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKN 184

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           ++PD +T+N L+DG C  G +  A+ +   M        V +Y+ L++GY   K+   A 
Sbjct: 185 IKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKAT 244

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +++ M  +G+ PDV  ++ +  GL +   V+ A  L  EM    +A +T TY + IDGL
Sbjct: 245 FVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGL 304

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K+G I +A +L + +       D+  YNSL+D LCK+ +++ A+ L   +    + P++
Sbjct: 305 HKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDI 364

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+I++ GLC +G++  A++++  +              LI+G+   +   K + LL K
Sbjct: 365 YTYTILVDGLCKNGRLKDAQEVYQIL--------------LIKGYHLDSLFDKALSLLSK 410

Query: 440 MKEINVMPDASIVSIVVDLLAKNEIS 465
           M++    P+     I++  L +N+++
Sbjct: 411 MEDNGCTPNPVTFEILIRALFENDMN 436



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 195/392 (49%), Gaps = 20/392 (5%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++   F  + V++ +LI GLC       A  +   +     +P+V  Y+T++  LC+   
Sbjct: 75  VIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKL 134

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
            I A +L+ +M            P+ +TY T++ G    G + +A  L  QM  KNIKP+
Sbjct: 135 VIDAFDLYSQMLLKR------ISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPD 188

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           + T+  ++ G C   +  +A+ +   M+ Q V P+V+T+N +MD      + ++A+ + +
Sbjct: 189 IYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFN 248

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M + GV PD  +Y+ +++G C T  V+ A  L   M S        +YS LI+G  K+ 
Sbjct: 249 TMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSG 308

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            I  A  L +EM ++G   DV+ +N+L   L + HQV++A  L  +++  G+  D +TY 
Sbjct: 309 RIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYT 368

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             +DGLCKNG + +A E++  L I     D     SL D          AL L   +   
Sbjct: 369 ILVDGLCKNGRLKDAQEVYQILLIKGYHLD-----SLFDK---------ALSLLSKMEDN 414

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
              PN VT+ I+I  L  +   DKA +L  +M
Sbjct: 415 GCTPNPVTFEILIRALFENDMNDKAVELLREM 446



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 156/305 (51%), Gaps = 20/305 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +  ++L     PD  TF  L+ GLC E  + +A  +   +     +PDV T
Sbjct: 167 VGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVIT 226

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G         A  +F  MA      GV   P+  +Y+ +I+GLCK   VD+A  
Sbjct: 227 YNSLMDGYFLVKQENKATFVFNTMA----RRGVT--PDVHSYSVMINGLCKTKMVDEAVN 280

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  K++ PN VTY+S+I G   +    +A  L  EM ++G   +V+T+N ++D LC
Sbjct: 281 LLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALC 340

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN ++D+A  LL  +   G++PD +TY  L+DG C  GR+  A+E++             
Sbjct: 341 KNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVY------------- 387

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
              +LI GY  +   + ALSL S+M   G  P+ V    L   LFE    ++A +L  EM
Sbjct: 388 -QILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREM 446

Query: 301 QRNGV 305
              G+
Sbjct: 447 IARGL 451



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 179/375 (47%), Gaps = 41/375 (10%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD------ELCKN 182
           N  P +  +  +         ++    L  +M  +G+Q ++V  N++++      ++C N
Sbjct: 3   NPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLN 62

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K+ E     D +I  G + +  +Y TL+DG C  G    A ++  +++ +  +  V  Y
Sbjct: 63  DKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMY 122

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S +I   CK+K +  A  LYS+ML K I PDV+ +NTL  G   + +++ A  LF++M  
Sbjct: 123 STIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLL 182

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D +T+   +DGLCK G + +A  +   +     + D+  YNSL+DG     +   
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENK 242

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  +F ++    + P+V +YS+MI GLC    +D+A +L  +M   ++ PN +T+  LI 
Sbjct: 243 ATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLID 302

Query: 423 GFIR----------INE------PS-------------------KVIELLHKMKEINVMP 447
           G  +          +NE      P+                   K I LL K+K+  + P
Sbjct: 303 GLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQP 362

Query: 448 DASIVSIVVDLLAKN 462
           D    +I+VD L KN
Sbjct: 363 DIYTYTILVDGLCKN 377


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/429 (33%), Positives = 226/429 (52%), Gaps = 6/429 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD VT+ SLI G      + E A+LF +++  GC PD+ TY  L+N  C+      A  
Sbjct: 321 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 380

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            F EM N NG      +PN VTY+T+ID  CKEG +  A +L + M+   + PN  TYTS
Sbjct: 381 YFSEMKN-NG-----LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTS 434

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C A +  EA +L  +M+  GV+ N+VT+  ++D LCK G+M EA  +   M++ G
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+   Y  L+ G+    R+  A ++   M     K  +  Y  +I G+C  +++E   
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 554

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +  EM S+GI  + VI  T+    F+  +   A   F EMQ  GV A   TY   IDGL
Sbjct: 555 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 614

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G +  AV+ F  +  L  + ++  Y SLIDGLCK+  +E A +LF  + C  + P++
Sbjct: 615 CKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDI 674

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             ++ +I G    G + +A  L   M E A+  ++  +  L+ GF +  E  +  +  ++
Sbjct: 675 TAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 734

Query: 440 MKEINVMPD 448
           M E  ++P+
Sbjct: 735 MIEKGILPE 743



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/438 (32%), Positives = 237/438 (54%), Gaps = 8/438 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P   T+  +I  LC E  +  +  LF ++R  G  PDV TY +L++G  +        +
Sbjct: 286 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVAS 345

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF EM +      V C P+ +TY  +I+  CK   + +A E   +MK+  +KPNVVTY++
Sbjct: 346 LFNEMKD------VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 399

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I  FC       A +LF++M   G+ PN  T+  ++D  CK G + EA +LL+ M+Q G
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V+ +  TY  LLDG C  GR+  A+E+F SM   G       Y+ L++GY K + +E A+
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 519

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +  +M    IKPD++++ ++  G     ++E    + +EM+  G++A+     T ID  
Sbjct: 520 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 579

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPN 378
            K G   +A+  F  ++ +  E  I  Y  LIDGLCK+G +E+A++ F R L  G L PN
Sbjct: 580 FKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG-LQPN 638

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V  Y+ +I GLC +  ++ A+ LF +M+   + P++  F  LI G ++     + + L+ 
Sbjct: 639 VAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 698

Query: 439 KMKEINVMPDASIVSIVV 456
           +M E+ +  D  + + +V
Sbjct: 699 RMTELAIEFDLHVYTSLV 716



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 214/414 (51%), Gaps = 6/414 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++   F     +  +   P+ VT+++LI   C E  +  A  LF  +R  G  P+ FTYT
Sbjct: 374 KMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYT 433

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++  C+  +   A  L  +M       GV  + N VTYT ++DGLCK G + +A+E+ 
Sbjct: 434 SLIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIVTYTALLDGLCKAGRMIEAEEVF 487

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M    I PN   YT+++ G+  A+   +A ++  +M +  ++P+++ +  I+   C  
Sbjct: 488 RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQ 547

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K++E   +L+ M   G+  +     T++D +   G+ + A   F  M+ +G + T+ +Y
Sbjct: 548 RKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 607

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
            +LI+G CK   +E A+  +  MLS G++P+V ++ +L  GL + + +E A KLFDEMQ 
Sbjct: 608 CVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQC 667

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  D   +   IDG  K+G + EA+ L   +  L  EFD+  Y SL+ G  + G L  
Sbjct: 668 RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ 727

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           A + F  +    ++P  V    ++      GQ+D+A +L  +ME   ++    T
Sbjct: 728 ARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 203/386 (52%), Gaps = 2/386 (0%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           +C   +  +  +     + G +++A E   +M++    P   +   ++     + +    
Sbjct: 214 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 273

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           ++ F +M+  G+ P+V T+NV++D LCK G ++ + RL   M + G+ PD  TYN+L+DG
Sbjct: 274 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 333

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +   G +     LF  M+ +GC   + +Y+ LIN YCK +++  A   +SEM + G+KP+
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 393

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV ++TL     +   ++ A KLF +M+R G+  + +TY + ID  CK G + EA +L +
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 453

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +     + +I  Y +L+DGLCK+GR+  A E+FRS+    + PN   Y+ ++ G     
Sbjct: 454 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 513

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           +M+ A  +   M E  + P++I +  +I G     +  +   +L +MK   +  +  I +
Sbjct: 514 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 573

Query: 454 IVVDLLAKNEISLNSLPSFTVHEQQE 479
            ++D   K   S ++L  F   E Q+
Sbjct: 574 TIIDAYFKAGKSSDALNFF--QEMQD 597



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 210/422 (49%), Gaps = 6/422 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           EA   F+++R F   P   +   L++ L ++ +  +    F +M       G    P+  
Sbjct: 237 EANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM------IGAGIAPSVF 290

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  +ID LCKEG ++ ++ L +QM++  + P+VVTY S+I G+       E   LF EM
Sbjct: 291 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 350

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            D G  P+++T+N +++  CK  KM  A      M  +G++P+  TY+TL+D FC  G +
Sbjct: 351 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 410

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A +LFV M   G     F+Y+ LI+  CK   +  A  L ++ML  G+K ++V +  L
Sbjct: 411 QGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 470

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +  ++  A ++F  M ++G++ +   Y   + G  K   + +A+++   +     
Sbjct: 471 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 530

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D+  Y S+I G C   +LE    +   +    +  N V  + +I      G+   A +
Sbjct: 531 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 590

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            F +M++  V   ++T+ +LI G  +       ++   +M  + + P+ ++ + ++D L 
Sbjct: 591 FFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 650

Query: 461 KN 462
           KN
Sbjct: 651 KN 652



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 172/330 (52%), Gaps = 6/330 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++  + +L  +L++    + VT+T+L+ GLC   R++EA  +F  +   G  P+   Y
Sbjct: 443 GNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVY 502

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T LV+G  +      A+ + ++M   N       +P+ + Y +II G C +  +++ K +
Sbjct: 503 TALVHGYIKAERMEDAMKILKQMTECN------IKPDLILYGSIIWGHCSQRKLEETKLI 556

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK + I  N V  T++I  +  A   ++A   F EM D GV+  +VT+ V++D LCK
Sbjct: 557 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCK 616

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++ A      M+  G++P+   Y +L+DG C    +  AK+LF  M+  G    + +
Sbjct: 617 AGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITA 676

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+G  K+  ++ AL L S M    I+ D+ ++ +L  G  +  ++ +A K F+EM 
Sbjct: 677 FTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMI 736

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
             G+  +       +    K G + EA+EL
Sbjct: 737 EKGILPEEVLCICLLREYYKRGQLDEAIEL 766


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 243/464 (52%), Gaps = 26/464 (5%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +L+    P+  T+  L++ LCA  R+ EA  +   +R  GC P+  TY TLV   CR
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR 199

Query: 71  TSHTIVA---LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
                 A   ++L  E  N         +PN VT+ ++++GLCK G ++ A+++  +M  
Sbjct: 200 AGELDGAERVVSLMREEGNA--------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + + P+VV+Y +++ G+C     +E+  +F EM  +G+ P+VVTF  ++   CK G +++
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  L+  M + G+R +  T+  L+DGFC  G ++ A      M   G + +V  Y+ LIN
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           GYCK   ++ A  L  EM +K +KPDVV ++T+  G  ++  ++ AF+L  +M + GV  
Sbjct: 372 GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D  TY + I GLC+   + +A ELF  +  L  + D   Y +LIDG CK G +E AL L 
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 491

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD--------- 418
             +    ++P+VVTYS++I GL    +  +A  L   +     VP+ I +D         
Sbjct: 492 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 551

Query: 419 ------MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
                  L++GF       +  ++   M + N   D S+ SI++
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILI 595



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 242/475 (50%), Gaps = 23/475 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFT 60
           GR+     V+G +  +   P+AVT+ +L+   C    +  A  + + +R  G  +P++ T
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT 225

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + ++VNGLC+      A  +F+EM            P+ V+Y T++ G CK G + ++  
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREG------LAPDVVSYNTLLSGYCKVGCLHESLA 279

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  + + P+VVT+TS+I   C A +  +A  L  +M ++G++ N VTF  ++D  C
Sbjct: 280 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 339

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +D+A   ++ M + G++P    YN L++G+C  GR++ A+EL   ME+   K  V 
Sbjct: 340 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS +I+GYCK   ++ A  L  +ML KG+ PD + +++L  GL E  ++  A +LF+ M
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + GV  D +TY T IDG CK G + +A+ L   +       D+  Y+ LI+GL KS R 
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519

Query: 361 EIALELFRSLPCGVLVPNVVTYS---------------IMIGGLCNDGQMDKARDLFLDM 405
           + A  L   L     VP+ + Y                 ++ G C  G M +A  ++  M
Sbjct: 520 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM 579

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDLL 459
            +     +   + +LI G  R     K +    +M      P++ S +S+V  L 
Sbjct: 580 LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 634



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     V   +++    PD V++ +L+ G C    + E+ A+F+++   G  PDV T+
Sbjct: 237 GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 296

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++  C+  +   A+ L  +M     E G+    N VT+T +IDG CK+GF+D A   
Sbjct: 297 TSLIHATCKAGNLEQAVALVAQMR----ERGL--RMNEVTFTALIDGFCKKGFLDDALLA 350

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+   I+P+VV Y ++I G+C     + A+ L  EM  + V+P+VVT++ I+   CK
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A +L   M++ GV PDA TY++L+ G C   R+N A ELF +M  +G +   F+
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+CK   +E ALSL+ EM+ KG+ PDVV ++ L  GL +  + + A +L  ++ 
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530

Query: 302 RNGVAADTWTYR---------------TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                 D   Y                  + G C  G + EA +++ ++     + D   
Sbjct: 531 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 590

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           Y+ LI G C+ G +  AL   + +      PN  +   ++ GL  +G + +A +   D+
Sbjct: 591 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 234/456 (51%), Gaps = 27/456 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTF S++ GLC   R+  A  +F ++   G  PDV +Y TL++G C+      +L +
Sbjct: 221 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 280

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM     + G+V  P+ VT+T++I   CK G +++A  L+ QM+++ ++ N VT+T++
Sbjct: 281 FSEMT----QRGLV--PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC     ++A     EM   G+QP+VV +N +++  CK G+MD A  L+  M    V
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD  TY+T++ G+C  G ++ A +L   M   G      +YS LI G C+ K +  A  
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+  ML  G++PD   + TL  G  +   VE+A  L DEM R GV  D  TY   I+GL 
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514

Query: 321 KNGYIVEA----VELFH-----------TLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
           K+    EA     +L+H            L +   + + ++  +L+ G C  G ++ A +
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           +++S+       +   YSI+I G C  G + KA      M  +   PN  +   L+RG  
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 634

Query: 426 RINEPSKVIELLHKMKEINV---MPDASIVSIVVDL 458
              E   V+E  + ++++     + DA     ++DL
Sbjct: 635 ---EEGMVVEADNAIQDLLTCCPLADAEASKALIDL 667



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 226/438 (51%), Gaps = 8/438 (1%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F +LI+   +  R   AAA        G  P V  Y  ++  L   S       L   + 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
           +G         PN  TY  ++  LC  G +++A  ++  M+     PN VTY +++  FC
Sbjct: 146 HG-------VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198

Query: 146 YAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
            A + + A+R+   M ++G  +PN+VTFN +++ LCK G+M+ A ++ D M++ G+ PD 
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            +YNTLL G+C  G ++ +  +F  M   G    V +++ LI+  CK   +E A++L ++
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  +G++ + V    L  G  +   ++ A    +EM++ G+      Y   I+G CK G 
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A EL   +   + + D+  Y+++I G CK G L+ A +L + +    ++P+ +TYS 
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I GLC + +++ A +LF +M +  V P+  T+  LI G  +     K + L  +M    
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498

Query: 445 VMPDASIVSIVVDLLAKN 462
           V+PD    S++++ L+K+
Sbjct: 499 VLPDVVTYSVLINGLSKS 516



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 163/366 (44%), Gaps = 56/366 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     ++ ++ +     + VTFT+LI G C +  + +A     ++R  G +P V  Y
Sbjct: 307 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+     +A  L  EM           +P+ VTY+TII G CK G +D A +L
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKR------VKPDVVTYSTIISGYCKVGNLDSAFQL 420

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K + P+ +TY+S+IRG C  K  N+A  LF  M+  GVQP+  T+  ++D  CK
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYN--------------------------------- 208
            G +++A  L D MI+ GV PD  TY+                                 
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIK 540

Query: 209 -----------------TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
                             LL GFC+ G +  A +++ SM     K     YSILI+G+C+
Sbjct: 541 YDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCR 600

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              +  ALS + +ML  G  P+     +L  GLFE   V  A     ++      AD   
Sbjct: 601 GGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEA 660

Query: 312 YRTFID 317
            +  ID
Sbjct: 661 SKALID 666



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 21/238 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  ++LK    PDA+T++SLI+GLC E R+ +A  LF  +   G +PD FT
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL++G C+  +   AL+L +EM       GV+  P+ VTY+ +I+GL K     +A  
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRK----GVL--PDVVTYSVLINGLSKSARTKEAHR 524

Query: 121 LLLQMKDKNIKPNVVTY---------------TSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           LL ++  ++  P+ + Y                ++++GFC      EA +++  M+D+  
Sbjct: 525 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW 584

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           + +   +++++   C+ G + +A      M++ G  P++ +  +L+ G    G V  A
Sbjct: 585 KLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 146/423 (34%), Positives = 227/423 (53%), Gaps = 22/423 (5%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TPD  T+  LI   C   R+    A    +   G   +  T+T L+ GLC    T  A++
Sbjct: 84  TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMD 143

Query: 80  L-FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---NIKPNVV 135
           +    M     E G  C PN  +Y  +++GLC E    +A ELL  M D       P+VV
Sbjct: 144 IVLRRMT----ELG--CIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVV 197

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD--------- 186
           +YT+VI GF    D ++A   + EM+D+G+ P+VVT++ I+  LCK   MD         
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEG 257

Query: 187 ---EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
              E+ +L DLM++ GV+PD  TY+TL+DG+CL G+++ A +L   M S+G K    +YS
Sbjct: 258 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 317

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LINGYCK   +E AL L+ EM S G+ PD++ +N +  GLF+  +   A +L+  +  +
Sbjct: 318 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 377

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  TY   + GLCKN    +A+++F  L ++  + + R +N +ID L K GR + A
Sbjct: 378 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 437

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            +LF +     LVPN  TY +M   +   G +++   LFL ME+N    +    + ++R 
Sbjct: 438 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 497

Query: 424 FIR 426
            ++
Sbjct: 498 LLQ 500



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 174/375 (46%), Gaps = 55/375 (14%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG---VRPDAFTYN 208
           +A+ +F E++ +G   ++   N  + ++ ++      SR  + M + G   V PD  TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGADEVTPDLCTYG 91

Query: 209 -----------------------------------TLLDGFCLTGRVNHAKELFV-SMES 232
                                               LL G C   R + A ++ +  M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK---GIKPDVVIHNTLFVGLFEIHQ 289
           +GC   VFSY+ L+NG C     + AL L   M      G  PDVV + T+  G F+   
Sbjct: 152 LGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN------------GYIVEAVELFHTLRI 337
            ++A+  + EM   G+  D  TY + I  LCK             G ++E+ +LF  +  
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVR 271

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
           +  + DI  Y++LIDG C +G+++ A++L   +    L PN VTYS +I G C   +M+ 
Sbjct: 272 IGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 331

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  LF +ME + V P++IT++++++G  +    +   EL  ++ E     + S  +I++ 
Sbjct: 332 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 391

Query: 458 LLAKNEISLNSLPSF 472
            L KN+++ ++L  F
Sbjct: 392 GLCKNKLTDDALQMF 406



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 6/234 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +   +++    PD +T+++LI G C   ++ EA  L + +   G +P+  TY
Sbjct: 257 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 316

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NG C+ S    AL LF+EM +          P+ +TY  I+ GL +      AKEL
Sbjct: 317 STLINGYCKISRMEDALVLFKEMESSG------VSPDIITYNIILQGLFQTRRTAAAKEL 370

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            +++ +   +  + TY  ++ G C  K  ++A ++F  +    ++    TFN+++D L K
Sbjct: 371 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 430

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
            G+ DEA  L      +G+ P+ +TY  + +     G +    +LF+SME  GC
Sbjct: 431 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 484



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 6/183 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+ ++   G + ++ T
Sbjct: 326 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 385

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+   T  AL +F+ +   + +          T+  +ID L K G  D+AK+
Sbjct: 386 YNIILHGLCKNKLTDDALQMFQNLCLMDLKL------EARTFNIMIDALLKVGRNDEAKD 439

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L +      + PN  TY  +           E  +LF+ M D G   +    N I+ EL 
Sbjct: 440 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 499

Query: 181 KNG 183
           + G
Sbjct: 500 QRG 502


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 140/403 (34%), Positives = 224/403 (55%), Gaps = 21/403 (5%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           +I +A     KL   G   D  +Y TL++GLC+   T  AL+L + +       G + + 
Sbjct: 140 QIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVD------GKLVQL 193

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N V Y T+I G+CK+  V+ A +L  +M  K I PNVVTY+++I GF       +A  LF
Sbjct: 194 NAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLF 253

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +++ + ++P+  TFN+++D  CK+ KM E   +  +M++ G+ PD  TYN+L+DG+CL 
Sbjct: 254 NKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLV 313

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             VN AK +F +M   G    + SY+ILING+CK K+++ A++L++EM  K I P+VV +
Sbjct: 314 KEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTY 373

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N+L  GL +  ++  A +L D+M   GV  +  TY + ID L K   + +A+ L    + 
Sbjct: 374 NSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKD 433

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              +  +  Y  LIDGLCK    +I                V TY++MI G C  G  D+
Sbjct: 434 QGIQPSMYTYTILIDGLCKVEGYDIT---------------VNTYNVMIHGFCKKGLFDE 478

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           A  L   M++++ +PN +T+++ IR  +  NE  K  +L  +M
Sbjct: 479 ALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM 521



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 230/455 (50%), Gaps = 18/455 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +  R+L+   TP A  F  ++  L          +L  K+   G +P++F    L+   C
Sbjct: 73  LFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFC 132

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +    ++   + +     +    +    + V+Y T+I GLCK G    A +LL ++  K 
Sbjct: 133 QLG--LIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKL 190

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           ++ N V Y +VI G C  K  N+A  L+ EM+ +G+ PNVVT++ ++      GK+ +A 
Sbjct: 191 VQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAI 250

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L + +I   ++PD +T+N L+DGFC   ++   K +F  M   G    V +Y+ L++GY
Sbjct: 251 DLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGY 310

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C  KE+  A S+++ M   G+ PD+  +N L  G  +I +V++A  LF+EM    +  + 
Sbjct: 311 CLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNV 370

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + IDGL K+G I  A++L   +       +I  YNS+ID L K+ +++ A+ L   
Sbjct: 371 VTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITK 430

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
                + P++ TY+I+I GLC     D                 V T++++I GF +   
Sbjct: 431 FKDQGIQPSMYTYTILIDGLCKVEGYDIT---------------VNTYNVMIHGFCKKGL 475

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVV-DLLAKNE 463
             + + LL KMK+ + +P+A    I +  LL  NE
Sbjct: 476 FDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNE 510



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 196/405 (48%), Gaps = 56/405 (13%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G       +L R+       +AV + ++I G+C +  + +A  L++++   G  P+V T
Sbjct: 173 VGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVT 232

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L++G         A++LF ++   N       +P+  T+  ++DG CK+  + + K 
Sbjct: 233 YSALISGFFVVGKLKDAIDLFNKIILEN------IKPDGYTFNILVDGFCKDRKMKEGKT 286

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M  + I P+VVTY S++ G+C  K+ N AK +F  M   GV P++ ++N++++  C
Sbjct: 287 VFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFC 346

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  K+D+A  L + M    + P+  TYN+L+DG   +GR+++A +L   M   G    + 
Sbjct: 347 KIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNIL 406

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I+   K  +++ A++L ++   +GI+P +                          
Sbjct: 407 TYNSIIDALFKTHQVDKAIALITKFKDQGIQPSM-------------------------- 440

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                    +TY   IDGLCK    VE  ++            +  YN +I G CK G  
Sbjct: 441 ---------YTYTILIDGLCK----VEGYDI-----------TVNTYNVMIHGFCKKGLF 476

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           + AL L   +     +PN VTY I I  L ++ + DKA  LF +M
Sbjct: 477 DEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM 521



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 193/405 (47%), Gaps = 39/405 (9%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N ++Y++          VD A  L  ++  +N  P    +  ++     +K ++    L 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            +M  +G++PN+   N+++   C+ G    ++ +A    D ++  G   D  +Y TL+ G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C  G    A +L   ++    +     Y+ +I G CK+K +  A  LYSEM+SKGI P+
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK------------ 321
           VV ++ L  G F + +++ A  LF+++    +  D +T+   +DG CK            
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFA 289

Query: 322 ------------------NGY-----IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
                             +GY     +  A  +F+T+       DIR+YN LI+G CK  
Sbjct: 290 MMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIK 349

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           +++ A+ LF  + C  ++PNVVTY+ +I GL   G++  A  L   M +  V PN++T++
Sbjct: 350 KVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYN 409

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +I    + ++  K I L+ K K+  + P     +I++D L K E
Sbjct: 410 SIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE 454



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 160/312 (51%), Gaps = 21/312 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  +I+     PD  TF  L+ G C + ++ E   +F  +   G  PDV T
Sbjct: 243 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 302

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G C       A ++F  MA G    GV   P+  +Y  +I+G CK   VDKA  
Sbjct: 303 YNSLMDGYCLVKEVNTAKSIFNTMAQG----GV--NPDIRSYNILINGFCKIKKVDKAMN 356

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  KNI PNVVTY S+I G   +   + A +L  +M D+GV PN++T+N I+D L 
Sbjct: 357 LFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALF 416

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++D+A  L+      G++P  +TY  L+DG C               +  G   TV 
Sbjct: 417 KTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC---------------KVEGYDITVN 461

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I+G+CK    + ALSL S+M      P+ V +      L + ++ ++A KLF EM
Sbjct: 462 TYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM 521

Query: 301 QRNGVAADTWTY 312
              G+   + +Y
Sbjct: 522 ITRGLLNRSASY 533



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 171/336 (50%), Gaps = 4/336 (1%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           K N ++Y+S    F    D ++A  LF  ++ Q   P    FN I+  L K+        
Sbjct: 48  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTG----RVNHAKELFVSMESMGCKHTVFSYSILI 246
           L   M   G++P+ F  N L+  FC  G    +++ A      + ++G      SY  LI
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLI 167

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G CK  E   AL L   +  K ++ + V++NT+  G+ +   V  AF L+ EM   G++
Sbjct: 168 HGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGIS 227

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY   I G    G + +A++LF+ + +   + D   +N L+DG CK  +++    +
Sbjct: 228 PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTV 287

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  +    ++P+VVTY+ ++ G C   +++ A+ +F  M +  V P++ ++++LI GF +
Sbjct: 288 FAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCK 347

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           I +  K + L ++M   N++P+    + ++D L+K+
Sbjct: 348 IKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKS 383


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 146/423 (34%), Positives = 227/423 (53%), Gaps = 22/423 (5%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TPD  T+  LI   C   R+    A    +   G   +  T+T L+ GLC    T  A++
Sbjct: 84  TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMD 143

Query: 80  L-FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---NIKPNVV 135
           +    M     E G  C PN  +Y  +++GLC E    +A ELL  M D       P+VV
Sbjct: 144 IVLRRMT----ELG--CIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVV 197

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD--------- 186
           +YT+VI GF    D ++A   + EM+D+G+ P+VVT++ I+  LCK   MD         
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEG 257

Query: 187 ---EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
              E+ +L DLM++ GV+PD  TY+TL+DG+CL G+++ A +L   M S+G K    +YS
Sbjct: 258 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 317

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LINGYCK   +E AL L+ EM S G+ PD++ +N +  GLF+  +   A +L+  +  +
Sbjct: 318 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 377

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  TY   + GLCKN    +A+++F  L ++  + + R +N +ID L K GR + A
Sbjct: 378 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 437

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            +LF +     LVPN  TY +M   +   G +++   LFL ME+N    +    + ++R 
Sbjct: 438 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 497

Query: 424 FIR 426
            ++
Sbjct: 498 LLQ 500



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 170/324 (52%), Gaps = 16/324 (4%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V P++ T+ +++   C+ G++D     L  +I+ G R +A T+  LL G C   R + A 
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 225 ELFVS-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK---GIKPDVVIHNTL 280
           ++ +  M  +GC   VFSY+ L+NG C     + AL L   M      G  PDVV + T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN------------GYIVEA 328
             G F+    ++A+  + EM   G+  D  TY + I  LCK             G ++E+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIES 262

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            +LF  +  +  + DI  Y++LIDG C +G+++ A++L   +    L PN VTYS +I G
Sbjct: 263 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 322

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C   +M+ A  LF +ME + V P++IT++++++G  +    +   EL  ++ E     +
Sbjct: 323 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 382

Query: 449 ASIVSIVVDLLAKNEISLNSLPSF 472
            S  +I++  L KN+++ ++L  F
Sbjct: 383 LSTYNIILHGLCKNKLTDDALQMF 406



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 177/348 (50%), Gaps = 16/348 (4%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P++ TY  +I   C A   +        ++ +G +   +TF  ++  LC + +  +A 
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 190 RL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM---ESMGCKHTVFSYSIL 245
            + L  M + G  P+ F+YN LL+G C   R   A EL   M      G    V SY+ +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF----------- 294
           ING+ K  + + A S Y EML +GI PDVV ++++   L +   +++ +           
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIES 262

Query: 295 -KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            KLFD M R GV  D  TY T IDG C  G + EA++L   +  +  + +   Y++LI+G
Sbjct: 263 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 322

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            CK  R+E AL LF+ +    + P+++TY+I++ GL    +   A++L++ + E+     
Sbjct: 323 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 382

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + T+++++ G  +       +++   +  +++  +A   +I++D L K
Sbjct: 383 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 430



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 6/234 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +   +++    PD +T+++LI G C   ++ EA  L + +   G +P+  TY
Sbjct: 257 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 316

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NG C+ S    AL LF+EM +          P+ +TY  I+ GL +      AKEL
Sbjct: 317 STLINGYCKISRMEDALVLFKEMESSG------VSPDIITYNIILQGLFQTRRTAAAKEL 370

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            +++ +   +  + TY  ++ G C  K  ++A ++F  +    ++    TFN+++D L K
Sbjct: 371 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 430

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
            G+ DEA  L      +G+ P+ +TY  + +     G +    +LF+SME  GC
Sbjct: 431 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 484



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 6/181 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+    V+   +  S  +PD +T+  +++GL    R   A  L+ ++   G + ++ T
Sbjct: 326 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 385

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GLC+   T  AL +F+ +   + +          T+  +ID L K G  D+AK+
Sbjct: 386 YNIILHGLCKNKLTDDALQMFQNLCLMDLKL------EARTFNIMIDALLKVGRNDEAKD 439

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L +      + PN  TY  +           E  +LF+ M D G   +    N I+ EL 
Sbjct: 440 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 499

Query: 181 K 181
           +
Sbjct: 500 Q 500


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 136/407 (33%), Positives = 223/407 (54%), Gaps = 10/407 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA T+ +LI+GLC   R   A A+  ++    C PDV TYT L+   C+ S    A+ L
Sbjct: 156 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 215

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM +        C P+ VTY  +++G+C+EG VD A E L  +     +PN V+Y  V
Sbjct: 216 LDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 269

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G C A+ W +A+ L  EM  +G  PNVVTFN+++  LC+ G ++ A  +L+ + ++G 
Sbjct: 270 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 329

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P++ +YN LL  FC   +++ A      M S GC   + SY+ L+   C++ E++ A+ 
Sbjct: 330 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 389

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  ++  KG  P ++ +NT+  GL +  + + A +L +EM   G+  D  TY T   GLC
Sbjct: 390 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 449

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           +   I +A+  F  ++ +    +   YN++I GLCK      A++LF  +     +PN  
Sbjct: 450 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 509

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
           TY+I+I GL  +G + +ARDL  ++    VV       ++ +G IR+
Sbjct: 510 TYTILIEGLAYEGLIKEARDLLDELCSRGVVRK----SLINKGAIRL 552



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 229/448 (51%), Gaps = 14/448 (3%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R++ S   PDA T  +LIK L A  R  EA  +        C PDV  Y  +V G C   
Sbjct: 86  RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMVAGYCGAG 140

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A  L  EM           EP+  TY T+I GLC  G    A  +L +M  +   P
Sbjct: 141 QLDAARRLVAEMP---------VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVP 191

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +VVTYT ++   C    + +A +L  EM D+G  P++VT+NV+++ +C+ G++D+A   L
Sbjct: 192 DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL 251

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             +  +G  P+  +YN +L G C   R   A+EL   M   GC   V ++++LI+  C+ 
Sbjct: 252 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 311

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +E AL +  ++   G  P+ + +N L     +  ++++A    D M   G   D  +Y
Sbjct: 312 GLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 371

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T +  LC++G +  AVEL H L+   C   + +YN++IDGL K+G+ + ALEL   +  
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 431

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L P+++TYS +  GLC + +++ A   F  +++  + PN + ++ +I G  +  E   
Sbjct: 432 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 491

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLA 460
            I+L   M     MP+ S  +I+++ LA
Sbjct: 492 AIDLFAYMIGNGCMPNESTYTILIEGLA 519



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 197/369 (53%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR ++   VL  +L+    PD VT+T L++  C  S   +A  L  ++R  GC PD+ TY
Sbjct: 172 GRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +VNG+C+      A+   + + +    +G  CEPNTV+Y  ++ GLC     + A+EL
Sbjct: 232 NVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTVSYNIVLKGLCTAERWEDAEEL 285

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M  K   PNVVT+  +I   C       A  +  ++   G  PN +++N ++   CK
Sbjct: 286 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 345

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             KMD+A   LDLM+  G  PD  +YNTLL   C +G V+ A EL   ++  GC   + S
Sbjct: 346 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 405

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K  + + AL L +EM+SKG++PD++ ++T+  GL    ++E A + F ++Q
Sbjct: 406 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 465

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +T  Y   I GLCK      A++LF  +    C  +   Y  LI+GL   G ++
Sbjct: 466 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK 525

Query: 362 IALELFRSL 370
            A +L   L
Sbjct: 526 EARDLLDEL 534



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 208/427 (48%), Gaps = 16/427 (3%)

Query: 49  LRVFGC--EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTII 106
           LR+ G    PD  T   L+  L  +  T  A  +              C P+ + Y  ++
Sbjct: 85  LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----------AACGPDVMAYNAMV 133

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
            G C  G +D A+ L+ +M    ++P+  TY ++IRG C       A  +  EM+ +   
Sbjct: 134 AGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV 190

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P+VVT+ ++++  CK     +A +LLD M   G  PD  TYN +++G C  GRV+ A E 
Sbjct: 191 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 250

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
             ++ S GC+    SY+I++ G C  +  E A  L  EM  KG  P+VV  N L   L  
Sbjct: 251 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 310

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              VE A ++ +++ + G   ++ +Y   +   CK   + +A+     +    C  DI +
Sbjct: 311 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 370

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           YN+L+  LC+SG +++A+EL   L      P +++Y+ +I GL   G+  +A +L  +M 
Sbjct: 371 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 430

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
              + P++IT+  +  G  R +     I    K++++ + P+  + + ++  L K   + 
Sbjct: 431 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 490

Query: 467 NSLPSFT 473
           +++  F 
Sbjct: 491 SAIDLFA 497



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+       G++      P+ V + ++I GLC       A  LF  +   GC P+  TYT
Sbjct: 453 RIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYT 512

Query: 63  TLVNGLCRTSHTIVALNLFEEMAN 86
            L+ GL        A +L +E+ +
Sbjct: 513 ILIEGLAYEGLIKEARDLLDELCS 536


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 154/454 (33%), Positives = 236/454 (51%), Gaps = 11/454 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            TP   T++ LI GLC  S + +A  +  ++   G +P+VF Y TL+    + S   +A+
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 79  NLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
            L + M ANG         P+   Y  +I GLC+   V++AK LL+ M +K IKPN  TY
Sbjct: 507 ELLKIMIANG-------VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            + I  +  + +   A+R F +M+  G+ PN V + +++   C  G   EA      M++
Sbjct: 560 GAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE 619

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ PD   Y+ ++      G+   A  +F+     G    VF Y+ LI+G+CK  +IE 
Sbjct: 620 KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEK 679

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLF--VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           A  LY EML  GI P++V++NTL    G  +   +  AFKLFDEM   G++ D + Y   
Sbjct: 680 ASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 739

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           IDG  K G + +A+ LFH  +  K    + A+NSLID  CK G++  A ELF  +    L
Sbjct: 740 IDGCGKEGNLEKALSLFHEAQ-QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKL 798

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN+VTY+I+I        M++A  LFLDME   ++PN +T+  L+  + +I    K+I 
Sbjct: 799 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS 858

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           L   M+   +  DA    ++     K   SL +L
Sbjct: 859 LFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 892



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 249/518 (48%), Gaps = 48/518 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V  G +VL  + K C  P+  T+ + I GLC    + EA  +   +   G  PD  T
Sbjct: 255 VGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHT 313

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT LV+G C+   +  A  +FE M +          PN  TYT +IDG  KEG +++A  
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSG------LNPNRFTYTALIDGFIKEGNIEEALR 367

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  + +K NVVTY ++I G   A +  +A  LF EM+  G++P+  T+N+++D   
Sbjct: 368 IKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYL 427

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+  M +A  LL  M    + P  FTY+ L+ G C +  +  A E+   M   G K  VF
Sbjct: 428 KSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVF 487

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y  LI  Y +    E A+ L   M++ G+ PD+  +N L +GL    +VE A  L  +M
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELF---------------------------- 332
              G+  +  TY  FI+   K+G I  A   F                            
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607

Query: 333 -HTLRILKCEF------DIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSI 384
              L   KC        DIRAY+++I  L K+G+ + A+ +F + L  GV VP+V  Y+ 
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV-VPDVFLYNS 666

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR--GFIRINEPSKVIELLHKMKE 442
           +I G C +G ++KA  L+ +M  N + PN++ ++ LI   G+ +    ++  +L  +M  
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS 726

Query: 443 INVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
             + PD  I  I++D   K      +L  F  HE Q++
Sbjct: 727 KGISPDGYIYCILIDGCGKEGNLEKALSLF--HEAQQK 762



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 231/487 (47%), Gaps = 35/487 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     V   +++    PD  T+T L+ G C + R  EA  +F  +   G  P+ FTY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC-------------------------- 95
           T L++G  +  +   AL + +EM     +  VV                           
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 96  ---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              EP+T TY  +IDG  K   + KA ELL +MK + + P+  TY+ +I G C++ D  +
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  +  +M+  GV+PNV  +  ++    +  + + A  LL +MI +GV PD F YN L+ 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C   +V  AK L V M   G K    +Y   IN Y K+ EI+ A   + +MLS GI P
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           + VI+  L  G  ++     A   F  M   G+  D   Y   I  L KNG   EA+ +F
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 333 HTLRILKCEF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG--G 388
             L+ LK     D+  YNSLI G CK G +E A +L+  +    + PN+V Y+ +I   G
Sbjct: 650 --LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYG 707

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C  G + +A  LF +M    + P+   + +LI G  +     K + L H+ ++ +V   
Sbjct: 708 YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSL 767

Query: 449 ASIVSIV 455
           ++  S++
Sbjct: 768 SAFNSLI 774



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 231/440 (52%), Gaps = 9/440 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V G ++++   PD  T+T++IK  C    +++   + +++    C+P++FTY   + GLC
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLC 287

Query: 70  RTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           +T     AL + +  M  G G       P+  TYT ++DG CK+    +AK +   M   
Sbjct: 288 QTGAVDEALEVKKLMMEKGLG-------PDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            + PN  TYT++I GF    +  EA R+  EM+ +G++ NVVT+N ++  + K G+M +A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L + M+  G+ PD +TYN L+DG+  +  +  A EL   M++     + F+YS+LI+G
Sbjct: 401 MSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C + +++ A  +  +M+  G+KP+V ++ TL     +  + E A +L   M  NGV  D
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            + Y   I GLC+   + EA  L   +     + +   Y + I+   KSG +++A   F+
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    +VPN V Y+I+I G C+ G   +A   F  M E  ++P++  +  +I    +  
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640

Query: 429 EPSKVIELLHKMKEINVMPD 448
           +  + + +  K  +  V+PD
Sbjct: 641 KTKEAMGVFLKFLKTGVVPD 660



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/477 (31%), Positives = 240/477 (50%), Gaps = 25/477 (5%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL +++++   P+   + +LIK    ESR   A  L   +   G  PD+F Y  L+ GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R      A  L  +M    GE G+  +PN  TY   I+   K G +  A+     M    
Sbjct: 533 RAKKVEEAKMLLVDM----GEKGI--KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I PN V YT +I+G C   +  EA   F  M+++G+ P++  ++ I+  L KNGK  EA 
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN-- 247
            +    ++ GV PD F YN+L+ GFC  G +  A +L+  M   G    +  Y+ LIN  
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDY 706

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           GYCK+  +  A  L+ EM+SKGI PD  I+  L  G  +   +E+A  LF E Q+  V +
Sbjct: 707 GYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS 766

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
            +  + + ID  CK+G ++EA ELF  +   K   +I  Y  LID   K+  +E A +LF
Sbjct: 767 LS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 825

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    ++PN +TY+ ++      G   K   LF DME   +  + I + ++   + + 
Sbjct: 826 LDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKE 885

Query: 428 NEPSKVIELLHK-----MKEINVMPDASI--------VSIVVDLLA---KNEISLNS 468
            +  + ++LL+K     +K  + + DA I        +S V++LL+   K E+SL+S
Sbjct: 886 GKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSS 942



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 202/407 (49%), Gaps = 7/407 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PDV+TYT ++   C+    I    +  EM          C+PN  TY   I GLC+ G V
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-------CKPNLFTYNAFIGGLCQTGAV 292

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A E+   M +K + P+  TYT ++ GFC  K   EAK +F  M   G+ PN  T+  +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D   K G ++EA R+ D MI  G++ +  TYN ++ G    G +  A  LF  M   G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +   ++Y++LI+GY K+ ++  A  L +EM ++ + P    ++ L  GL     +++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + D+M RNGV  + + Y T I    +      A+EL   +       D+  YN LI GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           ++ ++E A  L   +    + PN  TY   I      G++  A   F DM  + +VPN +
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + +LI+G   +    + +     M E  ++PD    S ++  L+KN
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/339 (33%), Positives = 181/339 (53%), Gaps = 1/339 (0%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M +  I P+V TYT+VI+  C   D  + K +  EM ++  +PN+ T+N  +  LC+ G
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTG 290

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +DEA  +  LM++ G+ PD  TY  L+DGFC   R   AK +F SM S G     F+Y+
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G+ K   IE AL +  EM+++G+K +VV +N +  G+ +  ++ +A  LF+EM   
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  DTWTY   IDG  K+  + +A EL   ++  K       Y+ LI GLC S  L+ A
Sbjct: 411 GIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            E+   +    + PNV  Y  +I     + + + A +L   M  N V+P++  ++ LI G
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             R  +  +   LL  M E  + P+A      ++L +K+
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 204/406 (50%), Gaps = 9/406 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L S   P+ V +T LIKG C     +EA + F  +   G  PD+  Y+ +++ L +   
Sbjct: 582 MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
           T  A+ +F +      + GVV  P+   Y ++I G CKEG ++KA +L  +M    I PN
Sbjct: 642 TKEAMGVFLKFL----KTGVV--PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695

Query: 134 VVTYTSVIR--GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           +V Y ++I   G+C + +  EA +LF EM+ +G+ P+   + +++D   K G +++A  L
Sbjct: 696 IVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSL 755

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
                Q  V   +  +N+L+D FC  G+V  A+ELF  M        + +Y+ILI+ Y K
Sbjct: 756 FHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 814

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            + +E A  L+ +M ++ I P+ + + +L +   +I    +   LF +M+  G+A D   
Sbjct: 815 AEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 874

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y       CK G  +EA++L +   +   + +   +++LI  LCK  ++   LEL   + 
Sbjct: 875 YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 934

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
              L  +  T + ++ G    G  D+A  +   M+    VP  ++ 
Sbjct: 935 KEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSL 980



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 214/434 (49%), Gaps = 15/434 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T+ + I        I  A   F  +   G  P+   YT L+ G C   +T+ AL+ 
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+ M     E G++  P+   Y+ II  L K G   +A  + L+     + P+V  Y S+
Sbjct: 614 FKCML----EKGLI--PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL--CKNGKMDEASRLLDLMIQH 198
           I GFC   D  +A +L+ EM+  G+ PN+V +N ++++   CK+G + EA +L D MI  
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELF--VSMESMGCKHTVFSYSILINGYCKNKEIE 256
           G+ PD + Y  L+DG    G +  A  LF     +S+G   ++ +++ LI+ +CK+ ++ 
Sbjct: 728 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG---SLSAFNSLIDSFCKHGKVI 784

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L+ +M+ K + P++V +  L     +   +E A +LF +M+   +  +T TY + +
Sbjct: 785 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLL 844

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVL 375
               + G   + + LF  +       D  AY  +    CK G+   AL+L  +SL  G+ 
Sbjct: 845 LSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIK 904

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           + + V +  +I  LC + Q+    +L  +M +  +  +  T + L+ GF +     +  +
Sbjct: 905 LEDDV-FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 963

Query: 436 LLHKMKEINVMPDA 449
           +L  M+ +  +P +
Sbjct: 964 VLGVMQRLGWVPTS 977



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 172/399 (43%), Gaps = 51/399 (12%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP-----------------NVVTYTSVIRG 143
           +Y+ +   LC  G + +A  +L ++      P                 N+  +   I  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           F      NEA  +FI  + +G  P ++  N +M +L K   M    ++   M++  + PD
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 204 AFTY----------------------------------NTLLDGFCLTGRVNHAKELFVS 229
            +TY                                  N  + G C TG V+ A E+   
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKL 301

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G      +Y++L++G+CK K  + A  ++  M S G+ P+   +  L  G  +   
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           +E A ++ DEM   G+  +  TY   I G+ K G + +A+ LF+ + +   E D   YN 
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNL 421

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LIDG  KS  +  A EL   +    L P+  TYS++I GLC+   + KA ++   M  N 
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           V PNV  +  LI+ +++ +     IELL  M    V+PD
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 30/333 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V  + LK+   PD   + SLI G C E  I +A+ L+ ++   G  P++  Y
Sbjct: 640 GKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVY 699

Query: 62  TTLVN--GLCRTSHTIVALNLFEEMA---------------NGNGEFGVV---------C 95
            TL+N  G C++ +   A  LF+EM                +G G+ G +          
Sbjct: 700 NTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA 759

Query: 96  EPNTV----TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
           +  +V     + ++ID  CK G V +A+EL   M DK + PN+VTYT +I  +  A+   
Sbjct: 760 QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMME 819

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           EA++LF++M  + + PN +T+  ++    + G   +   L   M   G+  DA  Y  + 
Sbjct: 820 EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMA 879

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
             +C  G+   A +L       G K     +  LI   CK K+I   L L SEM  + + 
Sbjct: 880 SAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELS 939

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
                 NTL +G ++    + A K+   MQR G
Sbjct: 940 LSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLG 972



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 27/250 (10%)

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
           S   M     + SYSIL    C +  I  A ++  ++L    KP + I ++L        
Sbjct: 110 SSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTR-KPPLEILDSLV------- 161

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD-IRAY 347
              R ++ F         ++   +  FID     G++ EA  +F    I +  F  +   
Sbjct: 162 ---RCYREFG-------GSNLTVFDIFIDKFRVLGFLNEASSVF-IASISEGFFPTLICC 210

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+L+  L K+  + +  +++ S+    +VP+V TY+ +I   C  G + K + +  +ME+
Sbjct: 211 NNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK 270

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS-- 465
               PN+ T++  I G  +     + +E+   M E  + PD    +++VD   K + S  
Sbjct: 271 ECK-PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 466 ----LNSLPS 471
                 S+PS
Sbjct: 330 AKLIFESMPS 339


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 138/391 (35%), Positives = 221/391 (56%), Gaps = 9/391 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T+  +I  LC  SR + A ++  K+  FG EPDV T ++L+NG C+ +    A++L 
Sbjct: 103 DLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLV 162

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M        + C+ + V Y TIIDG CK G V+ A  L  +M+   ++ + VTY S++
Sbjct: 163 SKMEE------MRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLV 216

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +   ++A RL  +M+ + + PNV+TF  +++   + GK  EA +  + MI+  + 
Sbjct: 217 TGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCID 276

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD FTYN+++ G C+ G+V+ AK++   M + GC   V +Y+ LING+CK K ++    L
Sbjct: 277 PDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKL 336

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM  +G+  D V  NT+  G F+  + + A ++F  M   G   +  TY   + GLC 
Sbjct: 337 VREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCY 393

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           N  + +A+ LF +++  + E DI  YN +I G+C  G +E A +LF SL    L P+VVT
Sbjct: 394 NWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVT 453

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           Y+ MI G C     DKA  L+  M+E+ ++P
Sbjct: 454 YTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 229/427 (53%), Gaps = 9/427 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  V F+ L+  +          +LF  + + G   D++TY  ++N LCR S  ++AL++
Sbjct: 67  PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M     +FG   EP+ VT +++I+G C+   V  A +L+ +M++   K +VV Y ++
Sbjct: 127 VGKMM----KFGY--EPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTI 180

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC     N A  LF  M   GV+ + VT+N ++  LC +G+  +A+RL+  M+   +
Sbjct: 181 IDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDI 240

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  T+  L++ F   G+   AK+ +  M        VF+Y+ +I+G C + +++ A  
Sbjct: 241 VPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQ 300

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +   M++KG  PDVV +NTL  G  +  +V+   KL  EM + G+  DT T+ T I G  
Sbjct: 301 ILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYF 360

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G    A E+F  +       +IR Y+ L+ GLC + R+E AL LF S+    +  ++ 
Sbjct: 361 QAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDIT 417

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I+I G+C  G ++ A DLF  +    + P+V+T+  +I GF R     K   L  KM
Sbjct: 418 TYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKM 477

Query: 441 KEINVMP 447
           +E  ++P
Sbjct: 478 QEDGLLP 484



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 204/368 (55%), Gaps = 9/368 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V+G+++K  + PD VT +SLI G C  +R+  A  L +K+    C+ DV  Y T+++G C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFC 185

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +T     AL LF  M       GV    +TVTY +++ GLC  G    A  L+  M  ++
Sbjct: 186 KTGLVNNALVLFGRMERD----GV--RADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRD 239

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I PNV+T+T++I  F     + EAK+ + EM+ + + P+V T+N ++  LC +G++DEA 
Sbjct: 240 IVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAK 299

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           ++LDLM+  G  PD  TYNTL++GFC T RV+   +L   M   G      +++ +I GY
Sbjct: 300 QILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGY 359

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +    + A  ++S M   G +P++  ++ L  GL    +VE+A  LF+ MQ++ +  D 
Sbjct: 360 FQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDI 416

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I G+C  G + +A +LF +L     E D+  Y ++I G C+    + A  L+R 
Sbjct: 417 TTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRK 476

Query: 370 LPCGVLVP 377
           +    L+P
Sbjct: 477 MQEDGLLP 484



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/304 (34%), Positives = 160/304 (52%), Gaps = 9/304 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V++  V+ GR+ +     D VT+ SL+ GLC   R  +AA L   + +    P+V T+
Sbjct: 188 GLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITF 247

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+N   R    + A   +EEM           +P+  TY ++I GLC  G VD+AK++
Sbjct: 248 TALINAFVREGKFLEAKKFYEEMIRR------CIDPDVFTYNSMIHGLCMHGQVDEAKQI 301

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  K   P+VVTY ++I GFC  K  +E  +L  EM  +G+  + VTFN I+    +
Sbjct: 302 LDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQ 361

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ D A  +   M   G RP+  TY+ LL G C   RV  A  LF SM+    +  + +
Sbjct: 362 AGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITT 418

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+I+G C    +E A  L+  +  KG++PDVV + T+  G       ++A  L+ +MQ
Sbjct: 419 YNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQ 478

Query: 302 RNGV 305
            +G+
Sbjct: 479 EDGL 482



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 210/441 (47%), Gaps = 13/441 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA-NGNGEFGVVCEPNT 99
           EA  LF  +      P +  ++ L++ + ++ +  + ++LF  M   G G        + 
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGH-------DL 104

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
            TY  +I+ LC+      A  ++ +M     +P+VVT +S+I GFC       A  L  +
Sbjct: 105 YTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSK 164

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M +   + +VV +N I+D  CK G ++ A  L   M + GVR D  TYN+L+ G C +GR
Sbjct: 165 MEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGR 224

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
            + A  L   M        V +++ LIN + +  +   A   Y EM+ + I PDV  +N+
Sbjct: 225 RSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNS 284

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  GL    QV+ A ++ D M   G   D  TY T I+G CK   + E  +L   +    
Sbjct: 285 MIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRG 344

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D   +N++I G  ++GR + A E+F  +      PN+ TYSI++ GLC + +++KA 
Sbjct: 345 LVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKAL 401

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            LF  M+++ +  ++ T++++I G   I       +L   +    + PD    + ++   
Sbjct: 402 VLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGF 461

Query: 460 AKNEISLNSLPSFTVHEQQEE 480
            +    L     F   + QE+
Sbjct: 462 CRKR--LWDKADFLYRKMQED 480



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 186/366 (50%), Gaps = 5/366 (1%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D+A +L   M      P++V ++ ++     +K+++    LF  M   G+  ++ T+N+
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++ LC+  +   A  ++  M++ G  PD  T ++L++GFC   RV  A +L   ME M 
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           CK  V  Y+ +I+G+CK   +  AL L+  M   G++ D V +N+L  GL    +   A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC-EFDIRAYNSLIDG 353
           +L  +M    +  +  T+   I+   + G  +EA + +  + I +C + D+  YNS+I G
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEM-IRRCIDPDVFTYNSMIHG 288

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LC  G+++ A ++   +      P+VVTY+ +I G C   ++D+   L  +M +  +V +
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVD 348

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
            +TF+ +I+G+ +   P    E+  +M      P+    SI++  L  N     +L  F 
Sbjct: 349 TVTFNTIIQGYFQAGRPDAAQEIFSRMGS---RPNIRTYSILLYGLCYNWRVEKALVLFE 405

Query: 474 VHEQQE 479
             ++ E
Sbjct: 406 SMQKSE 411


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 239/454 (52%), Gaps = 10/454 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P++VTF +L+ G   + R  +   L   +   G +P+V +Y  L+ GLC+      A  L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M +  G       P+ VTY+T++ G CK G V++++ELL ++  + ++P+ + YT V
Sbjct: 68  VRDMISRGGRS----TPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKV 123

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C +    EA  L  EM+  G  P ++TFN ++   C+   ++ A  LL  M   GV
Sbjct: 124 MASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGV 183

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + D  TYNTL+DG C  GR+  A++L   M++ GC   V +YS  + G CK+ ++  A  
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQ 243

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYRTFIDGL 319
           +  +M      P+VV +NT+  GL +  +++ A ++ ++M   +G   +   Y T +DGL
Sbjct: 244 VLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGL 303

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G   EA  +   +    C  D+  Y+SL++GLCK+G++E A+E  R +      PN 
Sbjct: 304 CKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDM-----EENAVVPNVITFDMLIRGFIRINEPSKVI 434
           VTY  ++ GLC+ G++ +A  +  +M       +   P+V T++ LI G  +       +
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDAL 423

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           +   +M+     PD    S +V+ LA++  +L +
Sbjct: 424 KFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 209/361 (57%), Gaps = 9/361 (2%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C PN+VT+  +++G  K+G     + LL  M  + I+PNVV+Y  ++ G C  + W+EA+
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 155 RLFIEMMDQGVQ--PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
            L  +M+ +G +  P++VT++ ++   CK GK++E+  LL  +I  G+RPDA  Y  ++ 
Sbjct: 66  ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C + R+  A EL   M   GC  T+ +++ LI+G C+ K +E A SL   M + G+K 
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKA 185

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           DVV +NTL  GL +  +++ A +L + M+ +G A D   Y +F+ GLCK+G ++ A ++ 
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL 245

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVLVPNVVTYSIMIGG 388
             +R    + ++  YN+++DGLCKSG+++ ALE+   +     CG+   NVV YS ++ G
Sbjct: 246 EQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL---NVVGYSTVVDG 302

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC  G+  +AR +   M      P+V+T+  L+ G  +  +  + +E + +M      P+
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362

Query: 449 A 449
           A
Sbjct: 363 A 363



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/364 (34%), Positives = 202/364 (55%), Gaps = 12/364 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  ++     PDA+ +T ++  LC  +R+ EA  L  ++   GC P + T+
Sbjct: 96  GKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITF 155

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G CR  +  +A +L + MA      GV  + + VTY T++DGLCK G + +A++L
Sbjct: 156 NTLISGCCREKNLEMADSLLQTMA----ASGV--KADVVTYNTLMDGLCKAGRLQEAEQL 209

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK     P+VV Y+S + G C +     A ++  +M D    PNVVT+N I+D LCK
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCK 269

Query: 182 NGKMDEASRLLDLMIQH-GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +GK+D A  +++ M    G   +   Y+T++DG C  GR   A+ +  +M   GC+  V 
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS L+NG CK  +IE A+    EM  +G KP+ V + +L  GL    ++  A ++ +EM
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389

Query: 301 QRNGVAAD-----TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
              G   D       TY   I GLCK G I +A++ F  +R   C+ D  +Y+++++GL 
Sbjct: 390 SSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLA 449

Query: 356 KSGR 359
           +SGR
Sbjct: 450 RSGR 453



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 203/385 (52%), Gaps = 12/385 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TPD VT+++L+ G C   ++ E+  L  ++   G  PD   YT ++  LC+++    AL 
Sbjct: 79  TPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALE 138

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L EEM          C P  +T+ T+I G C+E  ++ A  LL  M    +K +VVTY +
Sbjct: 139 LLEEMIRAG------CCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNT 192

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G C A    EA++L   M   G  P+VV ++  +  LCK+GK+  A ++L+ M    
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSD 252

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM-GCKHTVFSYSILINGYCKNKEIEGA 258
             P+  TYNT+LDG C +G+++ A E+   M S  GC   V  YS +++G CK    + A
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            S+   M   G +PDVV +++L  GL +  ++E A +   EM   G   +  TY + + G
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372

Query: 319 LCKNGYIVEAVELFHTLRIL-----KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           LC  G + EA  +   +         C   +  YN+LI GLCK+GR++ AL+ F+ +   
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKA 398
              P+ V+YS ++ GL   G+  +A
Sbjct: 433 GCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 171/326 (52%), Gaps = 22/326 (6%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++++   P  +TF +LI G C E  +  A +L   +   G + DV TY TL++GLC+   
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGR 202

Query: 74  TIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
              A  L E M A+G       C P+ V Y++ + GLCK G V  A ++L QM+D +  P
Sbjct: 203 LQEAEQLLERMKASG-------CAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDP 255

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-----GVQPNVVTFNVIMDELCKNGKMDE 187
           NVVTY +++ G C +   + A    +EMM+Q     G   NVV ++ ++D LCK G+  E
Sbjct: 256 NVVTYNTILDGLCKSGKIDTA----LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  +++ M + G RPD  TY++L++G C  G++  A E    M   GCK    +Y  L++
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 248 GYCKNKEIEGALSLYSEMLSKG-----IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           G C    +  A  +  EM S G       P V  +N L  GL +  +++ A K F  M+ 
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEA 328
            G   D  +Y T ++GL ++G  ++A
Sbjct: 432 QGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 168/340 (49%), Gaps = 39/340 (11%)

Query: 161 MDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           MD+ G  PN VTFN +++   K G+  +  RLL+ M   G++P+  +YN LL+G C   R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 220 VNHAKELFVSMESMGCKHT--VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
            + A+EL   M S G + T  + +YS L++GYCK  ++E +  L  E++S+G++PD +++
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 278 -----------------------------------NTLFVGLFEIHQVERAFKLFDEMQR 302
                                              NTL  G      +E A  L   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV AD  TY T +DGLCK G + EA +L   ++   C  D+ AY+S + GLCKSG++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDMLI 421
           A ++   +      PNVVTY+ ++ GLC  G++D A ++   M   +    NV+ +  ++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G  ++    +   ++  M      PD    S +V+ L K
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCK 340



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 141/270 (52%), Gaps = 2/270 (0%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M + G  P++ T+N L++GF   GR    + L  +M + G +  V SY+ L+ G CK + 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 255 IEGALSLYSEMLSKGIK--PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
              A  L  +M+S+G +  PD+V ++TL  G  +  +VE + +L  E+   G+  D   Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              +  LCK+  + EA+EL   +    C   +  +N+LI G C+   LE+A  L +++  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             +  +VVTY+ ++ GLC  G++ +A  L   M+ +   P+V+ +   + G  +  +   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             ++L +M++ +  P+    + ++D L K+
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKS 270



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      V+  + ++   PD VT++SL+ GLC   +I EA     ++ + GC+P+  T
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVT 365

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +LV+GLC       A  + EEM++G G     C P+  TY  +I GLCK G +D A +
Sbjct: 366 YCSLVHGLCSCGRLAEAERMVEEMSSGGGGGD-HCPPSVSTYNALIGGLCKAGRIDDALK 424

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGF 144
              +M+ +   P+ V+Y++++ G 
Sbjct: 425 FFQRMRSQGCDPDGVSYSTIVEGL 448


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 225/430 (52%), Gaps = 11/430 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P++V + +LI  LC  +R+ EA  L   + +  CEPDV T+  +++GLCR      A  L
Sbjct: 238 PNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKL 297

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M             + +TY  ++ GLC+ G VD+A+ LL    +K   PN V Y ++
Sbjct: 298 LDRMLLRG------FSTDALTYGYLMHGLCRMGQVDEARALL----NKIPNPNTVLYNTL 347

Query: 141 IRGFCYAKDWNEAKRL-FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G+  +  + EAK L +  M+  G +P+  TFN+++D L K G +  A  LL+ M+   
Sbjct: 348 ISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKR 407

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TY  L++GFC  GR+  A E+  SM + G       Y+ LI   CK+  IE AL
Sbjct: 408 FEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEAL 467

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+ EM  KG KPD+   N+L  GL + H++E A  L+ +M   GV A+T TY T +   
Sbjct: 468 QLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAF 527

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
                I +A +L   +    C  D   YN LI  LCK+G +E  L LF  +    + P +
Sbjct: 528 LMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTI 587

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           ++ +I+I GLC  G+++ A     DM    + P+++T++ LI G  ++    +   L +K
Sbjct: 588 ISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNK 647

Query: 440 MKEINVMPDA 449
           ++   + PDA
Sbjct: 648 LQSEGIRPDA 657



 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 236/460 (51%), Gaps = 11/460 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVS    +L  +   C  PD  TF  +I GLC   RI EAA L  ++ + G   D  TY 
Sbjct: 255 RVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYG 314

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++GLCR      A  L  ++ N          PNTV Y T+I G    G  ++AK+LL
Sbjct: 315 YLMHGLCRMGQVDEARALLNKIPN----------PNTVLYNTLISGYVASGRFEEAKDLL 364

Query: 123 LQ-MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M     +P+  T+  +I G         A  L  EM+ +  +PNV+T+ ++++  CK
Sbjct: 365 YNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCK 424

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++EA+ +++ M   G+  +   YN L+   C  G +  A +LF  M   GCK  +++
Sbjct: 425 QGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYT 484

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LING CKN ++E ALSLY +M  +G+  + V +NTL         +++AFKL DEM 
Sbjct: 485 FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY   I  LCK G + + + LF  +        I + N LI GLC++G++ 
Sbjct: 545 FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVN 604

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL+  + +    L P++VTY+ +I GLC  G + +A +LF  ++   + P+ IT++ LI
Sbjct: 605 DALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                    +    LL+K  +   +P+    SI+++ + K
Sbjct: 665 SRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 137/393 (34%), Positives = 203/393 (51%), Gaps = 15/393 (3%)

Query: 2   GRVSHGFVVLGRI------LKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGC 54
           G + HG   +G++      L     P+ V + +LI G  A  R  EA   L+  + + G 
Sbjct: 314 GYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGY 373

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           EPD +T+  +++GL +  + + AL L  EM           EPN +TYT +I+G CK+G 
Sbjct: 374 EPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKR------FEPNVITYTILINGFCKQGR 427

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +++A E++  M  K +  N V Y  +I   C   +  EA +LF EM  +G +P++ TFN 
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNS 487

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++ LCKN KM+EA  L   M   GV  +  TYNTL+  F +   +  A +L   M   G
Sbjct: 488 LINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRG 547

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C     +Y+ LI   CK   +E  L L+ EML KGI P ++  N L  GL    +V  A 
Sbjct: 548 CPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDAL 607

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           K   +M   G+  D  TY + I+GLCK G++ EA  LF+ L+      D   YN+LI   
Sbjct: 608 KFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRH 667

Query: 355 CKSGRLEIA-LELFRSLPCGVLVPNVVTYSIMI 386
           C  G    A L L++ +  G  +PN VT+SI+I
Sbjct: 668 CHEGMFNDACLLLYKGVDSG-FIPNEVTWSILI 699



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 225/456 (49%), Gaps = 46/456 (10%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A  +F  +   G  P V+T+  ++  LC  S    A +L  +MA         C PN+V 
Sbjct: 189 APNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHG------CVPNSVI 242

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y T+I  LC+   V +A +LL  M     +P+V T+  VI G C A   +EA +L   M+
Sbjct: 243 YQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRML 302

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G   + +T+  +M  LC+ G++DEA  LL+ +      P+   YNTL+ G+  +GR  
Sbjct: 303 LRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI----PNPNTVLYNTLISGYVASGRFE 358

Query: 222 HAKEL-FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
            AK+L + +M   G +   ++++I+I+G  K   +  AL L +EM++K  +P+V+ +  L
Sbjct: 359 EAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTIL 418

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G  +  ++E A ++ + M   G++ +T  Y   I  LCK+G I EA++LF  +    C
Sbjct: 419 INGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGC 478

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI---------------- 384
           + DI  +NSLI+GLCK+ ++E AL L+  +    ++ N VTY+                 
Sbjct: 479 KPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFK 538

Query: 385 -------------------MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
                              +I  LC  G ++K   LF +M    + P +I+ ++LI G  
Sbjct: 539 LVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLC 598

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           R  + +  ++ L  M    + PD    + +++ L K
Sbjct: 599 RTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCK 634



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 175/347 (50%), Gaps = 5/347 (1%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C+P   +Y  ++D L        A  +   M  + + P V T+  V++  C   + + A 
Sbjct: 166 CDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSAC 225

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  +M   G  PN V +  ++  LC+N ++ EA +LL+ M      PD  T+N ++ G 
Sbjct: 226 SLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGL 285

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  GR++ A +L   M   G      +Y  L++G C+  +++ A +L    L+K   P+ 
Sbjct: 286 CRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL----LNKIPNPNT 341

Query: 275 VIHNTLFVGLFEIHQVERAFK-LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           V++NTL  G     + E A   L++ M   G   D +T+   IDGL K GY+V A+EL +
Sbjct: 342 VLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLN 401

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +   + E ++  Y  LI+G CK GRLE A E+  S+    L  N V Y+ +I  LC DG
Sbjct: 402 EMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            +++A  LF +M      P++ TF+ LI G  + ++  + + L H M
Sbjct: 462 NIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDM 508



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 134/275 (48%), Gaps = 29/275 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     ++  +     + + V +  LI  LC +  I EA  LF ++   GC+PD++T+
Sbjct: 426 GRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTF 485

Query: 62  TTLVNGLCRTSHTIVALNLFEEM------ANG----------------NGEFGVV----- 94
            +L+NGLC+      AL+L+ +M      AN                    F +V     
Sbjct: 486 NSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLF 545

Query: 95  --CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
             C  + +TY  +I  LCK G V+K   L  +M  K I P +++   +I G C     N+
Sbjct: 546 RGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVND 605

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A +   +M+ +G+ P++VT+N +++ LCK G + EAS L + +   G+RPDA TYNTL+ 
Sbjct: 606 ALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLIS 665

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
             C  G  N A  L       G      ++SILIN
Sbjct: 666 RHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 152/316 (48%), Gaps = 6/316 (1%)

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR-LLDLMIQHGVRPDAFTY 207
           D+   ++L  +M D+G+      F +IM    K G   +A+R LLD+   +   P   +Y
Sbjct: 114 DFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSY 173

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N +LD          A  +F  M S G   TV+++ +++   C   E++ A SL  +M  
Sbjct: 174 NVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAK 233

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            G  P+ VI+ TL   L E ++V  A +L ++M       D  T+   I GLC+ G I E
Sbjct: 234 HGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHE 293

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A +L   + +     D   Y  L+ GLC+ G+++ A  L   +P     PN V Y+ +I 
Sbjct: 294 AAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLIS 349

Query: 388 GLCNDGQMDKARD-LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
           G    G+ ++A+D L+ +M      P+  TF+++I G ++       +ELL++M      
Sbjct: 350 GYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE 409

Query: 447 PDASIVSIVVDLLAKN 462
           P+    +I+++   K 
Sbjct: 410 PNVITYTILINGFCKQ 425


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 151/431 (35%), Positives = 232/431 (53%), Gaps = 14/431 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++  GF    R     F    ++   L+ GL  ES   +   ++ ++     E +V ++ 
Sbjct: 100 KILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFN 159

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD---KAK 119
            +VNGLC+      A ++ E+M      +GV   PN +TY T+IDG CK G +    KA 
Sbjct: 160 IVVNGLCKVGKLNRAGDVIEDMK----VWGV--SPNVITYNTLIDGYCKMGRIGKMYKAD 213

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +L +M  K I PN VTY  +I GFC  ++ + A R+F EM  QG++PNVVT+N++++ L
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C +GK+DEA  L D M+   + P+  T+N L++GFC    VN A  LF  ME  G     
Sbjct: 274 CSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNA 333

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+ YCK+  +E A +LY+ M+ +GI P+V  +N L  GL     V+ A  L +E
Sbjct: 334 MTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNE 393

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M    ++AD  TY   ID LCK G   +AV+L   +           YN+L+DG C+ G 
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGN 453

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF-- 417
           L  AL +   +       NVVT++++I G C  G+++ A  L  +M E  +VPN  T+  
Sbjct: 454 LRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI 513

Query: 418 ---DMLIRGFI 425
              +M+ +GF+
Sbjct: 514 IKEEMMEKGFV 524



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 229/440 (52%), Gaps = 9/440 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F  +++    L+       +I+     F +   +G +  + +   L++GL + S      
Sbjct: 81  FCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDME 140

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            ++ EM     E       N +++  +++GLCK G +++A +++  MK   + PNV+TY 
Sbjct: 141 FVYREMIKRKIEL------NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYN 194

Query: 139 SVIRGFCYAK---DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           ++I G+C         +A  +  EM+ +G+ PN VT+N+++D  CK+  +  A R+   M
Sbjct: 195 TLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEM 254

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            + G+RP+  TYN L++G C  G+V+ A  L   M S   +  V ++++LING+CKNK +
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTV 314

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A++L+++M  +G+ P+ + + TL     +  ++E AF L++ M   G+  +  TY   
Sbjct: 315 NEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCL 374

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I GLC+ G +  A  L + +   K   D+  YN LID LCK G    A++L   +    L
Sbjct: 375 IAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGL 434

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+ VTY+ ++ G C +G +  A  +   ME      NV+T ++LI+GF           
Sbjct: 435 NPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANG 494

Query: 436 LLHKMKEINVMPDASIVSIV 455
           LL++M E  ++P+ +   I+
Sbjct: 495 LLNEMLERGLVPNRTTYEII 514



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 188/341 (55%), Gaps = 3/341 (0%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E   +  D   K ++++   ++ G     +  + + ++ EM+ + ++ NV++FN++++ L
Sbjct: 106 EAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGL 165

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH---AKELFVSMESMGCK 236
           CK GK++ A  +++ M   GV P+  TYNTL+DG+C  GR+     A  +   M + G  
Sbjct: 166 CKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGIC 225

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +Y+ILI+G+CK++ + GA+ ++ EM  +G++P+VV +N L  GL    +V+ A  L
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            D+M  + +  +  T+   I+G CKN  + EA+ LF+ +     + +   Y +LID  CK
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            GR+E A  L+  +    + P V TY+ +I GLC  G +  AR L  +M    +  +V+T
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +++LI    +  E  K ++LL +M E  + P     + ++D
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMD 446



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 166/325 (51%), Gaps = 13/325 (4%)

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++RGF       EA   F    D G + ++++ N ++  L K  +  +   +   MI+  
Sbjct: 101 ILRGF-------EA---FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRK 150

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG-- 257
           +  +  ++N +++G C  G++N A ++   M+  G    V +Y+ LI+GYCK   I    
Sbjct: 151 IELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMY 210

Query: 258 -ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A ++  EM++KGI P+ V +N L  G  +   V  A ++F EMQR G+  +  TY   I
Sbjct: 211 KADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILI 270

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLC +G + EAV L   +     E ++  +N LI+G CK+  +  A+ LF  +    + 
Sbjct: 271 NGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVD 330

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN +TY+ +I   C DG+M+ A  L+  M +  + P V T++ LI G  R  +      L
Sbjct: 331 PNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSL 390

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
           +++M    +  D    +I++D L K
Sbjct: 391 MNEMVSKKLSADVVTYNILIDSLCK 415



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 144/272 (52%), Gaps = 16/272 (5%)

Query: 203 DAFTYNTLLDGFCLTGRVNHAK-----ELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           D+F  N++L    +   V + K     E F      G K ++ S + L++G  K  E   
Sbjct: 79  DSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGD 138

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
              +Y EM+ + I+ +V+  N +  GL ++ ++ RA  + ++M+  GV+ +  TY T ID
Sbjct: 139 MEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLID 198

Query: 318 GLCKNGYIVEAVELFHTLRILK-------CEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           G CK G I +   ++    ILK       C  ++  YN LIDG CK   +  A+ +F  +
Sbjct: 199 GYCKMGRIGK---MYKADAILKEMVAKGICPNEV-TYNILIDGFCKDENVSGAMRVFGEM 254

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               L PNVVTY+I+I GLC+DG++D+A  L   M  + + PNV+T ++LI GF +    
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTV 314

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++ I L + M++  V P+A   + ++D   K+
Sbjct: 315 NEAINLFNDMEKQGVDPNAMTYTTLIDAYCKD 346



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 121/247 (48%), Gaps = 4/247 (1%)

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C +++ +  +L+  + +N +I      +      G K  ++  N L  GL +  +     
Sbjct: 82  CVNSILA-DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDME 140

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            ++ EM +  +  +  ++   ++GLCK G +  A ++   +++     ++  YN+LIDG 
Sbjct: 141 FVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGY 200

Query: 355 CKSGR---LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           CK GR   +  A  + + +    + PN VTY+I+I G C D  +  A  +F +M+   + 
Sbjct: 201 CKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
           PNV+T+++LI G     +  + + L  +M   ++ P+    +++++   KN+    ++  
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320

Query: 472 FTVHEQQ 478
           F   E+Q
Sbjct: 321 FNDMEKQ 327


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 151/491 (30%), Positives = 246/491 (50%), Gaps = 36/491 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV  G  +L ++++    PD  T+  L+ G    +R+ +A  LF  L  +GC+P+  T
Sbjct: 277 LGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAAT 336

Query: 61  YTTLVNGLCRT-----------------SHTIV------------ALNLFEEMANGNGEF 91
           YTT++ GL                    S+T V            A  LFE++       
Sbjct: 337 YTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAG--- 393

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
              C PN V YT +IDGL K G ++   +    M   +  P   TYT VI G C A+   
Sbjct: 394 ---CSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLP 450

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A ++F +M+ +G  P+ +T+  ++D   K  KMDEA +LLD+M+  G  P A TY +++
Sbjct: 451 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 510

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            GFC    +N AKE+   M   GC+  +F ++ L++ Y      E A  + +EM ++G  
Sbjct: 511 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCA 570

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PDV+++ +L   LF   +V  A  +FD M   G A D  TY T I    K G +  A E+
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 630

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
              +       D  AYNSL+DG  K  R++ A  ++  +    + PN VT+++++ GL  
Sbjct: 631 LELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 690

Query: 392 DGQMDKARDLFLDM-EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
           DG+ D+A  LF +M E++ V P ++++ +LI G  +    S+      +M +  ++P+  
Sbjct: 691 DGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECH 750

Query: 451 IVSIVVDLLAK 461
             + ++  LAK
Sbjct: 751 TYTSLIYSLAK 761



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 219/424 (51%), Gaps = 7/424 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+  G      +  S   P   T+T +I GLC    + +A  +F ++   GC PD  TY
Sbjct: 412 GRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 471

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++G  + S    A  L + M     E      P  VTY +I+ G CK   +++AKE+
Sbjct: 472 TTLIDGFSKASKMDEARKLLDVMLTKGPE------PTAVTYGSIVHGFCKLDMINEAKEV 525

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + QM+++  +P +  +TS++  +       EA ++  EM  +G  P+V+ +  ++D L  
Sbjct: 526 IAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 585

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA  + D MI+ G  PDA TY T++  F   G V  A E+   M   G     F+
Sbjct: 586 TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFA 645

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM- 300
           Y+ L++GY K + ++ A  +Y  M++ GIKP+ V  N L  GLF+  + +RAF LF EM 
Sbjct: 646 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML 705

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +++ V     +Y   IDGL K G + EA   F  +       +   Y SLI  L K+GR+
Sbjct: 706 EKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRI 765

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A +L   +    + P+V  YS +I GL +   +D A D+F +M +    PN +T+ +L
Sbjct: 766 PEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825

Query: 421 IRGF 424
            RGF
Sbjct: 826 RRGF 829



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 221/437 (50%), Gaps = 15/437 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           PD + FT+LI G C   +      L  + L+ F   PDVF YT++++G C+         
Sbjct: 88  PDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF--RPDVFLYTSVIHGYCKAGDLDTGFK 145

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + EEM          C P+   Y  +ID LCK G VD+A EL  +M+      + VT+ +
Sbjct: 146 ILEEM------LAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMT 199

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I         +EA  L+ EM+++G +P +   + ++  LCK GK+DEA+ +   ++   
Sbjct: 200 LIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKK 259

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V      YN+L+DG+C  GRV+   +L + M        + +Y+IL+ G+ +   ++ AL
Sbjct: 260 VATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDAL 319

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  + S G KP+   + T+  GL++  ++E A   FDE      A D  +Y T I GL
Sbjct: 320 ELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE------ALDVISYTTVIKGL 373

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
             +  I EA ELF  L+   C  ++ AY ++IDGL K+GR+E  L+ F  +     VP  
Sbjct: 374 ADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTR 433

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+++I GLC    +  A  +F  M +   VP+ IT+  LI GF + ++  +  +LL  
Sbjct: 434 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 493

Query: 440 MKEINVMPDASIVSIVV 456
           M      P A     +V
Sbjct: 494 MLTKGPEPTAVTYGSIV 510



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 227/463 (49%), Gaps = 42/463 (9%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL------------- 68
           D +++T++IKGL    RI EA  LF KL+  GC P+V  YT +++GL             
Sbjct: 362 DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 421

Query: 69  ----------CRTSHTIV------------ALNLFEEMANGNGEFGVVCEPNTVTYTTII 106
                      RT++T+V            A  +FE+M          C P+T+TYTT+I
Sbjct: 422 EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG------CVPDTITYTTLI 475

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           DG  K   +D+A++LL  M  K  +P  VTY S++ GFC     NEAK +  +M ++G +
Sbjct: 476 DGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCE 535

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P +  F  ++      G+ +EA ++L  M   G  PD   Y +L+D    TGRV  A+ +
Sbjct: 536 PGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV 595

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           F SM   GC     +Y  +I  + K   +E A  +   M   G+ PD   +N+L  G  +
Sbjct: 596 FDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVK 655

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTLRILKCEFDIR 345
           + +V++AF ++D M  +G+  +  T+   + GL K+G    A  LF   L   +    + 
Sbjct: 656 LERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLV 715

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           +Y  LIDGL K+GR+  A   F+ +    ++P   TY+ +I  L   G++ +A+ L  DM
Sbjct: 716 SYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 775

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +  V P+V  +  LI G I  +      ++  +M +    P+
Sbjct: 776 VKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 818



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 223/446 (50%), Gaps = 13/446 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+   G ++L + LK  F PD   +TS+I G C    +     +  ++   GC PD   Y
Sbjct: 104 GQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAY 162

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ LC+      A  LFE M          C  + VT+ T+I+ L   G +D+A EL
Sbjct: 163 FVLIDPLCKLGRVDEAYELFERMRKSG------CLGDYVTFMTLIEALSNHGKLDEACEL 216

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M ++  +P +    S+I   C A   +EA  ++  ++ + V  + V +N +MD  CK
Sbjct: 217 YREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCK 276

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D+  +LL  M++    PD  TYN L+ GF    R++ A ELF  + S GCK    +
Sbjct: 277 LGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAAT 336

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I G    + +E A + + E L      DV+ + T+  GL +  +++ A +LF++++
Sbjct: 337 YTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLK 390

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G + +   Y   IDGL K G I + ++ F  +    C      Y  +IDGLCK+  L 
Sbjct: 391 TAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLP 450

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++F  +     VP+ +TY+ +I G     +MD+AR L   M      P  +T+  ++
Sbjct: 451 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 510

Query: 422 RGFIRINEPSKVIELLHKMKEINVMP 447
            GF +++  ++  E++ +M+E    P
Sbjct: 511 HGFCKLDMINEAKEVIAQMRERGCEP 536



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 223/458 (48%), Gaps = 12/458 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +L  +L +   PDA  +  LI  LC   R+ EA  LF ++R  GC  D  T+
Sbjct: 138 GDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTF 197

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  L        A  L+ EM     E G   EP      ++I  LCK G VD+A E+
Sbjct: 198 MTLIEALSNHGKLDEACELYREMI----ERGY--EPYLEVQDSLIFALCKAGKVDEANEI 251

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K +  + V Y S++ G+C     ++  +L ++M++    P++ T+N+++    +
Sbjct: 252 YQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSR 311

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++D+A  L  L+  +G +P+A TY T++ G     R+  AK  F   E++     V S
Sbjct: 312 ANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD--EAL----DVIS 365

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I G   +K I+ A  L+ ++ + G  P+VV +  +  GL +  ++E   K F++M 
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMS 425

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +       TY   IDGLCK   + +A ++F  +    C  D   Y +LIDG  K+ +++
Sbjct: 426 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 485

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L   +      P  VTY  ++ G C    +++A+++   M E    P +  F  L+
Sbjct: 486 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 545

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             ++      +  ++L +M      PD  + + ++DLL
Sbjct: 546 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 583



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 215/423 (50%), Gaps = 17/423 (4%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           EA     ++   G  PDV     ++NGLC+      A+ LF EM +      + CEP  V
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPS------MGCEPTIV 56

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           +Y T+I GL     +D+A +    M D   +P+V+ +T++I GFC A        L  + 
Sbjct: 57  SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQA 116

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + +  +P+V  +  ++   CK G +D   ++L+ M+  G  PDA  Y  L+D  C  GRV
Sbjct: 117 LKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRV 175

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A ELF  M   GC     ++  LI     + +++ A  LY EM+ +G +P + + ++L
Sbjct: 176 DEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSL 235

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +  +V+ A +++  +    VA     Y + +DG CK G + + ++L   L++++C
Sbjct: 236 IFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLL--LQMVEC 293

Query: 341 E--FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
           +   DI+ YN L+ G  ++ RL+ ALELF+ L      PN  TY+ +I GL +  +M++A
Sbjct: 294 DNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA 353

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           +  F    + A+  +VI++  +I+G        +  EL  K+K     P+    + V+D 
Sbjct: 354 KAFF----DEAL--DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDG 407

Query: 459 LAK 461
           L K
Sbjct: 408 LLK 410



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 227/492 (46%), Gaps = 35/492 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV   + +  R+ KS    D VTF +LI+ L    ++ EA  L+ ++   G EP +  
Sbjct: 172 LGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEV 231

Query: 61  YTTLVNGLCRTS---------HTIVALNL------FEEMANGNGEFGVV----------- 94
             +L+  LC+            T+VA  +      +  + +G  + G V           
Sbjct: 232 QDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMV 291

Query: 95  -CE--PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
            C+  P+  TY  ++ G  +   +D A EL   +     KPN  TYT++I+G   A+   
Sbjct: 292 ECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRME 351

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           EAK  F E +D      V+++  ++  L  + ++DEA  L + +   G  P+   Y  ++
Sbjct: 352 EAKAFFDEALD------VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVI 405

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           DG    GR+    + F  M    C  T  +Y+++I+G CK + +  A  ++ +M+ KG  
Sbjct: 406 DGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCV 465

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PD + + TL  G  +  +++ A KL D M   G      TY + + G CK   I EA E+
Sbjct: 466 PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEV 525

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
              +R   CE  +  + SL+      GR E A ++   +      P+V+ Y+ +I  L +
Sbjct: 526 IAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 585

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G++ +AR +F  M E    P+ +T+  +I+ F +I       E+L  M +  V PD   
Sbjct: 586 TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFA 645

Query: 452 VSIVVDLLAKNE 463
            + ++D   K E
Sbjct: 646 YNSLMDGYVKLE 657



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 186/347 (53%), Gaps = 5/347 (1%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +++A + L +M    + P+VV    V+ G C A+  ++A  LF+EM   G +P +V++N 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG--RVNHAKELFVSMES 232
           ++  L    KMDEA +  + MI +G  PD   + TL+ GFC  G  +V H   + ++   
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGH---MLLNQAL 117

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
              +  VF Y+ +I+GYCK  +++    +  EML+ G  PD   +  L   L ++ +V+ 
Sbjct: 118 KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A++LF+ M+++G   D  T+ T I+ L  +G + EA EL+  +     E  +   +SLI 
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            LCK+G+++ A E+++++    +  + V Y+ ++ G C  G++D    L L M E    P
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           ++ T+++L+ GF R N     +EL   +      P+A+  + ++  L
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGL 344



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 167/341 (48%), Gaps = 9/341 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P AVT+ S++ G C    I EA  +  ++R  GCEP +F +T+L++          A  +
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
             EM A G       C P+ + YT++ID L   G V +A+ +   M +K   P+ +TY +
Sbjct: 561 LTEMTARG-------CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 613

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I+ F    +   A  +   M   GV P+   +N +MD   K  ++D+A  + D M+  G
Sbjct: 614 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 673

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGA 258
           ++P+A T+N L+ G    G+ + A  LF  M E      T+ SY+ILI+G  K   +  A
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEA 733

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            S + EM+ +GI P+   + +L   L +  ++  A KL ++M + GV  D   Y   I G
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           L  +  +  A ++F  +    C  +   Y  L  G   +GR
Sbjct: 794 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 834



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 5/220 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V     +L  + KS   PD   + SL+ G     R+ +A  ++ ++   G +P+  T
Sbjct: 621 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 680

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  L++GL +   T  A +LF+EM   +        P  V+YT +IDGL K G V +A  
Sbjct: 681 FNVLMHGLFKDGKTDRAFSLFKEMLEKDE-----VPPTLVSYTILIDGLGKAGRVSEAFS 735

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I P   TYTS+I     A    EAK+L  +M+  GV P+V  ++ ++  L 
Sbjct: 736 QFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLI 795

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +  +D A  +   M++ G  P+  TY  L  GF   GR 
Sbjct: 796 DSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 835


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 149/431 (34%), Positives = 226/431 (52%), Gaps = 14/431 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   GF    R           +   L+ GL     I +   ++ ++     EP + ++ 
Sbjct: 108 RTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFN 167

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD---KAK 119
            ++NGLC+      A ++ E+M       GV    N +TY T+IDG CK G +    KA 
Sbjct: 168 IVINGLCKVGKLNKAGDIIEDMK----VRGV--SANVITYNTLIDGYCKMGKIGKMYKAD 221

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +L +M+   I PN VT+  +I GFC  K+ + A ++F EM  QGV+PNVVT+N +++ L
Sbjct: 222 AILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGL 281

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C NGK++EA+ L D M+   ++P+  T+N LL+GFC    V  A ELF  M   G    V
Sbjct: 282 CNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNV 341

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ILI+ YCK++ +E A +LY  ML KG+ PDV  +N L  GL     +E A  L  E
Sbjct: 342 TTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSE 401

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M    + AD  TY   ID LC  G + +A+ L   +     +     YN++IDG CK G 
Sbjct: 402 MDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGN 461

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF-- 417
           L  AL L   +     + NV TY+++I G C   +++ A  L  +M E  ++PN +T+  
Sbjct: 462 LRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEI 521

Query: 418 ---DMLIRGFI 425
              +M+ +GF+
Sbjct: 522 VTEEMMEKGFV 532



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 206/389 (52%), Gaps = 11/389 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     V   +++    P  ++F  +I GLC   ++ +A  +   ++V G   +V T
Sbjct: 141 VGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVIT 200

Query: 61  YTTLVNGLCRT---SHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           Y TL++G C+         A  + +EM A+G      +C PN VT+  +IDG CK+  V 
Sbjct: 201 YNTLIDGYCKMGKIGKMYKADAILKEMRADG------IC-PNEVTFNILIDGFCKDKNVS 253

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
            A ++  +M  + +KPNVVTY S+I G C     NEA  L  +M++  ++PN++T N ++
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           +  CKN  + +A  L D M + G+ P+  TYN L+D +C    +  A  L+  M   G  
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +Y+ LI G C+  ++E A +L SEM +K +K D++ +N L   L    ++++A +L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            DEM R G+     TY T IDG CK G +  A+ L   +  +    ++  YN LI G CK
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             +LE A  L   +    L+PN +TY I+
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIV 522



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 219/415 (52%), Gaps = 9/415 (2%)

Query: 46  FTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
           F +   +G +  V +   L++GL +         +++EM           EP  +++  +
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRR------IEPTLISFNIV 169

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE---AKRLFIEMMD 162
           I+GLCK G ++KA +++  MK + +  NV+TY ++I G+C      +   A  +  EM  
Sbjct: 170 INGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRA 229

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
            G+ PN VTFN+++D  CK+  +  A ++   M + GV+P+  TYN+L++G C  G+VN 
Sbjct: 230 DGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNE 289

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
           A  L   M +   K  + +++ L+NG+CKNK ++ A  L+ +M  +GI P+V  +N L  
Sbjct: 290 ATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILID 349

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
              +   +E AF L+  M   GV  D  TY   I GLC+ G +  A  L   +     + 
Sbjct: 350 AYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKA 409

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D+  YN LID LC  G ++ AL L   +    L P+ +TY+ MI G C +G +  A +L 
Sbjct: 410 DLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLR 469

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             ME+   + NV T+++LI+GF + ++      LL++M E  ++P+     IV +
Sbjct: 470 SQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE 524



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 195/362 (53%), Gaps = 3/362 (0%)

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           ++ GL K G +   + +  +M  + I+P ++++  VI G C     N+A  +  +M  +G
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193

Query: 165 VQPNVVTFNVIMDELCKNGK---MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           V  NV+T+N ++D  CK GK   M +A  +L  M   G+ P+  T+N L+DGFC    V+
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A ++F  M   G K  V +Y+ LING C N ++  A +L  +M++  +KP+++ HN L 
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G  +   V++A +LFD+M + G+  +  TY   ID  CK+  + +A  L+  +      
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D+  YN LI GLC+ G LE A  L   +    L  +++TY+I+I  LCN G+M KA  L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +M    + P+ +T++ +I G+ +       + L  +M+++  + + +  ++++    K
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 462 NE 463
            +
Sbjct: 494 KD 495



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E   +  D  +K +V +   ++ G     +  + + ++ EM+ + ++P +++FN++++ L
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN---HAKELFVSMESMGCK 236
           CK GK+++A  +++ M   GV  +  TYNTL+DG+C  G++     A  +   M + G  
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +++ILI+G+CK+K +  A+ +++EM  +G+KP+VV +N+L  GL    +V  A  L
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            D+M  + +  +  T+   ++G CKN  + +A ELF  +       ++  YN LID  CK
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
              +E A  L+R +    + P+V TY+ +I GLC  G ++ AR+L  +M+   +  ++IT
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
           +++LI       E  K + LL +M    + P     + ++D   K     N   +  +  
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG---NLRAALNLRS 470

Query: 477 QQEEV 481
           Q E+V
Sbjct: 471 QMEKV 475



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 164/325 (50%), Gaps = 6/325 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +L  +      P+ VTF  LI G C +  +  A  +F ++   G +P+V T
Sbjct: 214 IGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVT 273

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+NGLC       A  L ++M N         +PN +T+  +++G CK   V +A E
Sbjct: 274 YNSLINGLCNNGKVNEATALRDQMVNS------CLKPNIITHNALLNGFCKNKMVKQAGE 327

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M  + I PNV TY  +I  +C  ++  +A  L+  M+ +GV P+V T+N ++  LC
Sbjct: 328 LFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLC 387

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G ++ A  L+  M    ++ D  TYN L+D  C  G +  A  L   M   G K +  
Sbjct: 388 RKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQL 447

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I+GYCK   +  AL+L S+M   G   +V  +N L  G  +  ++E A  L +EM
Sbjct: 448 TYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEM 507

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYI 325
              G+  +  TY    + + + G++
Sbjct: 508 LEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 124/276 (44%), Gaps = 40/276 (14%)

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L VS +S  C +++    IL+  Y KN         +      G+K  V   N L  GL 
Sbjct: 82  LSVSGDSF-CANSII-VDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLV 139

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           ++ ++     ++ EM R  +     ++   I+GLCK G + +A ++   +++     ++ 
Sbjct: 140 KVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVI 199

Query: 346 AYNSLIDGLCKSGRL--------------------------------------EIALELF 367
            YN+LIDG CK G++                                        A+++F
Sbjct: 200 TYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVF 259

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    + PNVVTY+ +I GLCN+G++++A  L   M  + + PN+IT + L+ GF + 
Sbjct: 260 AEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKN 319

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
               +  EL   M +  + P+ +  +I++D   K+E
Sbjct: 320 KMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDE 355


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 150/450 (33%), Positives = 235/450 (52%), Gaps = 7/450 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L +   PDA T T  +K  C   R   A  L   L   GC+     Y T+V GL    
Sbjct: 131 RMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHG 190

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           H   A +LF+EM       G    P+  T+  ++  LC++G V ++  LL ++  + +  
Sbjct: 191 HGYNARHLFDEM------LGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSA 244

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N  T    IRG C      EA  L +E M   V P+VVT+N +M  LCK+ K+ EA++ L
Sbjct: 245 NKFTCNIWIRGLCEDGRLEEAVAL-VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYL 303

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  G  PD FTYNT++DG+C +G +  A EL       G      +Y  LING C  
Sbjct: 304 GRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAE 363

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +IE AL L++E  +K +KPD+V++N+L  GL     +  A ++ +EM   G   D WTY
Sbjct: 364 GDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTY 423

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+GLCK G I +A  + +   +     D+  +N+LIDG CK  +L+ AL+L   +  
Sbjct: 424 NIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWT 483

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + P+V+TY+ ++ GLC  G+  +  + F +M      PN IT+++LI  F +IN+  +
Sbjct: 484 YGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 543

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKN 462
              ++ +M +  ++PDA   + ++    +N
Sbjct: 544 ASGVIVRMCQDGLVPDAVSFNTLIHGFCRN 573



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 253/475 (53%), Gaps = 13/475 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     ++ R + +   PD VT+ +L++GLC +S++ EAA    ++   GC PD FTY
Sbjct: 260 GRLEEAVALVER-MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTY 318

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G C++     A  L ++        G V  P+ VTY ++I+GLC EG +++A EL
Sbjct: 319 NTIIDGYCKSGMLQEATELLKDAVFK----GFV--PDRVTYCSLINGLCAEGDIERALEL 372

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + + K++KP++V Y S+++G C       A ++  EM+++G  P++ T+N+I++ LCK
Sbjct: 373 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK 432

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A+ +++  I  G  PD FT+NTL+DG+C   +++ A +L   M + G    V +
Sbjct: 433 MGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVIT 492

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++NG CK  + +     + EM+ KG +P+ + +N L     +I+Q+E A  +   M 
Sbjct: 493 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMC 552

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++G+  D  ++ T I G C+NG +  A  LF  L           +N LI        ++
Sbjct: 553 QDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQ 612

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A ++F  +      P++ TY I++ GLC    +D+A     +M     VP++ TF  ++
Sbjct: 613 MAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRML 672

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
                 +  S+ + ++H M  + V+P+      VVD +   +    + P   V E
Sbjct: 673 NLLAMNHRVSEAVAIIHIMVRMGVVPE------VVDTILSTDKKEIAAPKILVEE 721



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 213/442 (48%), Gaps = 7/442 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V      LGR++     PD  T+ ++I G C    + EA  L       G  PD  TY 
Sbjct: 295 KVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYC 354

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L+NGLC       AL LF E    +       +P+ V Y +++ GLC++G +  A +++
Sbjct: 355 SLINGLCAEGDIERALELFNEAQAKD------LKPDLVVYNSLVKGLCRQGLILHALQVM 408

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M ++   P++ TY  +I G C   + ++A  +  + + +G  P+V TFN ++D  CK 
Sbjct: 409 NEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKR 468

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K+D A +L++ M  +G+ PD  TYN++L+G C  G+     E F  M   GC+    +Y
Sbjct: 469 LKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITY 528

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +ILI  +CK  ++E A  +   M   G+ PD V  NTL  G      ++ A+ LF ++  
Sbjct: 529 NILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDE 588

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G +A   T+   I        +  A ++F  +     + D+  Y  L+DGLCK+  ++ 
Sbjct: 589 KGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDR 648

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A      +     VP++ T+  M+  L  + ++ +A  +   M    VVP V+   +L  
Sbjct: 649 AYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVD-TILST 707

Query: 423 GFIRINEPSKVIELLHKMKEIN 444
               I  P  ++E L K   I+
Sbjct: 708 DKKEIAAPKILVEELMKKGHIS 729



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 195/435 (44%), Gaps = 10/435 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT--YTTLVNGLCRTSHTIVALNLFE 82
            + +LI+ L +  R+ +  A     R     PD     Y   +    R      A++ FE
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
            M          C P    Y  I+D L    + D+A ++ ++M    + P+  T+T  ++
Sbjct: 96  RMDL------FACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLK 149

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
            FC     + A RL   + ++G       +  ++  L  +G    A  L D M+   V P
Sbjct: 150 SFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFP 209

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D  T+N +L   C  G V  +  L   +   G     F+ +I I G C++  +E A++L 
Sbjct: 210 DVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALV 269

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            E +   + PDVV +NTL  GL +  +V+ A +    M   G   D +TY T IDG CK+
Sbjct: 270 -ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKS 328

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G + EA EL           D   Y SLI+GLC  G +E ALELF       L P++V Y
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVY 388

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++ GLC  G +  A  +  +M E    P++ T++++I G  ++   S    +++    
Sbjct: 389 NSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIV 448

Query: 443 INVMPDASIVSIVVD 457
              +PD    + ++D
Sbjct: 449 KGYLPDVFTFNTLID 463



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 176/398 (44%), Gaps = 39/398 (9%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT--YTSVIRGFCYAKDWNEAKRLFI 158
            Y  +I  L   G +D     L   +  ++ P+ +   Y + I+ +  A     A   F 
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASAR-SHLAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            M      P    +N IMD L      D+A ++   M+  GV PDA T+   L  FCLTG
Sbjct: 96  RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV---- 274
           R + A  L  S+   GC     +Y  ++ G   +     A  L+ EML + + PDV    
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215

Query: 275 -VIH------------------------------NTLFVGLFEIHQVERAFKLFDEMQRN 303
            V+H                              N    GL E  ++E A  L + M   
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY 275

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
            VA D  TY T + GLCK+  + EA +    +    C  D   YN++IDG CKSG L+ A
Sbjct: 276 -VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEA 334

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            EL +       VP+ VTY  +I GLC +G +++A +LF + +   + P+++ ++ L++G
Sbjct: 335 TELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             R       ++++++M E    PD    +I+++ L K
Sbjct: 395 LCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK 432



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 136/275 (49%), Gaps = 6/275 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +S   VV+   +   + PD  TF +LI G C   ++  A  L  ++  +G  PDV T
Sbjct: 433 MGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVIT 492

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +++NGLC+          FEEM          C PN +TY  +I+  CK   +++A  
Sbjct: 493 YNSVLNGLCKAGKAKEVNETFEEMILKG------CRPNAITYNILIENFCKINQLEEASG 546

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++++M    + P+ V++ ++I GFC   D + A  LF ++ ++G      TFN+++    
Sbjct: 547 VIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYS 606

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
               M  A ++   MI  G +PD +TY  L+DG C    V+ A      M S G   ++ 
Sbjct: 607 SKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMA 666

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           ++  ++N    N  +  A+++   M+  G+ P+VV
Sbjct: 667 TFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/426 (31%), Positives = 223/426 (52%), Gaps = 7/426 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD++T+++LI G C      +A  L  ++   G  P    Y T++ GLC       AL 
Sbjct: 30  SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            + +M          C P+ +TYT ++D LCK   +  A  +L  M +    PNVVTY +
Sbjct: 90  HYRDMQRH-------CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNT 142

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I GFC   + +EA  LF +M++    P+V T+N+++D  CK  +  + ++LL  M+++G
Sbjct: 143 LINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG 202

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TYNTL+D    +G+   A  L   M    CK + F+++++I+ +CK  +++ A 
Sbjct: 203 CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAY 262

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  M  +G  PD+  +N +  G    ++++ A +L + M   G   D  TY + + GL
Sbjct: 263 ELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 322

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   + EA E++  LR      D+   ++LIDGLCKS RL+ A +L R +      P+V
Sbjct: 323 CKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 382

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           V Y+I+I G C   Q+DK+   F +M +   VP VIT+ ++I    +         LL  
Sbjct: 383 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 442

Query: 440 MKEINV 445
           M E  V
Sbjct: 443 MLERGV 448



 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 225/436 (51%), Gaps = 11/436 (2%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+     + +  EA  LF       C PD  TY+TL+NG C+      A  L +EM    
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME--- 60

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD--KNIKPNVVTYTSVIRGFCY 146
            + G+V  P+   Y TII GLC  G VD A   L+  +D  ++  P+V+TYT ++   C 
Sbjct: 61  -KRGIV--PHNAVYNTIIKGLCDNGRVDSA---LVHYRDMQRHCAPSVITYTILVDALCK 114

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           +   ++A  +  +M++ G  PNVVT+N +++  CK G MDEA  L + M+++   PD FT
Sbjct: 115 SARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 174

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YN L+DG+C   R     +L   M   GC+    +Y+ L++   K+ +   A +L   ML
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +  KP     N +     ++ Q++ A++LF  M   G   D +TY   I G C+   I 
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A +L   +    C  D+  YNS++ GLCK+ +++ A E++  L  G    +VVT S +I
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC   ++D A  L  +ME N   P+V+ + +LI GF + ++  K +    +M +   +
Sbjct: 355 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 414

Query: 447 PDASIVSIVVDLLAKN 462
           P     SIV+D L K+
Sbjct: 415 PTVITYSIVIDKLCKS 430



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/406 (33%), Positives = 216/406 (53%), Gaps = 7/406 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
              + +L  + K    P    + ++IKGLC   R+  A   +  ++   C P V TYT L
Sbjct: 50  QQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTIL 108

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V+ LC+++    A  + E+M          C PN VTY T+I+G CK G +D+A  L  Q
Sbjct: 109 VDALCKSARISDASLILEDMIEAG------CAPNVVTYNTLINGFCKLGNMDEAVVLFNQ 162

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M + +  P+V TY  +I G+C  +   +  +L  EM+  G +PN +T+N +MD L K+GK
Sbjct: 163 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK 222

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
             +A  L  +M++   +P  FT+N ++D FC  G+++ A ELF  M   GC   +++Y+I
Sbjct: 223 YIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNI 282

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+G C+   I+ A  L   M   G  PDVV +N++  GL +  QV+ A+++++ ++  G
Sbjct: 283 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 342

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D  T  T IDGLCK+  + +A +L   +       D+ AY  LI G CK+ +L+ +L
Sbjct: 343 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL 402

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
             F  +     VP V+TYSI+I  LC   ++     L   M E  V
Sbjct: 403 AFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 174/334 (52%), Gaps = 6/334 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            R+S   ++L  ++++   P+ VT+ +LI G C    + EA  LF ++    C PDVFTY
Sbjct: 116 ARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTY 175

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C+         L +EM     ++G  CEPN +TY T++D L K G    A  L
Sbjct: 176 NILIDGYCKQERPQDGAKLLQEMV----KYG--CEPNFITYNTLMDSLVKSGKYIDAFNL 229

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  ++ KP+  T+  +I  FC     + A  LF  M D+G  P++ T+N+++   C+
Sbjct: 230 AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACR 289

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++D+A +LL+ M + G  PD  TYN+++ G C   +V+ A E++  + + G    V +
Sbjct: 290 ANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVT 349

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            S LI+G CK++ ++ A  L  EM   G  PDVV +  L  G  +  Q++++   F EM 
Sbjct: 350 CSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML 409

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             G      TY   ID LCK+  + +   L  T+
Sbjct: 410 DKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 168/305 (55%), Gaps = 6/305 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +    V+  ++L++  +PD  T+  LI G C + R  + A L  ++  +GCEP+  T
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++ L ++   I A NL + M   +      C+P+  T+  +ID  CK G +D A E
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRD------CKPSHFTFNLMIDMFCKVGQLDLAYE 263

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M D+   P++ TY  +I G C A   ++A++L   M + G  P+VVT+N I+  LC
Sbjct: 264 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++DEA  + +++   G   D  T +TL+DG C + R++ A++L   ME  G    V 
Sbjct: 324 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 383

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILI+G+CK  +++ +L+ +SEML KG  P V+ ++ +   L +  +V     L   M
Sbjct: 384 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443

Query: 301 QRNGV 305
              GV
Sbjct: 444 LERGV 448



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N LL  F    +   A +LF +     C     +YS LING+CK ++ + A  L  EM  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +GI P   ++NT+  GL +  +V+ A   + +MQR+  A    TY   +D LCK+  I +
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISD 120

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  +   +    C  ++  YN+LI+G CK G ++ A+ LF  +      P+V TY+I+I 
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           G C   +      L  +M +    PN IT++ L+   ++  +      L   M   +  P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 448 DASIVSIVVDLLAK 461
                ++++D+  K
Sbjct: 241 SHFTFNLMIDMFCK 254


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 239/455 (52%), Gaps = 26/455 (5%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA-- 77
            P+  T+  L++ LCA  R+ EA  +   +R  GC P+  TY TLV   CR      A  
Sbjct: 7   APNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAER 66

Query: 78  -LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
            ++L  E  N         +PN VT+ ++++GLCK G ++ A+++  +M  + + P+VV+
Sbjct: 67  VVSLMREEGNA--------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y +++ G+C     +E+  +F EM  +G+ P+VVTF  ++   CK G +++A  L+  M 
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G+R +  T+  L+DGFC  G ++ A      M   G + +V  Y+ LINGYCK   ++
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L  EM +K +KPDVV ++T+  G  ++  ++ AF+L  +M + GV  D  TY + I
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            GLC+   + +A ELF  +  L  + D   Y +LIDG CK G +E AL L   +    ++
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD---------------MLI 421
           P+VVTYS++I GL    +  +A  L   +     VP+ I +D                L+
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 418

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +GF       +  ++   M + N   D S+ SI++
Sbjct: 419 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILI 453



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 242/474 (51%), Gaps = 23/474 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFT 60
           GR+     V+G +  +   P+AVT+ +L+   C    +  A  + + +R  G  +P++ T
Sbjct: 24  GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT 83

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + ++VNGLC+      A  +F+EM            P+ V+Y T++ G CK G + ++  
Sbjct: 84  FNSMVNGLCKAGRMEGARKVFDEMVREG------LAPDVVSYNTLLSGYCKVGCLHESLA 137

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  + + P+VVT+TS+I   C A +  +A  L  +M ++G++ N VTF  ++D  C
Sbjct: 138 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 197

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +D+A   ++ M + G++P    YN L++G+C  GR++ A+EL   ME+   K  V 
Sbjct: 198 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 257

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS +I+GYCK   ++ A  L  +ML KG+ PD + +++L  GL E  ++  A +LF+ M
Sbjct: 258 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 317

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + GV  D +TY T IDG CK G + +A+ L   +       D+  Y+ LI+GL KS R 
Sbjct: 318 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 377

Query: 361 EIALELFRSLPCGVLVPNVVTYS---------------IMIGGLCNDGQMDKARDLFLDM 405
           + A  L   L     VP+ + Y                 ++ G C  G M +A  ++  M
Sbjct: 378 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM 437

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDL 458
            +     +   + +LI G  R     K +    +M      P++ S +S+V  L
Sbjct: 438 LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 491



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/397 (32%), Positives = 210/397 (52%), Gaps = 7/397 (1%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  P+V+TY  LV  LC       A+ +  +M       G  C PN VTY T++   C+ 
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMR------GAGCAPNAVTYNTLVAAFCRA 58

Query: 113 GFVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
           G +D A+ ++  M+++ N KPN+VT+ S++ G C A     A+++F EM+ +G+ P+VV+
Sbjct: 59  GELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +N ++   CK G + E+  +   M Q G+ PD  T+ +L+   C  G +  A  L   M 
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G +    +++ LI+G+CK   ++ AL    EM   GI+P VV +N L  G  ++ +++
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +L  EM+   V  D  TY T I G CK G +  A +L   +       D   Y+SLI
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GLC+  RL  A ELF ++    + P+  TY+ +I G C +G ++KA  L  +M    V+
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           P+V+T+ +LI G  +     +   LL K+   + +PD
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPD 395



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     V   +++    PD V++ +L+ G C    + E+ A+F+++   G  PDV T+
Sbjct: 95  GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 154

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++  C+  +   A+ L  +M     E G+    N VT+T +IDG CK+GF+D A   
Sbjct: 155 TSLIHATCKAGNLEQAVALVAQMR----ERGL--RMNEVTFTALIDGFCKKGFLDDALLA 208

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+   I+P+VV Y ++I G+C     + A+ L  EM  + V+P+VVT++ I+   CK
Sbjct: 209 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 268

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A +L   M++ GV PDA TY++L+ G C   R+N A ELF +M  +G +   F+
Sbjct: 269 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 328

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+CK   +E ALSL+ EM+ KG+ PDVV ++ L  GL +  + + A +L  ++ 
Sbjct: 329 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 388

Query: 302 RNGVAADTWTYR---------------TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                 D   Y                  + G C  G + EA +++ ++     + D   
Sbjct: 389 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 448

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           Y+ LI G C+ G +  AL   + +      PN  +   ++ GL  +G + +A +   D+
Sbjct: 449 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 507



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 234/456 (51%), Gaps = 27/456 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTF S++ GLC   R+  A  +F ++   G  PDV +Y TL++G C+      +L +
Sbjct: 79  PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 138

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM     + G+V  P+ VT+T++I   CK G +++A  L+ QM+++ ++ N VT+T++
Sbjct: 139 FSEMT----QRGLV--PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 192

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC     ++A     EM   G+QP+VV +N +++  CK G+MD A  L+  M    V
Sbjct: 193 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 252

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD  TY+T++ G+C  G ++ A +L   M   G      +YS LI G C+ K +  A  
Sbjct: 253 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 312

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+  ML  G++PD   + TL  G  +   VE+A  L DEM R GV  D  TY   I+GL 
Sbjct: 313 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 372

Query: 321 KNGYIVEA----VELFH-----------TLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
           K+    EA     +L+H            L +   + + ++  +L+ G C  G ++ A +
Sbjct: 373 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 432

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           +++S+       +   YSI+I G C  G + KA      M  +   PN  +   L+RG  
Sbjct: 433 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 492

Query: 426 RINEPSKVIELLHKMKEINV---MPDASIVSIVVDL 458
              E   V+E  + ++++     + DA     ++DL
Sbjct: 493 ---EEGMVVEADNAIQDLLTCCPLADAEASKALIDL 525



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 181/334 (54%), Gaps = 1/334 (0%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M    + PNV TY  ++R  C      EA  +  +M   G  PN VT+N ++   C+ G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 185 MDEASRLLDLMIQHG-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           +D A R++ LM + G  +P+  T+N++++G C  GR+  A+++F  M   G    V SY+
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            L++GYCK   +  +L+++SEM  +G+ PDVV   +L     +   +E+A  L  +M+  
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  +  T+   IDG CK G++ +A+     +R    +  +  YN+LI+G CK GR+++A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            EL R +    + P+VVTYS +I G C  G +D A  L   M +  V+P+ IT+  LIRG
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
                  +   EL   M ++ V PD    + ++D
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 334



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 204/367 (55%), Gaps = 1/367 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN  TY  ++  LC  G +++A  ++  M+     PN VTY +++  FC A + + A+R+
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67

Query: 157 FIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
              M ++G  +PN+VTFN +++ LCK G+M+ A ++ D M++ G+ PD  +YNTLL G+C
Sbjct: 68  VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G ++ +  +F  M   G    V +++ LI+  CK   +E A++L ++M  +G++ + V
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
               L  G  +   ++ A    +EM++ G+      Y   I+G CK G +  A EL   +
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
              + + D+  Y+++I G CK G L+ A +L + +    ++P+ +TYS +I GLC + ++
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           + A +LF +M +  V P+  T+  LI G  +     K + L  +M    V+PD    S++
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367

Query: 456 VDLLAKN 462
           ++ L+K+
Sbjct: 368 INGLSKS 374



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 163/366 (44%), Gaps = 56/366 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     ++ ++ +     + VTFT+LI G C +  + +A     ++R  G +P V  Y
Sbjct: 165 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 224

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+     +A  L  EM           +P+ VTY+TII G CK G +D A +L
Sbjct: 225 NALINGYCKLGRMDLARELIREMEAKR------VKPDVVTYSTIISGYCKVGNLDSAFQL 278

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K + P+ +TY+S+IRG C  K  N+A  LF  M+  GVQP+  T+  ++D  CK
Sbjct: 279 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 338

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYN--------------------------------- 208
            G +++A  L D MI+ GV PD  TY+                                 
Sbjct: 339 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIK 398

Query: 209 -----------------TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
                             LL GFC+ G +  A +++ SM     K     YSILI+G+C+
Sbjct: 399 YDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCR 458

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              +  ALS + +ML  G  P+     +L  GLFE   V  A     ++      AD   
Sbjct: 459 GGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEA 518

Query: 312 YRTFID 317
            +  ID
Sbjct: 519 SKALID 524



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 21/238 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  ++LK    PDA+T++SLI+GLC E R+ +A  LF  +   G +PD FT
Sbjct: 269 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 328

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL++G C+  +   AL+L +EM       GV+  P+ VTY+ +I+GL K     +A  
Sbjct: 329 YTTLIDGHCKEGNVEKALSLHDEMIRK----GVL--PDVVTYSVLINGLSKSARTKEAHR 382

Query: 121 LLLQMKDKNIKPNVVTY---------------TSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           LL ++  ++  P+ + Y                ++++GFC      EA +++  M+D+  
Sbjct: 383 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW 442

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           + +   +++++   C+ G + +A      M++ G  P++ +  +L+ G    G V  A
Sbjct: 443 KLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 143/413 (34%), Positives = 220/413 (53%), Gaps = 36/413 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    F V   ILK  + P+ +T T+LIKGLC              L+V        +
Sbjct: 108 LGQNPLSFSVFANILKKGYDPNVITLTTLIKGLC--------------LKV--------S 145

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+      AL L   +       G + +PN V Y TIID +CK   V++A +
Sbjct: 146 YGTLINGLCKVGQARAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAFD 199

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + I P+VVTY+++I GF       +A  LF +M+ + ++P+V TFN+++D  C
Sbjct: 200 LYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFC 259

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+GKM E   +  +M++ G++P+  TY +L+DG+CL  +VN A  +F +M   G      
Sbjct: 260 KDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQ 319

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+I+ING+CK K+++ A++L+ +M  K I P+VV + +L  GL +  ++  A KL DEM
Sbjct: 320 SYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEM 379

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVEL--------FHTLRILKCEFDIRAYNSLID 352
              GV  D  TY + +D LCKN  + +A+ L        F  L +     D+ AY  +I 
Sbjct: 380 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQ 439

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           G C  G    AL L   +     +P+  TY I+I  L    + D A  L  +M
Sbjct: 440 GFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 210/405 (51%), Gaps = 36/405 (8%)

Query: 44  ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
           ++F  +   G +P+V T TTL+ GLC                              V+Y 
Sbjct: 116 SVFANILKKGYDPNVITLTTLIKGLCLK----------------------------VSYG 147

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           T+I+GLCK G    A +LL ++  K ++PNVV Y ++I   C  K  NEA  L+ EM+ +
Sbjct: 148 TLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSE 207

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G+ P+VVT++ ++      GK+ +A  L + MI   ++PD +T+N L+DGFC  G++   
Sbjct: 208 GISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEG 267

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           K +F  M   G K  V +Y  L++GYC  K++  A S+++ M   G+ PD   +N +  G
Sbjct: 268 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMING 327

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
             +I +V+ A  LF +M    +  +  TY + IDGLCK+G I  A++L   +       D
Sbjct: 328 FCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPD 387

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP--------NVVTYSIMIGGLCNDGQM 395
           I  Y+S++D LCK+ +++ A+ L   L   V           +V  Y++MI G C  G  
Sbjct: 388 IITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLF 447

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           ++A  L   ME+N  +P+  T++++I    + +E     +LL +M
Sbjct: 448 NEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 188/378 (49%), Gaps = 17/378 (4%)

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
           T+ Y TII    +   V     LL Q   KN  P +  +  ++        ++ A  L  
Sbjct: 29  TLNYITIIKN-DEHNLVSSFNRLLHQ---KNPTPPIFEFGKILGSLVKINCYHTAISLHR 84

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL-- 216
           +M  +G+  N+VT N++++   + G+   +  +   +++ G  P+  T  TL+ G CL  
Sbjct: 85  QMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKV 144

Query: 217 -----------TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
                       G+   A +L   ++    +  V  Y+ +I+  CK K +  A  LYSEM
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 204

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           +S+GI PDVV ++ L  G F + +++ A  LF++M    +  D +T+   +DG CK+G +
Sbjct: 205 VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 264

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            E   +F  +     + ++  Y SL+DG C   ++  A  +F ++  G + P+  +Y+IM
Sbjct: 265 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIM 324

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G C   ++D+A +LF  M    ++PNV+T+  LI G  +  + S  ++L+ +M +  V
Sbjct: 325 INGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384

Query: 446 MPDASIVSIVVDLLAKNE 463
            PD    S ++D L KN 
Sbjct: 385 PPDIITYSSILDALCKNH 402



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 14/310 (4%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V+  F +   ++    +PD VT+++LI G     ++ +A  LF K+ +   +PDV+T+  
Sbjct: 194 VNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNI 253

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           LV+G C+         +F  M       G+  +PN VTY +++DG C    V+KA  +  
Sbjct: 254 LVDGFCKDGKMKEGKTVFAMMMKQ----GI--KPNVVTYCSLMDGYCLVKQVNKANSIFN 307

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M    + P+  +Y  +I GFC  K  +EA  LF +M  + + PNVVT+  ++D LCK+G
Sbjct: 308 TMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSG 367

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM--------GC 235
           K+  A +L+D M   GV PD  TY+++LD  C   +V+ A  L   ++          G 
Sbjct: 368 KISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGY 427

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V++Y+++I G+C       AL+L S+M   G  PD   +  + + LF+  + + A K
Sbjct: 428 NLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEK 487

Query: 296 LFDEMQRNGV 305
           L  EM   G+
Sbjct: 488 LLREMIARGL 497



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 148/279 (53%), Gaps = 16/279 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  +++     PD  TF  L+ G C + ++ E   +F  +   G +P+V T
Sbjct: 226 VGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVT 285

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G C       A ++F  MA G    GV   P+T +Y  +I+G CK   VD+A  
Sbjct: 286 YCSLMDGYCLVKQVNKANSIFNTMAQG----GV--NPDTQSYNIMINGFCKIKKVDEAMN 339

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  KNI PNVVTYTS+I G C +   + A +L  EM D+GV P+++T++ I+D LC
Sbjct: 340 LFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALC 399

Query: 181 KNGKMDEASRLL---------DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           KN ++D+A  LL         DL ++ G   D + Y  ++ GFC+ G  N A  L   ME
Sbjct: 400 KNHQVDKAIALLTKLKDQVFEDLFVK-GYNLDVYAYTVMIQGFCVKGLFNEALALLSKME 458

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
             G      +Y I+I    K  E + A  L  EM+++G+
Sbjct: 459 DNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 143/306 (46%), Gaps = 15/306 (4%)

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           + T N I   + KN + +  S    L+ Q    P  F +  +L         + A  L  
Sbjct: 27  IYTLNYI--TIIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHR 84

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI------------ 276
            ME  G    + + +ILIN + +  +   + S+++ +L KG  P+V+             
Sbjct: 85  QMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKV 144

Query: 277 -HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            + TL  GL ++ Q   A +L   +    V  +   Y T ID +CK   + EA +L+  +
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 204

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                  D+  Y++LI G    G+L+ A++LF  +    + P+V T++I++ G C DG+M
Sbjct: 205 VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 264

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            + + +F  M +  + PNV+T+  L+ G+  + + +K   + + M +  V PD    +I+
Sbjct: 265 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIM 324

Query: 456 VDLLAK 461
           ++   K
Sbjct: 325 INGFCK 330


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/481 (31%), Positives = 255/481 (53%), Gaps = 11/481 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V  R++     P   T+++L+  L     I     L  ++   G  P+++T+
Sbjct: 206 GFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTF 265

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T  +  L R      A  + + M +        C P+ VTYT +ID LC  G ++ AKEL
Sbjct: 266 TICIRILGRAGKIDEAYGILKRMDDAG------CGPDVVTYTVLIDALCNAGKLNNAKEL 319

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L+MK  + KP+ VTY +++  F    D +  K  + EM   G  P+VVTF +++D LCK
Sbjct: 320 FLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCK 379

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+DEA   LD+M + GV P+  TYNTL+ G     R++ A ELF SMES+G + T ++
Sbjct: 380 VGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYT 439

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y + I+ Y K+ E   A+  + +M + GI P++V  N     L E  ++E A + F+ ++
Sbjct: 440 YILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLK 499

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+A D  TY   +    K G + +A++L   +    C+ ++   NSLID L K+ R++
Sbjct: 500 KCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVD 559

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++F+ +    L P VVTY+ ++ GL  +G++ +A  LF  M  +   PN I+F+ L+
Sbjct: 560 EAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLL 619

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
               +  E    +++L +M E+N  PD  +  +++  L+ +N ++     +F +  Q ++
Sbjct: 620 DCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNY----AFWLFHQMKK 675

Query: 481 V 481
           V
Sbjct: 676 V 676



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 219/425 (51%), Gaps = 7/425 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   + +L R+  +   PD VT+T LI  LC   ++  A  LF K++    +PD  TY
Sbjct: 276 GKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTY 335

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++              + EM   +G       P+ VT+T +ID LCK G VD+A   
Sbjct: 336 ITLLDKFSDHGDLDAIKEFWSEM-EADGYL-----PDVVTFTILIDALCKVGKVDEAFGT 389

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  MK + + PN+ TY ++I G       +EA  LF  M   G++    T+ + +D   K
Sbjct: 390 LDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGK 449

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+  +A +  + M  +G+ P+    N  L      GR+  AKE F  ++  G      +
Sbjct: 450 SGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAIT 509

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+IL+  Y K   ++ A+ L SEM   G  P+VVI N+L   L++  +V+ A+K+F  M+
Sbjct: 510 YNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMK 569

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +A    TY T + GL K G + EA  LF  +    C  +  ++N+L+D LCK+G ++
Sbjct: 570 EMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVD 629

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL++   +      P+V+TY+ +I GL  + +++ A  LF  M++  + P+ +T   L+
Sbjct: 630 LALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKK-VIYPDYVTLCTLL 688

Query: 422 RGFIR 426
            G I+
Sbjct: 689 PGVIK 693



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 235/483 (48%), Gaps = 44/483 (9%)

Query: 3    RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            RV   + +  R+ +    P  VT+ +L+ GL  E R+ EA ALF  +    C P+  ++ 
Sbjct: 557  RVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFN 616

Query: 63   TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            TL++ LC+     +AL +   M   N      C P+ +TY T+I GL KE  V+ A  L 
Sbjct: 617  TLLDCLCKNGEVDLALKMLFRMTEMN------CFPDVLTYNTVIYGLIKENRVNYAFWLF 670

Query: 123  LQMKDKNIKPNVVTYTSVIRG----------FCYAKDW-----NEAKRLFIEMMDQGV-- 165
             QMK K I P+ VT  +++ G          F  AK++     + A   F E +  G+  
Sbjct: 671  HQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILI 729

Query: 166  ----------QPNVVTFNVIMDE---------LCKNGK-MDEASRLLDLMIQHGVRPDAF 205
                        ++V   +  D+         LCK+GK +D  +  L L     + P   
Sbjct: 730  EAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLE 789

Query: 206  TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
             YN+L+DG         A  LF  M++ GC   VF+Y++ ++   K+ +I+    LY EM
Sbjct: 790  AYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEM 849

Query: 266  LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            L +G KP+ + HN +  GL + + +++A  L+ ++     +   WTY   IDGL K G +
Sbjct: 850  LFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRL 909

Query: 326  VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             EA + F  +    C  +   YN L++G  K G +E A ELFR +    + P++ +YSIM
Sbjct: 910  EEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIM 969

Query: 386  IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
            +  LC  G++D A   F +++ + + P+++ ++++I G  R     + + L  +M+   +
Sbjct: 970  VDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGI 1029

Query: 446  MPD 448
             PD
Sbjct: 1030 TPD 1032



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 213/428 (49%), Gaps = 7/428 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  TFT  I+ L    +I EA  +  ++   GC PDV TYT L++ LC       A  L
Sbjct: 260 PNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKEL 319

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M   + +      P+ VTY T++D     G +D  KE   +M+     P+VVT+T +
Sbjct: 320 FLKMKASSHK------PDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTIL 373

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C     +EA      M  QGV PN+ T+N ++  L +  ++DEA  L + M   G+
Sbjct: 374 IDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGL 433

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
              A+TY   +D +  +G    A + F  M++ G    + + +  +    +   +E A  
Sbjct: 434 ETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKE 493

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            ++ +   G+ PD + +N L     +  +V+ A KL  EM+ NG   +     + ID L 
Sbjct: 494 FFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLY 553

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + EA ++F  ++ +K    +  YN+L+ GL K GR++ A  LF+ +      PN +
Sbjct: 554 KADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTI 613

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +++ ++  LC +G++D A  +   M E    P+V+T++ +I G I+ N  +    L H+M
Sbjct: 614 SFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673

Query: 441 KEINVMPD 448
           K++ + PD
Sbjct: 674 KKV-IYPD 680



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 230/463 (49%), Gaps = 15/463 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  + ++   P+ V   SLI  L    R+ EA  +F +++     P V TY
Sbjct: 521 GRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTY 580

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GL +      A  LF+ M   +      C PNT+++ T++D LCK G VD A ++
Sbjct: 581 NTLLAGLGKEGRVQEATALFKGMIADD------CPPNTISFNTLLDCLCKNGEVDLALKM 634

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M + N  P+V+TY +VI G       N A  LF   M + + P+ VT   ++  + K
Sbjct: 635 LFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLF-HQMKKVIYPDYVTLCTLLPGVIK 693

Query: 182 NGKMDEASRLLDLMIQH-GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +G++++A R+    + H G   D   +  L+ G  +   +  +    +  ES+ C     
Sbjct: 694 DGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQS---ILFAESLVCNTICE 750

Query: 241 SYSILI---NGYCKNKEIEGALSLYSEML-SKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             S+LI      CK+ +   A +++ ++  S  I P +  +N+L  GL +    E A+ L
Sbjct: 751 DDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGL 810

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F +M+  G   D +TY  F+D L K+G I E  +L+  +    C+ +   +N +I GL K
Sbjct: 811 FYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVK 870

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           S  L+ A++L+  L  G   P   TY  +I GL   G++++A+  F +M +   +PN   
Sbjct: 871 SNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +++L+ GF +  +     EL  +M +  + PD    SI+VD L
Sbjct: 931 YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCL 973



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 197/366 (53%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  +Y  +I  L K GF  +A ++  +M  + IKP++ TY++++      +D      L 
Sbjct: 191 NGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLL 250

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM   G++PN+ TF + +  L + GK+DEA  +L  M   G  PD  TY  L+D  C  
Sbjct: 251 QEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNA 310

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G++N+AKELF+ M++   K    +Y  L++ +  + +++     +SEM + G  PDVV  
Sbjct: 311 GKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTF 370

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             L   L ++ +V+ AF   D M++ GVA +  TY T I GL +   + EA+ELF+++  
Sbjct: 371 TILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMES 430

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
           L  E     Y   ID   KSG    A++ F  +    +VPN+V  +  +  L   G++++
Sbjct: 431 LGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEE 490

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A++ F  +++  + P+ IT+++L+R + +       I+LL +M+E    P+  I++ ++D
Sbjct: 491 AKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLID 550

Query: 458 LLAKNE 463
            L K +
Sbjct: 551 TLYKAD 556



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 229/472 (48%), Gaps = 36/472 (7%)

Query: 2    GRVSHGFVVLGRILK-SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            G V     +L R+ + +CF PD +T+ ++I GL  E+R+  A  LF +++     PD  T
Sbjct: 626  GEVDLALKMLFRMTEMNCF-PDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVT 683

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMAN-----GNGEF------------------------ 91
              TL+ G+ +      A  + +E  +      +G F                        
Sbjct: 684  LCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESL 743

Query: 92   --GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRGFCYAK 148
                +CE ++V    ++  LCK G    A  + L++ K   I P++  Y S+I G   A+
Sbjct: 744  VCNTICEDDSVL-IPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKAR 802

Query: 149  DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
                A  LF +M + G  P+V T+N+ +D L K+GK+ E   L + M+  G +P+  T+N
Sbjct: 803  LTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHN 862

Query: 209  TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
             ++ G   +  ++ A +L+  + S     T ++Y  LI+G  K   +E A   + EML  
Sbjct: 863  IVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDY 922

Query: 269  GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
            G  P+  ++N L  G  +   VE A +LF  M + G+  D  +Y   +D LC  G + +A
Sbjct: 923  GCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDA 982

Query: 329  VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            +  F  L++   + D+  YN +I+GL +S R+E AL LF  +    + P++ TY+ +I  
Sbjct: 983  LHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILN 1042

Query: 389  LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            L   G +++A  ++ +++   + PNV T++ LIRG      P +   +  KM
Sbjct: 1043 LGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 225/471 (47%), Gaps = 23/471 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V   F  L  + K    P+  T+ +LI GL   +R+ EA  LF  +   G E   +T
Sbjct: 380 VGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYT 439

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y   ++   ++  +  A+  FE+M       G+V  PN V     +  L ++G +++AKE
Sbjct: 440 YILFIDYYGKSGESGKAIKTFEKMKTN----GIV--PNIVACNASLYSLAEQGRLEEAKE 493

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               +K   + P+ +TY  ++R +  A   ++A +L  EM + G  P VV  N ++D L 
Sbjct: 494 FFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLY 553

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++DEA ++   M +  + P   TYNTLL G    GRV  A  LF  M +  C     
Sbjct: 554 KADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTI 613

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S++ L++  CKN E++ AL +   M      PDV+ +NT+  GL + ++V  AF LF +M
Sbjct: 614 SFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--------DIRAYNSLID 352
           ++  +  D  T  T + G+ K+G I +A       R+ K EF        D   +  L+ 
Sbjct: 674 KKV-IYPDYVTLCTLLPGVIKDGRIEDA------FRVAK-EFVHHVGDHADGSFWEDLMG 725

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AVV 411
           G+     +  ++    SL C  +  +      ++  LC  G+   A ++FL + ++  + 
Sbjct: 726 GILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCIT 785

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           P++  ++ LI G ++         L +KMK     PD    ++ +D L K+
Sbjct: 786 PSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKS 836



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 214/480 (44%), Gaps = 46/480 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V   + +  L  + R+ EA   F  L+  G  PD  TY  L+    +      A+ L
Sbjct: 470 PNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKL 529

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM   NG     C+P  V   ++ID L K   VD+A ++  +MK+  + P VVTY ++
Sbjct: 530 LSEMEE-NG-----CDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTL 583

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G        EA  LF  M+     PN ++FN ++D LCKNG++D A ++L  M +   
Sbjct: 584 LAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNC 643

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TYNT++ G     RVN+A  LF  M+ +     V +   L+ G  K+  IE A  
Sbjct: 644 FPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYV-TLCTLLPGVIKDGRIEDAFR 702

Query: 261 LYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDE-------------------- 299
           +  E +   G   D      L  G+    ++ ++  LF E                    
Sbjct: 703 VAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSI-LFAESLVCNTICEDDSVLIPLVKF 761

Query: 300 MQRNGVAADTW-----------------TYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
           + ++G A D +                  Y + IDGL K      A  LF+ ++   C  
Sbjct: 762 LCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTP 821

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D+  YN  +D L KSG+++   +L+  +      PN +T++I+I GL     +DKA DL+
Sbjct: 822 DVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLY 881

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            D+      P   T+  LI G +++    +  +   +M +   MP+  + +I+++   K 
Sbjct: 882 YDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQ 941



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 208/455 (45%), Gaps = 44/455 (9%)

Query: 3    RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEA-------------------- 42
            RV++ F +  + +K    PD VT  +L+ G+  + RI +A                    
Sbjct: 662  RVNYAFWLFHQ-MKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFW 720

Query: 43   ---------------AALFTKLRVFG--CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
                           + LF +  V    CE D      LV  LC+    + A N+F ++ 
Sbjct: 721  EDLMGGILIEAEIGQSILFAESLVCNTICEDDS-VLIPLVKFLCKHGKAVDAYNVFLKLT 779

Query: 86   NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                       P+   Y ++IDGL K    + A  L  +MK+    P+V TY   +    
Sbjct: 780  KS-----FCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALG 834

Query: 146  YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
             +    E   L+ EM+ +G +PN +T N+++  L K+  +D+A  L   ++     P  +
Sbjct: 835  KSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPW 894

Query: 206  TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            TY  L+DG    GR+  AK+ F  M   GC      Y+IL+NG+ K  ++E A  L+  M
Sbjct: 895  TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954

Query: 266  LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            + +GI+PD+  ++ +   L  + +V+ A   F+E++ +G+  D   Y   I+GL ++  +
Sbjct: 955  VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRV 1014

Query: 326  VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             EA+ LF  +R      D+  YN+LI  L  +G +E A +++  L    L PNV TY+ +
Sbjct: 1015 EEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNAL 1074

Query: 386  IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            I G    G  D+A  ++  M      PN  TF  L
Sbjct: 1075 IRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 153/317 (48%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F  M  Q ++ ++ T+  I   L   G + EA   L+ M + G   + ++Y  L+    
Sbjct: 144 VFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLL 203

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            +G    A +++  M S G K ++ +YS L+    K ++IE  + L  EM S G++P++ 
Sbjct: 204 KSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIY 263

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
                   L    +++ A+ +   M   G   D  TY   ID LC  G +  A ELF  +
Sbjct: 264 TFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKM 323

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +    + D   Y +L+D     G L+   E +  +     +P+VVT++I+I  LC  G++
Sbjct: 324 KASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKV 383

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           D+A      M++  V PN+ T++ LI G +R+N   + +EL + M+ + +   A    + 
Sbjct: 384 DEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILF 443

Query: 456 VDLLAKNEISLNSLPSF 472
           +D   K+  S  ++ +F
Sbjct: 444 IDYYGKSGESGKAIKTF 460



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 6/229 (2%)

Query: 19   FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            F+P   T+  LI GL    R+ EA   F ++  +GC P+   Y  L+NG  +      A 
Sbjct: 889  FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETAC 948

Query: 79   NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
             LF  M            P+  +Y+ ++D LC  G VD A     ++K   + P++V Y 
Sbjct: 949  ELFRRMVKEG------IRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYN 1002

Query: 139  SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
             +I G   ++   EA  LF EM ++G+ P++ T+N ++  L   G ++EA ++ + +   
Sbjct: 1003 LMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLK 1062

Query: 199  GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
            G+ P+ FTYN L+ G  ++G  + A  ++  M   GC+    +++ L N
Sbjct: 1063 GLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 94/171 (54%), Gaps = 6/171 (3%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G V     +  R++K    PD  +++ ++  LC   ++ +A   F +L++ G +PD+  Y
Sbjct: 942  GDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCY 1001

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              ++NGL R+     AL+LF+EM N     G+   P+  TY  +I  L   G V++A ++
Sbjct: 1002 NLMINGLGRSQRVEEALSLFDEMRNR----GIT--PDLYTYNALILNLGIAGMVEEAGKM 1055

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
              +++ K ++PNV TY ++IRG   + + + A  ++ +MM  G +PN  TF
Sbjct: 1056 YEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 6/210 (2%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +GR+         +L     P+   +  L+ G   +  +  A  LF ++   G  PD+ +
Sbjct: 906  LGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKS 965

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y+ +V+ LC       AL+ FEE+           +P+ V Y  +I+GL +   V++A  
Sbjct: 966  YSIMVDCLCMVGKVDDALHYFEELKLSG------LDPDLVCYNLMINGLGRSQRVEEALS 1019

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L  +M+++ I P++ TY ++I     A    EA +++ E+  +G++PNV T+N ++    
Sbjct: 1020 LFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHS 1079

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
             +G  D A  +   M+  G RP+  T+  L
Sbjct: 1080 MSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 111/229 (48%), Gaps = 1/229 (0%)

Query: 221 NHAKELFVSMESMG-CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           N A   F S+  M    HT  + + ++     ++ +E  + +++ M  + IK  +  + T
Sbjct: 103 NQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLT 162

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +F  L+    +  A    ++M++ G   + ++Y   I  L K+G+  EA++++  +    
Sbjct: 163 IFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEG 222

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            +  ++ Y++L+  L K   +E  + L + +    L PN+ T++I I  L   G++D+A 
Sbjct: 223 IKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAY 282

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +   M++    P+V+T+ +LI       + +   EL  KMK  +  PD
Sbjct: 283 GILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPD 331


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 212/382 (55%), Gaps = 6/382 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA T+ +LI+GLC   R   A A+  ++    C PDV TYT L+   C+ S    A+ L
Sbjct: 30  PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM +        C P+ VTY  +++G+C+EG VD A E L  +     +PN V+Y  V
Sbjct: 90  LDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 143

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G C A+ W +A+ L  EM  +G  PNVVTFN+++  LC+ G ++ A  +L+ + ++G 
Sbjct: 144 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 203

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P++ +YN LL  FC   +++ A      M S GC   + SY+ L+   C++ E++ A+ 
Sbjct: 204 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 263

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  ++  KG  P ++ +NT+  GL +  + + A +L +EM   G+  D  TY T   GLC
Sbjct: 264 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 323

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           +   I +A+  F  ++ +    +   YN++I GLCK      A++LF  +     +PN  
Sbjct: 324 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 383

Query: 381 TYSIMIGGLCNDGQMDKARDLF 402
           TY+I+I GL  +G + +ARDL 
Sbjct: 384 TYTILIEGLAYEGLIKEARDLL 405



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 209/401 (52%), Gaps = 9/401 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           + + +++ G C   ++  A  L  ++ V   EPD +TY TL+ GLC    T  AL + +E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M          C P+ VTYT +++  CK     +A +LL +M+DK   P++VTY  V+ G
Sbjct: 58  MLRRR------CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 111

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C     ++A      +   G +PN V++N+++  LC   + ++A  L+  M Q G  P+
Sbjct: 112 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 171

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             T+N L+   C  G V  A E+   +   GC     SY+ L++ +CK K+++ A++   
Sbjct: 172 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 231

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            M+S+G  PD+V +NTL   L    +V+ A +L  +++  G A    +Y T IDGL K G
Sbjct: 232 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 291

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
              EA+EL + +     + DI  Y+++  GLC+  R+E A+  F  +    + PN V Y+
Sbjct: 292 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 351

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            +I GLC   +   A DLF  M  N  +PN  T+ +LI G 
Sbjct: 352 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 392



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 197/369 (53%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR ++   VL  +L+    PD VT+T L++  C  S   +A  L  ++R  GC PD+ TY
Sbjct: 46  GRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTY 105

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +VNG+C+      A+   + + +    +G  CEPNTV+Y  ++ GLC     + A+EL
Sbjct: 106 NVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTVSYNIVLKGLCTAERWEDAEEL 159

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M  K   PNVVT+  +I   C       A  +  ++   G  PN +++N ++   CK
Sbjct: 160 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 219

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             KMD+A   LDLM+  G  PD  +YNTLL   C +G V+ A EL   ++  GC   + S
Sbjct: 220 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 279

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K  + + AL L +EM+SKG++PD++ ++T+  GL    ++E A + F ++Q
Sbjct: 280 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 339

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +T  Y   I GLCK      A++LF  +    C  +   Y  LI+GL   G ++
Sbjct: 340 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK 399

Query: 362 IALELFRSL 370
            A +L   L
Sbjct: 400 EARDLLDEL 408



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 207/402 (51%), Gaps = 9/402 (2%)

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
             Y  +V G C       A  L  EM           EP+  TY T+I GLC  G    A
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---------VEPDAYTYNTLIRGLCGRGRTANA 51

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             +L +M  +   P+VVTYT ++   C    + +A +L  EM D+G  P++VT+NV+++ 
Sbjct: 52  LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 111

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           +C+ G++D+A   L  +  +G  P+  +YN +L G C   R   A+EL   M   GC   
Sbjct: 112 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 171

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V ++++LI+  C+   +E AL +  ++   G  P+ + +N L     +  ++++A    D
Sbjct: 172 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 231

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M   G   D  +Y T +  LC++G +  AVEL H L+   C   + +YN++IDGL K+G
Sbjct: 232 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 291

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           + + ALEL   +    L P+++TYS +  GLC + +++ A   F  +++  + PN + ++
Sbjct: 292 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 351

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            +I G  +  E    I+L   M     MP+ S  +I+++ LA
Sbjct: 352 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 393



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 191/374 (51%), Gaps = 3/374 (0%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           + Y  ++ G C  G +D A+ L+ +M    ++P+  TY ++IRG C       A  +  E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+ +   P+VVT+ ++++  CK     +A +LLD M   G  PD  TYN +++G C  GR
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           V+ A E   ++ S GC+    SY+I++ G C  +  E A  L  EM  KG  P+VV  N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L     VE A ++ +++ + G   ++ +Y   +   CK   + +A+     +    
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C  DI +YN+L+  LC+SG +++A+EL   L      P +++Y+ +I GL   G+  +A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +L  +M    + P++IT+  +  G  R +     I    K++++ + P+  + + ++  L
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 460 AKNEISLNSLPSFT 473
            K   + +++  F 
Sbjct: 358 CKRRETHSAIDLFA 371



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++G + +    P+ VTF  LI  LC +  +  A  +  ++  +GC P+  +Y  L++  C
Sbjct: 159 LMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFC 218

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A+   + M +        C P+ V+Y T++  LC+ G VD A ELL Q+KDK 
Sbjct: 219 KQKKMDKAMAFLDLMVSRG------CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 272

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P +++Y +VI G   A    EA  L  EM+ +G+QP+++T++ I   LC+  ++++A 
Sbjct: 273 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 332

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           R    +   G+RP+   YN ++ G C     + A +LF  M   GC     +Y+ILI G 
Sbjct: 333 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 392

Query: 250 CKNKEIEGALSLYSEMLSKG 269
                I+ A  L  E+ S+ 
Sbjct: 393 AYEGLIKEARDLLDELCSRA 412



 Score = 45.1 bits (105), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 39/88 (44%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+       G++      P+ V + ++I GLC       A  LF  +   GC P+  TYT
Sbjct: 327 RIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYT 386

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGE 90
            L+ GL        A +L +E+ +  GE
Sbjct: 387 ILIEGLAYEGLIKEARDLLDELCSRAGE 414


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 230/440 (52%), Gaps = 6/440 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           +++  L++ L    R       +  +   GC P+ +TY  L+  LC+      A ++F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           MA         C PN  +Y+ +I GLC+   VD+A ELL +M D   +PNVVTY S++ G
Sbjct: 78  MAAQG------CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG 131

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C      EA  LF  M+ +G  P+ V +NV++D   K G M EA RL + M++ G  P 
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
            FTYN+LL GF   G     + LF  M   GC   +F+++ L++G+CK  ++  A  L+ 
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM S G  PDVV +NTL  G+    +   A +L  EM R+GV  D  +Y   IDG  K+G
Sbjct: 252 EMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            +  A++LF+ +     E D  +Y+++ID LC++G++  A  +F+ +      P+     
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVI 371

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            ++ GLC   ++ ++ +LF  M +   VP +  +++L+    +      V E+ H++ E 
Sbjct: 372 PLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTER 431

Query: 444 NVMPDASIVSIVVDLLAKNE 463
              PD  I  ++++ L +++
Sbjct: 432 GFSPDVEISKVILETLRRSD 451



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/413 (33%), Positives = 214/413 (51%), Gaps = 6/413 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR  H +     +L +   P+  T+  L++ LC   R  EA ++F  +   GC P+VF+Y
Sbjct: 31  GRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSY 90

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+ GLCR      A  L  EM +G        +PN VTY +++ GLCK G + +A +L
Sbjct: 91  SILIAGLCRGQKVDEAAELLNEMIDGGH------QPNVVTYGSLLSGLCKMGKLKEAVDL 144

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  +   P+ V Y  +I GF    D  EA RLF EM+++G  P V T+N ++    +
Sbjct: 145 FSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSR 204

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+      L   M++ G  P+ FT+N LLDGFC  G +  A  LF+ M S+GC   V S
Sbjct: 205 KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVS 264

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G C   +   A  L  EM+  G+ PD+V +N L  G  +   ++ A KLF E+ 
Sbjct: 265 YNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP 324

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++G+  D ++Y T ID LC+ G +  A  +F  +       D      L+ GLC+  RL 
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLT 384

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            + ELF+++     VP +  Y++++  LC   + D   ++F ++ E    P+V
Sbjct: 385 ESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 190/366 (51%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            T++Y  +++ L K G  D        M      PN  TY  ++R  C A+ + EA+ +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M  QG  PNV ++++++  LC+  K+DEA+ LL+ MI  G +P+  TY +LL G C  
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G++  A +LF  M   GC      Y++LI+G+ K  ++  A  L+ EML KG  P V  +
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N+L  G     +  R   LF +M R G   + +T+   +DG CK G +VEA  LF  +R 
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
           L C  D+ +YN+LI G+C  G+   A  L R +    + P++V+Y+I+I G    G +D 
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  LF ++ ++ + P+  ++  +I    R  +      +   M      PDA++V  +V 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375

Query: 458 LLAKNE 463
            L + E
Sbjct: 376 GLCRGE 381



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 162/319 (50%), Gaps = 6/319 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++     +  R++     PD V +  LI G   +  + EA  LF ++   GC P VFT
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G  R        +LF++M          C PN  T+  ++DG CK G + +A  
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQG------CVPNIFTFNNLLDGFCKMGDMVEAHR 248

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L+M+     P+VV+Y ++IRG C     +EA+RL  EM+  GV P++V++N+++D   
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYS 308

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G +D A +L   + + G+ PDAF+Y+T++D  C  G+V  A  +F  M + G      
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA 368

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
               L+ G C+ + +  +  L+  M+     P +  +N L   L +  + +   ++F E+
Sbjct: 369 VVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHEL 428

Query: 301 QRNGVAADTWTYRTFIDGL 319
              G + D    +  ++ L
Sbjct: 429 TERGFSPDVEISKVILETL 447



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 109/225 (48%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           H   SY+ L+    K+   +     Y++ML+ G  P+   +  L   L +  + E A  +
Sbjct: 15  HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F  M   G + + ++Y   I GLC+   + EA EL + +     + ++  Y SL+ GLCK
Sbjct: 75  FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G+L+ A++LF  +      P+ V Y+++I G    G M +A  LF +M E   +P V T
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++ L+ GF R  E  +V  L   M     +P+    + ++D   K
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 156/459 (33%), Positives = 238/459 (51%), Gaps = 15/459 (3%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G  +L  + +  + P   TFTS+I    A+  ++EA  L  ++   G   ++   T+L+ 
Sbjct: 274 GLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMK 333

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G C   +   ALNLF ++   +G F     PN VTY+ +I+G C  G ++KA EL  QMK
Sbjct: 334 GYCAQGNLDSALNLFNKITE-DGLF-----PNKVTYSVLIEGCCNSGNIEKASELYTQMK 387

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
              I P+V    S++RG+  A  W EA +LF E +D GV  N+ T+N++M  LCK GKMD
Sbjct: 388 LNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMD 446

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA  LLD M+  G+ P+  +YN ++ G C  G ++ A  +F  M +   K  V +YSILI
Sbjct: 447 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 506

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G  K  + E AL L+ +MLS  I P     NT+  GL ++ Q+  A          G  
Sbjct: 507 DGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFI 566

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF----DIRAYNSLIDGLCKSGRLEI 362
               TY + +DG  K G I  A+ ++  +    CEF    ++  Y SLI+G CKS R+++
Sbjct: 567 PSCMTYNSIVDGFIKEGNIDSALAVYREM----CEFGVSPNVVTYTSLINGFCKSNRIDL 622

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           AL+    +    L  +V  YS +I G C    M+ A+DLF ++ E  + PN I ++ +I 
Sbjct: 623 ALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 682

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           GF  +N     +    KM    +  D    + ++D L K
Sbjct: 683 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLK 721



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 260/505 (51%), Gaps = 43/505 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +  +I +    P+ VT++ LI+G C    I +A+ L+T++++ G  P VF  
Sbjct: 339 GNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 398

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ G  +      A  LF+E      + GV    N  TY  ++  LCK G +D+A  L
Sbjct: 399 NSLLRGYLKAPLWEEASKLFDEAV----DCGVA---NIFTYNIMMSWLCKGGKMDEACSL 451

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M ++ + PNVV+Y  +I G C   + + A  +F +M+ + ++PNVVT+++++D   K
Sbjct: 452 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 511

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G  ++A  L D M+   + P  FT+NT+++G C  G+++ A++   +    G   +  +
Sbjct: 512 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 571

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +++G+ K   I+ AL++Y EM   G+ P+VV + +L  G  + ++++ A K  DEM+
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL--------RIL--------------- 338
             G+  D   Y   IDG CK   +  A +LF  L        RI+               
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 691

Query: 339 ------------KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
                       +   D+  Y +LIDGL K GRL  A +L+  +    +VP+++T+ +++
Sbjct: 692 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 751

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLCN GQ++ AR +  +M+   + P+V+ ++ LI G+ R     +   L  +M +  ++
Sbjct: 752 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 811

Query: 447 PDASIVSIVVDLLAKNEISLNSLPS 471
           PD     I+++   K + SL S PS
Sbjct: 812 PDDVTYDILINGKFKGDRSL-SRPS 835



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 229/440 (52%), Gaps = 7/440 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T   +++    E R+ EA   F + +  G + D   Y+ ++  +C+  ++ + L L 
Sbjct: 219 DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELL 278

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM     E G V  P+  T+T++I     +G + +A  L  +M +     N+V  TS++
Sbjct: 279 EEMK----ERGWV--PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G+C   + + A  LF ++ + G+ PN VT++V+++  C +G +++AS L   M  +G+ 
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P  F  N+LL G+        A +LF      G  + +F+Y+I+++  CK  +++ A SL
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVAN-IFTYNIMMSWLCKGGKMDEACSL 451

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              M+++G+ P+VV +N + +G      ++ A  +F +M    +  +  TY   IDG  K
Sbjct: 452 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 511

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G   +A++LF  +  L        +N++I+GLCK G++  A +  ++      +P+ +T
Sbjct: 512 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 571

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ ++ G   +G +D A  ++ +M E  V PNV+T+  LI GF + N     ++   +M+
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631

Query: 442 EINVMPDASIVSIVVDLLAK 461
           E  +  D +  S ++D   K
Sbjct: 632 EKGLELDVTAYSALIDGFCK 651



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 214/455 (47%), Gaps = 8/455 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+  L   + I E   L+ K+ + G   D FT   +V    +      A   F E     
Sbjct: 191 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETK--- 247

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
            E GV  +     Y+ II  +CK+   +   ELL +MK++   P+  T+TSVI       
Sbjct: 248 -ERGVKLDAGA--YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 304

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
           +  EA RL  EM++ G   N+V    +M   C  G +D A  L + + + G+ P+  TY+
Sbjct: 305 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 364

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L++G C +G +  A EL+  M+  G   +VF+ + L+ GY K    E A  L+ E +  
Sbjct: 365 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC 424

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G+  ++  +N +   L +  +++ A  L D M   G+  +  +Y   I G C+ G +  A
Sbjct: 425 GVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMA 483

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
             +F  +     + ++  Y+ LIDG  K G  E AL+LF  +    + P   T++ +I G
Sbjct: 484 SSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIING 543

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC  GQM +ARD   +  E   +P+ +T++ ++ GFI+       + +  +M E  V P+
Sbjct: 544 LCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPN 603

Query: 449 -ASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
             +  S++      N I L       + E+  E+D
Sbjct: 604 VVTYTSLINGFCKSNRIDLALKTRDEMREKGLELD 638



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 154/286 (53%), Gaps = 6/286 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++S     L   L+  F P  +T+ S++ G   E  I  A A++ ++  FG  P+V T
Sbjct: 547 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVT 606

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT+L+NG C+++   +AL   +EM     E  V        Y+ +IDG CK   ++ A++
Sbjct: 607 YTSLINGFCKSNRIDLALKTRDEMREKGLELDV------TAYSALIDGFCKRRDMESAQD 660

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++ +  + PN + Y S+I GF    +   A   + +M++  +  ++ T+  ++D L 
Sbjct: 661 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 720

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++  AS L   M+  G+ PD  T++ L++G C  G++ +A+++   M+      +V 
Sbjct: 721 KEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVL 780

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
            Y+ LI GY +   ++ A +L+ EML +G+ PD V ++ L  G F+
Sbjct: 781 IYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 826



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 163/394 (41%), Gaps = 69/394 (17%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           +  ++  +  A     A   F  M+ Q V P V   N+++  L +   + E   L + M+
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+  D FT + ++      GRV  A+E F   +  G K    +YSI+I   CK     
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 272

Query: 257 GALSLYSEMLSKGIKP-----------------------------------DVVIHNTLF 281
             L L  EM  +G  P                                   ++V+  +L 
Sbjct: 273 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI---- 337
            G      ++ A  LF+++  +G+  +  TY   I+G C +G I +A EL+  +++    
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392

Query: 338 -------------LKCEF-----------------DIRAYNSLIDGLCKSGRLEIALELF 367
                        LK                    +I  YN ++  LCK G+++ A  L 
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLL 452

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            ++    +VPNVV+Y+ MI G C  G MD A  +F DM    + PNV+T+ +LI G  + 
Sbjct: 453 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 512

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +  K ++L  +M  +N+ P     + +++ L K
Sbjct: 513 GDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK 546



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 58/344 (16%)

Query: 144 FCYAKDWNEAKRLFIEMMDQ-----GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            C+  D   A R F     Q     GV    V  +++M     +G    A +LL+  +  
Sbjct: 68  LCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHG---HARKLLNRYVSG 124

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
              P    +   L        +N AK     ++     H VF+Y  L+N Y +   IE A
Sbjct: 125 DSDPSPVVFVDHL--------INCAKRFDFELD-----HRVFNY--LLNAYIRANRIENA 169

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           +  ++ M+ + + P V   N L   L   + +     L+++M   G+  D +T    +  
Sbjct: 170 IDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRA 229

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP- 377
             K G + EA E F   +    + D  AY+ +I  +CK     + LEL   +     VP 
Sbjct: 230 CLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPS 289

Query: 378 ----------------------------------NVVTYSIMIGGLCNDGQMDKARDLFL 403
                                             N+V  + ++ G C  G +D A +LF 
Sbjct: 290 EATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFN 349

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            + E+ + PN +T+ +LI G        K  EL  +MK   + P
Sbjct: 350 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 393



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 67/147 (45%)

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
           ++ G      +V    L +  +    E D R +N L++   ++ R+E A++ F ++ C  
Sbjct: 121 YVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQD 180

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           ++P V   +I++  L     + + RDL+  M    +  +  T  +++R  ++     +  
Sbjct: 181 VIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAE 240

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
           E   + KE  V  DA   SI++  + K
Sbjct: 241 EYFRETKERGVKLDAGAYSIIIQAVCK 267


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/413 (33%), Positives = 217/413 (52%), Gaps = 5/413 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C T D+     ++  +C +  + E   L  KL  FGCEPD+ +Y  ++ GLC      
Sbjct: 172 KGC-TLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWD 230

Query: 76  VALNLFEEMANGNGEFGVV----CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
               L  EM   +     +    C P+   Y TIIDG+CK+G  + A ++L +M    +K
Sbjct: 231 DVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLK 290

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           PNVV Y +V++G C A+ W EA+ L  EM  +    + VTFN+++D  C+NG +D    L
Sbjct: 291 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIEL 350

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L+ M++HG  PD  TY T+++GFC  G V+ A  L  +M + GCK    SY+I++ G C+
Sbjct: 351 LEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCR 410

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            +    A  L S M+ +G  P+ V  NTL   + +    E+A +L  +M  NG + D  +
Sbjct: 411 AERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLIS 470

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T IDGL K G   EA+EL + +       +   Y+S+   L + GR +  +++F S+ 
Sbjct: 471 YSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQ 530

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
              +  +   Y+ +I  LC   + D+A D F  M  N  +PN  T+ +LIRG 
Sbjct: 531 DATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 583



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 224/452 (49%), Gaps = 18/452 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T+  +++ LCA   I +A  +  ++ + GC         ++   CR      A+  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            + + A G       C  ++     ++  +C++G VD+  ELL ++     +P++V+Y +
Sbjct: 166 LQVLHAKG-------CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNA 218

Query: 140 VIRGFCYAKDWNEAKRLFIEMM----------DQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           V++G C AK W++ + L +EM+          + G  P++  +  I+D +CK+G  + A+
Sbjct: 219 VLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAN 278

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +L  M  +G++P+   YNT+L G C   R   A++L   M    C     +++IL++ +
Sbjct: 279 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 338

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+N  ++  + L  +ML  G  PDV+ + T+  G  +   V+ A  L   M   G   +T
Sbjct: 339 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT 398

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            +Y   + GLC+    V+A EL   +    C  +   +N+LI+ +CK G  E A+EL + 
Sbjct: 399 ISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQ 458

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +      P++++YS +I GL   G+ ++A +L   M    + PN I +  +     R   
Sbjct: 459 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 518

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             K+I++   +++  V  DA++ + V+  L K
Sbjct: 519 TDKIIQMFDSIQDATVRSDAALYNAVISSLCK 550



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 211/414 (50%), Gaps = 16/414 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL----------FTKLRV 51
           G V  G  +L ++      PD V++ +++KGLC   R  +   L           +++  
Sbjct: 192 GCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPE 251

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
            GC PD+  Y T+++G+C+  H  VA ++   M +    +G+  +PN V Y T++ GLC 
Sbjct: 252 HGCTPDLRMYATIIDGICKDGHHEVANDILSRMPS----YGL--KPNVVCYNTVLKGLCS 305

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
               ++A++LL +M  ++   + VT+  ++  FC     +    L  +M++ G  P+V+T
Sbjct: 306 AERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVIT 365

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  +++  CK G +DEA  LL  M   G +P+  +Y  +L G C   R   A+EL   M 
Sbjct: 366 YTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI 425

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             GC     +++ LIN  CK    E A+ L  +ML  G  PD++ ++T+  GL +  + E
Sbjct: 426 QQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 485

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +L + M   G+  +T  Y +    L + G   + +++F +++      D   YN++I
Sbjct: 486 EALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVI 545

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
             LCK    + A++ F  +     +PN  TY+I+I GL ++G + +A+DL  ++
Sbjct: 546 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 140/277 (50%), Gaps = 7/277 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L ++L+    PD +T+T++I G C E  + EA  L   +   GC+P+  +Y
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 401

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++ GLCR    + A  L   M          C PN VT+ T+I+ +CK+G  ++A EL
Sbjct: 402 TIVLKGLCRAERWVDAQELISHMIQQG------CLPNPVTFNTLINFMCKKGLAEQAIEL 455

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM      P++++Y++VI G   A    EA  L   M+++G+ PN + ++ +   L +
Sbjct: 456 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSR 515

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ D+  ++ D +    VR DA  YN ++   C     + A + F  M S GC     +
Sbjct: 516 EGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 575

Query: 242 YSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIH 277
           Y+ILI G      +  A  L SE+ S + ++  +V H
Sbjct: 576 YTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRH 612



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 184/450 (40%), Gaps = 57/450 (12%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
            ++LI+ LCA  R  +AA     L   G    V  Y  ++ G CR      A  L     
Sbjct: 47  LSALIRSLCAAGRTADAA---RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAA-- 101

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                  V   PN  TY  I+  LC  G +  A  +L +M  +           ++   C
Sbjct: 102 -------VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAAC 154

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
               +  A R    +  +G   +    N+++  +C+ G +DE   LL  +   G  PD  
Sbjct: 155 RGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIV 214

Query: 206 TYNTLLDGFCLTGRVNHAKELFV----------SMESMGCKHTVFSYSILINGYCKNKEI 255
           +YN +L G C+  R +  +EL V           M   GC   +  Y+ +I+G CK+   
Sbjct: 215 SYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 274

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E A  + S M S G+KP+VV +N                                   T 
Sbjct: 275 EVANDILSRMPSYGLKPNVVCYN-----------------------------------TV 299

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           + GLC      EA +L   +    C  D   +N L+D  C++G ++  +EL   +     
Sbjct: 300 LKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 359

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           +P+V+TY+ +I G C +G +D+A  L  +M      PN I++ ++++G  R        E
Sbjct: 360 IPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQE 419

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           L+  M +   +P+    + +++ + K  ++
Sbjct: 420 LISHMIQQGCLPNPVTFNTLINFMCKKGLA 449


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 156/459 (33%), Positives = 238/459 (51%), Gaps = 15/459 (3%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G  +L  + +  + P   TFTS+I    A+  ++EA  L  ++   G   ++   T+L+ 
Sbjct: 314 GLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMK 373

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G C   +   ALNLF ++   +G F     PN VTY+ +I+G C  G ++KA EL  QMK
Sbjct: 374 GYCAQGNLDSALNLFNKITE-DGLF-----PNKVTYSVLIEGCCNSGNIEKASELYTQMK 427

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
              I P+V    S++RG+  A  W EA +LF E +D GV  N+ T+N++M  LCK GKMD
Sbjct: 428 LNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMD 486

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA  LLD M+  G+ P+  +YN ++ G C  G ++ A  +F  M +   K  V +YSILI
Sbjct: 487 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 546

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G  K  + E AL L+ +MLS  I P     NT+  GL ++ Q+  A          G  
Sbjct: 547 DGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFI 606

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF----DIRAYNSLIDGLCKSGRLEI 362
               TY + +DG  K G I  A+ ++  +    CEF    ++  Y SLI+G CKS R+++
Sbjct: 607 PSCMTYNSIVDGFIKEGNIDSALAVYREM----CEFGVSPNVVTYTSLINGFCKSNRIDL 662

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           AL+    +    L  +V  YS +I G C    M+ A+DLF ++ E  + PN I ++ +I 
Sbjct: 663 ALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 722

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           GF  +N     +    KM    +  D    + ++D L K
Sbjct: 723 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLK 761



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 260/505 (51%), Gaps = 43/505 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +  +I +    P+ VT++ LI+G C    I +A+ L+T++++ G  P VF  
Sbjct: 379 GNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 438

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ G  +      A  LF+E      + GV    N  TY  ++  LCK G +D+A  L
Sbjct: 439 NSLLRGYLKAPLWEEASKLFDEAV----DCGVA---NIFTYNIMMSWLCKGGKMDEACSL 491

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M ++ + PNVV+Y  +I G C   + + A  +F +M+ + ++PNVVT+++++D   K
Sbjct: 492 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 551

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G  ++A  L D M+   + P  FT+NT+++G C  G+++ A++   +    G   +  +
Sbjct: 552 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 611

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +++G+ K   I+ AL++Y EM   G+ P+VV + +L  G  + ++++ A K  DEM+
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL--------RIL--------------- 338
             G+  D   Y   IDG CK   +  A +LF  L        RI+               
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 731

Query: 339 ------------KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
                       +   D+  Y +LIDGL K GRL  A +L+  +    +VP+++T+ +++
Sbjct: 732 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLCN GQ++ AR +  +M+   + P+V+ ++ LI G+ R     +   L  +M +  ++
Sbjct: 792 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 851

Query: 447 PDASIVSIVVDLLAKNEISLNSLPS 471
           PD     I+++   K + SL S PS
Sbjct: 852 PDDVTYDILINGKFKGDRSL-SRPS 875



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 229/440 (52%), Gaps = 7/440 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T   +++    E R+ EA   F + +  G + D   Y+ ++  +C+  ++ + L L 
Sbjct: 259 DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELL 318

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM     E G V  P+  T+T++I     +G + +A  L  +M +     N+V  TS++
Sbjct: 319 EEMK----ERGWV--PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G+C   + + A  LF ++ + G+ PN VT++V+++  C +G +++AS L   M  +G+ 
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P  F  N+LL G+        A +LF      G  + +F+Y+I+++  CK  +++ A SL
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVAN-IFTYNIMMSWLCKGGKMDEACSL 491

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              M+++G+ P+VV +N + +G      ++ A  +F +M    +  +  TY   IDG  K
Sbjct: 492 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 551

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G   +A++LF  +  L        +N++I+GLCK G++  A +  ++      +P+ +T
Sbjct: 552 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 611

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ ++ G   +G +D A  ++ +M E  V PNV+T+  LI GF + N     ++   +M+
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671

Query: 442 EINVMPDASIVSIVVDLLAK 461
           E  +  D +  S ++D   K
Sbjct: 672 EKGLELDVTAYSALIDGFCK 691



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 214/455 (47%), Gaps = 8/455 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+  L   + I E   L+ K+ + G   D FT   +V    +      A   F E     
Sbjct: 231 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETK--- 287

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
            E GV  +     Y+ II  +CK+   +   ELL +MK++   P+  T+TSVI       
Sbjct: 288 -ERGVKLDAGA--YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 344

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
           +  EA RL  EM++ G   N+V    +M   C  G +D A  L + + + G+ P+  TY+
Sbjct: 345 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 404

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L++G C +G +  A EL+  M+  G   +VF+ + L+ GY K    E A  L+ E +  
Sbjct: 405 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC 464

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G+  ++  +N +   L +  +++ A  L D M   G+  +  +Y   I G C+ G +  A
Sbjct: 465 GVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMA 523

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
             +F  +     + ++  Y+ LIDG  K G  E AL+LF  +    + P   T++ +I G
Sbjct: 524 SSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIING 583

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC  GQM +ARD   +  E   +P+ +T++ ++ GFI+       + +  +M E  V P+
Sbjct: 584 LCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPN 643

Query: 449 -ASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
             +  S++      N I L       + E+  E+D
Sbjct: 644 VVTYTSLINGFCKSNRIDLALKTRDEMREKGLELD 678



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 154/286 (53%), Gaps = 6/286 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++S     L   L+  F P  +T+ S++ G   E  I  A A++ ++  FG  P+V T
Sbjct: 587 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVT 646

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT+L+NG C+++   +AL   +EM     E  V        Y+ +IDG CK   ++ A++
Sbjct: 647 YTSLINGFCKSNRIDLALKTRDEMREKGLELDV------TAYSALIDGFCKRRDMESAQD 700

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++ +  + PN + Y S+I GF    +   A   + +M++  +  ++ T+  ++D L 
Sbjct: 701 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 760

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++  AS L   M+  G+ PD  T++ L++G C  G++ +A+++   M+      +V 
Sbjct: 761 KEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVL 820

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
            Y+ LI GY +   ++ A +L+ EML +G+ PD V ++ L  G F+
Sbjct: 821 IYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 866



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 163/394 (41%), Gaps = 69/394 (17%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           +  ++  +  A     A   F  M+ Q V P V   N+++  L +   + E   L + M+
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+  D FT + ++      GRV  A+E F   +  G K    +YSI+I   CK     
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312

Query: 257 GALSLYSEMLSKGIKP-----------------------------------DVVIHNTLF 281
             L L  EM  +G  P                                   ++V+  +L 
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI---- 337
            G      ++ A  LF+++  +G+  +  TY   I+G C +G I +A EL+  +++    
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432

Query: 338 -------------LKCEF-----------------DIRAYNSLIDGLCKSGRLEIALELF 367
                        LK                    +I  YN ++  LCK G+++ A  L 
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLL 492

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            ++    +VPNVV+Y+ MI G C  G MD A  +F DM    + PNV+T+ +LI G  + 
Sbjct: 493 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 552

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +  K ++L  +M  +N+ P     + +++ L K
Sbjct: 553 GDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK 586



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 133/346 (38%), Gaps = 59/346 (17%)

Query: 144 FCYAKDWNEAKRLFIEMMDQ-----GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            C+  D   A R F     Q     GV    V  +++M     +G    A +LL+  +  
Sbjct: 108 LCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHG---HARKLLNRYVSG 164

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
              P    +   L        +N AK     ++     H VF+Y  L+N Y +   IE A
Sbjct: 165 DSDPSPVVFVDHL--------INCAKRFDFELD-----HRVFNY--LLNAYIRANRIENA 209

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           +  ++ M+ + + P V   N L   L   + +     L+++M   G+  D +T    +  
Sbjct: 210 IDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRA 269

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP- 377
             K G + EA E F   +    + D  AY+ +I  +CK     + LEL   +     VP 
Sbjct: 270 CLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPS 329

Query: 378 ----------------------------------NVVTYSIMIGGLCNDGQMDKARDLFL 403
                                             N+V  + ++ G C  G +D A +LF 
Sbjct: 330 EATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFN 389

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
            + E+ + PN +T+ +LI G        K  EL  +MK +N +P +
Sbjct: 390 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMK-LNGIPPS 434



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 67/147 (45%)

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
           ++ G      +V    L +  +    E D R +N L++   ++ R+E A++ F ++ C  
Sbjct: 161 YVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQD 220

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           ++P V   +I++  L     + + RDL+  M    +  +  T  +++R  ++     +  
Sbjct: 221 VIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAE 280

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
           E   + KE  V  DA   SI++  + K
Sbjct: 281 EYFRETKERGVKLDAGAYSIIIQAVCK 307


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 229/433 (52%), Gaps = 7/433 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT++ LI   C    +  A + F ++   G    ++ Y +L+NG C+      A  L+ +
Sbjct: 394 VTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTK 453

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M N         EP   T+TT+I G CK+  V+KA +L  +M +K I P+V T+T++I G
Sbjct: 454 MINEG------LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYG 507

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C   +  EA +LF EM+++ ++P  VT+NV+++  CK   MD+A  LL+ M+ +G+ PD
Sbjct: 508 LCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPD 567

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
            +TY  L+ G C TGRV+ AK+    +     K     YS L++GYC    +  ALS   
Sbjct: 568 TYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASC 627

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM+ +GI  D+V H  L  G  +   ++R F L  +M   G+  D+  Y + ID   K G
Sbjct: 628 EMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEG 687

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
              ++ E    +   KC  ++  Y + ++GLCK G ++ A  LF  +    + PN VTY 
Sbjct: 688 SFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYG 747

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
             +  L  +G M +A DL  +M +  ++ N  T+++LIRGF ++    +  ++L +M E 
Sbjct: 748 CFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTEN 806

Query: 444 NVMPDASIVSIVV 456
            + PD    S ++
Sbjct: 807 GIFPDCITYSTII 819



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 224/443 (50%), Gaps = 6/443 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F    VT+  LI GLC    ++EA  +   LR  G + DV TY TLV G CR       +
Sbjct: 249 FDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGI 308

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L  EM     E G V  P     + ++DGL K+G +D A +L++++      PN+  Y 
Sbjct: 309 CLMNEMV----ELGFV--PTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYN 362

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I   C  +D ++A+ L+  M    +  N VT+++++D  CK G +D A      MI+ 
Sbjct: 363 ALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIED 422

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+R   + YN+L++G C  G ++ A+ L+  M + G + T  +++ LI+GYCK+ ++E A
Sbjct: 423 GIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKA 482

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             LY EM  K I P V     L  GL   +++  A KLFDEM    +     TY   I+G
Sbjct: 483 FKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEG 542

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK   + +A EL   +       D   Y  LI GLC +GR+  A +    L    L  N
Sbjct: 543 YCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLN 602

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            + YS ++ G C  G++ +A     +M +  +  +++   +LI G ++  +  ++  LL 
Sbjct: 603 EMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLK 662

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
           KM +  + PD+ I + ++D  +K
Sbjct: 663 KMYDQGLRPDSVIYTSMIDAYSK 685



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 220/457 (48%), Gaps = 41/457 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV    VVL  +L +   P+  T ++++ GL    + +    +F +    G +PD +T +
Sbjct: 163 RVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCS 222

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++  LC       A      M +   +  +V      TY  +I GLCK G V +A E+ 
Sbjct: 223 AVIRSLCELKDFCRAKEKILWMESNRFDLSIV------TYNVLIHGLCKGGGVLEALEVR 276

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV----------------- 165
             +++K +K +VVTY +++ GFC  + +++   L  EM++ G                  
Sbjct: 277 KSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKK 336

Query: 166 ------------------QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                              PN+  +N +++ LCK   +D+A  L   M    +  +  TY
Sbjct: 337 GNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTY 396

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           + L+D FC  G ++ A+  F  M   G + T++ Y+ LING+CK  ++  A  LY++M++
Sbjct: 397 SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMIN 456

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G++P      TL  G  +  QVE+AFKL+ EM    +A   +T+   I GLC    + E
Sbjct: 457 EGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A +LF  +   K +     YN +I+G CK+  ++ A EL   +    LVP+  TY  +I 
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           GLC+ G++  A+D   D+ +  +  N + +  L+ G+
Sbjct: 577 GLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGY 613



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 211/430 (49%), Gaps = 16/430 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P   TFT+LI GLC+ + + EA+ LF ++     +P   TY  ++ G C+  +   A  
Sbjct: 495 APSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFE 554

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L E+M +     G+V  P+T TY  +I GLC  G V  AK+ +  +  KN+K N + Y++
Sbjct: 555 LLEDMLHN----GLV--PDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSA 608

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G+C      EA     EM+ +G+  ++V   V++D   K   M     LL  M   G
Sbjct: 609 LLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQG 668

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           +RPD+  Y +++D +   G    + E    M +  C   V +Y+  +NG CK  EI+ A 
Sbjct: 669 LRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAG 728

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+ +ML+  I P+ V +      L +   ++ A  L  EM + G+ A+T TY   I G 
Sbjct: 729 HLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGF 787

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G ++EA ++   +       D   Y+++I   C+SG +  A+EL+ ++    + P+ 
Sbjct: 788 CKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDS 847

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI---------TFDMLIRGFIRINEP 430
           V ++++I G C +G +DKA +L  DM    + P  I           + L+ G     E 
Sbjct: 848 VAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEV 907

Query: 431 SKVIELLHKM 440
              + L H M
Sbjct: 908 DTALRLYHSM 917



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 153/320 (47%), Gaps = 18/320 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++        +++     D V    LI G   +  +     L  K+   G  PD   Y
Sbjct: 617 GRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIY 676

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T++++   +      +    + M          C PN VTYT  ++GLCK G +D+A  L
Sbjct: 677 TSMIDAYSKEGSFKKSGECLDLMVTEK------CFPNVVTYTAFMNGLCKVGEIDRAGHL 730

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M   NI PN VTY   +       +  EA  L  EM+ +G+  N  T+N+++   CK
Sbjct: 731 FEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCK 789

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA+++L  M ++G+ PD  TY+T++   C +G V  A EL+ +M   G +    +
Sbjct: 790 LGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVA 849

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKP---------DVVIHNTLFVGLFEIHQVER 292
           +++LI G C N  ++ A  L ++MLS+G+KP         D+ + N L  G     +V+ 
Sbjct: 850 FNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDT 909

Query: 293 AFKLFDEMQRNGV--AADTW 310
           A +L+  M    V  + + W
Sbjct: 910 ALRLYHSMLTRAVKLSLEMW 929



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 161/361 (44%), Gaps = 35/361 (9%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN----------------------- 168
           P V T ++++ G    + +     +F E ++ GV+P+                       
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEK 240

Query: 169 ------------VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
                       +VT+NV++  LCK G + EA  +   + + G++ D  TY TL+ GFC 
Sbjct: 241 ILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCR 300

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             + +    L   M  +G   T  + S L++G  K   I+ A  L  ++   G  P++ +
Sbjct: 301 VQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFV 360

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L   L +   +++A  L+  M    +  +  TY   ID  CK G +  A   F  + 
Sbjct: 361 YNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMI 420

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                  I  YNSLI+G CK G L  A  L+  +    L P   T++ +I G C D Q++
Sbjct: 421 EDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVE 480

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  L+ +M E  + P+V TF  LI G    NE ++  +L  +M E  + P     ++++
Sbjct: 481 KAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMI 540

Query: 457 D 457
           +
Sbjct: 541 E 541



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 18/303 (5%)

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + + +     +F +++  L +N     A+ LL  ++  G  P  F +   L+        
Sbjct: 88  LHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDP-KFVFEKFLE-------- 138

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           +H +  F S            +  L++ Y +N  +  A+ +   ML   + P+V   + +
Sbjct: 139 SHKQCKFSS---------TLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAI 189

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL  I +    +++FDE    GV  D +T    I  LC+      A E    +   + 
Sbjct: 190 LNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRF 249

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           +  I  YN LI GLCK G +  ALE+ +SL    L  +VVTY  ++ G C   Q D    
Sbjct: 250 DLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGIC 309

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L  +M E   VP       L+ G  +        +L+ K+     +P+  + + +++ L 
Sbjct: 310 LMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALC 369

Query: 461 KNE 463
           K E
Sbjct: 370 KGE 372



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 2/224 (0%)

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V + S ++NG  + ++      ++ E ++ G+KPD    + +   L E+    RA +   
Sbjct: 183 VRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKIL 242

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M+ N       TY   I GLCK G ++EA+E+  +LR    + D+  Y +L+ G C+  
Sbjct: 243 WMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQ 302

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           + +  + L   +     VP     S ++ GL   G +D A DL + +     +PN+  ++
Sbjct: 303 QFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYN 362

Query: 419 MLIRGFIRINEPSKVIELLHK-MKEINVMPDASIVSIVVDLLAK 461
            LI    +  +  K  ELL+K M  +N+  +    SI++D   K
Sbjct: 363 ALINALCKGEDLDKA-ELLYKNMHSMNLPLNDVTYSILIDSFCK 405



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 12/298 (4%)

Query: 133 NVVTYTSVIRG----FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N + +T ++RG    F + K        F+E   Q    + + F+ ++    +N ++ +A
Sbjct: 116 NSLLHTLLLRGSDPKFVFEK--------FLESHKQCKFSSTLGFDFLVHSYLQNTRVFDA 167

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             +L LM+ + + P+  T + +L+G     +     E+F    + G K   ++ S +I  
Sbjct: 168 VVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRS 227

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C+ K+   A      M S      +V +N L  GL +   V  A ++   ++  G+  D
Sbjct: 228 LCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKED 287

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY T + G C+     + + L + +  L       A + L+DGL K G ++ A +L  
Sbjct: 288 VVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVV 347

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            L     +PN+  Y+ +I  LC    +DKA  L+ +M    +  N +T+ +LI  F +
Sbjct: 348 KLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCK 405


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 240/455 (52%), Gaps = 6/455 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  +    V  R++     P   T+++L+  L       +   L  +++  G  P+++TY
Sbjct: 214 GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTY 273

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T  +  L R      A  +F+EM +        C P+ +TYT +ID LC  G +DKAKEL
Sbjct: 274 TICIRALGRARRIDDAWGIFKEMDDEG------CGPDVITYTVLIDALCAAGKLDKAKEL 327

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            ++M+  +  P+ VTY +++  F    D    KR + EM   G  P+VVT+ ++++ LCK
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G +D A  +LD+M   G+ P+  TYNT++ G     R++ A EL  +MES+G K T FS
Sbjct: 388 SGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFS 447

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y + I+ Y K+ +   A+  +  M  +GI P +   N     L E  ++  A  +F+++ 
Sbjct: 448 YVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLH 507

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G++ D+ TY   +    K G I +A +L   +    CE D+   NSLI+ L K+GR++
Sbjct: 508 KCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVD 567

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++F  L    L P VVTY+I++ GL  +G++ KA +LF  M E+   PN ITF+ L+
Sbjct: 568 AAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLL 627

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
               + +     +++  +M  +N  PD    + ++
Sbjct: 628 DCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII 662



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 228/424 (53%), Gaps = 13/424 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T+T LI  LCA  ++ +A  L+ K+R     PD  TY TL++   +          
Sbjct: 303 PDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRF 362

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + EM  +G         P+ VTYT +I+ LCK G VD+A ++L  M  K I PN+ TY +
Sbjct: 363 WNEMEVDGYA-------PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNT 415

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G   A+  +EA  L   M   GV+P   ++ + +D   K+G   +A    + M + G
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P     N  L     TGR++ A+++F  +   G      +Y++L+  Y K  +I+ A 
Sbjct: 476 IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKAT 535

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L SEM+SKG +PDV+I N+L   L++  +V+ A+K+F  ++   +A    TY   + GL
Sbjct: 536 QLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGL 595

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K G I++A+ELF ++    C  +   +NSL+D L K+  +++AL++F  +      P+V
Sbjct: 596 GKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDV 655

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVI-E 435
           +TY+ +I GL  +G++D A   F  M++  + P+ +T   LI G +   R+ +  KV+ E
Sbjct: 656 LTYNTIIYGLIREGRIDYAFWFFHQMKK-FLSPDYVTLCTLIPGVVRHGRVEDAIKVVME 714

Query: 436 LLHK 439
            +H+
Sbjct: 715 FVHQ 718



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 230/475 (48%), Gaps = 17/475 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     V   + K     +  T+ ++ K L  +  I  A     K+   G   + ++Y 
Sbjct: 146 RIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYN 205

Query: 63  TLVN----GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            L++    G C       AL +++ M +         +P+  TY+ ++  L + G   K 
Sbjct: 206 GLIHLLLPGFCNE-----ALKVYKRMISEG------MKPSMKTYSALMVALGRRGDTRKI 254

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             LL +MK   ++PN+ TYT  IR    A+  ++A  +F EM D+G  P+V+T+ V++D 
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDA 314

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LC  GK+D+A  L   M      PD  TY TL+D F   G +   K  +  ME  G    
Sbjct: 315 LCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +Y+ILI   CK+ +++ A  +   M +KGI P++  +NT+  GL +  +++ A +L +
Sbjct: 375 VVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLE 434

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M+  GV    ++Y  FID   K+G   +A++ F T++       I A N+ +  L ++G
Sbjct: 435 NMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETG 494

Query: 359 RLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           R+  A ++F  L  CG L P+ VTY++++      GQ+DKA  L  +M      P+V+  
Sbjct: 495 RISEAEDIFNDLHKCG-LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMII 553

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           + LI    +        ++  ++K + + P     +I++  L K    L +L  F
Sbjct: 554 NSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELF 608



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 208/426 (48%), Gaps = 6/426 (1%)

Query: 2    GRVSHGF-VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            GRV     VV+  + ++C   ++  +  L++ +  E+ I EA +    L       D   
Sbjct: 703  GRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHV 762

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
               L+  LC+    + A N+F++     G       P   +Y  ++DGL    F +KA E
Sbjct: 763  MLPLIKVLCKRKKALDAQNVFDKFTKNLG-----IHPTLESYNCLMDGLLGSNFTEKALE 817

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L   MK     PN  TY  ++     +K  N+   L+ EM  +G +PN +T N+I+  L 
Sbjct: 818  LFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALV 877

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            K+  +++A  L   ++     P   TY  L+DG    GR   A ++F  M   GC     
Sbjct: 878  KSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSV 937

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
             Y+ILING+ K+ EI+ A  L+ +M+ +GI+PD+  +  L   L    +++ A + F+E+
Sbjct: 938  IYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEEL 997

Query: 301  QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +  G+  DT +Y   I+GL K+  + EA+ LF  ++      D+  YN+LI  L  +G++
Sbjct: 998  KLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKV 1057

Query: 361  EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            ++A++++  L    L P+V TY+ +I G    G  D+A  +F  M      PN  TF  L
Sbjct: 1058 DVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117

Query: 421  IRGFIR 426
               + R
Sbjct: 1118 PNKYPR 1123



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 221/495 (44%), Gaps = 44/495 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S    +   + K   +PD+VT+  L+K      +I +A  L +++   GCEPDV   
Sbjct: 494 GRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMII 553

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+N L +      A  +F  + N      +   P  VTY  ++ GL KEG + KA EL
Sbjct: 554 NSLINTLYKAGRVDAAWKMFGRLKN------LKLAPTVVTYNILLTGLGKEGKILKALEL 607

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M +    PN +T+ S++         + A ++F  M      P+V+T+N I+  L +
Sbjct: 608 FGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIR 667

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT--- 238
            G++D A      M +  + PD  T  TL+ G    GRV  A ++ +      C  T   
Sbjct: 668 EGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQ 726

Query: 239 -----------------VFSYS----------------ILINGYCKNKEIEGALSLYSEM 265
                              S++                 LI   CK K+   A +++ + 
Sbjct: 727 FWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKF 786

Query: 266 LSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
               GI P +  +N L  GL   +  E+A +LF++M+  G   + +TY   +D   K+  
Sbjct: 787 TKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKR 846

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           I +  +L+  +R   CE +   +N +I  L KS  L  AL+L+  L  G   P   TY  
Sbjct: 847 INKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGP 906

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I GL   G+ ++A  +F +M +    PN + +++LI GF +  E     EL  KM +  
Sbjct: 907 LIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEG 966

Query: 445 VMPDASIVSIVVDLL 459
           + PD    +I+V+ L
Sbjct: 967 IRPDLKSYTILVECL 981



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 178/338 (52%), Gaps = 6/338 (1%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            P   ++  L+ GL   +   +A  LF  ++  G  P+ FTY  L++   ++       +L
Sbjct: 794  PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + EM +        CEPN +T+  II  L K   ++KA +L  ++   +  P   TY  +
Sbjct: 854  YSEMRSRG------CEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPL 907

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
            I G   A    +A ++F EM+D G  PN V +N++++   K+G++D A  L   M++ G+
Sbjct: 908  IDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGI 967

Query: 201  RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            RPD  +Y  L++  C+TGR++ A + F  ++  G      SY+ +ING  K++ ++ ALS
Sbjct: 968  RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALS 1027

Query: 261  LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            L+SEM ++GI PD+  +N L + L    +V+ A K+++E+Q  G+    +TY   I G  
Sbjct: 1028 LFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHS 1087

Query: 321  KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
             +G   +A  +F  + ++ C  +   +  L +   ++G
Sbjct: 1088 LSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 228/467 (48%), Gaps = 15/467 (3%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV   + + GR+      P  VT+  L+ GL  E +I++A  LF  +   GC P+  T+
Sbjct: 564  GRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITF 623

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +L++ L +     +AL +F  M   N      C P+ +TY TII GL +EG +D A   
Sbjct: 624  NSLLDCLSKNDAVDLALKMFCRMTMMN------CNPDVLTYNTIIYGLIREGRIDYAFWF 677

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELC 180
              QMK K + P+ VT  ++I G        +A ++ +E + Q  +Q N   +  +M+ + 
Sbjct: 678  FHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECIL 736

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTV 239
               +++EA    ++++ + V  D      L+   C   +   A+ +F    +++G   T+
Sbjct: 737  TEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTL 796

Query: 240  FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             SY+ L++G   +   E AL L+ +M S G  P+   +N L     +  ++ + + L+ E
Sbjct: 797  ESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSE 856

Query: 300  MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            M+  G   +  T+   I  L K+  + +A++L++ L           Y  LIDGL K+GR
Sbjct: 857  MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGR 916

Query: 360  LEIALELFRSL---PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
             E A+++F  +    CG   PN V Y+I+I G    G++D A +LF  M +  + P++ +
Sbjct: 917  SEQAMKIFEEMLDYGCG---PNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS 973

Query: 417  FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            + +L+          + ++   ++K   + PD    + +++ L K+ 
Sbjct: 974  YTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSR 1020



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 216/461 (46%), Gaps = 34/461 (7%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD +T+ ++I GL  E RI  A   F +++ F   PD  T  TL+ G+ R      A+ +
Sbjct: 653  PDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKV 711

Query: 81   FEEMANG-----NGEF--------------------------GVVCEPNTVTYTTIIDGL 109
              E  +      N +F                            VC+ + V    +I  L
Sbjct: 712  VMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVM-LPLIKVL 770

Query: 110  CKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            CK      A+ +  +  K+  I P + +Y  ++ G   +    +A  LF +M   G  PN
Sbjct: 771  CKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPN 830

Query: 169  VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
              T+N+++D   K+ ++++   L   M   G  P+A T+N ++     +  +N A +L+ 
Sbjct: 831  NFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYY 890

Query: 229  SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
             + S     T  +Y  LI+G  K    E A+ ++ EML  G  P+ VI+N L  G  +  
Sbjct: 891  ELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSG 950

Query: 289  QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            +++ A +LF +M + G+  D  +Y   ++ LC  G I EAV+ F  L++   + D  +YN
Sbjct: 951  EIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYN 1010

Query: 349  SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
             +I+GL KS RL+ AL LF  +    + P++ TY+ +I  L   G++D A  ++ +++  
Sbjct: 1011 FIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLV 1070

Query: 409  AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
             + P+V T++ LIRG        +   +  KM  +   P+ 
Sbjct: 1071 GLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNT 1111



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 224/537 (41%), Gaps = 67/537 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F +L  +      P+  T+ ++I GL    R+ EA  L   +   G +P  F+Y
Sbjct: 389 GDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSY 448

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGN---------------GEFGVVCE---------- 96
              ++   ++     A++ FE M                    E G + E          
Sbjct: 449 VLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHK 508

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P++VTY  ++    K G +DKA +LL +M  K  +P+V+   S+I     A   + 
Sbjct: 509 CGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDA 568

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A ++F  + +  + P VVT+N+++  L K GK+ +A  L   M + G  P+  T+N+LLD
Sbjct: 569 AWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLD 628

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
                  V+ A ++F  M  M C   V +Y+ +I G  +   I+ A   + +M  K + P
Sbjct: 629 CLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSP 687

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQR------------------------------ 302
           D V   TL  G+    +VE A K+  E                                 
Sbjct: 688 DYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISF 747

Query: 303 ------NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLC 355
                 N V  D       I  LCK    ++A  +F    + L     + +YN L+DGL 
Sbjct: 748 AEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLL 807

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
            S   E ALELF  +      PN  TY++++       +++K  DL+ +M      PN I
Sbjct: 808 GSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAI 867

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           T +++I   ++ N  +K ++L +++   +  P       ++D L K   S  ++  F
Sbjct: 868 THNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIF 924



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 6/221 (2%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GR      +   +L     P++V +  LI G      I  A  LF K+   G  PD+ +Y
Sbjct: 915  GRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSY 974

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T LV  LC T     A+  FEE+           +P+TV+Y  II+GL K   +D+A  L
Sbjct: 975  TILVECLCITGRIDEAVQYFEELKLTG------LDPDTVSYNFIINGLGKSRRLDEALSL 1028

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +MK++ I P++ TY ++I     A   + A +++ E+   G++P+V T+N ++     
Sbjct: 1029 FSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSL 1088

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
            +G  D+A  +   M+  G  P+  T+  L + +   G V++
Sbjct: 1089 SGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHN 1129



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 1/176 (0%)

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L E  ++E    +FD MQ+  +  +  TY T    L   G I  A      +  +    +
Sbjct: 141 LREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILN 200

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
             +YN LI  L   G    AL++++ +    + P++ TYS ++  L   G   K  +L  
Sbjct: 201 AYSYNGLIH-LLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLE 259

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +M+   + PN+ T+ + IR   R         +  +M +    PD    ++++D L
Sbjct: 260 EMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDAL 315


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/447 (32%), Positives = 233/447 (52%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    ++ ++ +S  +PD  T+TS+I G C +  +  A  +F ++   GCEP+  TY
Sbjct: 229 GNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 288

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NGLC +     A +L  EM       G++  P   T T  I  LC  G  + A  L
Sbjct: 289 STLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            + MK+K  +PNV TYT++I G C +     A  LF  M   GV PN VT+N +++ L +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N ++  A  +L+LM ++G  P+  TYN ++ G+C+ G    A  +  +M   G    + +
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I GYC +     AL +   M   G KPD   +  L  G  +I ++E AF LF+EM 
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  +  TY   IDG CK+  +  A  L   ++   C  +++ YN LI GL K     
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL + +    + PNVVTY+ MI GLC +G    A ++F  M E   +PN++T+  LI
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
           R   +  +  +   L  +++   ++PD
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 143/423 (33%), Positives = 221/423 (52%), Gaps = 6/423 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV+  F ++  ++     P A T T  I  LC      +A  LF  ++  GCEP+V+TY
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GLC +    VA+ LF  M+  +G F     PNTVTY  +I+ L +   +  A  +
Sbjct: 359 TALISGLCVSGILKVAIGLFHRMSR-DGVF-----PNTVTYNALINILVENRRIKYAFVV 412

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      PN+VTY  +I+G+C   D  +A  +   M+ +G   N+VT+N I+   C 
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    A R+LDLM   G +PD ++Y  L+ GFC   ++  A  LF  M   G      +
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GYCK+++++ A SL   M   G +P+V  +N L  GL + +    A +L   M 
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY   IDGLCKNG    A+E+F+ +    C  ++  Y+SLI  L + G++E
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF  L    L+P+ +TY  MI      G+++ A +    M +    P + T+ +LI
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 422 RGF 424
           +G 
Sbjct: 713 KGL 715



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 229/469 (48%), Gaps = 26/469 (5%)

Query: 14  ILKSCFTPDAVTFT----------SLIKGLCAESRI--------MEAAAL--FTKLRVFG 53
           ++KSC + +A+  T           L  GL A S +        M AA +  + ++   G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
            +P++  Y  ++N LC+  +   A  + +++      F     P+T TYT++I G C++ 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKV------FESEMSPDTFTYTSMILGHCRKH 264

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            +D A ++  QM  +  +PN VTY+++I G C +   NEA  L  EM+  G+ P   T  
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
             +  LC  G  ++A RL   M   G  P+ +TY  L+ G C++G +  A  LF  M   
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRD 384

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G      +Y+ LIN   +N+ I+ A  + + M   G  P++V +N +  G   +   ++A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             + + M + G +A+  TY T I G C +G    A+ +   +R   C+ D  +Y  LI G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            CK  ++E A  LF  +    L PN VTY+ +I G C D ++D A  L   M+ +   PN
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           V T+++LI G  + N  S   EL   M E  + P+    + ++D L KN
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 223/493 (45%), Gaps = 46/493 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G      +V+  +L+   + + VT+ ++IKG C       A  +   +R  GC+PD ++
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ G C+ S    A  LF EM +       +C PN VTYT +IDG CK+  +D A  
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDGYCKDEKLDTATS 551

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  MK    +PNV TY  +I G     +++ A+ L   M+++G+ PNVVT+  ++D LC
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG    A  + + MI+ G  P+  TY++L+      G+V  A+ LF  +E  G      
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  +I  Y  + ++E A +    M+  G +P +  +  L  GL      +  + L D  
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------KNEYLLAD-- 723

Query: 301 QRNGVAAD-----TWTYRT---------------------------FIDGLCKNGYIVEA 328
           QR     D     ++ Y+T                            +  L   G   EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            EL  ++       D  AYNSL+  L +   +++A+ +F+ +       ++  Y  +I  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC   +  +AR  F +M      P+ +   +LI G +R       +E LH M+    MP 
Sbjct: 844 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903

Query: 449 ASIVSIVVDLLAK 461
             I +I+    +K
Sbjct: 904 FHIYTILAREASK 916



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/272 (19%), Positives = 106/272 (38%), Gaps = 22/272 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +   + +    PD +T+  +I+      ++  A     ++   GC+P ++TY
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 708

Query: 62  TTLVNGLCRTSHTIVALNLFEEMAN--GNGEFGV-VCEPNTVTYTT-------------- 104
             L+ GL   +  ++A      + +   N  FG    + + V+  +              
Sbjct: 709 GVLIKGL--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQV 766

Query: 105 ---IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
              ++  L   G   +A ELL  M  + + P+   Y S++      ++ + A  +F  M 
Sbjct: 767 QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            QG + ++  +  ++  LC+  +  EA    + M+     PD      L+DG    G  +
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
              E    ME+     +   Y+IL     K +
Sbjct: 887 LCMEFLHIMETRRYMPSFHIYTILAREASKKR 918


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 152/468 (32%), Positives = 239/468 (51%), Gaps = 19/468 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR    + V G ++    +P+ VT+ +LI G C +   ++A  LF ++      P V  Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ GLC  S    A ++F  M N     G++  PN  TY T++DG CK   V KA EL
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNS----GML--PNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + PNVVT+  +I G C   +   A++  I+M   GV PN+  +N ++D  CK
Sbjct: 286 YXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + EA  L   + +H + PD FTY+ L+ G C   R+  A  L   M+  G      +
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GYCK   +E A+ + S+M  KGI+P+++  +TL  G  +  ++E A  L+ EM 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D   Y   IDG  K+G   EA  L   ++      ++   + LIDGLCK GR+ 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 362 IALELF-------------RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            A++LF               L   +  PN V Y+ +I GLC DG++ KA   F DM  +
Sbjct: 526 DAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            + P+V T  ++I+G  R      V+ L   + ++ ++P++S+  ++ 
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLA 633



 Score =  240 bits (613), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 148/431 (34%), Positives = 226/431 (52%), Gaps = 13/431 (3%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F VL R+  S FTP+   F  LI        + EA  ++ K+ V    P +     +++G
Sbjct: 113 FNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDG 167

Query: 68  LCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           L +         ++ +M A G         PN VTY T+IDG C++G   KA  L  +M 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARG-------ASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +K I P VV YT +IRG C     +EA+ +F  M + G+ PN+ T+N +MD  CK   + 
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A  L   M+  G+ P+  T+  L+DG C T  +  A++  + M S G    +F Y+ LI
Sbjct: 281 KALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +GYCK   +  ALSL+SE+    I PDV  ++ L  GL  + ++E A  L  EM++ G  
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY T IDG CK G + +A+E+   +     E +I  +++LIDG CK+G++E A+ L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           +  +    L+P+VV Y+ +I G   DG   +A  L  +M+E  + PNV T   LI G  +
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 427 INEPSKVIELL 437
               S  I+L 
Sbjct: 521 DGRISDAIKLF 531



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/441 (31%), Positives = 218/441 (49%), Gaps = 19/441 (4%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++ GL  + R      ++  +   G  P+V TY TL++G CR    + A  LF+EM    
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                   P  V YT +I GLC E  + +A+ +   M++  + PN+ TY +++ G+C   
Sbjct: 224 ------IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIA 277

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
              +A  L+ EM+  G+ PNVVTF +++D LCK  +M  A + L  M   GV P+ F YN
Sbjct: 278 HVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYN 337

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+DG+C  G ++ A  L   +E       VF+YSILI G C    +E A  L  EM  K
Sbjct: 338 CLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK 397

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  P+ V +NTL  G  +   +E+A ++  +M   G+  +  T+ T IDG CK G +  A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + L+  + I     D+ AY +LIDG  K G  + A  L + +    L PNV T S +I G
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517

Query: 389 LCNDGQMDKARDLFL-------------DMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           LC DG++  A  LFL             +++ +   PN + +  LI+G        K  +
Sbjct: 518 LCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASK 577

Query: 436 LLHKMKEINVMPDASIVSIVV 456
               M+   + PD     +++
Sbjct: 578 FFSDMRCSGLRPDVFTCIVII 598



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 198/385 (51%), Gaps = 8/385 (2%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN   +  +I    + G V++A  +  +M   ++ P +     V+ G      ++   ++
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           + +M+ +G  PNVVT+  ++D  C+ G   +A RL D MI+  + P    Y  L+ G C 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             R++ A+ +F +M + G    +++Y+ +++GYCK   ++ AL LY EML  G+ P+VV 
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVT 300

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
              L  GL +  ++  A K   +M   GV  + + Y   IDG CK G + EA+ L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +   D+  Y+ LI GLC   R+E A  L + +     +PN VTY+ +I G C +G M+
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA ++   M E  + PN+ITF  LI G+ +  +    + L  +M    ++PD    + ++
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 457 DLLAKNEISLNSLPSFTVHEQQEEV 481
           D   K+    N+  +F +H++ +E 
Sbjct: 481 DGHFKDG---NTKEAFRLHKEMQEA 502



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 195/427 (45%), Gaps = 39/427 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S    +   I K    PD  T++ LIKGLC   R+ EA  L  +++  G  P+  TY
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+  +   A+ +  +M     E G+  EPN +T++T+IDG CK G ++ A  L
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMT----EKGI--EPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K + P+VV YT++I G     +  EA RL  EM + G+ PNV T + ++D LCK
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 182 NGKMDEASRLL-------------DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           +G++ +A +L              + + +    P+   Y  L+ G C  GR+  A + F 
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   G +  VF+  ++I G+ +   +   + L +++L  GI P+  ++  L  G  E  
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640

Query: 289 QVERAFKLFDE--MQRNGVAADTWTYRTFIDGL----------CKNGYIVE-------AV 329
            ++ A     E     + V ++ W   T               C + Y+          +
Sbjct: 641 YLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLL 700

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
             FHT+       +I      I G     R   AL+LFR +      P++VT ++ +   
Sbjct: 701 WYFHTILKPPSPHEILKKVPFI-GQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSAC 759

Query: 390 CNDGQMD 396
            + G +D
Sbjct: 760 ADLGALD 766



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 195/466 (41%), Gaps = 47/466 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V +T+LI G   +    EA  L  +++  G  P+VFT + L++GLC+      A+ L
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 81  F------EEMANGNGEFG-VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
           F      +   +   E    +C PN V YT +I GLC +G + KA +    M+   ++P+
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V T   +I+G   A    +   L  +++  G+ PN   + V+     ++G +  A     
Sbjct: 591 VFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCG 650

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
                GV+P     +     + +  R     +L V  E   C H+ +  +  I+ +    
Sbjct: 651 ----EGVQPLDRVNSEPWGSYTIRSRF----QLCVVTEKKEC-HSSYLTAFGIHSF---- 697

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
                L  Y   + K   P  ++    F+G     +  +A +LF +MQ +    D  T  
Sbjct: 698 ----VLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVT 753

Query: 314 TFIDGLCKNGYIVEAVELFHT-LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
             +   C +   ++  E  H  +R    + D+   NSLI+   K G +  A  LF     
Sbjct: 754 VALSA-CADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFD---- 808

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE----------------NAVVPNVIT 416
           G    +V T++ MI G    GQ ++A  LF +M+E                + V+PN +T
Sbjct: 809 GTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVT 868

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKE-INVMPDASIVSIVVDLLAK 461
           F  ++          +  +    MKE  ++ P  S    +VDLL +
Sbjct: 869 FMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCR 914



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 44/280 (15%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           N+A +LF +M     QP++VT  V +      G +D    +   +   G+  D    N+L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++ +   G +  A+ LF   +    K  V +++ +I G+  + + E AL L++EM     
Sbjct: 791 INMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVGHALHGQAEEALQLFTEMK---- 842

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
                          E ++  R  K   E + + V  +  T+   +      G + E  +
Sbjct: 843 ---------------ETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQ 887

Query: 331 LFHTLRILKCEFDIRA----YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            F   R +K ++ +R     +  ++D LC++G L  A E    +P   + PN V +  ++
Sbjct: 888 HF---RSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLL 941

Query: 387 GGLCNDGQMD-----------KARDLFLDMEENAVVPNVI 415
           G     G  +           +AR   L++E + V  NVI
Sbjct: 942 GACSLQGDSNGNGNSNIKIXSEARRQLLELEPSHVGDNVI 981


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 145/430 (33%), Positives = 230/430 (53%), Gaps = 11/430 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P++V + +LI  L    R+ EA  L  ++ + GC PDV T+  ++ GLCR +       L
Sbjct: 241 PNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKL 300

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M            PN +TY  +++GLC+ G VD+A+ LL    +K   PN V +T +
Sbjct: 301 VDRMLFRG------FTPNDITYGVLMNGLCRVGKVDEAQVLL----NKVPTPNDVHFTIL 350

Query: 141 IRGFCYAKDWNEAKR-LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G+  +   +EA   L+ +M+  G +P+V TFN ++  LCK G M  A  +++ M  +G
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG 410

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TY TLLDGFC   ++  A  +   M + G +  +  Y++L+   CKN ++  AL
Sbjct: 411 CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKAL 470

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +  EM  KG KPD+   NTL  GL ++ + E A  L+ +M  +GV A+T TY T I   
Sbjct: 471 DMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAF 530

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G I EA++L + +    C  D   YN LI   CK G  E AL LF  +    LVP+ 
Sbjct: 531 LRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSN 590

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           ++ +++I GLC  G++  A +L  DM    + P+V+T++ LI G  ++    +   L +K
Sbjct: 591 ISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNK 650

Query: 440 MKEINVMPDA 449
           ++   + PDA
Sbjct: 651 LQAEGIQPDA 660



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 139/426 (32%), Positives = 220/426 (51%), Gaps = 9/426 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+  G  ++ R+L   FTP+ +T+  L+ GLC   ++ EA  L  K+      P+   
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVH 346

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T L+NG  ++     A     +    NG     C P+  T+ T+I GLCK+G +  A +
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNG-----CRPDVFTFNTLIHGLCKKGLMGSAVD 401

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++  M      PN++TYT+++ GFC      EA  +  EM  +G + N++ +NV++  LC
Sbjct: 402 MVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALC 461

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNGK+ +A  +L  M   G +PD FT+NTL+ G C   R   A  L+  M   G      
Sbjct: 462 KNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTV 521

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+ + +   I+ AL L ++ML +G   D + +N L     ++   E+A  LFDEM
Sbjct: 522 TYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEM 581

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            R  +     +    I+GLC+ G +  A+EL   +       D+  YNSLI+GLCK G +
Sbjct: 582 VRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNI 641

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  LF  L    + P+ +TY+ +I   C  G  D A  L L   ENA +PN +T+ +L
Sbjct: 642 REAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYIL 701

Query: 421 IRGFIR 426
           +  FI+
Sbjct: 702 VSNFIK 707



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 234/458 (51%), Gaps = 21/458 (4%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   +L     P   TF  ++K LC  + +  A +L   +   GC P+   Y TL++ L 
Sbjct: 195 VFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALS 254

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      AL L EEM      F + C P+  T+  +I GLC+   + +  +L+ +M  + 
Sbjct: 255 KRDRVNEALKLLEEM------FLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRG 308

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PN +TY  ++ G C     +EA+ L    +++   PN V F ++++   K+G++DEA+
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVL----LNKVPTPNDVHFTILINGYVKSGRLDEAN 364

Query: 190 RLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L D MI++G RPD FT+NTL+ G C  G +  A ++   M + GC   + +Y+ L++G
Sbjct: 365 AFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDG 424

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           +CK  ++E A  + +EM +KG + +++ +N L   L +  +V +A  +  EM   G   D
Sbjct: 425 FCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPD 484

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL-- 366
            +T+ T I GLCK     +A+ L+  + +     +   YN+LI    + G ++ AL+L  
Sbjct: 485 IFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVN 544

Query: 367 ---FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
              FR  P      + +TY+ +I   C  G  +KA  LF +M    +VP+ I+ ++LI G
Sbjct: 545 DMLFRGCPL-----DEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLING 599

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             R+ +    +ELL  M    + PD    + +++ L K
Sbjct: 600 LCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCK 637



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 228/445 (51%), Gaps = 11/445 (2%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           C  P   ++  ++  L + +    AA +F ++   G  P V+T+  ++  LC  +    A
Sbjct: 168 CCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNA 227

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
            +L  +M          C PN+V Y T+I  L K   V++A +LL +M      P+V T+
Sbjct: 228 CSLLRDMTKHG------CVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTF 281

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             VI G C     +E  +L   M+ +G  PN +T+ V+M+ LC+ GK+DEA  LL+ +  
Sbjct: 282 NDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT 341

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKE-LFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
               P+   +  L++G+  +GR++ A   L+  M   GC+  VF+++ LI+G CK   + 
Sbjct: 342 ----PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMG 397

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+ + ++M + G  P+++ + TL  G  + +Q+E A  + +EM   G   +   Y   +
Sbjct: 398 SAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLL 457

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
             LCKNG + +A+++   +    C+ DI  +N+LI GLCK  R E AL L+R +    ++
Sbjct: 458 RALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVI 517

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            N VTY+ +I      G + +A  L  DM       + IT++ LI+ F ++    K + L
Sbjct: 518 ANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGL 577

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
             +M   +++P     +++++ L +
Sbjct: 578 FDEMVRKDLVPSNISCNLLINGLCR 602



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 6/327 (1%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR-LLDLM 195
           Y  +I     AK++    +L +++ ++G+      F  IM    +     +A+R LLD+ 
Sbjct: 105 YHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMK 164

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
             +   P   +YN +LD        + A  +F  M S G   TV+++ +++   C   E+
Sbjct: 165 GVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEV 224

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A SL  +M   G  P+ V++ TL   L +  +V  A KL +EM   G   D  T+   
Sbjct: 225 DNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDV 284

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I GLC+   I E  +L   +       +   Y  L++GLC+ G+++ A  L   +P    
Sbjct: 285 IYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP---- 340

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLD-MEENAVVPNVITFDMLIRGFIRINEPSKVI 434
            PN V ++I+I G    G++D+A     D M +N   P+V TF+ LI G  +       +
Sbjct: 341 TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAV 400

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++++ M      P+    + ++D   K
Sbjct: 401 DMVNDMSANGCTPNLITYTTLLDGFCK 427



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 19/87 (21%), Positives = 43/87 (49%)

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P   +Y++++  L +      A ++F +M    V+P V TF ++++    +NE      L
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNE 463
           L  M +   +P++ +   ++  L+K +
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRD 257


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/447 (32%), Positives = 233/447 (52%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    ++ ++ +S  +PD  T+TS+I G C +  +  A  +F ++   GCEP+  TY
Sbjct: 229 GNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 288

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NGLC +     A +L  EM       G++  P   T T  I  LC  G  + A  L
Sbjct: 289 STLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            + MK+K  +PNV TYT++I G C +     A  LF  M   GV PN VT+N +++ L +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N ++  A  +L+LM ++G  P+  TYN ++ G+C+ G    A  +  +M   G    + +
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I GYC +     AL +   M   G KPD   +  L  G  +I ++E AF LF+EM 
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  +  TY   IDG CK+  +  A  L   ++   C  +++ YN LI GL K     
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL + +    + PNVVTY+ MI GLC +G    A ++F  M E   +PN++T+  LI
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
           R   +  +  +   L  +++   ++PD
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 143/423 (33%), Positives = 221/423 (52%), Gaps = 6/423 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV+  F ++  ++     P A T T  I  LC      +A  LF  ++  GCEP+V+TY
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GLC +    VA+ LF  M+  +G F     PNTVTY  +I+ L +   +  A  +
Sbjct: 359 TALISGLCVSGLLKVAIGLFHRMSR-DGVF-----PNTVTYNALINILVENRRIKYAFVV 412

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      PN+VTY  +I+G+C   D  +A  +   M+ +G   N+VT+N I+   C 
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    A R+LDLM   G +PD ++Y  L+ GFC   ++  A  LF  M   G      +
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GYCK+++++ A SL   M   G +P+V  +N L  GL + +    A +L   M 
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY   IDGLCKNG    A+E+F+ +    C  ++  Y+SLI  L + G++E
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF  L    L+P+ +TY  MI      G+++ A +    M +    P + T+ +LI
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 422 RGF 424
           +G 
Sbjct: 713 KGL 715



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 229/469 (48%), Gaps = 26/469 (5%)

Query: 14  ILKSCFTPDAVTFT----------SLIKGLCAESRI--------MEAAAL--FTKLRVFG 53
           ++KSC + +A+  T           L  GL A S +        M AA +  + ++   G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
            +P++  Y  ++N LC+  +   A  + +++      F     P+T TYT++I G C++ 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKV------FESEMSPDTFTYTSMILGHCRKH 264

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            +D A ++  QM  +  +PN VTY+++I G C +   NEA  L  EM+  G+ P   T  
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
             +  LC  G  ++A RL   M   G  P+ +TY  L+ G C++G +  A  LF  M   
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 384

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G      +Y+ LIN   +N+ I+ A  + + M   G  P++V +N +  G   +   ++A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             + + M + G +A+  TY T I G C +G    A+ +   +R   C+ D  +Y  LI G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            CK  ++E A  LF  +    L PN VTY+ +I G C D ++D A  L   M+ +   PN
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           V T+++LI G  + N  S   EL   M E  + P+    + ++D L KN
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 223/495 (45%), Gaps = 46/495 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G      +V+  +L+   + + VT+ ++IKG C       A  +   +R  GC+PD ++
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ G C+ S    A  LF EM +       +C PN VTYT +IDG CK+  +D A  
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDGYCKDEKLDTATS 551

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  MK    +PNV TY  +I G     +++ A+ L   M+++G+ PNVVT+  ++D LC
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG    A  + + MI+ G  P+  TY++L+      G+V  A+ LF  +E  G      
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  +I  Y  + ++E A +    M+  G +P +  +  L  GL      +  + L D  
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------KNEYLLAD-- 723

Query: 301 QRNGVAAD-----TWTYRT---------------------------FIDGLCKNGYIVEA 328
           QR     D     ++ Y+T                            +  L   G   EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            EL  ++       D  AYNSL+  L +   +++A+ +F+ +       ++  Y  +I  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC   +  +AR  F +M      P+ +   +LI G +R       +E LH M+    MP 
Sbjct: 844 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903

Query: 449 ASIVSIVVDLLAKNE 463
             I +I+    +K  
Sbjct: 904 FHIYTILAREASKKR 918



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 59/151 (39%), Gaps = 6/151 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +LG ++     PD   + SL+  L     +  A  +F  +   GCE  +  Y
Sbjct: 778 GRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGY 837

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+  LC+      A   FE M            P+ V    +IDGL ++G+ D   E 
Sbjct: 838 KELICALCQLHRRKEARITFENM------LMRTWNPDDVVQAVLIDGLLRDGYKDLCMEF 891

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
           L  M+ +   P+   YT + R     + W  
Sbjct: 892 LHIMETRRYMPSFHIYTILAREASKKRSWKH 922


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/447 (32%), Positives = 233/447 (52%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    ++ ++ +S  +PD  T+TS+I G C +  +  A  +F ++   GCEP+  TY
Sbjct: 229 GNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 288

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NGLC +     A +L  EM       G++  P   T T  I  LC  G  + A  L
Sbjct: 289 STLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            + MK+K  +PNV TYT++I G C +     A  LF  M   GV PN VT+N +++ L +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N ++  A  +L+LM ++G  P+  TYN ++ G+C+ G    A  +  +M   G    + +
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I GYC +     AL +   M   G KPD   +  L  G  +I ++E AF LF+EM 
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  +  TY   IDG CK+  +  A  L   ++   C  +++ YN LI GL K     
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL + +    + PNVVTY+ MI GLC +G    A ++F  M E   +PN++T+  LI
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
           R   +  +  +   L  +++   ++PD
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 143/423 (33%), Positives = 221/423 (52%), Gaps = 6/423 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV+  F ++  ++     P A T T  I  LC      +A  LF  ++  GCEP+V+TY
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GLC +    VA+ LF  M+  +G F     PNTVTY  +I+ L +   +  A  +
Sbjct: 359 TALISGLCVSGLLKVAIGLFHRMSR-DGVF-----PNTVTYNALINILVENRRIKYAFVV 412

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      PN+VTY  +I+G+C   D  +A  +   M+ +G   N+VT+N I+   C 
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    A R+LDLM   G +PD ++Y  L+ GFC   ++  A  LF  M   G      +
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GYCK+++++ A SL   M   G +P+V  +N L  GL + +    A +L   M 
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY   IDGLCKNG    A+E+F+ +    C  ++  Y+SLI  L + G++E
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF  L    L+P+ +TY  MI      G+++ A +    M +    P + T+ +LI
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 422 RGF 424
           +G 
Sbjct: 713 KGL 715



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 229/469 (48%), Gaps = 26/469 (5%)

Query: 14  ILKSCFTPDAVTFT----------SLIKGLCAESRI--------MEAAAL--FTKLRVFG 53
           ++KSC + +A+  T           L  GL A S +        M AA +  + ++   G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
            +P++  Y  ++N LC+  +   A  + +++      F     P+T TYT++I G C++ 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKV------FESEMSPDTFTYTSMILGHCRKH 264

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            +D A ++  QM  +  +PN VTY+++I G C +   NEA  L  EM+  G+ P   T  
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
             +  LC  G  ++A RL   M   G  P+ +TY  L+ G C++G +  A  LF  M   
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 384

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G      +Y+ LIN   +N+ I+ A  + + M   G  P++V +N +  G   +   ++A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             + + M + G +A+  TY T I G C +G    A+ +   +R   C+ D  +Y  LI G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            CK  ++E A  LF  +    L PN VTY+ +I G C D ++D A  L   M+ +   PN
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           V T+++LI G  + N  S   EL   M E  + P+    + ++D L KN
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 223/493 (45%), Gaps = 46/493 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G      +V+  +L+   + + VT+ ++IKG C       A  +   +R  GC+PD ++
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ G C+ S    A  LF EM +       +C PN VTYT +IDG CK+  +D A  
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDGYCKDEKLDTATS 551

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  MK    +PNV TY  +I G     +++ A+ L   M+++G+ PNVVT+  ++D LC
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG    A  + + MI+ G  P+  TY++L+      G+V  A+ LF  +E  G      
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  +I  Y  + ++E A +    M+  G +P +  +  L  GL      +  + L D  
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------KNEYLLAD-- 723

Query: 301 QRNGVAAD-----TWTYRT---------------------------FIDGLCKNGYIVEA 328
           QR     D     ++ Y+T                            +  L   G   EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            EL  ++       D  AYNSL+  L +   +++A+ +F+ +       ++  Y  +I  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC   +  +AR  F +M      P+ +   +LI G +R       +E LH M+    MP 
Sbjct: 844 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903

Query: 449 ASIVSIVVDLLAK 461
             I +I+    +K
Sbjct: 904 FHIYTILAREASK 916



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/272 (19%), Positives = 106/272 (38%), Gaps = 22/272 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +   + +    PD +T+  +I+      ++  A     ++   GC+P ++TY
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 708

Query: 62  TTLVNGLCRTSHTIVALNLFEEMAN--GNGEFGV-VCEPNTVTYTT-------------- 104
             L+ GL   +  ++A      + +   N  FG    + + V+  +              
Sbjct: 709 GVLIKGL--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQV 766

Query: 105 ---IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
              ++  L   G   +A ELL  M  + + P+   Y S++      ++ + A  +F  M 
Sbjct: 767 QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            QG + ++  +  ++  LC+  +  EA    + M+     PD      L+DG    G  +
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
              E    ME+     +   Y+IL     K +
Sbjct: 887 LCMEFLHIMETRRYMPSFHIYTILAREASKKR 918


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 251/489 (51%), Gaps = 32/489 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+AV++T +++GLCA  R  EA AL   ++  G   DV TY TL+ GLC  +    AL L
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172

Query: 81  FEEMANGNGEFGVVC-----------------------------EPNTVTYTTIIDGLCK 111
             EM        V+                              EP+ + +T  ID LCK
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
           +G + KA ++   M  + ++PNVVTY  +I   C      EA  L  EM D+GV P+VVT
Sbjct: 233 KGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           +N ++  L    +MD A  LL+ MIQ    V PD  T+N+++ G C  GR+  A  +   
Sbjct: 293 YNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   GC   + +Y+ LI G+ +  ++  A++L SE++S G++PD   ++ L  G  ++ +
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V+RA      M + G+ A+ + Y   +  LC+ G + +A+ LF+ +  + C  D  AY++
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD-MNCGLDAVAYST 471

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++ G CKSG ++ A +L + +    L P+ VTYSI+I      G +++A  +   M  + 
Sbjct: 472 MMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASG 531

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            VP+V  FD LI+G+    + +K+++L+H+M+  NV  D   +  +V L  +  +  ++ 
Sbjct: 532 FVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLVRLPQQMPLLWSAT 591

Query: 470 PSFTVHEQQ 478
            +      Q
Sbjct: 592 TALVARSHQ 600



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 226/466 (48%), Gaps = 45/466 (9%)

Query: 37  SRIMEAAALFTKLRVFGCEPDV---FTYTTLVNGLCRTSHTI-VALNLFEEMANGNGEFG 92
           +R + AA +     +    PDV    +Y  ++  LCR    +  AL+L  +M+    E  
Sbjct: 52  NRRLRAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSR---EAH 108

Query: 93  VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN V+YT ++ GLC     D+A  LL  M+   ++ +VVTY ++IRG C A + + 
Sbjct: 109 PAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDG 168

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  L  EM   GV PNV+ ++ ++   C++G+  + S++ + M + GV PD   +   +D
Sbjct: 169 ALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFID 228

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C  GR+  A ++   M   G +  V +Y++LIN  CK   +  AL+L +EM  KG+ P
Sbjct: 229 DLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAP 288

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG--VAADTWTYRTFIDGLCKNGYIVEAVE 330
           DVV +NTL  GL  + +++ A  L +EM +    V  D  T+ + I GLCK G + +A+ 
Sbjct: 289 DVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAIS 348

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG-- 388
           +   +    C  ++  YN LI G  +  ++ +A+ L   L    L P+  TYSI+I G  
Sbjct: 349 VREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFS 408

Query: 389 ---------------------------------LCNDGQMDKARDLFLDMEENAVVPNVI 415
                                            LC  G M++A  LF +M+ N  + + +
Sbjct: 409 KLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL-DAV 467

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +  ++ G  +  +     +LL  M +  + PDA   SI++++ AK
Sbjct: 468 AYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAK 513



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 170/342 (49%), Gaps = 5/342 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     V   +++    P+ VT+  LI  LC E  + EA AL  ++   G  PDV TY
Sbjct: 234 GRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTY 293

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GL        A+ L EEM  G+     + EP+ VT+ ++I GLCK G + +A  +
Sbjct: 294 NTLIAGLSGVLEMDGAMGLLEEMIQGD----TLVEPDVVTFNSVIHGLCKIGRMRQAISV 349

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M ++    N+VTY  +I GF      N A  L  E++  G++P+  T++++++   K
Sbjct: 350 REMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSK 409

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++D A   L  M Q G+R + F Y  LL   C  G +  A  LF  M+ M C     +
Sbjct: 410 LWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD-MNCGLDAVA 468

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS ++ G CK+ +I+ A  L  +ML +G+ PD V ++ L     ++  +E A ++  +M 
Sbjct: 469 YSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMA 528

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            +G   D   + + I G    G I + ++L H +R      D
Sbjct: 529 ASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAID 570


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 225/430 (52%), Gaps = 6/430 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +PD VT+ SLI G      + E A+LF +++  GC PD+ TY  L+N  C+      A 
Sbjct: 261 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 320

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
             F EM N NG      +PN VTY+T+ID  CKEG +  A +LL  M+   + PN  TYT
Sbjct: 321 EYFSEMKN-NG-----LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYT 374

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I   C A +  EA +L  +M+  GV+ N+VT+  ++D LCK G+M EA  +   M++ 
Sbjct: 375 SLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKD 434

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P+   Y  L+ G+    R+  A ++   M     K  +  Y  +I G+C  +++E  
Sbjct: 435 GISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEET 494

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             +  EM S+GI  + VI  T+    F+  +   A   F EMQ  GV A   TY   IDG
Sbjct: 495 KLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDG 554

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LC+ G +  AV+ F  +  L  + ++  Y SLIDGLC +  +E A +LF  + C  + P+
Sbjct: 555 LCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPD 614

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +  ++ +I G    G + +A  L   M E A+  ++  +  L+ GF +  E  +  +  +
Sbjct: 615 ITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFN 674

Query: 439 KMKEINVMPD 448
           +M E  ++P+
Sbjct: 675 EMIEKGILPE 684



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 141/438 (32%), Positives = 235/438 (53%), Gaps = 8/438 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P   T+  +I  LC E  +  +  LF ++R  G  PDV TY +L++G  +        +
Sbjct: 227 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVAS 286

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF EM +      V C P+ +TY  +I+  CK   + +A E   +MK+  +KPNVVTY++
Sbjct: 287 LFNEMKD------VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 340

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I  FC       A +L  +M   G+ PN  T+  ++D  CK G + EA +LL+ M+Q G
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V+ +  TY  LLDG C  GR+  A+E+F SM   G       Y+ L++GY K + +E A+
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 460

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +  +M    IKPD++++ ++  G     ++E    + +EM+  G++A+     T ID  
Sbjct: 461 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 520

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPN 378
            K G   +A+  F  ++ +  E  I  Y  LIDGLC++G +E+A++ F R L  G L PN
Sbjct: 521 FKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG-LQPN 579

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V  Y+ +I GLC +  ++ A+ LF +M+   + P++  F  LI G ++     + + L+ 
Sbjct: 580 VAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 639

Query: 439 KMKEINVMPDASIVSIVV 456
           +M E+ +  D  + + +V
Sbjct: 640 RMTELAIEFDLHVYTSLV 657



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 210/407 (51%), Gaps = 6/407 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++   F     +  +   P+ VT+++LI   C E  +  A  L   +R  G  P+ FTYT
Sbjct: 315 KMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYT 374

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++  C+  +   A  L  +M       GV  + N VTYT ++DGLCK G + +A+E+ 
Sbjct: 375 SLIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIVTYTALLDGLCKAGRMIEAEEVF 428

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M    I PN   YT+++ G+  A+   +A ++  +M +  ++P+++ +  I+   C  
Sbjct: 429 RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQ 488

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K++E   +L+ M   G+  +     T++D +   G+ + A   F  M+ +G + T+ +Y
Sbjct: 489 RKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 548

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
            +LI+G C+   +E A+  +  MLS G++P+V ++ +L  GL   + +E A KLFDEMQ 
Sbjct: 549 CVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQC 608

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  D   +   IDG  K+G + EA+ L   +  L  EFD+  Y SL+ G  + G L  
Sbjct: 609 RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ 668

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           A + F  +    ++P  V    ++      GQ+D+A +L  +ME  A
Sbjct: 669 ARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMA 715



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 199/379 (52%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           +C   +  +  +     + G +++A E   +M++    P   +   ++     + +    
Sbjct: 155 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 214

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           ++ F +M+  G+ P+V T+NV++D LCK G ++ + RL   M + G+ PD  TYN+L+DG
Sbjct: 215 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 274

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +   G +     LF  M+ +GC   + +Y+ LIN YCK +++  A   +SEM + G+KP+
Sbjct: 275 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 334

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV ++TL     +   ++ A KL  +M+R G+  + +TY + ID  CK G + EA +L +
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +     + +I  Y +L+DGLCK+GR+  A E+FRS+    + PN   Y+ ++ G     
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           +M+ A  +   M E  + P++I +  +I G     +  +   +L +MK   +  +  I +
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 514

Query: 454 IVVDLLAKNEISLNSLPSF 472
            ++D   K   S ++L  F
Sbjct: 515 TIIDAYFKAGKSSDALNFF 533



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 206/422 (48%), Gaps = 6/422 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           EA   F+++R F   P   +   L++ L ++ +  +    F +M       G    P+  
Sbjct: 178 EANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM------IGAGIAPSVF 231

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  +ID LCKEG ++ ++ L +QM++  + P+VVTY S+I G+       E   LF EM
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 291

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            D G  P+++T+N +++  CK  KM  A      M  +G++P+  TY+TL+D FC  G +
Sbjct: 292 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 351

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A +L   M   G     F+Y+ LI+  CK   +  A  L ++ML  G+K ++V +  L
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +  ++  A ++F  M ++G++ +   Y   + G  K   + +A+++   +     
Sbjct: 412 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 471

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D+  Y S+I G C   +LE    +   +    +  N V  + +I      G+   A +
Sbjct: 472 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 531

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            F +M++  V   ++T+ +LI G          ++   +M  + + P+ ++ + ++D L 
Sbjct: 532 FFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 591

Query: 461 KN 462
            N
Sbjct: 592 XN 593



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 178/345 (51%), Gaps = 6/345 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++  + +L  +L++    + VT+T+L+ GLC   R++EA  +F  +   G  P+   Y
Sbjct: 384 GNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVY 443

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T LV+G  +      A+ + ++M   N       +P+ + Y +II G C +  +++ K +
Sbjct: 444 TALVHGYIKAERMEDAMKILKQMTECN------IKPDLILYGSIIWGHCSQRKLEETKLI 497

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK + I  N V  T++I  +  A   ++A   F EM D GV+  +VT+ V++D LC+
Sbjct: 498 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCE 557

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++ A      M+  G++P+   Y +L+DG C    +  AK+LF  M+  G    + +
Sbjct: 558 AGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITA 617

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+G  K+  ++ AL L S M    I+ D+ ++ +L  G  +  ++ +A K F+EM 
Sbjct: 618 FTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMI 677

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
             G+  +       +    K G + EA+EL + +  +   F+  A
Sbjct: 678 EKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFDA 722


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 152/468 (32%), Positives = 240/468 (51%), Gaps = 19/468 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR    + V G ++    +P+ VT+ +LI G C +   ++A  LF ++      P V  Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ GLC  S    A ++F  M N     G++  PN  TY T++DG CK   V KA EL
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNS----GML--PNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + PNVVT+  +I G C   +   A++  I+M   GV PN+  +N ++D  CK
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + EA  L   + +H + PD FTY+ L+ G C   R+  A  L   M+  G      +
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GYCK   +E A+ + S+M  KGI+P+++  +TL  G  +  ++E A  L+ EM 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D   Y   IDG  K+G   EA  L   ++      ++   + LIDGLCK GR+ 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 362 IALELFRS-------------LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            A++LF +             L   +  PN V Y+ +I GLC DG++ KA   F DM  +
Sbjct: 526 DAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            + P+V T  ++I+G  R      V+ L   + ++ ++P++S+  ++ 
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLA 633



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 148/431 (34%), Positives = 226/431 (52%), Gaps = 13/431 (3%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F VL R+  S FTP+   F  LI        + EA  ++ K+ V    P +     +++G
Sbjct: 113 FNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDG 167

Query: 68  LCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           L +         ++ +M A G         PN VTY T+IDG C++G   KA  L  +M 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARG-------ASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +K I P VV YT +IRG C     +EA+ +F  M + G+ PN+ T+N +MD  CK   + 
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A  L   M+  G+ P+  T+  L+DG C T  +  A++  + M S G    +F Y+ LI
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +GYCK   +  ALSL+SE+    I PDV  ++ L  GL  + ++E A  L  EM++ G  
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY T IDG CK G + +A+E+   +     E +I  +++LIDG CK+G++E A+ L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           +  +    L+P+VV Y+ +I G   DG   +A  L  +M+E  + PNV T   LI G  +
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 427 INEPSKVIELL 437
               S  I+L 
Sbjct: 521 DGRISDAIKLF 531



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/441 (31%), Positives = 218/441 (49%), Gaps = 19/441 (4%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++ GL  + R      ++  +   G  P+V TY TL++G CR    + A  LF+EM    
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                   P  V YT +I GLC E  + +A+ +   M++  + PN+ TY +++ G+C   
Sbjct: 224 ------IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIA 277

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
              +A  L+ EM+  G+ PNVVTF +++D LCK  +M  A + L  M   GV P+ F YN
Sbjct: 278 HVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYN 337

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+DG+C  G ++ A  L   +E       VF+YSILI G C    +E A  L  EM  K
Sbjct: 338 CLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK 397

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  P+ V +NTL  G  +   +E+A ++  +M   G+  +  T+ T IDG CK G +  A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + L+  + I     D+ AY +LIDG  K G  + A  L + +    L PNV T S +I G
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517

Query: 389 LCNDGQMDKARDLFL-------------DMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           LC DG++  A  LFL             +++ +   PN + +  LI+G        K  +
Sbjct: 518 LCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASK 577

Query: 436 LLHKMKEINVMPDASIVSIVV 456
               M+   + PD     +++
Sbjct: 578 FFSDMRCSGLRPDVFTCIVII 598



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 198/385 (51%), Gaps = 8/385 (2%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN   +  +I    + G V++A  +  +M   ++ P +     V+ G      ++   ++
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           + +M+ +G  PNVVT+  ++D  C+ G   +A RL D MI+  + P    Y  L+ G C 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             R++ A+ +F +M + G    +++Y+ +++GYCK   ++ AL LY EML  G+ P+VV 
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
              L  GL +  ++  A K   +M   GV  + + Y   IDG CK G + EA+ L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +   D+  Y+ LI GLC   R+E A  L + +     +PN VTY+ +I G C +G M+
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA ++   M E  + PN+ITF  LI G+ +  +    + L  +M    ++PD    + ++
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 457 DLLAKNEISLNSLPSFTVHEQQEEV 481
           D   K+    N+  +F +H++ +E 
Sbjct: 481 DGHFKDG---NTKEAFRLHKEMQEA 502



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 166/323 (51%), Gaps = 19/323 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+   +  LI G C    + EA +L +++      PDVFTY+ L+ GLC       A  L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM       G +  PN VTY T+IDG CKEG ++KA E+  QM +K I+PN++T++++
Sbjct: 391 LQEMKKK----GFL--PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C A     A  L+ EM+ +G+ P+VV +  ++D   K+G   EA RL   M + G+
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVS-------------MESMGCKHTVFSYSILIN 247
            P+ FT + L+DG C  GR++ A +LF++             ++   C      Y+ LI 
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G C +  I  A   +S+M   G++PDV     +  G F    +     L  ++ + G+  
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624

Query: 308 DTWTYRTFIDGLCKNGYIVEAVE 330
           ++  YR    G  ++GY+  A+ 
Sbjct: 625 NSSVYRVLAKGYEESGYLKSALR 647



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 161/318 (50%), Gaps = 19/318 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S    +   I K    PD  T++ LIKGLC   R+ EA  L  +++  G  P+  TY
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+  +   A+ +  +M     E G+  EPN +T++T+IDG CK G ++ A  L
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMT----EKGI--EPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K + P+VV YT++I G     +  EA RL  EM + G+ PNV T + ++D LCK
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 182 NGKMDEASRLL-------------DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           +G++ +A +L              + + +    P+   Y  L+ G C  GR+  A + F 
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   G +  VF+  ++I G+ +   +   + L +++L  GI P+  ++  L  G  E  
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640

Query: 289 QVERAFKLFDEMQRNGVA 306
            ++ A +  +++   G+ 
Sbjct: 641 YLKSALRCSEDLSGIGIG 658


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 230/440 (52%), Gaps = 6/440 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           +++  L++ L    R       +  +   GC P+ +TY  L+  LC+      A ++F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           MA         C PN  +Y+ +I GLC+   VD+A ELL +M D   +PNVVTY S++ G
Sbjct: 78  MAAQG------CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG 131

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C      EA  LF  M+ +G  P+ V +NV++D   K G M EA RL + M++ G  P 
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
            FTYN+LL GF   G     + LF  M   GC   +F+++ L++G+CK  ++  A  L+ 
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM S G  PDVV +NTL  G+    +   A +L  EM R+GV  D  +Y   IDG  K+G
Sbjct: 252 EMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            +  A++LF+ +     E D  +Y+++ID LC++G++  A  +F+ +      P+     
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVI 371

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            ++ GLC   ++ ++ +LF  M +   VP +  +++L+    +      V E+ H++ E 
Sbjct: 372 PLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTER 431

Query: 444 NVMPDASIVSIVVDLLAKNE 463
              PD  I  ++++ L +++
Sbjct: 432 GFSPDVEISKVILETLRRSD 451



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 214/413 (51%), Gaps = 6/413 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR  H +     +L +   P+  T+  L++ LC   R  EA ++F  +   GC P+VF+Y
Sbjct: 31  GRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSY 90

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+ GLCR      A  L  EM +G        +PN VTY +++ GLCK G + +A +L
Sbjct: 91  SILIAGLCRGQKVDEAAELLNEMIDGGH------QPNVVTYGSLLSGLCKMGKLKEAVDL 144

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  +   P+ V Y  +I GF    D  EA RLF EM+++G  P V T+N ++    +
Sbjct: 145 FSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSR 204

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+      L   M++ G  P+ FT+N LLDGFC  G +  A  LF+ M S+GC   V S
Sbjct: 205 KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVS 264

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+ G C   +   A  L  EM+  G+ PD+V +N L  G  +   ++ A KLF E+ 
Sbjct: 265 YNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP 324

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++G+  D ++Y T ID LC+ G +  A  +F  +       D      L+ GLC+  RL 
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLT 384

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            + ELF+++     VP +  Y++++  LC   + D   ++F ++ E    P+V
Sbjct: 385 ESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 190/366 (51%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            T++Y  +++ L K G  D        M      PN  TY  ++R  C A+ + EA+ +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M  QG  PNV ++++++  LC+  K+DEA+ LL+ MI  G +P+  TY +LL G C  
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G++  A +LF  M   GC      Y++LI+G+ K  ++  A  L+ EML KG  P V  +
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N+L  G     +  R   LF +M R G   + +T+   +DG CK G +VEA  LF  +R 
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
           L C  D+ +YN+L+ G+C  G+   A  L R +    + P++V+Y+I+I G    G +D 
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  LF ++ ++ + P+  ++  +I    R  +      +   M      PDA++V  +V 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375

Query: 458 LLAKNE 463
            L + E
Sbjct: 376 GLCRGE 381



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 162/319 (50%), Gaps = 6/319 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++     +  R++     PD V +  LI G   +  + EA  LF ++   GC P VFT
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G  R        +LF++M          C PN  T+  ++DG CK G + +A  
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQG------CVPNIFTFNNLLDGFCKMGDMVEAHR 248

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L+M+     P+VV+Y +++RG C     +EA+RL  EM+  GV P++V++N+++D   
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYS 308

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G +D A +L   + + G+ PDAF+Y+T++D  C  G+V  A  +F  M + G      
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA 368

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
               L+ G C+ + +  +  L+  M+     P +  +N L   L +  + +   ++F E+
Sbjct: 369 VVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHEL 428

Query: 301 QRNGVAADTWTYRTFIDGL 319
              G + D    +  ++ L
Sbjct: 429 TERGFSPDVEISKVILETL 447



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 108/225 (48%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           H   SY+ L+    K+   +     Y++ML  G  P+   +  L   L +  + E A  +
Sbjct: 15  HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F  M   G + + ++Y   I GLC+   + EA EL + +     + ++  Y SL+ GLCK
Sbjct: 75  FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G+L+ A++LF  +      P+ V Y+++I G    G M +A  LF +M E   +P V T
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++ L+ GF R  E  +V  L   M     +P+    + ++D   K
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/504 (29%), Positives = 255/504 (50%), Gaps = 44/504 (8%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V  G+ +L  I K        T+ + +KG+C+   +  A  +  ++   GC P+V  YTT
Sbjct: 401 VRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTT 460

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+    + S    A+ + +EM     E G+   P+T  Y ++I GL K   +D+A+  LL
Sbjct: 461 LIKTFLQKSRFGDAVRVLKEMR----EQGIA--PDTFCYNSLIIGLSKAKKMDEARSFLL 514

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M +   KP+  TY + I G+  A ++  A +   EM++ GV PN V    +++E CK G
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKG 574

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ EA      M++ G+  DA TY  L++G    G+VN A+E+F  M   G    VFSY 
Sbjct: 575 KVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYG 634

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G+ K   ++ A S++ EM+  G+  +V+I+N L  G     ++E+A +L DEM   
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  TY T IDG CK+G + EA +LF  +++     D   Y +L+DG C+   +E A
Sbjct: 695 GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 754

Query: 364 LELFR---------SLPCGVLV-----------------------------PNVVTYSIM 385
           + +F          S P   L+                             PN VTY+IM
Sbjct: 755 ITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIM 814

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I  LC +G ++ A++LF  M++  ++P VIT+  L+ G+ ++   S++  +  ++    +
Sbjct: 815 IDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGI 874

Query: 446 MPDASIVSIVVDLLAKNEISLNSL 469
            PD  + S++++   K  ++  +L
Sbjct: 875 EPDNIMYSVIINAFLKEGMTTKAL 898



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 228/474 (48%), Gaps = 35/474 (7%)

Query: 17  SC--FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           SC    P   ++  LI GLC + R+ +A +L  ++   G   D   Y+ L++GL +  + 
Sbjct: 272 SCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNA 331

Query: 75  IVALNLFEEMA-------------------------------NGNGEFGVVCEPNTVTYT 103
             A  L  EM                                +G   FGV   P    Y 
Sbjct: 332 DAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVT--PGARAYA 389

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           ++I+G  +E  V K  ELL+++K +NI  +  TY + ++G C + D + A  +  EM   
Sbjct: 390 SLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGAS 449

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G +PNVV +  ++    +  +  +A R+L  M + G+ PD F YN+L+ G     +++ A
Sbjct: 450 GCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEA 509

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           +   + M   G K   F+Y   I+GY +  E   A     EML  G+ P+ V+   L   
Sbjct: 510 RSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINE 569

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
             +  +V  A   F  M   G+  D  TY   ++GL KNG + +A E+FH +R      D
Sbjct: 570 YCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPD 629

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           + +Y +LIDG  K G ++ A  +F  +    L  NV+ Y++++GG C  G+++KA++L  
Sbjct: 630 VFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLD 689

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +M      PN +T+  +I G+ +  + ++  +L  +MK   ++PD+ + + +VD
Sbjct: 690 EMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD 743



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 209/435 (48%), Gaps = 17/435 (3%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           VSHGF +           D + +   I  +  E  + +A ALF  +  FG  P    Y +
Sbjct: 342 VSHGFSI-----------DPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYAS 390

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+ G  R  +      L  E+   N    +V  P   TY T + G+C  G +D A  ++ 
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRN----IVISP--YTYGTAVKGMCSSGDLDGAYNIVK 444

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M     +PNVV YT++I+ F     + +A R+  EM +QG+ P+   +N ++  L K  
Sbjct: 445 EMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAK 504

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           KMDEA   L  M+++G +PDAFTY   + G+   G    A +    M   G        +
Sbjct: 505 KMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCT 564

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LIN YCK  ++  A S +  M+ +GI  D   +  L  GL +  +V  A ++F EM+  
Sbjct: 565 GLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGK 624

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+A D ++Y T IDG  K G + +A  +F  +       ++  YN L+ G C+SG +E A
Sbjct: 625 GIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKA 684

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            EL   +      PN VTY  +I G C  G + +A  LF +M+   +VP+   +  L+ G
Sbjct: 685 KELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDG 744

Query: 424 FIRINEPSKVIELLH 438
             R+N+  + I +  
Sbjct: 745 CCRLNDVERAITIFE 759



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 185/424 (43%), Gaps = 51/424 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V  T LI   C + +++EA + F  +   G   D  TYT L+NGL +      A  +
Sbjct: 558 PNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEI 617

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM  G G       P+  +Y T+IDG  K G + KA  +  +M    +  NV+ Y  +
Sbjct: 618 FHEM-RGKG-----IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNML 671

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GFC + +  +AK L  EM  +G  PN VT+  I+D  CK+G + EA +L D M   G+
Sbjct: 672 LGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGL 731

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT----------VF---------- 240
            PD+F Y TL+DG C    V  A  +F + E  GC  +          VF          
Sbjct: 732 VPDSFVYTTLVDGCCRLNDVERAITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTD 790

Query: 241 -------------------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
                              +Y+I+I+  CK   +E A  L+  M    + P V+ + +L 
Sbjct: 791 MINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLL 850

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-- 339
            G  ++ +    F +FDE+   G+  D   Y   I+   K G   +A+ L   +      
Sbjct: 851 NGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAV 910

Query: 340 ---CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C+  I    +L+ G  K G +E+A ++  ++     +P+  T   +I   C      
Sbjct: 911 DDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQR 970

Query: 397 KARD 400
            A D
Sbjct: 971 MAAD 974



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 182/407 (44%), Gaps = 49/407 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V         +++     DA T+T L+ GL    ++ +A  +F ++R  G  PDVF+Y
Sbjct: 574 GKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSY 633

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G  +  +   A ++F+EM             N + Y  ++ G C+ G ++KAKEL
Sbjct: 634 GTLIDGFSKLGNMQKASSIFDEMVQAG------LTSNVIIYNMLLGGFCRSGEIEKAKEL 687

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  K   PN VTY ++I G+C + D  EA +LF EM  +G+ P+   +  ++D  C+
Sbjct: 688 LDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCR 747

Query: 182 NGKMDEA--------------------------------------SRLLDLMIQHGVRPD 203
              ++ A                                      +RL+D       +P+
Sbjct: 748 LNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPN 807

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             TYN ++D  C  G +  AKELF  M+      TV +Y+ L+NGY K        S++ 
Sbjct: 808 DVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFD 867

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-----QRNGVAADTWTYRTFIDG 318
           E+++ GI+PD ++++ +     +     +A  L D+M       +G      T R  + G
Sbjct: 868 EVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSG 927

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             K G +  A ++   +  LK   D      LI+  C S    +A +
Sbjct: 928 FAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 207/459 (45%), Gaps = 30/459 (6%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL------N 79
           F  LI G   +  + EA  +F+  +    +        LV  L R +H + AL      +
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLD--------LVPSLARCNHLLDALLKRNRLD 206

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF ++  G  E  VV +  +  Y  +I   C++G V  AK++LL+ +++     + T T 
Sbjct: 207 LFWDVYKGMVERNVVFDVQS--YEMLIGAHCRDGNVQLAKDVLLKTEEE-----LGTATL 259

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            +         +EA  L   M  +G+ P+  ++N+++D LCK  ++++A  LL  M   G
Sbjct: 260 NV---------DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVG 310

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           +  D   Y+ L+DG       + A  L   M S G       Y   I    K   +E A 
Sbjct: 311 LFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAK 370

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +L+  M++ G+ P    + +L  G F    V + ++L  E+++  +    +TY T + G+
Sbjct: 371 ALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGM 430

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C +G +  A  +   +    C  ++  Y +LI    +  R   A+ + + +    + P+ 
Sbjct: 431 CSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDT 490

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             Y+ +I GL    +MD+AR   L+M EN   P+  T+   I G+I   E +   + + +
Sbjct: 491 FCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKE 550

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           M E  V+P+  + + +++   K    + +  +F    +Q
Sbjct: 551 MLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQ 589



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 154/329 (46%), Gaps = 16/329 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +   ++++  T + + +  L+ G C    I +A  L  ++   G  P+  T
Sbjct: 643 LGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVT 702

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++G C++     A  LF+EM       G+V  P++  YTT++DG C+   V++A  
Sbjct: 703 YCTIIDGYCKSGDLAEAFQLFDEMKLK----GLV--PDSFVYTTLVDGCCRLNDVERAIT 756

Query: 121 LLLQMKDKNIKPNVVTYTSVIRG-FCYAK---DWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
            + +  +K    +   + ++I   F + K     +   RL     D+  +PN VT+N+++
Sbjct: 757 -IFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMI 815

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D LCK G ++ A  L   M +  + P   TY +LL+G+   GR +    +F  + + G +
Sbjct: 816 DYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIE 875

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSK-----GIKPDVVIHNTLFVGLFEIHQVE 291
                YS++IN + K      AL L  +M +K     G K  +     L  G  ++ ++E
Sbjct: 876 PDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 935

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            A K+ + M R     D+ T    I+  C
Sbjct: 936 VAEKVVENMVRLKYIPDSSTVIELINESC 964


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 232/450 (51%), Gaps = 7/450 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  R+L+   +   VT   LI G C   R+ +A     +    G EPD  TY
Sbjct: 138 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 197

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T VNGLC+  H   AL + + M     +      P+  TY  +++ LCK G +++AK +
Sbjct: 198 NTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGI 251

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM D+   P++ T+ ++I   C      EA  L  ++  +GV P+V TFN++++ LCK
Sbjct: 252 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 311

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A RL + M   G  PD  TYNTL+D  C  G++  A +L   MES GC  +  +
Sbjct: 312 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 371

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G CK   IE A  ++ +M  +GI  + +  NTL  GL +  +++ AF+L ++M 
Sbjct: 372 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 431

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY + +   CK G I +A ++  T+     E D+  Y +LI+GLCK+GR +
Sbjct: 432 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 491

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL++ R +    + P    Y+ ++  L     +  A  LF +M E    P+ +T+ ++ 
Sbjct: 492 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 551

Query: 422 RGFIRINEPSK-VIELLHKMKEINVMPDAS 450
           RG  R   P K   + + +M +   +P+ S
Sbjct: 552 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 581



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 221/428 (51%), Gaps = 7/428 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV      + + +   F PD +T+ + + GLC    +  A  +   +   G +PDVFT
Sbjct: 172 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 231

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +VN LC+      A  +  +M +        C P+  T+ T+I  LC    +++A +
Sbjct: 232 YNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTGNRLEEALD 285

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  Q+  K + P+V T+  +I   C   D + A RLF EM + G  P+ VT+N ++D LC
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 345

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GK+ +A  LL  M   G      TYNT++DG C   R+  A+E+F  M+  G      
Sbjct: 346 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 405

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LI+G CK+K+I+ A  L ++M+S+G++P+ + +N++     +   +++A  + + M
Sbjct: 406 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 465

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D  TY T I+GLCK G    A+++   +RI       +AYN ++  L +   +
Sbjct: 466 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 525

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLC-NDGQMDKARDLFLDMEENAVVPNVITFDM 419
             AL LFR +      P+ +TY I+  GLC   G + +A D  L+M +   +P   +F M
Sbjct: 526 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 585

Query: 420 LIRGFIRI 427
           L  G + +
Sbjct: 586 LAEGLLNL 593



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 223/445 (50%), Gaps = 7/445 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTF +L+K LC   ++  A  +  ++   G  PD  T+TTL+ G         AL +
Sbjct: 87  PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M     E G  C    VT   +I+G CK G V+ A   + Q      +P+ +TY + 
Sbjct: 147 KARML----EMG--CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 200

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C       A ++   M+ +G  P+V T+N++++ LCKNG+++EA  +L+ M+  G 
Sbjct: 201 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 260

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T+NTL+   C   R+  A +L   +   G    V++++ILIN  CK  +   AL 
Sbjct: 261 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 320

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM + G  PD V +NTL   L  + ++ +A  L  +M+  G    T TY T IDGLC
Sbjct: 321 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 380

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   I EA E+F  + +     +   +N+LIDGLCK  +++ A EL   +    L PN +
Sbjct: 381 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 440

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++   C  G + KA D+   M  N    +V+T+  LI G  +       +++L  M
Sbjct: 441 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500

Query: 441 KEINVMPDASIVSIVVD-LLAKNEI 464
           +   + P     + V+  L  +N I
Sbjct: 501 RIKGMRPTPKAYNPVLQSLFRRNNI 525



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 218/419 (52%), Gaps = 6/419 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V +  L+  L   S++    ++++++   G +PDV T+ TL+  LCR      A+ + 
Sbjct: 53  DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM++     GV   P+  T+TT++ G  +EG ++ A  +  +M +       VT   +I
Sbjct: 113 EEMSSR----GVA--PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C      +A     + +  G +P+ +T+N  ++ LC+N  +  A +++D+M+Q G  
Sbjct: 167 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD FTYN +++  C  G++  AK +   M   GC   + +++ LI   C    +E AL L
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             ++  KG+ PDV   N L   L ++     A +LF+EM+ +G   D  TY T ID LC 
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + +A++L   +    C      YN++IDGLCK  R+E A E+F  +    +  N +T
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 406

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           ++ +I GLC D ++D A +L   M    + PN IT++ ++  + +  +  K  ++L  M
Sbjct: 407 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 465



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 209/398 (52%), Gaps = 6/398 (1%)

Query: 51  VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC 110
           +FG + D   Y  L+N L   S   +  +++ EM    G  G+  +P+ VT+ T++  LC
Sbjct: 47  LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 100

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           +   V  A  +L +M  + + P+  T+T++++GF        A R+   M++ G     V
Sbjct: 101 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 160

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T NV+++  CK G++++A   +   I  G  PD  TYNT ++G C    V HA ++   M
Sbjct: 161 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 220

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G    VF+Y+I++N  CKN ++E A  + ++M+ +G  PD+   NTL   L   +++
Sbjct: 221 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 280

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E A  L  ++   GV+ D +T+   I+ LCK G    A+ LF  ++   C  D   YN+L
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ID LC  G+L  AL+L + +       + +TY+ +I GLC   ++++A ++F  M+   +
Sbjct: 341 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 400

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             N ITF+ LI G  +  +     EL+++M    + P+
Sbjct: 401 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 438



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           + +D    +   D A +L+L        I+ + V Y  ++            + ++ EM 
Sbjct: 22  SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 81

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G++P+VVTFN +M  LC+  ++  A  +L+ M   GV PD  T+ TL+ GF   G + 
Sbjct: 82  ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 141

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  +   M  MGC  T  + ++LINGYCK   +E AL    + ++ G +PD + +NT  
Sbjct: 142 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 201

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL +   V  A K+ D M + G   D +TY   ++ LCKNG + EA  + + +    C 
Sbjct: 202 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 261

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            DI  +N+LI  LC   RLE AL+L R +    + P+V T++I+I  LC  G    A  L
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 321

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F +M+ +   P+ +T++ LI     + +  K ++LL  M+           + ++D L K
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 151/452 (33%), Positives = 229/452 (50%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V+GR+  S       T+   I+GLC   R+ EA  +   L   G   DV TY TLV GLC
Sbjct: 237 VIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLC 296

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +           EEM N   EFG V  P+    + ++DGL K+G +  A +L+ ++K   
Sbjct: 297 KVEE----FEAGEEMMNEMIEFGFV--PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P++  Y ++I   C     +EA+ LF  M  +G+ PN VT+++++D  CK GK+D A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             L  M + G++   + Y++L+ G C  G++  AK LF  M + G K  V  Y+ LI+GY
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK  E+  A  LY EM  KGI P+      L  GL   +++  A KLF EM    V  + 
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I+G CK G  V A EL   +       D   Y  LI GLC +GR+  A E    
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           L       N + +S ++ G C +G++D A D   +M    V  +++ + +LI G +R  +
Sbjct: 591 LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD 650

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              +I+LL +M +  + PD  + + ++D  AK
Sbjct: 651 RRSIIDLLKQMHDQGLRPDNVLYTTMIDANAK 682



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 145/437 (33%), Positives = 229/437 (52%), Gaps = 9/437 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT++ LI   C   ++  A     K+   G +  V+ Y++L++G C+      A +L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           F+EM ANG        +PN V YT++I G CKEG +  A  L  +M  K I PN  T+T+
Sbjct: 448 FDEMIANG-------LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C+A    EA +LF EM++  V PN VT+NV+++  CK G    A  LLD M++ G
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD +TY  L+ G C TGRV+ A+E    ++    K     +S L++GYCK   ++ AL
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDAL 620

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
               EML +G+  D+V ++ L  G+           L  +M   G+  D   Y T ID  
Sbjct: 621 DACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDAN 680

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K G +  A  L+  +    C  ++  Y +LI+GLCK G ++ A  L R +     +PN 
Sbjct: 681 AKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 740

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+  +  L ++G ++KA  L  D+     + N +T+++LIRGF ++    +  E+L  
Sbjct: 741 NTYACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVN 799

Query: 440 MKEINVMPDASIVSIVV 456
           M +  + PD    S ++
Sbjct: 800 MIDSGISPDCISYSTII 816



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 206/441 (46%), Gaps = 6/441 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P     ++L+ GL  +  I  A  L  K++ FG  P +F Y  L+N +C+      A 
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +LF  M +  G F     PN VTY+ +ID  CK G +D A   L +M +  IK  V  Y+
Sbjct: 376 SLFNNMGH-KGLF-----PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYS 429

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I G C       AK LF EM+  G++PNVV +  ++   CK G++  A RL   M   
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P+ +T+  L+ G C   R+  A +LF  M          +Y++LI G+CK      A
Sbjct: 490 GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L  EM+ KG+ PD   +  L  GL    +V  A +  +++Q      +   +   + G
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHG 609

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G + +A++    +       D+  Y+ LI G+ +       ++L + +    L P+
Sbjct: 610 YCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPD 669

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ MI      G +  A  L+  M     +PNV+T+  LI G  +I    K   L  
Sbjct: 670 NVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCR 729

Query: 439 KMKEINVMPDASIVSIVVDLL 459
           +M   N +P+ +  +  +D L
Sbjct: 730 EMLASNSLPNQNTYACFLDYL 750



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 222/447 (49%), Gaps = 7/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++      LG++ +         ++SLI G C   ++  A +LF ++   G +P+V  Y
Sbjct: 404 GKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIY 463

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++G C+      A  L+ EM       G    PNT T+T +I GLC    + +A +L
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMT------GKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M + N+ PN VTY  +I G C   +   A  L  EM+++G+ P+  T+  ++  LC 
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA   ++ +     + +   ++ LL G+C  GR++ A +    M   G    +  
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVC 637

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS+LI G  + ++    + L  +M  +G++PD V++ T+     +   ++ AF L+D M 
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMV 697

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   +  TY   I+GLCK G + +A  L   +       +   Y   +D L   G +E
Sbjct: 698 SEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 757

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++L   L  G L  N VTY+I+I G C  G++ +A ++ ++M ++ + P+ I++  +I
Sbjct: 758 KAIQLHDVLLEGFLA-NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 816

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
             + R  +  + I+L   M    V PD
Sbjct: 817 YEYCRRGDLKEAIKLWESMLNRGVNPD 843



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 220/458 (48%), Gaps = 42/458 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +   ++ +   P+ V +TSLI G C E  +  A  L+ ++   G  P+ +T
Sbjct: 438 LGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T L++GLC  +    A  LF EM     E+ V+  PN VTY  +I+G CKEG   +A E
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMV----EWNVI--PNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M +K + P+  TY  +I G C     +EA+    ++  +  + N + F+ ++   C
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYC 611

Query: 181 KNGKMDEA--------------------------------SRLLDLMIQ---HGVRPDAF 205
           K G++D+A                                  ++DL+ Q    G+RPD  
Sbjct: 612 KEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV 671

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            Y T++D     G +  A  L+  M S GC   V +Y+ LING CK   ++ A  L  EM
Sbjct: 672 LYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 731

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L+    P+   +      L     +E+A +L D +   G  A+T TY   I G CK G I
Sbjct: 732 LASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRI 790

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA E+   +       D  +Y+++I   C+ G L+ A++L+ S+    + P+ V Y+ +
Sbjct: 791 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFL 850

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           I G C  G++ KA +L  DM    V PN  T++ LI G
Sbjct: 851 IYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 213/433 (49%), Gaps = 6/433 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           + C     + F  LI+      R ++   +   +   G  P + T + ++NGL R     
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           +AL+LF+E+ +          P+   YT ++  LC+     +A+E++ +M+      +V 
Sbjct: 198 MALHLFDEIVSSG------LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY   IRG C  +   EA  +   +  +G++ +V T+  ++  LCK  + +    +++ M
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           I+ G  P     + L+DG    G +  A +L   ++  G   ++F Y+ LIN  CK+ ++
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A SL++ M  KG+ P+ V ++ L     +  +++ A     +M   G+ A  + Y + 
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I G CK G +  A  LF  +     + ++  Y SLI G CK G L  A  L+  +    +
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN  T++ +I GLC+  +M +A  LF +M E  V+PN +T+++LI G  +     +  E
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 436 LLHKMKEINVMPD 448
           LL +M E  ++PD
Sbjct: 552 LLDEMVEKGLVPD 564



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 178/361 (49%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P   T + +++GL +      A  L  ++    ++P+V  YT+V+R  C  KD+  A+ +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M   G   +V T+NV +  LCKN ++ EA  + +L+   G+R D  TY TL+ G C 
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
                  +E+   M   G   +  + S L++G  K   I  A  L +++   G+ P + +
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L   + +  +++ A  LF+ M   G+  +  TY   ID  CK G +  A+     + 
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
            +  +  +  Y+SLI G CK G+L  A  LF  +    L PNVV Y+ +I G C +G++ 
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L+ +M    + PN  TF  LI G    N  ++  +L  +M E NV+P+    ++++
Sbjct: 478 NAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLI 537

Query: 457 D 457
           +
Sbjct: 538 E 538



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 164/348 (47%), Gaps = 30/348 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     F +L  +++    PD  T+  LI GLC+  R+ EA      L+    + +   +
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCF 603

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC-------------------------- 95
           + L++G C+      AL+   EM        +VC                          
Sbjct: 604 SALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHD 663

Query: 96  ---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P+ V YTT+ID   K G +  A  L   M  +   PNVVTYT++I G C     ++
Sbjct: 664 QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+ L  EM+     PN  T+   +D L   G +++A +L D++++ G   +  TYN L+ 
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIR 782

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           GFC  GR+  A E+ V+M   G      SYS +I  YC+  +++ A+ L+  ML++G+ P
Sbjct: 783 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 842

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           D V +N L  G     ++ +AF+L D+M R GV  +  TY + I G C
Sbjct: 843 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 160/342 (46%), Gaps = 36/342 (10%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           MMD G+ P + T + +++ L +  +   A  L D ++  G+RPD + Y  ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
              A+E+   MES GC  +V +Y++ I G CKN+ +  A+ + + +  KG++ DV  + T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L +GL ++ + E   ++ +EM   G           +DGL K G I  A +L + ++   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD--- 396
               +  YN+LI+ +CK G+L+ A  LF ++    L PN VTYSI+I   C  G++D   
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 397 --------------------------------KARDLFLDMEENAVVPNVITFDMLIRGF 424
                                            A+ LF +M  N + PNV+ +  LI G+
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 425 IRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEIS 465
            +  E      L H+M    + P+  +  +++  L   N ++
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 116/233 (49%), Gaps = 28/233 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V +T++I        +  A  L+  +   GC P+V TYT L+NGLC+      A  L
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELL 727

Query: 81  FEEM--------------------ANGNGEFGVVCE--------PNTVTYTTIIDGLCKE 112
             EM                    + GN E  +            NTVTY  +I G CK 
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKL 787

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G + +A E+L+ M D  I P+ ++Y+++I  +C   D  EA +L+  M+++GV P+ V +
Sbjct: 788 GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAY 847

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           N ++   C  G++ +A  L D M++ GV+P+  TYN+L+ G CL   V+   +
Sbjct: 848 NFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 232/450 (51%), Gaps = 7/450 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  R+L+   +   VT   LI G C   R+ +A     +    G EPD  TY
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T VNGLC+  H   AL + + M     +      P+  TY  +++ LCK G +++AK +
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM D+   P++ T+ ++I   C      EA  L  ++  +GV P+V TFN++++ LCK
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A RL + M   G  PD  TYNTL+D  C  G++  A +L   MES GC  +  +
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G CK   IE A  ++ +M  +GI  + +  NTL  GL +  +++ AF+L ++M 
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY + +   CK G I +A ++  T+     E D+  Y +LI+GLCK+GR +
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL++ R +    + P    Y+ ++  L     +  A  LF +M E    P+ +T+ ++ 
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643

Query: 422 RGFIRINEPSK-VIELLHKMKEINVMPDAS 450
           RG  R   P K   + + +M +   +P+ S
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 221/428 (51%), Gaps = 7/428 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV      + + +   F PD +T+ + + GLC    +  A  +   +   G +PDVFT
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +VN LC+      A  +  +M +        C P+  T+ T+I  LC    +++A +
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTGNRLEEALD 377

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  Q+  K + P+V T+  +I   C   D + A RLF EM + G  P+ VT+N ++D LC
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GK+ +A  LL  M   G      TYNT++DG C   R+  A+E+F  M+  G      
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LI+G CK+K+I+ A  L ++M+S+G++P+ + +N++     +   +++A  + + M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D  TY T I+GLCK G    A+++   +RI       +AYN ++  L +   +
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLC-NDGQMDKARDLFLDMEENAVVPNVITFDM 419
             AL LFR +      P+ +TY I+  GLC   G + +A D  L+M +   +P   +F M
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677

Query: 420 LIRGFIRI 427
           L  G + +
Sbjct: 678 LAEGLLNL 685



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 223/445 (50%), Gaps = 7/445 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTF +L+K LC   ++  A  +  ++   G  PD  T+TTL+ G         AL +
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M     E G  C    VT   +I+G CK G V+ A   + Q      +P+ +TY + 
Sbjct: 239 KARML----EMG--CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 292

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C       A ++   M+ +G  P+V T+N++++ LCKNG+++EA  +L+ M+  G 
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T+NTL+   C   R+  A +L   +   G    V++++ILIN  CK  +   AL 
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM + G  PD V +NTL   L  + ++ +A  L  +M+  G    T TY T IDGLC
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   I EA E+F  + +     +   +N+LIDGLCK  +++ A EL   +    L PN +
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++   C  G + KA D+   M  N    +V+T+  LI G  +       +++L  M
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592

Query: 441 KEINVMPDASIVSIVVD-LLAKNEI 464
           +   + P     + V+  L  +N I
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNI 617



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 218/419 (52%), Gaps = 6/419 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V +  L+  L   S++    ++++++   G +PDV T+ TL+  LCR      A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIML 204

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM++     GV   P+  T+TT++ G  +EG ++ A  +  +M +       VT   +I
Sbjct: 205 EEMSS----RGVA--PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C      +A     + +  G +P+ +T+N  ++ LC+N  +  A +++D+M+Q G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD FTYN +++  C  G++  AK +   M   GC   + +++ LI   C    +E AL L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             ++  KG+ PDV   N L   L ++     A +LF+EM+ +G   D  TY T ID LC 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + +A++L   +    C      YN++IDGLCK  R+E A E+F  +    +  N +T
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           ++ +I GLC D ++D A +L   M    + PN IT++ ++  + +  +  K  ++L  M
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 209/398 (52%), Gaps = 6/398 (1%)

Query: 51  VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC 110
           +FG + D   Y  L+N L   S   +  +++ EM    G  G+  +P+ VT+ T++  LC
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 192

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           +   V  A  +L +M  + + P+  T+T++++GF        A R+   M++ G     V
Sbjct: 193 RAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T NV+++  CK G++++A   +   I  G  PD  TYNT ++G C    V HA ++   M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G    VF+Y+I++N  CKN ++E A  + ++M+ +G  PD+   NTL   L   +++
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E A  L  ++   GV+ D +T+   I+ LCK G    A+ LF  ++   C  D   YN+L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ID LC  G+L  AL+L + +       + +TY+ +I GLC   ++++A ++F  M+   +
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             N ITF+ LI G  +  +     EL+++M    + P+
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           + +D    +   D A +L+L        I+ + V Y  ++            + ++ EM 
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G++P+VVTFN +M  LC+  ++  A  +L+ M   GV PD  T+ TL+ GF   G + 
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  +   M  MGC  T  + ++LINGYCK   +E AL    + ++ G +PD + +NT  
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL +   V  A K+ D M + G   D +TY   ++ LCKNG + EA  + + +    C 
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            DI  +N+LI  LC   RLE AL+L R +    + P+V T++I+I  LC  G    A  L
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F +M+ +   P+ +T++ LI     + +  K ++LL  M+           + ++D L K
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 232/450 (51%), Gaps = 7/450 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  R+L+   +   VT   LI G C   R+ +A     +    G EPD  TY
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T VNGLC+  H   AL + + M     +      P+  TY  +++ LCK G +++AK +
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM D+   P++ T+ ++I   C      EA  L  ++  +GV P+V TFN++++ LCK
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A RL + M   G  PD  TYNTL+D  C  G++  A +L   MES GC  +  +
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G CK   IE A  ++ +M  +GI  + +  NTL  GL +  +++ AF+L ++M 
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY + +   CK G I +A ++  T+     E D+  Y +LI+GLCK+GR +
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL++ R +    + P    Y+ ++  L     +  A  LF +M E    P+ +T+ ++ 
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643

Query: 422 RGFIRINEPSK-VIELLHKMKEINVMPDAS 450
           RG  R   P K   + + +M +   +P+ S
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 221/428 (51%), Gaps = 7/428 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV      + + +   F PD +T+ + + GLC    +  A  +   +   G +PDVFT
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +VN LC+      A  +  +M +        C P+  T+ T+I  LC    +++A +
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTGNRLEEALD 377

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  Q+  K + P+V T+  +I   C   D + A RLF EM + G  P+ VT+N ++D LC
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GK+ +A  LL  M   G      TYNT++DG C   R+  A+E+F  M+  G      
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LI+G CK+K+I+ A  L ++M+S+G++P+ + +N++     +   +++A  + + M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D  TY T I+GLCK G    A+++   +RI       +AYN ++  L +   +
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLC-NDGQMDKARDLFLDMEENAVVPNVITFDM 419
             AL LFR +      P+ +TY I+  GLC   G + +A D  L+M +   +P   +F M
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677

Query: 420 LIRGFIRI 427
           L  G + +
Sbjct: 678 LAEGLLNL 685



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 223/445 (50%), Gaps = 7/445 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTF +L+K LC   ++  A  +  ++   G  PD  T+TTL+ G         AL +
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M     E G  C    VT   +I+G CK G V+ A   + Q      +P+ +TY + 
Sbjct: 239 KARML----EMG--CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 292

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C       A ++   M+ +G  P+V T+N++++ LCKNG+++EA  +L+ M+  G 
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T+NTL+   C   R+  A +L   +   G    V++++ILIN  CK  +   AL 
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM + G  PD V +NTL   L  + ++ +A  L  +M+  G    T TY T IDGLC
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   I EA E+F  + +     +   +N+LIDGLCK  +++ A EL   +    L PN +
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++   C  G + KA D+   M  N    +V+T+  LI G  +       +++L  M
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592

Query: 441 KEINVMPDASIVSIVVD-LLAKNEI 464
           +   + P     + V+  L  +N I
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNI 617



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 218/419 (52%), Gaps = 6/419 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V +  L+  L   S++    ++++++   G +PDV T+ TL+  LCR      A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM++     GV   P+  T+TT++ G  +EG ++ A  +  +M +       VT   +I
Sbjct: 205 EEMSS----RGVA--PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C      +A     + +  G +P+ +T+N  ++ LC+N  +  A +++D+M+Q G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD FTYN +++  C  G++  AK +   M   GC   + +++ LI   C    +E AL L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             ++  KG+ PDV   N L   L ++     A +LF+EM+ +G   D  TY T ID LC 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + +A++L   +    C      YN++IDGLCK  R+E A E+F  +    +  N +T
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           ++ +I GLC D ++D A +L   M    + PN IT++ ++  + +  +  K  ++L  M
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 209/398 (52%), Gaps = 6/398 (1%)

Query: 51  VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC 110
           +FG + D   Y  L+N L   S   +  +++ EM    G  G+  +P+ VT+ T++  LC
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 192

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           +   V  A  +L +M  + + P+  T+T++++GF        A R+   M++ G     V
Sbjct: 193 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T NV+++  CK G++++A   +   I  G  PD  TYNT ++G C    V HA ++   M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G    VF+Y+I++N  CKN ++E A  + ++M+ +G  PD+   NTL   L   +++
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E A  L  ++   GV+ D +T+   I+ LCK G    A+ LF  ++   C  D   YN+L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ID LC  G+L  AL+L + +       + +TY+ +I GLC   ++++A ++F  M+   +
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             N ITF+ LI G  +  +     EL+++M    + P+
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           + +D    +   D A +L+L        I+ + V Y  ++            + ++ EM 
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G++P+VVTFN +M  LC+  ++  A  +L+ M   GV PD  T+ TL+ GF   G + 
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  +   M  MGC  T  + ++LINGYCK   +E AL    + ++ G +PD + +NT  
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL +   V  A K+ D M + G   D +TY   ++ LCKNG + EA  + + +    C 
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            DI  +N+LI  LC   RLE AL+L R +    + P+V T++I+I  LC  G    A  L
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F +M+ +   P+ +T++ LI     + +  K ++LL  M+           + ++D L K
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 145/437 (33%), Positives = 231/437 (52%), Gaps = 7/437 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+AV +T+LIKG   E R  EA  +   +   G +PDV  Y +++ GLC++     A + 
Sbjct: 479 PNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDY 538

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM     E G+  +PN  TY  +I G CK G +  A     +M    I PN V  T++
Sbjct: 539 LVEMI----ERGL--KPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTAL 592

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C      EA  +F  M+ + V P+V T++ ++  L +NGK+  A  LL   ++ G+
Sbjct: 593 IDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGL 652

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD FTYN+++ GFC  G +  A +L   M   G    + +Y+ LING CK  EIE A  
Sbjct: 653 VPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARE 712

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+  +  KG+  + V + T+  G  +   + +AF+LFDEM   GV  D++ Y   IDG  
Sbjct: 713 LFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCR 772

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G   +A+ LF    + K      + N+L+DG CKSG++  A +L   +    + P+ V
Sbjct: 773 KEGNTEKALSLFLE-SVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHV 831

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I+I   C  G + +A   F+DM++  ++PN +T+  L+ G+      S++  L  +M
Sbjct: 832 TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM 891

Query: 441 KEINVMPDASIVSIVVD 457
              ++ PD    S+++D
Sbjct: 892 IAKDIEPDGVTWSVMID 908



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 238/462 (51%), Gaps = 7/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +L  + K    PD + + S+I GLC   ++ EA     ++   G +P+V+TY
Sbjct: 495 GRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTY 554

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C++    VA   F+EM       G    PN V  T +IDG CKEG   +A  +
Sbjct: 555 GALIHGYCKSGEMQVADRYFKEM------LGCGIAPNDVVCTALIDGYCKEGSTTEATSI 608

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  +++ P+V TY+++I G         A  L  E +++G+ P+V T+N I+   CK
Sbjct: 609 FRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCK 668

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A +L + M Q G+ P+  TYN L++G C  G +  A+ELF  +   G  H   +
Sbjct: 669 QGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVT 728

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+GYCK+  +  A  L+ EM  KG+ PD  +++ L  G  +    E+A  LF E  
Sbjct: 729 YATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESV 788

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G A+ T +    +DG CK+G ++EA +L   +     + D   Y  LID  CK+G L+
Sbjct: 789 QKGFAS-TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLK 847

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A + F  +    L+PN +TY+ ++ G    G+  +   LF +M    + P+ +T+ ++I
Sbjct: 848 EAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMI 907

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
              ++  +  K ++L+  M +       ++  +++D L + E
Sbjct: 908 DAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKE 949



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 227/455 (49%), Gaps = 6/455 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R +   ++L  +      P  V +T+LI G   +    EA  +  ++   G + ++FTY 
Sbjct: 321 RCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYN 380

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LV G+C+      A  L  EM        V  +P+T TY  +I+G  KE    + K+LL
Sbjct: 381 ALVKGVCKFGDMEKADALLNEM------IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLL 434

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +MK  N+ P   T   +I G C      +A R+F  M+  GV+PN V +  ++    + 
Sbjct: 435 SEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQE 494

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+  EA R+L +M + GV+PD   YN+++ G C + ++  AK+  V M   G K  V++Y
Sbjct: 495 GRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTY 554

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
             LI+GYCK+ E++ A   + EML  GI P+ V+   L  G  +      A  +F  M  
Sbjct: 555 GALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLG 614

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             V  D  TY   I GL +NG +  A+EL           D+  YNS+I G CK G +  
Sbjct: 615 RSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGK 674

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A +L   +    + PN++TY+ +I GLC  G++++AR+LF  +    +  N +T+  +I 
Sbjct: 675 AFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIID 734

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           G+ +    SK   L  +M    V PD+ + S ++D
Sbjct: 735 GYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALID 769



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 233/462 (50%), Gaps = 8/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F +   + K     D  T++ LI G   + R  EA  +  ++   G +P    Y
Sbjct: 285 GEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           T L++G  R   +  A  + EEM A G        + N  TY  ++ G+CK G ++KA  
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARG-------VKLNLFTYNALVKGVCKFGDMEKADA 397

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M    IKP+  TY ++I G+   ++ +  K L  EM    + P   T  +I++ LC
Sbjct: 398 LLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLC 457

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           ++G +++ASR+ ++M+  GV+P+A  Y TL+ G    GR   A  +   M+  G +  V 
Sbjct: 458 RHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVL 517

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ +I G CK++++E A     EM+ +G+KP+V  +  L  G  +  +++ A + F EM
Sbjct: 518 CYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM 577

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+A +       IDG CK G   EA  +F  +       D+R Y++LI GL ++G+L
Sbjct: 578 LGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A+EL        LVP+V TY+ +I G C  G + KA  L   M +  + PN+IT++ L
Sbjct: 638 QGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNAL 697

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           I G  +  E  +  EL   +    +  +A   + ++D   K+
Sbjct: 698 INGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKS 739



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 238/465 (51%), Gaps = 13/465 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L++    D  T+T LI          E   L  ++   GC P + TY  ++ GLCR   
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  L + M       G+V +    TY+ +IDG  K+    +AK +L +M  K +KP 
Sbjct: 287 VDEAFELKKLMDKK----GLVAD--VFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPG 340

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            V YT++I GF    D  EA R+  EM+ +GV+ N+ T+N ++  +CK G M++A  LL+
Sbjct: 341 HVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLN 400

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            MI  G++PD  TYN +++G+      +  K+L   M+      T ++  ++ING C++ 
Sbjct: 401 EMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHG 460

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            IE A  ++  M+S G+KP+ VI+ TL  G  +  + + A ++   M + GV  D   Y 
Sbjct: 461 SIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYN 520

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LPC 372
           + I GLCK+  + EA +    +     + ++  Y +LI G CKSG +++A   F+  L C
Sbjct: 521 SVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGC 580

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
           G+  PN V  + +I G C +G   +A  +F  M   +V P+V T+  LI G +R  +   
Sbjct: 581 GI-APNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQG 639

Query: 433 VIELLHKMKEINVMPDA-SIVSIVVDLLAKNEISLNSLPSFTVHE 476
            +ELL +  E  ++PD  +  SI+     +  I      +F +HE
Sbjct: 640 AMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIG----KAFQLHE 680



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 188/392 (47%), Gaps = 40/392 (10%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD  T+++LI GL    ++  A  L ++    G  PDVFTY ++++G C+      A  L
Sbjct: 619  PDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQL 678

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             E M     + G+   PN +TY  +I+GLCK G +++A+EL   +  K +  N VTY ++
Sbjct: 679  HEYMC----QKGI--SPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF---------------------------- 172
            I G+C + + ++A RLF EM  +GV P+   +                            
Sbjct: 733  IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF 792

Query: 173  ------NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
                  N +MD  CK+GK+ EA++LL+ M+   V+PD  TY  L+D  C TG +  A++ 
Sbjct: 793  ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQF 852

Query: 227  FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
            FV M+         +Y+ L++GY          +L+ EM++K I+PD V  + +     +
Sbjct: 853  FVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLK 912

Query: 287  IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                 +  KL D+M + G           ID LC+  ++ E +++   +        +  
Sbjct: 913  EGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLAT 972

Query: 347  YNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             ++L+    K+G+++ A  + +S+     VP+
Sbjct: 973  CSTLVRCFHKAGKMDGAARVLKSMVRFKWVPD 1004



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 169/363 (46%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           V +  +IDG  K+G  D+A    L  K       ++    ++     A       R +  
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M++  V  +V T+  +++   + G   E  RLL  M + G  P   TYN ++ G C  G 
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           V+ A EL   M+  G    VF+YSILI+G+ K K    A  +  EM SKG+KP  V +  
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G         AF++ +EM   GV  + +TY   + G+CK G + +A  L + + ++ 
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + D + YN++I+G  K        +L   +    LVP   T  ++I GLC  G ++ A 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +F  M    V PN + +  LI+G ++     + + +L  M +  V PD    + V+  L
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 460 AKN 462
            K+
Sbjct: 527 CKS 529



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 166/385 (43%), Gaps = 40/385 (10%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G++     +L   L+    PD  T+ S+I G C +  I +A  L   +   G  P++ TY
Sbjct: 635  GKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITY 694

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              L+NGLC+      A  LF+      G  G     N VTY TIIDG CK G + KA  L
Sbjct: 695  NALINGLCKAGEIERARELFD------GIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRL 748

Query: 122  LLQMKDKNIKPNVVTYTSVIRG----------------------------------FCYA 147
              +M  K + P+   Y+++I G                                  FC +
Sbjct: 749  FDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKS 808

Query: 148  KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                EA +L  +M+D+ V+P+ VT+ +++D  CK G + EA +    M +  + P+A TY
Sbjct: 809  GKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTY 868

Query: 208  NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
              LL G+ + GR +    LF  M +   +    ++S++I+ + K  +    L L  +ML 
Sbjct: 869  TALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLK 928

Query: 268  KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            KG      + + L   L     V    K+ ++++  G+     T  T +    K G +  
Sbjct: 929  KGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDG 988

Query: 328  AVELFHTLRILKCEFDIRAYNSLID 352
            A  +  ++   K   D    N LI+
Sbjct: 989  AARVLKSMVRFKWVPDSTELNDLIN 1013



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 11/253 (4%)

Query: 216 LTGRVNHAKEL-----FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           +T +VN  K L     +V  + MG    + S+SIL    C ++    A S+ ++M+    
Sbjct: 74  ITKQVNDPKRLLDFFNWVQFQ-MGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSS 132

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
                I ++L     E                 GV      +   IDG  K G   EAV 
Sbjct: 133 GGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGV-----VFELLIDGYKKKGLFDEAVS 187

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
            F   +       +   N L+  L K+ +LE+    +  +    ++ +V TY+ +I    
Sbjct: 188 FFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHF 247

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             G   + + L  +MEE    P+++T++++I G  R  E  +  EL   M +  ++ D  
Sbjct: 248 RAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVF 307

Query: 451 IVSIVVDLLAKNE 463
             SI++D   K +
Sbjct: 308 TYSILIDGFGKQK 320


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 237/454 (52%), Gaps = 10/454 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P++VTF +L+ G   + R  +   L   +     +P+V +Y  L+ GLC+      A  L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M +  G       P+ VTY+T++ G CK G V++++ELL ++  + ++P+ + YT V
Sbjct: 68  VRDMISRGGRS----TPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKV 123

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C +    EA  L  EM+  G  P ++TFN ++   C+   ++ A  LL  M   GV
Sbjct: 124 VASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGV 183

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + D  TYNTL+DG C  GR+  A++L   M++ GC   V +YS  + G CK+ ++  A  
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQ 243

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYRTFIDGL 319
           +  +M      P+VV +NT+  GL +  +++ A ++ ++M   +G   +   Y T +DGL
Sbjct: 244 VLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGL 303

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G   EA  +   +    C  D+  Y+SL++GLCK+G++E A+E  R +      PN 
Sbjct: 304 CKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVV-----PNVITFDMLIRGFIRINEPSKVI 434
           VTY  ++ GLC+ G++ +A  +  +M           P+V T++ LI G  +       +
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDAL 423

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           +   +M+     PD    S +V+ LA++  +L +
Sbjct: 424 KFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 212/361 (58%), Gaps = 9/361 (2%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C PN+VT+  +++G  K+G     + LL  M  ++I+PNVV+Y  ++ G C  + W+EA+
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 155 RLFIEMMDQGVQ--PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
            L  +M+ +G +  P++VT++ ++   CK GK++E+  LL  +I  G+RPDA  Y  ++ 
Sbjct: 66  ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVA 125

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C + R+  A EL   M   GC  T+ +++ LI+G C+ K +E A SL  +M + G+K 
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKA 185

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           DVV +NTL  GL +  +++ A +L + M+ +G A D   Y +F+ GLCK+G +++A ++ 
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVL 245

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVLVPNVVTYSIMIGG 388
             +R    + ++  YN+++DGLCKSG+++ ALE+   +     CG+   NVV YS ++ G
Sbjct: 246 EQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL---NVVGYSTVVDG 302

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC  G+  +AR +   M      P+V+T+  L+ G  +  +  + +E + +M      P+
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362

Query: 449 A 449
           A
Sbjct: 363 A 363



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 205/385 (53%), Gaps = 12/385 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TPD VT+++L+ G C   ++ E+  L  ++   G  PD   YT +V  LC+++    AL 
Sbjct: 79  TPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALE 138

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L EEM          C P  +T+ T+I G C+E  ++ A  LL +M    +K +VVTY +
Sbjct: 139 LLEEMIRAG------CCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNT 192

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G C A    EA++L   M   G  P+VV ++  +  LCK+GK+ +A ++L+ M    
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSH 252

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM-GCKHTVFSYSILINGYCKNKEIEGA 258
             P+  TYNT+LDG C +G+++ A E+   M S  GC   V  YS +++G CK    + A
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            S+   M   G +PDVV +++L  GL +  ++E A +   EM   G   +  TY + + G
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372

Query: 319 LCKNGYIVEAVELFHTL-----RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           LC  G + EA  +   +         C   +  YN+LI GLCK+GR++ AL+ F+ +   
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKA 398
              P+ V+YS ++ GL   G+  +A
Sbjct: 433 GCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 203/364 (55%), Gaps = 12/364 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  ++     PDA+ +T ++  LC  +R+ EA  L  ++   GC P + T+
Sbjct: 96  GKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITF 155

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G CR  +  +A +L ++MA      GV  + + VTY T++DGLCK G + +A++L
Sbjct: 156 NTLISGCCREKNLEMADSLLQKMAAS----GV--KADVVTYNTLMDGLCKAGRLQEAEQL 209

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK     P+VV Y+S + G C +    +A ++  +M D    PNVVT+N I+D LCK
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269

Query: 182 NGKMDEASRLLDLMIQH-GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +GK+D A  +++ M    G   +   Y+T++DG C  GR   A+ +  +M   GC+  V 
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS L+NG CK  +IE A+    EM  +G KP+ V + +L  GL    ++  A ++ +EM
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389

Query: 301 -----QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
                  +       TY   I GLCK G I +A++ F  +R   C+ D  +Y+++++GL 
Sbjct: 390 SSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLA 449

Query: 356 KSGR 359
           +SGR
Sbjct: 450 RSGR 453



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 173/334 (51%), Gaps = 22/334 (6%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++++   P  +TF +LI G C E  +  A +L  K+   G + DV TY TL++GLC+   
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGR 202

Query: 74  TIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
              A  L E M A+G       C P+ V Y++ + GLCK G V  A ++L QM+D +  P
Sbjct: 203 LQEAEQLLERMKASG-------CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDP 255

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-----GVQPNVVTFNVIMDELCKNGKMDE 187
           NVVTY +++ G C +   + A    +EMM+Q     G   NVV ++ ++D LCK G+  E
Sbjct: 256 NVVTYNTILDGLCKSGKIDTA----LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  +++ M + G RPD  TY++L++G C  G++  A E    M   GCK    +Y  L++
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 248 GYCKNKEIEGALSLYSEM-----LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           G C    +  A  +  EM           P V  +N L  GL +  +++ A K F  M+ 
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            G   D  +Y T ++GL ++G  ++A  +   +R
Sbjct: 432 QGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 168/340 (49%), Gaps = 39/340 (11%)

Query: 161 MDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           MD+ G  PN VTFN +++   K G+  +  RLL+ M    ++P+  +YN LL+G C   R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 220 VNHAKELFVSMESMGCKHT--VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
            + A+EL   M S G + T  + +YS L++GYCK  ++E +  L  E++S+G++PD +++
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 278 -----------------------------------NTLFVGLFEIHQVERAFKLFDEMQR 302
                                              NTL  G      +E A  L  +M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV AD  TY T +DGLCK G + EA +L   ++   C  D+ AY+S + GLCKSG++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDMLI 421
           A ++   +      PNVVTY+ ++ GLC  G++D A ++   M   +    NV+ +  ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G  ++    +   ++  M      PD    S +V+ L K
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCK 340



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 145/269 (53%), Gaps = 10/269 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L R+  S   PD V ++S + GLC   ++++A  +  ++R    +P+V TY
Sbjct: 201 GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTY 260

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++GLC++     AL + E+MA+ +G     C  N V Y+T++DGLCK G   +A+ +
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDG-----CGLNVVGYSTVVDGLCKLGRTQEARSV 315

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M     +P+VVTY+S++ G C A    EA     EM  +G +PN VT+  ++  LC 
Sbjct: 316 MEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCS 375

Query: 182 NGKMDEASRLLDLMIQHGVR-----PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
            G++ EA R+++ M   G       P   TYN L+ G C  GR++ A + F  M S GC 
Sbjct: 376 CGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCD 435

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEM 265
               SYS ++ G  ++     A  + SE+
Sbjct: 436 PDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 139/270 (51%), Gaps = 2/270 (0%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M + G  P++ T+N L++GF   GR    + L  +M +   +  V SY+ L+ G CK + 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 255 IEGALSLYSEMLSKGIK--PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
              A  L  +M+S+G +  PD+V ++TL  G  +  +VE + +L  E+   G+  D   Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              +  LCK+  + EA+EL   +    C   +  +N+LI G C+   LE+A  L + +  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             +  +VVTY+ ++ GLC  G++ +A  L   M+ +   P+V+ +   + G  +  +   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             ++L +M++ +  P+    + ++D L K+
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKS 270



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 1/160 (0%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      V+  + ++   PD VT++SL+ GLC   +I EA     ++ + GC+P+  T
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVT 365

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +LV+GLC       A  + EEM++  G  G  C P+  TY  +I GLCK G +D A +
Sbjct: 366 YCSLVHGLCSCGRLAEAERMVEEMSS-GGGGGHHCPPSVSTYNALIGGLCKAGRIDDALK 424

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
              +M+ +   P+ V+Y++++ G   +    +A+ +  E+
Sbjct: 425 FFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 132/412 (32%), Positives = 223/412 (54%), Gaps = 6/412 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   +++S  +P+  T+  LI+G C+   + +    F ++   GC P+V TY TL++  C
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  L + M++         +PN ++Y  II+GLC+EG + +A E+L +M  K 
Sbjct: 261 KMGRIDEAFGLLKSMSSKG------MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+ VTY +++ G+C   ++++A  +  EM+  GV P+VVT+  +++ +CK   ++ A 
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
              D M   G+RP+  TY TL+DGF   G +N A  +   M   G   +V +Y+  I+G+
Sbjct: 375 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 434

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C  + +E AL +  EM+ KG+ PDVV ++T+  G     +++RAF++  EM   GV+ D 
Sbjct: 435 CVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDA 494

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + I GLC+   + EA +L   +  +    D   Y +LI+  C  G L  AL L   
Sbjct: 495 VTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE 554

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +     +P+ VTYS++I GL    +  +A+ L   +     VP+ +T+D LI
Sbjct: 555 MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 227/476 (47%), Gaps = 21/476 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +  G    G + ++   P+ VT+ +LI   C   RI EA  L   +   G +P++ +
Sbjct: 227 VGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS 286

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  ++NGLCR      A  + EEM    G  G    P+ VTY T+++G CKEG   +A  
Sbjct: 287 YNVIINGLCREGSMKEAWEILEEM----GYKGFT--PDEVTYNTLLNGYCKEGNFHQALV 340

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M    + P+VVTYT++I   C A++ N A   F +M  +G++PN  T+  ++D   
Sbjct: 341 IHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFS 400

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G ++EA R+L+ M + G  P   TYN  + G C+  R+  A  +   M   G    V 
Sbjct: 401 RQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVV 460

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYS +I+G+C+  E++ A  +  EM+ KG+ PD V +++L  GL E+ ++  A  L  EM
Sbjct: 461 SYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM 520

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D +TY T I+  C  G + +A+ L   +       D   Y+ LI+GL K  R 
Sbjct: 521 LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 580

Query: 361 EIALELFRSLPCGVLVPNVVTYSI---------------MIGGLCNDGQMDKARDLFLDM 405
             A  L   L     VP+ VTY                 +I G C  G M +A  +F  M
Sbjct: 581 REAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM 640

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            E    P    ++++I G  R     K   L  +M     +P    V  ++  L K
Sbjct: 641 VERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 696



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 193/363 (53%), Gaps = 2/363 (0%)

Query: 97  PNTVTYTTIIDGLCK-EGFVD-KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           P  ++Y +++D + +  G V   A+E+  +M    + PNV TY  +IRGFC   +  +  
Sbjct: 175 PGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGL 234

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
             F EM   G  PNVVT+N ++D  CK G++DEA  LL  M   G++P+  +YN +++G 
Sbjct: 235 GCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGL 294

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G +  A E+   M   G      +Y+ L+NGYCK      AL +++EM+  G+ P V
Sbjct: 295 CREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSV 354

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +  L   + +   + RA + FD+M+  G+  +  TY T IDG  + G + EA  + + 
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 414

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +        +  YN+ I G C   R+E AL + + +    L P+VV+YS +I G C  G+
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D+A  +  +M E  V P+ +T+  LI+G   +   ++  +L  +M ++ + PD    + 
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 534

Query: 455 VVD 457
           +++
Sbjct: 535 LIN 537



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 221/446 (49%), Gaps = 8/446 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI--V 76
           +   +  F  ++K     + I +A       +  G  P V +Y ++++ + R+  ++   
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS 197

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A  ++ EM            PN  TY  +I G C  G + K      +M+     PNVVT
Sbjct: 198 AEEVYREMIRSR------VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVT 251

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y ++I  +C     +EA  L   M  +G+QPN++++NVI++ LC+ G M EA  +L+ M 
Sbjct: 252 YNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMG 311

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G  PD  TYNTLL+G+C  G  + A  +   M   G   +V +Y+ LIN  CK + + 
Sbjct: 312 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 371

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+  + +M  +G++P+   + TL  G      +  A+++ +EM  +G +    TY  FI
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            G C    + EA+ +   +       D+ +Y+++I G C+ G L+ A ++ + +    + 
Sbjct: 432 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+ VTYS +I GLC   ++ +A DL  +M +  + P+  T+  LI  +    + +K + L
Sbjct: 492 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 551

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
             +M     +PDA   S++++ L K 
Sbjct: 552 HDEMIHKGFLPDAVTYSVLINGLNKQ 577



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 23/288 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +   +++   +PDAVT++SLI+GLC   R+ EA  L  ++   G  PD FTY
Sbjct: 473 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 532

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL+N  C       AL+L +EM +     G +  P+ VTY+ +I+GL K+    +AK L
Sbjct: 533 TTLINAYCVEGDLNKALHLHDEMIHK----GFL--PDAVTYSVLINGLNKQARTREAKRL 586

Query: 122 LLQMKDKNIKPNVVTY---------------TSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           L ++  +   P+ VTY                ++I+GFC     +EA R+F  M+++  +
Sbjct: 587 LFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHK 646

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P    +NVI+   C+ G + +A  L   MI  G  P   T  TL+      G      E+
Sbjct: 647 PGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEV 706

Query: 227 FV-SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
              ++ S        +  +L+    K   +E  L++ ++M   G+ P+
Sbjct: 707 IGDTLRSCRLNEAELA-KVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 231/450 (51%), Gaps = 7/450 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  R+L+   +   VT   LI G C   R+ +A     +    G EPD  TY
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T VNGLC+  H   AL + + M     +      P+  TY  +++ LCK G +++AK +
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM D+   P++ T+ ++I   C      EA  L  ++  +GV P+V TFN++++ LCK
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A RL + M   G  PD  TYNTL+D  C  G++  A +L   MES GC  +  +
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G CK   IE A  ++ +M  +GI  + +  NTL  GL +  +++ AF L ++M 
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMI 523

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY + +   CK G I +A ++  T+     E D+  Y +LI+GLCK+GR +
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL++ R +    + P    Y+ ++  L     +  A  LF +M E    P+ +T+ ++ 
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643

Query: 422 RGFIRINEPSK-VIELLHKMKEINVMPDAS 450
           RG  R   P K   + + +M +   +P+ S
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673



 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 221/428 (51%), Gaps = 7/428 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV      + + +   F PD +T+ + + GLC    +  A  +   +   G +PDVFT
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +VN LC+      A  +  +M +        C P+  T+ T+I  LC    +++A +
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTGNRLEEALD 377

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  Q+  K + P+V T+  +I   C   D + A RLF EM + G  P+ VT+N ++D LC
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GK+ +A  LL  M   G      TYNT++DG C   R+  A+E+F  M+  G      
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LI+G CK+K+I+ A  L ++M+S+G++P+ + +N++     +   +++A  + + M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D  TY T I+GLCK G    A+++   +RI       +AYN ++  L +   +
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLC-NDGQMDKARDLFLDMEENAVVPNVITFDM 419
             AL LFR +      P+ +TY I+  GLC   G + +A D  L+M +   +P   +F M
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677

Query: 420 LIRGFIRI 427
           L  G + +
Sbjct: 678 LAEGLLNL 685



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 222/445 (49%), Gaps = 7/445 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTF +L+K LC   ++  A  +  ++   G  PD  T+TTL+ G         AL +
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M     E G  C    VT   +I+G CK G V+ A   + Q      +P+ +TY + 
Sbjct: 239 KARML----EMG--CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 292

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C       A ++   M+ +G  P+V T+N++++ LCKNG+++EA  +L+ M+  G 
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T+NTL+   C   R+  A +L   +   G    V++++ILIN  CK  +   AL 
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM + G  PD V +NTL   L  + ++ +A  L  +M+  G    T TY T IDGLC
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   I EA E+F  + +     +   +N+LIDGLCK  +++ A  L   +    L PN +
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNI 532

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++   C  G + KA D+   M  N    +V+T+  LI G  +       +++L  M
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592

Query: 441 KEINVMPDASIVSIVVD-LLAKNEI 464
           +   + P     + V+  L  +N I
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNI 617



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 217/419 (51%), Gaps = 6/419 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V +  L+  L   S++    ++++++   G +PDV T+ TL+  LCR      A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM++     GV   P+  T+TT++ G  +EG ++ A  +  +M +       VT   +I
Sbjct: 205 EEMSS----RGVA--PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C      +A     + +  G +P+ +T+N  ++ LC+N  +  A +++D+M+Q G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD FTYN +++  C  G++  AK +   M   GC   + +++ LI   C    +E AL L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             ++  KG+ PDV   N L   L ++     A +LF+EM+ +G   D  TY T ID LC 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + +A++L   +    C      YN++IDGLCK  R+E A E+F  +    +  N +T
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           ++ +I GLC D ++D A  L   M    + PN IT++ ++  + +  +  K  ++L  M
Sbjct: 499 FNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 208/398 (52%), Gaps = 6/398 (1%)

Query: 51  VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC 110
           +FG + D   Y  L+N L   S   +  +++ EM    G  G+  +P+ VT+ T++  LC
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 192

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           +   V  A  +L +M  + + P+  T+T++++GF        A R+   M++ G     V
Sbjct: 193 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T NV+++  CK G++++A   +   I  G  PD  TYNT ++G C    V HA ++   M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G    VF+Y+I++N  CKN ++E A  + ++M+ +G  PD+   NTL   L   +++
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E A  L  ++   GV+ D +T+   I+ LCK G    A+ LF  ++   C  D   YN+L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ID LC  G+L  AL+L + +       + +TY+ +I GLC   ++++A ++F  M+   +
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             N ITF+ LI G  +  +      L+++M    + P+
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPN 530



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           + +D    +   D A +L+L        I+ + V Y  ++            + ++ EM 
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G++P+VVTFN +M  LC+  ++  A  +L+ M   GV PD  T+ TL+ GF   G + 
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  +   M  MGC  T  + ++LINGYCK   +E AL    + ++ G +PD + +NT  
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL +   V  A K+ D M + G   D +TY   ++ LCKNG + EA  + + +    C 
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            DI  +N+LI  LC   RLE AL+L R +    + P+V T++I+I  LC  G    A  L
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F +M+ +   P+ +T++ LI     + +  K ++LL  M+           + ++D L K
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 222/408 (54%), Gaps = 6/408 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++S  +P+  T+  LI+G C+   + +    F ++   GC P+V TY TL++  C+   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  L + M++         +PN ++Y  II+GLC+EG + +A E+L +M  K   P+
Sbjct: 61  IDEAFGLLKSMSSKG------MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 114

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            VTY +++ G+C   ++++A  +  EM+  GV P+VVT+  +++ +CK   ++ A    D
Sbjct: 115 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 174

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G+RP+  TY TL+DGF   G +N A  +   M   G   +V +Y+  I+G+C  +
Sbjct: 175 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 234

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            +E AL +  EM+ KG+ PDVV ++T+  G     +++RAF++  EM   GV+ D  TY 
Sbjct: 235 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 294

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I GLC+   + EA +L   +  +    D   Y +LI+  C  G L  AL L   +   
Sbjct: 295 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHK 354

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             +P+ VTYS++I GL    +  +A+ L   +     VP+ +T+D LI
Sbjct: 355 GFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 227/476 (47%), Gaps = 21/476 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +  G    G + ++   P+ VT+ +LI   C   RI EA  L   +   G +P++ +
Sbjct: 23  VGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS 82

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  ++NGLCR      A  + EEM    G  G    P+ VTY T+++G CKEG   +A  
Sbjct: 83  YNVIINGLCREGSMKEAWEILEEM----GYKGFT--PDEVTYNTLLNGYCKEGNFHQALV 136

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M    + P+VVTYT++I   C A++ N A   F +M  +G++PN  T+  ++D   
Sbjct: 137 IHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFS 196

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G ++EA R+L+ M + G  P   TYN  + G C+  R+  A  +   M   G    V 
Sbjct: 197 RQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVV 256

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SYS +I+G+C+  E++ A  +  EM+ KG+ PD V +++L  GL E+ ++  A  L  EM
Sbjct: 257 SYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM 316

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D +TY T I+  C  G + +A+ L   +       D   Y+ LI+GL K  R 
Sbjct: 317 LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 376

Query: 361 EIALELFRSLPCGVLVPNVVTYSI---------------MIGGLCNDGQMDKARDLFLDM 405
             A  L   L     VP+ VTY                 +I G C  G M +A  +F  M
Sbjct: 377 REAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM 436

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            E    P    ++++I G  R     K   L  +M     +P    V  ++  L K
Sbjct: 437 VERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 492



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 228/476 (47%), Gaps = 21/476 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+   F +L  +      P+ +++  +I GLC E  + EA  +  ++   G  PD  T
Sbjct: 58  MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 117

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG C+  +   AL +  EM   NG       P+ VTYT +I+ +CK   +++A E
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVR-NG-----VSPSVVTYTALINSMCKARNLNRAME 171

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              QM+ + ++PN  TYT++I GF      NEA R+  EM + G  P+VVT+N  +   C
Sbjct: 172 FFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 231

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
              +M+EA  ++  M++ G+ PD  +Y+T++ GFC  G ++ A ++   M   G      
Sbjct: 232 VLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAV 291

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS LI G C+ + +  A  L  EML  G+ PD   + TL         + +A  L DEM
Sbjct: 292 TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM 351

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL--------------RILKCE-FDIR 345
              G   D  TY   I+GL K     EA  L   L               I  C   + +
Sbjct: 352 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK 411

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           +  +LI G C  G +  A  +F S+      P    Y+++I G C  G + KA +L+ +M
Sbjct: 412 SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +  VP+ +T   LI+   +     ++ E++        + +A +  ++V++  K
Sbjct: 472 IHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHK 527



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 190/385 (49%), Gaps = 6/385 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V+TY  L+ G C        L  F EM   NG     C PN VTY T+ID  CK G +
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMER-NG-----CLPNVVTYNTLIDAYCKMGRI 61

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A  LL  M  K ++PN+++Y  +I G C      EA  +  EM  +G  P+ VT+N +
Sbjct: 62  DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++  CK G   +A  +   M+++GV P   TY  L++  C    +N A E F  M   G 
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +    +Y+ LI+G+ +   +  A  + +EM   G  P VV +N    G   + ++E A  
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +  EM   G+A D  +Y T I G C+ G +  A ++   +       D   Y+SLI GLC
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +  RL  A +L + +    L P+  TY+ +I   C +G ++KA  L  +M     +P+ +
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361

Query: 416 TFDMLIRGFIRINEPSKVIELLHKM 440
           T+ +LI G  +     +   LL K+
Sbjct: 362 TYSVLINGLNKQARTREAKRLLFKL 386



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 176/333 (52%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M    + PNV TY  +IRGFC   +  +    F EM   G  PNVVT+N ++D  CK G+
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +DEA  LL  M   G++P+  +YN +++G C  G +  A E+   M   G      +Y+ 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L+NGYCK      AL +++EM+  G+ P VV +  L   + +   + RA + FD+M+  G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  +  TY T IDG  + G + EA  + + +        +  YN+ I G C   R+E AL
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            + + +    L P+VV+YS +I G C  G++D+A  +  +M E  V P+ +T+  LI+G 
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +   ++  +L  +M ++ + PD    + +++
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLIN 333



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 191/365 (52%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN  TY  +I G C  G + K      +M+     PNVVTY ++I  +C     +EA  L
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M  +G+QPN++++NVI++ LC+ G M EA  +L+ M   G  PD  TYNTLL+G+C 
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  +   M   G   +V +Y+ LIN  CK + +  A+  + +M  +G++P+   
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + TL  G      +  A+++ +EM  +G +    TY  FI G C    + EA+ +   + 
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 D+ +Y+++I G C+ G L+ A ++ + +    + P+ VTYS +I GLC   ++ 
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A DL  +M +  + P+  T+  LI  +    + +K + L  +M     +PDA   S+++
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367

Query: 457 DLLAK 461
           + L K
Sbjct: 368 NGLNK 372



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 156/300 (52%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+   V PNV T+N+++   C  G++ +       M ++G  P+  TYNTL+D +C  GR
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++ A  L  SM S G +  + SY+++ING C+   ++ A  +  EM  KG  PD V +NT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G  +     +A  +  EM RNGV+    TY   I+ +CK   +  A+E F  +RI  
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              + R Y +LIDG  + G L  A  +   +      P+VVTY+  I G C   +M++A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +  +M E  + P+V+++  +I GF R  E  +  ++  +M E  V PDA   S ++  L
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 135/412 (32%), Positives = 221/412 (53%), Gaps = 6/412 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   +L+S  +P+  T+  LI+G C    I  A  LF K+   GC P+V TY TL++G C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +         L   MA          EPN ++Y  +I+GLC+EG + +   +L +M  + 
Sbjct: 252 KLRKIDDGFKLLRSMALKG------LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
              + VTY ++I+G+C   ++++A  +  EM+  G+ P+V+T+  ++  +CK G M+ A 
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             LD M   G+ P+  TY TL+DGF   G +N A  +   M   G   +V +Y+ LING+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C   ++E A+++  +M  KG+ PDVV ++T+  G    + V+ A ++  EM   G+  DT
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + I G C+     EA +L+  +  +    D   Y +LI+  C  G LE AL+L   
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +    ++P+VVTYS++I GL    +  +A+ L L +     VP+ +T+  LI
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 247/490 (50%), Gaps = 36/490 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + ++  GF +L  +      P+ +++  +I GLC E R+ E + + T++   G   D  T
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+ G C+  +   AL +  EM       G+   P+ +TYT++I  +CK G +++A E
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEML----RHGLT--PSVITYTSLIHSMCKAGNMNRAME 366

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L QM+ + + PN  TYT+++ GF      NEA R+  EM D G  P+VVT+N +++  C
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GKM++A  +L+ M + G+ PD  +Y+T+L GFC +  V+ A  +   M   G K    
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS LI G+C+ +  + A  LY EML  G+ PD   +  L         +E+A +L +EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVEL---------------FHTLRILKCE-FDI 344
              GV  D  TY   I+GL K     EA  L               +HTL I  C   + 
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL-IENCSNIEF 605

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           ++  SLI G C  G +  A ++F S+      P+   Y+IMI G C  G + KA  L+ +
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665

Query: 405 MEENAVVPNVITFDMLIRGFI---RINEPSKVIELLHKMKEINVMPDASIV--------- 452
           M ++  + + +T   L++      ++NE + VI  + +  E++    A ++         
Sbjct: 666 MVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGN 725

Query: 453 -SIVVDLLAK 461
             +V+D+LA+
Sbjct: 726 MDVVLDVLAE 735



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 228/465 (49%), Gaps = 56/465 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL  + +  ++ D VT+ +LIKG C E    +A  +  ++   G  P V TY
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++ +C+  +   A+   ++M         +C PN  TYTT++DG  ++G++++A  +
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQM-----RVRGLC-PNERTYTTLVDGFSQKGYMNEAYRV 402

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D    P+VVTY ++I G C      +A  +  +M ++G+ P+VV+++ ++   C+
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +  +DEA R+   M++ G++PD  TY++L+ GFC   R   A +L+  M  +G     F+
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LIN YC   ++E AL L++EM+ KG+ PDVV ++ L  GL +  +   A +L  ++ 
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582

Query: 302 RNGVAADTWTYRTFID---------------GLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                    TY T I+               G C  G + EA ++F ++     + D  A
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ------------ 394
           YN +I G C++G +  A  L++ +     + + VT   ++  L  +G+            
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702

Query: 395 -----------------------MDKARDLFLDMEENAVVPNVIT 416
                                  MD   D+  +M ++  +PN I+
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 186/353 (52%), Gaps = 1/353 (0%)

Query: 97  PNTVTYTTIIDGLCKEGF-VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           P  ++Y  ++D   +    +  A+ +  +M +  + PNV TY  +IRGFC+A + + A  
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           LF +M  +G  PNVVT+N ++D  CK  K+D+  +LL  M   G+ P+  +YN +++G C
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             GR+     +   M   G      +Y+ LI GYCK      AL +++EML  G+ P V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            + +L   + +   + RA +  D+M+  G+  +  TY T +DG  + GY+ EA  +   +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                   +  YN+LI+G C +G++E A+ +   +    L P+VV+YS ++ G C    +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           D+A  +  +M E  + P+ IT+  LI+GF       +  +L  +M  + + PD
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 139/277 (50%), Gaps = 1/277 (0%)

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR-VNHAKELFVSM 230
           F++++    +   +D+A  ++ L   HG  P   +YN +LD    + R ++ A+ +F  M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
                   VF+Y+ILI G+C    I+ AL+L+ +M +KG  P+VV +NTL  G  ++ ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           +  FKL   M   G+  +  +Y   I+GLC+ G + E   +   +       D   YN+L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I G CK G    AL +   +    L P+V+TY+ +I  +C  G M++A +    M    +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            PN  T+  L+ GF +    ++   +L +M +    P
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 1/193 (0%)

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF-VGLFEIHQVERA 293
           C  T   + +++  Y +   I+ ALS+     + G  P V+ +N +    +     +  A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             +F EM  + V+ + +TY   I G C  G I  A+ LF  +    C  ++  YN+LIDG
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            CK  +++   +L RS+    L PN+++Y+++I GLC +G+M +   +  +M       +
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309

Query: 414 VITFDMLIRGFIR 426
            +T++ LI+G+ +
Sbjct: 310 EVTYNTLIKGYCK 322


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  250 bits (639), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 139/405 (34%), Positives = 219/405 (54%), Gaps = 11/405 (2%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           A  + SLI          +A A++  +   G  PD +T+  L+N   +         LFE
Sbjct: 89  ASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFE 148

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           EM N N      C PN +TY+ +ID +CK G V+KA ++ L MK +  +PN+ TYTS+I 
Sbjct: 149 EMQNQN------CSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMID 202

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G   +   ++A  LF EM  +G+    V +N ++  L ++G+ D A++L   M+  G++P
Sbjct: 203 GLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQP 262

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D  T+ +L+ G  + GR + A+ +F     +GC   V  Y++LI+  CK+K ++ A  ++
Sbjct: 263 DHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIF 322

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            E+   G+ PDV   N L  GL +  ++  AF L  +M+R G   D   Y T IDGL K+
Sbjct: 323 GELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKS 382

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G + EA +L   ++ L  E D+  YN+LID  CK GR+E AL LF  +       N VTY
Sbjct: 383 GRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTY 441

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAV----VPNVITFDMLIRG 423
           + ++ GLC  G++D+A  LF  M++  V     P+ +T+  L+ G
Sbjct: 442 NTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 132/390 (33%), Positives = 202/390 (51%), Gaps = 11/390 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           +S   PD  TF  L+       R+     LF +++   C P+V TY+ L++ +C+     
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            AL +F +M +        C PN  TYT++IDGL K G VDKA  L  +M  + +    V
Sbjct: 177 KALKVFLDMKSRG------CRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
            Y S+I G   +   + A +LF EM+ +G+QP+ VTF  ++  L   G+  EA R+    
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA 290

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G   D   YN L+D  C + R++ A E+F  +E  G    V++++ L++G CK+  I
Sbjct: 291 RDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRI 350

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  L  +M   G  PDV ++NTL  GL +  +VE A +L  EMQ  G   D  TY T 
Sbjct: 351 HDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTL 410

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC--- 372
           ID  CK G I +A+ LF  +   K   +   YN++++GLC +GR++ A +LF  +     
Sbjct: 411 IDESCKGGRIEDALRLFEEISA-KGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETV 469

Query: 373 -GVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            GV+ P+ VTY+ ++ G    G  + A  L
Sbjct: 470 DGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 182/350 (52%)

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
           G    G ++K+ E L +M+          Y S+I  F  A    +A  ++  M   G++P
Sbjct: 63  GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           +  TFNV+M+   K  ++D   +L + M      P+  TY+ L+D  C  G V  A ++F
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
           + M+S GC+  +F+Y+ +I+G  K+  ++ A  L+ EM S+G+    V++N+L  GL   
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            + + A KLF EM   G+  D  T+ + + GL   G   EA  +F   R + C  D+  Y
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLY 302

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N LID LCKS RL+ A E+F  L    LVP+V T++ ++ GLC  G++  A  L  DM+ 
Sbjct: 303 NVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKR 362

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
               P+V  ++ LI G  +     +  +LL +M+ +   PD    + ++D
Sbjct: 363 AGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 173/336 (51%), Gaps = 8/336 (2%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           ++P +  +  + RG+  A    ++      M           +N ++D   K G   +A 
Sbjct: 52  LQPRI--FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKAL 109

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +  +M Q G+RPD +T+N L++ F    RV+   +LF  M++  C   V +YSILI+  
Sbjct: 110 AVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK   +E AL ++ +M S+G +P++  + ++  GL +   V++AF LF+EM   G+ A  
Sbjct: 170 CKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATR 229

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-- 367
             Y + I GL ++G    A +LF  +     + D   + SL+ GL  +GR   A  +F  
Sbjct: 230 VVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289

Query: 368 -RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            R + C +   +V  Y+++I  LC   ++D+A ++F ++EE+ +VP+V TF+ L+ G  +
Sbjct: 290 ARDVGCAL---DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCK 346

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                    LL  MK     PD ++ + ++D L K+
Sbjct: 347 SGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKS 382



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 133/251 (52%), Gaps = 11/251 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +   +L     PD VTFTSL+ GL    R  EA  +F + R  GC  DV  Y
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLY 302

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ LC++     A  +F E+     E G+V  P+  T+  ++DGLCK G +  A  L
Sbjct: 303 NVLIDTLCKSKRLDEAWEIFGELE----EDGLV--PDVYTFNALMDGLCKSGRIHDAFIL 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  MK     P+V  Y ++I G   +    EA +L +EM   G +P+VVT+N ++DE CK
Sbjct: 357 LGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCK 416

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV-- 239
            G++++A RL + +   G   +  TYNT+L+G C+ GRV+ A +LF  M+       +  
Sbjct: 417 GGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDP 475

Query: 240 --FSYSILING 248
              +Y+ L+NG
Sbjct: 476 DFVTYTTLLNG 486



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 144/286 (50%), Gaps = 11/286 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F +   +         V + SLI GL    R   AA LF ++   G +PD  T+
Sbjct: 208 GHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTF 267

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+LV GL        A  +F+E  +      V C  +   Y  +ID LCK   +D+A E+
Sbjct: 268 TSLVYGLGVAGRASEARRIFQEARD------VGCALDVNLYNVLIDTLCKSKRLDEAWEI 321

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++++  + P+V T+ +++ G C +   ++A  L  +M   G  P+V  +N ++D L K
Sbjct: 322 FGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRK 381

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+++EA +LL  M   G  PD  TYNTL+D  C  GR+  A  LF  + + G  +TV +
Sbjct: 382 SGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTV-T 440

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKG----IKPDVVIHNTLFVG 283
           Y+ ++NG C    ++ A  L++ M  +     I PD V + TL  G
Sbjct: 441 YNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 128/254 (50%)

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           L  G+   G +  + E    ME   C  T  +Y+ LI+ + K    + AL++Y  M   G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           ++PD    N L     +  +V+  +KLF+EMQ    + +  TY   ID +CK G + +A+
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           ++F  ++   C  +I  Y S+IDGL KSG ++ A  LF  +    LV   V Y+ +I GL
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
              G+ D A  LF +M    + P+ +TF  L+ G       S+   +  + +++    D 
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 450 SIVSIVVDLLAKNE 463
           ++ ++++D L K++
Sbjct: 300 NLYNVLIDTLCKSK 313



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 11/193 (5%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   + + G + +    PD  TF +L+ GLC   RI +A  L   ++  GC PDV  Y 
Sbjct: 314 RLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYN 373

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++GL ++     A  L  EM +      +  EP+ VTY T+ID  CK G ++ A  L 
Sbjct: 374 TLIDGLRKSGRVEEAGQLLLEMQS------LGYEPDVVTYNTLIDESCKGGRIEDALRLF 427

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF----IEMMDQGVQPNVVTFNVIMDE 178
            ++  K    N VTY +++ G C A   +EA +LF     E +D  + P+ VT+  +++ 
Sbjct: 428 EEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486

Query: 179 LCKNGKMDEASRL 191
             + G  + A+ L
Sbjct: 487 ARQAGLSELANSL 499


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 152/488 (31%), Positives = 252/488 (51%), Gaps = 42/488 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   +  S   P  V   S I  LC  +RI EA  +F  + + G +P++ +Y+TL++G  
Sbjct: 249 VFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYA 308

Query: 70  R--------------TSHTIV---------------------ALNLFEEMANGNGEFGVV 94
                           S  IV                     A+ +FE+M N     G++
Sbjct: 309 AEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNK----GMI 364

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
             P+TVT+ T+I  LC+ G +D A      M D  + P+   Y  +I+G C   +  +AK
Sbjct: 365 --PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAK 422

Query: 155 RLFIEMMDQGVQP-NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            L  EMM++ + P  V  F+ I++ L K G++ E   ++DLM+Q G RP+  T+N+L++G
Sbjct: 423 ELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEG 482

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +CL G +  A  L  +M S+G +   + Y  L++GYCKN  I+ AL+++ +ML KG+KP 
Sbjct: 483 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 542

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V++N +  GLF+  +   A K+F EM  +G      TY   + GLC+N    EA  L  
Sbjct: 543 SVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLE 602

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            L  +  +FDI  +N +I  + K GR + A ELF ++    LVP V TY++MI  L  + 
Sbjct: 603 KLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEE 662

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
             ++A +LF+ +E++   P+    + ++R  ++  E +K    L  + E N+  +AS +S
Sbjct: 663 SYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTIS 722

Query: 454 IVVDLLAK 461
           ++  L ++
Sbjct: 723 LLASLFSR 730



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 220/479 (45%), Gaps = 42/479 (8%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P   T+  LI       R   A A+F +L   G  PDV +Y TL++G  +      A  
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF +M   +        P+ VTY ++IDGLCK   + K++ +L QM D  I+PN  TY S
Sbjct: 179 LFYKMIEQS------VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNS 232

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G+  A  W E+ R+F EM   G+ P VV  N  +  LC++ ++ EA  + D M+  G
Sbjct: 233 LIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKG 292

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +P+  +Y+TLL G+   G   +   L   M S G       ++ILIN Y +   ++ A+
Sbjct: 293 PKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAM 352

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++ +M +KG+ PD V   T+   L  I +++ A   F+ M   GV      YR  I G 
Sbjct: 353 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGC 412

Query: 320 CKNGYIVEAVELFHTL--------------RILKCEF----------------------D 343
           C +G +V+A EL   +               I+   F                      +
Sbjct: 413 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPN 472

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  +NSL++G C  G +E A  L  ++    + PN   Y  ++ G C +G++D A  +F 
Sbjct: 473 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 532

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           DM    V P  + +++++ G  +    +   ++ H+M E           +V+  L +N
Sbjct: 533 DMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRN 591



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 211/429 (49%), Gaps = 15/429 (3%)

Query: 42  AAALFTKLRVFGCE------PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVV 94
           A  LF ++  + C       P ++TY  L++   R     +AL +F  +   G G     
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLG----- 154

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
             P+  +Y T+IDG  KEG VDKA EL  +M ++++ P+VVTY S+I G C  K+  +++
Sbjct: 155 --PDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSE 212

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           R+  +M+D G++PN  T+N ++      G   E+ R+   M   G+ P     N+ +   
Sbjct: 213 RVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHAL 272

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   R+  AK++F SM   G K  + SYS L++GY          SL + M+SKGI P+ 
Sbjct: 273 CRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNH 332

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
              N L         +++A  +F++MQ  G+  DT T+ T I  LC+ G + +A+  F+ 
Sbjct: 333 RFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 392

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY-SIMIGGLCNDG 393
           +  +        Y  LI G C  G L  A EL   +    + P  V Y S +I  L  +G
Sbjct: 393 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 452

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           ++ + +D+   M +    PNV+TF+ L+ G+  +    +   LL  M  I + P+  I  
Sbjct: 453 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 512

Query: 454 IVVDLLAKN 462
            +VD   KN
Sbjct: 513 TLVDGYCKN 521



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 235/534 (44%), Gaps = 77/534 (14%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M R      V GR+L++   PD  ++ +LI G   E  + +A  LF K+      PDV T
Sbjct: 135 MHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVT 194

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG------------ 108
           Y +L++GLC+T   + +  + E+M +          PN  TY ++I G            
Sbjct: 195 YNSLIDGLCKTKEMVKSERVLEQMVDAG------IRPNNKTYNSLIYGYSTAGMWKESVR 248

Query: 109 -----------------------LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                                  LC+   + +AK++   M  K  KPN+++Y++++ G+ 
Sbjct: 249 VFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYA 308

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
               +     L   M+ +G+ PN   FN++++   + G MD+A  + + M   G+ PD  
Sbjct: 309 AEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTV 368

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T+ T++   C  GR++ A   F  M  +G   +   Y  LI G C + E+  A  L SEM
Sbjct: 369 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEM 428

Query: 266 LSK------------------------------------GIKPDVVIHNTLFVGLFEIHQ 289
           ++K                                    G +P+VV  N+L  G   +  
Sbjct: 429 MNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGN 488

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           +E AF L D M   G+  + + Y T +DG CKNG I +A+ +F  +     +     YN 
Sbjct: 489 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNI 548

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++ GL ++ R   A ++F  +       ++ TY +++GGLC +   D+A  L   +    
Sbjct: 549 ILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMN 608

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           V  ++ITF+++I   +++    +  EL   +    ++P     ++++  L K E
Sbjct: 609 VKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEE 662



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 7/115 (6%)

Query: 355 CKSGRLEIALELFRSLP------CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           C  G   +A+ELF+ +            P + TY+I+I       + + A  +F  +   
Sbjct: 93  CSDGP-ALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRT 151

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            + P+V +++ LI GF +  E  K  EL +KM E +V PD    + ++D L K +
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTK 206


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 243/482 (50%), Gaps = 45/482 (9%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             PD  T+  LI G C E R  EA  +  ++   G +P+  TY  L++G  R      A 
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 340

Query: 79  NLFEEMANGNGEFGVVC--EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
            + +EM        V C  E N + + T+++G+CK G ++KA E++ +M +K ++P+  T
Sbjct: 341 RIKDEM--------VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQT 392

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC---------------- 180
           Y+ +I G C  ++   A  L  EM  + + P V+T++VI++ LC                
Sbjct: 393 YSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV 452

Query: 181 -------------------KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
                              K G+++E+  +L+ M + G+ PD F YN+L+ GFC   R+ 
Sbjct: 453 MNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRME 512

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A+   + M     +    +Y   I+GY K  E+E A   ++EMLS G+ P+V I+  L 
Sbjct: 513 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 572

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G  +   V  AF +F  +    V  D  TY   I GL +NG + EA  +F  L+     
Sbjct: 573 EGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 632

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            +   YNSLI G CK G ++ A +L   +    + P++VTY+I+I GLC  G++++A++L
Sbjct: 633 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNL 692

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F D+E   + PN +T+  ++ G+ +   P+   +LL +M    V PDA I +++++   K
Sbjct: 693 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCK 752

Query: 462 NE 463
            E
Sbjct: 753 EE 754



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 241/477 (50%), Gaps = 43/477 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+T++I   C    + +A  +  ++   GC P++ TY  ++ GLCR      A+ L
Sbjct: 213 PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIEL 272

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M +     G+V  P+  TY  +I+G C E    +AK +LL+M D  +KP  +TY ++
Sbjct: 273 KRSMVDK----GLV--PDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNAL 326

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GF    D  +A R+  EM+  G++ N++ +N +++ +CK GKM++A  ++  M++ GV
Sbjct: 327 IDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV 386

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD+ TY+ L++G C    +  A EL   M+      TV +YS++ING C+   ++G  +
Sbjct: 387 EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNA 446

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +  EM+  G+KP+ V++ TL     +  +VE +  + + M+  G+  D + Y + I G C
Sbjct: 447 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 506

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LPCGVLVPN- 378
           K   + EA      +   +   +   Y + IDG  K+G +EIA   F   L CGVL PN 
Sbjct: 507 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL-PNV 565

Query: 379 ----------------------------------VVTYSIMIGGLCNDGQMDKARDLFLD 404
                                             V TYS++I GL  +G+M +A  +F +
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 625

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++E  ++PN  T++ LI G  +     K  +LL +M    + PD    +I++D L K
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 682



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 217/425 (51%), Gaps = 7/425 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV    ++L R+ +    PD   + SLI G C   R+ EA     ++      P+  TY
Sbjct: 474 GRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 533

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              ++G  +     +A   F EM +     GV+  PN   YT +I+G CKEG V +A  +
Sbjct: 534 GAFIDGYSKAGEMEIADRYFNEMLS----CGVL--PNVGIYTALIEGHCKEGNVTEAFSV 587

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  + +  +V TY+ +I G       +EA  +F E+ ++G+ PN  T+N ++   CK
Sbjct: 588 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 647

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D+AS+LL+ M   G+ PD  TYN L+DG C  G +  AK LF  +E  G      +
Sbjct: 648 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 707

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +++GYCK+K    A  L  EML +G+ PD  I+N +     +  + E+A  LF EM 
Sbjct: 708 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 767

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G A+ T ++ T I+G CK+G + EA  L   +   +   +   Y SLID  CK+G + 
Sbjct: 768 EKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMG 826

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L+  +    ++P   TY+ ++ G  N G M +   LF +M    + P+ +T+ ++I
Sbjct: 827 EAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 886

Query: 422 RGFIR 426
             + R
Sbjct: 887 DAYCR 891



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 227/459 (49%), Gaps = 41/459 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             P+ +T+ +LI G   +  I +A  +  ++   G E ++  + TL+NG+C+      AL
Sbjct: 316 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 375

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            + +EM     E GV  EP++ TY+ +I+G C+   + +A ELL +MK + + P V+TY+
Sbjct: 376 EIMQEMM----EKGV--EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 429

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G C   +      +  EM+  G++PN V +  +M    K G+++E+  +L+ M + 
Sbjct: 430 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 489

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD F YN+L+ GFC   R+  A+   + M     +    +Y   I+GY K  E+E A
Sbjct: 490 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 549

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVG------------LFE-----------------IHQ 289
              ++EMLS G+ P+V I+  L  G            +F                  IH 
Sbjct: 550 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 609

Query: 290 VER------AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           + R      AF +F E+Q  G+  + +TY + I G CK G + +A +L   + I     D
Sbjct: 610 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 669

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           I  YN LIDGLCK+G +E A  LF  +    L PN VTY+ M+ G C       A  L  
Sbjct: 670 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 729

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           +M    V P+   +++++    +  +  K ++L  +M E
Sbjct: 730 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 768



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 216/406 (53%), Gaps = 6/406 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+   +  L++   +    + A+N+F  +   N EF     P+ ++  +++  L K   V
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVF--LGPKNFEF----RPSLLSCNSLLGDLLKGNKV 196

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           +   ++   M    + P+V TYT++I   C   +  +AKR+ +EM ++G  PN+VT+NVI
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC+   +DEA  L   M+  G+ PD +TY+ L++GFC+  R   AK + + M  +G 
Sbjct: 257 IGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 316

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           K    +Y+ LI+G+ +  +IE A  +  EM++ GI+ +++I NTL  G+ +  ++E+A +
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +  EM   GV  D+ TY   I+G C+   +  A EL   ++  K    +  Y+ +I+GLC
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           + G L+    + R +    L PN V Y+ ++     +G+++++R +   M E  ++P+V 
Sbjct: 437 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 496

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++ LI GF +     +    L +M E  + P+A      +D  +K
Sbjct: 497 CYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 542



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 207/422 (49%), Gaps = 7/422 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+  F V   IL      D  T++ LI GL    ++ EA  +F++L+  G  P+ FTY
Sbjct: 579 GNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTY 638

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++G C+  +   A  L EEM            P+ VTY  +IDGLCK G +++AK L
Sbjct: 639 NSLISGSCKQGNVDKASQLLEEMCIKG------INPDIVTYNILIDGLCKAGEIERAKNL 692

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              ++ + + PN VTY +++ G+C +K+   A +L  EM+ +GV P+   +NVI++  CK
Sbjct: 693 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCK 752

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K ++A  L   M++ G      ++NTL++G+C +G++  A  L   M          +
Sbjct: 753 EEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVT 811

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+  CK   +  A  L+ EM  + + P    + +L  G   I  +     LF+EM 
Sbjct: 812 YTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMV 871

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  TY   ID  C+ G ++EA +L   + +      + AY++LI  LCK     
Sbjct: 872 AKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFF 931

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             L+L   +        + T S++  G    G MD+A ++   M +   V N  +   L+
Sbjct: 932 EVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 991

Query: 422 RG 423
            G
Sbjct: 992 DG 993



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 63/310 (20%)

Query: 19   FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             TP+ VT+ +++ G C       A  L  ++ + G  PD F Y  ++N  C+      AL
Sbjct: 701  LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKAL 760

Query: 79   NLFEEM--------------ANGNGEFGVVCE--------------PNTVTYTTIIDGLC 110
            +LF+EM                G  + G + E              PN VTYT++ID  C
Sbjct: 761  DLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 820

Query: 111  KEGFVDKAKELLLQMKDKN-----------------------------------IKPNVV 135
            K G + +AK L L+M+++N                                   I+P+ +
Sbjct: 821  KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 880

Query: 136  TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
            TY  +I  +C   +  EA +L  E++ +G+  +V  ++ ++  LCK  +  E  +LL+ +
Sbjct: 881  TYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEI 940

Query: 196  IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
             + G R    T + +  GF + G ++ A E+  SM   G      S   L++G       
Sbjct: 941  GESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANS 1000

Query: 256  EGALSLYSEM 265
            E + +L  +M
Sbjct: 1001 EDSDNLLKQM 1010



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 6/160 (3%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +G +S    +   ++     PD +T+  +I   C E  +MEA  L  ++ V G    V  
Sbjct: 857  IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAA 916

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y  L+  LC+       L L  E+       G+       T + I  G    G +D+A E
Sbjct: 917  YDALIQALCKKEEFFEVLKLLNEIGESGFRLGL------PTCSVIARGFQIAGNMDEAAE 970

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            +L  M       N  +   ++ G     +  ++  L  +M
Sbjct: 971  VLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 236/436 (54%), Gaps = 8/436 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T++S+IK L  E++  E+  +  ++   GC PDVF +  ++ G  R+++   A  +++ M
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                E G   +P+ V+Y  +I GL K G +D++ ++L +M  +   P++  Y+S++R  
Sbjct: 72  V----ESGY--KPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
             A+  + A  LF EM+  G  P+ + F  ++  LC+ GK+ +AS     M +HG +P+ 
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             YN LL G C +G++  A  LF  M+S  C   V +Y+ L++  CK + +E    L+  
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M + G  P+V+  +TL  GL    ++E+A ++F  M   G   + +TY T I GLC+   
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV-LVPNVVTYS 383
           +++A ELF  +       D  AYNSLI G CK G ++ A +L+R +  G  L P +VT++
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I G C  G++ +A +L  +M    +  +  T+ +LI G  R  +  + +E+  +M+E 
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425

Query: 444 NVMPDA-SIVSIVVDL 458
             + D  S VS V  L
Sbjct: 426 KFLLDPVSCVSFVGGL 441



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 218/406 (53%), Gaps = 7/406 (1%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           +VFTY++++  L + +    +  + EEM          C P+   +  ++ G  +   ++
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEM------MAAGCNPDVFAFNGVMQGFARSNNME 62

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           KA+E+   M +   KP+ V+Y  +I G       +E+ ++  EM+ +G  P++  ++ ++
Sbjct: 63  KAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L K  ++D AS L D MI+ G  PD   +  L+ G C  G+V  A E F  M   GC+
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V  Y++L++G C + ++E A +L++EM S    PDVV +NTL   + +  +VE   KL
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F+ M+  G   +  T+ T I GLC+ G + +A+E+F ++    C+ +   Y +LI GLC+
Sbjct: 243 FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR 302

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA-VVPNVI 415
           + ++  A ELF  +    + P+ V Y+ +I G C  G MD+A  L+ +M   A + P ++
Sbjct: 303 AEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIV 362

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           TF+ LI GF ++ +  +  EL+ +M    +  D+    I++  L++
Sbjct: 363 TFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSR 408



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 222/437 (50%), Gaps = 7/437 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   +++S + PD V++  LI GL    ++ E+  + +++ + G  P +  Y++LV  L 
Sbjct: 67  VYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALA 126

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A +LF+EM  G         P+ + +  +I GLC+ G V  A E   QM    
Sbjct: 127 KARRVDHASSLFDEMIRGGHH------PDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +PNV  Y  ++ G C +    +A  LF EM      P+VVT+N ++D +CK  +++E  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           +L + M   G  P+  T++TL+ G C TG +  A E+F SM   GCK   ++Y+ LI+G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN-GVAAD 308
           C+ +++  A  L+ +M    I PD V +N+L  G  +   ++ A KL+ EM    G+   
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             T+ T IDG CK G +  A EL   +       D   Y  LI GL ++ +L+ ALE+++
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +     + + V+    +GGLC  G +D+A  +F    ++  VPN  TF +L    I++ 
Sbjct: 421 QMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 480

Query: 429 EPSKVIELLHKMKEINV 445
                 +L+   K  ++
Sbjct: 481 RVEDAQKLMEPAKARDI 497



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 211/403 (52%), Gaps = 7/403 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +L  ++    TP    ++SL++ L    R+  A++LF ++   G  PD   
Sbjct: 93  IGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLM 152

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  L+ GLC+      A   F++M          C+PN   Y  ++ GLC  G +++A  
Sbjct: 153 FYELILGLCQAGKVKDASERFKQMPKHG------CQPNVPVYNVLLHGLCSSGQLEQANT 206

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +MK  +  P+VVTY +++   C A+   E  +LF  M   G  PNV+TF+ ++  LC
Sbjct: 207 LFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLC 266

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G++++A  +   M++ G +P+ +TY TL+ G C   +V  A+ELF  M          
Sbjct: 267 RTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAV 326

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           +Y+ LI GYCK   ++ A  LY EM    G++P +V  NTL  G  ++ ++ RA +L  E
Sbjct: 327 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 386

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G+AAD+ TYR  I GL +   + EA+E++  +R  K   D  +  S + GLCK+G 
Sbjct: 387 MGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGN 446

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           ++ A  +F +      VPN  T+ I+   L   G+++ A+ L 
Sbjct: 447 IDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 177/325 (54%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M+DKNI  NV TY+S+I+         E+ ++  EMM  G  P+V  FN +M    ++  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           M++A  +   M++ G +PD  +Y+ L+ G    G+++ + ++   M   G   ++ +YS 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L+    K + ++ A SL+ EM+  G  PD ++   L +GL +  +V+ A + F +M ++G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +   Y   + GLC +G + +A  LF  ++   C  D+  YN+L+D +CK+ R+E   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +LF ++     VPNV+T+S +I GLC  G+++KA ++F  M E    PN  T+  LI G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 425 IRINEPSKVIELLHKMKEINVMPDA 449
            R  +  +  EL  KM +  + PDA
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDA 325



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 160/304 (52%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M D+ +  NV T++ I+  L K  K +E+ ++L+ M+  G  PD F +N ++ GF  +  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           +  A+E++  M   G K    SY ILI+G  K  +++ +L + SEM+ +G  P +  +++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L +  +V+ A  LFDEM R G   D   +   I GLC+ G + +A E F  +    
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C+ ++  YN L+ GLC SG+LE A  LF  +      P+VVTY+ ++  +C   ++++  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            LF  M     VPNVITF  LI G  R  E  K +E+   M E    P+    + ++  L
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 460 AKNE 463
            + E
Sbjct: 301 CRAE 304



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 132/269 (49%), Gaps = 7/269 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV  G  +   +  + + P+ +TF++LI GLC    + +A  +F  +   GC+P+ +TYT
Sbjct: 235 RVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 294

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++GLCR    I A  LFE+M            P+ V Y ++I G CK G +D+A++L 
Sbjct: 295 TLISGLCRAEKVIQARELFEKMTQ------ACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 348

Query: 123 LQMKD-KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            +M     ++P +VT+ ++I GFC       A  L  EM  +G+  +  T+ +++  L +
Sbjct: 349 REMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSR 408

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+DEA  +   M +     D  +  + + G C TG ++ A  +F +    G      +
Sbjct: 409 ATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPET 468

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGI 270
           + IL     K   +E A  L     ++ I
Sbjct: 469 FRILSESLIKLGRVEDAQKLMEPAKARDI 497


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/412 (32%), Positives = 217/412 (52%), Gaps = 6/412 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +   +++S  +P+  T+  LI+G C    +      F ++   GC P+V TY T+++  C
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC 249

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  L   MA           PN ++Y  +I+GLC+EG + +  E+L +M  + 
Sbjct: 250 KLRKIGEAFKLLRLMALKG------LNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+ VT+ ++I G+C   ++++A  L  EM+  G+ PNVVT+  +++ +CK G ++ A 
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             LD M   G+ P+  TY TL+DGF   G +  A ++   M   G   T+ +Y+ LING+
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C    +E A  L  EM+ +G  PDVV ++T+  G     ++E+AF+L  EM   G++ D 
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + I GLCK   + E  +LF  +  L    D   Y SLI+  C  G L+ AL L   
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +      P++VTY+++I G     +  +A+ L L +     VPN IT++ LI
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 236/494 (47%), Gaps = 31/494 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G    G + ++   P+ VT+ ++I   C   +I EA  L   + + G  P++ +Y
Sbjct: 217 GNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NGLCR         + EEM+           P+ VT+ T+I+G C  G   +A  L
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRR------YVPDRVTFNTLINGYCNVGNFHQALVL 330

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + PNVVTYT++I   C A + N A     +M D+G+ PN  T+  ++D   +
Sbjct: 331 HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQ 390

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A +++  M+++G  P   TYN L++G C+ GR+  A  L   M   G    V S
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+G+C+N+E+E A  L  EM++KGI PDV  +++L  GL +  ++     LF EM 
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  TY + I+  C  G + +A+ L   +       DI  YN LI+G  K  R +
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570

Query: 362 IALELFRSLPCGVLVPNVVTYSIMI---------------GGLCNDGQMDKARDLFLDME 406
            A  L   L     VPN +TY+ +I                G C  G M++A  +   M 
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML 630

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN---- 462
           +     N   ++++I G  ++    K   L  +M      P     S+ +  LAK+    
Sbjct: 631 QKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPH----SVTIMALAKSLYHE 686

Query: 463 --EISLNSLPSFTV 474
             E+ LN L  +T+
Sbjct: 687 GKEVELNQLLDYTL 700



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 220/440 (50%), Gaps = 7/440 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIME-AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           F P  +++ +++  +    + ++ A  +F ++   G  P+V+TY  L+ G C   +  + 
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           L  F EM   NG     C PN VTY TIID  CK   + +A +LL  M  K + PN+++Y
Sbjct: 223 LXFFGEMER-NG-----CLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             VI G C      E   +  EM  +   P+ VTFN +++  C  G   +A  L   M++
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +G+ P+  TY TL++  C  G +N A E    M   G      +Y+ LI+G+ +   ++ 
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  +  EM+  G  P ++ +N L  G   + ++E A  L  EM   G   D  +Y T I 
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C+N  + +A +L   +       D+  Y+SLI GLCK  RL    +LF+ +    L P
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + VTY+ +I   C +G +DKA  L  +M +    P+++T+++LI GF + +   +   LL
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576

Query: 438 HKMKEINVMPDASIVSIVVD 457
            K+     +P+    + ++D
Sbjct: 577 LKLLYEESVPNEITYNTLID 596



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 237/485 (48%), Gaps = 37/485 (7%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++   F +L  +      P+ +++  +I GLC E ++ E + +  ++      PD  T+ 
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NG C   +   AL L  EM   NG       PN VTYTT+I+ +CK G +++A E L
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVK-NG-----LSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM+D+ + PN  TYT++I GF       +A ++  EM++ G  P ++T+N +++  C  
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+M++AS LL  MI+ G  PD  +Y+T++ GFC    +  A +L V M + G    V +Y
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI G CK + +     L+ EMLS G+ PD V + +L         +++A +L DEM +
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID---------- 352
            G + D  TY   I+G  K     EA  L   L   +   +   YN+LID          
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606

Query: 353 -----GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
                G C  G +  A  +  S+       N   Y+++I G    G ++KA +L+ +M  
Sbjct: 607 LALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLH 666

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI--NVMPDASIVS--IVVDLLAKNE 463
           +   P+ +T   L +             L H+ KE+  N + D ++ S  I    LAK  
Sbjct: 667 SGFAPHSVTIMALAKS------------LYHEGKEVELNQLLDYTLKSCRITEAALAKVL 714

Query: 464 ISLNS 468
           I +NS
Sbjct: 715 IGINS 719



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 185/368 (50%), Gaps = 1/368 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE-A 153
           C+ ++  +  ++    +   ++KA  ++   K     P V++Y +++      K   + A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           + +F EM++ GV PNV T+N+++   C  G ++        M ++G  P+  TYNT++D 
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDA 247

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +C   ++  A +L   M   G    + SY+++ING C+  +++    +  EM  +   PD
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V  NTL  G   +    +A  L  EM +NG++ +  TY T I+ +CK G +  A+E   
Sbjct: 308 RVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R      + R Y +LIDG  + G L+ A ++ + +      P ++TY+ +I G C  G
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           +M+ A  L  +M E   +P+V+++  +I GF R  E  K  +L  +M    + PD +  S
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 454 IVVDLLAK 461
            ++  L K
Sbjct: 488 SLIQGLCK 495



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 198/424 (46%), Gaps = 50/424 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G      V+   ++K+  +P+ VT+T+LI  +C    +  A     ++R  G  P+  T
Sbjct: 321 VGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRT 380

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMA-NG------------NGE---------FGVVCE-- 96
           YTTL++G  +      A  + +EM  NG            NG           G++ E  
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+ V+Y+TII G C+   ++KA +L ++M  K I P+V TY+S+I+G C  +   
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           E   LF EM+  G+ P+ VT+  +++  C  G +D+A RL D MIQ G  PD  TYN L+
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS-------- 263
           +GF    R   AK L + +          +Y+ LI+  C N E + AL+L          
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSALALMKGFCMKGLM 619

Query: 264 --------EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
                    ML KG K +  ++N +  G  ++  +E+A+ L+ EM  +G A  + T    
Sbjct: 620 NEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL 679

Query: 316 IDGLCKNGYIVEAVELF-HTLRILKCEFDIRAYNSLIDGL-CKSGRLEIALELFRSLPCG 373
              L   G  VE  +L  +TL+   C     A   ++ G+  K G ++    + + +   
Sbjct: 680 AKSLYHEGKEVELNQLLDYTLK--SCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALS 737

Query: 374 VLVP 377
            L+P
Sbjct: 738 GLLP 741



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 1/301 (0%)

Query: 164 GVQPNVVTFNVIMDELCKNGK-MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
           G  P V+++N I+D + +  + +  A  +   M++ GV P+ +TYN L+ GFC  G +  
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
               F  ME  GC   V +Y+ +I+ YCK ++I  A  L   M  KG+ P+++ +N +  
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
           GL    Q++   ++ +EM +     D  T+ T I+G C  G   +A+ L   +       
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           ++  Y +LI+ +CK+G L  A+E    +    L PN  TY+ +I G    G + +A  + 
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +M EN   P +IT++ LI G   +        LL +M E   +PD    S ++    +N
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461

Query: 463 E 463
           +
Sbjct: 462 Q 462


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 249/463 (53%), Gaps = 9/463 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCA--ESRIMEAAALFTKLRVFGCEPDVF 59
           GR +    +   ++     PD +++++++ G     +S + +   +F  +   G  P+  
Sbjct: 288 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 347

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            +  L+N   R      A+ +FE+M N     G++  P+TVT+ T+I  LC+ G +D A 
Sbjct: 348 VFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDDAL 401

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP-NVVTFNVIMDE 178
                M D  + P+   Y  +I+G C   +  +AK L  EMM++ + P  V  F+ I++ 
Sbjct: 402 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 461

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK G++ E   ++D+M+Q G RP+  T+N+L++G+CL G +  A  L  +M S+G +  
Sbjct: 462 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 521

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            + Y  L++GYCKN  I+ AL+++ +ML KG+KP  V+++ +  GLF+  +   A K+F 
Sbjct: 522 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 581

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM  +G      TY   + GLC+N    EA  L   L  +  +FDI  +N +I  + K G
Sbjct: 582 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 641

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R + A ELF ++    LVPN+ TYS+MI  L  +   ++A +LF+ +E++    +    +
Sbjct: 642 RRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLN 701

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++R  +   E +K    L  + E N+  +AS +S++  L ++
Sbjct: 702 HIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSR 744



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 229/461 (49%), Gaps = 18/461 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G  ++GR+LK+   PD  ++ SLI G   +  + +A  LF ++   G  P +    
Sbjct: 115 RPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICN 173

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +++  LC+      A ++ ++M +     G+   P+  TY+ IIDGLCK   +DKA+ +L
Sbjct: 174 SIIKELCKMKEMDKAESIVQKMVDS----GIA--PDLFTYSLIIDGLCKSKAMDKAERVL 227

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM +   +PN +TY S+I G+  +  WNE+ R+F +M   GV P V   N  +  L K+
Sbjct: 228 EQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH 287

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF------CLTGRVNHAKELFVSMESMGCK 236
           G+ +EA  + D M+  G +PD  +Y+T+L G+      CL    N    +F  M + G  
Sbjct: 288 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN----IFNLMLTKGIA 343

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
                ++ILIN Y +   ++ A+ ++ +M +KG+ PD V   T+   L  I +++ A   
Sbjct: 344 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 403

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD-IRAYNSLIDGLC 355
           F+ M   GV      Y   I G C +G +V+A EL   +         ++ ++S+I+ LC
Sbjct: 404 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 463

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K GR+    ++   +      PNVVT++ ++ G C  G M++A  L   M    + PN  
Sbjct: 464 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 523

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +  L+ G+ +       + +   M    V P + + SI++
Sbjct: 524 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 564



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 221/446 (49%), Gaps = 47/446 (10%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           P + TY  L++   R     + L +   +  NG G       P+  +Y+ +I G  K+G 
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG-------PDDFSYS-LIYGFVKDGE 149

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           VDKA  L L+M ++ + P ++   S+I+  C  K+ ++A+ +  +M+D G+ P++ T+++
Sbjct: 150 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 209

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT----------------- 217
           I+D LCK+  MD+A R+L+ M++ G RP++ TYN+L+ G+ ++                 
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 269

Query: 218 ------------------GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE--IEG 257
                             GR N AK +F SM   G K  + SYS +++GY    +  +  
Sbjct: 270 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 329

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
             ++++ ML+KGI P+  + N L         +++A  +F++MQ  G+  DT T+ T I 
Sbjct: 330 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 389

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC+ G + +A+  F+ +  +        Y  LI G C  G L  A EL   +    + P
Sbjct: 390 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 449

Query: 378 NVVTY-SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
             V Y S +I  LC +G++ + +D+   M +    PNV+TF+ L+ G+  +    +   L
Sbjct: 450 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 509

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
           L  M  I + P+  I   +VD   KN
Sbjct: 510 LDAMASIGIEPNCYIYGTLVDGYCKN 535



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/535 (24%), Positives = 237/535 (44%), Gaps = 79/535 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +   +++    P  +   S+IK LC    + +A ++  K+   G  PD+FTY
Sbjct: 148 GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTY 207

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG------------- 108
           + +++GLC++     A  + E+M     E G    PN++TY ++I G             
Sbjct: 208 SLIIDGLCKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHGYSISGMWNESVRV 261

Query: 109 ----------------------LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                                 L K G  ++AK +   M  K  KP++++Y++++ G+  
Sbjct: 262 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 321

Query: 147 AKD--WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           A D    +   +F  M+ +G+ PN   FN++++   + G MD+A  + + M   G+ PD 
Sbjct: 322 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 381

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            T+ T++   C  GR++ A   F  M  +G   +   Y  LI G C + E+  A  L SE
Sbjct: 382 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 441

Query: 265 MLSK------------------------------------GIKPDVVIHNTLFVGLFEIH 288
           M++K                                    G +P+VV  N+L  G   + 
Sbjct: 442 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 501

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            +E AF L D M   G+  + + Y T +DG CKNG I +A+ +F  +     +     Y+
Sbjct: 502 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 561

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            ++ GL ++ R   A ++F  +       ++ TY +++GGLC +   D+A  L   +   
Sbjct: 562 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 621

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            V  ++ITF+++I    ++    +  EL   +    ++P+    S+++  L K E
Sbjct: 622 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 676



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 12/330 (3%)

Query: 2   GRVSHGFVVLGRIL------KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           G  +HG +V  + L      K    P    F+S+I  LC E R+ E   +   +   G  
Sbjct: 425 GCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR 484

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V T+ +L+ G C   +   A  L + MA+      +  EPN   Y T++DG CK G +
Sbjct: 485 PNVVTFNSLMEGYCLVGNMEEAFALLDAMAS------IGIEPNCYIYGTLVDGYCKNGRI 538

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  +   M  K +KP  V Y+ ++ G   A+    AK++F EM++ G   ++ T+ V+
Sbjct: 539 DDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVV 598

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC+N   DEA+ LL+ +    V+ D  T+N ++      GR   AKELF ++ + G 
Sbjct: 599 LGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGL 658

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + +YS++I    K +  E A +L+  +   G   D  + N +   L    +V +A  
Sbjct: 659 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASN 718

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
               +  N +  +  T         + G I
Sbjct: 719 YLSIIGENNLTLEASTISLLASLFSREGMI 748



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 6/211 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +L  +      P+   + +L+ G C   RI +A  +F  +   G +P    
Sbjct: 500 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 559

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GL +   T  A  +F EM        +       TY  ++ GLC+    D+A  
Sbjct: 560 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSI------HTYGVVLGGLCRNNCTDEANM 613

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL ++   N+K +++T+  VI          EAK LF  +   G+ PN+ T+++++  L 
Sbjct: 614 LLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI 673

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           K    +EA  L   + + G   D+   N ++
Sbjct: 674 KEESYEEADNLFISVEKSGHASDSRLLNHIV 704



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           I  YN LID   +  R ++ L +   L    L P+  +YS +I G   DG++DKA  LFL
Sbjct: 100 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 158

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +M E  V+P ++  + +I+   ++ E  K   ++ KM +  + PD    S+++D L K++
Sbjct: 159 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 218


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 154/474 (32%), Positives = 242/474 (51%), Gaps = 36/474 (7%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT  S +  LC   +  EAA  F  +   G +P++ TY+ L++G       +  LNL
Sbjct: 330 PNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNL 389

Query: 81  FEEMANGNG--------------------------------EFGVVCEPNTVTYTTIIDG 108
           F  M  GNG                                E GV+  P+  TY  +I  
Sbjct: 390 FNSM-EGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVI--PDACTYGIVIAA 446

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-QP 167
             + G +  A +   QM    +KP  + Y S+I+GFC   +  +AK L  EMM +G+ +P
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRP 506

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N+V FN I++ LCK G++ EA  + D +I  G RPD  T+N+L+DG+ L G++  A  + 
Sbjct: 507 NIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVL 566

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
            +M S G +  V SY+ LI+GYC+N  I+  L L+ EMLSKG+KP  + +  +  GLF  
Sbjct: 567 DAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFND 626

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            +   A K+  EM  +G   D  T    + GLC+N    EA+ +F  L  +  +F+I   
Sbjct: 627 GRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAII 686

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N++ID + K  + E A ELF S+    LVPN  TY +MI  L  +G +++A ++F  ME+
Sbjct: 687 NTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEK 746

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +   P+    + +IR  +   E  K    + K+    +  +AS VS+++ L ++
Sbjct: 747 SGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSR 800



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 151/492 (30%), Positives = 243/492 (49%), Gaps = 44/492 (8%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTYTTLVN 66
           ++L R+ +    PD +++ +++K LC +SR   A  L   +  +  GC P+V TY T+++
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GL R      A NLF EM     + GVV  P+ VTYT+IID LCK   +DKA+ +L QM 
Sbjct: 236 GLFREGEVSKACNLFHEMM----QQGVV--PDVVTYTSIIDALCKARAMDKAELVLRQMI 289

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
               +PN VTY  +I G+  +  W E   +F EM  QG+ PN+VT N  M  LCK+GK  
Sbjct: 290 SNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSK 349

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVF---- 240
           EA+   D M   G +P+  TY+ LL G+   G       LF SME  G      VF    
Sbjct: 350 EAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVI 409

Query: 241 -----------------------------SYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
                                        +Y I+I  + +   +  A+  +++M++ G+K
Sbjct: 410 DAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLK 469

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY-RTFIDGLCKNGYIVEAVE 330
           P+ +++++L  G      + +A +L  EM   G+      +  + I+ LCK G +VEA +
Sbjct: 470 PEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHD 529

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +F  +  +    D+  +NSLIDG    G++E A  +  ++    + P+VV+Y+ +I G C
Sbjct: 530 IFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYC 589

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            +G++D    LF +M    V P  IT+ +++ G           ++ H+M E     D S
Sbjct: 590 RNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIS 649

Query: 451 IVSIVVDLLAKN 462
              I++  L +N
Sbjct: 650 TCGIILGGLCRN 661



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 231/462 (50%), Gaps = 6/462 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFT-KLRVFGCEPDVFTY 61
           R + GF + GR LK+    D +  + L+K L    R  +   L   ++   G EPD  +Y
Sbjct: 134 RPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISY 193

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+V  LC  S +  AL+L   M   +G     C PN VTY T+I GL +EG V KA  L
Sbjct: 194 NTVVKTLCEDSRSQRALDLLHTMVKKSGG----CSPNVVTYNTVIHGLFREGEVSKACNL 249

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + + P+VVTYTS+I   C A+  ++A+ +  +M+  G QPN VT+N ++     
Sbjct: 250 FHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSI 309

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+  E + +   M   G+ P+  T N+ +   C  G+   A E F SM + G K  + +
Sbjct: 310 SGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVT 369

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS+L++GY         L+L++ M   GI  D  + N +     +   ++    +F +MQ
Sbjct: 370 YSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQ 429

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  D  TY   I    + G + +A++ F+ +  +  + +   Y+SLI G C  G L 
Sbjct: 430 EQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLV 489

Query: 362 IALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A EL   +   G+  PN+V ++ +I  LC +G++ +A D+F  +      P+VITF+ L
Sbjct: 490 KAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSL 549

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           I G+  + +  K   +L  M    + PD    + ++D   +N
Sbjct: 550 IDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRN 591



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 236/470 (50%), Gaps = 19/470 (4%)

Query: 4   VSHGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF- 52
           V HG    G + K+C            PD VT+TS+I  LC ++R M+ A L  +  +  
Sbjct: 233 VIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALC-KARAMDKAELVLRQMISN 291

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G +P+  TY  +++G   +        +F EM +     G++  PN VT  + +  LCK 
Sbjct: 292 GFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQ----GLM--PNIVTCNSYMSSLCKH 345

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G   +A E    M  K  KPN+VTY+ ++ G+     + +   LF  M   G+  +   F
Sbjct: 346 GKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVF 405

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N+++D   K G MDE   +   M + GV PDA TY  ++  F   GR+  A + F  M +
Sbjct: 406 NIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIA 465

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIHNTLFVGLFEIHQVE 291
           MG K     Y  LI G+C +  +  A  L SEM+S+GI +P++V  N++   L +  +V 
Sbjct: 466 MGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVV 525

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A  +FD +   G   D  T+ + IDG    G I +A  +   +     E D+ +YN+LI
Sbjct: 526 EAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLI 585

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG C++GR++  L LF  +    + P  +TY I++ GL NDG+   A+ +  +M E+   
Sbjct: 586 DGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTT 645

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++ T  +++ G  R N   + I +  K+  +NV  + +I++ ++D + K
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYK 695



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 206/450 (45%), Gaps = 22/450 (4%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLI-KGLCAESRIM--------------EAAALFTK 48
           V++  ++ G   + CF      F S+   G+ A+ R+               E   +FT+
Sbjct: 368 VTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQ 427

Query: 49  LRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG 108
           ++  G  PD  TY  ++    R      A++ F +M        +  +P  + Y ++I G
Sbjct: 428 MQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQM------IAMGLKPEGIVYHSLIQG 481

Query: 109 LCKEGFVDKAKELLLQMKDKNI-KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            C  G + KAKEL+ +M  + I +PN+V + S+I   C      EA  +F  ++  G +P
Sbjct: 482 FCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERP 541

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           +V+TFN ++D     GK+++A  +LD MI  G+ PD  +YNTL+DG+C  GR++    LF
Sbjct: 542 DVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILF 601

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M S G K T  +Y I+++G   +    GA  +  EM+  G   D+     +  GL   
Sbjct: 602 GEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN 661

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
           +  + A  +F ++    V  +     T ID + K     EA ELF ++       +   Y
Sbjct: 662 NCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTY 721

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
             +I  L K G +E A  +F  +      P+    + +I  L   G++ KA +    ++ 
Sbjct: 722 GVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDG 781

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELL 437
             +     T  +L+  F R  +  + ++LL
Sbjct: 782 KRISLEASTVSLLMALFSREGKYWEDVKLL 811



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 165/329 (50%), Gaps = 7/329 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVF 59
           MGR++       +++     P+ + + SLI+G C    +++A  L +++   G   P++ 
Sbjct: 450 MGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIV 509

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            + +++N LC+    + A ++F+ + +  GE      P+ +T+ ++IDG    G ++KA 
Sbjct: 510 FFNSIINSLCKEGRVVEAHDIFDFVIH-IGE-----RPDVITFNSLIDGYGLVGKIEKAF 563

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +L  M    I+P+VV+Y ++I G+C     ++   LF EM+ +GV+P  +T+ +I+  L
Sbjct: 564 GVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGL 623

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
             +G+   A ++   MI+ G   D  T   +L G C     + A  +F  + +M  K  +
Sbjct: 624 FNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNI 683

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
              + +I+   K ++ E A  L+  + + G+ P+   +  +   L +   VE A  +F  
Sbjct: 684 AIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSL 743

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           M+++G A  +      I  L + G IV+A
Sbjct: 744 MEKSGCAPSSRLLNYIIRVLLEKGEIVKA 772



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 153/333 (45%), Gaps = 38/333 (11%)

Query: 167 PNVVTFNVIMDELCKNG-----------------KMD------------EASR------- 190
           P V T+N++MD  C+                   KMD             A R       
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILING 248
           LL  M + GV PD  +YNT++   C   R   A +L  +M  +S GC   V +Y+ +I+G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
             +  E+  A +L+ EM+ +G+ PDVV + ++   L +   +++A  +  +M  NG   +
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY   I G   +G   E   +F  +       +I   NS +  LCK G+ + A E F 
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           S+      PN+VTYS+++ G   +G      +LF  ME N +V +   F+++I  + +  
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              + + +  +M+E  V+PDA    IV+   ++
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSR 449


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/458 (32%), Positives = 245/458 (53%), Gaps = 5/458 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVF 59
           +G ++  F  LG+I+K+    +A++FT +++ LCAE R  +A  +  +     GC PDVF
Sbjct: 26  VGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVF 85

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +YT L+ GLC       A++L   MA    E G  C PN V+YTT+I G  KE  V KA 
Sbjct: 86  SYTVLLKGLCDEKKCEEAVDLIHMMA----EDGDHCPPNVVSYTTVIHGFFKEDEVGKAY 141

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L  +M D+ I P+VVT  S+I G C  +  ++A+ +  +M D+ + P+  T+N ++   
Sbjct: 142 TLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGY 201

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
             +G++ EA R+L  M +HG  P+  TY+ L+D  C  G    A+E+  SM        V
Sbjct: 202 LSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNV 261

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y  L++GY    ++    +L   M+  G++PD  I N       +  +++ A   F++
Sbjct: 262 ATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNK 321

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M++ G+  D  +Y T IDGLCK G +  A+  F  +       DI  + +LI G    G+
Sbjct: 322 MRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGK 381

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E A ELF  +    + P VV ++ MI  L  +G++ +A+ LF  M   +V PNV++++ 
Sbjct: 382 WEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNA 441

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +I G+    +  +V++LL  M  + + P+A   + ++D
Sbjct: 442 IIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLD 479



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 210/430 (48%), Gaps = 7/430 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+T LI   C    +  A A   ++   G   +  ++T ++  LC    T  A+N+
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVTYT 138
                   G     C P+  +YT ++ GLC E   ++A +L+  M +   +  PNVV+YT
Sbjct: 71  VIRWTPKLG-----CTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +VI GF    +  +A  LF EM+D+G+ P+VVT N I+D LCK   MD+A  +L  M   
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            + PD  TYN+L+ G+  +G++  A  +   M   G      +YS+LI+  CK      A
Sbjct: 186 HIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEA 245

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             + + M+     P+V  +  L  G      +     L D M +NGV  D   +   I  
Sbjct: 246 REILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYA 305

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             K G + EA+  F+ +R      DI +Y ++IDGLCK GRL+ A+  F  +    L P+
Sbjct: 306 YVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPD 365

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +V ++ +I G    G+ +KA +LF +M +  + P V+ F  +I    +  + ++   L  
Sbjct: 366 IVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFD 425

Query: 439 KMKEINVMPD 448
            M   +V P+
Sbjct: 426 LMPIASVKPN 435



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 187/403 (46%), Gaps = 38/403 (9%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P TVTYT +I   C  G ++ A   L Q+    ++ N +++T ++R  C  K  ++A  +
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 157 FIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDG 213
            I    + G  P+V ++ V++  LC   K +EA  L+ +M + G    P+  +Y T++ G
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           F     V  A  LF  M   G    V + + +I+G CK + ++ A  +  +M  K I PD
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +N+L  G     Q++ A ++  +M R+G   +  TY   ID LCK G   EA E+ +
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILN 250

Query: 334 TLRILKCEFDIRAYNSLIDGLC-----------------------------------KSG 358
           ++   +   ++  Y  L+ G                                     K G
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCG 310

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           RL+ A+  F  +    L+P++++Y  MI GLC  G++D A   F  M ++ + P+++ F 
Sbjct: 311 RLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFT 370

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            LI GF    +  K  EL ++M +  + P   + + ++D L K
Sbjct: 371 NLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFK 413



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 163/337 (48%), Gaps = 3/337 (0%)

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           K + P  VTYT +I   CY    N A     +++  G++ N ++F  I+  LC   +  +
Sbjct: 7   KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66

Query: 188 ASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYSI 244
           A  + +    + G  PD F+Y  LL G C   +   A +L   M   G  C   V SY+ 
Sbjct: 67  AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+G+ K  E+  A +L+ EML +GI PDVV  N++  GL ++  +++A ++  +M    
Sbjct: 127 VIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D  TY + + G   +G + EAV +   +       +   Y+ LID LCK G    A 
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAR 246

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E+  S+      PNV TY  ++ G    G + +  +L   M +N V P+   F++ I  +
Sbjct: 247 EILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAY 306

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++     + +   +KM++  +MPD      ++D L K
Sbjct: 307 VKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCK 343


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 249/463 (53%), Gaps = 9/463 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCA--ESRIMEAAALFTKLRVFGCEPDVF 59
           GR +    +   ++     PD +++++++ G     +S + +   +F  +   G  P+  
Sbjct: 202 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 261

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            +  L+N   R      A+ +FE+M N     G++  P+TVT+ T+I  LC+ G +D A 
Sbjct: 262 VFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDDAL 315

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP-NVVTFNVIMDE 178
                M D  + P+   Y  +I+G C   +  +AK L  EMM++ + P  V  F+ I++ 
Sbjct: 316 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 375

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK G++ E   ++D+M+Q G RP+  T+N+L++G+CL G +  A  L  +M S+G +  
Sbjct: 376 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 435

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            + Y  L++GYCKN  I+ AL+++ +ML KG+KP  V+++ +  GLF+  +   A K+F 
Sbjct: 436 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 495

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM  +G      TY   + GLC+N    EA  L   L  +  +FDI  +N +I  + K G
Sbjct: 496 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 555

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R + A ELF ++    LVPN+ TYS+MI  L  +   ++A +LF+ +E++    +    +
Sbjct: 556 RRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLN 615

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++R  +   E +K    L  + E N+  +AS +S++  L ++
Sbjct: 616 HIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSR 658



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 229/461 (49%), Gaps = 18/461 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G  ++GR+LK+   PD  ++ SLI G   +  + +A  LF ++   G  P +    
Sbjct: 29  RPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICN 87

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +++  LC+      A ++ ++M +     G+   P+  TY+ IIDGLCK   +DKA+ +L
Sbjct: 88  SIIKELCKMKEMDKAESIVQKMVDS----GIA--PDLFTYSLIIDGLCKSKAMDKAERVL 141

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM +   +PN +TY S+I G+  +  WNE+ R+F +M   GV P V   N  +  L K+
Sbjct: 142 EQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH 201

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF------CLTGRVNHAKELFVSMESMGCK 236
           G+ +EA  + D M+  G +PD  +Y+T+L G+      CL    N    +F  M + G  
Sbjct: 202 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN----IFNLMLTKGIA 257

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
                ++ILIN Y +   ++ A+ ++ +M +KG+ PD V   T+   L  I +++ A   
Sbjct: 258 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 317

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD-IRAYNSLIDGLC 355
           F+ M   GV      Y   I G C +G +V+A EL   +         ++ ++S+I+ LC
Sbjct: 318 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 377

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K GR+    ++   +      PNVVT++ ++ G C  G M++A  L   M    + PN  
Sbjct: 378 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 437

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +  L+ G+ +       + +   M    V P + + SI++
Sbjct: 438 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 478



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 221/446 (49%), Gaps = 47/446 (10%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           P + TY  L++   R     + L +   +  NG G       P+  +Y+ +I G  K+G 
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG-------PDDFSYS-LIYGFVKDGE 63

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           VDKA  L L+M ++ + P ++   S+I+  C  K+ ++A+ +  +M+D G+ P++ T+++
Sbjct: 64  VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 123

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT----------------- 217
           I+D LCK+  MD+A R+L+ M++ G RP++ TYN+L+ G+ ++                 
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 183

Query: 218 ------------------GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE--IEG 257
                             GR N AK +F SM   G K  + SYS +++GY    +  +  
Sbjct: 184 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 243

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
             ++++ ML+KGI P+  + N L         +++A  +F++MQ  G+  DT T+ T I 
Sbjct: 244 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 303

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC+ G + +A+  F+ +  +        Y  LI G C  G L  A EL   +    + P
Sbjct: 304 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 363

Query: 378 NVVTY-SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
             V Y S +I  LC +G++ + +D+   M +    PNV+TF+ L+ G+  +    +   L
Sbjct: 364 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 423

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
           L  M  I + P+  I   +VD   KN
Sbjct: 424 LDAMASIGIEPNCYIYGTLVDGYCKN 449



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/535 (24%), Positives = 237/535 (44%), Gaps = 79/535 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +   +++    P  +   S+IK LC    + +A ++  K+   G  PD+FTY
Sbjct: 62  GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTY 121

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG------------- 108
           + +++GLC++     A  + E+M     E G    PN++TY ++I G             
Sbjct: 122 SLIIDGLCKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHGYSISGMWNESVRV 175

Query: 109 ----------------------LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                                 L K G  ++AK +   M  K  KP++++Y++++ G+  
Sbjct: 176 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 235

Query: 147 AKD--WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           A D    +   +F  M+ +G+ PN   FN++++   + G MD+A  + + M   G+ PD 
Sbjct: 236 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 295

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            T+ T++   C  GR++ A   F  M  +G   +   Y  LI G C + E+  A  L SE
Sbjct: 296 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 355

Query: 265 MLSK------------------------------------GIKPDVVIHNTLFVGLFEIH 288
           M++K                                    G +P+VV  N+L  G   + 
Sbjct: 356 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 415

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            +E AF L D M   G+  + + Y T +DG CKNG I +A+ +F  +     +     Y+
Sbjct: 416 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 475

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            ++ GL ++ R   A ++F  +       ++ TY +++GGLC +   D+A  L   +   
Sbjct: 476 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 535

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            V  ++ITF+++I    ++    +  EL   +    ++P+    S+++  L K E
Sbjct: 536 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 590



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 12/337 (3%)

Query: 2   GRVSHGFVVLGRIL------KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           G  +HG +V  + L      K    P    F+S+I  LC E R+ E   +   +   G  
Sbjct: 339 GCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR 398

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V T+ +L+ G C   +   A  L + MA+      +  EPN   Y T++DG CK G +
Sbjct: 399 PNVVTFNSLMEGYCLVGNMEEAFALLDAMAS------IGIEPNCYIYGTLVDGYCKNGRI 452

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  +   M  K +KP  V Y+ ++ G   A+    AK++F EM++ G   ++ T+ V+
Sbjct: 453 DDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVV 512

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC+N   DEA+ LL+ +    V+ D  T+N ++      GR   AKELF ++ + G 
Sbjct: 513 LGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGL 572

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + +YS++I    K +  E A +L+  +   G   D  + N +   L    +V +A  
Sbjct: 573 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASN 632

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
               +  N +  +  T         + G   E ++L 
Sbjct: 633 YLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 669



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 6/211 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +L  +      P+   + +L+ G C   RI +A  +F  +   G +P    
Sbjct: 414 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 473

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GL +   T  A  +F EM        +       TY  ++ GLC+    D+A  
Sbjct: 474 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSI------HTYGVVLGGLCRNNCTDEANM 527

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL ++   N+K +++T+  VI          EAK LF  +   G+ PN+ T+++++  L 
Sbjct: 528 LLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI 587

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           K    +EA  L   + + G   D+   N ++
Sbjct: 588 KEESYEEADNLFISVEKSGHASDSRLLNHIV 618



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           I  YN LID   +  R ++ L +   L    L P+  +YS +I G   DG++DKA  LFL
Sbjct: 14  IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 72

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +M E  V+P ++  + +I+   ++ E  K   ++ KM +  + PD    S+++D L K++
Sbjct: 73  EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 132


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 249/463 (53%), Gaps = 9/463 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCA--ESRIMEAAALFTKLRVFGCEPDVF 59
           GR +    +   ++     PD +++++++ G     +S + +   +F  +   G  P+  
Sbjct: 344 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 403

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            +  L+N   R      A+ +FE+M N     G++  P+TVT+ T+I  LC+ G +D A 
Sbjct: 404 VFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDDAL 457

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP-NVVTFNVIMDE 178
                M D  + P+   Y  +I+G C   +  +AK L  EMM++ + P  V  F+ I++ 
Sbjct: 458 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 517

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK G++ E   ++D+M+Q G RP+  T+N+L++G+CL G +  A  L  +M S+G +  
Sbjct: 518 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 577

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            + Y  L++GYCKN  I+ AL+++ +ML KG+KP  V+++ +  GLF+  +   A K+F 
Sbjct: 578 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 637

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM  +G      TY   + GLC+N    EA  L   L  +  +FDI  +N +I  + K G
Sbjct: 638 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 697

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R + A ELF ++    LVPN+ TYS+MI  L  +   ++A +LF+ +E++    +    +
Sbjct: 698 RRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLN 757

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++R  +   E +K    L  + E N+  +AS +S++  L ++
Sbjct: 758 HIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSR 800



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 229/461 (49%), Gaps = 18/461 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G  ++GR+LK+   PD  ++ SLI G   +  + +A  LF ++   G  P +    
Sbjct: 171 RPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICN 229

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +++  LC+      A ++ ++M +     G+   P+  TY+ IIDGLCK   +DKA+ +L
Sbjct: 230 SIIKELCKMKEMDKAESIVQKMVDS----GIA--PDLFTYSLIIDGLCKSKAMDKAERVL 283

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM +   +PN +TY S+I G+  +  WNE+ R+F +M   GV P V   N  +  L K+
Sbjct: 284 EQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH 343

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF------CLTGRVNHAKELFVSMESMGCK 236
           G+ +EA  + D M+  G +PD  +Y+T+L G+      CL    N    +F  M + G  
Sbjct: 344 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN----IFNLMLTKGIA 399

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
                ++ILIN Y +   ++ A+ ++ +M +KG+ PD V   T+   L  I +++ A   
Sbjct: 400 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 459

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD-IRAYNSLIDGLC 355
           F+ M   GV      Y   I G C +G +V+A EL   +         ++ ++S+I+ LC
Sbjct: 460 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 519

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K GR+    ++   +      PNVVT++ ++ G C  G M++A  L   M    + PN  
Sbjct: 520 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 579

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +  L+ G+ +       + +   M    V P + + SI++
Sbjct: 580 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 620



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 228/464 (49%), Gaps = 51/464 (10%)

Query: 42  AAALFTKLRVFGCE----PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCE 96
           A  LF ++  + C     P + TY  L++   R     + L +   +  NG G       
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG------- 188

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+  +Y+ +I G  K+G VDKA  L L+M ++ + P ++   S+I+  C  K+ ++A+ +
Sbjct: 189 PDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 247

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +M+D G+ P++ T+++I+D LCK+  MD+A R+L+ M++ G RP++ TYN+L+ G+ +
Sbjct: 248 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 307

Query: 217 T-----------------------------------GRVNHAKELFVSMESMGCKHTVFS 241
           +                                   GR N AK +F SM   G K  + S
Sbjct: 308 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 367

Query: 242 YSILINGYCKNKE--IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           YS +++GY    +  +    ++++ ML+KGI P+  + N L         +++A  +F++
Sbjct: 368 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 427

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           MQ  G+  DT T+ T I  LC+ G + +A+  F+ +  +        Y  LI G C  G 
Sbjct: 428 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 487

Query: 360 LEIALELFRSLPCGVLVPNVVTY-SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           L  A EL   +    + P  V Y S +I  LC +G++ + +D+   M +    PNV+TF+
Sbjct: 488 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 547

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            L+ G+  +    +   LL  M  I + P+  I   +VD   KN
Sbjct: 548 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 591



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/535 (24%), Positives = 237/535 (44%), Gaps = 79/535 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +   +++    P  +   S+IK LC    + +A ++  K+   G  PD+FTY
Sbjct: 204 GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTY 263

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG------------- 108
           + +++GLC++     A  + E+M     E G    PN++TY ++I G             
Sbjct: 264 SLIIDGLCKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHGYSISGMWNESVRV 317

Query: 109 ----------------------LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                                 L K G  ++AK +   M  K  KP++++Y++++ G+  
Sbjct: 318 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 377

Query: 147 AKD--WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           A D    +   +F  M+ +G+ PN   FN++++   + G MD+A  + + M   G+ PD 
Sbjct: 378 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 437

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            T+ T++   C  GR++ A   F  M  +G   +   Y  LI G C + E+  A  L SE
Sbjct: 438 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 497

Query: 265 MLSK------------------------------------GIKPDVVIHNTLFVGLFEIH 288
           M++K                                    G +P+VV  N+L  G   + 
Sbjct: 498 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 557

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            +E AF L D M   G+  + + Y T +DG CKNG I +A+ +F  +     +     Y+
Sbjct: 558 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 617

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            ++ GL ++ R   A ++F  +       ++ TY +++GGLC +   D+A  L   +   
Sbjct: 618 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 677

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            V  ++ITF+++I    ++    +  EL   +    ++P+    S+++  L K E
Sbjct: 678 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 732



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 12/330 (3%)

Query: 2   GRVSHGFVVLGRIL------KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           G  +HG +V  + L      K    P    F+S+I  LC E R+ E   +   +   G  
Sbjct: 481 GCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR 540

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V T+ +L+ G C   +   A  L + MA+      +  EPN   Y T++DG CK G +
Sbjct: 541 PNVVTFNSLMEGYCLVGNMEEAFALLDAMAS------IGIEPNCYIYGTLVDGYCKNGRI 594

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  +   M  K +KP  V Y+ ++ G   A+    AK++F EM++ G   ++ T+ V+
Sbjct: 595 DDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVV 654

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC+N   DEA+ LL+ +    V+ D  T+N ++      GR   AKELF ++ + G 
Sbjct: 655 LGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGL 714

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + +YS++I    K +  E A +L+  +   G   D  + N +   L    +V +A  
Sbjct: 715 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASN 774

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
               +  N +  +  T         + G I
Sbjct: 775 YLSIIGENNLTLEASTISLLASLFSREGMI 804



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 6/211 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +L  +      P+   + +L+ G C   RI +A  +F  +   G +P    
Sbjct: 556 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 615

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GL +   T  A  +F EM        +       TY  ++ GLC+    D+A  
Sbjct: 616 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSI------HTYGVVLGGLCRNNCTDEANM 669

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL ++   N+K +++T+  VI          EAK LF  +   G+ PN+ T+++++  L 
Sbjct: 670 LLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI 729

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           K    +EA  L   + + G   D+   N ++
Sbjct: 730 KEESYEEADNLFISVEKSGHASDSRLLNHIV 760



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 5/140 (3%)

Query: 328 AVELFHTLRILKCEFD----IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
           A+ELF  +    C       I  YN LID   +  R ++ L +   L    L P+  +YS
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I G   DG++DKA  LFL+M E  V+P ++  + +I+   ++ E  K   ++ KM + 
Sbjct: 196 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 444 NVMPDASIVSIVVDLLAKNE 463
            + PD    S+++D L K++
Sbjct: 255 GIAPDLFTYSLIIDGLCKSK 274


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/463 (33%), Positives = 242/463 (52%), Gaps = 40/463 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           G ++ GF  LG+I+K+    DAV FT L++ LCA+ R  +A  +   ++   GC PDVF+
Sbjct: 27  GCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFS 86

Query: 61  YTTLVNGLCR-------------------------TSHTIVALNLFEEMANGNGEFGVVC 95
           Y+TL+ GLC                           S++ V    F+E   G   + + C
Sbjct: 87  YSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKA-YTLFC 145

Query: 96  E-------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           +       PN VT  ++IDGLCK   +DKA+ +L QM D++I PN  TY S+I G+  + 
Sbjct: 146 KMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSG 205

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            W EA R+  EM   G +PNVVT+N+++D LCK+G   EA  + + MIQ G +PDA TY 
Sbjct: 206 QWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYG 265

Query: 209 TLLDGFCLTG---RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           +LL G+   G    +N+ K+L V        HT   +SI I  YCK   ++ A   + +M
Sbjct: 266 SLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHT---FSIEIYAYCKCGRLDEASLTFIKM 322

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
              G  PD+V + T+  GL +I +++ A   F +M  +G++ +  T+ T I G    G  
Sbjct: 323 QQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKW 382

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +A ELF+ +       D+  + ++ID L K G++  A +LF  +P     PNVV+Y+ M
Sbjct: 383 EKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTM 442

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           I G    G++ +   L  DM    + P  +TF+ L+ G + + 
Sbjct: 443 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMG 485



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 221/440 (50%), Gaps = 15/440 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD  TF  LI   C    +    A   ++   G   D   +T L+  LC    T  A+N
Sbjct: 10  APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMN 69

Query: 80  L-FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVT 136
           +    M     E G  C P+  +Y+T++ GLC E   ++A EL+  M +   N  P+VV+
Sbjct: 70  IVLRRMP----ELG--CTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVS 123

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y++VI GF    D  +A  LF +M+D G+ PNVVT N ++D LCK   MD+A  +L  MI
Sbjct: 124 YSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI 183

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
              + P+  TYN+L+ G+  +G+   A  +   M   G +  V +Y++LI+  CK+    
Sbjct: 184 DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHA 243

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  +++ M+  G KPD   + +L  G      +     + D M +NG+ ++  T+   I
Sbjct: 244 EAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEI 303

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
              CK G + EA   F  ++ L    DI  Y ++IDGLCK GRL+ A+  F  +    L 
Sbjct: 304 YAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLS 363

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN++T++ +I G    G+ +KA +LF +M +  + P+V  F  +I    R+ +  KV E 
Sbjct: 364 PNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMID---RLFKEGKVTE- 419

Query: 437 LHKMKEINVMPDASIVSIVV 456
               K  ++MP A     VV
Sbjct: 420 --AQKLFDLMPRAGAKPNVV 437



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 194/403 (48%), Gaps = 38/403 (9%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+  T+  +I   C  G ++     L Q+    ++ + V +T ++R  C  K  ++A  +
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 157 FIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDG 213
            +  M + G  P+V +++ ++  LC   K +EA+ L+ +M + G    PD  +Y+T++ G
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           F   G V  A  LF  M   G    V + + +I+G CK + ++ A ++  +M+ + I P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +N+L  G     Q   A ++  EM R+G   +  TY   ID LCK+G+  EA E+F+
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRL--------------------EIALELFRSLPCG 373
           ++     + D   Y SL+ G    G L                      ++E++    CG
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 374 VL---------------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            L               +P++VTY+ +I GLC  G++D A   F  M ++ + PN+ITF 
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            LI GF    +  K  EL ++M +  + PD +I + ++D L K
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFK 413



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 158/326 (48%), Gaps = 50/326 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +    +L  + +    P+ VT+  LI  LC      EA  +F  +   G +PD  TY
Sbjct: 205 GQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTY 264

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG----------EFGVVCE--------------- 96
            +L++G   T   +V +N  +++   NG          E    C+               
Sbjct: 265 GSLLHGYA-TEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQ 323

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+ VTYTT+IDGLCK G +D A     QM D  + PN++T+T++I GF     W 
Sbjct: 324 QLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWE 383

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A+ LF EMMD+G+ P+V  F  ++D L K GK+ EA +L DLM + G +P+  +YNT++
Sbjct: 384 KAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMI 443

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY-------------------CKN 252
            G+ + G V    +L   M  +G K T  +++ L++G                    C++
Sbjct: 444 HGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCED 503

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHN 278
             IE  L+L+ EML K  K D +  N
Sbjct: 504 GRIEDILTLFREMLGKADKTDTITEN 529



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 3/227 (1%)

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL-F 297
           + ++ ILI+  C    +    +   +++  G++ D V    L   L    +   A  +  
Sbjct: 13  IATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVL 72

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL--KCEFDIRAYNSLIDGLC 355
             M   G   D ++Y T + GLC      EA EL H +      C  D+ +Y+++I G  
Sbjct: 73  RRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFF 132

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K G +  A  LF  +    + PNVVT + +I GLC    MDKA  +   M +  ++PN  
Sbjct: 133 KEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCT 192

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T++ LI G++   + ++ + +L +M      P+    ++++D L K+
Sbjct: 193 TYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKS 239



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 22/211 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+        +++    +P+ +TFT+LI G     +  +A  LF ++   G  PDV  
Sbjct: 344 IGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTI 403

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T +++ L +      A  LF+ M           +PN V+Y T+I G    G V +  +
Sbjct: 404 FTAMIDRLFKEGKVTEAQKLFDLMPRAGA------KPNVVSYNTMIHGYFIAGEVGEVMK 457

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M    +KP  VT+ +++ G                M+  G++P+V T   ++D  C
Sbjct: 458 LLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKTLIDSCC 501

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           ++G++++   L   M+    + D  T N  L
Sbjct: 502 EDGRIEDILTLFREMLGKADKTDTITENIKL 532


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 249/463 (53%), Gaps = 9/463 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCA--ESRIMEAAALFTKLRVFGCEPDVF 59
           GR +    +   ++     PD +++++++ G     +S + +   +F  +   G  P+  
Sbjct: 364 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 423

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            +  L+N   R      A+ +FE+M N     G++  P+TVT+ T+I  LC+ G +D A 
Sbjct: 424 VFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDDAL 477

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP-NVVTFNVIMDE 178
                M D  + P+   Y  +I+G C   +  +AK L  EMM++ + P  V  F+ I++ 
Sbjct: 478 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 537

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK G++ E   ++D+M+Q G RP+  T+N+L++G+CL G +  A  L  +M S+G +  
Sbjct: 538 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 597

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            + Y  L++GYCKN  I+ AL+++ +ML KG+KP  V+++ +  GLF+  +   A K+F 
Sbjct: 598 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 657

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM  +G      TY   + GLC+N    EA  L   L  +  +FDI  +N +I  + K G
Sbjct: 658 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 717

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R + A ELF ++    LVPN+ TYS+MI  L  +   ++A +LF+ +E++    +    +
Sbjct: 718 RRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLN 777

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++R  +   E +K    L  + E N+  +AS +S++  L ++
Sbjct: 778 HIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSR 820



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 229/461 (49%), Gaps = 18/461 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G  ++GR+LK+   PD  ++ SLI G   +  + +A  LF ++   G  P +    
Sbjct: 191 RPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICN 249

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +++  LC+      A ++ ++M +     G+   P+  TY+ IIDGLCK   +DKA+ +L
Sbjct: 250 SIIKELCKMKEMDKAESIVQKMVDS----GIA--PDLFTYSLIIDGLCKSKAMDKAERVL 303

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM +   +PN +TY S+I G+  +  WNE+ R+F +M   GV P V   N  +  L K+
Sbjct: 304 EQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH 363

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF------CLTGRVNHAKELFVSMESMGCK 236
           G+ +EA  + D M+  G +PD  +Y+T+L G+      CL    N    +F  M + G  
Sbjct: 364 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN----IFNLMLTKGIA 419

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
                ++ILIN Y +   ++ A+ ++ +M +KG+ PD V   T+   L  I +++ A   
Sbjct: 420 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 479

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD-IRAYNSLIDGLC 355
           F+ M   GV      Y   I G C +G +V+A EL   +         ++ ++S+I+ LC
Sbjct: 480 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 539

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K GR+    ++   +      PNVVT++ ++ G C  G M++A  L   M    + PN  
Sbjct: 540 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 599

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +  L+ G+ +       + +   M    V P + + SI++
Sbjct: 600 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 640



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 228/464 (49%), Gaps = 51/464 (10%)

Query: 42  AAALFTKLRVFGCE----PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCE 96
           A  LF ++  + C     P + TY  L++   R     + L +   +  NG G       
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG------- 208

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+  +Y+ +I G  K+G VDKA  L L+M ++ + P ++   S+I+  C  K+ ++A+ +
Sbjct: 209 PDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +M+D G+ P++ T+++I+D LCK+  MD+A R+L+ M++ G RP++ TYN+L+ G+ +
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 217 T-----------------------------------GRVNHAKELFVSMESMGCKHTVFS 241
           +                                   GR N AK +F SM   G K  + S
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387

Query: 242 YSILINGYCKNKE--IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           YS +++GY    +  +    ++++ ML+KGI P+  + N L         +++A  +F++
Sbjct: 388 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 447

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           MQ  G+  DT T+ T I  LC+ G + +A+  F+ +  +        Y  LI G C  G 
Sbjct: 448 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 507

Query: 360 LEIALELFRSLPCGVLVPNVVTY-SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           L  A EL   +    + P  V Y S +I  LC +G++ + +D+   M +    PNV+TF+
Sbjct: 508 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 567

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            L+ G+  +    +   LL  M  I + P+  I   +VD   KN
Sbjct: 568 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 611



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/535 (24%), Positives = 237/535 (44%), Gaps = 79/535 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +   +++    P  +   S+IK LC    + +A ++  K+   G  PD+FTY
Sbjct: 224 GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTY 283

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG------------- 108
           + +++GLC++     A  + E+M     E G    PN++TY ++I G             
Sbjct: 284 SLIIDGLCKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHGYSISGMWNESVRV 337

Query: 109 ----------------------LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                                 L K G  ++AK +   M  K  KP++++Y++++ G+  
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 397

Query: 147 AKD--WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           A D    +   +F  M+ +G+ PN   FN++++   + G MD+A  + + M   G+ PD 
Sbjct: 398 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 457

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            T+ T++   C  GR++ A   F  M  +G   +   Y  LI G C + E+  A  L SE
Sbjct: 458 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 517

Query: 265 MLSK------------------------------------GIKPDVVIHNTLFVGLFEIH 288
           M++K                                    G +P+VV  N+L  G   + 
Sbjct: 518 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 577

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            +E AF L D M   G+  + + Y T +DG CKNG I +A+ +F  +     +     Y+
Sbjct: 578 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 637

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            ++ GL ++ R   A ++F  +       ++ TY +++GGLC +   D+A  L   +   
Sbjct: 638 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 697

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            V  ++ITF+++I    ++    +  EL   +    ++P+    S+++  L K E
Sbjct: 698 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 752



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 12/337 (3%)

Query: 2   GRVSHGFVVLGRIL------KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           G  +HG +V  + L      K    P    F+S+I  LC E R+ E   +   +   G  
Sbjct: 501 GCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR 560

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V T+ +L+ G C   +   A  L + MA+      +  EPN   Y T++DG CK G +
Sbjct: 561 PNVVTFNSLMEGYCLVGNMEEAFALLDAMAS------IGIEPNCYIYGTLVDGYCKNGRI 614

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  +   M  K +KP  V Y+ ++ G   A+    AK++F EM++ G   ++ T+ V+
Sbjct: 615 DDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVV 674

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC+N   DEA+ LL+ +    V+ D  T+N ++      GR   AKELF ++ + G 
Sbjct: 675 LGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGL 734

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + +YS++I    K +  E A +L+  +   G   D  + N +   L    +V +A  
Sbjct: 735 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASN 794

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
               +  N +  +  T         + G   E ++L 
Sbjct: 795 YLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 831



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 6/211 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +L  +      P+   + +L+ G C   RI +A  +F  +   G +P    
Sbjct: 576 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 635

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GL +   T  A  +F EM        +       TY  ++ GLC+    D+A  
Sbjct: 636 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSI------HTYGVVLGGLCRNNCTDEANM 689

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL ++   N+K +++T+  VI          EAK LF  +   G+ PN+ T+++++  L 
Sbjct: 690 LLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI 749

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           K    +EA  L   + + G   D+   N ++
Sbjct: 750 KEESYEEADNLFISVEKSGHASDSRLLNHIV 780



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 5/140 (3%)

Query: 328 AVELFHTLRILKCEFD----IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
           A+ELF  +    C       I  YN LID   +  R ++ L +   L    L P+  +YS
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I G   DG++DKA  LFL+M E  V+P ++  + +I+   ++ E  K   ++ KM + 
Sbjct: 216 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 444 NVMPDASIVSIVVDLLAKNE 463
            + PD    S+++D L K++
Sbjct: 275 GIAPDLFTYSLIIDGLCKSK 294


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/412 (32%), Positives = 217/412 (52%), Gaps = 6/412 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +   +++S  +P+  T+  LI+G C    +      F ++   GC P+V TY T+++  C
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYC 249

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  L   MA           PN ++Y  +I+GLC+EG + +  E+L +M  + 
Sbjct: 250 KLRKIGEAFKLLRLMALKG------LNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+ VT+ ++I G+C   ++++A  L  EM+  G+ PNVVT+  +++ +CK G ++ A 
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             LD M   G+ P+  TY TL+DGF   G +  A ++   M   G   T+ +Y+ LING+
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C    +E A  L  EM+ +G  PDVV ++T+  G     ++E+AF+L  EM   G++ D 
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + I GLCK   + E  +LF  +  L    D   Y SLI+  C  G L+ AL L   
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +      P++VTY+++I G     +  +A+ L L +     VPN IT++ LI
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 236/494 (47%), Gaps = 31/494 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G    G + ++   P+ VT+ ++I   C   +I EA  L   + + G  P++ +Y
Sbjct: 217 GNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NGLCR         + EEM+           P+ VT+ T+I+G C  G   +A  L
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRR------YVPDRVTFNTLINGYCNVGNFHQALVL 330

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + PNVVTYT++I   C A + N A     +M D+G+ PN  T+  ++D   +
Sbjct: 331 HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQ 390

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A +++  M+++G  P   TYN L++G C+ GR+  A  L   M   G    V S
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+G+C+N+E+E A  L  EM++KGI PDV  +++L  GL +  ++     LF EM 
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  TY + I+  C  G + +A+ L   +       DI  YN LI+G  K  R +
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570

Query: 362 IALELFRSLPCGVLVPNVVTYSIMI---------------GGLCNDGQMDKARDLFLDME 406
            A  L   L     VPN +TY+ +I                G C  G M++A  +   M 
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML 630

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN---- 462
           +     N   ++++I G  ++    K   L  +M      P     S+ +  LAK+    
Sbjct: 631 QKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPH----SVTIMALAKSLYHE 686

Query: 463 --EISLNSLPSFTV 474
             E+ LN L  +T+
Sbjct: 687 GKEVELNQLLDYTL 700



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 220/440 (50%), Gaps = 7/440 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIME-AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           F P  +++ +++  +    + ++ A  +F ++   G  P+V+TY  L+ G C   +  + 
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           L  F EM   NG     C PN VTY TIID  CK   + +A +LL  M  K + PN+++Y
Sbjct: 223 LFFFGEMER-NG-----CLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             VI G C      E   +  EM  +   P+ VTFN +++  C  G   +A  L   M++
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +G+ P+  TY TL++  C  G +N A E    M   G      +Y+ LI+G+ +   ++ 
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  +  EM+  G  P ++ +N L  G   + ++E A  L  EM   G   D  +Y T I 
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C+N  + +A +L   +       D+  Y+SLI GLCK  RL    +LF+ +    L P
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + VTY+ +I   C +G +DKA  L  +M +    P+++T+++LI GF + +   +   LL
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576

Query: 438 HKMKEINVMPDASIVSIVVD 457
            K+     +P+    + ++D
Sbjct: 577 LKLLYEESVPNEITYNTLID 596



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 237/485 (48%), Gaps = 37/485 (7%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++   F +L  +      P+ +++  +I GLC E ++ E + +  ++      PD  T+ 
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+NG C   +   AL L  EM   NG       PN VTYTT+I+ +CK G +++A E L
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVK-NG-----LSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM+D+ + PN  TYT++I GF       +A ++  EM++ G  P ++T+N +++  C  
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+M++AS LL  MI+ G  PD  +Y+T++ GFC    +  A +L V M + G    V +Y
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI G CK + +     L+ EMLS G+ PD V + +L         +++A +L DEM +
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID---------- 352
            G + D  TY   I+G  K     EA  L   L   +   +   YN+LID          
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606

Query: 353 -----GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
                G C  G +  A  +  S+       N   Y+++I G    G ++KA +L+ +M  
Sbjct: 607 LALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLH 666

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI--NVMPDASIVS--IVVDLLAKNE 463
           +   P+ +T   L +             L H+ KE+  N + D ++ S  I    LAK  
Sbjct: 667 SGFAPHSVTIMALAKS------------LYHEGKEVELNQLLDYTLKSCRITEAALAKVL 714

Query: 464 ISLNS 468
           I +NS
Sbjct: 715 IGINS 719



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 185/368 (50%), Gaps = 1/368 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE-A 153
           C+ ++  +  ++    +   ++KA  ++   K     P V++Y +++      K   + A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           + +F EM++ GV PNV T+N+++   C  G ++        M ++G  P+  TYNT++D 
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDA 247

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +C   ++  A +L   M   G    + SY+++ING C+  +++    +  EM  +   PD
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V  NTL  G   +    +A  L  EM +NG++ +  TY T I+ +CK G +  A+E   
Sbjct: 308 RVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R      + R Y +LIDG  + G L+ A ++ + +      P ++TY+ +I G C  G
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           +M+ A  L  +M E   +P+V+++  +I GF R  E  K  +L  +M    + PD +  S
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 454 IVVDLLAK 461
            ++  L K
Sbjct: 488 SLIQGLCK 495



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 198/424 (46%), Gaps = 50/424 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G      V+   ++K+  +P+ VT+T+LI  +C    +  A     ++R  G  P+  T
Sbjct: 321 VGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRT 380

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMA-NG------------NGE---------FGVVCE-- 96
           YTTL++G  +      A  + +EM  NG            NG           G++ E  
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+ V+Y+TII G C+   ++KA +L ++M  K I P+V TY+S+I+G C  +   
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           E   LF EM+  G+ P+ VT+  +++  C  G +D+A RL D MIQ G  PD  TYN L+
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS-------- 263
           +GF    R   AK L + +          +Y+ LI+  C N E + AL+L          
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSALALMKGFCMKGLM 619

Query: 264 --------EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
                    ML KG K +  ++N +  G  ++  +E+A+ L+ EM  +G A  + T    
Sbjct: 620 NEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL 679

Query: 316 IDGLCKNGYIVEAVELF-HTLRILKCEFDIRAYNSLIDGL-CKSGRLEIALELFRSLPCG 373
              L   G  VE  +L  +TL+   C     A   ++ G+  K G ++    + + +   
Sbjct: 680 AKSLYHEGKEVELNQLLDYTLK--SCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALS 737

Query: 374 VLVP 377
            L+P
Sbjct: 738 GLLP 741



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 1/301 (0%)

Query: 164 GVQPNVVTFNVIMDELCKNGK-MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
           G  P V+++N I+D + +  + +  A  +   M++ GV P+ +TYN L+ GFC  G +  
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
               F  ME  GC   V +Y+ +I+ YCK ++I  A  L   M  KG+ P+++ +N +  
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
           GL    Q++   ++ +EM +     D  T+ T I+G C  G   +A+ L   +       
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           ++  Y +LI+ +CK+G L  A+E    +    L PN  TY+ +I G    G + +A  + 
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +M EN   P +IT++ LI G   +        LL +M E   +PD    S ++    +N
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461

Query: 463 E 463
           +
Sbjct: 462 Q 462


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/447 (32%), Positives = 230/447 (51%), Gaps = 13/447 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD V FT +I GLC E R+ EA ++  +    GCEPD  TY   ++GLC+      A  
Sbjct: 38  SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 97

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L ++M          C P TVTYT ++DGL K G +D+A  +L QM +K   P + TYT 
Sbjct: 98  LLKKMDEKK------CLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTV 151

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           VI G   A    EA+R+F++M+  G +P+   +  ++  L K GK+DEA   L+ M+++G
Sbjct: 152 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENG 211

Query: 200 ----VRPDAFTYNTLLDGFCLTGRVNHAKELFVSME-SMGCKHTVFSYSILINGYCKNKE 254
               V PD   +N ++   C +G +  A   F  ++ S+   H  F+++ L+   CK + 
Sbjct: 212 CARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTH--FTFNPLVAALCKAER 269

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            E A++   +M  +   P +  + +L  G  ++ +++ A     E    G   D  TY +
Sbjct: 270 TEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTS 329

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            IDGLCK G + E  E FH +R    E D   Y +LIDG  K+  +  A  ++R +    
Sbjct: 330 IIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 389

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
            V + VTY+I++ GLC  G++ +A   FL MEE   V  V+T+  L+ GF      S  +
Sbjct: 390 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 449

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
           EL  +M +    P+    +I++  L +
Sbjct: 450 ELFRRMLDRGCEPNLVSYNIIIRGLCR 476



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 241/455 (52%), Gaps = 19/455 (4%)

Query: 1   MGRVSHGFVVLGRILKS-C---FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           +G++    V L +++++ C     PD V    +I+ LCA   + +A A F +L     + 
Sbjct: 194 IGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD-SLDL 252

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
             FT+  LV  LC+   T  A+   ++M+         C P   TYT+++DG  K G +D
Sbjct: 253 THFTFNPLVAALCKAERTEEAIAFVKKMSERR------CFPTLFTYTSLVDGFLKLGRLD 306

Query: 117 KAKELLLQMKD---KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
           +A   LLQ+K+   +   P+ VTYTS+I G C      E    F EM ++G +P+ VT+ 
Sbjct: 307 EA---LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 363

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            ++D   K   + +A R+   M+Q G      TYN +LDG C  GRV  A   F++ME  
Sbjct: 364 ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEER 423

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GC  TV +YS L++G+C    +  A+ L+  ML +G +P++V +N +  GL    ++ +A
Sbjct: 424 GCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKA 483

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKN-GYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           +  F+++ +  +  D +T+ +F+ GLC+    + + VELF ++       ++ +Y+ L+D
Sbjct: 484 YFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMD 543

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G+C++G LE+ LE+F  +    + P+VV ++ +I  LC  G++D+A ++F ++E  +  P
Sbjct: 544 GICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-AP 602

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           +  ++  L+    R     +   L   MK     P
Sbjct: 603 DAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 223/461 (48%), Gaps = 8/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L ++++   +P   T+T +I GL    R+ EA  +F  +   GC PD F Y
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GL +      AL    +M       GV  EP+ V +  +I  LC  G ++ A   
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGV--EPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++ D ++     T+  ++   C A+   EA     +M ++   P + T+  ++D   K
Sbjct: 243 FDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLK 301

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA   L   ++ G  PDA TY +++DG C  GRV    E F  M + G +    +
Sbjct: 302 LGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 361

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+ K K I  A  +Y +ML  G     V +N +  GL +  +V  A+  F  M+
Sbjct: 362 YAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAME 421

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G  A   TY   +DG C  G +  AVELF  +    CE ++ +YN +I GLC++G+L 
Sbjct: 422 ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLA 481

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD---LFLDMEENAVVPNVITFD 418
            A   F  L    L P+V T++  + GLC   ++D   D   LF  M      PN+ ++ 
Sbjct: 482 KAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ--RLDTVGDGVELFESMVSQGTSPNLHSYS 539

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +L+ G  R       +E+ H+M    V PD  + + ++  L
Sbjct: 540 ILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWL 580



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 217/426 (50%), Gaps = 14/426 (3%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D    T L+NGLC+T     A+ L +EM          C P+ V +T +I+GLC+E  +D
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMP---------CSPDMVAFTVVINGLCREKRLD 58

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  +L +      +P+ VTY   I G C A+  ++A +L  +M ++   P  VT+  ++
Sbjct: 59  EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALV 118

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D L K G++DEA  +L+ M++ G  P   TY  ++DG    GRV  A+ +FV M   GC+
Sbjct: 119 DGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCR 178

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEML----SKGIKPDVVIHNTLFVGLFEIHQVER 292
              F Y+ LI+G  K  +++ AL   ++M+    ++G++PDVVIHN +   L     +E 
Sbjct: 179 PDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLED 238

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A   FDE+  + +    +T+   +  LCK     EA+     +   +C   +  Y SL+D
Sbjct: 239 ALAYFDELD-DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G  K GRL+ AL   +       +P+ VTY+ +I GLC  G++++  + F +M      P
Sbjct: 298 GFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP 357

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           + +T+  LI GF++     K   +  +M +   +      +I++D L K      +  +F
Sbjct: 358 DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF 417

Query: 473 TVHEQQ 478
              E++
Sbjct: 418 LAMEER 423


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/428 (33%), Positives = 228/428 (53%), Gaps = 7/428 (1%)

Query: 14  ILKSCFTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++ SC  P + +T+  LI GLC   ++ +AA +   +   GC+P+  T+  L+ G CR  
Sbjct: 70  VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 129

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           +   AL L +EM   N        P+ V+Y  +I+GLC    +  A +LL +M    +KP
Sbjct: 130 NMGRALELLDEMEKRN------LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 183

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           NVV Y+++I G+       EA+RL   M   GV P++  +N I+  L K GKM+EAS  L
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 243

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             +   G++PDA T+   + G+  TG++  A + F  M   G       Y++LING+ K 
Sbjct: 244 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 303

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +  ALS++  + + G+ PDV   +    GL +  +V+ A K+F E++  G+  D +TY
Sbjct: 304 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 363

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            + I G CK G + +A EL   + +     +I  YN+L+DGLCKSG ++ A +LF  +P 
Sbjct: 364 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 423

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L P+ VTYS MI G C    + +A  LF +M    V P+   ++ L+ G  +  +  K
Sbjct: 424 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 483

Query: 433 VIELLHKM 440
            + L  +M
Sbjct: 484 AMNLFREM 491



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 236/466 (50%), Gaps = 17/466 (3%)

Query: 6   HGFVVLGR------ILKSCFT----PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG    G+      ILK   T    P++ TF  LI+G C E  +  A  L  ++      
Sbjct: 88  HGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 147

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P   +Y  ++NGLC      +A  L E+M           +PN V Y+T+I G   EG +
Sbjct: 148 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVVYSTLIMGYASEGRI 201

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           ++A+ LL  M    + P++  Y ++I     A    EA    +E+  +G++P+ VTF   
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 261

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +    K GKM EA++  D M+ HG+ P+   Y  L++G    G +  A  +F  + ++G 
Sbjct: 262 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 321

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V + S  I+G  KN  ++ AL ++SE+  KG+ PDV  +++L  G  +  +VE+AF+
Sbjct: 322 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 381

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L DEM   G+A + + Y   +DGLCK+G I  A +LF  +     E D   Y+++IDG C
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS  +  A  LF  +P   + P+   Y+ ++ G C +G M+KA +LF +M +       +
Sbjct: 442 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTL 500

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +F+ LI G+ +  +  +  +L  +M    +MPD    + V+D   K
Sbjct: 501 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 546



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 230/473 (48%), Gaps = 41/473 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD--------------------- 57
             P+  T+T +  GLC   R+ EA   F +++  G +PD                     
Sbjct: 6   LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL 65

Query: 58  --------------VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
                         + TY  L++GLC+      A  + + M        + C+PN+ T+ 
Sbjct: 66  RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT------LGCKPNSRTFC 119

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
            +I+G C+E  + +A ELL +M+ +N+ P+ V+Y ++I G C+ KD + A +L  +M   
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G++PNVV ++ ++      G+++EA RLLD M   GV PD F YN ++      G++  A
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
               + ++  G K    ++   I GY K  ++  A   + EML  G+ P+  ++  L  G
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            F+   +  A  +F  +   GV  D  T   FI GL KNG + EA+++F  L+      D
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y+SLI G CK G +E A EL   +    + PN+  Y+ ++ GLC  G + +AR LF 
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            M E  + P+ +T+  +I G+ +    ++   L H+M    V P + + + +V
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 472



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 237/472 (50%), Gaps = 24/472 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  +  S   PD   + ++I  L    ++ EA+    +++  G +PD  T+
Sbjct: 199 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 258

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              + G  +T     A   F+EM +     G++  PN   YT +I+G  K G + +A  +
Sbjct: 259 GAFILGYSKTGKMTEAAKYFDEMLD----HGLM--PNNPLYTVLINGHFKAGNLMEALSI 312

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +    + P+V T ++ I G        EA ++F E+ ++G+ P+V T++ ++   CK
Sbjct: 313 FRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 372

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++++A  L D M   G+ P+ F YN L+DG C +G +  A++LF  M   G +    +
Sbjct: 373 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 432

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+GYCK++ +  A SL+ EM SKG++P   ++N L  G  +   +E+A  LF EM 
Sbjct: 433 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 492

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G A  T ++ T IDG CK+  I EA +LF  +   +   D   Y ++ID  CK+G++E
Sbjct: 493 QKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 551

Query: 362 IALELFRSLPCGVLV-----------------PNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            A  LF+ +    L+                 P+ VTY ++I   C +  + +A  L  +
Sbjct: 552 EANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 611

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +    ++      D+LI    +  + ++  +LL +M E+ + P  +  S +V
Sbjct: 612 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 663



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 208/398 (52%), Gaps = 24/398 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T ++ I GL    R+ EA  +F++L+  G  PDVFTY++L++G C+      A  L
Sbjct: 323 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 382

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM       G+   PN   Y  ++DGLCK G + +A++L   M +K ++P+ VTY+++
Sbjct: 383 HDEMCLK----GIA--PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 436

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C +++  EA  LF EM  +GVQP+   +N ++   CK G M++A  L   M+Q G 
Sbjct: 437 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 496

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA-- 258
                ++NTL+DG+C + ++  A +LF  M +        +Y+ +I+ +CK  ++E A  
Sbjct: 497 -ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 555

Query: 259 ---------------LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
                           +L+ +M++KG+KPD V +  +     +   +  AFKL DE+   
Sbjct: 556 LFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 615

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+      +   I  LCK   + EA +L   +  L  +  + A ++L+    ++G+++ A
Sbjct: 616 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 675

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
             +F  +    LVP+  T   ++ G  ND   + AR+L
Sbjct: 676 TRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 713



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 217/439 (49%), Gaps = 24/439 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++        +L     P+   +T LI G      +MEA ++F  L   G  PDV T 
Sbjct: 269 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 328

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +  ++GL +      AL +F E+     E G+V  P+  TY+++I G CK+G V+KA EL
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELK----EKGLV--PDVFTYSSLISGFCKQGEVEKAFEL 382

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K I PN+  Y +++ G C + D   A++LF  M ++G++P+ VT++ ++D  CK
Sbjct: 383 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 442

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +  + EA  L   M   GV+P +F YN L+ G C  G +  A  LF  M   G   T  S
Sbjct: 443 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLS 501

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+GYCK+ +I+ A  L+ EM++K I PD V + T+     +  ++E A  LF EMQ
Sbjct: 502 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561

Query: 302 -RN----------------GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            RN                GV  D  TY   I   CK   +VEA +L   +         
Sbjct: 562 ERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 621

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             ++ LI  LCK   L  A +L   +    L P++   S ++      G+MD+A  +F  
Sbjct: 622 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 681

Query: 405 MEENAVVPNVITFDMLIRG 423
           ++   +VP+  T   L+ G
Sbjct: 682 VKSLGLVPDTTTLIDLVNG 700



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 182/386 (47%), Gaps = 24/386 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     V   + +    PD  T++SLI G C +  + +A  L  ++ + G  P++F Y
Sbjct: 339 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 398

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+GLC++     A  LF+ M     E G+  EP++VTY+T+IDG CK   V +A  L
Sbjct: 399 NALVDGLCKSGDIQRARKLFDGMP----EKGL--EPDSVTYSTMIDGYCKSENVAEAFSL 452

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K ++P+   Y +++ G C   D  +A  LF EM+ +G     ++FN ++D  CK
Sbjct: 453 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCK 511

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME---------- 231
           + K+ EAS+L   MI   + PD  TY T++D  C  G++  A  LF  M+          
Sbjct: 512 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVF 571

Query: 232 -------SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
                  + G K    +Y ++I  +CK   +  A  L  E++ KG+     IH+ L   L
Sbjct: 572 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 631

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +   +  A KL DEM   G+        T +    + G + EA  +F  ++ L    D 
Sbjct: 632 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 691

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSL 370
                L++G       E A  L + L
Sbjct: 692 TTLIDLVNGNLNDTDSEDARNLIKQL 717



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 169/349 (48%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M +K + PN  TYT +  G C AK  NEAK  F EM   G++P+    + ++D   + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +DE  R+ D+M+  G+  +  TYN L+ G C  G++  A E+   M ++GCK    ++ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI GYC+   +  AL L  EM  + + P  V +  +  GL     +  A KL ++M  +G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  +   Y T I G    G I EA  L   +       DI  YN++I  L K+G++E A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
                +    L P+ VT+   I G    G+M +A   F +M ++ ++PN   + +LI G 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
            +     + + +   +  + V+PD    S  +  L KN     +L  F+
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS 349



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 45/291 (15%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD+VT++++I G C    + EA +LF ++   G +P  F Y  LV+G C+      A+NL
Sbjct: 428 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 487

Query: 81  FEEMANG--------NGEFGVVCE--------------------PNTVTYTTIIDGLCKE 112
           F EM           N      C+                    P+ VTYTT+ID  CK 
Sbjct: 488 FREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 547

Query: 113 GFVDKAKELLLQMKDKN-----------------IKPNVVTYTSVIRGFCYAKDWNEAKR 155
           G +++A  L  +M+++N                 +KP+ VTY  VI   C   +  EA +
Sbjct: 548 GKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 607

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           L  E++ +G+       ++++  LCK   + EAS+LLD M + G++P     +TL+  F 
Sbjct: 608 LRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFH 667

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
             G+++ A  +F  ++S+G      +   L+NG   + + E A +L  +++
Sbjct: 668 EAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 147/451 (32%), Positives = 231/451 (51%), Gaps = 30/451 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV+    +L  +      PDA TF  +I GLC   RI EAA +  ++ + G  PD  TY 
Sbjct: 261 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYG 320

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNG----------------------------EFGVV 94
            L+NGLC+      A +LF  +                                  +G+V
Sbjct: 321 YLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 380

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
             P+  TY ++I G  K+G V  A E+L  M++K  KPNV +YT ++ GFC     +EA 
Sbjct: 381 --PDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 438

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  EM   G++PN V FN ++   CK  ++ EA  +   M + G +PD +T+N+L+ G 
Sbjct: 439 NLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 498

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C    + HA  L   M S G      +Y+ LIN + +  EI+ A  L +EM+ +G   D 
Sbjct: 499 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDE 558

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +N+L  GL    +V++A  LF++M R+G+   + +    I+GLC++G + EAVE    
Sbjct: 559 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKE 618

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           + +     DI  +NSLI+GLC++GR+E  L +FR L    + P+ VTY+ ++  LC  G 
Sbjct: 619 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGF 678

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           +  A  L  +  E+  VPN  T+ +L++  +
Sbjct: 679 VYDACLLLDEGIEDGFVPNDRTWSILLQSLV 709



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 236/459 (51%), Gaps = 11/459 (2%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V     VL  + K    P++V + +LI  L   +R+ EA  L  ++ + GC PD  T+  
Sbjct: 227 VDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 286

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           ++ GLC+       +N   +M N     G    P+ +TY  +++GLCK G VD AK+L  
Sbjct: 287 VILGLCKFDR----INEAAKMVNRMLIRGFT--PDDITYGYLMNGLCKIGRVDAAKDLFY 340

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKN 182
           ++     KP  V + ++I GF      ++AK +  +M+   G+ P+V T+N ++    K 
Sbjct: 341 RIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKK 396

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +  A  +L  M   G +P+ ++Y  L+DGFC  G+++ A  L   M + G K     +
Sbjct: 397 GLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGF 456

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+ +CK   I  A+ ++ EM  KG KPDV   N+L  GL E+ +++ A  L  +M  
Sbjct: 457 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 516

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV A+T TY T I+   + G I EA +L + +       D   YNSLI GLC++G ++ 
Sbjct: 517 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDK 576

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  LF  +    LVP+ ++ +I+I GLC  G +++A +   +M      P+++TF+ LI 
Sbjct: 577 ARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 636

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           G  R       + +  K++   + PD    + ++  L K
Sbjct: 637 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 226/454 (49%), Gaps = 18/454 (3%)

Query: 13  RILKSC---FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           R + SC   F    V    L+ G C +     AA +F  +      P +FT+  ++  LC
Sbjct: 167 RNVYSCEPTFKSYNVVLEILVSGNCHKV----AANVFYDMLSRKIPPTLFTFGVVMKALC 222

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
             +    AL++  +M          C PN+V Y T+I  L K   V++A +LL +M    
Sbjct: 223 AVNEVDSALSVLRDMTKHG------CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 276

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+  T+  VI G C     NEA ++   M+ +G  P+ +T+  +M+ LCK G++D A 
Sbjct: 277 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAK 336

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILING 248
            L   +     +P +  +NTL+ GF   GR++ AK +   M  S G    V +Y+ LI G
Sbjct: 337 DLFYRI----PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 392

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           Y K   +  AL +  +M +KG KP+V  +  L  G  ++ +++ A+ L +EM  +G+  +
Sbjct: 393 YWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPN 452

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T  +   I   CK   I EAVE+F  +    C+ D+  +NSLI GLC+   ++ AL L R
Sbjct: 453 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 512

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    +V N VTY+ +I      G++ +AR L  +M     + + IT++ LI+G  R  
Sbjct: 513 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAG 572

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           E  K   L  KM    ++P +   +I+++ L ++
Sbjct: 573 EVDKARSLFEKMLRDGLVPSSISCNILINGLCRS 606



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 181/397 (45%), Gaps = 34/397 (8%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKD-KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           + +I+    K GF  +   L+L+M++  + +P   +Y  V+           A  +F +M
Sbjct: 143 FISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM 202

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + + + P + TF V+M  LC   ++D A  +L  M +HG  P++  Y TL+       RV
Sbjct: 203 LSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 262

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A +L   M  MGC     +++ +I G CK   I  A  + + ML +G  PD + +  L
Sbjct: 263 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYL 322

Query: 281 FVGLFEIHQVERAFKLF--------------------------------DEMQRNGVAAD 308
             GL +I +V+ A  LF                                D +   G+  D
Sbjct: 323 MNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 382

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY + I G  K G +  A+E+   +R   C+ ++ +Y  L+DG CK G+++ A  L  
Sbjct: 383 VCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLN 442

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L PN V ++ +I   C + ++ +A ++F +M      P+V TF+ LI G   ++
Sbjct: 443 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 502

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVD-LLAKNEI 464
           E    + LL  M    V+ +    + +++  L + EI
Sbjct: 503 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 539



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 159/361 (44%), Gaps = 54/361 (14%)

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV---------------------- 200
           +G + +   + V++ +L  NG+     RLL  M   G+                      
Sbjct: 99  KGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQ 158

Query: 201 --------------RPDAFTYNTLLDGFCLTGRVNH-AKELFVSMESMGCKHTVFSYSIL 245
                          P   +YN +L+   ++G  +  A  +F  M S     T+F++ ++
Sbjct: 159 TTRLMLEMRNVYSCEPTFKSYNVVLE-ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 217

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           +   C   E++ ALS+  +M   G  P+ VI+ TL   L + ++V  A +L +EM   G 
Sbjct: 218 MKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 277

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D  T+   I GLCK   I EA ++ + + I     D   Y  L++GLCK GR++ A +
Sbjct: 278 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKD 337

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDMLIRGF 424
           LF  +P     P  V ++ +I G    G++D A+ +  DM     +VP+V T++ LI G+
Sbjct: 338 LFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 393

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK-----------NEISLNSLPSFT 473
            +       +E+L  M+     P+    +I+VD   K           NE+S + L   T
Sbjct: 394 WKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNT 453

Query: 474 V 474
           V
Sbjct: 454 V 454



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D +T+ SLIKGLC    + +A +LF K+   G  P   +   L+NGLCR+     A+   
Sbjct: 557 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQ 616

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM            P+ VT+ ++I+GLC+ G ++    +  +++ + I P+ VTY +++
Sbjct: 617 KEMVLRGST------PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLM 670

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
              C      +A  L  E ++ G  PN  T+++++  L     +D  +
Sbjct: 671 SWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRT 718


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 233/462 (50%), Gaps = 12/462 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+ H   V  R +     PD +T+T L+ GL    R+ +A  +  ++      PD  T 
Sbjct: 19  GRLRHALGVY-RQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTL 77

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +V  LC       A  L EEM +           N +TY+ ++DGLCK   +D+A  L
Sbjct: 78  TVVVQSLCLGDRVDDARELVEEMLHRG------MAANAITYSALVDGLCKCERLDEAVAL 131

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M ++   P VVTY S+I GFC A+  +EA     +M+ +G  P+++T+  ++   CK
Sbjct: 132 VETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCK 191

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +  +     LL  + + G  PD  TY+T++DG C  GR+  A ++F   E M C  T  +
Sbjct: 192 SRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF---EEMSCAPTAIT 248

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI GYC+  +++ A+ L  +M+     PDVV + TL     ++ +++ A++LF +M 
Sbjct: 249 YNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMV 308

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            N ++ D  T+ + +DGLC  G + +A+EL   +    C   I  YN ++DG CK+ ++ 
Sbjct: 309 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVR 368

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF--LDMEENAVVPNVITFDM 419
            A EL         VPN VTY+I++ G C  G+ D+A      L+ E      +V  + +
Sbjct: 369 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 428

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++    R       ++   +M +   +P A+  + VV  L K
Sbjct: 429 ILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCK 470



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 232/459 (50%), Gaps = 17/459 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     VL  ++ +   PD  T T +++ LC   R+ +A  L  ++   G   +  TY+
Sbjct: 54  RLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYS 113

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LV+GLC+      A+ L E MA    E G  C P  VTY +II G C+   VD+A   +
Sbjct: 114 ALVDGLCKCERLDEAVALVETMA----ERG--CAPTVVTYNSIITGFCRARRVDEAHGFM 167

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM  +   P+++TYT++I GFC ++D      L  E+  +G  P++VT++ ++D LCK 
Sbjct: 168 EQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKA 227

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++ +A   +D+  +    P A TYN+L+ G+C  G ++ A  L   M    C   V +Y
Sbjct: 228 GRLRDA---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTY 284

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + L++ +CK   ++ A  L+ +M++  + PDVV   +L  GL    ++E A +L +E+ R
Sbjct: 285 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 344

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G     +TY   +DG CK   + +A EL    R      +   YN L+ G C++GR + 
Sbjct: 345 RGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 404

Query: 363 ALELFRSL-----PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           AL+    L     PC     +V  Y+I++  LC DG+ D A   + +M +   VP   TF
Sbjct: 405 ALQYLDQLNSEGGPCPT---SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 461

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
             ++    + ++P +  ELL +M +    P       VV
Sbjct: 462 ATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVV 500



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 216/442 (48%), Gaps = 13/442 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     ++  +L      +A+T+++L+ GLC   R+ EA AL   +   GC P V TY 
Sbjct: 89  RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYN 148

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +++ G CR      A    E+M A G       C P+ +TYT +I G CK   V +  EL
Sbjct: 149 SIITGFCRARRVDEAHGFMEQMVAEG-------CHPDIITYTALIGGFCKSRDVGRGLEL 201

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++  +   P++VTY++VI G C A    +A  +F EM      P  +T+N ++   C+
Sbjct: 202 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCR 258

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G MDEA RLL  M+     PD  TY TL+  FC  GR++ A ELF  M +      V +
Sbjct: 259 AGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 318

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ L++G C    +E AL L  E+  +G  P +  +N +  G  + +QV +A +L  + +
Sbjct: 319 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFR 378

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL--KCEFDIRAYNSLIDGLCKSGR 359
             G   +T TY   + G C+ G   +A++    L      C   +  Y  ++D LC+ GR
Sbjct: 379 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGR 438

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            + A++ +  +     VP   T++ ++  LC   Q  +A +L  +M +    P   T D 
Sbjct: 439 TDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDA 498

Query: 420 LIRGFIRINEPSKVIELLHKMK 441
           ++  + R     K  EL  +++
Sbjct: 499 VVSAYCRAGMIQKADELASELR 520



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 220/444 (49%), Gaps = 12/444 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  +    +I GLC   R+  A  ++ ++      PD  TYT LV+GL +      A+ +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM +          P+  T T ++  LC    VD A+EL+ +M  + +  N +TY+++
Sbjct: 62  LQEMVSARHV------PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 115

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C  +  +EA  L   M ++G  P VVT+N I+   C+  ++DEA   ++ M+  G 
Sbjct: 116 VDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGC 175

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY  L+ GFC +  V    EL   +   G    + +YS +I+G CK   +  A+ 
Sbjct: 176 HPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ EM      P  + +N+L  G      ++ A +L  +M  +  A D  TY T +   C
Sbjct: 236 IFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFC 292

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + +A ELF  +   K   D+  + SL+DGLC  GR+E ALEL   +      P + 
Sbjct: 293 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 352

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ G C   Q+ KA +L  D      VPN +T+++L+ G  R     + ++ L ++
Sbjct: 353 TYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQL 412

Query: 441 -KEINVMPDA-SIVSIVVDLLAKN 462
             E    P + ++ +I++D L ++
Sbjct: 413 NSEGGPCPTSVAMYAIILDALCRD 436



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 170/336 (50%), Gaps = 11/336 (3%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V  G  +LG + +  FTPD VT++++I GLC   R+ +A  +F ++    C P   TY +
Sbjct: 195 VGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNS 251

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+ G CR      A+ L  +M +        C P+ VTYTT++   CK G +D A EL  
Sbjct: 252 LIGGYCRAGDMDEAIRLLGKMVDDK------CAPDVVTYTTLMSAFCKMGRLDDAYELFQ 305

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           QM    + P+VVT+TS++ G C      +A  L  E+  +G  P + T+N ++D  CK  
Sbjct: 306 QMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKAN 365

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFS 241
           ++ +A  L+      G  P+  TYN L+ G C  GR + A +    + S G  C  +V  
Sbjct: 366 QVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAM 425

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+++  C++   + A+  Y EM+ +G  P      T+   L + HQ ++A +L +EM 
Sbjct: 426 YAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMI 485

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           + G      T    +   C+ G I +A EL   LR+
Sbjct: 486 KYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 521



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 149/329 (45%), Gaps = 37/329 (11%)

Query: 165 VQPNVVTFNVIMDELCKNGK----------------------------MDEASRLLDL-- 194
           + P  +  NV++  LC+ G+                            + +A RL D   
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 195 ----MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
               M+     PD  T   ++   CL  RV+ A+EL   M   G      +YS L++G C
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K + ++ A++L   M  +G  P VV +N++  G     +V+ A    ++M   G   D  
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY   I G CK+  +   +EL   +       DI  Y+++IDGLCK+GRL  A+++F  +
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
            C    P  +TY+ +IGG C  G MD+A  L   M ++   P+V+T+  L+  F ++   
Sbjct: 241 SC---APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLL 459
               EL  +M    + PD    + +VD L
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGL 326



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 8/266 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +LG+++     PD VT+T+L+   C   R+ +A  LF ++      PDV T+
Sbjct: 260 GDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 319

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+LV+GLC       AL L EE+          C P   TY  ++DG CK   V KA+EL
Sbjct: 320 TSLVDGLCGEGRMEDALELLEEITRRG------CPPTIYTYNCVVDGYCKANQVRKAEEL 373

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDEL 179
           +   + +   PN VTY  ++ G C A   ++A +   ++  +G     +V  + +I+D L
Sbjct: 374 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 433

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C++G+ D+A +  + MIQ G  P A T+ T++   C   +   A EL   M   G     
Sbjct: 434 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGP 493

Query: 240 FSYSILINGYCKNKEIEGALSLYSEM 265
            +   +++ YC+   I+ A  L SE+
Sbjct: 494 GTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 8/228 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+   + +  +++ +  +PD VTFTSL+ GLC E R+ +A  L  ++   GC P ++T
Sbjct: 294 MGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYT 353

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +V+G C+ +    A    EE+       G V  PNTVTY  ++ G C+ G  D+A +
Sbjct: 354 YNCVVDGYCKANQVRKA----EELVADFRSRGFV--PNTVTYNILVAGCCRAGRTDQALQ 407

Query: 121 LLLQMKDKN--IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            L Q+  +      +V  Y  ++   C     ++A + + EM+ +G  P   TF  ++  
Sbjct: 408 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 467

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           LCK  +  +A  LL+ MI++G  P   T + ++  +C  G +  A EL
Sbjct: 468 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 1/117 (0%)

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           +N +I GLC++GRL  AL ++R +      P+ +TY+ ++ GL    ++  A  +  +M 
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
               VP+  T  ++++     +      EL+ +M    +  +A   S +VD L K E
Sbjct: 67  SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCE 123


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/428 (33%), Positives = 228/428 (53%), Gaps = 7/428 (1%)

Query: 14  ILKSCFTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++ SC  P + +T+  LI GLC   ++ +AA +   +   GC+P+  T+  L+ G CR  
Sbjct: 269 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 328

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           +   AL L +EM   N        P+ V+Y  +I+GLC    +  A +LL +M    +KP
Sbjct: 329 NMGRALELLDEMEKRN------LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 382

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           NVV Y+++I G+       EA+RL   M   GV P++  +N I+  L K GKM+EAS  L
Sbjct: 383 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 442

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             +   G++PDA T+   + G+  TG++  A + F  M   G       Y++LING+ K 
Sbjct: 443 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 502

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +  ALS++  + + G+ PDV   +    GL +  +V+ A K+F E++  G+  D +TY
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            + I G CK G + +A EL   + +     +I  YN+L+DGLCKSG ++ A +LF  +P 
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L P+ VTYS MI G C    + +A  LF +M    V P+   ++ L+ G  +  +  K
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 682

Query: 433 VIELLHKM 440
            + L  +M
Sbjct: 683 AMNLFREM 690



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 236/466 (50%), Gaps = 17/466 (3%)

Query: 6   HGFVVLGR------ILKSCFT----PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG    G+      ILK   T    P++ TF  LI+G C E  +  A  L  ++      
Sbjct: 287 HGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 346

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P   +Y  ++NGLC      +A  L E+M           +PN V Y+T+I G   EG +
Sbjct: 347 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVVYSTLIMGYASEGRI 400

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           ++A+ LL  M    + P++  Y ++I     A    EA    +E+  +G++P+ VTF   
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +    K GKM EA++  D M+ HG+ P+   Y  L++G    G +  A  +F  + ++G 
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V + S  I+G  KN  ++ AL ++SE+  KG+ PDV  +++L  G  +  +VE+AF+
Sbjct: 521 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 580

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L DEM   G+A + + Y   +DGLCK+G I  A +LF  +     E D   Y+++IDG C
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS  +  A  LF  +P   + P+   Y+ ++ G C +G M+KA +LF +M +       +
Sbjct: 641 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTL 699

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +F+ LI G+ +  +  +  +L  +M    +MPD    + V+D   K
Sbjct: 700 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 745



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 230/471 (48%), Gaps = 41/471 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD----------------------- 57
           P+  T+T +  GLC   R+ EA   F +++  G +PD                       
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266

Query: 58  ------------VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
                       + TY  L++GLC+      A  + + M        + C+PN+ T+  +
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT------LGCKPNSRTFCLL 320

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I+G C+E  + +A ELL +M+ +N+ P+ V+Y ++I G C+ KD + A +L  +M   G+
Sbjct: 321 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 380

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +PNVV ++ ++      G+++EA RLLD M   GV PD F YN ++      G++  A  
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
             + ++  G K    ++   I GY K  ++  A   + EML  G+ P+  ++  L  G F
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +   +  A  +F  +   GV  D  T   FI GL KNG + EA+++F  L+      D+ 
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y+SLI G CK G +E A EL   +    + PN+  Y+ ++ GLC  G + +AR LF  M
Sbjct: 561 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 620

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            E  + P+ +T+  +I G+ +    ++   L H+M    V P + + + +V
Sbjct: 621 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 671



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/447 (32%), Positives = 234/447 (52%), Gaps = 11/447 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + GR LK    PDAVTF + I G     ++ EAA  F ++   G  P+   YT L+NG  
Sbjct: 445 IQGRGLK----PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +  + + AL++F  +       GV+  P+  T +  I GL K G V +A ++  ++K+K 
Sbjct: 501 KAGNLMEALSIFRHLH----ALGVL--PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+V TY+S+I GFC   +  +A  L  EM  +G+ PN+  +N ++D LCK+G +  A 
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 614

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           +L D M + G+ PD+ TY+T++DG+C +  V  A  LF  M S G +   F Y+ L++G 
Sbjct: 615 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 674

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK  ++E A++L+ EML KG    +   NTL  G  +  +++ A +LF EM    +  D 
Sbjct: 675 CKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 733

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY T ID  CK G + EA  LF  ++      D   Y SL+ G  K G+      LF  
Sbjct: 734 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEK 793

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P+ VTY ++I   C +  + +A  L  ++    ++      D+LI    +  +
Sbjct: 794 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 853

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVV 456
            ++  +LL +M E+ + P  +  S +V
Sbjct: 854 LTEASKLLDEMGELGLKPSLAACSTLV 880



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 238/462 (51%), Gaps = 7/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  +  S   PD   + ++I  L    ++ EA+    +++  G +PD  T+
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              + G  +T     A   F+EM     + G++  PN   YT +I+G  K G + +A  +
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEML----DHGLM--PNNPLYTVLINGHFKAGNLMEALSI 511

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +    + P+V T ++ I G        EA ++F E+ ++G+ P+V T++ ++   CK
Sbjct: 512 FRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 571

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++++A  L D M   G+ P+ F YN L+DG C +G +  A++LF  M   G +    +
Sbjct: 572 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 631

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+GYCK++ +  A SL+ EM SKG++P   ++N L  G  +   +E+A  LF EM 
Sbjct: 632 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 691

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G A  T ++ T IDG CK+  I EA +LF  +   +   D   Y ++ID  CK+G++E
Sbjct: 692 QKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 750

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF+ +    L+ + VTY+ ++ G    GQ  +   LF  M    V P+ +T+ ++I
Sbjct: 751 EANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 810

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
               + +   +  +L  ++    ++   +I  +++  L K E
Sbjct: 811 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 852



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 210/403 (52%), Gaps = 7/403 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T ++ I GL    R+ EA  +F++L+  G  PDVFTY++L++G C+      A  L
Sbjct: 522 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 581

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM       G+   PN   Y  ++DGLCK G + +A++L   M +K ++P+ VTY+++
Sbjct: 582 HDEMCLK----GIA--PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 635

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C +++  EA  LF EM  +GVQP+   +N ++   CK G M++A  L   M+Q G 
Sbjct: 636 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 695

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
                ++NTL+DG+C + ++  A +LF  M +        +Y+ +I+ +CK  ++E A  
Sbjct: 696 -ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 754

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM  + +  D V + +L  G  ++ Q    F LF++M   GV  D  TY   I   C
Sbjct: 755 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 814

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   +VEA +L   +           ++ LI  LCK   L  A +L   +    L P++ 
Sbjct: 815 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 874

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             S ++      G+MD+A  +F  ++   +VP+  T   L+ G
Sbjct: 875 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 205/400 (51%), Gaps = 7/400 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     V   + +    PD  T++SLI G C +  + +A  L  ++ + G  P++F Y
Sbjct: 538 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 597

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+GLC++     A  LF+ M     E G+  EP++VTY+T+IDG CK   V +A  L
Sbjct: 598 NALVDGLCKSGDIQRARKLFDGMP----EKGL--EPDSVTYSTMIDGYCKSENVAEAFSL 651

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K ++P+   Y +++ G C   D  +A  LF EM+ +G     ++FN ++D  CK
Sbjct: 652 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCK 710

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + K+ EAS+L   MI   + PD  TY T++D  C  G++  A  LF  M+         +
Sbjct: 711 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 770

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L+ GY K  +     +L+ +M++KG+KPD V +  +     +   +  AFKL DE+ 
Sbjct: 771 YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 830

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+      +   I  LCK   + EA +L   +  L  +  + A ++L+    ++G+++
Sbjct: 831 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMD 890

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            A  +F  +    LVP+  T   ++ G  ND   + AR+L
Sbjct: 891 EATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 930



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 183/394 (46%), Gaps = 18/394 (4%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKEL------------------LLQMKDKNIKPNVVTYTS 139
           + V +  +ID   + G +D+A  +                  L  M +K + PN  TYT 
Sbjct: 155 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTI 214

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +  G C AK  NEAK  F EM   G++P+    + ++D   + G +DE  R+ D+M+  G
Sbjct: 215 ITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG 274

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           +  +  TYN L+ G C  G++  A E+   M ++GCK    ++ +LI GYC+   +  AL
Sbjct: 275 IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 334

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  EM  + + P  V +  +  GL     +  A KL ++M  +G+  +   Y T I G 
Sbjct: 335 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 394

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
              G I EA  L   +       DI  YN++I  L K+G++E A      +    L P+ 
Sbjct: 395 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 454

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT+   I G    G+M +A   F +M ++ ++PN   + +LI G  +     + + +   
Sbjct: 455 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 514

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           +  + V+PD    S  +  L KN     +L  F+
Sbjct: 515 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS 548



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 125/243 (51%), Gaps = 6/243 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           ++F +LI G C   +I EA+ LF ++      PD  TYTT+++  C+      A  LF+E
Sbjct: 699 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 758

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M   N         +TVTYT+++ G  K G   +   L  +M  K +KP+ VTY  VI  
Sbjct: 759 MQERN------LIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYA 812

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C   +  EA +L  E++ +G+       ++++  LCK   + EAS+LLD M + G++P 
Sbjct: 813 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 872

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
               +TL+  F   G+++ A  +F  ++S+G      +   L+NG   + + E A +L  
Sbjct: 873 LAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIK 932

Query: 264 EML 266
           +++
Sbjct: 933 QLV 935



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 37/260 (14%)

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG-- 283
            + S   MG    + S+SIL    C ++    A  + ++M+        ++ + LF    
Sbjct: 91  FYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRN 150

Query: 284 -------LFEI--------HQVERAFKLF------------------DEMQRNGVAADTW 310
                  +F+I          ++ A  +F                    M   G+  +T+
Sbjct: 151 YGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTY 210

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY     GLC+   + EA   F  ++    + D  A ++LIDG  + G ++  L +   +
Sbjct: 211 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 270

Query: 371 -PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
             CG+ + N++TY+++I GLC  G+M+KA ++   M      PN  TF +LI G+ R + 
Sbjct: 271 VSCGIPI-NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 329

Query: 430 PSKVIELLHKMKEINVMPDA 449
             + +ELL +M++ N++P A
Sbjct: 330 MGRALELLDEMEKRNLVPSA 349



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 6/161 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+ S  F +  +++     PD VT+  +I   C E  ++EA  L  ++   G       
Sbjct: 781 LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 840

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  L+  LC+      A  L +EM    GE G+  +P+    +T++    + G +D+A  
Sbjct: 841 HDLLITALCKREDLTEASKLLDEM----GELGL--KPSLAACSTLVRSFHEAGKMDEATR 894

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           +   +K   + P+  T   ++ G     D  +A+ L  +++
Sbjct: 895 VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 257/564 (45%), Gaps = 110/564 (19%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F     ++    +PDA T+ +L+ GLC  SR+ EA AL  ++   G +P++  Y
Sbjct: 292 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVY 351

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLV+G  +   T  A ++ +EM +     GV  +PN + Y  +I GLCK G + +A +L
Sbjct: 352 GTLVDGFMKEGKTAEAFDILKEMISA----GV--QPNKIMYDNLIRGLCKIGQLGRASKL 405

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M    ++P+  TY  +++G     D + A  L  EM + G+ PNV ++ ++++ LC+
Sbjct: 406 LKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQ 465

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTY---------------------------------- 207
           NG+  EA  LL+ MI  G++P+AF Y                                  
Sbjct: 466 NGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFC 525

Query: 208 -NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
            N+L+ G    GR+  A+E +  ++  G     F+YS LI+GYCK   +E A  L  +ML
Sbjct: 526 YNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQML 585

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVER---------------------------------- 292
           + G+KP+   +  L  G F+ +  E+                                  
Sbjct: 586 NSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENME 645

Query: 293 -AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            AF +  E+++NG+  D   Y + I GLCK   + +AV L   +     E  I  YN+LI
Sbjct: 646 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALI 705

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG C+SG +  A  +F S+    LVPN VTY+ +I G C +G +  A DL+ +M +  + 
Sbjct: 706 DGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIA 765

Query: 412 P----------------------------------NVITFDMLIRGFIRINEPSKVIELL 437
           P                                  NV  F+ L+ GF +  +  +  +LL
Sbjct: 766 PDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLL 825

Query: 438 HKMKEINVMPDASIVSIVVDLLAK 461
           H M +  ++P+A  V  VV    K
Sbjct: 826 HVMMDREIVPNAQTVEKVVSEFGK 849



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 217/436 (49%), Gaps = 10/436 (2%)

Query: 32  GLCAESRIMEAAALFTKLRVF----GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           GL  +    +A  L  KL+ F    G  PDV+TY+T +   C+      A  +FEEM   
Sbjct: 213 GLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRR 272

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
           +      C  N VTY  +I GLC+ G V++A     +M D  + P+  TY +++ G C  
Sbjct: 273 D------CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKG 326

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
               EAK L  EM   G++PN+V +  ++D   K GK  EA  +L  MI  GV+P+   Y
Sbjct: 327 SRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMY 386

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           + L+ G C  G++  A +L   M  +G +   F+Y+ L+ G+ +  + +GA  L +EM +
Sbjct: 387 DNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRN 446

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            GI P+V  +  +  GL +  + + A  L +EM   G+  + + Y   I G  K G I  
Sbjct: 447 SGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISL 506

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A E    +       D+  YNSLI GL   GR+E A E +  +    LVP+  TYS +I 
Sbjct: 507 ACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIH 566

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           G C  G ++KA  L   M  + + PN  T+  L+ G+ + N+  KV  +L  M      P
Sbjct: 567 GYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKP 626

Query: 448 DASIVSIVVDLLAKNE 463
           D  I  IV+  L+++E
Sbjct: 627 DNHIYGIVIRNLSRSE 642



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 226/441 (51%), Gaps = 6/441 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+++ I+  C       A  +F ++R   C  +  TY  +++GLCR+     A   
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 300

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            EEM     ++G+   P+  TY  +++GLCK   + +AK LL +M    +KPN+V Y ++
Sbjct: 301 KEEMV----DYGL--SPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTL 354

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GF       EA  +  EM+  GVQPN + ++ ++  LCK G++  AS+LL  MI+ G+
Sbjct: 355 VDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGL 414

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           RPD FTYN L+ G       + A EL   M + G    V+SY I+ING C+N E + A +
Sbjct: 415 RPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGN 474

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM+S+G+KP+  ++  L +G  +   +  A +  ++M +  V  D + Y + I GL 
Sbjct: 475 LLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLS 534

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G + EA E +  ++      D   Y+ LI G CK+G LE A +L R +    L PN  
Sbjct: 535 TVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNAD 594

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ G       +K   +   M  +   P+   + ++IR   R         +L ++
Sbjct: 595 TYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 654

Query: 441 KEINVMPDASIVSIVVDLLAK 461
           ++  ++PD  I S ++  L K
Sbjct: 655 EKNGLVPDLHIYSSLISGLCK 675



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 186/369 (50%), Gaps = 7/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S     L ++ K+   PD   + SLIKGL    R+ EA   + +++  G  PD FTY
Sbjct: 502 GNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTY 561

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++G C+T +   A  L  +M N         +PN  TYT +++G  K    +K   +
Sbjct: 562 SGLIHGYCKTGNLEKADQLLRQMLNSG------LKPNADTYTDLLEGYFKSNDYEKVSSI 615

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M     KP+   Y  VIR    +++   A  +  E+   G+ P++  ++ ++  LCK
Sbjct: 616 LQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCK 675

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              M++A  LLD M + G+ P    YN L+DGFC +G ++ A+ +F S+ + G      +
Sbjct: 676 IADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVT 735

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G CKN +I  A  LY EML +GI PD  ++N L  G  +   +E+A  L +EM 
Sbjct: 736 YTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF 795

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G  A+   + T + G CK G + E  +L H +   +   + +    ++    K+G+L 
Sbjct: 796 NRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLG 854

Query: 362 IALELFRSL 370
            A  +F  L
Sbjct: 855 EAHRVFAEL 863



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 170/413 (41%), Gaps = 58/413 (14%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-----------------------KDKNI 130
           +  P+   +  +   LC      +A  LL QM                       + ++ 
Sbjct: 110 IAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSP 169

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            P+      ++  +        A ++ + M D G+ P     N ++ +L +   M+   +
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M   G+ PD +TY+T ++  C     + AK++F  M    C     +Y+++I+G C
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           ++  +E A     EM+  G+ PD   +  L  GL +  +++ A  L DEM  +G+  +  
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL---------- 360
            Y T +DG  K G   EA ++   +     + +   Y++LI GLCK G+L          
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 361 -------------------------EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                                    + A EL   +    ++PNV +Y IMI GLC +G+ 
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +A +L  +M    + PN   +  LI G  +    S   E L KM + NV PD
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 162/340 (47%), Gaps = 7/340 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+        ++ K    PD  T++ LI G C    + +A  L  ++   G +P+  T
Sbjct: 536 VGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADT 595

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ G  +++      ++ + M  G+G+     +P+   Y  +I  L +   ++ A  
Sbjct: 596 YTDLLEGYFKSNDYEKVSSILQSML-GSGD-----KPDNHIYGIVIRNLSRSENMEVAFM 649

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L +++   + P++  Y+S+I G C   D  +A  L  EM  +G++P +V +N ++D  C
Sbjct: 650 VLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 709

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           ++G +  A  + D ++  G+ P+  TY  L+DG C  G +  A +L+  M   G     F
Sbjct: 710 RSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAF 769

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y++L  G     ++E AL L  EM ++G   +V + NTL  G  +  +++   KL   M
Sbjct: 770 VYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVM 828

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
               +  +  T    +    K G + EA  +F  L+  K 
Sbjct: 829 MDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKA 868



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 129/266 (48%), Gaps = 22/266 (8%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F+VL  + K+   PD   ++SLI GLC  + + +A  L  ++   G EP +  Y  L++
Sbjct: 647 AFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALID 706

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G CR+     A N+F+ +       G+V  PN VTYT +IDG CK G +  A +L  +M 
Sbjct: 707 GFCRSGDISRARNVFDSILAK----GLV--PNCVTYTALIDGNCKNGDITDAFDLYKEML 760

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           D+ I P+   Y  +  G   A D  +A  L  EM ++G   NV  FN ++   CK GK+ 
Sbjct: 761 DRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQ 819

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           E  +LL +M+   + P+A T   ++  F   G++  A  +F  ++      +      L 
Sbjct: 820 ETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSL- 878

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKP 272
                         L+++M++KG+ P
Sbjct: 879 --------------LFTDMINKGLIP 890



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 8/183 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S    V   IL     P+ VT+T+LI G C    I +A  L+ ++   G  PD F Y
Sbjct: 712 GDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVY 771

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L  G    +    AL L EEM N           N   + T++ G CK G + + ++L
Sbjct: 772 NVLATGCSDAADLEQALFLTEEMFNRG-------YANVSLFNTLVHGFCKRGKLQETEKL 824

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELC 180
           L  M D+ I PN  T   V+  F  A    EA R+F E+   +  Q     F+++  ++ 
Sbjct: 825 LHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMI 884

Query: 181 KNG 183
             G
Sbjct: 885 NKG 887


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 144/447 (32%), Positives = 235/447 (52%), Gaps = 9/447 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     ++ ++ KS   PD  T+TS+I G C    +  A  +F ++   GCEP+  TY
Sbjct: 242 GNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATY 301

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NGLC +     AL+   EM       GV+  P   T+T  I  LC  G ++ A ++
Sbjct: 302 STLINGLCNSGRVNEALDFISEMT----RHGVL--PTVHTFTAPIVALCDMGRIEDAWKI 355

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            + MK K  KPNV TYTS+I G   ++    A  LF  M   GV PN VT+N +M+ L +
Sbjct: 356 FIDMKKKGCKPNVYTYTSLISGQRVSR---MAIGLFHRMSRDGVVPNTVTYNALMNVLME 412

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N ++D A  + ++M +HG  P+  +YN L+ G+C  G    A  +  +M       T+ +
Sbjct: 413 NMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVT 472

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+I GYC + + + A+ +   M + G +PD   +  L  G  +I ++E A  +F+EM 
Sbjct: 473 YNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMM 532

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY   I G CK+  +  A  +   ++   C  +++ YN LI GL K     
Sbjct: 533 DRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFS 592

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL + +    + P+VVTYS +I GLCN+G +  A ++F  M ++  +PN+ T+  LI
Sbjct: 593 GAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLI 652

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
           +   +     +  E+  ++K+  ++PD
Sbjct: 653 QALGQEGRVEEAEEMFSELKKQGLIPD 679



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/423 (33%), Positives = 224/423 (52%), Gaps = 9/423 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV+     +  + +    P   TFT+ I  LC   RI +A  +F  ++  GC+P+V+TY
Sbjct: 312 GRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTY 371

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++G  R S   +A+ LF  M+      GVV  PNTVTY  +++ L +   +D A  +
Sbjct: 372 TSLISGQ-RVSR--MAIGLFHRMSRD----GVV--PNTVTYNALMNVLMENMEIDSALIV 422

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M      PN  +Y  +IRG+C   D  +A  +   M+     P +VT+N+I+   C 
Sbjct: 423 FNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCD 482

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G  D A R+L+LM  +G +PD ++Y  L+ GFC   ++  A  +F  M   G      +
Sbjct: 483 SGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVT 542

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GYCK+++++ A  +   M   G +P+V  +N L  GL + +    A +L   M 
Sbjct: 543 YTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVML 602

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              ++ D  TY T I+GLC NG I  A+E+F+ +    C  ++  Y+SLI  L + GR+E
Sbjct: 603 EEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVE 662

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A E+F  L    L+P+ VTY  MI      G++D+A D   +M      P + T+D+LI
Sbjct: 663 EAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLI 722

Query: 422 RGF 424
           +G 
Sbjct: 723 KGL 725



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 231/484 (47%), Gaps = 40/484 (8%)

Query: 13  RILKSCFTPDAV--TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           R+L+S   P AV      +IK    ++ + +A          G +  +FTYTTL+  L +
Sbjct: 146 RLLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNK 205

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
            + T   ++ + ++           +PN + Y ++I+ LCK+G V  A+ ++ ++    +
Sbjct: 206 LNMTSTVMDRYHQILREG------LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGM 259

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           KP+  TYTS+I G+C  +D + A  +F  M ++G +PN  T++ +++ LC +G+++EA  
Sbjct: 260 KPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALD 319

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY- 249
            +  M +HGV P   T+   +   C  GR+  A ++F+ M+  GCK  V++Y+ LI+G  
Sbjct: 320 FISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQR 379

Query: 250 -------------------------------CKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
                                           +N EI+ AL +++ M   G  P+   +N
Sbjct: 380 VSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYN 439

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L  G   I   E+A  +   M +        TY   I G C +G    A+ +   ++  
Sbjct: 440 ELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKAN 499

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            C+ D  +Y  LI G CK  ++E+A  +F  +    L PN VTY+ +I G C D ++D A
Sbjct: 500 GCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCA 559

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             +   M+ +   PNV T+++LI G  + N  S   EL   M E  + PD    S V++ 
Sbjct: 560 ARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVING 619

Query: 459 LAKN 462
           L  N
Sbjct: 620 LCNN 623



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 220/459 (47%), Gaps = 19/459 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G       +L  +LK   TP  VT+  +IKG C       A  +   ++  GC+PD ++
Sbjct: 448 IGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWS 507

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G C+ S   +A  +F EM +       +C PN VTYT +I G CK+  +D A  
Sbjct: 508 YTELISGFCKISKMELASGMFNEMMDRG-----LC-PNEVTYTALISGYCKDEKLDCAAR 561

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L +MK    +PNV TY  +I G     +++ A+ L   M+++ + P+VVT++ +++ LC
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            NG +  A  + + M++HG  P+  TY++L+      GRV  A+E+F  ++  G      
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV 681

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  +I     + +++ A     EM++ G +P +  ++ L  GL    Q E  +     +
Sbjct: 682 TYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL----QNEMVYHKLVAL 737

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                AA T T+    D    N  ++    L   L  L  E   + Y++L+  L +SGR 
Sbjct: 738 PN---AASTSTF----DDQIINKDVISV--LSSKLAELDFELSRQLYDALLSRLSRSGRW 788

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  L+RS+      PN  TY   +  L    ++D A D+F  M +     ++  +  L
Sbjct: 789 FEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKEL 848

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           I    +++   +   +  KM    +  D  + +I+++ L
Sbjct: 849 ICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGL 887


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/447 (32%), Positives = 233/447 (52%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    ++ ++ +S  +PD  T+TS+I G C +  +  A  +F ++   GCEP+  TY
Sbjct: 399 GNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 458

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NGLC +     A +L  EM       G++  P   T T  I  LC  G  + A  L
Sbjct: 459 STLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAHTCTGPIIALCDMGCYEDAWRL 512

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            + MK+K  +PNV TYT++I G C +     A  LF  M   GV PN VT+N +++ L +
Sbjct: 513 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 572

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N ++  A  +L+LM ++G+  +  TYN ++ G+C+ G    A  +  +M   G    + +
Sbjct: 573 NRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 632

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I GYC +     AL +   M   G KPD   +  L  G  +I ++E AF LF+EM 
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 692

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  +  TY   IDG CK+  +  A  L   ++   C  +++ YN LI GL K     
Sbjct: 693 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 752

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL + +    + PNVVTY+ MI GLC +G    A ++F  M E   +PN++T+  LI
Sbjct: 753 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 812

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
           R   +  +  +   L  +++   ++PD
Sbjct: 813 RALGQEGKVEEAENLFAELERHGLIPD 839



 Score =  227 bits (579), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 142/423 (33%), Positives = 221/423 (52%), Gaps = 6/423 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV+  F ++  ++     P A T T  I  LC      +A  LF  ++  GCEP+V+TY
Sbjct: 469 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 528

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GLC +    VA+ LF  M+  +G F     PNTVTY  +I+ L +   +  A  +
Sbjct: 529 TALISGLCVSGLLKVAIGLFHRMSR-DGVF-----PNTVTYNALINILVENRRIKYAFVV 582

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M    +  N+VTY  +I+G+C   D  +A  +   M+ +G   N+VT+N I+   C 
Sbjct: 583 LNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 642

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    A R+LDLM   G +PD ++Y  L+ GFC   ++  A  LF  M   G      +
Sbjct: 643 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 702

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GYCK+++++ A SL   M   G +P+V  +N L  GL + +    A +L   M 
Sbjct: 703 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 762

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY   IDGLCKNG    A+E+F+ +    C  ++  Y+SLI  L + G++E
Sbjct: 763 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 822

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF  L    L+P+ +TY  MI      G+++ A +    M +    P + T+ +LI
Sbjct: 823 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 882

Query: 422 RGF 424
           +G 
Sbjct: 883 KGL 885



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 229/469 (48%), Gaps = 26/469 (5%)

Query: 14  ILKSCFTPDAVTFT----------SLIKGLCAESRI--------MEAAAL--FTKLRVFG 53
           ++KSC + +A+  T           L  GL A S +        M AA +  + ++   G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
            +P++  Y  ++N LC+  +   A  + +++      F     P+T TYT++I G C++ 
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKV------FESEMSPDTFTYTSMILGHCRKH 434

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            +D A ++  QM  +  +PN VTY+++I G C +   NEA  L  EM+  G+ P   T  
Sbjct: 435 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 494

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
             +  LC  G  ++A RL   M   G  P+ +TY  L+ G C++G +  A  LF  M   
Sbjct: 495 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 554

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G      +Y+ LIN   +N+ I+ A  + + M   G+  ++V +N +  G   +   ++A
Sbjct: 555 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKA 614

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             + + M + G +A+  TY T I G C +G    A+ +   +R   C+ D  +Y  LI G
Sbjct: 615 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 674

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            CK  ++E A  LF  +    L PN VTY+ +I G C D ++D A  L   M+ +   PN
Sbjct: 675 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 734

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           V T+++LI G  + N  S   EL   M E  + P+    + ++D L KN
Sbjct: 735 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 783



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 223/493 (45%), Gaps = 46/493 (9%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +G      +V+  +L+   + + VT+ ++IKG C       A  +   +R  GC+PD ++
Sbjct: 608  LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 667

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            YT L+ G C+ S    A  LF EM +       +C PN VTYT +IDG CK+  +D A  
Sbjct: 668  YTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDGYCKDEKLDTATS 721

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            LL  MK    +PNV TY  +I G     +++ A+ L   M+++G+ PNVVT+  ++D LC
Sbjct: 722  LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 781

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            KNG    A  + + MI+ G  P+  TY++L+      G+V  A+ LF  +E  G      
Sbjct: 782  KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 841

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +Y  +I  Y  + ++E A +    M+  G +P +  +  L  GL      +  + L D  
Sbjct: 842  TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------KNEYLLAD-- 893

Query: 301  QRNGVAAD-----TWTYRT---------------------------FIDGLCKNGYIVEA 328
            QR     D     ++ Y+T                            +  L   G   EA
Sbjct: 894  QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 953

Query: 329  VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
             EL  ++       D  AYNSL+  L +   +++A+ +F+ +       ++  Y  +I  
Sbjct: 954  NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 1013

Query: 389  LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            LC   +  +AR  F +M      P+ +   +LI G +R       +E LH M+    MP 
Sbjct: 1014 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 1073

Query: 449  ASIVSIVVDLLAK 461
              I +I+    +K
Sbjct: 1074 FHIYTILAREASK 1086



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/272 (19%), Positives = 106/272 (38%), Gaps = 22/272 (8%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G+V     +   + +    PD +T+  +I+      ++  A     ++   GC+P ++TY
Sbjct: 819  GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 878

Query: 62   TTLVNGLCRTSHTIVALNLFEEMAN--GNGEFGV-VCEPNTVTYTT-------------- 104
              L+ GL   +  ++A      + +   N  FG    + + V+  +              
Sbjct: 879  GVLIKGL--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQV 936

Query: 105  ---IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
               ++  L   G   +A ELL  M  + + P+   Y S++      ++ + A  +F  M 
Sbjct: 937  QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 996

Query: 162  DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
             QG + ++  +  ++  LC+  +  EA    + M+     PD      L+DG    G  +
Sbjct: 997  TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 1056

Query: 222  HAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
               E    ME+     +   Y+IL     K +
Sbjct: 1057 LCMEFLHIMETRRYMPSFHIYTILAREASKKR 1088


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 130/352 (36%), Positives = 205/352 (58%), Gaps = 6/352 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + P+ +T  +LIKGLC + +I +A     KL   G   D  +Y TL++GLC+   T  AL
Sbjct: 3   YHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAAL 62

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L + +       G + + N V Y T+I G+CK+  V+ A +L  +M  K I PNVVTY+
Sbjct: 63  DLLQRVD------GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 116

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I GF       +A  LF +++ + ++P+  TFN+++D  CK+ KM E   +  +M++ 
Sbjct: 117 ALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ 176

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  TYN+L+DG+ L   VN AK +F +M   G    + SY+ILING+CK K+++ A
Sbjct: 177 GIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKA 236

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           ++L++EM  K I P+VV +N+L  GL +  ++  A +L D+M   GV  +  TY + ID 
Sbjct: 237 MNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDA 296

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           L K   + +A+ L    +    +  +  Y  LIDGLCK GRL+ A  +F  L
Sbjct: 297 LFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 192/353 (54%), Gaps = 6/353 (1%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  P+  T  TL+ GLC       A    +++        +    + V+Y T+I GLCK 
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLV------ALGFHLDQVSYGTLIHGLCKV 55

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G    A +LL ++  K ++ N V Y +VI G C  K  N+A  L+ EM+ +G+ PNVVT+
Sbjct: 56  GETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 115

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           + ++      GK+ +A  L + +I   ++PD +T+N L+DGFC   ++   K +F  M  
Sbjct: 116 SALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK 175

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G    V +Y+ L++GY   KE+  A S+++ M   G+ PD+  +N L  G  +I +V++
Sbjct: 176 QGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDK 235

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  LF+EM    +  +  TY + IDGL K+G I  A++L   +       +I  YNS+ID
Sbjct: 236 AMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIID 295

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            L K+ +++ A+ L        + P++ TY+I+I GLC  G++  AR++F D+
Sbjct: 296 ALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 184/331 (55%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
            PNT+T  T+I GLC +G + +A     ++       + V+Y ++I G C   +   A  
Sbjct: 4   HPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALD 63

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           L   +  + VQ N V +N ++  +CK+  +++A  L   M+  G+ P+  TY+ L+ GF 
Sbjct: 64  LLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 123

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           + G++  A +LF  +     K   ++++IL++G+CK+++++   ++++ M+ +GI PDVV
Sbjct: 124 VVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVV 183

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N+L  G   + +V  A  +F+ M + GV  D  +Y   I+G CK   + +A+ LF+ +
Sbjct: 184 TYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEM 243

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                  ++  YNSLIDGL KSGR+  AL+L   +    + PN++TY+ +I  L    Q+
Sbjct: 244 HCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQV 303

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           DKA  L    ++  + P++ T+ +LI G  +
Sbjct: 304 DKAIALITKFKDQGIQPSMYTYTILIDGLCK 334



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 164/333 (49%), Gaps = 35/333 (10%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G  PN +T N ++  LC  G++ +A    D ++  G   D  +Y TL+ G C  G    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            +L   ++    +     Y+ +I G CK+K +  A  LYSEM+SKGI P+VV ++ L  G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN--------------------- 322
            F + +++ A  LF+++    +  D +T+   +DG CK+                     
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 323 ---------GY-----IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
                    GY     +  A  +F+T+       DIR+YN LI+G CK  +++ A+ LF 
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            + C  ++PNVVTY+ +I GL   G++  A  L   M +  V PN++T++ +I    + +
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  K I L+ K K+  + P     +I++D L K
Sbjct: 302 QVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 334



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 148/265 (55%), Gaps = 10/265 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            V+  F +   ++    +P+ VT+++LI G     ++ +A  LF K+ +   +PD +T+ 
Sbjct: 92  HVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFN 151

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG--LCKEGFVDKAKE 120
            LV+G C+         +F  M     + G++  P+ VTY +++DG  L KE  V+ AK 
Sbjct: 152 ILVDGFCKDRKMKEGKTVFAMMM----KQGII--PDVVTYNSLVDGYRLVKE--VNTAKS 203

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    + P++ +Y  +I GFC  K  ++A  LF EM  + + PNVVT+N ++D L 
Sbjct: 204 IFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLS 263

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G++  A +L+D M   GV P+  TYN+++D    T +V+ A  L    +  G + +++
Sbjct: 264 KSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMY 323

Query: 241 SYSILINGYCKNKEIEGALSLYSEM 265
           +Y+ILI+G CK   ++ A +++ ++
Sbjct: 324 TYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 120/227 (52%), Gaps = 6/227 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  +I+     PD  TF  L+ G C + ++ E   +F  +   G  PDV T
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +LV+G         A ++F  MA G         P+  +Y  +I+G CK   VDKA  
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGG------VNPDIRSYNILINGFCKIKKVDKAMN 238

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  KNI PNVVTY S+I G   +   + A +L  +M D+GV PN++T+N I+D L 
Sbjct: 239 LFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALF 298

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           K  ++D+A  L+      G++P  +TY  L+DG C  GR+  A+ +F
Sbjct: 299 KTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIF 345



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 115/229 (50%)

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           MG      + + LI G C   +I  A   + ++++ G   D V + TL  GL ++ +   
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  L   +    V  +   Y T I G+CK+ ++ +A +L+  +       ++  Y++LI 
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G    G+L+ A++LF  +    + P+  T++I++ G C D +M + + +F  M +  ++P
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +V+T++ L+ G+  + E +    + + M +  V PD    +I+++   K
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCK 229



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 49/83 (59%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S+   ++ ++      P+ +T+ S+I  L    ++ +A AL TK +  G +P ++TY
Sbjct: 266 GRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTY 325

Query: 62  TTLVNGLCRTSHTIVALNLFEEM 84
           T L++GLC+      A N+FE++
Sbjct: 326 TILIDGLCKGGRLKDARNIFEDL 348


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 140/455 (30%), Positives = 230/455 (50%), Gaps = 7/455 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV      + + +   F PD VTF++ + GLC    +  A  +   +   GCEPDV+T
Sbjct: 279 LGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYT 338

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+T++N LC       A  +  +M +        C P+T T+ T+I  LC E  +++A +
Sbjct: 339 YSTVINCLCNNGELEEAKGIVNQMVDSG------CLPDTTTFNTLIVALCTENQLEEALD 392

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++  K + PNV T+  +I   C   D + A RLF EM   G  P+ VT+N+++D LC
Sbjct: 393 LARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLC 452

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +GK+ +A  LL  M   G      TYNT++DG C   R+  A+E+F  M+  G      
Sbjct: 453 SSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAI 512

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LI+G C  + I+ A  L  +M+S+G++P+ V +N++     +   + +A  +   M
Sbjct: 513 TFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D  TY T I+GLCK      A++L   +R+   +   +AYN +I  L +    
Sbjct: 573 TANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNG 632

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLC-NDGQMDKARDLFLDMEENAVVPNVITFDM 419
             AL LFR +      P+  TY I+  GLC   G + +A D  ++M +N  +P   +F M
Sbjct: 633 RDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRM 692

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           L  G + +     +I  +  + E     ++ I +I
Sbjct: 693 LAEGLLNLGMDDYLIRAIELIVEKANFRESDISAI 727



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/459 (31%), Positives = 230/459 (50%), Gaps = 7/459 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +  R+ +   +P +VT   LI G C   R+ +A     +    G EPD  T+
Sbjct: 245 GSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTF 304

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +T VNGLC+  H   AL +   M          CEP+  TY+T+I+ LC  G +++AK +
Sbjct: 305 STFVNGLCQNGHVDHALKVLGLMLQEG------CEPDVYTYSTVINCLCNNGELEEAKGI 358

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + QM D    P+  T+ ++I   C      EA  L  E+  +G+ PNV TFN++++ LCK
Sbjct: 359 VNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCK 418

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A RL + M   G  PD  TYN L+D  C +G++  A +L   ME  GC  +  +
Sbjct: 419 VGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVT 478

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G CK + IE A  ++ +M   GI  + +  NTL  GL    +++ A +L D+M 
Sbjct: 479 YNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMI 538

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY + +   CK G I +A ++  T+     E D+  Y +LI+GLCK+ R +
Sbjct: 539 SEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQ 598

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL+L R +    + P    Y+ +I  L        A  LF +M E    P+  T+ ++ 
Sbjct: 599 AALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVF 658

Query: 422 RGFIRINEPSK-VIELLHKMKEINVMPDASIVSIVVDLL 459
           RG  R   P K   + L +M +   +P+ S   ++ + L
Sbjct: 659 RGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL 697



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 228/456 (50%), Gaps = 9/456 (1%)

Query: 2   GRVSHGFVVLGRILKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            R +   V++   + SC   PD  TFT+L++G   E  I  A  L  ++   GC P   T
Sbjct: 209 ARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVT 268

Query: 61  YTTLVNGLCRTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
              L+NG C+      AL   + E+A+G        EP+ VT++T ++GLC+ G VD A 
Sbjct: 269 VNVLINGYCKLGRVGDALGYIQQEIADG-------FEPDRVTFSTFVNGLCQNGHVDHAL 321

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           ++L  M  +  +P+V TY++VI   C   +  EAK +  +M+D G  P+  TFN ++  L
Sbjct: 322 KVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVAL 381

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C   +++EA  L   +   G+ P+ +T+N L++  C  G  + A  LF  M+S GC    
Sbjct: 382 CTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDE 441

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ILI+  C + ++  AL L  EM   G     V +NT+  GL +  ++E A ++FD+
Sbjct: 442 VTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQ 501

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G+  +  T+ T IDGLC    I +A EL   +     + +   YNS++   CK G 
Sbjct: 502 MDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGN 561

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A ++ +++       +VVTY+ +I GLC   +   A  L   M    + P    ++ 
Sbjct: 562 ISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNP 621

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           +I+   R N     + L  +M E+   PDA    IV
Sbjct: 622 VIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIV 657



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 229/432 (53%), Gaps = 10/432 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           +  L+  L   S+I    + +T++   G EPDV T+ T+++ LCR      A+ + EEM+
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
           + +        P+  T+TT+++G  +EG ++ A  L  +M +    P  VT   +I G+C
Sbjct: 224 SCD------VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYC 277

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                 +A     + +  G +P+ VTF+  ++ LC+NG +D A ++L LM+Q G  PD +
Sbjct: 278 KLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVY 337

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TY+T+++  C  G +  AK +   M   GC     +++ LI   C   ++E AL L  E+
Sbjct: 338 TYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL 397

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             KG+ P+V   N L   L ++     A +LF+EM+ +G   D  TY   ID LC +G +
Sbjct: 398 TVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKL 457

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +A++L   + +  C      YN++IDGLCK  R+E A E+F  +    +  N +T++ +
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK---- 441
           I GLCN  ++D A +L   M    + PN +T++ ++  + +    SK  ++L  M     
Sbjct: 518 IDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577

Query: 442 EINVMPDASIVS 453
           E++V+  A++++
Sbjct: 578 EVDVVTYATLIN 589



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 231/468 (49%), Gaps = 14/468 (2%)

Query: 13  RILKSCFT--------PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           ++L+S +T        PD VTF ++I  LC   +   A  +  ++      PD  T+TTL
Sbjct: 178 KLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTL 237

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           + G         AL L   M+    E G  C P +VT   +I+G CK G V  A   + Q
Sbjct: 238 MEGFVEEGSIEAALRLKARMS----EMG--CSPTSVTVNVLINGYCKLGRVGDALGYIQQ 291

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
                 +P+ VT+++ + G C     + A ++   M+ +G +P+V T++ +++ LC NG+
Sbjct: 292 EIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGE 351

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           ++EA  +++ M+  G  PD  T+NTL+   C   ++  A +L   +   G    V++++I
Sbjct: 352 LEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNI 411

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN  CK  +   A+ L+ EM S G  PD V +N L   L    ++ +A  L  EM+ +G
Sbjct: 412 LINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
               T TY T IDGLCK   I EA E+F  + +     +   +N+LIDGLC + R++ A 
Sbjct: 472 CPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAA 531

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           EL   +    L PN VTY+ ++   C  G + KA D+   M  N    +V+T+  LI G 
Sbjct: 532 ELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGL 591

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
            +       ++LL  M+   + P     + V+  L +     ++L  F
Sbjct: 592 CKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLF 639



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 190/405 (46%), Gaps = 37/405 (9%)

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           + F+ ++N    FGV  + NT  Y  ++  L +   +   +    +M  + I+P+VVT+ 
Sbjct: 143 DAFDLVSNQLDMFGV--QANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFN 200

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +VI   C A+    A  +  EM    V P+  TF  +M+   + G ++ A RL   M + 
Sbjct: 201 TVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEM 260

Query: 199 GVRPDAFTYNTLLDGFCLTGR-----------------------------------VNHA 223
           G  P + T N L++G+C  GR                                   V+HA
Sbjct: 261 GCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHA 320

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            ++   M   GC+  V++YS +IN  C N E+E A  + ++M+  G  PD    NTL V 
Sbjct: 321 LKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVA 380

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L   +Q+E A  L  E+   G++ + +T+   I+ LCK G    AV LF  ++   C  D
Sbjct: 381 LCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPD 440

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              YN LID LC SG+L  AL+L + +       + VTY+ +I GLC   ++++A ++F 
Sbjct: 441 EVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFD 500

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            M+   +  N ITF+ LI G           EL+ +M    + P+
Sbjct: 501 QMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPN 545



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 173/364 (47%), Gaps = 1/364 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+   Y  II  L   G  D  K L+ +M+ +  +  +    S I  +   + +++A  L
Sbjct: 88  PSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL 147

Query: 157 FIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
               +D  GVQ N   +N ++  L +  K+         M   G+ PD  T+NT++D  C
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
              +   A  +   M S        +++ L+ G+ +   IE AL L + M   G  P  V
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV 267

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             N L  G  ++ +V  A     +   +G   D  T+ TF++GLC+NG++  A+++   +
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLM 327

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               CE D+  Y+++I+ LC +G LE A  +   +     +P+  T++ +I  LC + Q+
Sbjct: 328 LQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQL 387

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           ++A DL  ++    + PNV TF++LI    ++ +P   + L  +MK     PD    +I+
Sbjct: 388 EEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNIL 447

Query: 456 VDLL 459
           +D L
Sbjct: 448 IDNL 451


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 245/465 (52%), Gaps = 7/465 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V  R++     P   T+++L+  L  +        L  ++   G  P+V+T+
Sbjct: 206 GFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTF 265

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T  +  L R      A  +F  M +        C P+ VTYT +ID LC  G ++ AKEL
Sbjct: 266 TICIRVLGRAGKIDEAYEIFRRMDDEG------CGPDLVTYTVLIDALCNAGQLENAKEL 319

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            ++MK    KP+ V Y +++  F    D +  K  + +M   G  P+VVTF +++D LCK
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
               DEA    D+M + G+ P+  TYNTL+ G    GR+  A +L  +MES+G + T ++
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I I+ + K+ E   A+  + +M +KGI P++V  N     L E+ ++  A  +F+ ++
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG+A D+ TY   +    K G + EAV L   +    CE D+   NSLID L K+GR++
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++F  +    L P VVTY+ ++ GL  +G++ KA +LF  M E    PN I+F+ L+
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLL 619

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEIS 465
             F + +E    +++  KM  ++  PD  +  +++  L+ +N+++
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVN 664



 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 233/442 (52%), Gaps = 9/442 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  TFT  I+ L    +I EA  +F ++   GC PD+ TYT L++ LC       A  L
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           F +M ANG+       +P+ V Y T++D     G +D  KE   QM+     P+VVT+T 
Sbjct: 320 FVKMKANGH-------KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++   C A+D++EA   F  M  QG+ PN+ T+N ++  L + G++++A +LL  M   G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V+P A+TYN  +D F  +G    A E F  M++ G    + + +  +    +   +  A 
Sbjct: 433 VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           ++++ +   G+ PD V +N +     ++ QV+ A  L  EM RNG   D     + ID L
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K G + EA ++F  ++ +K    +  YN+L+ GL K GR++ A+ELF S+      PN 
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNT 612

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           ++++ ++   C + +++ A  +F  M      P+V+T++ +I G I+ N+ +      H+
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           +K+ ++ PD   +  ++  L K
Sbjct: 673 LKK-SMHPDHVTICTLLPGLVK 693



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 228/435 (52%), Gaps = 7/435 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   + +  R+      PD VT+T LI  LC   ++  A  LF K++  G +PD   Y
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++      +    L+ F+E  +     G +  P+ VT+T ++D LCK    D+A   
Sbjct: 336 ITLLDKF----NDFGDLDTFKEFWSQMEADGYM--PDVVTFTILVDVLCKARDFDEAFAT 389

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M+ + I PN+ TY ++I G   A    +A +L   M   GVQP   T+N+ +D   K
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGK 449

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+  +A    + M   G+ P+    N  L      GR+  AK +F  +   G      +
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++++  Y K  +++ A++L SEM+  G +PDV++ N+L   L++  +V+ A+++FD M+
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              ++    TY T + GL K G + +A+ELF ++   KC  +  ++N+L+D  CK+  +E
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVE 629

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL++F  +      P+V+TY+ +I GL  + +++ A   F  +++ ++ P+ +T   L+
Sbjct: 630 LALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLL 688

Query: 422 RGFIRINEPSKVIEL 436
            G ++  +    I +
Sbjct: 689 PGLVKCGQIGDAISI 703



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 230/496 (46%), Gaps = 44/496 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+     +   + ++   PD+VT+  ++K      ++ EA  L +++   GCEPDV  
Sbjct: 485 MGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIV 544

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             +L++ L +      A  +F+ M +      +   P  VTY T++ GL KEG V KA E
Sbjct: 545 VNSLIDSLYKAGRVDEAWQMFDRMKD------MKLSPTVVTYNTLLSGLGKEGRVQKAIE 598

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M +K   PN +++ +++  FC   +   A ++F +M     +P+V+T+N ++  L 
Sbjct: 599 LFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS----------- 229
           K  K++ A       ++  + PD  T  TLL G    G++  A  +              
Sbjct: 659 KENKVNHAFWFFH-QLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717

Query: 230 -----------MESMGCKHTVFSYSILING--------------YCKNKEIEGALSLYSE 264
                      +E+   K  +F+  +++NG               CK+K    A  ++ +
Sbjct: 718 SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDK 777

Query: 265 MLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
              K GI P +  +N L   L E+H  E+A+ LF +M+  G A D +T+   +    K+G
Sbjct: 778 FTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSG 837

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            I E  EL+  +   +C+ D   YN +I  L KS  L+ AL+ F  L      P   TY 
Sbjct: 838 KITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYG 897

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I GL   G++++A  LF +M +    PN   F++LI G+ +I +     +L  +M   
Sbjct: 898 PLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE 957

Query: 444 NVMPDASIVSIVVDLL 459
            + PD    +I+VD L
Sbjct: 958 GIRPDLKSYTILVDCL 973



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 190/364 (52%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  +Y  +I  L + GF  +A E+  +M  + +KP++ TY++++      +D      L 
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM D G++PNV TF + +  L + GK+DEA  +   M   G  PD  TY  L+D  C  
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G++ +AKELFV M++ G K     Y  L++ +    +++     +S+M + G  PDVV  
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             L   L +    + AF  FD M++ G+  +  TY T I GL + G I +A++L  T+  
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
           +  +     YN  ID   KSG    A+E F  +    +VPN+V  +  +  L   G++ +
Sbjct: 431 VGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A+ +F  + EN + P+ +T++M+++ + ++ +  + + LL +M      PD  +V+ ++D
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 458 LLAK 461
            L K
Sbjct: 551 SLYK 554



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 230/484 (47%), Gaps = 44/484 (9%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV   + +  R+     +P  VT+ +L+ GL  E R+ +A  LF  +    C P+  ++
Sbjct: 556  GRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISF 615

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             TL++  C+     +AL +F +M   +      C+P+ +TY T+I GL KE  V+ A   
Sbjct: 616  NTLLDCFCKNDEVELALKMFSKMTVMD------CKPDVLTYNTVIYGLIKENKVNHAFWF 669

Query: 122  LLQMKDKNIKPNVVTY----------------TSVIRGFCYAKDWNEAKRLFIEMMDQG- 164
              Q+K K++ P+ VT                  S+ R F Y   +   +  + ++M    
Sbjct: 670  FHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL 728

Query: 165  VQPNVVTFNVIMDELCKNGKMDEASRLLDL---MIQH-----------------GVRPDA 204
            V+  +    +  +EL  NG   E S L+ L   + +H                 G+ P  
Sbjct: 729  VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788

Query: 205  FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             +YN L+           A +LF  M+++GC    F++++L+  + K+ +I     LY E
Sbjct: 789  ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKE 848

Query: 265  MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
            M+S+  KPD + +N +   L + + +++A   F ++  +       TY   IDGL K G 
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 325  IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
            + EA+ LF  +    C+ +   +N LI+G  K G  E A +LF+ +    + P++ +Y+I
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 385  MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
            ++  LC  G++D+A   F +++   + P+ I ++ +I G  +     + + L ++M+   
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 445  VMPD 448
            ++PD
Sbjct: 1029 IVPD 1032



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 166/331 (50%), Gaps = 6/331 (1%)

Query: 20   TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            +P   ++  LI  L       +A  LF  ++  GC PD FT+  L+    ++        
Sbjct: 785  SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844

Query: 80   LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            L++EM +        C+P+ +TY  +I  L K   +DKA +    +   + +P   TY  
Sbjct: 845  LYKEMISRR------CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898

Query: 140  VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            +I G        EA RLF EM D G +PN   FN++++   K G  + A +L   M+  G
Sbjct: 899  LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958

Query: 200  VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +RPD  +Y  L+D  CL GRV+ A   F  ++S G      +Y+ +ING  K++ +E AL
Sbjct: 959  IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018

Query: 260  SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +LY+EM ++GI PD+  +N+L + L     VE+A ++++E+Q  G+  D +TY   I G 
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078

Query: 320  CKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
              +     A  ++  + +  C  +I  Y  L
Sbjct: 1079 SLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 223/504 (44%), Gaps = 65/504 (12%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV     +   +++   +P+ ++F +L+   C    +  A  +F+K+ V  C+PDV TY
Sbjct: 591  GRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTY 650

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGN-----------------GEFG------------ 92
             T++ GL + +    A   F ++                     G+ G            
Sbjct: 651  NTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQ 710

Query: 93   VVCEPNTVTYTTIIDGLCKEGFVDKA----KELLL------------------------- 123
            V    N   +  ++ G   E  +DKA    +EL+L                         
Sbjct: 711  VRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELY 770

Query: 124  --QMKDK-----NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
              Q+ DK      I P + +Y  +I          +A  LF +M + G  P+  TFN+++
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 177  DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
                K+GK+ E   L   MI    +PDA TYN ++     +  ++ A + F  + S   +
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 237  HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             T  +Y  LI+G  K   +E A+ L+ EM   G KP+  I N L  G  +I   E A +L
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 297  FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            F  M   G+  D  +Y   +D LC  G + EA+  F+ L+    + D  AYN +I+GL K
Sbjct: 951  FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010

Query: 357  SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            S R+E AL L+  +    +VP++ TY+ ++  L   G +++A+ ++ +++   + P+V T
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070

Query: 417  FDMLIRGFIRINEPSKVIELLHKM 440
            ++ LIRG+     P     +   M
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNM 1094



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 184/356 (51%), Gaps = 7/356 (1%)

Query: 29   LIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
            L++ LC   R + A  +F K  +  G  P + +Y  L+  L    +T  A +LF++M N 
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN- 816

Query: 88   NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                 V C P+  T+  ++    K G + +  EL  +M  +  KP+ +TY  VI     +
Sbjct: 817  -----VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKS 871

Query: 148  KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
             + ++A   F +++    +P   T+  ++D L K G+++EA RL + M  +G +P+   +
Sbjct: 872  NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931

Query: 208  NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
            N L++G+   G    A +LF  M + G +  + SY+IL++  C    ++ AL  ++E+ S
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 268  KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
             G+ PD + +N +  GL +  ++E A  L++EM+  G+  D +TY + +  L   G + +
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 328  AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            A  ++  L++   E D+  YN+LI G   S   E A  +++++      PN+ TY+
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 203/455 (44%), Gaps = 44/455 (9%)

Query: 3    RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRI----------------------- 39
            +V+H F    ++ KS   PD VT  +L+ GL    +I                       
Sbjct: 662  KVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFW 720

Query: 40   ------------MEAAALFTKLRVFG--CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
                        M+ A +F +  V    C  D F    LV  LC+    + A  +F++  
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFL-IPLVRVLCKHKRELYAYQIFDKFT 779

Query: 86   NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
               G       P   +Y  +I  L +  + +KA +L   MK+    P+  T+  ++    
Sbjct: 780  KKLG-----ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834

Query: 146  YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
             +    E   L+ EM+ +  +P+ +T+N+++  L K+  +D+A      ++    RP   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 206  TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            TY  L+DG    GR+  A  LF  M   GCK     ++ILINGY K  + E A  L+  M
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 266  LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            +++GI+PD+  +  L   L    +V+ A   F+E++  G+  D   Y   I+GL K+  +
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 326  VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             EA+ L++ +R      D+  YNSL+  L  +G +E A  ++  L    L P+V TY+ +
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074

Query: 386  IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            I G       + A  ++ +M  +   PN+ T+  L
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 122/234 (52%), Gaps = 6/234 (2%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            ++ S F P   T+  LI GL    R+ EA  LF ++  +GC+P+   +  L+NG  +   
Sbjct: 884  LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGD 943

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
            T  A  LF+ M N          P+  +YT ++D LC  G VD+A     ++K   + P+
Sbjct: 944  TETACQLFKRMVNEG------IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997

Query: 134  VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             + Y  +I G   ++   EA  L+ EM ++G+ P++ T+N +M  L   G +++A R+ +
Sbjct: 998  FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057

Query: 194  LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
             +   G+ PD FTYN L+ G+ L+    HA  ++ +M   GC   + +Y+ L N
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 151/313 (48%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M  + ++ ++ T+  I   L   G + + + +L+ M + G   +A++YN L+     +G 
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
              A E++  M S G K ++ +YS L+    K ++ E  + L  EM   G++P+V     
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
               L    +++ A+++F  M   G   D  TY   ID LC  G +  A ELF  ++   
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + D   Y +L+D     G L+   E +  +     +P+VVT++I++  LC     D+A 
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             F  M +  ++PN+ T++ LI G +R       ++LL  M+ + V P A   +I +D  
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYF 447

Query: 460 AKNEISLNSLPSF 472
            K+  +  ++ +F
Sbjct: 448 GKSGETGKAVETF 460



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 143/311 (45%), Gaps = 41/311 (13%)

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T N +++ L  + K+++ + + + M +  +R D  TY T+     + G +     +   M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G     +SY+ LI+   ++     AL +Y  M+S+G+KP +  ++ L V L +    
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E    L  EM+  G+  + +T+      +C              +R+L            
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFT-----IC--------------IRVLG----------- 273

Query: 351 IDGLCKSGRLEIALELFRSLP---CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
                ++G+++ A E+FR +    CG   P++VTY+++I  LCN GQ++ A++LF+ M+ 
Sbjct: 274 -----RAGKIDEAYEIFRRMDDEGCG---PDLVTYTVLIDALCNAGQLENAKELFVKMKA 325

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
           N   P+ + +  L+  F    +     E   +M+    MPD    +I+VD+L K      
Sbjct: 326 NGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDE 385

Query: 468 SLPSFTVHEQQ 478
           +  +F V  +Q
Sbjct: 386 AFATFDVMRKQ 396



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 109/221 (49%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           HT  + + ++     + ++E   +++  M  K I+ D+  + T+F  L     + +   +
Sbjct: 120 HTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTV 179

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            ++M++ G   + ++Y   I  L ++G+  EA+E++  +     +  ++ Y++L+  L K
Sbjct: 180 LNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK 239

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
               E+ + L + +    L PNV T++I I  L   G++D+A ++F  M++    P+++T
Sbjct: 240 KRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVT 299

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + +LI       +     EL  KMK     PD  I   ++D
Sbjct: 300 YTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLD 340



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 6/139 (4%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV         +  +   PD + +  +I GL    R+ EA AL+ ++R  G  PD++TY
Sbjct: 977  GRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTY 1036

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +L+  L        A  ++EE+           EP+  TY  +I G       + A  +
Sbjct: 1037 NSLMLNLGLAGMVEQAKRMYEELQLAG------LEPDVFTYNALIRGYSLSENPEHAYTV 1090

Query: 122  LLQMKDKNIKPNVVTYTSV 140
               M      PN+ TY  +
Sbjct: 1091 YKNMMVDGCNPNIGTYAQL 1109


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 242/466 (51%), Gaps = 12/466 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   + +L  +      P       +IKGLC   R  +A   F  +    C PD+ T+
Sbjct: 44  GKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITF 103

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+ L ++     A  +FE M   +      C PN VTYTT+I+GLCK+G +D+A EL
Sbjct: 104 NILVDALVKSGRVEEAFQIFESMHTSSQ-----CLPNVVTYTTVINGLCKDGKLDRAIEL 158

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +    PNV+TY+ ++ G C A   ++   L  EM  +G QP+V+ +N +++ LCK
Sbjct: 159 LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCK 218

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + ++DEA  L+ LMI+ G  P   TYN+L++ FC + +V+ A  L   M   GC   V +
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL----- 296
           Y+ +I G C++  ++ A +L  +M++    PDV+ ++T+  GL +  +V+  +KL     
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338

Query: 297 -FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
             + M++ G   +  TY   I+GLC+     +A+ L   +   +   D+ +++ +I  LC
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS  L+ A ++F  +      PN V Y+ +I GL   G++DKA  +F  M E +  P V 
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVA 457

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           T++ ++ G   +    + + ++  M      PD +    ++  L +
Sbjct: 458 TYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 231/446 (51%), Gaps = 14/446 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+ SLI GLC   ++ +A  L  ++R  G  P V  +  ++ GLC+      AL  
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK-DKNIKPNVVTYTS 139
           F+ +A      G  C P+ +T+  ++D L K G V++A ++   M       PNVVTYT+
Sbjct: 88  FKTVA------GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           VI G C     + A  L   M + G  PNV+T++V+++ LCK G+ D+   LL  M + G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +PD   YNTLL+G C + R++ A EL   M   GC  TV +Y+ L+  +C++K+++ A 
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L   M  +G  PDV+ +NT+  GL    +++ A  L  +M       D  TY T IDGL
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 320 CKNGYI------VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           CK+  +        A E+   ++   C  +   Y  +I+GLC++ + + AL L R +   
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            +VP++ ++S++IG LC    +D A  +F  M E    PN + +  LI G  +  E  K 
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441

Query: 434 IELLHKMKEINVMPDASIVSIVVDLL 459
           + +   M E +  P  +  + V+D L
Sbjct: 442 VRVFELMVE-SFRPGVATYNSVLDGL 466



 Score =  240 bits (613), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 216/405 (53%), Gaps = 16/405 (3%)

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           +N L R      A+ LF E           C PN  TY ++I GLCK G +D+A ELL +
Sbjct: 5   LNLLVRAGQHGQAVQLFREER---------CVPNEFTYGSLIHGLCKAGKLDQAYELLDE 55

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M+D+ I P V  +  VI+G C A  + +A   F  +      P+++TFN+++D L K+G+
Sbjct: 56  MRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115

Query: 185 MDEASRLLDLM-IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++EA ++ + M       P+  TY T+++G C  G+++ A EL   M   GC   V +YS
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +L+ G CK    +   +L  EM  +G +PDV+++NTL  GL +  +++ A +L   M R+
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G      TY + ++  C++  +  A  L   +    C  D+  YN++I GLC+  RL+ A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD------KARDLFLDMEENAVVPNVITF 417
             L + +     VP+V+TYS +I GLC D ++D       A ++   M++    PN  T+
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            ++I G  R  +  + + LL +M +  V+PD S  S+V+  L K+
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400



 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 228/449 (50%), Gaps = 16/449 (3%)

Query: 2   GRVSHGFVVLGRILKS--CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           GRV   F +   +  S  C  P+ VT+T++I GLC + ++  A  L   +   GC P+V 
Sbjct: 114 GRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY+ LV GLC+   T     L +EM     +      P+ + Y T+++GLCK   +D+A 
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ------PDVIMYNTLLNGLCKSRRLDEAL 226

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           EL+  M      P VVTY S++  FC +K  + A RL   M ++G  P+V+ +N ++  L
Sbjct: 227 ELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGL 286

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH------AKELFVSMESM 233
           C++ ++D+A  LL  M+     PD  TY+T++DG C   RV+       A E+   M+  
Sbjct: 287 CRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GC     +Y+++I G C+ ++ + AL+L   M+   + PD+   + +   L + H ++ A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
           +K+F  M       +   Y   IDGL K G + +AV +F  L +      +  YNS++DG
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDG 465

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LC  GR+E A+ +   +      P+  +Y  +I GLC    +++A +LF  +E       
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKE 442
           V  +++L+    +    S    + +K+ E
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 148/276 (53%), Gaps = 13/276 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRI-----MEAAA-LFTKLRVFGCE 55
            R+     +L +++ +   PD +T++++I GLC + R+     +EAA  +   ++  GC 
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP 349

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+  TY  ++ GLCR   +  AL L   M +      VV  P+  +++ +I  LCK   +
Sbjct: 350 PNAGTYAVVIEGLCRARKSQQALALLRRMIDSE----VV--PDLSSFSMVIGSLCKSHDL 403

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A ++   M ++  KPN V Y ++I G     + ++A R+F E+M +  +P V T+N +
Sbjct: 404 DAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSV 462

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D LC  G+++EA R+++ MI     PD  +Y  L+ G C    V  A ELF ++E+ G 
Sbjct: 463 LDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGF 522

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
              V  Y++L+N  CK K +  A  + ++++  G K
Sbjct: 523 AMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 126/257 (49%), Gaps = 4/257 (1%)

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N  L+     G+   A +LF       C    F+Y  LI+G CK  +++ A  L  EM  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +GI P V +HN +  GL +  +   A   F  +       D  T+   +D L K+G + E
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 328 AVELFHTLRIL-KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           A ++F ++    +C  ++  Y ++I+GLCK G+L+ A+EL   +      PNV+TYS+++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC  G+ DK   L  +M      P+VI ++ L+ G  +     + +EL+  M      
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 447 PDASIVSIVVDLLAKNE 463
           P     + +++L  +++
Sbjct: 239 PTVVTYNSLMELFCRSK 255



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 1   MGRVSHGF-VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +GR+     +V G I K CF PD  ++ +LI+GLC  S + EA  LF  +   G   +V 
Sbjct: 469 VGRIEEAVRMVEGMIHKECF-PDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527

Query: 60  TYTTLVNGLCR 70
            Y  LVN LC+
Sbjct: 528 VYNVLVNELCK 538


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 148/451 (32%), Positives = 230/451 (50%), Gaps = 30/451 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV+    +L  +      PDA TF  +I GLC   RI EAA +  ++ + G  PD  TY 
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGN----------------------------GEFGVV 94
            L+NGLC+      A +LF  +                                  +G+V
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
             P+  TY ++I G  KEG V  A E+L  M++K  KPNV +YT ++ GFC     +EA 
Sbjct: 387 --PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            +  EM   G++PN V FN ++   CK  ++ EA  +   M + G +PD +T+N+L+ G 
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C    + HA  L   M S G      +Y+ LIN + +  EI+ A  L +EM+ +G   D 
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +N+L  GL    +V++A  LF++M R+G A    +    I+GLC++G + EAVE    
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           + +     DI  +NSLI+GLC++GR+E  L +FR L    + P+ VT++ ++  LC  G 
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           +  A  L  +  E+  VPN  T+ +L++  I
Sbjct: 685 VYDACLLLDEGIEDGFVPNHRTWSILLQSII 715



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 230/442 (52%), Gaps = 11/442 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P++V + +LI  L   +R+ EA  L  ++ + GC PD  T+  ++ GLC+       +N 
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR----INE 305

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M N     G    P+ +TY  +++GLCK G VD AK+L  ++     KP +V + ++
Sbjct: 306 AAKMVNRMLIRGFA--PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTL 359

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I GF      ++AK +  +M+   G+ P+V T+N ++    K G +  A  +L  M   G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +P+ ++Y  L+DGFC  G+++ A  +   M + G K     ++ LI+ +CK   I  A+
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++ EM  KG KPDV   N+L  GL E+ +++ A  L  +M   GV A+T TY T I+  
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G I EA +L + +       D   YNSLI GLC++G ++ A  LF  +      P+ 
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           ++ +I+I GLC  G +++A +   +M      P+++TF+ LI G  R       + +  K
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           ++   + PD    + ++  L K
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCK 681



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 221/454 (48%), Gaps = 18/454 (3%)

Query: 13  RILKSC---FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           R + SC   F    V    L+ G C +     AA +F  +      P +FT+  ++   C
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKV----AANVFYDMLSRKIPPTLFTFGVVMKAFC 228

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
             +    AL+L  +M          C PN+V Y T+I  L K   V++A +LL +M    
Sbjct: 229 AVNEIDSALSLLRDMTKHG------CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+  T+  VI G C     NEA ++   M+ +G  P+ +T+  +M+ LCK G++D A 
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILING 248
            L   +     +P+   +NTL+ GF   GR++ AK +   M  S G    V +Y+ LI G
Sbjct: 343 DLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           Y K   +  AL +  +M +KG KP+V  +  L  G  ++ +++ A+ + +EM  +G+  +
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T  +   I   CK   I EAVE+F  +    C+ D+  +NSLI GLC+   ++ AL L R
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    +V N VTY+ +I      G++ +AR L  +M       + IT++ LI+G  R  
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           E  K   L  KM      P     +I+++ L ++
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 201/455 (44%), Gaps = 52/455 (11%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF-------------GVVCEPNTVTYT 103
           ++F++T   NG     H+     +       NGEF             G+V + +   + 
Sbjct: 96  ELFSWTGSQNGY---RHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESL--FI 150

Query: 104 TIIDGLCKEGFVDKAKELLLQMKD-KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD 162
           +I+    K GF  +   L+L+M++  + +P   +Y  V+           A  +F +M+ 
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
           + + P + TF V+M   C   ++D A  LL  M +HG  P++  Y TL+       RVN 
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
           A +L   M  MGC     +++ +I G CK   I  A  + + ML +G  PD + +  L  
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330

Query: 283 GLFEIHQVERAFKLF--------------------------------DEMQRNGVAADTW 310
           GL +I +V+ A  LF                                D +   G+  D  
Sbjct: 331 GLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY + I G  K G +  A+E+ H +R   C+ ++ +Y  L+DG CK G+++ A  +   +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               L PN V ++ +I   C + ++ +A ++F +M      P+V TF+ LI G   ++E 
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVD-LLAKNEI 464
              + LL  M    V+ +    + +++  L + EI
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 6/166 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D +T+ SLIKGLC    + +A +LF K+   G  P   +   L+NGLCR+     A+   
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM            P+ VT+ ++I+GLC+ G ++    +  +++ + I P+ VT+ +++
Sbjct: 623 KEMVLRGST------PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
              C      +A  L  E ++ G  PN  T+++++  +     +D 
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 228/436 (52%), Gaps = 7/436 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L +   PDA T T  IK  C   R   A  L   L   GC+     Y T+V GL    
Sbjct: 35  RMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHG 94

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           H   A +LF+EM   +        P+  T+  ++  LC++G + ++  LL ++  + +  
Sbjct: 95  HGYDARHLFDEMLRRD------VFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSV 148

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N  T    IRG C      EA  L +E MD  + P+VVT+N +M  LCK+ K+ EA++ L
Sbjct: 149 NKFTCNIWIRGLCEGGRLEEAVAL-VESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYL 207

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  G  PD FTYNT++DG+C    +  A EL       G      +Y  LING C  
Sbjct: 208 RRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAE 267

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            ++E AL L++E  +K +KPD+V++N+L  GL     +  A ++ +EM  +G   D WTY
Sbjct: 268 GDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTY 327

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+GLCK G I +A  + +   +     D+  +N++IDG CK  +L+ AL+L   +  
Sbjct: 328 NIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWM 387

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + P+ +TY+ ++ GLC  G+  +  + F +M      PN IT+++LI  F +IN+  +
Sbjct: 388 YGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 447

Query: 433 VIELLHKMKEINVMPD 448
              ++ +M +  ++PD
Sbjct: 448 ASGVIVRMSQDGLVPD 463



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 248/475 (52%), Gaps = 13/475 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+    V L   + +   PD VT+ +L++GLC +S++ EAA    ++   GC PD FTY
Sbjct: 164 GRLEEA-VALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTY 222

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G C+      A  L ++        G V  P+ VTY ++I+GLC EG V++A EL
Sbjct: 223 NTIIDGYCKRDMLQEATELLKDAIFK----GFV--PDRVTYCSLINGLCAEGDVERALEL 276

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + + K++KP++V Y S+++G C       A ++  EM++ G  P++ T+N++++ LCK
Sbjct: 277 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCK 336

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A+ +++  I  G  PD FT+NT++DG+C   +++ A +L   M   G      +
Sbjct: 337 MGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAIT 396

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++NG CK  + +     + EM+ KG +P+ + +N L     +I+Q+E A  +   M 
Sbjct: 397 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMS 456

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++G+  DT ++ T I G C+NG +  A  LF  L           +N LI        ++
Sbjct: 457 QDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQ 516

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A ++F  +      P++ TY +++ G C    +D+A     +M     VP++ TF  ++
Sbjct: 517 MAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVL 576

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
                 +  S+ + ++H M  + V+P+      VVD +   +    + P   V E
Sbjct: 577 NSLAMNHRVSEAVAIIHIMVRMGVVPE------VVDTILSTDKKEIAAPKILVEE 625



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 223/461 (48%), Gaps = 12/461 (2%)

Query: 2   GRVSHGFVVLGR-----ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG     R     +L+    PD  TF +++  LC +  IME+ AL  K+   G   
Sbjct: 89  GLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSV 148

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           + FT    + GLC       A+ L E M            P+ VTY T++ GLCK+  V 
Sbjct: 149 NKFTCNIWIRGLCEGGRLEEAVALVESM-------DAYIAPDVVTYNTLMRGLCKDSKVQ 201

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A + L +M ++   P+  TY ++I G+C      EA  L  + + +G  P+ VT+  ++
Sbjct: 202 EAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLI 261

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           + LC  G ++ A  L +      ++PD   YN+L+ G C  G + HA ++   M   GC 
Sbjct: 262 NGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCH 321

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             +++Y+I+ING CK   I  A  + ++ + KG  PDV   NT+  G  +  +++ A +L
Sbjct: 322 PDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQL 381

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            + M   G+A D  TY + ++GLCK G   E  E F  + +  C  +   YN LI+  CK
Sbjct: 382 VERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCK 441

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
             +LE A  +   +    LVP+ ++++ +I G C +G +D A  LF  ++E        T
Sbjct: 442 INQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADT 501

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           F++LI  +          ++  +M      PD     ++VD
Sbjct: 502 FNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVD 542



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 173/363 (47%), Gaps = 1/363 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C P    Y  I+D L    + D+A ++ ++M    + P+  T+T  I+ FC     + A 
Sbjct: 6   CPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVAL 65

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           RL   + ++G     + +  ++  L  +G   +A  L D M++  V PD  T+N +L   
Sbjct: 66  RLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHAL 125

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G +  +  L   +   G     F+ +I I G C+   +E A++L  E +   I PDV
Sbjct: 126 CQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALV-ESMDAYIAPDV 184

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +NTL  GL +  +V+ A +    M   G   D +TY T IDG CK   + EA EL   
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                   D   Y SLI+GLC  G +E ALELF       L P++V Y+ ++ GLC  G 
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 304

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +  A  +  +M E+   P++ T++++I G  ++   S    +++       +PD    + 
Sbjct: 305 ILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 364

Query: 455 VVD 457
           ++D
Sbjct: 365 MID 367



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 6/275 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +S   VV+   +   + PD  TF ++I G C   ++  A  L  ++ ++G  PD  T
Sbjct: 337 MGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAIT 396

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +++NGLC+          FEEM          C PN +TY  +I+  CK   +++A  
Sbjct: 397 YNSVLNGLCKAGKAKEVNETFEEMILKG------CRPNAITYNILIENFCKINQLEEASG 450

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++++M    + P+ +++ ++I GFC   D + A  LF ++ ++G      TFN+++    
Sbjct: 451 VIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYS 510

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
               M  A ++   MI  G +PD +TY  L+DG C    V+ A      M S G   ++ 
Sbjct: 511 SKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMA 570

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           ++  ++N    N  +  A+++   M+  G+ P+VV
Sbjct: 571 TFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 152/333 (45%), Gaps = 36/333 (10%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G  P    +N IMD L      D+A ++   M+  GV PDA T+   +  FC+TGR + A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV-----VIH- 277
             L  S+   GC     +Y  ++ G   +     A  L+ EML + + PDV     V+H 
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 278 -----------------------------NTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
                                        N    GL E  ++E A  L + M    +A D
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPD 183

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY T + GLCK+  + EA +    +    C  D   YN++IDG CK   L+ A EL +
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
                  VP+ VTY  +I GLC +G +++A +LF + +   + P+++ ++ L++G  R  
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                ++++++M E    PD    +IV++ L K
Sbjct: 304 LILHALQVMNEMVEDGCHPDIWTYNIVINGLCK 336



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 41/273 (15%)

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN----------- 278
           M+  GC     +Y+ +++        + A  +Y  MLS G+ PD   H            
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 279 ------------------------TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
                                   T+  GL+       A  LFDEM R  V  D  T+  
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY--NSLIDGLCKSGRLEIALELFRSLPC 372
            +  LC+ G I+E+  L    ++LK    +  +  N  I GLC+ GRLE A+ L  S+  
Sbjct: 121 VLHALCQKGDIMESGALL--AKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD- 177

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + P+VVTY+ ++ GLC D ++ +A      M     +P+  T++ +I G+ + +   +
Sbjct: 178 AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237

Query: 433 VIELLHKMKEINVMPD-ASIVSIVVDLLAKNEI 464
             ELL        +PD  +  S++  L A+ ++
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLINGLCAEGDV 270


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 141/427 (33%), Positives = 218/427 (51%), Gaps = 4/427 (0%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  S    VL  +     T D      +I  +C +  + E   +  KL +FGCE D+ +Y
Sbjct: 165 GGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSY 224

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV----CEPNTVTYTTIIDGLCKEGFVDK 117
             ++ GLC          L +EM   +     +    C P+   Y TIIDG+CKEG  + 
Sbjct: 225 NAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEV 284

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A E+L +M    +KPNVV Y +V++G C A  W +A+ L  EM  +    + VTFN+++D
Sbjct: 285 ANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVD 344

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
             C+NG +D    LL+ M++HG  PD  TY T+++GFC  G ++ A  L  +M S GCK 
Sbjct: 345 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKP 404

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              SY+I++ G C  +    A  L S M+ +G  P+ V  NT+   L +   VE+A +L 
Sbjct: 405 NTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELL 464

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            +M  NG   D  +Y T IDGL K G   EA+EL + +       ++  Y+S+   L + 
Sbjct: 465 KQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALARE 524

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GR++  +++F ++    +  + V Y+ +I  LC   + D A D    M  N  +PN  T+
Sbjct: 525 GRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTY 584

Query: 418 DMLIRGF 424
             LI+G 
Sbjct: 585 TALIKGL 591



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 229/486 (47%), Gaps = 51/486 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T+  +++GLC   RI +A A+  ++    C P    Y  ++   CR+     AL +
Sbjct: 114 PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRV 173

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E +             +T     +I+ +C +G VD+  E+L ++     + ++V+Y +V
Sbjct: 174 LEALHAKGSTL------DTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAV 227

Query: 141 IRGFCYAKDWNEAKRLFIEMM----------DQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           ++G C AK W + + L  EM+            G  P++  +  I+D +CK G  + A+ 
Sbjct: 228 LKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANE 287

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-------------------- 230
           +L  M  +G++P+   YNT+L G C   R   A+EL   M                    
Sbjct: 288 ILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFC 347

Query: 231 ------------ESM---GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
                       E M   GC   V +Y+ +ING+CK   I+ A+ L   M S G KP+ +
Sbjct: 348 QNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTI 407

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +  +  GL    +   A +L   M + G   +  T+ T I+ LCK G + +A+EL   +
Sbjct: 408 SYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQM 467

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
            +  C  D+ +Y+++IDGL K+G+ E ALEL   +    + PNV+TYS M   L  +G++
Sbjct: 468 LVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRI 527

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           DK   +F ++++  +  + + ++ +I    +  E    I+ L  M     MP+ S  + +
Sbjct: 528 DKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTAL 587

Query: 456 VDLLAK 461
           +  LA 
Sbjct: 588 IKGLAS 593



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 211/414 (50%), Gaps = 16/414 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL----------FTKLRV 51
           G V  G  +L ++       D V++ +++KGLCA  R  +   L           +++  
Sbjct: 200 GCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQ 259

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
            GC PD+  Y T+++G+C+  H  VA  +   M +    +G+  +PN V Y T++ G+C 
Sbjct: 260 HGCTPDIRMYATIIDGICKEGHHEVANEILSRMPS----YGL--KPNVVCYNTVLKGICS 313

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
               +KA+ELL +M  KN   + VT+  ++  FC     +    L  +M++ G  P+V+T
Sbjct: 314 ADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVIT 373

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  +++  CK G +DEA  LL  M   G +P+  +Y  +L G C T R   A+EL   M 
Sbjct: 374 YTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMI 433

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             GC     +++ +IN  CK   +E A+ L  +ML  G  PD++ ++T+  GL +  + E
Sbjct: 434 QQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTE 493

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +L + M   G+  +  TY +    L + G I + +++F  ++      D   YN++I
Sbjct: 494 EALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVI 553

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
             LCK    ++A++    +     +PN  TY+ +I GL ++G + +A+DL  ++
Sbjct: 554 SSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 190/445 (42%), Gaps = 57/445 (12%)

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+  LC    T  A+   +   N  G          V Y  ++ G C+ G V+ A+ L
Sbjct: 56  SALIRSLCVAGRTADAVRALDAAGNAAG---------VVDYNAMVAGYCRVGQVEAARRL 106

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +    + PN  TY  V+RG C      +A  +  EM  +   P    ++VI++  C+
Sbjct: 107 AAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACR 163

Query: 182 NGKMDEASRLLDLMIQH-----------------------------------GVRPDAFT 206
           +G    A R+L+ +                                      G   D  +
Sbjct: 164 SGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVS 223

Query: 207 YNTLLDGFCLTGRVNHAKEL----------FVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           YN +L G C   R    +EL             M   GC   +  Y+ +I+G CK    E
Sbjct: 224 YNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHE 283

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  + S M S G+KP+VV +NT+  G+    + E+A +L  EM +     D  T+   +
Sbjct: 284 VANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILV 343

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D  C+NG +   +EL   +    C  D+  Y ++I+G CK G ++ A+ L +++P     
Sbjct: 344 DFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCK 403

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN ++Y+I++ GLC+  +   A +L   M +   +PN +TF+ +I    +     + IEL
Sbjct: 404 PNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIEL 463

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
           L +M      PD    S V+D L K
Sbjct: 464 LKQMLVNGCNPDLISYSTVIDGLGK 488



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 132/301 (43%), Gaps = 16/301 (5%)

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
            + ++  LC  G+  +A R LD     G       YN ++ G+C  G+V  A+ L  ++ 
Sbjct: 55  LSALIRSLCVAGRTADAVRALD---AAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
                   ++Y  ++ G C    I  AL++  EM S+   P   +++ +           
Sbjct: 112 ---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A ++ + +   G   DT      I+ +C  G + E +E+   L +  CE DI +YN+++
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228

Query: 352 DGLCKSGRLEIALEL----------FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            GLC + R     EL             +      P++  Y+ +I G+C +G  + A ++
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              M    + PNV+ ++ +++G    +   K  ELL +M + N   D    +I+VD   +
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQ 348

Query: 462 N 462
           N
Sbjct: 349 N 349


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 210/381 (55%), Gaps = 6/381 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           DA T  +LI+GLC   R   A A+  ++    C PDV TYT L+   C+ S    A+ L 
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 218

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM +        C P+ VTY  +++G+C+EG VD A E L  +     +PN V+Y  V+
Sbjct: 219 DEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G C A+ W +A+ L  EM  +G  PNVVTFN+++  LC+ G ++ A  +L+ + ++G  
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS 332

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P++ +YN LL  FC   +++ A      M S GC   + SY+ L+   C++ E++ A+ L
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             ++  KG  P ++ +NT+  GL +  + + A +L +EM   G+  D  TY T   GLC+
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 452

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
              I +A+  F  ++ +    +   YN++I GLCK      A++LF  +     +PN  T
Sbjct: 453 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 512

Query: 382 YSIMIGGLCNDGQMDKARDLF 402
           Y+I+I GL  +G + +ARDL 
Sbjct: 513 YTILIEGLAYEGLIKEARDLL 533



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 226/448 (50%), Gaps = 14/448 (3%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R++ S   PDA T  +LIK L A  R  EA  +        C PDV  Y  ++ G C   
Sbjct: 88  RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMMAGYCGAG 142

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A     E A          E +  T  T+I GLC  G    A  +L +M  +   P
Sbjct: 143 QVDAARRWCAERA---------VERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVP 193

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +VVTYT ++   C    + +A +L  EM D+G  P++VT+NV+++ +C+ G++D+A   L
Sbjct: 194 DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL 253

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             +  +G  P+  +YN +L G C   R   A+EL   M   GC   V ++++LI+  C+ 
Sbjct: 254 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 313

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +E AL +  ++   G  P+ + +N L     +  ++++A    D M   G   D  +Y
Sbjct: 314 GLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 373

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T +  LC++G +  AVEL H L+   C   + +YN++IDGL K+G+ + ALEL   +  
Sbjct: 374 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 433

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L P+++TYS +  GLC + +++ A   F  +++  + PN + ++ +I G  +  E   
Sbjct: 434 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 493

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLA 460
            I+L   M     MP+ S  +I+++ LA
Sbjct: 494 AIDLFAYMIGNGCMPNESTYTILIEGLA 521



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 197/369 (53%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR ++   VL  +L+    PD VT+T L++  C  S   +A  L  ++R  GC PD+ TY
Sbjct: 174 GRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTY 233

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +VNG+C+      A+   + + +    +G  CEPNTV+Y  ++ GLC     + A+EL
Sbjct: 234 NVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTVSYNIVLKGLCTAERWEDAEEL 287

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M  K   PNVVT+  +I   C       A  +  ++   G  PN +++N ++   CK
Sbjct: 288 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCK 347

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             KMD+A   LDLM+  G  PD  +YNTLL   C +G V+ A EL   ++  GC   + S
Sbjct: 348 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 407

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K  + + AL L +EM+SKG++PD++ ++T+  GL    ++E A + F ++Q
Sbjct: 408 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 467

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +T  Y   I GLCK      A++LF  +    C  +   Y  LI+GL   G ++
Sbjct: 468 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK 527

Query: 362 IALELFRSL 370
            A +L   L
Sbjct: 528 EARDLLDEL 536



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 205/427 (48%), Gaps = 16/427 (3%)

Query: 49  LRVFGC--EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTII 106
           LR+ G    PD  T   L+  L  +  T  A  +              C P+ + Y  ++
Sbjct: 87  LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----------AACGPDVMAYNAMM 135

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
            G C  G VD A+       ++ ++ +  T  ++IRG C       A  +  EM+ +   
Sbjct: 136 AGYCGAGQVDAARRWC---AERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCV 192

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P+VVT+ ++++  CK     +A +LLD M   G  PD  TYN +++G C  GRV+ A E 
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 252

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
             ++ S GC+    SY+I++ G C  +  E A  L  EM  KG  P+VV  N L   L  
Sbjct: 253 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 312

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              VE A ++ +++ + G + ++ +Y   +   CK   + +A+     +    C  DI +
Sbjct: 313 KGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 372

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           YN+L+  LC+SG +++A+EL   L      P +++Y+ +I GL   G+  +A +L  +M 
Sbjct: 373 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 432

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
              + P++IT+  +  G  R +     I    K++++ + P+  + + ++  L K   + 
Sbjct: 433 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 492

Query: 467 NSLPSFT 473
           +++  F 
Sbjct: 493 SAIDLFA 499



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 155/303 (51%), Gaps = 6/303 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV      L  +      P+ V++  ++KGLC   R  +A  L  ++   GC P+V T+
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ LCR      AL + E++     ++G  C PN+++Y  ++   CK+  +DKA   
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIP----KYG--CSPNSLSYNPLLHAFCKQKKMDKAMAF 357

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  +   P++V+Y +++   C + + + A  L  ++ D+G  P ++++N ++D L K
Sbjct: 358 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 417

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK  EA  LL+ M+  G++PD  TY+T+  G C   R+  A   F  ++ MG +     
Sbjct: 418 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVL 477

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I G CK +E   A+ L++ M+  G  P+   +  L  GL     ++ A  L DE+ 
Sbjct: 478 YNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELC 537

Query: 302 RNG 304
             G
Sbjct: 538 SRG 540



 Score = 41.6 bits (96), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 38/89 (42%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+       G++      P+ V + ++I GLC       A  LF  +   GC P+  TYT
Sbjct: 455 RIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYT 514

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEF 91
            L+ GL        A +L +E+ +   E 
Sbjct: 515 ILIEGLAYEGLIKEARDLLDELCSRGEEI 543


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 234/461 (50%), Gaps = 11/461 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+   G  +L + LK  F PD   +TS+I G C    +      + +        DV +Y
Sbjct: 56  GQPQVGHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISY 111

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TT++ GL  +     A  LFEE+          C PN V YT +IDGL K G ++   + 
Sbjct: 112 TTVIKGLADSKRIDEACELFEELKTAG------CSPNVVAYTAVIDGLLKAGRIEDGLKN 165

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M   +  P   TYT VI G C A+   +A ++F +M+ +G  P+ +T+  ++D   K
Sbjct: 166 FEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 225

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             KMDEA +LLD+M+  G  P A TY +++ GFC    +N AKE+   M   GC+  +F 
Sbjct: 226 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 285

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ L++ Y      E A  + +EM ++G  PDV+++ +L   LF   +V  A  +FD M 
Sbjct: 286 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 345

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G A D  TY T I    K G +  A E+   +       D  AYNSL+DG  K  R++
Sbjct: 346 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVD 405

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDML 420
            A  ++  +    + PN VT+++++ GL  DG+ D+A  LF +M E+  V P ++++ +L
Sbjct: 406 QAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTIL 465

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I G  +    S+      +M +  ++P+    + ++  LAK
Sbjct: 466 IDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAK 506



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 218/424 (51%), Gaps = 7/424 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+  G      +  S   P   T+T +I GLC    + +A  +F ++   GC PD  TY
Sbjct: 157 GRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 216

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++G  + S    A  L + M     E      P  VTY +I+ G CK   +++AKE+
Sbjct: 217 TTLIDGFSKASKMDEARKLLDVMLTKGPE------PTAVTYGSIVHGFCKLDMINEAKEV 270

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + QM+++  +P +  +TS++  +       EA ++  EM  +G  P+V+ +  ++D L  
Sbjct: 271 IAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 330

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA  + D MI+ G  PDA TY T++  F   G V  A E+   M   G     F+
Sbjct: 331 TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFA 390

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM- 300
           Y+ L++GY K + ++ A  +Y  M++ GIKP+ V  N L  GLF+  + +RAF LF EM 
Sbjct: 391 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML 450

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           ++  V     +Y   IDGL K G + EA   F  +       +   Y SLI  L K+GR+
Sbjct: 451 EKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRI 510

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A +L   +    + P+V  YS +I GL +   +D A D+F +M +    PN +T+ +L
Sbjct: 511 PEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570

Query: 421 IRGF 424
            RGF
Sbjct: 571 RRGF 574



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 234/482 (48%), Gaps = 37/482 (7%)

Query: 4   VSHGFVVLGRILKSCF---TP----DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           V HG+   G +    F   TP    D +++T++IKGL    RI EA  LF +L+  GC P
Sbjct: 82  VIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSP 141

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGN-----GEFGVV----------------- 94
           +V  YT +++GL +       L  FEEM+  +       + VV                 
Sbjct: 142 NVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF 201

Query: 95  -------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                  C P+T+TYTT+IDG  K   +D+A++LL  M  K  +P  VTY S++ GFC  
Sbjct: 202 EQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKL 261

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
              NEAK +  +M ++G +P +  F  ++      G+ +EA ++L  M   G  PD   Y
Sbjct: 262 DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILY 321

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
            +L+D    TGRV  A+ +F SM   GC     +Y  +I  + K   +E A  +   M  
Sbjct: 322 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 381

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            G+ PD   +N+L  G  ++ +V++AF ++D M  +G+  +  T+   + GL K+G    
Sbjct: 382 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 441

Query: 328 AVELF-HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           A  LF   L   +    + +Y  LIDGL K+GR+  A   F+ +    ++P   TY+ +I
Sbjct: 442 AFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLI 501

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L   G++ +A+ L  DM +  V P+V  +  LI G I  +      ++  +M +    
Sbjct: 502 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 561

Query: 447 PD 448
           P+
Sbjct: 562 PN 563



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 181/401 (45%), Gaps = 33/401 (8%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           CEP  V+Y T+I GL     +D+A +    M D   +P+V+ +T++I GFC A       
Sbjct: 3   CEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGH 62

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNG------------------------------- 183
           +L  + + +  +P+V  +  ++   CK G                               
Sbjct: 63  KLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121

Query: 184 -KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++DEA  L + +   G  P+   Y  ++DG    GR+    + F  M    C  T  +Y
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +++I+G CK + +  A  ++ +M+ KG  PD + + TL  G  +  +++ A KL D M  
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G      TY + + G CK   I EA E+   +R   CE  +  + SL+      GR E 
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 301

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A ++   +      P+V+ Y+ +I  L + G++ +AR +F  M E    P+ +T+  +I+
Sbjct: 302 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 361

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            F +I       E+L  M +  V PD    + ++D   K E
Sbjct: 362 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 402



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 166/341 (48%), Gaps = 9/341 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P AVT+ S++ G C    I EA  +  ++R  GCEP +F +T+L++          A  +
Sbjct: 246 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 305

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
             EM A G       C P+ + YT++ID L   G V +A+ +   M +K   P+ +TY +
Sbjct: 306 LTEMTARG-------CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 358

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I+ F    +   A  +   M   GV P+   +N +MD   K  ++D+A  + D M+  G
Sbjct: 359 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 418

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGA 258
           ++P+A T+N L+ G    G+ + A  LF  M E      T+ SY+ILI+G  K   +  A
Sbjct: 419 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEA 478

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
              + EM+ +GI P+   + +L   L +  ++  A KL ++M + GV  D   Y   I G
Sbjct: 479 FLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 538

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           L  +  +  A ++F  +    C  +   Y  L  G   +GR
Sbjct: 539 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 579



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 146/284 (51%), Gaps = 4/284 (1%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G +P +V++N ++  L    KMDEA +  + MI +G  PD   + TL+ GFC  G+    
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            +L ++      +  VF Y+ +I+GYCK  +++     Y   ++     DV+ + T+  G
Sbjct: 62  HKL-LNQALKRFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKG 117

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L +  +++ A +LF+E++  G + +   Y   IDGL K G I + ++ F  +    C   
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              Y  +IDGLCK+  L  A ++F  +     VP+ +TY+ +I G     +MD+AR L  
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            M      P  +T+  ++ GF +++  ++  E++ +M+E    P
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEP 281



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 115/255 (45%), Gaps = 31/255 (12%)

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           MGC+ T+ SY+ +I+G     +++ A   ++ M+  G +PDV+   TL  G  +  Q + 
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 293 AFKLFDEMQRN-------------------------------GVAADTWTYRTFIDGLCK 321
             KL ++  +                                  + D  +Y T I GL  
Sbjct: 61  GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           +  I EA ELF  L+   C  ++ AY ++IDGL K+GR+E  L+ F  +     VP   T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+++I GLC    +  A  +F  M +   VP+ IT+  LI GF + ++  +  +LL  M 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 442 EINVMPDASIVSIVV 456
                P A     +V
Sbjct: 241 TKGPEPTAVTYGSIV 255



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 5/220 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V     +L  + KS   PD   + SL+ G     R+ +A  ++ ++   G +P+  T
Sbjct: 366 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 425

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  L++GL +   T  A +LF+EM            P  V+YT +IDGL K G V +A  
Sbjct: 426 FNVLMHGLFKDGKTDRAFSLFKEMLEKE-----EVPPTLVSYTILIDGLGKAGRVSEAFL 480

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I P   TYTS+I     A    EAK+L  +M+  GV P+V  ++ ++  L 
Sbjct: 481 QFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLI 540

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +  +D A  +   M++ G  P+  TY  L  GF   GR 
Sbjct: 541 DSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 580


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 161/493 (32%), Positives = 245/493 (49%), Gaps = 49/493 (9%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +  S F  +AV  T+L+KGLC   R++EA   F  +    C PDV TYT LV+ LC
Sbjct: 79  LLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALC 137

Query: 70  RTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCK----------------- 111
           +      A  +  EM A G       C P+TVT++T+IDGLCK                 
Sbjct: 138 KAGKFDEAQGMLREMVAQG-------CAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQR 190

Query: 112 -EGFVDKAKELLLQ------------------MKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
             G  D A E ++Q                  +  K   P V+ +  VI GFC AKD + 
Sbjct: 191 GMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDS 250

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A +L   M+++G  PNV TF +++  LCK  ++ EA +LL+ M+  G  P+  TY+T+++
Sbjct: 251 AYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVIN 310

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C  G+V+ A ELF  ME   C   V +++ILI+G CK K IE A  LY  M   G  P
Sbjct: 311 GLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAP 370

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV-AADTWTYRTFIDGLCKNGYIVEAVEL 331
           D++ +N+L  GL +  QV+ AF+LF  +  +GV AA+  TY T   G    G + +A  +
Sbjct: 371 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI 430

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  L       D+  Y SLI   CK+ R    +EL   +      P V T S ++GGL  
Sbjct: 431 FSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFE 490

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM---KEINVMPD 448
               ++A  LF  M       + + +++++ G  R ++  K + +L ++   ++    P 
Sbjct: 491 GNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPS 550

Query: 449 ASIVSIVVDLLAK 461
           +S V  +V+ L +
Sbjct: 551 SSAVDALVESLCQ 563



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 232/478 (48%), Gaps = 45/478 (9%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VLG ++   FTP  + F  +I G C    +  A  L   +   GC P+VFT+T L+ GLC
Sbjct: 219 VLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLC 278

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           + +    A  L E+M  G       C PN VTY+T+I+GLCK+G VD A EL   M+ +N
Sbjct: 279 KANRVGEAQQLLEKMVMGG------CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PNVVT+  +I G C AK   EA++L+  M + G  P+++T+N ++D LCK+ ++DEA 
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 392

Query: 190 RLLDLMIQHGVRP-DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           +L   + + GV   +A TY+TL  G+   GR+  A  +F  +   G    + +Y+ LI  
Sbjct: 393 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 452

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           YCK       + L  EM SKG  P V   + +  GLFE +  ERA +LFD M   G   D
Sbjct: 453 YCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDD 512

Query: 309 TWTYRTFIDG--------------------------------------LCKNGYIVEAVE 330
              Y   ++G                                      LC+ G   +A +
Sbjct: 513 ALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQ 572

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L H +        + +YN L+ GL +  R + A ++F ++      P + T +++I  LC
Sbjct: 573 LLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLC 632

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  ++D A +L   M +    P++ T + LI G+ +        +LL +M E  + P+
Sbjct: 633 SAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 690



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/461 (32%), Positives = 234/461 (50%), Gaps = 44/461 (9%)

Query: 33  LCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFG 92
           LC  +R  EA ALF       C P+ FTY  L+ G        +A+ L EEM +      
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSG---- 87

Query: 93  VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              E N V +TT++ GLC  G V +A E    M  K+  P+V+TYT+++   C A  ++E
Sbjct: 88  --FEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDE 144

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV------------ 200
           A+ +  EM+ QG  P+ VTF+ ++D LCK G  ++A R+L+ +IQ G+            
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQ 204

Query: 201 ------------------------RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
                                    P    +N +++GFC    ++ A +L   M   GC 
Sbjct: 205 RLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV 264

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             VF+++ILI G CK   +  A  L  +M+  G  P+VV ++T+  GL +  QV+ A++L
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL 324

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F  M+R     +  T+   IDGLCK   I EA +L+H +R   C  DI  YNSLIDGLCK
Sbjct: 325 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384

Query: 357 SGRLEIALELFRSLP-CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           S +++ A +LF+++P  GV   N VTYS +  G    G+M  A  +F  + +    P++ 
Sbjct: 385 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLA 444

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           T+  LI  + + +   +V+EL+ +M      P  + +S V+
Sbjct: 445 TYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVL 485



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 214/439 (48%), Gaps = 45/439 (10%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           +VF+    ++ LCR +    AL LF            +C PN  TY  +I G    G +D
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRN------AMARICMPNKFTYGILIRGFSSAGDLD 74

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
            A +LL +MK    + N V +T++++G C A    EA   F   M +   P+V+T+  ++
Sbjct: 75  IAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHF-RAMAKDCAPDVMTYTALV 133

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL---------- 226
             LCK GK DEA  +L  M+  G  PD  T++TL+DG C  G    A  +          
Sbjct: 134 HALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMG 193

Query: 227 ----------------FVSME----------SMGCKHTVFSYSILINGYCKNKEIEGALS 260
                           + S+E          + G   TV  ++++ING+CK K+++ A  
Sbjct: 194 NSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYK 253

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L   M+ KG  P+V     L  GL + ++V  A +L ++M   G + +  TY T I+GLC
Sbjct: 254 LLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLC 313

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + +A ELF  +    C  ++  +N LIDGLCK+ R+E A +L+  +      P+++
Sbjct: 314 KQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDII 373

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAV-VPNVITFDMLIRGFIRINEPSKVIELLHK 439
           TY+ +I GLC   Q+D+A  LF  + E+ V   N +T+  L  G+  +   +    +   
Sbjct: 374 TYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSM 433

Query: 440 MKEINVMPD-ASIVSIVVD 457
           + +    PD A+  S++++
Sbjct: 434 LVDKGFSPDLATYTSLILE 452



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 169/366 (46%), Gaps = 2/366 (0%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  +    +D LC+     +A  L      +   PN  TY  +IRGF  A D + A +L 
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM   G + N V    +M  LC  G++ EA      M +    PD  TY  L+   C  
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKA 139

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G+ + A+ +   M + GC     ++S LI+G CK    E A  +  +++ +G+       
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 278 NTLFVGLF-EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            T+   L  + + VE A K+   +   G       +   I+G CK   +  A +L   + 
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C  ++  +  LI GLCK+ R+  A +L   +  G   PNVVTYS +I GLC  GQ+D
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVD 319

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A +LF  ME     PNV+T ++LI G  +     +  +L H+M+E    PD    + ++
Sbjct: 320 DAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLI 379

Query: 457 DLLAKN 462
           D L K+
Sbjct: 380 DGLCKS 385



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 142/288 (49%), Gaps = 19/288 (6%)

Query: 6   HGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG+  LGR+  +C          F+PD  T+TSLI   C  SR +E   L  ++   G  
Sbjct: 416 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 475

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P V T + ++ GL   +HT  A+ LF+ MA         C  + + Y  +++G+ +    
Sbjct: 476 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG------CTDDALIYNLVVEGMARASKH 529

Query: 116 DKAKELLLQM---KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           DKA  +L Q+   +D+   P+     +++   C     ++AK+L  +M ++G    V ++
Sbjct: 530 DKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSY 589

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++  L +  + DEA+++ + M+  G  P+  T N ++   C   +V+ A EL   M  
Sbjct: 590 NRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 649

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           +GC   + + + LI GYCK+   + A  L  EM   G++P+   H+ L
Sbjct: 650 LGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 154/379 (40%), Gaps = 68/379 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   + +   + +    P+ VT   LI GLC   RI EA  L+ ++R  GC PD+ TY
Sbjct: 316 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 375

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGN-------------------GEFGVVCE------ 96
            +L++GLC++     A  LF+ +                       G     C       
Sbjct: 376 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 435

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+  TYT++I   CK     +  EL+ +M  K   P V T ++V+ G        
Sbjct: 436 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 495

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMD---------------------------------- 177
            A +LF  M  +G   + + +N++++                                  
Sbjct: 496 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVD 555

Query: 178 ----ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
                LC+ GK D+A +LL  M + G      +YN LL G     R + A ++F +M S 
Sbjct: 556 ALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSA 615

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G    + + +++I+  C   +++ A  L   M   G  PD+   NTL  G  +  + + A
Sbjct: 616 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLA 675

Query: 294 FKLFDEMQRNGVAADTWTY 312
            KL +EM   G+  +  T+
Sbjct: 676 RKLLEEMTEAGLEPNDTTH 694



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 37/261 (14%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           H VFS +  ++  C+    + AL+L+   +++   P+   +  L  G      ++ A +L
Sbjct: 20  HNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQL 79

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            +EM+ +G   +   + T + GLC  G +VEA+E F  +    C  D+  Y +L+  LCK
Sbjct: 80  LEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCK 138

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV------ 410
           +G+ + A  + R +      P+ VT+S +I GLC  G  ++A  +  D+ +  +      
Sbjct: 139 AGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAA 198

Query: 411 ------------------------------VPNVITFDMLIRGFIRINEPSKVIELLHKM 440
                                          P V+ F+++I GF +  +     +LL  M
Sbjct: 199 FETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVM 258

Query: 441 KEINVMPDASIVSIVVDLLAK 461
            E   +P+    +I++  L K
Sbjct: 259 IEKGCVPNVFTFTILITGLCK 279



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 6/137 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      +L ++ +  F     ++  L+ GL    R  EA  +F  +   G  P++ T
Sbjct: 564 VGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 623

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
              +++ LC  +    A  L + M+       + C P+  T  T+I G CK G  D A++
Sbjct: 624 VNVVISWLCSAAKVDDAYELVQRMSK------LGCCPDIETCNTLIGGYCKSGRADLARK 677

Query: 121 LLLQMKDKNIKPNVVTY 137
           LL +M +  ++PN  T+
Sbjct: 678 LLEEMTEAGLEPNDTTH 694



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           E V LF      +   ++ + N  +D LC+  R + AL LFR+    + +PN  TY I+I
Sbjct: 5   ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI--N 444
            G  + G +D A  L  +M+ +    N +    L++G     +  +V+E L   + +  +
Sbjct: 65  RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLC---DAGRVVEALEHFRAMAKD 121

Query: 445 VMPDASIVSIVVDLLAK 461
             PD    + +V  L K
Sbjct: 122 CAPDVMTYTALVHALCK 138


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 137/407 (33%), Positives = 224/407 (55%), Gaps = 6/407 (1%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           +V+T   +VN LC+            EM     E GV  +   VTY T+++  C+ G V 
Sbjct: 223 NVYTLNIMVNALCKDGKLDNVGVYLSEME----EKGVYAD--LVTYNTLVNAYCRRGLVS 276

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  L+  M  K +KP + TY ++I G C    +  AKR+  EM+  G+ PN  TFN ++
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
            E C+   + EA R+ + M+Q GV PD  ++++++  F   G +  A   F  M+ +G  
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV 396

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
                Y+ILINGYC+N ++ GAL + +EM+ +G   DVV +NTL  GL     ++ A +L
Sbjct: 397 PDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADEL 456

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F EM   GV  D +T  T I G CK+G + +A+ LF T+ +   + D+  YN+L+DG CK
Sbjct: 457 FKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCK 516

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G +E A EL+  +    + P+ +++SI+I G C+ G + +A  L+ +M+E  + P ++T
Sbjct: 517 VGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 576

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            + +I+G++R    SK  + L+ M    V PD    + +++   K E
Sbjct: 577 CNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEE 623



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 249/512 (48%), Gaps = 44/512 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V   + V    +KS    +  T   ++  LC + ++       +++   G   D+ T
Sbjct: 202 VGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVT 261

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TLVN  CR      A  L + MA G G      +P   TY  +I+GLCKEG  ++AK 
Sbjct: 262 YNTLVNAYCRRGLVSEAFGLVDCMA-GKG-----LKPGLFTYNALINGLCKEGSYERAKR 315

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN------- 173
           +L +M    + PN  T+  ++   C  +D  EA+R+F EM+ +GV P++++F+       
Sbjct: 316 VLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFS 375

Query: 174 ----------------------------VIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                                       ++++  C+N  +  A ++ + M++ G   D  
Sbjct: 376 RNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVV 435

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYNTLL+G C    ++ A ELF  M   G     ++ + LI+GYCK+  +  ALSL+  M
Sbjct: 436 TYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETM 495

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             + +KPDVV +NTL  G  ++ ++E+A +L+ +M    +     ++   I+G C  G +
Sbjct: 496 TLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLV 555

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA  L+  ++    +  +   N++I G  ++G L  A +   ++    + P+ +TY+ +
Sbjct: 556 SEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTL 615

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I     +   D+A  L  +MEE  ++PN++T++ ++ GF R     +   +LHKM +  +
Sbjct: 616 INSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGI 675

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
            PD S  + +++     +   N   +F VH++
Sbjct: 676 NPDKSTYTSLINGYVSKD---NMKEAFRVHDE 704



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 225/447 (50%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G VS  F ++  +      P   T+ +LI GLC E     A  +  ++   G  P+  T+
Sbjct: 273 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATF 332

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++   CR      A  +F EM     + GVV  P+ +++++I+    + G + +A   
Sbjct: 333 NPMLVESCRKEDVWEAERVFNEML----QRGVV--PDLISFSSIVGVFSRNGELGRALAY 386

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK   + P+ V YT +I G+C   D + A ++  EM+++G   +VVT+N +++ LC+
Sbjct: 387 FEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCR 446

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              +D+A  L   M++ GV PD +T  TL+ G+C  G +  A  LF +M     K  V +
Sbjct: 447 GKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVT 506

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G+CK  E+E A  L+ +M+S+ I P  +  + L  G   +  V  AF+L+DEM+
Sbjct: 507 YNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMK 566

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+     T  T I G  + G + +A +  +T+       D   YN+LI+   K    +
Sbjct: 567 EKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFD 626

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L  ++    L+PN+VTY+ ++GG    G+M +A  +   M +  + P+  T+  LI
Sbjct: 627 RAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLI 686

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G++  +   +   +  +M +   +PD
Sbjct: 687 NGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 173/380 (45%), Gaps = 20/380 (5%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN--------------------IKPNVVT 136
           PN     T+I  L +   + +A+ LLL++  K+                       NVV 
Sbjct: 97  PNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVV 156

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           +  +IR +  A+   E    F  +  +G   ++   N ++  + K G +D A ++ +  +
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G   + +T N +++  C  G++++       ME  G    + +Y+ L+N YC+   + 
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L   M  KG+KP +  +N L  GL +    ERA ++ DEM   G+  +  T+   +
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
              C+   + EA  +F+ +       D+ +++S++    ++G L  AL  F  +    LV
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV 396

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+ V Y+I+I G C +  +  A  +  +M E   V +V+T++ L+ G  R        EL
Sbjct: 397 PDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADEL 456

Query: 437 LHKMKEINVMPDASIVSIVV 456
             +M E  V PD   ++ ++
Sbjct: 457 FKEMVERGVFPDFYTLTTLI 476


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 242/491 (49%), Gaps = 37/491 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+      +  ++KS   P   TFT LI  L     I EA   F  ++   C P+V TY
Sbjct: 301 GRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTY 360

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTLVNGL +      A  +F EM   N      C P+ + Y T+IDGL K G  D A  L
Sbjct: 361 TTLVNGLAKAGRLEEACEVFVEMKENN------CSPDAIAYNTLIDGLGKAGEADMACGL 414

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MKD+ + PN+ TY  +I     A    EA +LF ++ +QG  P+V T+N ++D L K
Sbjct: 415 FKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGK 474

Query: 182 NGKMDEASRLLDLMIQHG----VRPDA---------------------------FTYNTL 210
            G+MD+   ++  M++ G    +  D+                            TYNTL
Sbjct: 475 GGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTL 534

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           +  F   G V+ A +L   M+   C  TV +Y+ L++G  K   ++ A+SL  EM  +G 
Sbjct: 535 MSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGC 594

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           +P VV +++L    ++  Q E +  LFDEM R G  AD  TY   I+ LCK+  + +A++
Sbjct: 595 EPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALD 654

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +F  ++    E  +  Y +L+  L K  +++ AL++F  L    LVP+   Y+IM+ GL 
Sbjct: 655 VFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLV 714

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
              ++D+A  L   M+   ++P++ T+  L+ G  +     +   +  KM E    PD  
Sbjct: 715 KSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVV 774

Query: 451 IVSIVVDLLAK 461
             + ++D+L K
Sbjct: 775 AYTSLMDVLGK 785



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 247/460 (53%), Gaps = 6/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L  + K    P  VT+T+L+ GL    R+ EA +L  ++   GCEP V TY
Sbjct: 542 GHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTY 601

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L+    +      +L+LF+EM          C  +  TY+ +I+ LCK   VD+A ++
Sbjct: 602 SSLMASFYKRDQEEESLSLFDEMVRKG------CVADVSTYSLVINCLCKSDDVDQALDV 655

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK++ ++P +  Y +++      +  + A ++F E+ +  + P+   +N++++ L K
Sbjct: 656 FGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVK 715

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + ++DEA +L+D M    + PD FTY +LLDG   +GR+  A  +F  M   G +  V +
Sbjct: 716 SNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVA 775

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++   K  ++  AL ++  M  K   PDVV +++L   L +  +VE A+  F+   
Sbjct: 776 YTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSI 835

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   +   Y + ID   K G +  A+ELF  ++  +C  +I  YN+L+ GL K+GRL 
Sbjct: 836 SKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLN 895

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A +L   +     VP++VTY+I+I G+   G +D+A   F  M+E  +VP+VITF  LI
Sbjct: 896 VAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLI 955

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               ++++  +  EL   M+E    P     ++++D+L +
Sbjct: 956 ESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGR 995



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 245/503 (48%), Gaps = 60/503 (11%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             P+  T+  +I  L    R  EA  LF  L+  G  PDVFTY TL++ L +       L
Sbjct: 423 LVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVL 482

Query: 79  NLFEEMANGNGEFGVVCEPNT-------------------------VTYTTIIDGLCKEG 113
            + +EM    GE  +  + N                          +TY T++      G
Sbjct: 483 AIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNG 542

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            VD+A +LL  MK     P VVTYT+++ G   A   +EA  L  EM  QG +P+VVT++
Sbjct: 543 HVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYS 602

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            +M    K  + +E+  L D M++ G   D  TY+ +++  C +  V+ A ++F  M+  
Sbjct: 603 SLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEE 662

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G +  + +Y  L++   K+++I+ AL +++E+    + PD  ++N +  GL + ++V+ A
Sbjct: 663 GMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA 722

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            KL D M+   +  D +TY + +DGL K+G + EA  +F  +     E D+ AY SL+D 
Sbjct: 723 CKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDV 782

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ------------------- 394
           L K G+L  AL +FR++     VP+VVTYS +I  L  +G+                   
Sbjct: 783 LGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPN 842

Query: 395 ----------------MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
                           +D+A +LF +M+     PN++T++ L+ G  +    +   +LL 
Sbjct: 843 VGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLE 902

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
           +M+++  +PD    +I++D + K
Sbjct: 903 EMEKVGCVPDLVTYNILIDGVGK 925



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 218/470 (46%), Gaps = 37/470 (7%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+T +IK L           + T +   G    +   T+L+     T++   AL +F +M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            +    FG  C P+T  Y  +++ L K GF   A  +  ++    I+P+  T+   +  F
Sbjct: 244 KS----FG--CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSF 297

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
             +   + A     EM+  G+ P V TF V++D L K+G +DEA +  + M      P+ 
Sbjct: 298 NRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNV 357

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY TL++G    GR+  A E+FV M+   C     +Y+ LI+G  K  E + A  L+ E
Sbjct: 358 VTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKE 417

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  +G+ P++  +N +   L +  +   A++LF +++  G   D +TY T ID L K G 
Sbjct: 418 MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQ 477

Query: 325 -------IVEAVE------------LFHTLRILKCEFDIR------------AYNSLIDG 353
                  I E VE              H   I   +  +              YN+L+  
Sbjct: 478 MDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSA 537

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
              +G ++ A++L   +     +P VVTY+ ++ GL   G++D+A  L  +ME+    P+
Sbjct: 538 FIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPS 597

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           V+T+  L+  F + ++  + + L  +M     + D S  S+V++ L K++
Sbjct: 598 VVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSD 647



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 154/315 (48%), Gaps = 1/315 (0%)

Query: 148 KDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           KD + AK  F     Q G    V T+ +++  L    + D   ++L  M + G R     
Sbjct: 160 KDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHL 219

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
             +LL  F  T  V+ A E+F  M+S GC  +   Y+ ++    K      A+ ++ ++ 
Sbjct: 220 LTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLG 279

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
              I+PD               +++ A +   EM ++G+     T+   ID L K+G I 
Sbjct: 280 QFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNID 339

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA + F+ ++ L+C  ++  Y +L++GL K+GRLE A E+F  +      P+ + Y+ +I
Sbjct: 340 EACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLI 399

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GL   G+ D A  LF +M++  +VPN+ T++++I    +     +  +L H +KE   +
Sbjct: 400 DGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV 459

Query: 447 PDASIVSIVVDLLAK 461
           PD    + ++D+L K
Sbjct: 460 PDVFTYNTLIDVLGK 474



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 40/84 (47%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            MG V        R+ +    PD +TFTSLI+ L    +++EA  LF  +   G  P V T
Sbjct: 926  MGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVT 985

Query: 61   YTTLVNGLCRTSHTIVALNLFEEM 84
            Y  L++ L R      A  +F EM
Sbjct: 986  YNVLIDILGRAGKVHEAAMIFHEM 1009


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 248/511 (48%), Gaps = 75/511 (14%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVF 59
           +GR+   F  +GR++ +      + F+ L+KGLC   R  +A  +   ++   GC+PD+F
Sbjct: 112 LGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLF 171

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +YT L+ GLC    +  AL+L   MA+  G     C  + V YTT+I+GL +EG +DKA 
Sbjct: 172 SYTILLKGLCDDKTSQQALDLLHIMADHKGR----CPLDVVAYTTVINGLLREGQLDKAY 227

Query: 120 ELLLQMKDKNIKPNVVTYTSVI-----------------------------------RGF 144
            L   M D+   P+VVTY+S+I                                    G+
Sbjct: 228 SLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGY 287

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C +    EA  +F +M   GV+P+VVT+  +MD LCKNGK  EA ++ D +++ G +PD+
Sbjct: 288 CSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDS 347

Query: 205 FTYNTLLDGFCLTG-----------------------------------RVNHAKELFVS 229
            TY TLL G+   G                                   +V+ A  +F +
Sbjct: 348 TTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSN 407

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G    + +Y  +++  C    ++ ALS ++ + S+G+ P++V+  TL  GL    +
Sbjct: 408 MRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDK 467

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            ++  +L  EM   G+  DT  +   +  LCK G ++EA  LF  +  +  E +   YN+
Sbjct: 468 WDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNT 527

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LIDG C  G+++ A++L   +    + P+ VTY+ +I G   +G+++    L  +M+   
Sbjct: 528 LIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKG 587

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           V P ++T++ML++G  +        EL  +M
Sbjct: 588 VNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 220/454 (48%), Gaps = 11/454 (2%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAE-SRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           F  + R   +   P+  T+  ++ G C    R+  A A   ++   G       ++ L+ 
Sbjct: 84  FNRMPRAGATSAAPNIATY-GIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLK 142

Query: 67  GLCRTSHTIVALNL-FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
           GLC    T  A+++    M     E G  C+P+  +YT ++ GLC +    +A +LL  M
Sbjct: 143 GLCDRRRTSDAMDIVLRRMP----ELG--CKPDLFSYTILLKGLCDDKTSQQALDLLHIM 196

Query: 126 KDKNIK-P-NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            D   + P +VV YT+VI G       ++A  LF  M+D+G  P+VVT++ I+  L K  
Sbjct: 197 ADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQ 256

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            MD+A+++   M+++GV PD   Y +L+ G+C +G+   A  +F  M   G +  V +Y+
Sbjct: 257 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYT 316

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            L++  CKN +   A  ++  ++ +G KPD   + TL  G      +     L D M + 
Sbjct: 317 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKK 376

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+      +   +    K+  + EA+ +F  +R      DI  Y +++D LC +GR++ A
Sbjct: 377 GMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDA 436

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L  F SL    L PN+V ++ +I GLC   + DK  +L  +M +  +  + I F+ ++  
Sbjct: 437 LSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGN 496

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +     +   L   M  I + P+ +  + ++D
Sbjct: 497 LCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLID 530



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 219/460 (47%), Gaps = 17/460 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAA--LFTKLRVFGC---EPDVFTYTTL 64
           V  R+LK     D  +   L + L   +R   A A  LF ++   G     P++ TY  +
Sbjct: 49  VFDRLLKR---GDRASIFDLNRALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIV 105

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           + G CR    +  L+L           G+   P  + ++ ++ GLC       A +++L+
Sbjct: 106 I-GCCRR---LGRLDLAFATVGRVITTGLRMSP--ILFSPLLKGLCDRRRTSDAMDIVLR 159

Query: 125 -MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQP-NVVTFNVIMDELCK 181
            M +   KP++ +YT +++G C  K   +A  L   M D +G  P +VV +  +++ L +
Sbjct: 160 RMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLR 219

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D+A  L D M+  G  PD  TY++++     T  ++ A ++F  M   G       
Sbjct: 220 EGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIM 279

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++GYC + + + A+ ++ +M   G++PDVV +  L   L +  +   A K+FD + 
Sbjct: 280 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 339

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G   D+ TY T + G    G +VE  +L   +     +     +N ++    K  +++
Sbjct: 340 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 399

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL +F ++    L P++V Y  ++  LC  G++D A   F  ++   + PN++ F  LI
Sbjct: 400 EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLI 459

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G    ++  KV EL  +M +  +  D    + ++  L K
Sbjct: 460 HGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCK 499



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 165/332 (49%), Gaps = 6/332 (1%)

Query: 153 AKRLFIEMMDQGV---QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
           A  LF  M   G     PN+ T+ +++    + G++D A   +  +I  G+R     ++ 
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139

Query: 210 LLDGFCLTGRVNHAKELFVS-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS- 267
           LL G C   R + A ++ +  M  +GCK  +FSY+IL+ G C +K  + AL L   M   
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 199

Query: 268 KGIKP-DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           KG  P DVV + T+  GL    Q+++A+ LFD M   G + D  TY + I  L K   + 
Sbjct: 200 KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMD 259

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A ++F  +       D   Y SL+ G C SG+ + A+ +F+ +    + P+VVTY+ ++
Sbjct: 260 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 319

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             LC +G+  +AR +F  + +    P+  T+  L+ G+       ++ +LL  M +  + 
Sbjct: 320 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQ 379

Query: 447 PDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
               I ++++   AK+     +L  F+   QQ
Sbjct: 380 LGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQ 411



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 6/241 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  ++      +++ EA  +F+ +R  G  PD+  Y T+++ LC       AL+ F  + 
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 444

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
           +          PN V +TT+I GLC     DK +EL  +M D+ I  + + + +++   C
Sbjct: 445 SEG------LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLC 498

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                 EAK LF  M+  G++PN  T+N ++D  C +GKMDEA +LL +M+ +GV+P   
Sbjct: 499 KKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDV 558

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYNT+++G+   GR+     L   M+  G    + +Y +L+ G  +      A  LY  M
Sbjct: 559 TYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618

Query: 266 L 266
           +
Sbjct: 619 I 619



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 9/293 (3%)

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT---VFSYS 243
           +A ++ D +++ G R   F  N  L           A  LF  M   G       + +Y 
Sbjct: 45  DAHQVFDRLLKRGDRASIFDLNRALSDVARASPAV-AISLFNRMPRAGATSAAPNIATYG 103

Query: 244 ILINGYCKN-KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL-FDEMQ 301
           I+I G C+    ++ A +    +++ G++   ++ + L  GL +  +   A  +    M 
Sbjct: 104 IVI-GCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMP 162

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK--CEFDIRAYNSLIDGLCKSGR 359
             G   D ++Y   + GLC +    +A++L H +   K  C  D+ AY ++I+GL + G+
Sbjct: 163 ELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQ 222

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A  LF ++      P+VVTYS +I  L     MDKA  +F  M +N V+P+ I +  
Sbjct: 223 LDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTS 282

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           L+ G+    +P + I +  KM    V PD    + ++D L KN  S  +   F
Sbjct: 283 LVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 335



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 41/230 (17%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V    +V   + +    PD V + +++  LC   R+ +A + F  L+  G  P++  +T
Sbjct: 397 KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFT 456

Query: 63  TLVNGLC-----------------------------------RTSHTIVALNLFEEMANG 87
           TL++GLC                                   +    I A NLF+ M   
Sbjct: 457 TLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR- 515

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                +  EPNT TY T+IDG C +G +D+A +LL  M    +KP+ VTY ++I G+   
Sbjct: 516 -----IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQN 570

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
               +   L  EM  +GV P +VT+ +++  L + G+   A  L   MI+
Sbjct: 571 GRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 240/461 (52%), Gaps = 6/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V  R+      PD  TFT  IK  C   R   A  L   +   GC+ +   Y
Sbjct: 125 GYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAY 184

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+V G    ++ + A  LF +M       G+   P+  T+  ++  LCK+G V +++ L
Sbjct: 185 CTVVAGFYEENYRVEAYELFNDML----RIGIF--PDVSTFNKLLHTLCKKGEVQESERL 238

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++  K +  N+ T+   I+G C     + A  +   ++ +G+ P+VVT+N ++  LCK
Sbjct: 239 LNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCK 298

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N  + EA + L  ++  G+ PD FTYNTL+DG+C  G + +A+++       G     F+
Sbjct: 299 NSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFT 358

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LING C+N EI+ AL+L++  L KG+KP V+++N L  GL +   + +A ++ +EM 
Sbjct: 359 YCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMS 418

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG ++D WTY   I+GLCK G + +A  L +         D+  +N+LIDG CK  ++E
Sbjct: 419 ENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKME 478

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             +++   +    + P+V+TY+ ++ GL    + +   + F  M E   VPN IT+++L 
Sbjct: 479 TTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILT 538

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               +  + ++ ++L+ ++    + PD    + ++   A N
Sbjct: 539 ESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANN 579



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 237/479 (49%), Gaps = 19/479 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S    +L  +++   TPD VT+ +LI GLC  S ++EA     KL   G EPD FTY
Sbjct: 265 GMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTY 324

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGLCKEGFVDKA 118
            TL++G C+      A  + +         G +C+   P+  TY ++I+GLC+   +D+A
Sbjct: 325 NTLIDGYCKMGMLQNAEKILQ---------GAICKGFVPDEFTYCSLINGLCQNDEIDRA 375

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             L      K +KP V+ Y  +I+G C      +A ++  EM + G   ++ T+N++++ 
Sbjct: 376 LALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVING 435

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK G + +A+ L++  I  G  PD FT+NTL+DG+C   ++    ++   M S G    
Sbjct: 436 LCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +Y+ ++NG  K  + E  +  +  M+ KG  P+ + +N L   L +  +V  A  L D
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVD 555

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKS 357
           E+   G+  DT ++ T I G   NG +  A +LF  +    K       YN +I+   + 
Sbjct: 556 EILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEK 615

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
             L +  +LF  +  G   P+  TY +MI G C  G  D      L+M E   +P++ TF
Sbjct: 616 LDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTF 675

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
             +I      +   + ++++H M    ++P+      VV+ +++ +  + + P   V +
Sbjct: 676 GRVINCLCVQHRVHEAVDIIHFMVHNGIVPE------VVNSISEADKKVVAAPKIVVED 728



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 221/438 (50%), Gaps = 7/438 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  TF  L+  LC +  + E+  L  K+   G   ++FT+   + GLCR      A+++
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSM 273

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + +            P+ VTY T+I GLCK   V +A++ L ++ +  ++P+  TY ++
Sbjct: 274 LDSVIREG------LTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTL 327

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C       A+++    + +G  P+  T+  +++ LC+N ++D A  L +  +  G+
Sbjct: 328 IDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGL 387

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P    YN L+ G C  G +  A ++   M   GC   +++Y+++ING CK   +  A +
Sbjct: 388 KPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANN 447

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L ++ ++KG  PDV   NTL  G  +  ++E   ++ ++M  +GV  D  TY + ++GL 
Sbjct: 448 LMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLS 507

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K     + +E F T+    C  +   YN L + LCK+G++  AL+L   +    + P+ V
Sbjct: 508 KAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTV 567

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +++ +I G  N+G +  A  LF  M E+  V     T++++I  F    +     +L  +
Sbjct: 568 SFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLE 627

Query: 440 MKEINVMPDASIVSIVVD 457
           M      PD     +++D
Sbjct: 628 MGAGGCAPDTYTYRVMID 645



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 182/383 (47%), Gaps = 11/383 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG + +   +L   +   F PD  T+ SLI GLC    I  A ALF      G +P V  
Sbjct: 334 MGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVIL 393

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC+    + AL +  EM+  NG     C  +  TY  +I+GLCK G V  A  
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSE-NG-----CSSDIWTYNLVINGLCKMGCVSDANN 447

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+     K   P+V T+ ++I G+C         ++  +M   GV P+V+T+N +++ L 
Sbjct: 448 LMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLS 507

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  K ++     + M++ G  P+  TYN L +  C  G+VN A +L   + + G      
Sbjct: 508 KAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTV 567

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           S++ +I+G+  N +++GA  L+  M  +  +      +N +     E   +    KLF E
Sbjct: 568 SFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLE 627

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKS 357
           M   G A DT+TYR  IDG C  G      +    L +++  F   +  +  +I+ LC  
Sbjct: 628 MGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFL--LEMIEKGFIPSLTTFGRVINCLCVQ 685

Query: 358 GRLEIALELFRSLPCGVLVPNVV 380
            R+  A+++   +    +VP VV
Sbjct: 686 HRVHEAVDIIHFMVHNGIVPEVV 708



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 186/360 (51%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y   +    ++G V +A ++  +M   N +P+V++Y +++     +  + +A ++F+ M 
Sbjct: 79  YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMK 138

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           + G+ P+V TF + +   C+  +   A RLL+ M+  G + +A  Y T++ GF       
Sbjct: 139 NVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRV 198

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A ELF  M  +G    V +++ L++  CK  E++ +  L +++L KG+  ++   N   
Sbjct: 199 EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFI 258

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL     +  A  + D + R G+  D  TY T I GLCKN  +VEA +  H L     E
Sbjct: 259 QGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE 318

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D   YN+LIDG CK G L+ A ++ +   C   VP+  TY  +I GLC + ++D+A  L
Sbjct: 319 PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALAL 378

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F       + P VI ++MLI+G  +     + ++++++M E     D    ++V++ L K
Sbjct: 379 FNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCK 438



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 125/271 (46%), Gaps = 12/271 (4%)

Query: 201 RPDAFTYNTLLDGFCLTGRVN-HAKELFVSMESMGCKHTVFSYSILING--------YCK 251
           R D F + +LL   C+  ++  H    FV+ME++  +  +   + L+ G        Y +
Sbjct: 32  REDGFKH-SLLTYKCIIQKLGFHGN--FVAMENVLAETRMDIDNSLLEGVYIGAMKSYGR 88

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
             +++ A+ ++  M     +P V+ +N +   L E    ++A K+F  M+  G+  D +T
Sbjct: 89  KGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYT 148

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           +   I   C+      A+ L + +    C+ +  AY +++ G  +      A ELF  + 
Sbjct: 149 FTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDML 208

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+V T++ ++  LC  G++ ++  L   + +  +  N+ TF++ I+G  R    S
Sbjct: 209 RIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLS 268

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             + +L  +    + PD    + ++  L KN
Sbjct: 269 GAMSMLDSVIREGLTPDVVTYNTLICGLCKN 299


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 254/504 (50%), Gaps = 44/504 (8%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V  G+ +L  + K        T+ +++KG+C+   +  A  +  ++   GC P+V  YTT
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+    + S    A+ + +EM     E G+   P+   Y ++I GL K   +D+A+  L+
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M +  +KPN  TY + I G+  A ++  A +   EM + GV PN V    +++E CK G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ EA      M+  G+  DA TY  L++G     +V+ A+E+F  M   G    VFSY 
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +LING+ K   ++ A S++ EM+ +G+ P+V+I+N L  G     ++E+A +L DEM   
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  +  TY T IDG CK+G + EA  LF  +++     D   Y +L+DG C+   +E A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 364 LELF---------RSLPCGVLV-----------------------------PNVVTYSIM 385
           + +F          + P   L+                             PN VTY+IM
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I  LC +G ++ A++LF  M+   ++P VIT+  L+ G+ ++   +++  +  +     +
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871

Query: 446 MPDASIVSIVVDLLAKNEISLNSL 469
            PD  + S++++   K  ++  +L
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKAL 895



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 225/468 (48%), Gaps = 29/468 (6%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             P   T+  LI GLC   R+ +A +L  ++   G   D  TY+ L++GL +  +   A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 79  NLFEEMANG-----------------------------NGEFGVVCEPNTVTYTTIIDGL 109
            L  EM +                              +G       P    Y ++I+G 
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           C+E  V +  ELL++MK +NI  +  TY +V++G C + D + A  +  EM+  G +PNV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           V +  ++    +N +  +A R+L  M + G+ PD F YN+L+ G     R++ A+   V 
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G K   F+Y   I+GY +  E   A     EM   G+ P+ V+   L     +  +
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V  A   +  M   G+  D  TY   ++GL KN  + +A E+F  +R      D+ +Y  
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+G  K G ++ A  +F  +    L PNV+ Y++++GG C  G+++KA++L  +M    
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + PN +T+  +I G+ +  + ++   L  +MK   ++PD+ + + +VD
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 185/414 (44%), Gaps = 51/414 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V  T LI   C + +++EA + +  +   G   D  TYT L+NGL +      A  +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM  G G       P+  +Y  +I+G  K G + KA  +  +M ++ + PNV+ Y  +
Sbjct: 615 FREM-RGKG-----IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GFC + +  +AK L  EM  +G+ PN VT+  I+D  CK+G + EA RL D M   G+
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT----------VF---------- 240
            PD+F Y TL+DG C    V  A  +F      GC  +          VF          
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTE 787

Query: 241 -------------------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
                              +Y+I+I+  CK   +E A  L+ +M +  + P V+ + +L 
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-- 339
            G  ++ +    F +FDE    G+  D   Y   I+   K G   +A+ L   +      
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 340 ---CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
              C+  I    +L+ G  K G +E+A ++  ++     +P+  T   +I   C
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 232/569 (40%), Gaps = 132/569 (23%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + D V F  L  G  A+  I EA  +F+        P +     L++ L R +     L+
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LD 203

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL----------------- 122
           LF ++  G  E  VV +  T  Y  +I   C+ G V   K++L                 
Sbjct: 204 LFWDVYKGMVERNVVFDVKT--YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261

Query: 123 LQMKD----KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           L++K+    K + P   TY  +I G C  K   +AK L +EM   GV  +  T+++++D 
Sbjct: 262 LKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG 321

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L K    D A  L+  M+ HG+    + Y+  +      G +  AK LF  M + G    
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381

Query: 239 VFSYSILINGYCKNK-----------------------------------EIEGALSLYS 263
             +Y+ LI GYC+ K                                   +++GA ++  
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK-- 321
           EM++ G +P+VVI+ TL     +  +   A ++  EM+  G+A D + Y + I GL K  
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501

Query: 322 -----NGYIVEAVE-----------LFHTLRILKCEF--------DIR------------ 345
                  ++VE VE            F +  I   EF        ++R            
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561

Query: 346 -----------------AYNSLID---------------GLCKSGRLEIALELFRSLPCG 373
                            AY S++D               GL K+ +++ A E+FR +   
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + P+V +Y ++I G    G M KA  +F +M E  + PNVI ++ML+ GF R  E  K 
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
            ELL +M    + P+A     ++D   K+
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKS 710



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 16/329 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +   +++   TP+ + +  L+ G C    I +A  L  ++ V G  P+  T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++G C++     A  LF+EM       G+V  P++  YTT++DG C+   V++A  
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLK----GLV--PDSFVYTTLVDGCCRLNDVERAIT 753

Query: 121 LLLQMKDKNIKPNVVTYTSVIRG-FCYAKDWNEAK---RLFIEMMDQGVQPNVVTFNVIM 176
           +    K K    +   + ++I   F + K   + +   RL     D+  +PN VT+N+++
Sbjct: 754 IFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D LCK G ++ A  L   M    + P   TY +LL+G+   GR      +F    + G +
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSK-----GIKPDVVIHNTLFVGLFEIHQVE 291
                YS++IN + K      AL L  +M +K     G K  +     L  G  ++ ++E
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            A K+ + M R     D+ T    I+  C
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 77/234 (32%)

Query: 291 ERAFKLFDEM-QRNGVAADTWT------------------YRTFIDGLCKNGYIVEAVEL 331
           E+A  + + M +RN   A+ W+                  +    DG    GYI EAV +
Sbjct: 114 EKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFV 173

Query: 332 FHTL-------RILKCE----------------------------FDIRAYNSLIDGLCK 356
           F +        R+ +C+                            FD++ Y+ LI   C+
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233

Query: 357 SGRLEI---------------------ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +G +++                     AL+L  S+ C  LVP   TY ++I GLC   ++
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM--KEINVMP 447
           + A+ L ++M+   V  +  T+ +LI G ++         L+H+M    IN+ P
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 159/484 (32%), Positives = 242/484 (50%), Gaps = 49/484 (10%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F  +AV  T+L+KGLC   R++EA   F  +    C PDV TYT LV+ LC+      A 
Sbjct: 40  FEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQ 98

Query: 79  NLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCK------------------EGFVDKAK 119
            +  EM A G       C P+TVT++T+IDGLCK                   G  D A 
Sbjct: 99  GMLREMIARG-------CAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 151

Query: 120 ELLLQ------------------MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           E ++Q                  +  K   P V+ +  VI GFC AKD + A +L   M+
Sbjct: 152 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 211

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           ++G  PNV TF +++  LCK  ++ EA +LL+ M+  G  P+  TY+T+++G C  G+V+
Sbjct: 212 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVD 271

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A ELF  ME   C   V +++ILI+G CK K IE A  LY  M   G  PD++ +N+L 
Sbjct: 272 DAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLI 331

Query: 282 VGLFEIHQVERAFKLFDEMQRNGV-AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
            GL +  QV+ AF+LF  +  +GV AA+  TY T   G    G + +A  +F  L     
Sbjct: 332 DGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGF 391

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D+  Y SLI   CK+ R    +EL   +      P V T S ++GGL      ++A  
Sbjct: 392 SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQ 451

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM---KEINVMPDASIVSIVVD 457
           LF  M       + + +++++ G  R ++ +K + +L ++   ++    P +S V  +V+
Sbjct: 452 LFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVE 511

Query: 458 LLAK 461
            L +
Sbjct: 512 SLCQ 515



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 232/478 (48%), Gaps = 45/478 (9%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VLG ++   FTP  + F  +I G C    +  A  L   +   GC P+VFT+T L+ GLC
Sbjct: 171 VLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLC 230

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           + +    A  L E+M  G       C PN VTY+T+I+GLCK+G VD A EL   M+ +N
Sbjct: 231 KANRVGEAQQLLEKMVTGG------CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 284

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PNVVT+  +I G C AK   EA++L+  M + G  P+++T+N ++D LCK+ ++DEA 
Sbjct: 285 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 344

Query: 190 RLLDLMIQHGVRP-DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           +L   + + GV   +A TY+TL  G+   GR+  A  +F  +   G    + +Y+ LI  
Sbjct: 345 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 404

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           YCK       + L  EM SKG  P V   + +  GLFE +  ERA +LFD M   G   D
Sbjct: 405 YCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDD 464

Query: 309 TWTYRTFIDG--------------------------------------LCKNGYIVEAVE 330
              Y   ++G                                      LC+ G   +A +
Sbjct: 465 ALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQ 524

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L H +        + +YN L+ GL +  R + A ++F ++      P + T +++I  LC
Sbjct: 525 LLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLC 584

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  ++D A +L   M +    P++ T + LI G+ +        +LL +M E  + P+
Sbjct: 585 SAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 642



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 141/438 (32%), Positives = 235/438 (53%), Gaps = 9/438 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+  LI+G  +   +  A  L  +++  G E +   +TTL+ GLC     + AL  
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  MA         C P+ +TYT ++  LCK G  D+A+ +L +M  +   P+ VT++++
Sbjct: 67  FRAMAKD-------CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC-KNGKMDEASRLLDLMIQHG 199
           I G C      +A R+  +++ +G+  +   F  I+  LC K   ++ AS++L ++I  G
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P    +N +++GFC    ++ A +L   M   GC   VF+++ILI G CK   +  A 
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  +M++ G  P+VV ++T+  GL +  QV+ A++LF  M+R     +  T+   IDGL
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGL 299

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP-CGVLVPN 378
           CK   I EA +L+H +R   C  DI  YNSLIDGLCKS +++ A +LF+++P  GV   N
Sbjct: 300 CKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 359

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VTYS +  G    G+M  A  +F  + +    P++ T+  LI  + + +   +V+EL+ 
Sbjct: 360 AVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVE 419

Query: 439 KMKEINVMPDASIVSIVV 456
           +M      P  + +S V+
Sbjct: 420 EMASKGFPPRVNTLSAVL 437



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 200/402 (49%), Gaps = 39/402 (9%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           +C PN  TY  +I G    G +D A +LL +MK    + N V +T++++G C A    EA
Sbjct: 4   ICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEA 63

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
              F   M +   P+V+T+  ++  LCK GK DEA  +L  MI  G  PD  T++TL+DG
Sbjct: 64  LEHF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDG 122

Query: 214 FCLTGRVNHAKEL--------------------------FVSME----------SMGCKH 237
            C  G    A  +                          + S+E          + G   
Sbjct: 123 LCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           TV  ++++ING+CK K+++ A  L   M+ KG  P+V     L  GL + ++V  A +L 
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 242

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           ++M   G + +  TY T I+GLCK G + +A ELF  +    C  ++  +N LIDGLCK+
Sbjct: 243 EKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKA 302

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV-VPNVIT 416
            R+E A +L+  +      P+++TY+ +I GLC   Q+D+A  LF  + E+ V   N +T
Sbjct: 303 KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVT 362

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVD 457
           +  L  G+  +   +    +   + +    PD A+  S++++
Sbjct: 363 YSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 404



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 158/332 (47%), Gaps = 2/332 (0%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           PN  TY  +IRGF  A D + A +L  EM   G + N V    +M  LC  G++ EA   
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
              M +    PD  TY  L+   C  G+ + A+ +   M + GC     ++S LI+G CK
Sbjct: 67  FRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF-EIHQVERAFKLFDEMQRNGVAADTW 310
               E A  +  +++ +G+        T+   L  + + VE A K+   +   G      
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            +   I+G CK   +  A +L   +    C  ++  +  LI GLCK+ R+  A +L   +
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
             G   PNVVTYS +I GLC  GQ+D A +LF  ME     PNV+T ++LI G  +    
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +  +L H+M+E    PD    + ++D L K+
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKS 337



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 19/288 (6%)

Query: 6   HGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG+  LGR+  +C          F+PD  T+TSLI   C  SR +E   L  ++   G  
Sbjct: 368 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 427

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P V T + ++ GL   +HT  A+ LF+ MA         C  + + Y  +++G+ +    
Sbjct: 428 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG------CTDDALIYNLVVEGMARASKH 481

Query: 116 DKAKELLLQM---KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           +KA  +L Q+   +D+   P+     +++   C     ++AK+L  +M ++G    V ++
Sbjct: 482 NKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSY 541

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++  L +  + DEA+++ + M+  G  P+  T N ++   C   +V+ A EL   M  
Sbjct: 542 NGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 601

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           +GC   + + + LI GYCK+   + A  L  EM   G++P+   H+ L
Sbjct: 602 LGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 154/379 (40%), Gaps = 68/379 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   + +   + +    P+ VT   LI GLC   RI EA  L+ ++R  GC PD+ TY
Sbjct: 268 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 327

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGN-------------------GEFGVVCE------ 96
            +L++GLC++     A  LF+ +                       G     C       
Sbjct: 328 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 387

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+  TYT++I   CK     +  EL+ +M  K   P V T ++V+ G        
Sbjct: 388 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 447

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMD---------------------------------- 177
            A +LF  M  +G   + + +N++++                                  
Sbjct: 448 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVD 507

Query: 178 ----ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
                LC+ G+ D+A +LL  M + G      +YN LL G     R + A ++F +M S 
Sbjct: 508 ALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSA 567

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G    + + +++I+  C   +++ A  L   M   G  PD+   NTL  G  +  + + A
Sbjct: 568 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLA 627

Query: 294 FKLFDEMQRNGVAADTWTY 312
            KL +EM   G+  +  T+
Sbjct: 628 RKLLEEMTEAGLEPNDTTH 646



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 113/264 (42%), Gaps = 37/264 (14%)

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C    F+Y ILI G+    +++ A+ L  EM S G + + V+H TL  GL +  +V  A 
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           + F  M ++  A D  TY   +  LCK G   EA  +   +    C  D   +++LIDGL
Sbjct: 65  EHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 355 CKSGRLEIALELFR-------------------------------SLPCGVLV-----PN 378
           CK G  E A  +                                 S   GV++     P 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V+ ++++I G C    +D A  L   M E   VPNV TF +LI G  + N   +  +LL 
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 439 KMKEINVMPDASIVSIVVDLLAKN 462
           KM      P+    S V++ L K 
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQ 267



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 6/137 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      +L ++ +  F     ++  L+ GL    R  EA  +F  +   G  P++ T
Sbjct: 516 VGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 575

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
              +++ LC  +    A  L + M+       + C P+  T  T+I G CK G  D A++
Sbjct: 576 VNVVISWLCSAAKVDDAYELVQRMSK------LGCCPDIETCNTLIGGYCKSGRADLARK 629

Query: 121 LLLQMKDKNIKPNVVTY 137
           LL +M +  ++PN  T+
Sbjct: 630 LLEEMTEAGLEPNDTTH 646


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 254/504 (50%), Gaps = 44/504 (8%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V  G+ +L  + K        T+ +++KG+C+   +  A  +  ++   GC P+V  YTT
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+    + S    A+ + +EM     E G+   P+   Y ++I GL K   +D+A+  L+
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M +  +KPN  TY + I G+  A ++  A +   EM + GV PN V    +++E CK G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ EA      M+  G+  DA TY  L++G     +V+ A+E+F  M   G    VFSY 
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +LING+ K   ++ A S++ EM+ +G+ P+V+I+N L  G     ++E+A +L DEM   
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  +  TY T IDG CK+G + EA  LF  +++     D   Y +L+DG C+   +E A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 364 LELF---------RSLPCGVLV-----------------------------PNVVTYSIM 385
           + +F          + P   L+                             PN VTY+IM
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I  LC +G ++ A++LF  M+   ++P VIT+  L+ G+ ++   +++  +  +     +
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871

Query: 446 MPDASIVSIVVDLLAKNEISLNSL 469
            PD  + S++++   K  ++  +L
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKAL 895



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 225/468 (48%), Gaps = 29/468 (6%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             P   T+  LI GLC   R+ +A +L  ++   G   D  TY+ L++GL +  +   A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 79  NLFEEMANG-----------------------------NGEFGVVCEPNTVTYTTIIDGL 109
            L  EM +                              +G       P    Y ++I+G 
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           C+E  V +  ELL++MK +NI  +  TY +V++G C + D + A  +  EM+  G +PNV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           V +  ++    +N +  +A R+L  M + G+ PD F YN+L+ G     R++ A+   V 
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G K   F+Y   I+GY +  E   A     EM   G+ P+ V+   L     +  +
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V  A   +  M   G+  D  TY   ++GL KN  + +A E+F  +R      D+ +Y  
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+G  K G ++ A  +F  +    L PNV+ Y++++GG C  G+++KA++L  +M    
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + PN +T+  +I G+ +  + ++   L  +MK   ++PD+ + + +VD
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 185/414 (44%), Gaps = 51/414 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V  T LI   C + +++EA + +  +   G   D  TYT L+NGL +      A  +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM  G G       P+  +Y  +I+G  K G + KA  +  +M ++ + PNV+ Y  +
Sbjct: 615 FREM-RGKG-----IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GFC + +  +AK L  EM  +G+ PN VT+  I+D  CK+G + EA RL D M   G+
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT----------VF---------- 240
            PD+F Y TL+DG C    V  A  +F      GC  +          VF          
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTE 787

Query: 241 -------------------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
                              +Y+I+I+  CK   +E A  L+ +M +  + P V+ + +L 
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-- 339
            G  ++ +    F +FDE    G+  D   Y   I+   K G   +A+ L   +      
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 340 ---CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
              C+  I    +L+ G  K G +E+A ++  ++     +P+  T   +I   C
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 232/569 (40%), Gaps = 132/569 (23%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + D V F  L  G  A+  I EA  +F+        P +     L++ L R +     L+
Sbjct: 148 SDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LD 203

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL----------------- 122
           LF ++  G  E  VV +  T  Y  +I   C+ G V   K++L                 
Sbjct: 204 LFWDVYKGMVERNVVFDVKT--YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261

Query: 123 LQMKD----KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           L++K+    K + P   TY  +I G C  K   +AK L +EM   GV  +  T+++++D 
Sbjct: 262 LKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG 321

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L K    D A  L+  M+ HG+    + Y+  +      G +  AK LF  M + G    
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381

Query: 239 VFSYSILINGYCKNK-----------------------------------EIEGALSLYS 263
             +Y+ LI GYC+ K                                   +++GA ++  
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK-- 321
           EM++ G +P+VVI+ TL     +  +   A ++  EM+  G+A D + Y + I GL K  
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501

Query: 322 -----NGYIVEAVE-----------LFHTLRILKCEF--------DIR------------ 345
                  ++VE VE            F +  I   EF        ++R            
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561

Query: 346 -----------------AYNSLID---------------GLCKSGRLEIALELFRSLPCG 373
                            AY S++D               GL K+ +++ A E+FR +   
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + P+V +Y ++I G    G M KA  +F +M E  + PNVI ++ML+ GF R  E  K 
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
            ELL +M    + P+A     ++D   K+
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKS 710



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 16/329 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +   +++   TP+ + +  L+ G C    I +A  L  ++ V G  P+  T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++G C++     A  LF+EM       G+V  P++  YTT++DG C+   V++A  
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLK----GLV--PDSFVYTTLVDGCCRLNDVERAIT 753

Query: 121 LLLQMKDKNIKPNVVTYTSVIRG-FCYAKDWNEAK---RLFIEMMDQGVQPNVVTFNVIM 176
           +    K K    +   + ++I   F + K   + +   RL     D+  +PN VT+N+++
Sbjct: 754 IFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D LCK G ++ A  L   M    + P   TY +LL+G+   GR      +F    + G +
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSK-----GIKPDVVIHNTLFVGLFEIHQVE 291
                YS++IN + K      AL L  +M +K     G K  +     L  G  ++ ++E
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            A K+ + M R     D+ T    I+  C
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/481 (32%), Positives = 239/481 (49%), Gaps = 34/481 (7%)

Query: 6   HGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HGF   GR+ ++C          + PD +T T +I GLC      +AA  F ++   GC+
Sbjct: 338 HGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCK 397

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           P+V TYTT++ GL +      A  + + M A+G       C P++VTY  ++DG CK G 
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG-------CFPDSVTYICLLDGFCKLGR 450

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA-------KDWNEAKRLFIEMMDQGVQP 167
           +D+A +LL ++   +  PN+  Y+S++ G C          D  E  +   E +D G+  
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCC 510

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT--GRVNHAKE 225
           +++        LCK G++DEA R+   M+  G +PDA TYN L++G C +   RV  A  
Sbjct: 511 SIIV------GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   +E +G      +Y+ L  G CK  E++ A+ +  E  S+G   DVV +  L  GL 
Sbjct: 565 LLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC 624

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              QV+RA  LF EM R G A D   Y   I+GL K   + +A + F  +     +  + 
Sbjct: 625 YQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVA 684

Query: 346 AYNSLIDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            Y +L+  LC +G ++ A   F S L  G LV +V+ Y  +I G C   ++D A  LF D
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFED 744

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M     VP  +T   L  G +R  +  K  ELL +M      P A+  + ++D L K++ 
Sbjct: 745 MISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDE 804

Query: 465 S 465
           S
Sbjct: 805 S 805



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 221/460 (48%), Gaps = 9/460 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     V G++ K  F PDA+ + ++I GL       EA  +   +    C P   TY 
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LVN LC+      A  LF  MA           PN+V YT++I G  K G + +A  L 
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASG------FRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +   +P+V+T+T +I G C + ++ +A + F EMM  G +PNVVT+  I+  L K 
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI 413

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++  A R++  MI HG  PD+ TY  LLDGFC  GR++ A +L   ++       +  Y
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473

Query: 243 SILINGYCKNKEIEGAL-SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           S L+NG C    +E  L  L+ +  +     D  +  ++ VGL +  +++ A ++F  M 
Sbjct: 474 SSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533

Query: 302 RNGVAADTWTYRTFIDGLCKN--GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
             G   D  TY   I+GLC++    +  A  L H L  +    D   Y  L  GLCK G 
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGE 593

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A+++           +VV Y+ +  GLC  GQ+D+A  LF +M      P+   +  
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +I G I++ +     +   +M      P  +  + +V  L
Sbjct: 654 IINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQAL 693



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 225/448 (50%), Gaps = 8/448 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           S  + +   +LK+   P+  +F  LI+      R  +A   F  ++   C+PD+ T+  L
Sbjct: 136 SQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLIL 195

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V+ LC+      A  +F EM       G V  P+   +T ++  L K   V +A+E+  Q
Sbjct: 196 VDCLCKAGMDEKAFEVFHEMM----AMGFV-PPDRALHTAMVRTLLKAKRVKEAREVFGQ 250

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M+     P+ + Y ++I G   A    EA ++   M+ +   P  VT+ ++++ LCK G 
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           ++ A  L  +M   G RP++  Y +L+ GF  +GR+  A  LF  M   G +  V ++++
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+G CK+   E A   + EM+  G KP+VV + T+  GL +I +V  AF++   M  +G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D+ TY   +DG CK G + EA +L   L       +++ Y+SL++GLC  G +E  L
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490

Query: 365 -ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            +LF          +      +I GLC  G++D+A  +F  M      P+  T+++LI G
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 424 FIRI--NEPSKVIELLHKMKEINVMPDA 449
             R   N   +   LLH ++++  +PDA
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDA 578



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 189/397 (47%), Gaps = 18/397 (4%)

Query: 1   MGRVSHGFVVL-GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +GRV++ F ++ G I   CF PD+VT+  L+ G C   R+ EAA L  +L      P++ 
Sbjct: 413 IGRVANAFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEF---GVVCEPNTVTYTTIIDGLCKEGFVD 116
            Y++LVNGLC        L+   E +    E    G+ C        +II GLCK G +D
Sbjct: 472 LYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCC--------SIIVGLCKTGRLD 523

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ---GVQPNVVTFN 173
           +A  +  +M  +  KP+  TY  +I G C +++ N  +R F  + D    G  P+ VT+ 
Sbjct: 524 EACRIFQRMVSEGCKPDATTYNILINGLCRSRE-NRVERAFALLHDLEKVGYLPDAVTYT 582

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            +   LCK G++D A ++L+     G   D   Y  L  G C  G+V+ A  LF  M   
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G      +Y  +ING  K K++E A   + EM+ KG KP V  +  L   L     V+ A
Sbjct: 643 GGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702

Query: 294 FKLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           F  F+ M  R  +      Y   I G CK   +  A++LF  +             SL D
Sbjct: 703 FHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFD 762

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           GL +SG+ E A EL + +  G   P+  T++ ++ GL
Sbjct: 763 GLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 149/299 (49%), Gaps = 1/299 (0%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G Q +V T+N +M+ L       +   + + M++ G+ P+ F++N L+  F  T R + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIHNTLFV 282
              F  M+   CK  + ++ IL++  CK    E A  ++ EM++ G + PD  +H  +  
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
            L +  +V+ A ++F +M++ G   D   Y T IDGL K G+  EA+++   +    C  
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
               Y  L++ LCK+G LE A ELFR +      PN V Y+ +I G    G+M +A  LF
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +M E    P+VIT  ++I G  +     +  +   +M      P+    + ++  L+K
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 129/263 (49%), Gaps = 7/263 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV   F +L  + K  + PDAVT+T L  GLC    +  A  +  +    G   DV  YT
Sbjct: 558 RVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYT 617

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L  GLC       A++LF+EM    G       P+   Y  II+GL K   ++ A +  
Sbjct: 618 ALCTGLCYQGQVDRAVSLFQEMVRQGG------APDAAAYCCIINGLIKVKKLEDACKFF 671

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCK 181
            +M  K  KP V TYT++++  C+A + +EA   F  M+ +G +  +V+ ++ ++   CK
Sbjct: 672 DEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCK 731

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+D A +L + MI  G  P A T  +L DG   +G+   A+EL   M + G      +
Sbjct: 732 ALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791

Query: 242 YSILINGYCKNKEIEGALSLYSE 264
           ++ +++G  K+ E    L L  E
Sbjct: 792 FTAILDGLRKSDESGKLLKLVQE 814



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 118/268 (44%), Gaps = 36/268 (13%)

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
           E  G +H VF+Y+ L+N     K      +++ EML  GI P+    N L        + 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL--------------- 335
           + A   F+ M+R     D  T+   +D LCK G   +A E+FH +               
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 336 -------------------RILKCEF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
                              ++ KC F  D  AYN++IDGL K+G  + AL++  ++    
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
            VP  VTY I++  LC  G +++A +LF  M  +   PN + +  LI GF +     +  
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
            L  +M E    PD    ++++D L K+
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKS 378


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/450 (32%), Positives = 230/450 (51%), Gaps = 9/450 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     ++GR++     PD VT+  LI GLC  S+  EA     KL   G EPD FTY
Sbjct: 265 GELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTY 324

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEF-GVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            TL+ G C+     +A  +       N  F G V  P+  TY ++IDGLC EG  ++A  
Sbjct: 325 NTLIAGYCKGGMVQLAERILV-----NAVFNGFV--PDEFTYRSLIDGLCHEGETNRALA 377

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +   K IKPNV+ Y ++I+G        EA +L  EM ++G+ P V TFN++++ LC
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLC 437

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + +A  L+ +MI  G  PD FT+N L+ G+    ++ +A E+   M   G    V+
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVY 497

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+NG CK  + E  +  Y  M+ KG  P++   N L   L   H++++A  L +EM
Sbjct: 498 TYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEM 557

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGR 359
           +   V  D  T+ T IDG CKNG +  A  LF  +  +         YN +I    +   
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLN 617

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           + +A +LF+ +    L P+  TY +M+ G C  G +D      L+M EN  +P++ T   
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGR 677

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           +I      +   +   ++H+M +  ++P+A
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/482 (32%), Positives = 249/482 (51%), Gaps = 13/482 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V  R+     TPD  +FT  +K  C  SR   A  L   +   GCE +V  Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAY 184

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T+V G    +       LF +M A+G      +C     T+  ++  LCK+G V + ++
Sbjct: 185 CTVVGGFYEENFKDEGYELFGKMLASGVS----LC---LSTFNKLLHVLCKKGDVKECEK 237

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL ++  + + PN+ TY   I+G C   + + A R+   ++DQG +P+VVT+N ++  LC
Sbjct: 238 LLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLC 297

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN K  EA   L  ++  G+ PD+FTYNTL+ G+C  G V  A+ + V+    G     F
Sbjct: 298 KNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEF 357

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI+G C   E   AL+L++E L KGIKP+V+++NTL  GL     +  A +L  EM
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF-DIRAYNSLIDGLCKSGR 359
              G+  +  T+   ++GLCK G + +A  L   + I K  F DI  +N LI G     +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM-ISKGYFPDIFTFNILIHGYSTQLK 476

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +E ALE+   +    + P+V TY+ ++ GLC   + +   + +  M E    PN+ TF++
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           L+    R ++  K + LL +MK  +V PDA     ++D   KN   L+   ++T+  + E
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG-DLDG--AYTLFRKME 593

Query: 480 EV 481
           EV
Sbjct: 594 EV 595



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 226/457 (49%), Gaps = 7/457 (1%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
            G+ + G++L S  +    TF  L+  LC +  + E   L  K+   G  P++FTY   +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
            GLC+      A+ +   + +         +P+ VTY  +I GLCK     +A+  L ++
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGP------KPDVVTYNYLIYGLCKNSKFQEAEVYLGKL 312

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
            ++ ++P+  TY ++I G+C       A+R+ +  +  G  P+  T+  ++D LC  G+ 
Sbjct: 313 VNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGET 372

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           + A  L +  +  G++P+   YNTL+ G    G +  A +L   M   G    V +++IL
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNIL 432

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           +NG CK   +  A  L   M+SKG  PD+   N L  G     ++E A ++ D M  NGV
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGV 492

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D +TY + ++GLCK     + +E + T+    C  ++  +N L++ LC+  +L+ AL 
Sbjct: 493 DPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALG 552

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP-NVITFDMLIRGF 424
           L   +    + P+ VT+  +I G C +G +D A  LF  MEE  +V  +  T++++I  F
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAF 612

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                 +   +L  +M +  + PD     ++VD   K
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 186/396 (46%), Gaps = 6/396 (1%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y   +    R      A+N+FE M   +      CEP   +Y  I+  L   G+ D+A +
Sbjct: 79  YVGAMKNYGRKGKVQEAVNVFERMDFYD------CEPTVFSYNAIMSILVDSGYFDQAHK 132

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           + ++M+D+ I P+V ++T  ++ FC     + A RL   M  QG + NVV +  ++    
Sbjct: 133 VYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +    DE   L   M+  GV     T+N LL   C  G V   ++L   +   G    +F
Sbjct: 193 EENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLF 252

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+  I G C+  E++ A+ +   ++ +G KPDVV +N L  GL +  + + A     ++
Sbjct: 253 TYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKL 312

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D++TY T I G CK G +  A  +           D   Y SLIDGLC  G  
Sbjct: 313 VNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGET 372

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL LF       + PNV+ Y+ +I GL N G + +A  L  +M E  ++P V TF++L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNIL 432

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           + G  ++   S    L+  M      PD    +I++
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 185/394 (46%), Gaps = 8/394 (2%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV- 135
           AL +F  M   +G      +    TY +II+ L   G  +  +E+L+ M+ +N+  +++ 
Sbjct: 23  ALEMFNSMRKEDG-----FKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMR-QNVGNHMLE 76

Query: 136 -TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
             Y   ++ +       EA  +F  M     +P V ++N IM  L  +G  D+A ++   
Sbjct: 77  GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMR 136

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   G+ PD +++   +  FC T R + A  L  +M S GC+  V +Y  ++ G+ +   
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            +    L+ +ML+ G+   +   N L   L +   V+   KL D++ + GV  + +TY  
Sbjct: 197 KDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNF 256

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
           FI GLC+ G +  AV +   L     + D+  YN LI GLCK+ + + A      L    
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEG 316

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           L P+  TY+ +I G C  G +  A  + ++   N  VP+  T+  LI G     E ++ +
Sbjct: 317 LEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRAL 376

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
            L ++     + P+  + + ++  L+   + L +
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGLILEA 410



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 144/282 (51%), Gaps = 9/282 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG VS    ++  ++   + PD  TF  LI G   + ++  A  +   +   G +PDV+T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYT 498

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+NGLC+TS     +  ++ M          C PN  T+  +++ LC+   +DKA  
Sbjct: 499 YNSLLNGLCKTSKYEDVMETYKTMVEKG------CAPNLFTFNILLESLCRYHKLDKALG 552

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDEL 179
           LL +MK+K++ P+ VT+ ++I GFC   D + A  LF +M +   V  +  T+N+I+   
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAF 612

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            +   +  A +L   M+   + PD +TY  ++DGFC TG V+   +  + M   G   ++
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSL 672

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            +   +IN  C    +  A  +   M+ KG+ P+ V  NT+F
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTIF 712



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 44/246 (17%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++ +   +L  ++ +   PD  T+ SL+ GLC  S+  +    +  +   GC P++FT+ 
Sbjct: 476 KMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFN 535

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA---- 118
            L+  LCR      AL L EEM N +        P+ VT+ T+IDG CK G +D A    
Sbjct: 536 ILLESLCRYHKLDKALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLF 589

Query: 119 --------------------------------KELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                                           ++L  +M D+ + P+  TY  ++ GFC 
Sbjct: 590 RKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
             + +   +  +EMM+ G  P++ T   +++ LC   ++ EA+ ++  M+Q G+ P+A  
Sbjct: 650 TGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV- 708

Query: 207 YNTLLD 212
            NT+ D
Sbjct: 709 -NTIFD 713


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 242/466 (51%), Gaps = 12/466 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   + +L  +      P       +I+GLC   R  +A   F  +    C PD+ T+
Sbjct: 44  GKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITF 103

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+ L ++     A  +FE M   +      C PN VTYTT+I+GLCK+G +D+A EL
Sbjct: 104 NILVDALVKSGRVEEAFQIFESMHTSSQ-----CLPNVVTYTTVINGLCKDGKLDRAIEL 158

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +    PNV+TY+ ++ G C A   ++   L  EM  +G QP+V+ +N +++ LCK
Sbjct: 159 LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCK 218

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + ++DEA  L+ LMI+ G  P   TYN+L++ FC + +V+ A  L   M   GC   V +
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL----- 296
           Y+ +I G C++  ++ A +L  +M++    PDV+ ++T+  GL +  +V+  +KL     
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338

Query: 297 -FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
             + M++ G   +  TY   I+GLC+     +A+ L   +   +   D+ +++ +I  LC
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS  L+ A ++F  +      PN V Y+ +I GL   G++DKA  +F  M E +  P V 
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVA 457

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           T++ ++ G   +    + + ++  M      PD +    ++  L +
Sbjct: 458 TYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 231/446 (51%), Gaps = 14/446 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+ SLI GLC   ++ +A  L  ++R  G  P V  +  ++ GLC+      AL  
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK-DKNIKPNVVTYTS 139
           F+ +A      G  C P+ +T+  ++D L K G V++A ++   M       PNVVTYT+
Sbjct: 88  FKTVA------GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           VI G C     + A  L   M + G  PNV+T++V+++ LCK G+ D+   LL  M + G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +PD   YNTLL+G C + R++ A EL   M   GC  TV +Y+ L+  +C++K+++ A 
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L   M  +G  PDV+ +NT+  GL    +++ A  L  +M       D  TY T IDGL
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 320 CKNGYI------VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           CK+  +        A E+   ++   C  +   Y  +I+GLC++ + + AL L R +   
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            +VP++ ++S++IG LC    +D A  +F  M E    PN + +  LI G  +  E  K 
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441

Query: 434 IELLHKMKEINVMPDASIVSIVVDLL 459
           + +   M E +  P  +  + V+D L
Sbjct: 442 VRVFELMVE-SFRPGVATYNSVLDGL 466



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 216/405 (53%), Gaps = 16/405 (3%)

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           +N L R      A+ LF E           C PN  TY ++I GLCK G +D+A ELL +
Sbjct: 5   LNLLVRAGQHGQAVQLFREER---------CVPNEFTYGSLIHGLCKAGKLDQAYELLDE 55

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M+D+ I P V  +  VIRG C A  + +A   F  +      P+++TFN+++D L K+G+
Sbjct: 56  MRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115

Query: 185 MDEASRLLDLM-IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++EA ++ + M       P+  TY T+++G C  G+++ A EL   M   GC   V +YS
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +L+ G CK    +   +L  EM  +G +PDV+++NTL  GL +  +++ A +L   M R+
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G      TY + ++  C++  +  A  L   +    C  D+  YN++I GLC+  RL+ A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD------KARDLFLDMEENAVVPNVITF 417
             L + +     VP+V+TYS +I GLC D ++D       A ++   M++    PN  T+
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            ++I G  R  +  + + LL +M +  V+PD S  S+V+  L K+
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400



 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 228/449 (50%), Gaps = 16/449 (3%)

Query: 2   GRVSHGFVVLGRILKS--CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           GRV   F +   +  S  C  P+ VT+T++I GLC + ++  A  L   +   GC P+V 
Sbjct: 114 GRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY+ LV GLC+   T     L +EM     +      P+ + Y T+++GLCK   +D+A 
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ------PDVIMYNTLLNGLCKSRRLDEAL 226

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           EL+  M      P VVTY S++  FC +K  + A RL   M ++G  P+V+ +N ++  L
Sbjct: 227 ELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGL 286

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH------AKELFVSMESM 233
           C++ ++D+A  LL  M+     PD  TY+T++DG C   RV+       A E+   M+  
Sbjct: 287 CRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GC     +Y+++I G C+ ++ + AL+L   M+   + PD+   + +   L + H ++ A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
           +K+F  M       +   Y   IDGL K G + +AV +F  L +      +  YNS++DG
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDG 465

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LC  GR+E A+ +   +      P+  +Y  +I GLC    +++A +LF  +E       
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKE 442
           V  +++L+    +    S    + +K+ E
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 148/276 (53%), Gaps = 13/276 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRI-----MEAAA-LFTKLRVFGCE 55
            R+     +L +++ +   PD +T++++I GLC + R+     +EAA  +   ++  GC 
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP 349

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+  TY  ++ GLCR   +  AL L   M +      VV  P+  +++ +I  LCK   +
Sbjct: 350 PNAGTYAVVIEGLCRARKSQQALALLRRMIDSE----VV--PDLSSFSMVIGSLCKSHDL 403

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A ++   M ++  KPN V Y ++I G     + ++A R+F E+M +  +P V T+N +
Sbjct: 404 DAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSV 462

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D LC  G+++EA R+++ MI     PD  +Y  L+ G C    V  A ELF ++E+ G 
Sbjct: 463 LDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGF 522

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
              V  Y++L+N  CK K +  A  + ++++  G K
Sbjct: 523 AMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 126/257 (49%), Gaps = 4/257 (1%)

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N  L+     G+   A +LF       C    F+Y  LI+G CK  +++ A  L  EM  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +GI P V +HN +  GL +  +   A   F  +       D  T+   +D L K+G + E
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 328 AVELFHTLRIL-KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           A ++F ++    +C  ++  Y ++I+GLCK G+L+ A+EL   +      PNV+TYS+++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC  G+ DK   L  +M      P+VI ++ L+ G  +     + +EL+  M      
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 447 PDASIVSIVVDLLAKNE 463
           P     + +++L  +++
Sbjct: 239 PTVVTYNSLMELFCRSK 255



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 1   MGRVSHGF-VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +GR+     +V G I K CF PD  ++ +LI+GLC  S + EA  LF  +   G   +V 
Sbjct: 469 VGRIEEAVRMVEGMIHKECF-PDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527

Query: 60  TYTTLVNGLCR 70
            Y  LVN LC+
Sbjct: 528 VYNVLVNELCK 538


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/421 (33%), Positives = 227/421 (53%), Gaps = 6/421 (1%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           SL+ GL     +  A  +  ++   G E +V+T   +VN LC+        +   EM  G
Sbjct: 88  SLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEM-EG 146

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
           NG +      + VTY T+I   C+EG +++A E++  M DK +KP++ TY ++I G C  
Sbjct: 147 NGIYA-----DMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKK 201

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
             +  AK + IEM++ G+ P+  T+N ++ E C+     EA  +   M++ GV PD  ++
Sbjct: 202 GRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSF 261

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           ++L+  F     ++ A   F  M+  G       Y++L++GYC+N  +  AL +  EML 
Sbjct: 262 SSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE 321

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G   DV+ +NT+  GL +   +  A KLFDEM   G   D +T+ T I G C++G + +
Sbjct: 322 QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTK 381

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A+ LF T+     + DI AYN+LIDG CK G +E A EL+  +    + PN +TY I+I 
Sbjct: 382 ALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 441

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
             C+ G + +A  L+  M E  + P ++T + +I+G+ R  + SK  E L +M    V P
Sbjct: 442 AYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 501

Query: 448 D 448
           D
Sbjct: 502 D 502



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 229/437 (52%), Gaps = 6/437 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            D VT+ +LI   C E  + EA  +   +   G +P +FTY  ++NGLC+      A  +
Sbjct: 151 ADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGI 210

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM N      +   P+T TY T++   C+     +AKE+  +M  + + P++V+++S+
Sbjct: 211 LIEMLN------IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSL 264

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I  F   +  ++A   F +M   G+ P+ V + V+M   C+NG M EA ++ D M++ G 
Sbjct: 265 IAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGC 324

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D   YNT+L+G C    +  A +LF  M   G     ++++ LI+G+C++  +  ALS
Sbjct: 325 VLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALS 384

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+  M  + IKPD+V +NTL  G  ++ ++E+A +L+D M    +  +  TY   I+  C
Sbjct: 385 LFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYC 444

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G++ EA  L+  +     +  +   N++I G C+SG    A E    +    + P+ +
Sbjct: 445 SVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI 504

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y+ +I G   +  MDKA      ME+  ++P++IT+++++ GF R     +   +L KM
Sbjct: 505 SYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564

Query: 441 KEINVMPDASIVSIVVD 457
            E  + PD S  + +++
Sbjct: 565 IEKGINPDRSTYTALIN 581



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 220/447 (49%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++  +      P   T+ ++I GLC + R   A  +  ++   G  PD  TY
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+   CR  +   A  +F EM       GVV  P+ V+++++I    +   +D+A   
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQ----GVV--PDLVSFSSLIAVFSRNRHLDQALVY 280

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              MK   + P+ V YT ++ G+C   +  EA ++  EM++QG   +V+ +N I++ LCK
Sbjct: 281 FRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCK 340

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + +A +L D M++ G  PD +T+ TL+ G C  G +  A  LF +M     K  + +
Sbjct: 341 EKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVA 400

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+CK  E+E A  L+  M+S+ I P+ + +  L      +  V  AF+L+D M 
Sbjct: 401 YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMI 460

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+     T  T I G C++G   +A E    +       D  +YN+LI+G  +   ++
Sbjct: 461 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMD 520

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A      +    L+P+++TY++++ G C  G+M +A  +   M E  + P+  T+  LI
Sbjct: 521 KAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G +  +  ++      +M +    PD
Sbjct: 581 NGHVTQDNLNEAFRFHDEMLQRGFAPD 607



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 208/431 (48%), Gaps = 7/431 (1%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           +C T + V F  LI+      ++ E    F  LR  G    +    +L+ GL +     +
Sbjct: 43  NCGTNNLV-FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVEL 101

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A  +  E+           E N  T   +++ LCK+G  D  K  L +M+   I  ++VT
Sbjct: 102 AWEVHREVVRSG------IELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVT 155

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y ++I  +C      EA  +   M D+G++P++ T+N I++ LCK G+   A  +L  M+
Sbjct: 156 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 215

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+ PD  TYNTLL   C     + AKE+F  M   G    + S+S LI  + +N+ ++
Sbjct: 216 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLD 275

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL  + +M   G+ PD VI+  L  G      +  A K+ DEM   G   D   Y T +
Sbjct: 276 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 335

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GLCK   + +A +LF  +       D   + +LI G C+ G +  AL LF ++    + 
Sbjct: 336 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 395

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P++V Y+ +I G C  G+M+KA +L+  M    + PN IT+ +LI  +  +   S+   L
Sbjct: 396 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 455

Query: 437 LHKMKEINVMP 447
              M E  + P
Sbjct: 456 WDVMIEKGIKP 466



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 186/354 (52%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           +++ GL K  +V+ A E+  ++    I+ NV T   ++   C    +++ K    EM   
Sbjct: 88  SLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGN 147

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G+  ++VT+N ++   C+ G ++EA  +++ M   G++P  FTYN +++G C  GR   A
Sbjct: 148 GIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARA 207

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           K + + M ++G      +Y+ L+   C+      A  ++ EML +G+ PD+V  ++L   
Sbjct: 208 KGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAV 267

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                 +++A   F +M++ G+  D   Y   + G C+NG ++EA+++   +    C  D
Sbjct: 268 FSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 327

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           + AYN++++GLCK   L  A +LF  +     +P+  T++ +I G C DG M KA  LF 
Sbjct: 328 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 387

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            M +  + P+++ ++ LI GF ++ E  K  EL   M    + P+     I+++
Sbjct: 388 TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 441



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 140/289 (48%), Gaps = 41/289 (14%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D + + +++ GLC E  + +A  LF ++   G  PD +T+TTL++G C+  +   AL+LF
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M   N       +P+ V Y T+IDG CK G ++KA EL   M  + I PN +TY  +I
Sbjct: 387 GTMTQRN------IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILI 440

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
             +C     +EA RL+  M+++G++P +VT N ++   C++G   +A   L  MI  GV 
Sbjct: 441 NAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVA 500

Query: 202 PDAFTYNTL-----------------------------------LDGFCLTGRVNHAKEL 226
           PD  +YNTL                                   ++GFC  GR+  A+ +
Sbjct: 501 PDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELV 560

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
              M   G      +Y+ LING+     +  A   + EML +G  PD V
Sbjct: 561 LRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 153/320 (47%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N   N + +  +IR +  A+   E    F  +  +G   ++   N ++  L K   ++ A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             +   +++ G+  + +T N +++  C  G+ +  K     ME  G    + +Y+ LI  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           YC+   +E A  + + M  KG+KP +  +N +  GL +  +  RA  +  EM   G++ D
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T TY T +   C+     EA E+F  +       D+ +++SLI    ++  L+ AL  FR
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    LVP+ V Y++++ G C +G M +A  +  +M E   V +VI ++ ++ G  +  
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 342

Query: 429 EPSKVIELLHKMKEINVMPD 448
             +   +L  +M E   +PD
Sbjct: 343 MLTDADKLFDEMVERGALPD 362



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 140/297 (47%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N + F++++    +  K+ E +    ++   G        N+LL G      V  A E+ 
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             +   G +  V++ +I++N  CK+ + +   S  SEM   GI  D+V +NTL       
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             +E AF++ + M   G+    +TY   I+GLCK G    A  +   +  +    D   Y
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+L+   C+      A E+F  +    +VP++V++S +I     +  +D+A   F DM++
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             +VP+ + + +L+ G+ R     + +++  +M E   + D    + +++ L K ++
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 343



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 149/326 (45%), Gaps = 17/326 (5%)

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           F  ++  ++A+ L + M+ +     V     ++  +C N   +    + DL+I+  V+  
Sbjct: 5   FVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNL--VFDLLIRTYVQAR 62

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
                          ++    E F  + S G   ++ + + L+ G  K   +E A  ++ 
Sbjct: 63  ---------------KLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHR 107

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           E++  GI+ +V   N +   L +  + +       EM+ NG+ AD  TY T I   C+ G
Sbjct: 108 EVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREG 167

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + EA E+ +++     +  +  YN++I+GLCK GR   A  +   +    L P+  TY+
Sbjct: 168 LLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYN 227

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            ++   C      +A+++F +M    VVP++++F  LI  F R     + +     MK+ 
Sbjct: 228 TLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKF 287

Query: 444 NVMPDASIVSIVVDLLAKNEISLNSL 469
            ++PD  I ++++    +N   L +L
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEAL 313



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 6/170 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G VS  F +   +++    P  VT  ++IKG C      +A     ++   G  PD  +
Sbjct: 446 VGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHIS 505

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG  R  +   A     +M     + G++  P+ +TY  +++G C++G + +A+ 
Sbjct: 506 YNTLINGFVREDNMDKAFLWINKME----KEGLL--PDIITYNVVMNGFCRQGRMQEAEL 559

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           +L +M +K I P+  TYT++I G     + NEA R   EM+ +G  P+ V
Sbjct: 560 VLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/459 (32%), Positives = 233/459 (50%), Gaps = 26/459 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+ ++I   C   RI EA  L   + + G EP++ TY  ++NGLCR         +
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGV 295

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM            P+ VTY T+++G CK G   +A  L  +M    + P+VVTYTS+
Sbjct: 296 LAEMDRKG------FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSL 349

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C A + N A   F +M  +G++PN VT+  +++   + G MDEA R+ D MI+ G 
Sbjct: 350 INTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGF 409

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P   TYN LL+G C++GR+  A  L   ME  G    V SYS +I G+C+ +E++ A  
Sbjct: 410 PPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQ 469

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + +EM+ KG+ PD + +++L  GL E  ++  A  LF EM    +  D +TY + I+G C
Sbjct: 470 MNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYC 529

Query: 321 KNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           K G + EA+ L     ++K  F  D   YN LI+GL K  R   A  L   L     +PN
Sbjct: 530 KEGDLNEALNLHD--EMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPN 587

Query: 379 VVTYSIMI---------------GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            +TY  +I                G C  G M++A  +F  M +    PN   ++++I G
Sbjct: 588 GITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHG 647

Query: 424 FIRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDLLAK 461
             R     K  +L  +M +   +P   +I+++V  L ++
Sbjct: 648 HCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSE 686



 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 244/468 (52%), Gaps = 33/468 (7%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   ++ S  + +  ++  LI+G CA   +      F ++    C P+V TY T++   C
Sbjct: 190 VYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYC 249

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  L   M    G  G+  EPN +TY  +I+GLC+ G +++   +L +M  K 
Sbjct: 250 KLKRIDEAFKLLRSM----GLEGL--EPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG 303

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+ VTY +++ G+C   ++++A  L  EM+  G+ P+VVT+  +++ +CK G ++ A 
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAM 363

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
              D M   G+RP+  TY +L++GF   G ++ A  ++  M   G   T+ +Y+ L+NG+
Sbjct: 364 EFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGH 423

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C +  +E A+ L   M  KG+ PDVV ++T+  G     +++RAF++  EM   GV+ D 
Sbjct: 424 CVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDA 483

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTL---RILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            TY + I GLC+   + EA +LF  +    +L  EF    Y SLI+G CK G L  AL L
Sbjct: 484 ITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEF---TYTSLINGYCKEGDLNEALNL 540

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD-------- 418
              +     +P+ VTY+++I GL    +  +A+ L L +  +  +PN IT+D        
Sbjct: 541 HDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSD 600

Query: 419 -------MLIRGFIR---INEPSKVIELLHKMKEINVMPDASIVSIVV 456
                   LI+GF     +NE  +V E    M + N  P+ ++ ++++
Sbjct: 601 IEFKSVVALIKGFCMKGLMNEADQVFE---SMIKRNQKPNEAVYNVII 645



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 222/439 (50%), Gaps = 21/439 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+   F +L  +      P+ +T+  +I GLC   RI E + +  ++   G  PD  T
Sbjct: 251 LKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVT 310

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TLVNG C+  +   AL L  EM   NG       P+ VTYT++I+ +CK G +++A E
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLR-NG-----LPPDVVTYTSLINTMCKAGNLNRAME 364

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              QM  + ++PN VTYTS+I GF      +EA R++ EM+  G  P +VT+N +++  C
Sbjct: 365 FFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHC 424

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G+M+EA  LL  M   G+ PD  +Y+T++ GFC    ++ A ++   M   G      
Sbjct: 425 VSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAI 484

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS LI G C+ + +  A  L+ EML+K + PD   + +L  G  +   +  A  L DEM
Sbjct: 485 TYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEM 544

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVEL---------------FHTLRILKCEFDIR 345
            + G   DT TY   I+GL K     EA  L               + TL     + + +
Sbjct: 545 IKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFK 604

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           +  +LI G C  G +  A ++F S+      PN   Y+++I G C DG + KA  L+ +M
Sbjct: 605 SVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEM 664

Query: 406 EENAVVPNVITFDMLIRGF 424
            +   +P+ +T   L++  
Sbjct: 665 VDFGFIPHTVTIIALVKAL 683



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 236/446 (52%), Gaps = 10/446 (2%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV- 76
           C +  AV F  ++K     + I +A  +    ++ G  P V +Y  +++ + R    ++ 
Sbjct: 128 CNSSSAV-FDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIF 186

Query: 77  ALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           A  ++ EM A+G          N  +Y  +I G C  G ++       +M+     PNVV
Sbjct: 187 AEKVYREMIASG-------VSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVV 239

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY +VI  +C  K  +EA +L   M  +G++PN++T+N++++ LC+ G+++E S +L  M
Sbjct: 240 TYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEM 299

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            + G  PD  TYNTL++G+C  G  + A  L   M   G    V +Y+ LIN  CK   +
Sbjct: 300 DRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNL 359

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A+  + +M  +G++P+ V + +L  G  +   ++ A++++DEM R+G      TY   
Sbjct: 360 NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNAL 419

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           ++G C +G + EA+ L   +       D+ +Y+++I G C+   L+ A ++   +    +
Sbjct: 420 LNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV 479

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+ +TYS +I GLC   ++++A DLF +M   +++P+  T+  LI G+ +  + ++ + 
Sbjct: 480 SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALN 539

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAK 461
           L  +M +   +PD    +++++ L K
Sbjct: 540 LHDEMIKKGFLPDTVTYNVLINGLNK 565



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 188/391 (48%), Gaps = 36/391 (9%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV------------- 140
           +C  ++  +  ++       F++KA  ++   K     P V++Y ++             
Sbjct: 127 MCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIF 186

Query: 141 -----------------------IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
                                  IRGFC A +     R F EM      PNVVT+N ++ 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
             CK  ++DEA +LL  M   G+ P+  TYN +++G C  GR+     +   M+  G   
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              +Y+ L+NGYCK      AL L+SEML  G+ PDVV + +L   + +   + RA + F
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           D+M   G+  +  TY + I+G  + G++ EA  ++  +        I  YN+L++G C S
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GR+E A+ L R +    L P+VV+YS +I G C   ++D+A  +  +M E  V P+ IT+
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             LI+G       ++  +L  +M   +++PD
Sbjct: 487 SSLIQGLCEQRRLNEACDLFQEMLNKSLLPD 517


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/412 (35%), Positives = 223/412 (54%), Gaps = 11/412 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F   A++   ++  L  E RI    +++ ++       +V T+  ++NGLC+      A 
Sbjct: 190 FRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAG 249

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++ E+M      +G    P+ +TY TIIDG CK G + KA  LL +M  K I PN +T+ 
Sbjct: 250 DVVEDMK----AWGF--SPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFN 303

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I GFC  ++   AK++F EM  QG+QPNVVT+N +++ LC NGK+DEA  L D M   
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G++P+  TYN L++GFC    +  A+E+   +   G    V +++ LI+ Y K   ++ A
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L S ML  G+ P+V  +N L VG      V+ A KL  EM+ NG+ AD  TY   +D 
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G   +AV L   +  +        YN+LIDG  + G    AL +   +       N
Sbjct: 484 LCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRAN 543

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD-----MLIRGFI 425
           +VTY+++I G CN G++++A  L  +M E  ++PN  T+D     M+ +GFI
Sbjct: 544 IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 198/360 (55%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N VT+  +I+GLCK G   KA +++  MK     P+V+TY ++I G+C A    +A  L 
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM+ + + PN +TFN+++D  C++  +  A ++ + M + G++P+  TYN+L++G C  
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G+++ A  L   M  MG K  V +Y+ LING+CK K ++ A  +  ++  +G+ P+V+  
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           NTL     +  +++ AF L   M   GV  +  TY   I G C+ G + EA +L   +  
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              + D+  YN L+D LCK G    A+ L   +    L P+ +TY+ +I G   +G    
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTA 527

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A ++   ME+     N++T+++LI+GF    +  +   LL++M E  ++P+ +   I+ D
Sbjct: 528 ALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 587



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 194/384 (50%), Gaps = 6/384 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     V   +++     + VTF  +I GLC   +  +A  +   ++ +G  P V TY
Sbjct: 208 GRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITY 267

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G C+      A  L +EM            PN +T+  +IDG C++  V  AK++
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMV------AKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ + ++PNVVTY S+I G C     +EA  L  +M   G++PNVVT+N +++  CK
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + EA  +LD + + G+ P+  T+NTL+D +   GR++ A  L   M   G    V +
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G+C+   ++ A  L  EM   G+K D+V +N L   L +  +  +A +L DEM 
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMF 501

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+     TY   IDG  + G    A+ +   +       +I  YN LI G C  G+LE
Sbjct: 502 EVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLE 561

Query: 362 IALELFRSLPCGVLVPNVVTYSIM 385
            A  L   +    L+PN  TY I+
Sbjct: 562 EANRLLNEMLEKGLIPNRTTYDIL 585



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 171/324 (52%), Gaps = 6/324 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  ++     P+ +TF  LI G C +  +  A  +F +++  G +P+V TY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC       AL L ++M+      G+  +PN VTY  +I+G CK+  + +A+E+
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMS------GMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  +  + + PNV+T+ ++I  +  A   ++A  L   M+D GV PNV T+N ++   C+
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + EA +L   M  +G++ D  TYN L+D  C  G    A  L   M  +G   +  +
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLT 511

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GY +      AL++ + M  KG + ++V +N L  G     ++E A +L +EM 
Sbjct: 512 YNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 571

Query: 302 RNGVAADTWTYRTFIDGLCKNGYI 325
             G+  +  TY    D + + G+I
Sbjct: 572 EKGLIPNRTTYDILRDEMMEKGFI 595



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 160/305 (52%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F    D G + + ++ N ++  L K G++     +   MI+  +  +  T++ +++G C 
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCK 241

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G+   A ++   M++ G   +V +Y+ +I+GYCK  ++  A +L  EM++K I P+ + 
Sbjct: 242 VGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            N L  G      V  A K+F+EMQR G+  +  TY + I+GLC NG + EA+ L   + 
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
            +  + ++  YN+LI+G CK   L+ A E+   +    L PNV+T++ +I      G+MD
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L   M +  V PNV T++ LI GF R     +  +L  +M+   +  D    +I+V
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481

Query: 457 DLLAK 461
           D L K
Sbjct: 482 DALCK 486



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 159/341 (46%), Gaps = 17/341 (4%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN-------------VIMDEL 179
           NV  +  ++     AK++N+ + L           N   F+             +I+D L
Sbjct: 106 NVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDML 165

Query: 180 C----KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
                KNG+MD A    D    +G R  A + N +L      GR+   + ++  M     
Sbjct: 166 VWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRI 225

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V ++ ++ING CK  + + A  +  +M + G  P V+ +NT+  G  +  ++ +A  
Sbjct: 226 GVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADA 285

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  EM    +  +  T+   IDG C++  +  A ++F  ++    + ++  YNSLI+GLC
Sbjct: 286 LLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLC 345

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
            +G+L+ AL L   +    L PNVVTY+ +I G C    + +AR++  D+ +  + PNVI
Sbjct: 346 SNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVI 405

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           TF+ LI  + +         L   M +  V P+ S  + ++
Sbjct: 406 TFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 61/383 (15%)

Query: 132 PNVVTY-TSVIRGFCYAKDWNEAKRLFIE---------MMDQGVQPNVVT--FNVIMDEL 179
           PN  T+ T  I      + W++ K +  E         + +   QP+++   F     E 
Sbjct: 42  PNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEF 101

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYN---TLLDGFCLTGRVNHAKELFVSME---SM 233
                +++  RLL L+       +A  YN    LLD F      +++  +F S+    S 
Sbjct: 102 GAIHNVEQFCRLLHLL------ANAKNYNKIRALLDSFAKNAHYSNS-TIFHSLSVLGSW 154

Query: 234 GCKHTVFSYSILINGYCKNKEIEGAL---------------------------------- 259
           GC +++    +L+  Y KN E++ AL                                  
Sbjct: 155 GCANSII-VDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 260 -SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            S+Y EM+ + I  +VV  + +  GL ++ + ++A  + ++M+  G +    TY T IDG
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G + +A  L   +   +   +   +N LIDG C+   +  A ++F  +    L PN
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVTY+ +I GLC++G++D+A  L   M    + PNV+T++ LI GF +     +  E+L 
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
            + +  + P+    + ++D   K
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGK 416


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/458 (31%), Positives = 233/458 (50%), Gaps = 11/458 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V  +I  S   P  +TF ++I  LC + ++ EA  +F K+  F   PD FTYT+L+ G C
Sbjct: 184 VYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHC 243

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R      A  +F+ M          C PN+VTY+T+I+GLC EG + +A ++L +M +K 
Sbjct: 244 RNRKLDKAFEVFDRMVKDG------CNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG 297

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I+P V TYT  I   C     ++A  L   M  +G  P+V T+  I+  L + GKM+ A 
Sbjct: 298 IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAI 357

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +   M++ G+ P+  TYN L++  C  GR   A ++F  ME  G      +Y+ +I G 
Sbjct: 358 GMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGL 417

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
               +IE A+ ++++ML  G  P VV +NTL V   +   +  A +    M+ +    D 
Sbjct: 418 FGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDE 477

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR--AYNSLIDGLCKSGRLEIALELF 367
            TY   I G CK G +  A   F+   +LKC        Y ++IDG CK G++++AL LF
Sbjct: 478 RTYCELISGFCKGGKLDSATSFFY--EMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLF 535

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +       ++ TY+ +I GL    +  +A      M E  + PN IT+  LI G  + 
Sbjct: 536 ERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKN 595

Query: 428 NEPSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEI 464
              +   ++ H+M++ N +P+A +  S++  L  + ++
Sbjct: 596 TATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV 633



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 218/439 (49%), Gaps = 8/439 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           +F +L+  L     +  A  ++ ++   G +P + T+ T++N LC+      A+ +F ++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                 F     P+  TYT++I G C+   +DKA E+  +M      PN VTY+++I G 
Sbjct: 224 ------FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C      EA  +  EM ++G++P V T+ V +  LC  G++D+A  L+  M + G  P  
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  ++ G    G++  A  ++  M   G      +Y+ LIN  C       AL ++  
Sbjct: 338 QTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDW 397

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M   G   +   +N +  GLF +  +E+A  +F++M ++G +    TY T I    K GY
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY 457

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYS 383
           +  A    + ++   CE D R Y  LI G CK G+L+ A   F   L CG+  PN  TY+
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI-SPNQWTYT 516

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            MI G C +G++D A  LF  MEEN    ++ T++ +I G  + N  S+  +   KM E 
Sbjct: 517 AMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576

Query: 444 NVMPDASIVSIVVDLLAKN 462
            + P+    + +++ L KN
Sbjct: 577 GLQPNTITYTSLINGLCKN 595



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 214/460 (46%), Gaps = 10/460 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +  ++LK    P+ VT+ +LI  LC E R   A  +F  +   G   +  TY
Sbjct: 351 GKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTY 410

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ GL        A+ +F +M            P  VTY T+I    K G+++ A   
Sbjct: 411 NQIIKGLFGMDDIEKAMVVFNKMLKDGPS------PTVVTYNTLIVENLKRGYLNNATRF 464

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  MK+ N +P+  TY  +I GFC     + A   F EM+  G+ PN  T+  ++D  CK
Sbjct: 465 LYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCK 524

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+D A  L + M ++G      TYN ++ G     R + A++    M   G +    +
Sbjct: 525 EGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTIT 584

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LING CKN     A  ++ EM  K   P+   + +L  GL +  +V+ A    + + 
Sbjct: 585 YTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLT 640

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG      TY T + GLC+ G   EA +L   ++       +  Y SL+   CKS +++
Sbjct: 641 ENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVD 700

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALE+F  +      P++  Y ++I  LC   + ++A ++F  + +     ++I + +L+
Sbjct: 701 CALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLV 760

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G ++  +    ++ L+ M+  N  P      I+   L+K
Sbjct: 761 DGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSK 800



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 194/394 (49%), Gaps = 10/394 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M  +    VV  ++LK   +P  VT+ +LI        +  A      ++   CEPD  T
Sbjct: 420 MDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERT 479

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++G C+      A + F EM     + G+   PN  TYT +IDG CKEG +D A  
Sbjct: 480 YCELISGFCKGGKLDSATSFFYEML----KCGI--SPNQWTYTAMIDGYCKEGKIDVALS 533

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M++     ++ TY ++I G      ++EA++   +M +QG+QPN +T+  +++ LC
Sbjct: 534 LFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLC 593

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN   + A ++   M +    P+A TY +L+ G C  G+V+ A+ L       GC+ T+ 
Sbjct: 594 KNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTID 649

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS L++G C+      A  L   M  KG+ P + I+ +L V   +  +V+ A ++F+ M
Sbjct: 650 TYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLM 709

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G     + Y+  I  LC      EA+ +F +L   +   D+  +  L+DGL + G  
Sbjct: 710 AVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDS 769

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           ++ ++    +      P++ TY I+   L   G+
Sbjct: 770 DLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 167/335 (49%), Gaps = 10/335 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++         +LK   +P+  T+T++I G C E +I  A +LF ++   GC   + TY
Sbjct: 491 GKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETY 550

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++GL + +    A     +M     E G+  +PNT+TYT++I+GLCK    + A ++
Sbjct: 551 NAIISGLSKGNRFSEAEKFCAKMT----EQGL--QPNTITYTSLINGLCKNTATNLAFKI 604

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ KN  PN  TYTS+I G C     + A+RL     + G +P + T++ ++  LC+
Sbjct: 605 FHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGLCR 660

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ +EAS+L++ M + G+ P    Y +LL   C + +V+ A E+F  M   G +  +F 
Sbjct: 661 EGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFI 720

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y +LI   C     E AL+++  +L K    D+++   L  GL +    +   K    M+
Sbjct: 721 YKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLME 780

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
                    TY      L K G  +   ++ + LR
Sbjct: 781 SRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLR 815



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 153/307 (49%), Gaps = 35/307 (11%)

Query: 157 FIEMMDQGVQPNVVT----FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           F+ M+++ V+  ++       ++M + C+N   DE  R+ D +  HG+     + ++ L 
Sbjct: 107 FVSMLNRLVKDKILAPADHVRILMIKACRNE--DELKRVTDFL--HGIS----SSDSGLF 158

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           GF                       T++S++ L+    K   +  A ++Y+++ S G+KP
Sbjct: 159 GF-----------------------TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKP 195

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
            ++  NT+   L +  +V+ A  +F+++ +  +  D +TY + I G C+N  + +A E+F
Sbjct: 196 SLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVF 255

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +    C  +   Y++LI+GLC  GR+  A+++   +    + P V TY++ I  LC+ 
Sbjct: 256 DRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDI 315

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G++D A +L   M +    P+V T+  +I G  R  +    I + HKM +  ++P+    
Sbjct: 316 GRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTY 375

Query: 453 SIVVDLL 459
           + +++ L
Sbjct: 376 NALINEL 382


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/425 (35%), Positives = 225/425 (52%), Gaps = 11/425 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV  G  ++ R++   FTP+ +T+  L+ GLC   RI EA AL +K+      P+V  
Sbjct: 293 LNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVH 348

Query: 61  YTTLVNGLCRTSHTIVALN-LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           + TLVNG  R      A   ++++M N NG       P+  T++T+++GLCK+G    A 
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMIN-NGYV-----PDVFTFSTLVNGLCKKGLFGSAL 402

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           EL+  M  K  KPN+ TYT +I GFC      EA  +  EM+ +G   N V +N ++  L
Sbjct: 403 ELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISAL 462

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK+GK+ EA  +   M   G +PD FT+N+L+ G C    +  A  L+  M   G     
Sbjct: 463 CKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANS 522

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +++ LI+ + +  EI+ AL L ++ML +G   D + +N L   L +   VE+   LF+E
Sbjct: 523 VTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEE 582

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M R G+     T    I+G C  G +  A+E    +       DI  YNSLI+GLCK GR
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGR 642

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ AL LF  L    + P+ +TY+ +I  LC +G  D A  L     EN  VPN +T+++
Sbjct: 643 IQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNI 702

Query: 420 LIRGF 424
           L+  F
Sbjct: 703 LVYNF 707



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 238/459 (51%), Gaps = 11/459 (2%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V +  ++L  + K    P+++ + +LI  L    R+ EA  L  ++ + GC PDV T+ T
Sbjct: 226 VDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT 285

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           ++ G CR +  +    L + M            PN +TY  ++ GLCK   +D+A+ LL 
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKG------FTPNDMTYGYLMHGLCKTCRIDEAQALLS 339

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR-LFIEMMDQGVQPNVVTFNVIMDELCKN 182
           ++      PNVV + +++ GF      NEA   ++ +M++ G  P+V TF+ +++ LCK 
Sbjct: 340 KVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKK 395

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G    A  L++ M   G +P+  TY  L+DGFC  G++  A  +   M + G       Y
Sbjct: 396 GLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGY 455

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+  CK+ +I  AL ++ EM SKG KPD+   N+L  GL  + ++E A  L+ +M  
Sbjct: 456 NALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVL 515

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV A++ T+ T I    + G I EA++L + +    C  D   YN LI  LCK+G +E 
Sbjct: 516 EGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEK 575

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            L LF  +    L P+++T +I+I G C  G++  A +   DM      P+++T++ LI 
Sbjct: 576 GLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLIN 635

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           G  +     + + L  K++   + PD+   + ++  L +
Sbjct: 636 GLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCR 674



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 172/347 (49%), Gaps = 5/347 (1%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           CEP+  +Y  ++D L        A  +   M  K + PN  T+  V++  C   + + A 
Sbjct: 171 CEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNAC 230

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  +M   G  PN + +  ++D L K  ++DEA +LL+ M   G  PD  T+NT++ GF
Sbjct: 231 LLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGF 290

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   RV    +L   M   G      +Y  L++G CK   I+ A +L    LSK   P+V
Sbjct: 291 CRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQAL----LSKVPGPNV 346

Query: 275 VIHNTLFVGLFEIHQVERAFK-LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           V  NTL  G     ++  A   ++D+M  NG   D +T+ T ++GLCK G    A+EL +
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVN 406

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +    C+ ++  Y  LIDG CK G+LE A  + R +       N V Y+ +I  LC  G
Sbjct: 407 DMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHG 466

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           ++ +A D+F +M      P++ TF+ LI G  R++E    + L   M
Sbjct: 467 KIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDM 513



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 153/327 (46%), Gaps = 6/327 (1%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLM 195
           Y  +I     A  +    RL ++M ++G+      F +IM    + G   +A+RLL D+ 
Sbjct: 107 YYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMK 166

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
             +   P   +YN +LD   +    + A  +F  M S G     +++ +++   C   E+
Sbjct: 167 GVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEV 226

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A  L  +M   G  P+ +I+ TL   L +  +V+ A KL +EM   G   D  T+ T 
Sbjct: 227 DNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTV 286

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I G C+   ++E  +L   + +     +   Y  L+ GLCK+ R++ A  L   +P    
Sbjct: 287 IYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG--- 343

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLD-MEENAVVPNVITFDMLIRGFIRINEPSKVI 434
            PNVV ++ ++ G   +G++++A     D M  N  VP+V TF  L+ G  +       +
Sbjct: 344 -PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSAL 402

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
           EL++ M      P+ +  +I++D   K
Sbjct: 403 ELVNDMDAKGCKPNLNTYTILIDGFCK 429



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 43/87 (49%)

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+  +Y++++  L        A ++F DM    V PN  TF ++++    +NE      L
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNE 463
           L  M +   +P++ I   ++D L+K +
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRD 259


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 226/430 (52%), Gaps = 11/430 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A+ + +LI  L    R+ E   L  ++ + GC PDV T+   ++GLC+      A  L
Sbjct: 268 PNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 327

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M            PN+ TY  ++ GLC+ G VD+A+ LL    +K   PNVV + ++
Sbjct: 328 VDRMLLRG------FTPNSFTYGVLMHGLCRMGKVDEARMLL----NKVPNPNVVLFNTL 377

Query: 141 IRGFCYAKDWNEAKRLFIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G+      +EAK +  E M+  G  P++ T+N ++  LCK G +  A  L++ M   G
Sbjct: 378 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 437

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TY  L+D FC  GR+  A+ +   M   G       Y+ LI+  CK+++++ AL
Sbjct: 438 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDAL 497

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +++ +M SKG KPD+   N+L  GL ++++ E A  L+ +M   GV A+T TY T I   
Sbjct: 498 NMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 557

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G + EA++L + +    C  D   YN LI  LC++G +E  L LF  +    L PN 
Sbjct: 558 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 617

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           ++ +I+I GLC  G +  A +   DM    + P+++T++ LI G  +     + + L  K
Sbjct: 618 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 677

Query: 440 MKEINVMPDA 449
           ++   + PDA
Sbjct: 678 LQVEGICPDA 687



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/432 (32%), Positives = 217/432 (50%), Gaps = 26/432 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  TF   I GLC   RI EAA L  ++ + G  P+ FTY  L++GLCR      A  L
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362

Query: 81  FEEMANGN--------------------------GEFGVVCEPNTVTYTTIIDGLCKEGF 114
             ++ N N                              V C P+  TY T+I GLCK+G+
Sbjct: 363 LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 422

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +  A+EL+ +M+ K  +PNV+TYT +I  FC      EA+ +  EM  +G+  N V +N 
Sbjct: 423 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 482

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  LCK+ K+ +A  +   M   G +PD FT+N+L+ G C   +   A  L+  M   G
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 542

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                 +Y+ LI+ + +   ++ AL L ++ML +G   D + +N L   L     +E+  
Sbjct: 543 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 602

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            LF++M   G+  +  +    I+GLC+ G I  A+E    +       DI  YNSLI+GL
Sbjct: 603 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 662

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK+GR + AL LF  L    + P+ +TY+ +I   C +G  D A  L     ++  +PN 
Sbjct: 663 CKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 722

Query: 415 ITFDMLIRGFIR 426
           +T+ +L+  FI+
Sbjct: 723 VTWYILVSNFIK 734



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/403 (33%), Positives = 206/403 (51%), Gaps = 15/403 (3%)

Query: 2   GRVSHGFVVLGRI------LKSCFTPDAVTFTSLIKGLCAESRIMEA-AALFTKLRVFGC 54
           G + HG   +G++      L     P+ V F +LI G  +  R+ EA A +   +   GC
Sbjct: 344 GVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGC 403

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
            PD+FTY TL+ GLC+  + + A  L  EM          CEPN +TYT +ID  CKEG 
Sbjct: 404 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG------CEPNVITYTILIDRFCKEGR 457

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +++A+ +L +M  K +  N V Y  +I   C  +   +A  +F +M  +G +P++ TFN 
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  LCK  K +EA  L   M+  GV  +  TYNTL+  F   G +  A +L   M   G
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C     +Y+ LI   C+   IE  L+L+ +M+SKG+ P+ +  N L  GL     ++ A 
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 637

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +   +M   G+  D  TY + I+GLCK G   EA+ LF  L++     D   YN+LI   
Sbjct: 638 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 697

Query: 355 CKSGRLEIA-LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
           CK G  + A L L R +  G  +PN VT+ I++     +G  +
Sbjct: 698 CKEGMFDDAHLLLSRGVDSG-FIPNEVTWYILVSNFIKEGDQE 739



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 228/469 (48%), Gaps = 21/469 (4%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   +L    +P   TF  ++K LC  + +  A AL   +   GC P+   Y TL++ L 
Sbjct: 222 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALS 281

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +       +N   ++       G  C P+  T+   I GLCK   + +A +L+ +M  + 
Sbjct: 282 KVGR----VNEVLKLLEEMLLMG--CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG 335

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PN  TY  ++ G C     +EA+ L    +++   PNVV FN +++     G++DEA 
Sbjct: 336 FTPNSFTYGVLMHGLCRMGKVDEARML----LNKVPNPNVVLFNTLINGYVSRGRLDEAK 391

Query: 190 RLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++ + M+  G  PD FTYNTL+ G C  G +  A+EL   M+  GC+  V +Y+ILI+ 
Sbjct: 392 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDR 451

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           +CK   +E A ++  EM  KG+  + V +N L   L +  +V+ A  +F +M   G   D
Sbjct: 452 FCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPD 511

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL-- 366
            +T+ + I GLCK     EA+ L+  + +     +   YN+LI    + G ++ AL+L  
Sbjct: 512 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 571

Query: 367 ---FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
              FR  P      + +TY+ +I  LC  G ++K   LF DM    + PN I+ ++LI G
Sbjct: 572 DMLFRGCPL-----DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 626

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
             R       +E L  M    + PD    + +++ L K   +  +L  F
Sbjct: 627 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 675



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 173/347 (49%), Gaps = 5/347 (1%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           CEP   +Y  ++D L           +  +M  K I P V T+  V++  C   + + A 
Sbjct: 196 CEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSAC 255

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  +M   G  PN + +  ++  L K G+++E  +LL+ M+  G  PD  T+N  + G 
Sbjct: 256 ALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 315

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   R++ A +L   M   G     F+Y +L++G C+  +++ A  L    L+K   P+V
Sbjct: 316 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML----LNKVPNPNV 371

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDE-MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           V+ NTL  G     +++ A  +  E M   G   D +TY T I GLCK GY+V A EL +
Sbjct: 372 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 431

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            ++I  CE ++  Y  LID  CK GRLE A  +   +    L  N V Y+ +I  LC D 
Sbjct: 432 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           ++  A ++F DM      P++ TF+ LI G  ++N+  + + L   M
Sbjct: 492 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM 538



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 174/378 (46%), Gaps = 16/378 (4%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  +ID L   G       LL+QMK + I      +  +++ +  A    +A RL ++M 
Sbjct: 132 YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM- 190

Query: 162 DQGV---QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            +GV   +P   ++NV++D L           +   M+  G+ P  +T+  ++   CL  
Sbjct: 191 -RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 249

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            V+ A  L   M   GC      Y  LI+   K   +   L L  EML  G  PDV   N
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFN 309

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
               GL ++ ++  A KL D M   G   +++TY   + GLC+ G + EA  L + +   
Sbjct: 310 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP-- 367

Query: 339 KCEFDIRAYNSLIDGLCKSGRLE----IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
               ++  +N+LI+G    GRL+    +  E   S+ CG   P++ TY+ +I GLC  G 
Sbjct: 368 --NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG---PDIFTYNTLILGLCKKGY 422

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +  AR+L  +M+     PNVIT+ +LI  F +     +   +L +M    +  +A   + 
Sbjct: 423 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 482

Query: 455 VVDLLAKNEISLNSLPSF 472
           ++  L K+E   ++L  F
Sbjct: 483 LISALCKDEKVQDALNMF 500


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/481 (32%), Positives = 239/481 (49%), Gaps = 34/481 (7%)

Query: 6   HGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HGF   GR+ ++C          + PD +T T +I GLC      +AA  F ++   GC+
Sbjct: 338 HGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCK 397

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           P+V TYTT++ GL +      A  + + M A+G       C P++VTY  ++DG CK G 
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG-------CFPDSVTYICLLDGFCKLGR 450

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA-------KDWNEAKRLFIEMMDQGVQP 167
           +D+A +LL ++   +  PN+  Y+S+++G C          D  E  +   E +D G+  
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC 510

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT--GRVNHAKE 225
           +++        LCK G++DEA R+   M+  G +PDA TYN L++G C +   RV  A  
Sbjct: 511 SIIV------GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   +E +G      +Y+ L  G CK  E++ A+ +  E  S+G   DVV +  L  GL 
Sbjct: 565 LLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC 624

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              QV+RA  LF EM R G A D   Y   I+GL K   + +A + F  +     +  + 
Sbjct: 625 YQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVA 684

Query: 346 AYNSLIDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            Y +L+  LC +G ++ A   F   L  G LV +V+ Y  +I G C   ++D A  LF D
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFED 744

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M     VP  +T   L  G +R  +  K  ELL +M      P A+  + ++D L K++ 
Sbjct: 745 MISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDE 804

Query: 465 S 465
           S
Sbjct: 805 S 805



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 236/500 (47%), Gaps = 45/500 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       VL  +L     P  VT+  L+  LC    +  A  LF  +   G  P+   Y
Sbjct: 274 GHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++G  ++     A +LF+EM     E G    P+ +T+T +IDGLCK G  ++A + 
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMV----EAGY--RPDVITHTVMIDGLCKSGNFEQAAKS 387

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M     KPNVVTYT++I+G         A R+   M+  G  P+ VT+  ++D  CK
Sbjct: 388 FEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCK 447

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLD----------------------------- 212
            G++DEA++LLD + +    P+   Y++L+                              
Sbjct: 448 LGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPG 507

Query: 213 -------GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE--IEGALSLYS 263
                  G C TGR++ A  +F  M S GCK    +Y+ILING C+++E  +E A +L  
Sbjct: 508 LCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           ++   G  PD V +  L +GL +I +V+RA K+ +E    G  AD   Y     GLC  G
Sbjct: 568 DLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            +  AV LF  +       D  AY  +I+GL K  +LE A + F  +      P V TY+
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYT 687

Query: 384 IMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
            ++  LC+ G +D+A   F  M     +V +V+ +D LI GF +  +    ++L   M  
Sbjct: 688 ALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747

Query: 443 INVMPDASIVSIVVDLLAKN 462
              +P A   + + D L ++
Sbjct: 748 RGNVPTAVTSASLFDGLVRS 767



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 220/460 (47%), Gaps = 9/460 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     V G++ K  F PDA+ + ++I GL       EA  +   +    C P   TY 
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LVN LC+      A  LF  MA           PN+V YT++I G  K G + +A  L 
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASG------FRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +   +P+V+T+T +I G C + ++ +A + F EMM  G +PNVVT+  I+  L K 
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI 413

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++  A R++  MI HG  PD+ TY  LLDGFC  GR++ A +L   ++       +  Y
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473

Query: 243 SILINGYCKNKEIEGAL-SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           S L+ G C    +E  L  L+ +  +     D  +  ++ VGL +  +++ A ++F  M 
Sbjct: 474 SSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533

Query: 302 RNGVAADTWTYRTFIDGLCKN--GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
             G   D  TY   I+GLC++    +  A  L H L ++    D   Y  L  GLCK G 
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGE 593

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A+++           +VV Y+ +  GLC  GQ+D+A  LF +M      P+   +  
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +I G I+  +     +   +M      P  +  + +V  L
Sbjct: 654 IINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQAL 693



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 227/450 (50%), Gaps = 12/450 (2%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           S  + +   +LK+   P+  +F  LI+      R  +A   F  ++   C+PD+ T+  L
Sbjct: 136 SQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLIL 195

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V+ LC+      A  +F EM       G V  P+   +T ++  L K   V +A+E+  Q
Sbjct: 196 VDCLCKAGMDEKAFEVFHEMM----AMGFV-PPDRALHTAMVRTLLKAKRVKEAREVFGQ 250

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M+     P+ + Y ++I G   A    EA ++   M+ +   P  VT+ ++++ LCK G 
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           ++ A  L  +M   G RP++  Y +L+ GF  +GR+  A  LF  M   G +  V ++++
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+G CK+   E A   + EM+  G KP+VV + T+  GL +I +V  AF++   M  +G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D+ TY   +DG CK G + EA +L   L       +++ Y+SL+ GLC  G +E  L
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490

Query: 365 -ELFRSLPCGV--LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            +LF         L P +   SI++ GLC  G++D+A  +F  M      P+  T+++LI
Sbjct: 491 DDLFEQSKAAAENLDPGLCC-SIIV-GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 422 RGFIRI--NEPSKVIELLHKMKEINVMPDA 449
            G  R   N   +   LLH ++ +  +PDA
Sbjct: 549 NGLCRSRENRVERAFALLHDLEMVGYLPDA 578



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 211/446 (47%), Gaps = 51/446 (11%)

Query: 1   MGRVSHGFVVL-GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +GRV++ F ++ G I   CF PD+VT+  L+ G C   R+ EAA L  +L      P++ 
Sbjct: 413 IGRVANAFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 60  TYTTLVNGLCRTSHTIVAL-NLFEE--MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
            Y++LV GLC        L +LFE+   A  N + G+ C        +II GLCK G +D
Sbjct: 472 LYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--------SIIVGLCKTGRLD 523

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ---GVQPNVVTFN 173
           +A  +  +M  +  KP+  TY  +I G C +++ N  +R F  + D    G  P+ VT+ 
Sbjct: 524 EACRIFQRMVSEGCKPDATTYNILINGLCRSRE-NRVERAFALLHDLEMVGYLPDAVTYT 582

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            +   LCK G++D A ++L+     G   D   Y  L  G C  G+V+ A  LF  M   
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G      +Y  +ING  K K++E A   + EM+ KG KP V  +  L   L     V+ A
Sbjct: 643 GGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
           F  F                   +G+   G +V +V ++  L               I G
Sbjct: 703 FHRF-------------------EGMLARGELVGSVMIYDAL---------------IHG 728

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            CK+ +++ AL+LF  +     VP  VT + +  GL   G+ +KA++L  +M      P+
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPH 788

Query: 414 VITFDMLIRGFIRINEPSKVIELLHK 439
             TF  ++ G  + +E  K+++L+ +
Sbjct: 789 AATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 149/299 (49%), Gaps = 1/299 (0%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G Q +V T+N +M+ L       +   + + M++ G+ P+ F++N L+  F  T R + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIHNTLFV 282
              F  M+   CK  + ++ IL++  CK    E A  ++ EM++ G + PD  +H  +  
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
            L +  +V+ A ++F +M++ G   D   Y T IDGL K G+  EA+++   +    C  
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
               Y  L++ LCK+G LE A ELFR +      PN V Y+ +I G    G+M +A  LF
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +M E    P+VIT  ++I G  +     +  +   +M      P+    + ++  L+K
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 118/268 (44%), Gaps = 36/268 (13%)

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
           E  G +H VF+Y+ L+N     K      +++ EML  GI P+    N L        + 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL--------------- 335
           + A   F+ M+R     D  T+   +D LCK G   +A E+FH +               
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 336 -------------------RILKCEF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
                              ++ KC F  D  AYN++IDGL K+G  + AL++  ++    
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
            VP  VTY I++  LC  G +++A +LF  M  +   PN + +  LI GF +     +  
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
            L  +M E    PD    ++++D L K+
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKS 378


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 243/463 (52%), Gaps = 6/463 (1%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +GR++    +L  +    +TPD ++++++I G C    + +   L  K++  G +P+ +T
Sbjct: 682  LGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYT 741

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y +++  LCR      A   F EM  G G       P+T+ YTT++DG CK G +  A +
Sbjct: 742  YGSIIGLLCRICKLAEAEEAFSEMI-GQGIL-----PDTIVYTTLVDGFCKRGDIRAASK 795

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               +M  ++I P+V+TYT++I GFC   D  EA +LF EM+ +G++P+++TF  +M+  C
Sbjct: 796  FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYC 855

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            K G + +A R+ + MIQ G  P+  TY TL+DG C  G ++ A EL   M  +G +  +F
Sbjct: 856  KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 915

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +Y+ ++NG CK+  IE A+ L  E  + G+  D V + TL     +  ++++A ++  EM
Sbjct: 916  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEM 975

Query: 301  QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               G+     T+   ++G C +G + +  +L + +       +   +N L+   C    L
Sbjct: 976  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNL 1035

Query: 361  EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            + A  +++ +    + P+  TY  ++ G CN   M +A  LF +M+      +V T+ +L
Sbjct: 1036 KAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVL 1095

Query: 421  IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            I+GF +  +  +  E+  +M+   +  D  I     D   K +
Sbjct: 1096 IKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGK 1138



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 230/436 (52%), Gaps = 7/436 (1%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT-SHTIVALNL 80
            D   F    + L     + EA  +F K+  +G    V +    +  L +  + T  A+ +
Sbjct: 597  DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIV 656

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            F E      E GV    N  +Y  +I  +C+ G +++A  LLL M+ K   P+V++Y++V
Sbjct: 657  FREFP----EVGVCW--NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTV 710

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
            I G+C   + ++  +L  +M  +G++PN  T+  I+  LC+  K+ EA      MI  G+
Sbjct: 711  INGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI 770

Query: 201  RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             PD   Y TL+DGFC  G +  A + F  M S      V +Y+ +I+G+C+  ++  A  
Sbjct: 771  LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 830

Query: 261  LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            L+ EML +G++PD++    L  G  +   ++ AF++ + M + G + +  TY T IDGLC
Sbjct: 831  LFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 890

Query: 321  KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            K G +  A EL H +  +  + +I  YNS+++GLCKSG +E A++L        L  + V
Sbjct: 891  KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 950

Query: 381  TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            TY+ ++   C  G+MDKA+++  +M    + P ++TF++L+ GF          +LL+ M
Sbjct: 951  TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010

Query: 441  KEINVMPDASIVSIVV 456
                + P+A+  + +V
Sbjct: 1011 LAKGIAPNATTFNCLV 1026



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 165/307 (53%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F E  + GV  NV ++N+++  +C+ G+++EA  LL LM   G  PD  +Y+T+++G+C
Sbjct: 656 VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G ++   +L   M+  G K   ++Y  +I   C+  ++  A   +SEM+ +GI PD +
Sbjct: 716 RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           ++ TL  G  +   +  A K F EM    +  D  TY   I G C+ G +VEA +LFH +
Sbjct: 776 VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                E DI  +  L++G CK+G ++ A  +   +      PNVVTY+ +I GLC +G +
Sbjct: 836 LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           D A +L  +M +  + PN+ T++ ++ G  +     + ++L+ + +   +  D    + +
Sbjct: 896 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955

Query: 456 VDLLAKN 462
           +D   K+
Sbjct: 956 MDAYCKS 962



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 6/197 (3%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G +     +L  +L     P  VTF  L+ G C    + +   L   +   G  P+  T+
Sbjct: 963  GEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1022

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              LV   C  ++   A  ++++M +     GV  EP+  TY  ++ G C    + +A  L
Sbjct: 1023 NCLVKQYCIRNNLKAATAIYKDMCSR----GV--EPDGKTYENLVKGHCNARNMKEAWFL 1076

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +MK K    +V TY+ +I+GF   K + EA+ +F +M   G+  +   F+   D   K
Sbjct: 1077 FQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYK 1136

Query: 182  NGKMDEASRLLDLMIQH 198
              + D     +D +I++
Sbjct: 1137 GKRPDTIVDPIDEIIEN 1153


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/473 (32%), Positives = 251/473 (53%), Gaps = 34/473 (7%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+  T   LI GLC   R  +A  +F K+ V GC P+ F++  LV G CR   ++ AL 
Sbjct: 148 SPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRAL- 206

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
              E+ +G G FGV  +PN V Y T+I   C+EG  ++A+ L+ +M++  + P+VVT+ S
Sbjct: 207 ---ELLDGMGSFGV--QPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNS 261

Query: 140 VIRGFCYAKDWNEAKRLFIEM-MDQGV---QPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
            I   C A    EA R+F +M +D+ +   +PN+ TFN++++  CK G ++EA  L++ M
Sbjct: 262 RISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESM 321

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            ++G   +  +YN  L G    G++  A+     M   G +  ++S++ +++G CKN  I
Sbjct: 322 KRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLI 381

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  +   M+S GI PD V ++TL  G     +V +A  +  EM R G + +T+T    
Sbjct: 382 SDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNIL 441

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR------S 369
           +  L K G I EA +L   +     + D    N +IDGLCKSG+L+ A+E+        S
Sbjct: 442 LHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGS 501

Query: 370 LPCGVL-----------------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
              G L                 +P+++TYSI+I GLC  G++D+AR  F++M   ++ P
Sbjct: 502 AALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHP 561

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVDLLAKNEI 464
           + I +D  I  F +  + S    +L  M++        +  S+++ L +KN+I
Sbjct: 562 DSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQI 614



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 231/503 (45%), Gaps = 60/503 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V + +LI   C E R  EA  L  ++R  G  PDV T+ + ++ LC     + A  +
Sbjct: 219 PNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRI 278

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M   + E G+   PN  T+  +++G CKEG +++AK L+  MK       + +Y   
Sbjct: 279 FRDMQI-DEELGLP-RPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIW 336

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G        EA+    EM+D+G++PN+ +FN +MD LCKNG + +A  ++ LMI  G+
Sbjct: 337 LLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGI 396

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL--------------- 245
            PD  TY+TLL G C TG+V  A  +   M   GC    ++ +IL               
Sbjct: 397 GPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEK 456

Query: 246 --------------------INGYCKNKEIEGALSLYSEML------------------- 266
                               I+G CK+ +++ A+ +   M                    
Sbjct: 457 LLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVD 516

Query: 267 --SKGIK--PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
             S G K  PD++ ++ +  GL +  +++ A K F EM    +  D+  Y TFI   CK+
Sbjct: 517 SSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKH 576

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G I  A  +   +    C   ++ YNSLI GL    ++     L   +    + PN+ TY
Sbjct: 577 GKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTY 636

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + MI  LC  G++  A  L  +M +  + PN+ +F +LI+ F + ++   V E+      
Sbjct: 637 NNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALS 696

Query: 443 INVMPDASIVSIVVDLLAKNEIS 465
           I    +A    +  +LL   E+S
Sbjct: 697 ICGHKEALYSLMFNELLIGGEVS 719



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 208/457 (45%), Gaps = 56/457 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV---FGC-EPD 57
           GR      ++ R+ +    PD VTF S I  LC+  +I+EA+ +F  +++    G   P+
Sbjct: 235 GRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPN 294

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMA-NGN---------GEFGVV------------- 94
           + T+  ++ G C+      A  L E M  NGN            G+V             
Sbjct: 295 ITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALK 354

Query: 95  ------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                  EPN  ++ T++DGLCK G +  A+ ++  M    I P+ VTY++++ G C   
Sbjct: 355 EMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTG 414

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
              +A  +  EMM +G  PN  T N+++  L K G++ EA +LL  M +     D  T N
Sbjct: 415 KVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCN 474

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMG-----------------------CKHTVFSYSIL 245
            ++DG C +G+++ A E+   M   G                       C   + +YSI+
Sbjct: 475 IVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSII 534

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ING CK   ++ A   + EM+ K + PD +I++T      +  ++  AF++  +M++ G 
Sbjct: 535 INGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGC 594

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
                TY + I GL     I E   L   ++      +I  YN++I  LC+ GR++ A  
Sbjct: 595 NKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATS 654

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           L   +    + PN+ ++ ++I   C        +++F
Sbjct: 655 LLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVF 691



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 224/492 (45%), Gaps = 42/492 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++    + L  ++     P+  +F +++ GLC    I +A  +   +   G  PD  TY
Sbjct: 344 GKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTY 403

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL++G C T   + A N+  EM          C PNT T   ++  L KEG + +A++L
Sbjct: 404 STLLHGCCSTGKVLKANNILHEMMRRG------CSPNTYTCNILLHSLWKEGRIFEAEKL 457

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL------------------FIEMMDQ 163
           L +M +++   + VT   VI G C +   +EA  +                  FI ++D 
Sbjct: 458 LQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDS 517

Query: 164 GVQ-----PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
                   P+++T+++I++ LCK G++DEA +    M+   + PD+  Y+T +  FC  G
Sbjct: 518 SSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHG 577

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           +++ A  +   ME  GC  ++ +Y+ LI G     +I     L  +M  KGI P++  +N
Sbjct: 578 KISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYN 637

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN---GYIVEAVELFHTL 335
            +   L E  +++ A  L DEM + G++ +  ++R  I   CK    G + E  E+  ++
Sbjct: 638 NMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSI 697

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               C      Y+ + + L   G +  A ELF +            Y+ +I  LC D  +
Sbjct: 698 ----CGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEML 753

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           + A D+   M +     +  +F  +I G  +  +     EL  +M       D +   +V
Sbjct: 754 ENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMM------DMASEGMV 807

Query: 456 VDLLAKNEISLN 467
            + + +NE + N
Sbjct: 808 ENKITRNESAFN 819



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 212/455 (46%), Gaps = 58/455 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAAL----FTKLRVFGCE-----PDVFTYTTLVNGLCRT 71
           P  V+  SLI    A  RI+  + L    F++ + F  +     P V+ Y  ++    R 
Sbjct: 74  PQEVSHVSLI----ALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLRE 129

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                   L+++M       GV   P T T   +I GLC  G  + A+E+  +M  K  +
Sbjct: 130 DKVDSFSWLYKDMVVA----GV--SPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCR 183

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           PN  ++  ++RG+C A     A  L   M   GVQPN V +N ++   C+ G+ +EA RL
Sbjct: 184 PNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERL 243

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM---ESMGC-KHTVFSYSILIN 247
           ++ M + G+ PD  T+N+ +   C  G++  A  +F  M   E +G  +  + ++++++ 
Sbjct: 244 VERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLE 303

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+CK    EG L                               E A  L + M+RNG   
Sbjct: 304 GFCK----EGML-------------------------------EEAKTLVESMKRNGNLM 328

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  +Y  ++ GL +NG ++EA      +     E +I ++N+++DGLCK+G +  A  + 
Sbjct: 329 ELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIM 388

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    + P+ VTYS ++ G C+ G++ KA ++  +M      PN  T ++L+    + 
Sbjct: 389 GLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKE 448

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               +  +LL KM E +   D    +IV+D L K+
Sbjct: 449 GRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKS 483


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 242/499 (48%), Gaps = 63/499 (12%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + V  T+L+KG C + +++ A   F K+   G  P+  TY  L+   C+  +   A +L+
Sbjct: 348 NVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLY 407

Query: 82  EEMANGN---------------------------GEFGVVCE-PNTVTYTTIIDGLCKEG 113
            +M N N                            +  V C+  N  TY +++  LCKEG
Sbjct: 408 TQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEG 467

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            + +A  L  +M DK + P  V+Y S+I G C   + + A  +F +M+D G++PNV+T++
Sbjct: 468 KMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYS 527

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           ++MD   KNG  + A  + D M+   + P  FTYN  ++G C  GR + A+++       
Sbjct: 528 ILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK 587

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G      +Y+ +++G+ K   +  AL+ Y EM   G+ P+V+ + TL  G  + +  + A
Sbjct: 588 GFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLA 647

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL------------------ 335
            K+ +EM+  G+  D   Y   IDG CK   I  A  LF  L                  
Sbjct: 648 LKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISG 707

Query: 336 ---------------RILK--CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
                          R+L      D++ Y +LIDGL K GRL +AL+L+  +    ++P+
Sbjct: 708 YRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPD 767

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           ++ Y+++I GLC  GQ++ A+ +  +ME +++ PNV  ++ LI G  +     +   L +
Sbjct: 768 IIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHN 827

Query: 439 KMKEINVMPDASIVSIVVD 457
           +M +  + P+ +   I+++
Sbjct: 828 EMLDKGLTPNDTTYDILIN 846



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 218/410 (53%), Gaps = 6/410 (1%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           +C   +  T+ SL+  LC E ++ EA  L+ K+   G  P   +Y +++ G CR  +  +
Sbjct: 447 ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDM 506

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A ++F +M +         +PN +TY+ ++DG  K G  + A  +  +M D+NI P+  T
Sbjct: 507 AASVFSDMLDCG------LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFT 560

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y   I G C     +EA+ +  + +++G  P  +T+N IMD   K G +  A      M 
Sbjct: 561 YNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMC 620

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + GV P+  TY TL++GFC     + A ++   M + G +  + +Y  LI+G+CK ++IE
Sbjct: 621 ESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIE 680

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L+SE+L  G+ P+ VI+N+L  G   ++ +E A  L   M   G++ D  TY T I
Sbjct: 681 TASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLI 740

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           DGL K G +V A++L+  +       DI  Y  LI+GLC  G+LE A ++   +    + 
Sbjct: 741 DGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSIT 800

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           PNV  Y+ +I G    G + +A  L  +M +  + PN  T+D+LI G I+
Sbjct: 801 PNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIK 850



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 220/443 (49%), Gaps = 7/443 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + P   TFTS+I     +  ++EA  L  ++   G + +V   TTLV G C+    + AL
Sbjct: 310 WVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSAL 369

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
             F++M N NG       PN VTY  +I+  CK G + KA +L  QMK+KNI P V    
Sbjct: 370 EFFDKM-NENGP-----SPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVN 423

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+IRGF   +   EA +LF E +   +  N+ T+N ++  LCK GKM EA+ L   M+  
Sbjct: 424 SLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDK 482

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P   +YN+++ G C  G ++ A  +F  M   G K  V +YSIL++GY KN + E A
Sbjct: 483 GLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYA 542

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             ++  M+ + I P    +N    GL ++ +   A  +  +    G      TY + +DG
Sbjct: 543 FYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDG 602

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             K G +  A+  +  +       ++  Y +LI+G CK+   ++AL++   +    L  +
Sbjct: 603 FIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELD 662

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +  Y  +I G C    ++ A  LF ++ +  + PN + ++ LI G+  +N     + L  
Sbjct: 663 IAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQK 722

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
           +M    +  D    + ++D L K
Sbjct: 723 RMLGEGISCDLQTYTTLIDGLLK 745



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 213/448 (47%), Gaps = 19/448 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    +  ++L     P  V++ S+I G C +  +  AA++F+ +   G +P+V TY
Sbjct: 467 GKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITY 526

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++G  +   T  A  +F+ M + N    +V  P+  TY   I+GLCK G   +A+++
Sbjct: 527 SILMDGYFKNGDTEYAFYVFDRMVDEN----IV--PSDFTYNIKINGLCKVGRTSEAQDM 580

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +  +K   P  +TY S++ GF      + A   + EM + GV PNV+T+  +++  CK
Sbjct: 581 LKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCK 640

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N   D A ++ + M   G+  D   Y  L+DGFC    +  A  LF  +   G       
Sbjct: 641 NNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVI 700

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GY     +E AL+L   ML +GI  D+  + TL  GL +  ++  A  L+ EM 
Sbjct: 701 YNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMS 760

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D   Y   I+GLC  G +  A ++   +       ++  YN+LI G  K+G L+
Sbjct: 761 AKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQ 820

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +    L PN  TY I+I G    G       L L  ++              
Sbjct: 821 EAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLLSLKFKDG------------- 867

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA 449
           +G  RINE   + +++ K     + P+A
Sbjct: 868 KGMKRINEQDSIKKVIEKAVNKYLRPEA 895



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 206/430 (47%), Gaps = 9/430 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F  D   +  L+      +++ +A   F +L      P +     L+  L +      A 
Sbjct: 170 FDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAR 229

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            ++E+M    G  G     +  T   ++    K+   ++AK+  L+ K + +K +   Y+
Sbjct: 230 EVYEKMV-LKGVHG-----DCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYS 283

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            VI+ FC   D   A  L  +M D+G  P+  TF  ++    K G M EA RL D M+  
Sbjct: 284 IVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSC 343

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV+ +     TL+ G+C   ++  A E F  M   G      +Y++LI   CKN  +  A
Sbjct: 344 GVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKA 403

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             LY++M +K I P V I N+L  G  ++   E A KLFDE     + A+ +TY + +  
Sbjct: 404 YDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSW 462

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LPCGVLVP 377
           LCK G + EA  L+  +          +YNS+I G C+ G L++A  +F   L CG L P
Sbjct: 463 LCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG-LKP 521

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           NV+TYSI++ G   +G  + A  +F  M +  +VP+  T+++ I G  ++   S+  ++L
Sbjct: 522 NVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDML 581

Query: 438 HKMKEINVMP 447
            K  E   +P
Sbjct: 582 KKFVEKGFVP 591



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 210/427 (49%), Gaps = 15/427 (3%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           EA   F + +  G + D   Y+ ++   C+     +A  L ++M +     G V  P+  
Sbjct: 262 EAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDK----GWV--PSEG 315

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T+T++I    K+G + +A  L  +M    ++ NVV  T++++G+C       A   F +M
Sbjct: 316 TFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM 375

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            + G  PN VT+ V+++  CKNG M +A  L   M    + P  F  N+L+ GF      
Sbjct: 376 NENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESR 435

Query: 221 NHAKELFVSMESMGCK-HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
             A +LF   E++ C    +F+Y+ L++  CK  ++  A +L+ +ML KG+ P  V +N+
Sbjct: 436 EEASKLFD--EAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNS 493

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL---R 336
           + +G      ++ A  +F +M   G+  +  TY   +DG  KNG    A  +F  +    
Sbjct: 494 MILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDEN 553

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
           I+  +F    YN  I+GLCK GR   A ++ +       VP  +TY+ ++ G   +G + 
Sbjct: 554 IVPSDF---TYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVS 610

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A   + +M E+ V PNVIT+  LI GF + N     +++ ++M+   +  D +    ++
Sbjct: 611 SALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALI 670

Query: 457 DLLAKNE 463
           D   K +
Sbjct: 671 DGFCKKQ 677



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 6/283 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR S    +L + ++  F P  +T+ S++ G   E  +  A   + ++   G  P+V T
Sbjct: 571 VGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVIT 630

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL+NG C+ ++T +AL +  EM N   E  +        Y  +IDG CK+  ++ A  
Sbjct: 631 YTTLINGFCKNNNTDLALKMRNEMRNKGLELDI------AAYGALIDGFCKKQDIETASW 684

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++ D  + PN V Y S+I G+    +   A  L   M+ +G+  ++ T+  ++D L 
Sbjct: 685 LFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLL 744

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++  A  L   M   G+ PD   Y  L++G C  G++ +A+++   ME       V 
Sbjct: 745 KEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVP 804

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            Y+ LI G+ K   ++ A  L++EML KG+ P+   ++ L  G
Sbjct: 805 IYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING 847


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 229/472 (48%), Gaps = 41/472 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             PD  T+ +LI GLC   R  EA AL  ++     +P+V  Y  L++G  R  +   A 
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 242

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            + +EM       GV  +PN +TY  ++ GLCK G +D+A  LL QM   + +P+ +TY 
Sbjct: 243 KMIKEMVAA----GV--QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 296

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G     +  +A RL  EM + G+ PNV T+++++  LC++G+ ++AS LL+ M   
Sbjct: 297 LIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 356

Query: 199 GVRPDAFTYNTLLDGFCL-----------------------------------TGRVNHA 223
           G++P+AF Y  L+ G+C                                     GRV  +
Sbjct: 357 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 416

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            + F  M+  G     F+YS LI+GY KN ++E A  L   ML  G+KP+ VI+  L   
Sbjct: 417 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 476

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            F+   +E+    F  M   GV  D   Y   I  L  +G +  A  +   +       D
Sbjct: 477 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPD 536

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y+SLI GLCK+   E A  +   +    + PN+V Y+ +I GLC  G +  AR++F 
Sbjct: 537 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 596

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            +    +VPN +T+  LI G  ++ + S    L ++M    + PDA + S++
Sbjct: 597 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 648



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 232/465 (49%), Gaps = 14/465 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF----GCEPD 57
           GRV     V+  +      P      +L+K L       +A AL  K+R F    G  PD
Sbjct: 61  GRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRA----DAMALLWKVREFMVGAGISPD 116

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           V+TY+TL+   C+      A  +  EM     E G  C  NTVTY  +I GLC+ G V++
Sbjct: 117 VYTYSTLIEAYCKVREFDTAKKVLVEMR----ERG--CGLNTVTYNVLIAGLCRSGAVEE 170

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A      M+D  + P+  TY ++I G C ++  NEAK L  EM    ++PNVV +  ++D
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
              + G  DEA +++  M+  GV+P+  TY+ L+ G C  G+++ A  L   M     + 
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              +Y+++I G+ ++   + A  L SEM + GI P+V  ++ +  GL +  + E+A  L 
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           +EM   G+  + + Y   I G C+ G +  A E+F  +  +    D+  YNSLI GL K 
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GR+E + + F  +    L+PN  TYS +I G   +G ++ A  L   M +  + PN + +
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 470

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             L+  + + ++  KV      M +  VM D  I  I++  L+ +
Sbjct: 471 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 515



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 233/461 (50%), Gaps = 7/461 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++    ++L ++++    PD +T+  +I+G        +A  L +++   G  P+V+T
Sbjct: 270 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYT 329

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GLC++     A +L EEM           +PN   Y  +I G C+EG V  A E
Sbjct: 330 YSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAFVYAPLISGYCREGNVSLACE 383

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M   N+ P++  Y S+I G        E+ + F +M ++G+ PN  T++ ++    
Sbjct: 384 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 443

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG ++ A +L+  M+  G++P+   Y  LL+ +  +  +      F SM   G      
Sbjct: 444 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 503

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y ILI+    +  +E A  + SE+   G  PDV ++++L  GL +    E+AF + DEM
Sbjct: 504 IYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 563

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + GV  +   Y   IDGLCK+G I  A  +F+++       +   Y SLIDG CK G +
Sbjct: 564 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 623

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  L+  +    + P+   YS++  G  + G +++A  L  +M       ++ +F+ L
Sbjct: 624 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNL 682

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + GF +  +  + ++LLH +    ++P+A  +  ++  L++
Sbjct: 683 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 723



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 207/435 (47%), Gaps = 40/435 (9%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F +L  +  +  +P+  T++ +I GLC      +A+ L  ++   G +P+ F Y  L++
Sbjct: 311 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 370

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G CR  +  +A  +F++M   N        P+   Y ++I GL K G V+++ +   QM+
Sbjct: 371 GYCREGNVSLACEIFDKMTKVN------VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 424

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++ + PN  TY+ +I G+    D   A++L   M+D G++PN V +  +++   K+  ++
Sbjct: 425 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 484

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           + S     M+  GV  D   Y  L+     +G +  A  +   +E  G    V  YS LI
Sbjct: 485 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLI 544

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G CK  + E A  +  EM  KG+ P++V +N L  GL +   +  A  +F+ +   G+ 
Sbjct: 545 SGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 604

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTL------------------------------- 335
            +  TY + IDG CK G I  A  L++ +                               
Sbjct: 605 PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFL 664

Query: 336 ---RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
                L+    I ++N+L+DG CK G+++  L+L   +    LVPN +T   +I GL   
Sbjct: 665 IEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEA 724

Query: 393 GQMDKARDLFLDMEE 407
           G++ +   +F+++++
Sbjct: 725 GKLSEVHTIFVELQQ 739



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 203/425 (47%), Gaps = 73/425 (17%)

Query: 105 IIDGLCKEGFVDKAKELLLQMKDK-----------------------------------N 129
           ++D   K G V  A E++L M+D+                                    
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I P+V TY+++I  +C  ++++ AK++ +EM ++G   N VT+NV++  LC++G ++EA 
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
                M  +G+ PD FTY  L++G C + R N AK L   M     K  V  Y+ LI+G+
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER----------------- 292
            +    + A  +  EM++ G++P+ + ++ L  GL ++ Q++R                 
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292

Query: 293 ------------------AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
                             AF+L  EM+  G++ + +TY   I GLC++G   +A +L   
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     + +   Y  LI G C+ G + +A E+F  +    ++P++  Y+ +I GL   G+
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           ++++   F  M+E  ++PN  T+  LI G+++  +     +L+ +M +  + P+     I
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND---VI 469

Query: 455 VVDLL 459
            +DLL
Sbjct: 470 YIDLL 474



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 182/388 (46%), Gaps = 26/388 (6%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L +   P+ V +  L++       I + ++ F  +   G   D   Y  L++ L  + 
Sbjct: 457 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG 516

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           +   A  +  E+   NG       P+   Y+++I GLCK    +KA  +L +M  K + P
Sbjct: 517 NMEAAFRVLSEIEK-NGSV-----PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 570

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N+V Y ++I G C + D + A+ +F  ++ +G+ PN VT+  ++D  CK G +  A  L 
Sbjct: 571 NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 630

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M+  G+ PDAF Y+ L  G    G +  A  L   M   G   ++ S++ L++G+CK 
Sbjct: 631 NEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKR 689

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +++  L L   ++ +G+ P+ +    +  GL E  ++     +F E+Q+    +    +
Sbjct: 690 GKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHF 749

Query: 313 RT-FIDGL-----------------CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            + F+D +                 CK G + +A+ L   +          +Y +++D L
Sbjct: 750 SSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNL 809

Query: 355 CKSGRLEIALELFRSL-PCGVLVPNVVT 381
           C+ G+L  AL L + +   G L P +V 
Sbjct: 810 CRKGKLSEALNLLKEMDKRGNLQPTLVA 837



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 152/354 (42%), Gaps = 53/354 (14%)

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C    +N A  L I+M+     P VV    I   L  +G    A  +LD+         
Sbjct: 5   MCAGSLFNLANGLLIKMIRAYPSPPVV-LASIHRALSDSGHRSPA--VLDV--------- 52

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT------------------------- 238
                 L+D +  +GRV  A E+ + M   G   +                         
Sbjct: 53  ------LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVRE 106

Query: 239 ----------VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
                     V++YS LI  YCK +E + A  +  EM  +G   + V +N L  GL    
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            VE AF    +M+  G+  D +TY   I+GLCK+    EA  L   +   + + ++  Y 
Sbjct: 167 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 226

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +LIDG  + G  + A ++ + +    + PN +TY  ++ GLC  GQMD+A  L   M  +
Sbjct: 227 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 286

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +  P+ IT++++I G  R +       LL +M+   + P+    SI++  L ++
Sbjct: 287 SHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 340



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 29/253 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S+   V   IL     P+ VT+TSLI G C    I  A  L+ ++   G  PD F Y
Sbjct: 586 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 645

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + L  G         A+ L EEM   G+            ++  ++DG CK G + +  +
Sbjct: 646 SVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS--------SFNNLVDGFCKRGKMQETLK 697

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE-------------------MM 161
           LL  +  + + PN +T  ++I G   A   +E   +F+E                   M+
Sbjct: 698 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 757

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           +QG  P  V  ++I D  CK G +D+A  L D+++         +Y  ++D  C  G+++
Sbjct: 758 NQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLS 816

Query: 222 HAKELFVSMESMG 234
            A  L   M+  G
Sbjct: 817 EALNLLKEMDKRG 829



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 70/151 (46%)

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +D   K+G + +A E+   +R       IR  N+L+  L ++  + +  ++   +    
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + P+V TYS +I   C   + D A+ + ++M E     N +T+++LI G  R     +  
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
                M++  ++PD      +++ L K+  S
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRS 203


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 226/430 (52%), Gaps = 11/430 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A+ + +LI  L    R+ E   L  ++ + GC PDV T+   ++GLC+      A  L
Sbjct: 250 PNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 309

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M            PN+ TY  ++ GLC+ G VD+A+ LL    +K   PNVV + ++
Sbjct: 310 VDRMLLRG------FTPNSFTYGVLMHGLCRMGKVDEARMLL----NKVPNPNVVLFNTL 359

Query: 141 IRGFCYAKDWNEAKRLFIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G+      +EAK +  E M+  G  P++ T+N ++  LCK G +  A  L++ M   G
Sbjct: 360 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 419

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TY  L+D FC  GR+  A+ +   M   G       Y+ LI+  CK+++++ AL
Sbjct: 420 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDAL 479

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +++ +M SKG KPD+   N+L  GL ++++ E A  L+ +M   GV A+T TY T I   
Sbjct: 480 NMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 539

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G + EA++L + +    C  D   YN LI  LC++G +E  L LF  +    L PN 
Sbjct: 540 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 599

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           ++ +I+I GLC  G +  A +   DM    + P+++T++ LI G  +     + + L  K
Sbjct: 600 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 659

Query: 440 MKEINVMPDA 449
           ++   + PDA
Sbjct: 660 LQVEGICPDA 669



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/432 (32%), Positives = 217/432 (50%), Gaps = 26/432 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  TF   I GLC   RI EAA L  ++ + G  P+ FTY  L++GLCR      A  L
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344

Query: 81  FEEMANGN--------------------------GEFGVVCEPNTVTYTTIIDGLCKEGF 114
             ++ N N                              V C P+  TY T+I GLCK+G+
Sbjct: 345 LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 404

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +  A+EL+ +M+ K  +PNV+TYT +I  FC      EA+ +  EM  +G+  N V +N 
Sbjct: 405 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 464

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  LCK+ K+ +A  +   M   G +PD FT+N+L+ G C   +   A  L+  M   G
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 524

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                 +Y+ LI+ + +   ++ AL L ++ML +G   D + +N L   L     +E+  
Sbjct: 525 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 584

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            LF++M   G+  +  +    I+GLC+ G I  A+E    +       DI  YNSLI+GL
Sbjct: 585 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 644

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK+GR + AL LF  L    + P+ +TY+ +I   C +G  D A  L     ++  +PN 
Sbjct: 645 CKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 704

Query: 415 ITFDMLIRGFIR 426
           +T+ +L+  FI+
Sbjct: 705 VTWYILVSNFIK 716



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/403 (33%), Positives = 206/403 (51%), Gaps = 15/403 (3%)

Query: 2   GRVSHGFVVLGRI------LKSCFTPDAVTFTSLIKGLCAESRIMEA-AALFTKLRVFGC 54
           G + HG   +G++      L     P+ V F +LI G  +  R+ EA A +   +   GC
Sbjct: 326 GVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGC 385

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
            PD+FTY TL+ GLC+  + + A  L  EM          CEPN +TYT +ID  CKEG 
Sbjct: 386 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG------CEPNVITYTILIDRFCKEGR 439

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +++A+ +L +M  K +  N V Y  +I   C  +   +A  +F +M  +G +P++ TFN 
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  LCK  K +EA  L   M+  GV  +  TYNTL+  F   G +  A +L   M   G
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C     +Y+ LI   C+   IE  L+L+ +M+SKG+ P+ +  N L  GL     ++ A 
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 619

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +   +M   G+  D  TY + I+GLCK G   EA+ LF  L++     D   YN+LI   
Sbjct: 620 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 679

Query: 355 CKSGRLEIA-LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
           CK G  + A L L R +  G  +PN VT+ I++     +G  +
Sbjct: 680 CKEGMFDDAHLLLSRGVDSG-FIPNEVTWYILVSNFIKEGDQE 721



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 228/469 (48%), Gaps = 21/469 (4%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   +L    +P   TF  ++K LC  + +  A AL   +   GC P+   Y TL++ L 
Sbjct: 204 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALX 263

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +       +N   ++       G  C P+  T+   I GLCK   + +A +L+ +M  + 
Sbjct: 264 KVGR----VNEVLKLLEEMLLMG--CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG 317

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PN  TY  ++ G C     +EA+ L    +++   PNVV FN +++     G++DEA 
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEARML----LNKVPNPNVVLFNTLINGYVSRGRLDEAK 373

Query: 190 RLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++ + M+  G  PD FTYNTL+ G C  G +  A+EL   M+  GC+  V +Y+ILI+ 
Sbjct: 374 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDR 433

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           +CK   +E A ++  EM  KG+  + V +N L   L +  +V+ A  +F +M   G   D
Sbjct: 434 FCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPD 493

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL-- 366
            +T+ + I GLCK     EA+ L+  + +     +   YN+LI    + G ++ AL+L  
Sbjct: 494 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 553

Query: 367 ---FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
              FR  P      + +TY+ +I  LC  G ++K   LF DM    + PN I+ ++LI G
Sbjct: 554 DMLFRGCPL-----DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 608

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
             R       +E L  M    + PD    + +++ L K   +  +L  F
Sbjct: 609 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 657



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 173/347 (49%), Gaps = 5/347 (1%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           CEP   +Y  ++D L           +  +M  K I P V T+  V++  C   + + A 
Sbjct: 178 CEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSAC 237

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  +M   G  PN + +  ++  L K G+++E  +LL+ M+  G  PD  T+N  + G 
Sbjct: 238 ALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 297

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   R++ A +L   M   G     F+Y +L++G C+  +++ A  L    L+K   P+V
Sbjct: 298 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML----LNKVPNPNV 353

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDE-MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           V+ NTL  G     +++ A  +  E M   G   D +TY T I GLCK GY+V A EL +
Sbjct: 354 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 413

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            ++I  CE ++  Y  LID  CK GRLE A  +   +    L  N V Y+ +I  LC D 
Sbjct: 414 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           ++  A ++F DM      P++ TF+ LI G  ++N+  + + L   M
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM 520



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 174/378 (46%), Gaps = 16/378 (4%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  +ID L   G       LL+QMK + I      +  +++ +  A    +A RL ++M 
Sbjct: 114 YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM- 172

Query: 162 DQGV---QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            +GV   +P   ++NV++D L           +   M+  G+ P  +T+  ++   CL  
Sbjct: 173 -RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 231

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            V+ A  L   M   GC      Y  LI+   K   +   L L  EML  G  PDV   N
Sbjct: 232 EVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFN 291

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
               GL ++ ++  A KL D M   G   +++TY   + GLC+ G + EA  L + +   
Sbjct: 292 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP-- 349

Query: 339 KCEFDIRAYNSLIDGLCKSGRLE----IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
               ++  +N+LI+G    GRL+    +  E   S+ CG   P++ TY+ +I GLC  G 
Sbjct: 350 --NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG---PDIFTYNTLILGLCKKGY 404

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +  AR+L  +M+     PNVIT+ +LI  F +     +   +L +M    +  +A   + 
Sbjct: 405 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 464

Query: 455 VVDLLAKNEISLNSLPSF 472
           ++  L K+E   ++L  F
Sbjct: 465 LISALCKDEKVQDALNMF 482


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 228/473 (48%), Gaps = 41/473 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             PD  T+ +LI GLC   R  EA AL  ++     +P+V  Y  L++G  R  +   A 
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 369

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            + +EM       GV  +PN +TY  ++ GLCK G +D+A  LL QM   + +P+ +TY 
Sbjct: 370 KMIKEMVAA----GV--QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 423

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G        +A RL  EM + G+ PNV T+++++  LC++G+ ++AS LL+ M   
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483

Query: 199 GVRPDAFTYNTLLDGFCL-----------------------------------TGRVNHA 223
           G++P+AF Y  L+ G+C                                     GRV  +
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 543

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            + F  M+  G     F+YS LI+GY KN ++E A  L   ML  G+KP+ VI+  L   
Sbjct: 544 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 603

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            F+   +E+    F  M   GV  D   Y   I  L  +G +  A  +   +       D
Sbjct: 604 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 663

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y+SLI GLCK+   E A  +   +    + PN+V Y+ +I GLC  G +  AR++F 
Sbjct: 664 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 723

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +    +VPN +T+  LI G  ++ + S    L ++M    + PDA + S++ 
Sbjct: 724 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 776



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 232/465 (49%), Gaps = 14/465 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF----GCEPD 57
           GRV     V+  +      P      +L+K L       +A AL  K+R F    G  PD
Sbjct: 188 GRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRA----DAMALLWKVREFMVGAGISPD 243

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           V+TY+TL+   C+      A  +  EM     E G  C  NTVTY  +I GLC+ G V++
Sbjct: 244 VYTYSTLIEAYCKVREFDTAKKVLVEMR----ERG--CGLNTVTYNVLIAGLCRSGAVEE 297

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A      M+D  + P+  TY ++I G C ++  NEAK L  EM    ++PNVV +  ++D
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
              + G  DEA +++  M+  GV+P+  TY+ L+ G C  G+++ A  L   M     + 
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              +Y+++I G+ ++   + A  L SEM + GI P+V  ++ +  GL +  + E+A  L 
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           +EM   G+  + + Y   I G C+ G +  A E+F  +  +    D+  YNSLI GL K 
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GR+E + + F  +    L+PN  TYS +I G   +G ++ A  L   M +  + PN + +
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 597

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             L+  + + ++  KV      M +  VM D  I  I++  L+ +
Sbjct: 598 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 642



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 232/461 (50%), Gaps = 7/461 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++    ++L ++++    PD +T+  +I+G        +A  L +++   G  P+V+T
Sbjct: 397 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 456

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GLC++     A +L EEM           +PN   Y  +I G C+EG V  A E
Sbjct: 457 YSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAFVYAPLISGYCREGNVSLACE 510

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M   N+ P++  Y S+I G        E+ + F +M ++G+ PN  T++ ++    
Sbjct: 511 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 570

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG ++ A +L+  M+  G++P+   Y  LL+ +  +  +      F SM   G      
Sbjct: 571 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 630

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y ILI+    +  +E A  + S +   G  PDV ++++L  GL +    E+AF + DEM
Sbjct: 631 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 690

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + GV  +   Y   IDGLCK+G I  A  +F+++       +   Y SLIDG CK G +
Sbjct: 691 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 750

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  L+  +    + P+   YS++  G  + G +++A  L  +M       ++ +F+ L
Sbjct: 751 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNL 809

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + GF +  +  + ++LLH +    ++P+A  +  ++  L++
Sbjct: 810 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 850



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 207/435 (47%), Gaps = 40/435 (9%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F +L  +  +  +P+  T++ +I GLC      +A+ L  ++   G +P+ F Y  L++
Sbjct: 438 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 497

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G CR  +  +A  +F++M   N        P+   Y ++I GL K G V+++ +   QM+
Sbjct: 498 GYCREGNVSLACEIFDKMTKVN------VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 551

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++ + PN  TY+ +I G+    D   A++L   M+D G++PN V +  +++   K+  ++
Sbjct: 552 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 611

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           + S     M+  GV  D   Y  L+     +G +  A  +   +E  G    V  YS LI
Sbjct: 612 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLI 671

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G CK  + E A  +  EM  KG+ P++V +N L  GL +   +  A  +F+ +   G+ 
Sbjct: 672 SGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 731

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTL------------------------------- 335
            +  TY + IDG CK G I  A  L++ +                               
Sbjct: 732 PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFL 791

Query: 336 ---RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
                L+    I ++N+L+DG CK G+++  L+L   +    LVPN +T   +I GL   
Sbjct: 792 IEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEA 851

Query: 393 GQMDKARDLFLDMEE 407
           G++ +   +F+++++
Sbjct: 852 GKLSEVHTIFVELQQ 866



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 221/486 (45%), Gaps = 63/486 (12%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRT 71
           ++  S   PDA  F  L   LCA S    A  L  K+ R +   P V    ++   L  +
Sbjct: 114 QLAPSAPAPDA--FAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLA--SIHRALSDS 169

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--- 128
            H   A+                          ++D   K G V  A E++L M+D+   
Sbjct: 170 GHRSPAV-----------------------LDVLVDTYKKSGRVQDAAEVVLMMRDRGMA 206

Query: 129 --------------------------------NIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
                                            I P+V TY+++I  +C  ++++ AK++
Sbjct: 207 PSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKV 266

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            +EM ++G   N VT+NV++  LC++G ++EA      M  +G+ PD FTY  L++G C 
Sbjct: 267 LVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCK 326

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           + R N AK L   M     K  V  Y+ LI+G+ +    + A  +  EM++ G++P+ + 
Sbjct: 327 SRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKIT 386

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           ++ L  GL ++ Q++RA  L  +M R+    DT TY   I+G  ++    +A  L   + 
Sbjct: 387 YDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEME 446

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 ++  Y+ +I GLC+SG  E A +L   +    L PN   Y+ +I G C +G + 
Sbjct: 447 NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVS 506

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A ++F  M +  V+P++  ++ LI G  ++    +  +   +M+E  ++P+    S ++
Sbjct: 507 LACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLI 566

Query: 457 DLLAKN 462
               KN
Sbjct: 567 HGYLKN 572



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 193/426 (45%), Gaps = 34/426 (7%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L +   P+ V +  L++       I + ++ F  +   G   D   Y  L++ L  + 
Sbjct: 584 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG 643

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           +   A  +   +   NG       P+   Y+++I GLCK    +KA  +L +M  K + P
Sbjct: 644 NMEAAFRVLSGIEK-NGSV-----PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 697

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N+V Y ++I G C + D + A+ +F  ++ +G+ PN VT+  ++D  CK G +  A  L 
Sbjct: 698 NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 757

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M+  G+ PDAF Y+ L  G    G +  A  L   M   G   ++ S++ L++G+CK 
Sbjct: 758 NEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKR 816

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +++  L L   ++ +G+ P+ +    +  GL E  ++     +F E+Q+    +    +
Sbjct: 817 GKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHF 876

Query: 313 RT-FIDGL-----------------CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            + F+D +                 CK G + +A+ L   +          +Y +++D L
Sbjct: 877 SSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNL 936

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C+ G+L  AL L + +    + P+     I++  L   G +          E N V+ N+
Sbjct: 937 CRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQ---------EHNTVLDNM 987

Query: 415 ITFDML 420
           +    L
Sbjct: 988 LCHKWL 993



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 29/253 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S+   V   IL     P+ VT+TSLI G C    I  A  L+ ++   G  PD F Y
Sbjct: 713 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 772

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + L  G         A+ L EEM   G+            ++  ++DG CK G + +  +
Sbjct: 773 SVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS--------SFNNLVDGFCKRGKMQETLK 824

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE-------------------MM 161
           LL  +  + + PN +T  ++I G   A   +E   +F+E                   M+
Sbjct: 825 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 884

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           +QG  P  V  ++I D  CK G +D+A  L D+++         +Y  ++D  C  G+++
Sbjct: 885 NQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLS 943

Query: 222 HAKELFVSMESMG 234
            A  L   M+  G
Sbjct: 944 EALNLLKEMDKRG 956



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 70/151 (46%)

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +D   K+G + +A E+   +R       IR  N+L+  L ++  + +  ++   +    
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + P+V TYS +I   C   + D A+ + ++M E     N +T+++LI G  R     +  
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
                M++  ++PD      +++ L K+  S
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRS 330


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 226/473 (47%), Gaps = 41/473 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             PD  T+ +LI GLC   R  EA AL  ++     +P+V  Y  L++G  R  +   A 
Sbjct: 288 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            + +EM           +PN +TY  ++ GLCK G +D+A  LL QM   + +P+ +TY 
Sbjct: 348 KMIKEMVAAG------VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 401

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G        +A RL  EM + G+ PNV T+++++  LC++G+ ++AS LL+ M   
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461

Query: 199 GVRPDAFTYNTLLDGFCL-----------------------------------TGRVNHA 223
           G++P+AF Y  L+ G+C                                     GRV  +
Sbjct: 462 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 521

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            + F  M+  G     F+YS LI+GY KN ++E A  L   ML  G+KP+ VI+  L   
Sbjct: 522 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 581

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            F+   +E+    F  M   GV  D   Y   I  L  +G +  A  +   +       D
Sbjct: 582 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 641

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y+SLI GLCK+   E A  +   +    + PN+V Y+ +I GLC  G +  AR++F 
Sbjct: 642 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 701

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +    +VPN +T+  LI G  ++ + S    L ++M    + PDA + S++ 
Sbjct: 702 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 754



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 235/474 (49%), Gaps = 49/474 (10%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           S ++  C       A  +  ++R  GC  +  TY  L+ GLCR+     A    ++M   
Sbjct: 227 SALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME-- 284

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
             ++G+V  P+  TY  +I+GLCK    ++AK LL +M    +KPNVV Y ++I GF   
Sbjct: 285 --DYGLV--PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 340

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
            + +EA ++  EM+  GVQPN +T++ ++  LCK G+MD AS LL  M++   RPD  TY
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N +++G         A  L   ME+ G    V++YSI+I+G C++ E E A  L  EM +
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 460

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           KG+KP+  ++  L  G      V  A ++FD+M +  V  D + Y + I GL K G + E
Sbjct: 461 KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEE 520

Query: 328 AVELFHTLR---ILKCEFDIRAYNSLIDGLCKSGRLEIALEL------------------ 366
           + + F  ++   +L  EF    Y+ LI G  K+G LE A +L                  
Sbjct: 521 STKYFAQMQERGLLPNEF---TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 577

Query: 367 -----FRS-------------LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
                F+S             L  GV++ N + Y I+I  L + G M+ A  +   +E+N
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRI-YGILIHNLSSSGNMEAAFRVLSGIEKN 636

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             VP+V  +  LI G  +  +  K   +L +M +  V P+    + ++D L K+
Sbjct: 637 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 690



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 216/439 (49%), Gaps = 6/439 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     F ++  ++ +   P+ +T+ +L++GLC   ++  A+ L  ++      PD  TY
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ G  R      A  L  EM N          PN  TY+ +I GLC+ G  +KA +L
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAG------ISPNVYTYSIMIHGLCQSGEPEKASDL 454

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  K +KPN   Y  +I G+C   + + A  +F +M    V P++  +N ++  L K
Sbjct: 455 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 514

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++E+++    M + G+ P+ FTY+ L+ G+   G +  A++L   M   G K     
Sbjct: 515 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 574

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  L+  Y K+ +IE   S +  ML +G+  D  I+  L   L     +E AF++   ++
Sbjct: 575 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 634

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +NG   D   Y + I GLCK     +A  +   +     + +I  YN+LIDGLCKSG + 
Sbjct: 635 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 694

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +F S+    LVPN VTY+ +I G C  G +  A  L+ +M    + P+   + +L 
Sbjct: 695 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 754

Query: 422 RGFIRINEPSKVIELLHKM 440
            G     +  + + L+ +M
Sbjct: 755 TGCSSAGDLEQAMFLIEEM 773



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 232/461 (50%), Gaps = 7/461 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++    ++L ++++    PD +T+  +I+G        +A  L +++   G  P+V+T
Sbjct: 375 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 434

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GLC++     A +L EEM           +PN   Y  +I G C+EG V  A E
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAFVYAPLISGYCREGNVSLACE 488

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M   N+ P++  Y S+I G        E+ + F +M ++G+ PN  T++ ++    
Sbjct: 489 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 548

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG ++ A +L+  M+  G++P+   Y  LL+ +  +  +      F SM   G      
Sbjct: 549 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 608

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y ILI+    +  +E A  + S +   G  PDV ++++L  GL +    E+AF + DEM
Sbjct: 609 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 668

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + GV  +   Y   IDGLCK+G I  A  +F+++       +   Y SLIDG CK G +
Sbjct: 669 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 728

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  L+  +    + P+   YS++  G  + G +++A  L  +M       ++ +F+ L
Sbjct: 729 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNL 787

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + GF +  +  + ++LLH +    ++P+A  +  ++  L++
Sbjct: 788 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 828



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 207/435 (47%), Gaps = 40/435 (9%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F +L  +  +  +P+  T++ +I GLC      +A+ L  ++   G +P+ F Y  L++
Sbjct: 416 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 475

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G CR  +  +A  +F++M   N        P+   Y ++I GL K G V+++ +   QM+
Sbjct: 476 GYCREGNVSLACEIFDKMTKVN------VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 529

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++ + PN  TY+ +I G+    D   A++L   M+D G++PN V +  +++   K+  ++
Sbjct: 530 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 589

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           + S     M+  GV  D   Y  L+     +G +  A  +   +E  G    V  YS LI
Sbjct: 590 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLI 649

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G CK  + E A  +  EM  KG+ P++V +N L  GL +   +  A  +F+ +   G+ 
Sbjct: 650 SGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 709

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTL------------------------------- 335
            +  TY + IDG CK G I  A  L++ +                               
Sbjct: 710 PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFL 769

Query: 336 ---RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
                L+    I ++N+L+DG CK G+++  L+L   +    LVPN +T   +I GL   
Sbjct: 770 IEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEA 829

Query: 393 GQMDKARDLFLDMEE 407
           G++ +   +F+++++
Sbjct: 830 GKLSEVHTIFVELQQ 844



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 181/388 (46%), Gaps = 26/388 (6%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L +   P+ V +  L++       I + ++ F  +   G   D   Y  L++ L  + 
Sbjct: 562 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG 621

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           +   A  +   +   NG       P+   Y+++I GLCK    +KA  +L +M  K + P
Sbjct: 622 NMEAAFRVLSGIEK-NGSV-----PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 675

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N+V Y ++I G C + D + A+ +F  ++ +G+ PN VT+  ++D  CK G +  A  L 
Sbjct: 676 NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 735

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M+  G+ PDAF Y+ L  G    G +  A  L   M   G   ++ S++ L++G+CK 
Sbjct: 736 NEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKR 794

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +++  L L   ++ +G+ P+ +    +  GL E  ++     +F E+Q+    +    +
Sbjct: 795 GKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHF 854

Query: 313 RT-FIDGL-----------------CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            + F+D +                 CK G + +A+ L   +          +Y +++D L
Sbjct: 855 SSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNL 914

Query: 355 CKSGRLEIALELFRSL-PCGVLVPNVVT 381
           C+ G+L  AL L + +   G L P +V 
Sbjct: 915 CRKGKLSEALNLLKEMDKRGNLQPTLVA 942



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 121/277 (43%), Gaps = 35/277 (12%)

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE---------- 256
           + + L+ +C     + AK++ V M   GC     +Y++LI G C++  +E          
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 257 -----------GAL--------------SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
                      GAL              +L  EM    +KP+VV++  L  G       +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            AFK+  EM   GV  +  TY   + GLCK G +  A  L   +       D   YN +I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           +G  +    + A  L   +    + PNV TYSIMI GLC  G+ +KA DL  +M    + 
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           PN   +  LI G+ R    S   E+  KM ++NV+PD
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 501



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 29/253 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S+   V   IL     P+ VT+TSLI G C    I  A  L+ ++   G  PD F Y
Sbjct: 691 GDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 750

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + L  G         A+ L EEM   G+            ++  ++DG CK G + +  +
Sbjct: 751 SVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS--------SFNNLVDGFCKRGKMQETLK 802

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE-------------------MM 161
           LL  +  + + PN +T  ++I G   A   +E   +F+E                   M+
Sbjct: 803 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 862

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           +QG  P  V  ++I D  CK G +D+A  L D+++         +Y  ++D  C  G+++
Sbjct: 863 NQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLS 921

Query: 222 HAKELFVSMESMG 234
            A  L   M+  G
Sbjct: 922 EALNLLKEMDKRG 934


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 247/487 (50%), Gaps = 13/487 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     V  R+      P   ++ +++  L       +A  ++ +++  G  PDV T+
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTF 149

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T  +   CRT   + AL L   M +        CE N V Y T+I G  +E +  +A EL
Sbjct: 150 TIRIKSFCRTKRPLAALRLLNNMPSQG------CELNAVVYCTVISGFYEENYQVEAYEL 203

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    I P++ T+  ++   C      E ++L  +++  GV PN+ TFN+ +  LC+
Sbjct: 204 FNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCR 263

Query: 182 NG-------KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
            G       K+ EA   L  M+  G+ PD FTYNT++ G+   G++  A  +    +  G
Sbjct: 264 KGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKG 323

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                F+Y  LI G C++ +I+ AL+L+ E L KG+KP +V++NTL  GL +   V +A 
Sbjct: 324 FVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKAL 383

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +L ++M + G++ D WTY   I+GLCK G + +A  L +         DI  +N+LIDG 
Sbjct: 384 QLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGY 443

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK  +++ A+ +  S+    + P+V+TY+ ++ GLC   + +   + F  + E   +PN+
Sbjct: 444 CKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNI 503

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
           IT+++LI    +  + ++ ++LL +++   ++PD      V+     N     +   F  
Sbjct: 504 ITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRR 563

Query: 475 HEQQEEV 481
            EQQ  +
Sbjct: 564 MEQQYRI 570



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 249/486 (51%), Gaps = 29/486 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLC-------AESRIMEAAALFTKLRVFGC 54
           G +  G  +L ++LK+   P+  TF   I+GLC       A S+++EA     K+   G 
Sbjct: 230 GHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGL 289

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF-GVVCEPNTVTYTTIIDGLCKEG 113
           EPD FTY T++ G  +      A  + ++      +F G V  P+  TY ++I G+C++G
Sbjct: 290 EPDDFTYNTIIYGYSKVGKIQDASRILKD-----AKFKGFV--PDEFTYCSLIIGVCQDG 342

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            +D A  L  +   K +KP++V Y ++I+G        +A +L  +M  +G+ P++ T+N
Sbjct: 343 DIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYN 402

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           ++++ LCK G + +A+ LL+  I  G  PD FT+NTL+DG+C   ++++A  +  SM S 
Sbjct: 403 LVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSH 462

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G    V +Y+ ++NG CK  + E  +  +  ++ KG  P+++ +N L   L +  +V  A
Sbjct: 463 GVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEA 522

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLID 352
             L +E++  G+  D  ++ T I G C NG + EA +LF  + +  +    +  YN +I+
Sbjct: 523 LDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMIN 582

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
              +   +++A +LF  +      P+  TY +MI G C  G ++   D  L   E   VP
Sbjct: 583 AFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVP 642

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV-------------SIVVDLL 459
           ++ TF  +I      +   + + ++H M    V+P+A +               IV DLL
Sbjct: 643 SLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTIFDADKKAVAAPKIIVEDLL 702

Query: 460 AKNEIS 465
            K+ I+
Sbjct: 703 KKSHIT 708



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 242/521 (46%), Gaps = 49/521 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  +    V  R+      PD  TFT  IK  C   R + A  L   +   GCE +   Y
Sbjct: 125 GYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVY 184

Query: 62  TTLVNGLCRTSHTIVALNLFEEM---------ANGNGEFGVVCE---------------- 96
            T+++G    ++ + A  LF +M         A  N    ++C+                
Sbjct: 185 CTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLK 244

Query: 97  ----PNTVTYTTIIDGLCKEGFVD-------KAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
               PN  T+   I GLC++G ++       +A+  L +M +K ++P+  TY ++I G+ 
Sbjct: 245 NGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYS 304

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                 +A R+  +   +G  P+  T+  ++  +C++G +D A  L +  +  G++P   
Sbjct: 305 KVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIV 364

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            YNTL+ G    G V  A +L   M   G    +++Y+++ING CK   +  A +L +  
Sbjct: 365 LYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAA 424

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           ++KG  PD+   NTL  G  +  +++ A  + D M  +GV  D  TY + ++GLCK    
Sbjct: 425 IAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKP 484

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            + +E F  +    C  +I  YN LI+ LCK+ ++  AL+L   +    L+P+ V++  +
Sbjct: 485 EDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTV 544

Query: 386 IGGLCNDGQMDKARDLFLDMEEN-AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           I G CN+G +D+A  LF  ME+   +   V T++++I  F    +     +L H+M +  
Sbjct: 545 ISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKG 604

Query: 445 VMPDASIVSIVVDLLAK------------NEISLNSLPSFT 473
             PD+    +++D   K             EI +  +PS T
Sbjct: 605 CDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLT 645



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 186/373 (49%), Gaps = 14/373 (3%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMK---DKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           +TY  +I+ L   G  D  + +L++M+   D ++   V  Y S +R +       EA  +
Sbjct: 41  LTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGV--YVSAMRNYGRKGKVQEAVDV 98

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F  M     +P++ ++N IM+ L + G  ++A ++   M   G+ PD  T+   +  FC 
Sbjct: 99  FERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCR 158

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILING-YCKNKEIEGALSLYSEMLSKGIKPDVV 275
           T R   A  L  +M S GC+     Y  +I+G Y +N ++E A  L+++ML  GI P + 
Sbjct: 159 TKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVE-AYELFNKMLRLGIFPHIA 217

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY-------IVEA 328
             N L   L +   ++   KL +++ +NGV  + +T+  FI GLC+ G        +VEA
Sbjct: 218 TFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEA 277

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
               H +     E D   YN++I G  K G+++ A  + +       VP+  TY  +I G
Sbjct: 278 ENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIG 337

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +C DG +D A  LF +     + P+++ ++ LI+G  +     K ++L++ M +  + PD
Sbjct: 338 VCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPD 397

Query: 449 ASIVSIVVDLLAK 461
               ++V++ L K
Sbjct: 398 IWTYNLVINGLCK 410



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 142/278 (51%), Gaps = 9/278 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG VS    +L   +   + PD  TF +LI G C   ++  A  +   +   G  PDV T
Sbjct: 411 MGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVIT 470

Query: 61  YTTLVNGLCRTSHTIVALNLFEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y +++NGLC+ +     +  F+  M  G       C PN +TY  +I+ LCK   V +A 
Sbjct: 471 YNSILNGLCKAAKPEDVMETFKMIMEKG-------CLPNIITYNILIESLCKARKVTEAL 523

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDE 178
           +LL +++++ + P+ V++ +VI GFC   D +EA +LF  M  Q  +   V T+N++++ 
Sbjct: 524 DLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINA 583

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
             +   MD A +L   M   G  PD++TY  ++DGFC  G VN   +  +    +G   +
Sbjct: 584 FSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPS 643

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           + ++  +IN  C    +  A+ +   M+  G+ P+ V+
Sbjct: 644 LTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 236/454 (51%), Gaps = 17/454 (3%)

Query: 6   HGFVVLGR----------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           H F  LG+          ++ +   P   T+  +I  +  E  I  A  LF +++  G  
Sbjct: 106 HKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLI 165

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PD  TY ++++G  +       +  FEEM +      + CEP+ +TY ++I+  CK G +
Sbjct: 166 PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS------MSCEPDVITYNSLINCFCKSGKL 219

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            K  E   +MK   +KPNVV+Y++++  FC      +A + +++M   G  PN  T+  +
Sbjct: 220 PKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSL 279

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D  CK G + +A RL + M++ GV  +  TY  L+DG C   R+  A++LF  M + G 
Sbjct: 280 VDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGV 339

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + SY+ LI+G+ K K ++ AL L +E+  +GI+PD++++ T   GL  + ++E A  
Sbjct: 340 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKV 399

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + +EMQ NG+ A+T  Y T +D   K+G   E + L   ++ L  E  +  +  LIDGLC
Sbjct: 400 VMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLC 459

Query: 356 KSGRLEIALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           K+  +  A++ F  +     L PN   Y+ MI GLC + Q+  A  LF  M +  +VP+ 
Sbjct: 460 KNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDR 519

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             +  L+ G ++     + + L  KM EI +  D
Sbjct: 520 TAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLD 553



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 202/380 (53%), Gaps = 7/380 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++  G      + +S   P+ V++++L+   C E  + +A   +  +R  G  P+ FTY
Sbjct: 217 GKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTY 276

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+LV+  C+  +   A  L  EM     E GV  E N VTYT +IDGLC    + +A++L
Sbjct: 277 TSLVDANCKIGNLSDAFRLANEML----EVGV--EWNVVTYTALIDGLCDAERMKEAEKL 330

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + PN+ +Y ++I GF  AK+ + A  L  E+  +G+QP+++ +   +  LC 
Sbjct: 331 FGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCG 390

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K++ A  +++ M ++G++ +   Y TL+D +  +G       L   M+ +  + TV +
Sbjct: 391 LEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVT 450

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +LI+G CKNK +  A+  +  M +  G++P+  ++  +  GL + +QV+ A  LF++M
Sbjct: 451 FCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQM 510

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + G+  D   Y + +DG  K G ++EA+ L   +  +  + D+ AY SL+ G  +  +L
Sbjct: 511 AQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQL 570

Query: 361 EIALELFRSLPCGVLVPNVV 380
           + A      +    ++P+ V
Sbjct: 571 QKARSFLEEMIGEEILPDEV 590



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 204/389 (52%), Gaps = 3/389 (0%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           VC P    +  +   L   G +++A +   +MK   + P   +   ++  F      +  
Sbjct: 58  VCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 117

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           KR F +M+  G +P V T+N+++D + K G ++ A  L + M   G+ PD  TYN+++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +   GR++     F  M+SM C+  V +Y+ LIN +CK+ ++   L  Y EM   G+KP+
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV ++TL     +   +++A K + +M+R G   + +TY + +D  CK G + +A  L +
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +  +  E+++  Y +LIDGLC + R++ A +LF  +    ++PN+ +Y+ +I G     
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            MD+A +L  +++   + P+++ +   I G   + +      ++++M+E  +  +  I +
Sbjct: 358 NMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYT 417

Query: 454 IVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
            ++D   K   S N      + E+ +E+D
Sbjct: 418 TLMDAYFK---SGNPTEGLHLLEEMQELD 443



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 186/376 (49%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P T +   ++    K G  D  K     M     KP V TY  +I       D   A+ L
Sbjct: 96  PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGL 155

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F EM  +G+ P+ VT+N ++D   K G++D+     + M      PD  TYN+L++ FC 
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCK 215

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           +G++    E +  M+  G K  V SYS L++ +CK   ++ A+  Y +M   G  P+   
Sbjct: 216 SGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFT 275

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +L     +I  +  AF+L +EM   GV  +  TY   IDGLC    + EA +LF  + 
Sbjct: 276 YTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMV 335

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 ++ +YN+LI G  K+  ++ ALEL   L    + P+++ Y   I GLC   +++
Sbjct: 336 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIE 395

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A+ +  +M+EN +  N + +  L+  + +   P++ + LL +M+E++         +++
Sbjct: 396 AAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLI 455

Query: 457 DLLAKNEISLNSLPSF 472
           D L KN++   ++  F
Sbjct: 456 DGLCKNKLVSKAIDYF 471



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 154/301 (51%), Gaps = 7/301 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +S  F +   +L+     + VT+T+LI GLC   R+ EA  LF K+   G  P++ +
Sbjct: 286 IGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLAS 345

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++G  +  +   AL L  E+       G   +P+ + Y T I GLC    ++ AK 
Sbjct: 346 YNALIHGFVKAKNMDRALELLNELK------GRGIQPDLLLYGTFIWGLCGLEKIEAAKV 399

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++ +M++  IK N + YT+++  +  + +  E   L  EM +   +  VVTF V++D LC
Sbjct: 400 VMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLC 459

Query: 181 KNGKMDEASRLLDLMIQH-GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           KN  + +A      M    G++P+A  Y  ++DG C   +V  A  LF  M   G     
Sbjct: 460 KNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDR 519

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ L++G  K   +  AL+L  +M   G+K D++ + +L  G  + +Q+++A    +E
Sbjct: 520 TAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEE 579

Query: 300 M 300
           M
Sbjct: 580 M 580



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 96/176 (54%), Gaps = 7/176 (3%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           VTF  LI GLC    + +A   F ++   FG +P+   YT +++GLC+ +    A  LFE
Sbjct: 449 VTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFE 508

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           +MA    + G+V  P+   YT+++DG  K+G + +A  L  +M +  +K +++ YTS++ 
Sbjct: 509 QMA----QEGLV--PDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVW 562

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           GF       +A+    EM+ + + P+ V    ++ +  + G +DEA  L   +++H
Sbjct: 563 GFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKH 618


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 227/450 (50%), Gaps = 9/450 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTYTTLVNG 67
           V   +L+    P  VT+ +L+     E R+ +AA L  ++  R  GC P   TY  ++NG
Sbjct: 218 VYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVING 277

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           L R      A  L + M           + +  T+  +I G    G V+KA  L L+M++
Sbjct: 278 LARKGELEKAAQLVDRMRMSK-------KASAFTFNPLITGYFARGSVEKAGALQLEMEN 330

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + I P VVTY ++I G   + +   A+  F+EM   G+ P+++T+N +++  CK G + E
Sbjct: 331 EGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKE 390

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  L   + + G+ P   TYN LLDG+C  G +  A+     M   GC+  V +Y+IL+N
Sbjct: 391 ALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMN 450

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G  K + +      + EMLSKG++PD   +NT       +     AF+L + M   G+++
Sbjct: 451 GSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISS 510

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           DT TY  F+DGLCK+G + +A  L+  +     + D   Y  LI   C+ GRL  A ++F
Sbjct: 511 DTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIF 570

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    L P+ VTY++ I   C  G +  A   F  M E  V PN +T+++LI    R+
Sbjct: 571 DGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRM 630

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVD 457
              +   +  H+M E  + P+    ++++D
Sbjct: 631 GRTNLAYQHFHEMLERGLSPNKYTYTLLID 660



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 220/433 (50%), Gaps = 5/433 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           +++ L  E+R  +  +++ ++   G EP + TY TL++   R      A  L  EM    
Sbjct: 202 VLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARP 261

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           G     C P+ VTY  +I+GL ++G ++KA +L+ +M+  + K +  T+  +I G+    
Sbjct: 262 GG----CLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARG 316

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
              +A  L +EM ++G+ P VVT+N I+  + ++G ++ A      M   G+ PD  TYN
Sbjct: 317 SVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYN 376

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           +L++G+C  G +  A  LF  ++  G   +V +Y+IL++GYC+  ++E A     EM+ +
Sbjct: 377 SLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQ 436

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G +PDV  +  L  G  ++  +    + FDEM   G+  D + Y T I      G   EA
Sbjct: 437 GCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEA 496

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            +L   +       D   YN  +DGLCKSG L+ A  L+  +    L P+ +TY+ +I  
Sbjct: 497 FQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHA 556

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C  G++ +ARD+F  M  + + P+ +T+ + I  + R            KM E  V P+
Sbjct: 557 HCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPN 616

Query: 449 ASIVSIVVDLLAK 461
               ++++  L +
Sbjct: 617 EVTYNVLIHALCR 629



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 206/403 (51%), Gaps = 6/403 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            A TF  LI G  A   + +A AL  ++   G  P V TY T+++G+ R+ +   A   F
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM       G++  P+ +TY ++I+G CK G + +A  L   +K   + P+V+TY  ++
Sbjct: 361 VEMR----AMGLL--PDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILL 414

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C   D  EA+R   EM++QG QP+V T+ ++M+   K   +       D M+  G++
Sbjct: 415 DGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQ 474

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD F YNT +    + G  + A +L   M S G      +Y+I ++G CK+  ++ A  L
Sbjct: 475 PDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVL 534

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +M+S G++PD + +  L     E  ++  A  +FD M  +G+     TY  FI   C+
Sbjct: 535 WMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCR 594

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G +  A   F  +       +   YN LI  LC+ GR  +A + F  +    L PN  T
Sbjct: 595 RGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYT 654

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           Y+++I G C +G  ++A  L+ +M ++ + P+  T + L +GF
Sbjct: 655 YTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 166/334 (49%), Gaps = 6/334 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T+ SLI G C    + EA  LF  L+  G  P V TY  L++G CR      A   
Sbjct: 370 PDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRF 429

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM          C+P+  TYT +++G  K   +   +E   +M  K ++P+   Y + 
Sbjct: 430 KQEMVEQG------CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR 483

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I         +EA +L   M+ +G+  + VT+N+ +D LCK+G + +A  L   M+  G+
Sbjct: 484 ISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGL 543

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD  TY  L+   C  GR+  A+++F  M   G   +  +Y++ I+ YC+   +  A  
Sbjct: 544 QPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYG 603

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            + +ML +G++P+ V +N L   L  + +   A++ F EM   G++ + +TY   IDG C
Sbjct: 604 WFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNC 663

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           K G   EA+ L+  +       D   +N+L  G 
Sbjct: 664 KEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 151/326 (46%), Gaps = 30/326 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     + G + ++   P  +T+  L+ G C    + EA     ++   GC+PDV TY
Sbjct: 386 GNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTY 445

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGE---------------FGVVCEP--------- 97
           T L+NG  +  +  +    F+EM +   +                G   E          
Sbjct: 446 TILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMIS 505

Query: 98  -----NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                +TVTY   +DGLCK G +  A  L ++M    ++P+ +TYT +I   C      E
Sbjct: 506 RGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLRE 565

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+ +F  M+  G+ P+ VT+ V +   C+ G +  A      M++ GVRP+  TYN L+ 
Sbjct: 566 ARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIH 625

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C  GR N A + F  M   G     ++Y++LI+G CK    E A+ LYSEM   GI P
Sbjct: 626 ALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHP 685

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFD 298
           D   HN LF G F+  Q + A +  +
Sbjct: 686 DHCTHNALFKG-FDEGQSKHAIQYME 710



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 152/295 (51%), Gaps = 5/295 (1%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F EM   GV P +   N+++  L    + D+   +   M+Q G+ P   TYNTLLD F  
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 217 TGRVNHAKELFVSMESM--GCKHTVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPD 273
            GRV+ A +L   ME+   GC  +  +Y+++ING  +  E+E A  L   M +SK  K  
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK--KAS 301

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
               N L  G F    VE+A  L  EM+  G+     TY T I G+ ++G +  A   F 
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R +    D+  YNSLI+G CK+G L+ AL LF  L    L P+V+TY+I++ G C  G
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLG 421

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +++AR    +M E    P+V T+ +L+ G  ++   + V E   +M    + PD
Sbjct: 422 DLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPD 476



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 169/341 (49%), Gaps = 3/341 (0%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M    + P +     V+R       W++ + ++ EM+  G++P++VT+N ++D   + G
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245

Query: 184 KMDEASRLLDLMIQH--GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           ++D+A++LL  M     G  P   TYN +++G    G +  A +L   M  M  K + F+
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFT 304

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI GY     +E A +L  EM ++GI P VV +NT+  G+F    VE A   F EM+
Sbjct: 305 FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMR 364

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  TY + I+G CK G + EA+ LF  L+       +  YN L+DG C+ G LE
Sbjct: 365 AMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLE 424

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A    + +      P+V TY+I++ G      +   R+ F +M    + P+   ++  I
Sbjct: 425 EARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRI 484

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
              + +   S+  +L   M    +  D    +I +D L K+
Sbjct: 485 SAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKS 525



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 110/223 (49%), Gaps = 7/223 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G  S  F +   ++    + D VT+   + GLC    + +A  L+ K+   G +PD  T
Sbjct: 490 LGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCIT 549

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++  C       A ++F+ M            P+ VTYT  I   C+ G +  A  
Sbjct: 550 YTCLIHAHCERGRLREARDIFDGMLVSG------LPPSAVTYTVFIHAYCRRGNLYSAYG 603

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M ++ ++PN VTY  +I   C     N A + F EM+++G+ PN  T+ +++D  C
Sbjct: 604 WFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNC 663

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           K G  +EA RL   M QHG+ PD  T+N L  GF   G+  HA
Sbjct: 664 KEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFD-EGQSKHA 705



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 25/123 (20%), Positives = 60/123 (48%), Gaps = 7/123 (5%)

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           +F+ RA N      C +    + L  FR +    + P +   ++++  L ++ + D  R 
Sbjct: 163 KFNTRARNP-APSTCST----LCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRS 217

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM--KEINVMPDASIVSIVVDL 458
           ++ +M +  + P+++T++ L+  F R     +  +LL +M  +    +P     ++V++ 
Sbjct: 218 VYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVING 277

Query: 459 LAK 461
           LA+
Sbjct: 278 LAR 280


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/475 (31%), Positives = 237/475 (49%), Gaps = 21/475 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G   + ++ K   +P+ VT+ +LI   C + ++ EA AL   + V G   ++ +Y
Sbjct: 221 GDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISY 280

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++NGLC          L EEM  G G       P+ VTY T+++G CKEG + +   L
Sbjct: 281 NSVINGLCGKGRMSEVGELVEEM-RGKG-----LVPDEVTYNTLVNGFCKEGNLHQGLVL 334

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  K + PNVVTYT++I   C A + + A  +F +M  +G++PN  T+  ++D  C+
Sbjct: 335 LSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQ 394

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G M+EA ++L  MI  G  P   TYN L+ G+C  GRV  A  +   M   G    V S
Sbjct: 395 KGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVS 454

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I G+C+ +E+  A  +  EM+ KG+ PD V +++L  GL    ++  AF LF EM 
Sbjct: 455 YSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMM 514

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G+  D  TY + I+  C +G + +A+ L   +       D   Y+ LI+GL K  R +
Sbjct: 515 RRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTK 574

Query: 362 IALELFRSLPCGVLVPNVVTYSIMI---------------GGLCNDGQMDKARDLFLDME 406
           +A  L   L     VP+ VTY+ +I                G C  G M++A  +F  M 
Sbjct: 575 VAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTML 634

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +    PN   ++++I G  R     K   L  +++  +       V  +V  LA+
Sbjct: 635 QRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAR 689



 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 244/461 (52%), Gaps = 27/461 (5%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++++  +P+  T+  +I+G+ ++  + +      K+   G  P+V TY TL++  C+   
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A+ L   MA G    GV    N ++Y ++I+GLC +G + +  EL+ +M+ K + P+
Sbjct: 258 VKEAMALLRAMAVG----GVAA--NLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPD 311

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            VTY +++ GFC   + ++   L  EM+ +G+ PNVVT+  +++ +CK G +  A  + D
Sbjct: 312 EVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G+RP+  TY TL+DGFC  G +N A ++   M   G   +V +Y+ L++GYC   
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG 431

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++ A+ +   M+ +G+ PDVV ++T+  G     ++ +AF++ +EM   GV  DT TY 
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYS 491

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I GLC    +VEA +LF  +       D   Y SLI+  C  G L  AL L   +   
Sbjct: 492 SLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI------------ 421
             +P+ VTYS++I GL    +   A+ L L +     VP+ +T++ LI            
Sbjct: 552 GFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVE 611

Query: 422 ---RGFIR---INEPSKVIELLHKMKEINVMPDASIVSIVV 456
              +GF     +NE  +V +    M + N  P+A+I ++++
Sbjct: 612 GLVKGFCMKGLMNEADRVFK---TMLQRNHKPNAAIYNLMI 649



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 199/393 (50%), Gaps = 11/393 (2%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF-----V 115
           +  +V  L R      AL L   +AN +G       P  ++Y  ++D L +         
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLH-LANRHG-----FAPTVLSYNAVLDALLRRSSSNHRDY 188

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A+ +   M    + PNV TY  +IRG     D  +      +M  +G+ PNVVT+N +
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D  CK  K+ EA  LL  M   GV  +  +YN++++G C  GR++   EL   M   G 
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                +Y+ L+NG+CK   +   L L SEM+ KG+ P+VV + TL   + +   + RA +
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +FD+M+  G+  +  TY T IDG C+ G + EA ++   + +      +  YN+L+ G C
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             GR++ A+ + R +    L P+VV+YS +I G C + ++ KA  +  +M E  V+P+ +
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           T+  LI+G     +  +  +L  +M    + PD
Sbjct: 489 TYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPD 521



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 204/408 (50%), Gaps = 17/408 (4%)

Query: 68  LCRTSHTIVALNLFEEMANGNGE---------FGVVCEP--NTVTYTTIIDGLCKEGFVD 116
           L RT+H++ A +L   + +  G          F +   P  ++  +  ++  L + GFV 
Sbjct: 91  LYRTAHSLAA-DLAATLPDPTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVP 149

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVI-----RGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
           KA  LL         P V++Y +V+     R     +D+++A+R+F +M+  GV PNV T
Sbjct: 150 KALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYT 209

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +NVI+  +   G +++    +  M + G+ P+  TYNTL+D  C   +V  A  L  +M 
Sbjct: 210 YNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMA 269

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G    + SY+ +ING C    +     L  EM  KG+ PD V +NTL  G  +   + 
Sbjct: 270 VGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLH 329

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           +   L  EM   G++ +  TY T I+ +CK G +  AVE+F  +R+     + R Y +LI
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG C+ G +  A ++   +      P+VVTY+ ++ G C  G++ +A  +   M E  + 
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           P+V+++  +I GF R  E  K  ++  +M E  V+PD    S ++  L
Sbjct: 450 PDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGL 497



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 197/422 (46%), Gaps = 46/422 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G V+L  ++    +P+ VT+T+LI  +C    +  A  +F ++RV G  P+  TY
Sbjct: 326 GNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTY 385

Query: 62  TTLVNGLCRTSHTIVALNLFEEM---------------ANGNGEFGVVCE---------- 96
           TTL++G C+      A  +  EM                +G    G V E          
Sbjct: 386 TTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE 445

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P+ V+Y+T+I G C+E  + KA ++  +M +K + P+ VTY+S+I+G C  +   E
Sbjct: 446 RGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVE 505

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  LF EMM +G+ P+ VT+  +++  C +G++ +A RL D M+Q G  PD  TY+ L++
Sbjct: 506 AFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLIN 565

Query: 213 GFCLTGRVNHAKELFVSM---ESM-----------GCKHTVF-SYSILINGYCKNKEIEG 257
           G     R   AK L + +   ES+            C +  F S   L+ G+C    +  
Sbjct: 566 GLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNE 625

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  ++  ML +  KP+  I+N +  G      V +A+ L+ E++ +  A  T      + 
Sbjct: 626 ADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVK 685

Query: 318 GLCKNGYIVEAVELFHTLRILKCEF-DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            L + G   E   L   + +  C   D +    L++   K G ++  L +   +    L+
Sbjct: 686 ALAREGMNDELSRLLQNI-LRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLL 744

Query: 377 PN 378
           P+
Sbjct: 745 PD 746



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 159/364 (43%), Gaps = 93/364 (25%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++  + VL  ++ S F+P  VT+ +L+ G C   R+ EA  +   +   G  PDV +Y
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +T++ G CR      A  + EEM     E GV+  P+TVTY+++I GLC +  + +A +L
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMV----EKGVL--PDTVTYSSLIQGLCLQQKLVEAFDL 509

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL-- 179
             +M  + + P+ VTYTS+I  +C   + ++A RL  EM+ +G  P+ VT++V+++ L  
Sbjct: 510 FREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNK 569

Query: 180 ------------------------------------------------CKNGKMDEASRL 191
                                                           C  G M+EA R+
Sbjct: 570 KARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRV 629

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME--SMGCKHTVFSYS------ 243
              M+Q   +P+A  YN ++ G    G V+ A  L++ +E  S  C HTV   +      
Sbjct: 630 FKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFAC-HTVAVIALVKALA 688

Query: 244 ----------------------------ILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
                                       +L+    K   ++  L++ +EM   G+ PD  
Sbjct: 689 REGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGG 748

Query: 276 IHNT 279
           IH++
Sbjct: 749 IHSS 752



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 5/212 (2%)

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI-----HQVERAFKLFDEMQRNGVAADT 309
           +  AL+L       G  P V+ +N +   L           + A ++F +M RNGV+ + 
Sbjct: 148 VPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNV 207

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +TY   I G+   G + + +     +       ++  YN+LID  CK  +++ A+ L R+
Sbjct: 208 YTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRA 267

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +  G +  N+++Y+ +I GLC  G+M +  +L  +M    +VP+ +T++ L+ GF +   
Sbjct: 268 MAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGN 327

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             + + LL +M    + P+    + +++ + K
Sbjct: 328 LHQGLVLLSEMVGKGLSPNVVTYTTLINCMCK 359


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 145/403 (35%), Positives = 223/403 (55%), Gaps = 6/403 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + D  +FT LI   C  SR+  A AL  K+   G  P + T  +L+NG C+ +    A++
Sbjct: 111 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 170

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L + M      FG V  PN V Y T+I+GLCK   ++ A E+   M+ K I+ + VTY +
Sbjct: 171 LVDSMDG----FGFV--PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G   +  W +A RL  +M+ + + PNV+ F  ++D   K G + EA  L   MI+  
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V P+ FTYN+L++GFC+ G +  AK +F  M S GC   V +Y+ LI G+CK+K +E  +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+ EM  +G+  D   +NTL  G  +  ++  A K+F+ M   GV+ D  TY   +D L
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C NG I +A+ +   L+  + + DI  YN +I GLC++ +L+ A  LFRSL    + P+ 
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           + Y  MI GLC  G   +A  L   M+E+  +P+   +D  +R
Sbjct: 465 IAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 227/445 (51%), Gaps = 6/445 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F +   +L+S   P  V FT ++  +   ++      L+ K+   G   D++++T L++
Sbjct: 63  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
             CR S   +AL L  +M     + G    P+ VT  ++++G C+     +A  L+  M 
Sbjct: 123 CFCRCSRLSLALALLGKMM----KLGF--RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
                PNVV Y +VI G C  +D N A  +F  M  +G++ + VT+N ++  L  +G+  
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A+RLL  M++  + P+   +  L+D F   G +  A+ L+  M        VF+Y+ LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           NG+C +  +  A  ++  M+SKG  PDVV +NTL  G  +  +VE   KLF EM   G+ 
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D +TY T I G C+ G +  A ++F+ +       DI  YN L+D LC +G++E AL +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
              L    +  +++TY+I+I GLC   ++ +A  LF  +    V P+ I +  +I G  R
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476

Query: 427 INEPSKVIELLHKMKEINVMPDASI 451
                +  +L  +MKE   MP   I
Sbjct: 477 KGLQREADKLCRRMKEDGFMPSERI 501



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 197/371 (53%), Gaps = 6/371 (1%)

Query: 12  GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
           G+++K  F P  VT  SL+ G C  +R  EA +L   +  FG  P+V  Y T++NGLC+ 
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                AL +F  M       G+    + VTY T+I GL   G    A  LL  M  + I 
Sbjct: 198 RDLNNALEVFYCMEKK----GI--RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID 251

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           PNV+ +T++I  F    +  EA+ L+ EM+ + V PNV T+N +++  C +G + +A  +
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            DLM+  G  PD  TYNTL+ GFC + RV    +LF  M   G     F+Y+ LI+GYC+
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
             ++  A  +++ M+  G+ PD+V +N L   L    ++E+A  + +++Q++ +  D  T
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   I GLC+   + EA  LF +L     + D  AY ++I GLC+ G    A +L R + 
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491

Query: 372 CGVLVPNVVTY 382
               +P+   Y
Sbjct: 492 EDGFMPSERIY 502



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 171/347 (49%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  L  +M      P++V +T V+        ++    L+ +M + G+  ++ +F ++
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +   C+  ++  A  LL  M++ G RP   T  +LL+GFC   R   A  L  SM+  G 
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V  Y+ +ING CKN+++  AL ++  M  KGI+ D V +NTL  GL    +   A +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M +  +  +   +   ID   K G ++EA  L+  +       ++  YNSLI+G C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             G L  A  +F  +      P+VVTY+ +I G C   +++    LF +M    +V +  
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T++ LI G+ +  + +   ++ ++M +  V PD    +I++D L  N
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 144/277 (51%), Gaps = 6/277 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR +    +L  ++K    P+ + FT+LI     E  ++EA  L+ ++      P+VFTY
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NG C       A  +F+ M +        C P+ VTY T+I G CK   V+   +L
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKG------CFPDVVTYNTLITGFCKSKRVEDGMKL 346

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + +  +  TY ++I G+C A   N A+++F  M+D GV P++VT+N+++D LC 
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NGK+++A  +++ + +  +  D  TYN ++ G C T ++  A  LF S+   G K    +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           Y  +I+G C+      A  L   M   G  P   I++
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 155/313 (49%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y   +R   +   +++A  LF EM+     P++V F  ++  + K  K D    L   M 
Sbjct: 47  YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+  D +++  L+  FC   R++ A  L   M  +G + ++ +   L+NG+C+    +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+SL   M   G  P+VVI+NT+  GL +   +  A ++F  M++ G+ AD  TY T I
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            GL  +G   +A  L   +   K + ++  + +LID   K G L  A  L++ +    +V
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PNV TY+ +I G C  G +  A+ +F  M      P+V+T++ LI GF +       ++L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346

Query: 437 LHKMKEINVMPDA 449
             +M    ++ DA
Sbjct: 347 FCEMTYQGLVGDA 359



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 99/208 (47%)

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           + + A SL+ EML     P +V    +   + ++++ +    L+ +M+  G++ D +++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I   C+   +  A+ L   +  L     I    SL++G C+  R + A+ L  S+   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
             VPNVV Y+ +I GLC +  ++ A ++F  ME+  +  + +T++ LI G       +  
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
             LL  M +  + P+    + ++D   K
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVK 266



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 6/141 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++    V  R++    +PD VT+  L+  LC   +I +A  +   L+    + D+ TY
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ GLCRT     A  LF  +       GV  +P+ + Y T+I GLC++G   +A +L
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRK----GV--KPDAIAYITMISGLCRKGLQREADKL 486

Query: 122 LLQMKDKNIKPNVVTYTSVIR 142
             +MK+    P+   Y   +R
Sbjct: 487 CRRMKEDGFMPSERIYDETLR 507


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 142/428 (33%), Positives = 226/428 (52%), Gaps = 7/428 (1%)

Query: 14  ILKSCFTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++ SC  P + +T+  LI GLC   ++ +AA +   +   GC+P+  T+  L+ G CR  
Sbjct: 358 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREH 417

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           +   AL L +EM   N        P+ V+Y  +I+GLC    +  A +LL +M    +KP
Sbjct: 418 NMGRALELLDEMEKRN------LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 471

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           NVV Y+ +I  +       EA+RL   M   GV P++  +N I+  L K GKM+EAS  L
Sbjct: 472 NVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 531

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             +   G++PDA T+   + G+  TG++  A + F  M   G       Y++LING+ K 
Sbjct: 532 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 591

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +  ALS++  + + G+ PDV   +    GL +  +V+ A K+F E++  G+  D +TY
Sbjct: 592 GNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            + I G CK G + +A EL   + +     +I  YN+L+DGLCKSG ++ A +LF  +P 
Sbjct: 652 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 711

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L P+ VTYS MI G C    + +A  LF +M    V P+   ++ L+ G  +  +  K
Sbjct: 712 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 771

Query: 433 VIELLHKM 440
            + L  +M
Sbjct: 772 AMNLFREM 779



 Score =  244 bits (622), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 231/473 (48%), Gaps = 41/473 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD--------------------- 57
             P+  T+T +  GLC   R+ EA   F +++  G +PD                     
Sbjct: 294 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL 353

Query: 58  --------------VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
                         + TY  L++GLC+      A  + + M        + C+PN+ T+ 
Sbjct: 354 RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT------LGCKPNSRTFC 407

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
            +I+G C+E  + +A ELL +M+ +N+ P+ V+Y ++I G C+ KD + A +L  +M   
Sbjct: 408 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 467

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G++PNVV +++++      G+++EA RLLD M   GV PD F YN ++      G++  A
Sbjct: 468 GLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
               + ++  G K    ++   I GY K  ++  A   + EML  G+ P+  ++  L  G
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            F+   +  A  +F  +   GV  D  T   FI GL KNG + EA+++F  L+      D
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y+SLI G CK G +E A EL   +    + PN+  Y+ ++ GLC  G + +AR LF 
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            M E  + P+ +T+  +I G+ +    ++   L H+M    V P + + + +V
Sbjct: 708 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 760



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 234/455 (51%), Gaps = 7/455 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++      L  I      PDAVTF + I G     ++ EAA  F ++   G  P+   Y
Sbjct: 522 GKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLY 581

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+NG  +  + + AL++F  +       GV+  P+  T +  I GL K G V +A ++
Sbjct: 582 TVLINGHFKAGNLMEALSIFRRLH----ALGVL--PDVQTCSAFIHGLLKNGRVQEALKV 635

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++K+K + P+V TY+S+I GFC   +  +A  L  EM  +G+ PN+  +N ++D LCK
Sbjct: 636 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 695

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G +  A +L D M + G+ PD+ TY+T++DG+C +  V  A  LF  M S G +   F 
Sbjct: 696 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 755

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G CK  ++E A++L+ EML KG    +   NTL  G  +  +++ A +LF EM 
Sbjct: 756 YNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMI 814

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +  D  TY T ID  CK G + EA  LF  ++      D   Y SL+ G  K G+  
Sbjct: 815 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 874

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
               LF  +    + P+ VTY ++I   C +  + +A  L  ++    ++      D+LI
Sbjct: 875 EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 934

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
               +  + ++  +LL +M E+ + P  +  + +V
Sbjct: 935 TALCKREDLTEASKLLDEMGELGLKPSLAACNTLV 969



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 239/462 (51%), Gaps = 7/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  +  S   PD   + ++I  L    ++ EA+    +++  G +PD  T+
Sbjct: 487 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 546

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              + G  +T     A   F+EM     + G++  PN   YT +I+G  K G + +A  +
Sbjct: 547 GAFILGYSKTGKMTEAAKYFDEML----DHGLM--PNNPLYTVLINGHFKAGNLMEALSI 600

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++    + P+V T ++ I G        EA ++F E+ ++G+ P+V T++ ++   CK
Sbjct: 601 FRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 660

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++++A  L D M   G+ P+ F YN L+DG C +G +  A++LF  M   G +    +
Sbjct: 661 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 720

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+GYCK++ +  A SL+ EM SKG++P   ++N L  G  +   +E+A  LF EM 
Sbjct: 721 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 780

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G A  T ++ T IDG CK+  I EA +LF  +   +   D   Y ++ID  CK+G++E
Sbjct: 781 QKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 839

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF+ +    L+ + VTY+ ++ G    GQ  +   LF  M    V P+ +T+ ++I
Sbjct: 840 EANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 899

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
               + +   +  +L  ++    ++   +I  +++  L K E
Sbjct: 900 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 941



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 235/476 (49%), Gaps = 41/476 (8%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T+T L+  LC    +  A  +  ++   G  P+ F Y+ ++ G+C+      A+ L 
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M    GE G+V  PNT TYT I  GLC+   +++AK    +M+   +KP+    +++I
Sbjct: 287 RSM----GEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GF    D +E  R+   M+  G+  N++T+NV++  LCK GKM++A+ +L  M+  G +
Sbjct: 341 DGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCK 400

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P++ T+  L++G+C    +  A EL   ME      +  SY  +ING C  K++  A  L
Sbjct: 401 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 460

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW----------- 310
             +M   G+KP+VV+++ L +      ++E A +L D M  +GVA D +           
Sbjct: 461 LEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 520

Query: 311 ------------------------TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                                   T+  FI G  K G + EA + F  +       +   
Sbjct: 521 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 580

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y  LI+G  K+G L  AL +FR L    ++P+V T S  I GL  +G++ +A  +F +++
Sbjct: 581 YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 640

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           E  +VP+V T+  LI GF +  E  K  EL  +M    + P+  I + +VD L K+
Sbjct: 641 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 696



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 205/417 (49%), Gaps = 6/417 (1%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           DV+TYT LV  LC+T     A  +  EM     E G+   PN   Y+ +I+G+C+ G +D
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEM----DEKGL--NPNEFIYSLVIEGMCQVGDID 280

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A EL   M +K + PN  TYT +  G C AK  NEAK  F EM   G++P+    + ++
Sbjct: 281 EAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D   + G +DE  R+ D+M+  G+  +  TYN L+ G C  G++  A E+   M ++GCK
Sbjct: 341 DGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCK 400

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               ++ +LI GYC+   +  AL L  EM  + + P  V +  +  GL     +  A KL
Sbjct: 401 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 460

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            ++M  +G+  +   Y   I      G I EA  L   +       DI  YN++I  L K
Sbjct: 461 LEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 520

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +G++E A      +    L P+ VT+   I G    G+M +A   F +M ++ ++PN   
Sbjct: 521 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 580

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           + +LI G  +     + + +  ++  + V+PD    S  +  L KN     +L  F+
Sbjct: 581 YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS 637



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 215/422 (50%), Gaps = 7/422 (1%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G +     +  R+      PD  T ++ I GL    R+ EA  +F++L+  G  PDVFTY
Sbjct: 592  GNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++L++G C+      A  L +EM       G+   PN   Y  ++DGLCK G + +A++L
Sbjct: 652  SSLISGFCKQGEVEKAFELHDEMCLK----GIA--PNIFIYNALVDGLCKSGDIQRARKL 705

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
               M +K ++P+ VTY+++I G+C +++  EA  LF EM  +GVQP+   +N ++   CK
Sbjct: 706  FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 765

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             G M++A  L   M+Q G      ++NTL+DG+C + ++  A +LF  M +        +
Sbjct: 766  EGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVT 824

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            Y+ +I+ +CK  ++E A  L+ EM  + +  D V + +L  G  ++ Q    F LF++M 
Sbjct: 825  YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 884

Query: 302  RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              GV  D  TY   I   CK   +VEA +L   +           ++ LI  LCK   L 
Sbjct: 885  AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 944

Query: 362  IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             A +L   +    L P++   + ++      G+MD+A  +F  ++   +VP+  T   L+
Sbjct: 945  EASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 1004

Query: 422  RG 423
             G
Sbjct: 1005 NG 1006



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 205/400 (51%), Gaps = 7/400 (1%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV     V   + +    PD  T++SLI G C +  + +A  L  ++ + G  P++F Y
Sbjct: 627  GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 686

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              LV+GLC++     A  LF+ M     E G+  EP++VTY+T+IDG CK   V +A  L
Sbjct: 687  NALVDGLCKSGDIQRARKLFDGMP----EKGL--EPDSVTYSTMIDGYCKSENVAEAFSL 740

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +M  K ++P+   Y +++ G C   D  +A  LF EM+ +G     ++FN ++D  CK
Sbjct: 741  FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCK 799

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            + K+ EAS+L   MI   + PD  TY T++D  C  G++  A  LF  M+         +
Sbjct: 800  SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 859

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            Y+ L+ GY K  +     +L+ +M++KG+KPD V +  +     +   +  AFKL DE+ 
Sbjct: 860  YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 919

Query: 302  RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              G+      +   I  LCK   + EA +L   +  L  +  + A N+L+    ++G+++
Sbjct: 920  GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMD 979

Query: 362  IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
             A  +F  +    LVP+  T   ++ G  ND   + AR+L
Sbjct: 980  EATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 1019



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 174/364 (47%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           + V +  +ID   + G +D+A  +    K+ +I  +++   S+++            +++
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVY 216

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M+D  +  +V T+  ++  LCK G +  A R+L  M + G+ P+ F Y+ +++G C  
Sbjct: 217 NGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV 276

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G ++ A EL  SM   G     ++Y+I+  G C+ K +  A   + EM   G+KPD    
Sbjct: 277 GDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNAC 336

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           + L  G      ++   ++ D M   G+  +  TY   I GLCK G + +A E+   +  
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
           L C+ + R +  LI+G C+   +  ALEL   +    LVP+ V+Y  MI GLC+   +  
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 456

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  L   M  + + PNV+ + +LI  +       +   LL  M    V PD    + ++ 
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 516

Query: 458 LLAK 461
            L+K
Sbjct: 517 CLSK 520



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 125/243 (51%), Gaps = 6/243 (2%)

Query: 24   VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
            ++F +LI G C   +I EA+ LF ++      PD  TYTT+++  C+      A  LF+E
Sbjct: 788  LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 847

Query: 84   MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
            M   N         +TVTYT+++ G  K G   +   L  +M  K +KP+ VTY  VI  
Sbjct: 848  MQERN------LIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYA 901

Query: 144  FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
             C   +  EA +L  E++ +G+       ++++  LCK   + EAS+LLD M + G++P 
Sbjct: 902  HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 961

Query: 204  AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
                NTL+  F   G+++ A  +F  ++S+G      +   L+NG   + + E A +L  
Sbjct: 962  LAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIK 1021

Query: 264  EML 266
            +++
Sbjct: 1022 QLV 1024



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 17/249 (6%)

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG-- 283
            + S   MG    + S+SIL    C ++    A  + ++M+        ++ + LF    
Sbjct: 93  FYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRN 152

Query: 284 -------LFEI--------HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
                  +F+I          ++ A  +F   + + +        + +  L K G +   
Sbjct: 153 YGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELF 212

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            ++++ +   K  FD+  Y  L+  LCK+G L  A  +   +    L PN   YS++I G
Sbjct: 213 WKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEG 272

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +C  G +D+A +L   M E  +VPN  T+ ++  G  R    ++      +M++  + PD
Sbjct: 273 MCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 332

Query: 449 ASIVSIVVD 457
            +  S ++D
Sbjct: 333 YNACSALID 341



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 6/161 (3%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +G+ S  F +  +++     PD VT+  +I   C E  ++EA  L  ++   G       
Sbjct: 870  LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 929

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            +  L+  LC+      A  L +EM    GE G+  +P+     T++    + G +D+A  
Sbjct: 930  HDLLITALCKREDLTEASKLLDEM----GELGL--KPSLAACNTLVRSFHEAGKMDEATR 983

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
            +   +K   + P+  T   ++ G     D  +A+ L  +++
Sbjct: 984  VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 229/436 (52%), Gaps = 16/436 (3%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K    P+  T+  L+K LC   R+  A  LF ++   GC PD  TYTT+V+ LC+     
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A     E+A   G F    +P+   Y  +IDG+CKEG ++ A +LL +M D  + PNVV
Sbjct: 232 DA----RELA---GRF----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVV 280

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +Y+ +I   C + +   A  LF +M  +G   N+ TF  ++      GK+ EA  L  LM
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           IQ G  P+   YNTL+ G C  G +  A ++   M+  GC   V +YSILI+G+ K+ ++
Sbjct: 341 IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
            GA   ++ M+S G +P+VV +  +   L +    ++A  L ++M   G   +T T+ TF
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTF 460

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I GLC NG +  A++L   ++   C  +I  YN L+D L +  + E A  LF+ +    L
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSK 432
            PN+VTY+ ++ G    G M +A  LF         P+ IT++ +I  +    ++   ++
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580

Query: 433 VIELLHKMKEINVMPD 448
           ++E +  MKE +  PD
Sbjct: 581 LVERVSSMKEWH--PD 594



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 207/415 (49%), Gaps = 9/415 (2%)

Query: 12  GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
            R L   F P    + +LI G+C E RI  A  L  ++   G +P+V +Y+ ++N LC +
Sbjct: 233 ARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVS 292

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
            +  +A  LF +M      F   C+ N  T+T +I G    G + +A +L   M     +
Sbjct: 293 GNVELAFALFAQM------FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           PNVV Y ++I G C      EA ++  +M   G  PNV T+++++D   K+G +  AS  
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET 406

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            + MI HG RP+  TY  ++D  C     + A  L   M   GC     +++  I G C 
Sbjct: 407 WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCG 466

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           N  +E A+ L   M   G  P++  +N L   LF +++ E AF LF E++   +  +  T
Sbjct: 467 NGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSL 370
           Y T + G  + G + EA++LF    +     D   YN++I   CK G+++IA +L  R  
Sbjct: 527 YNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVS 586

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AVVPNVITFDMLIRGF 424
                 P+++TY+ +I G CN   +++A   FLD   N  + PN  T++ L+R F
Sbjct: 587 SMKEWHPDIITYTSLIWGACNWMNIEEAM-AFLDKAINQGICPNFATWNALVRCF 640



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 198/386 (51%), Gaps = 7/386 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +LG ++ +   P+ V+++ +I  LC    +  A ALF ++ + GC+ ++ T+
Sbjct: 258 GRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTF 317

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ G         AL+L++ M          CEPN V Y T+I GLC  G +++A ++
Sbjct: 318 TPLIKGCFMRGKLYEALDLWKLMIQDG------CEPNVVAYNTLIHGLCSNGSLEEALQV 371

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM+     PNV TY+ +I GF  + D   A   +  M+  G +PNVVT+  ++D LCK
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N   D+A+ L++ M   G  P+  T+NT + G C  GRV  A +L   M+  GC   + +
Sbjct: 432 NSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITT 491

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++   +  + E A  L+ E+ ++ ++P++V +NT+  G      +  A +LF +  
Sbjct: 492 YNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKAL 551

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGRL 360
             G A D+ TY T I   CK G +  A +L   +  +K    DI  Y SLI G C    +
Sbjct: 552 VRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNI 611

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMI 386
           E A+          + PN  T++ ++
Sbjct: 612 EEAMAFLDKAINQGICPNFATWNALV 637



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 191/387 (49%), Gaps = 10/387 (2%)

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           L  F  +AN N       +    TY  +I+ L +E  +D  + +L QMK   I      +
Sbjct: 58  LGFFSAIANSNA-----FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G+       +A ++F  + + G +P V  +N ++D L    K    + L   M +
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ P+ FTYN LL   C   RV+ A +LFV M + GC     +Y+ +++  CK  +I+ 
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L         KP V ++N L  G+ +  ++E A KL  EM  NGV  +  +Y   I+
Sbjct: 233 ARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC +G +  A  LF  + +  C+ +I  +  LI G    G+L  AL+L++ +      P
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           NVV Y+ +I GLC++G +++A  +   M+ +  +PNV T+ +LI GF +  +     E  
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEI 464
           ++M      P+    + +VD+L KN +
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSM 434



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 184/393 (46%), Gaps = 40/393 (10%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           +  II+G  + G  ++A ++  ++ +   KP V  Y  ++        +     L+  M 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
             G+ PNV T+N+++  LCKN ++D A +L   M   G  PDA TY T++   C  G+++
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A+EL         K +V  Y+ LI+G CK   IE A+ L  EM+  G+ P+VV ++ + 
Sbjct: 232 DARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L     VE AF LF +M   G  A+  T+   I G    G + EA++L+  +    CE
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG------------- 388
            ++ AYN+LI GLC +G LE AL++   +     +PNV TYSI+I G             
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET 406

Query: 389 ----------------------LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
                                 LC +   D+A  L   M      PN +TF+  I+G   
Sbjct: 407 WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCG 466

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
                  ++LL +M+    +P+ +  + ++D L
Sbjct: 467 NGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 152/304 (50%), Gaps = 7/304 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  ++ +S   P+  T++ LI G      ++ A+  + ++   GC P+V TY
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +V+ LC+ S    A +L E+M          C PNT+T+ T I GLC  G V+ A +L
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEG------CTPNTMTFNTFIKGLCGNGRVEWAMKL 476

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+     PN+ TY  ++        + EA  LF E+  + +QPN+VT+N ++    +
Sbjct: 477 LERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSR 536

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT-VF 240
            G M EA +L    +  G  PD+ TYNT++  +C  G+V  A +L   + SM   H  + 
Sbjct: 537 AGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDII 596

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI G C    IE A++   + +++GI P+    N L    F+         + D++
Sbjct: 597 TYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDI 656

Query: 301 QRNG 304
            R G
Sbjct: 657 LRKG 660



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M +    F +   I      P+ VT+ +++ G      + EA  LF K  V G  PD  T
Sbjct: 502 MNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++  C+     +A  L E +++   E+     P+ +TYT++I G C    +++A  
Sbjct: 562 YNTMIHAYCKQGKVKIAAQLVERVSSMK-EW----HPDIITYTSLIWGACNWMNIEEAMA 616

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGF 144
            L +  ++ I PN  T+ +++R F
Sbjct: 617 FLDKAINQGICPNFATWNALVRCF 640


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 140/421 (33%), Positives = 217/421 (51%), Gaps = 6/421 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTF +L+K LC   ++  A  +  ++   G  PD  T+TTL+ G         AL +
Sbjct: 183 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV 242

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M     E G  C P  VT   +I+G CK G V+ A   + Q      +P+ +TY + 
Sbjct: 243 KARML----EMG--CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTF 296

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C       A ++   M+ +G  P+V T+N++++ LCKNG+++EA  +L+ M++ G 
Sbjct: 297 VNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGC 356

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T+NTL+   C   R+  A +L   +   G    V++++ILIN  CK  + + AL 
Sbjct: 357 LPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALR 416

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM S G  PD V +NTL   L  + ++ +A  L  EM+  G    T TY T IDGLC
Sbjct: 417 LFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLC 476

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   I EA E+F  + +     +   +N+LIDGLCK  R++ A +L   +    L PN +
Sbjct: 477 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNI 536

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++   C  G + KA D+   M  N    +V+T+  LI G  +       ++LL  M
Sbjct: 537 TYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM 596

Query: 441 K 441
           +
Sbjct: 597 R 597



 Score =  244 bits (622), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 218/425 (51%), Gaps = 6/425 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  R+L+   +P  VT   LI G C   R+ +A     +    G EPD  TY
Sbjct: 234 GSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITY 293

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T VNGLC+  H   AL + + M     +      P+  TY  +++ LCK G +++AK +
Sbjct: 294 NTFVNGLCQNGHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGI 347

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM ++   P++ T+ ++I   C      EA  L  ++  +G+ P+V TFN++++ LCK
Sbjct: 348 LNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCK 407

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A RL + M   G  PD  TYNTL+D  C  G++  A +L   MES GC  +  +
Sbjct: 408 VGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVT 467

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G CK   IE A  ++ +M  +GI  + +  NTL  GL +  +++ A +L  +M 
Sbjct: 468 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMI 527

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY + +   CK G I +A ++  T+     E D+  Y +LI+GLCK+GR +
Sbjct: 528 SEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQ 587

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL+L R +    +      Y+ +I  L        A +LF +M E    P+  T+ ++ 
Sbjct: 588 VALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVF 647

Query: 422 RGFIR 426
           RG  R
Sbjct: 648 RGLCR 652



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/455 (30%), Positives = 227/455 (49%), Gaps = 7/455 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV      + + + + F PD +T+ + + GLC    +  A  +   +   G +PDVFT
Sbjct: 268 LGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFT 327

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +VN LC+      A  +  +M     E G  C P+  T+ T+I  LC    +++A +
Sbjct: 328 YNIVVNCLCKNGQLEEAKGILNQMV----ERG--CLPDITTFNTLIVALCSGNRLEEALD 381

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  Q+  K + P+V T+  +I   C   D   A RLF EM   G  P+ VT+N ++D LC
Sbjct: 382 LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GK+ +A  LL  M   G      TYNT++DG C   R+  A+E+F  M+  G      
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 501

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LI+G CK+K I+ A  L S+M+S+G++P+ + +N++     +   +++A  +   M
Sbjct: 502 TFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D  TY T I+GLCK G    A++L   +RI       +AYN +I  L +    
Sbjct: 562 TANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNT 621

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLC-NDGQMDKARDLFLDMEENAVVPNVITFDM 419
             A+ LFR +      P+  TY I+  GLC   G + +A D  L+M +   +P   +F M
Sbjct: 622 RDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRM 681

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           L  G + +      I  +  + E   + D+ + +I
Sbjct: 682 LAEGLLNLGMDDYFIRAIEIIIEKADLGDSDVSAI 716



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 210/398 (52%), Gaps = 6/398 (1%)

Query: 51  VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC 110
           +FG + D   Y  L+N L   S   +   ++ EM    GE G+  +P+ VT+ T++  LC
Sbjct: 143 LFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEM----GERGI--KPDVVTFNTLMKALC 196

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           +   V  A  +L +M    + P+  T+T++++GF        A R+   M++ G  P  V
Sbjct: 197 RAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKV 256

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T NV+++  CK G++++A   +   I +G  PD  TYNT ++G C  G V HA ++   M
Sbjct: 257 TVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G    VF+Y+I++N  CKN ++E A  + ++M+ +G  PD+   NTL V L   +++
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E A  L  ++   G++ D +T+   I+ LCK G    A+ LF  ++   C  D   YN+L
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTL 436

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ID LC  G+L  AL+L + +       + VTY+ +I GLC   ++++A ++F  M+   +
Sbjct: 437 IDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 496

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             N ITF+ LI G  +        +L+ +M    + P+
Sbjct: 497 SRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPN 534



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 181/350 (51%), Gaps = 3/350 (0%)

Query: 114 FVDKAKELLLQMKDK--NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
           FVD A +L+L   D    I+ + V Y  ++            + ++ EM ++G++P+VVT
Sbjct: 129 FVD-AVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVT 187

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           FN +M  LC+  ++  A  +L+ M   GV PD  T+ TL+ GF   G +  A  +   M 
Sbjct: 188 FNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARML 247

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
            MGC  T  + ++LINGYCK   +E AL    + ++ G +PD + +NT   GL +   V 
Sbjct: 248 EMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVG 307

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A K+ D M + G   D +TY   ++ LCKNG + EA  + + +    C  DI  +N+LI
Sbjct: 308 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI 367

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
             LC   RLE AL+L R +    L P+V T++I+I  LC  G    A  LF +M+ +   
Sbjct: 368 VALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCT 427

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           P+ +T++ LI     + +  K ++LL +M+           + ++D L K
Sbjct: 428 PDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCK 477



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 209/445 (46%), Gaps = 11/445 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V H   V+  +++    PD  T+  ++  LC   ++ EA  +  ++   GC PD+ T+
Sbjct: 304 GHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTF 363

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  LC  +    AL+L  ++            P+  T+  +I+ LCK G    A  L
Sbjct: 364 NTLIVALCSGNRLEEALDLARQVTLKG------LSPDVYTFNILINALCKVGDPQLALRL 417

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK     P+ VTY ++I   C      +A  L  EM   G   + VT+N I+D LCK
Sbjct: 418 FEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCK 477

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA  + D M   G+  +A T+NTL+DG C   R++ A +L   M S G +    +
Sbjct: 478 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNIT 537

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++  YCK  +I+ A  +   M + G + DVV + TL  GL +  + + A KL   M+
Sbjct: 538 YNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMR 597

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK-SGRL 360
             G+ A    Y   I  L +     +A+ LF  +  +    D   Y  +  GLC+  G +
Sbjct: 598 IKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSI 657

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK-ARDLFLDMEENAVVPNVITFDM 419
             A +    +     +P   ++ ++  GL N G  D   R + + +E+  +  + ++   
Sbjct: 658 REAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDSDVS--- 714

Query: 420 LIRGFIRINEPSKVIELLHKMKEIN 444
            IRG+++I +    +    ++ +IN
Sbjct: 715 AIRGYLKIRKFYDALATFGRLLKIN 739


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 156/490 (31%), Positives = 240/490 (48%), Gaps = 50/490 (10%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V+GR+  S       T+   I+GLC   R+ EA  +   L   G   DV TY TLV GLC
Sbjct: 237 VIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLC 296

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +    +      EEM N   EFG V  P+    + ++DGL K+G +  A +L+ ++K   
Sbjct: 297 K----VEEFEAGEEMMNEMIEFGFV--PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P++  Y ++I   C     +EA+ LF  M  +G+ PN VT+++++D  CK GK+D A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             L  M + G++   + Y++L+ G C  G++  AK LF  M + G K  V  Y+ LI+GY
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE------------------ 291
           CK  E+  A  LY EM  KGI P+      L  GL   +++                   
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530

Query: 292 -----------------RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
                            RAF+L DEM   G+  DT+TYR  I GLC  G + EA E  + 
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 335 LR--------ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           L+        I  C  ++  Y +LI+GLCK G ++ A  L R +     +PN  TY+  +
Sbjct: 591 LQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 650

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L ++G ++KA  L  D+     + N +T+++LIRGF ++    +  E+L  M +  + 
Sbjct: 651 DYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGIS 709

Query: 447 PDASIVSIVV 456
           PD    S ++
Sbjct: 710 PDCISYSTII 719



 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 145/412 (35%), Positives = 217/412 (52%), Gaps = 17/412 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT++ LI   C   ++  A     K+   G +  V+ Y++L++G C+      A +L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           F+EM ANG        +PN V YT++I G CKEG +  A  L  +M  K I PN  T+T+
Sbjct: 448 FDEMIANG-------LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C+A    EA +LF EM++  V PN VT+NV+++  CK G    A  LLD M++ G
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--------ESMGCKHTVFSYSILINGYCK 251
           + PD +TY  L+ G C TGRV+ A+E    +        E  GC   V +Y+ LING CK
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCK 620

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              ++ A  L  EML+    P+   +      L     +E+A +L D +   G  A+T T
Sbjct: 621 IGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVT 679

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   I G CK G I EA E+   +       D  +Y+++I   C+ G L+ A++L+ S+ 
Sbjct: 680 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML 739

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
              + P+ V Y+ +I G C  G++ KA +L  DM    V PN  T++ LI G
Sbjct: 740 NRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 240/496 (48%), Gaps = 49/496 (9%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G VV+  ++     P   T + ++ GL    +   A  LF ++   G  PDV+ YT +V 
Sbjct: 164 GLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVR 223

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            LC     I A  +   M +        C+ +  TY   I GLCK   V +A E+   + 
Sbjct: 224 SLCELKDFIRAREVIGRMESSG------CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLS 277

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD------------------------ 162
            K ++ +V TY +++ G C  +++   + +  EM++                        
Sbjct: 278 YKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIG 337

Query: 163 -----------QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
                       GV P++  +N +++ +CK+GK+DEA  L + M   G+ P+  TY+ L+
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           D FC  G+++ A      M  +G K TV+ YS LI+G+CK  ++  A SL+ EM++ G+K
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P+VVI+ +L  G  +  ++  AF+L+ EM   G++ +T+T+   I GLC    + EA +L
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +       +   YN LI+G CK G    A EL   +    LVP+  TY  +I GLC+
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 392 DGQMDKARDLFLDM--------EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            G++ +AR+   D+        E    +PNV+T+  LI G  +I    K   L  +M   
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLAS 637

Query: 444 NVMPDASIVSIVVDLL 459
           N +P+ +  +  +D L
Sbjct: 638 NSLPNQNTYACFLDYL 653



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 212/438 (48%), Gaps = 15/438 (3%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P     ++L+ GL  +  I  A  L  K++ FG  P +F Y  L+N +C+      A 
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +LF  M +  G F     PN VTY+ +ID  CK G +D A   L +M +  IK  V  Y+
Sbjct: 376 SLFNNMGH-KGLF-----PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYS 429

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I G C       AK LF EM+  G++PNVV +  ++   CK G++  A RL   M   
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P+ +T+  L+ G C   R+  A +LF  M          +Y++LI G+CK      A
Sbjct: 490 GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR--------NGVAADTW 310
             L  EM+ KG+ PD   +  L  GL    +V  A +  +++Q          G   +  
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVV 609

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY   I+GLCK G + +A  L   +       +   Y   +D L   G +E A++L   L
Sbjct: 610 TYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL 669

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
             G L  N VTY+I+I G C  G++ +A ++ ++M ++ + P+ I++  +I  + R  + 
Sbjct: 670 LEGFLA-NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDL 728

Query: 431 SKVIELLHKMKEINVMPD 448
            + I+L   M    V PD
Sbjct: 729 KEAIKLWESMLNRGVNPD 746



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 180/339 (53%), Gaps = 15/339 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + + F +   +     +P+  TFT+LI GLC  +R+ EA  LF ++  +   P+  TY
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G C+  +T+ A  L +EM     E G+V  P+T TY  +I GLC  G V +A+E 
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMV----EKGLV--PDTYTYRPLISGLCSTGRVSEAREF 587

Query: 122 LLQMKDKNIK--------PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
           +  ++ +  K        PNVVTYT++I G C     ++A+ L  EM+     PN  T+ 
Sbjct: 588 MNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 647

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
             +D L   G +++A +L D++++ G   +  TYN L+ GFC  GR+  A E+ V+M   
Sbjct: 648 CFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDS 706

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G      SYS +I  YC+  +++ A+ L+  ML++G+ PD V +N L  G     ++ +A
Sbjct: 707 GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKA 766

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           F+L D+M R GV  +  TY + I G C    +    + F
Sbjct: 767 FELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 213/433 (49%), Gaps = 6/433 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           + C     + F  LI+      R ++   +   +   G  P + T + ++NGL R     
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           +AL+LF+E+ +          P+   YT ++  LC+     +A+E++ +M+      +V 
Sbjct: 198 MALHLFDEIVSSG------LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY   IRG C  +   EA  +   +  +G++ +V T+  ++  LCK  + +    +++ M
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           I+ G  P     + L+DG    G +  A +L   ++  G   ++F Y+ LIN  CK+ ++
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A SL++ M  KG+ P+ V ++ L     +  +++ A     +M   G+ A  + Y + 
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I G CK G +  A  LF  +     + ++  Y SLI G CK G L  A  L+  +    +
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN  T++ +I GLC+  +M +A  LF +M E  V+PN +T+++LI G  +     +  E
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 436 LLHKMKEINVMPD 448
           LL +M E  ++PD
Sbjct: 552 LLDEMVEKGLVPD 564



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 21/273 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR--------VFG 53
           G     F +L  +++    PD  T+  LI GLC+  R+ EA      L+        + G
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEG 603

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
           C P+V TYT L+NGLC+      A  L  EM   N        PN  TY   +D L  EG
Sbjct: 604 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL------PNQNTYACFLDYLTSEG 657

Query: 114 FVDKAKELLLQMKD---KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
            ++KA    +Q+ D   +    N VTY  +IRGFC      EA  + + M+D G+ P+ +
Sbjct: 658 NIEKA----IQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 713

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           +++ I+ E C+ G + EA +L + M+  GV PD   YN L+ G C+TG +  A EL   M
Sbjct: 714 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM 773

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
              G K    +Y+ LI+G C    +      +S
Sbjct: 774 MRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 156/457 (34%), Positives = 240/457 (52%), Gaps = 8/457 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++    +L R+     +PD VT+ SLI G      + E   L  ++R  GC PDV TY
Sbjct: 208 GDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTY 267

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LVN  C+      A + F EM       GV+   N VT++T +D  CK G V +A +L
Sbjct: 268 NALVNCFCKFGRMERAYSYFAEMKRE----GVM--ANVVTFSTFVDAFCKNGMVREAMKL 321

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM+ K +KPN VTYT ++ G C A   ++A  L  EM+ QGV  NVVT+ V++D LCK
Sbjct: 322 FAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCK 381

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA  +  LM + G+R +   Y TL+ G  +      A  L   M+  G +  V  
Sbjct: 382 EGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSL 441

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LI G C  ++++ A SL ++M   G+KP+ VI+  +    F+  +   A  L  +M 
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMM 501

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   +  TY   +DGLCK G I EA+  F+ +  L  E +++AY +L+DGLCK+GRL+
Sbjct: 502 DSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLD 561

Query: 362 IALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A+ L   +   G+ + NVV  S+M G L   G +  A  L   M  + +  ++  +   
Sbjct: 562 KAVLLLDEMIDKGMSLDNVVCTSLMDGHL-KQGNLQDAFALKAKMINSGLQLDLYGYTCF 620

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + GF  +N   +  E+L +M E  + PDA + + +++
Sbjct: 621 VWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 224/429 (52%), Gaps = 8/429 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+ +    P+  TF  +I  LC E  + EA AL  +++  GC PDV TY +L++G  +  
Sbjct: 184 RLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCG 243

Query: 73  HTIVALNLFEEMANGNGEF-GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                    EE+    GE  G  C P+ VTY  +++  CK G +++A     +MK + + 
Sbjct: 244 E-------LEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVM 296

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
            NVVT+++ +  FC      EA +LF +M  +G++PN VT+  ++D  CK G++D+A  L
Sbjct: 297 ANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVL 356

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            + M+Q GV  +  TY  L+DG C  G+V  A+++F  ME  G +     Y+ LI+G+  
Sbjct: 357 TNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFV 416

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            K  E ALSL SEM  KG++ DV ++  L  GL  + +++ A  L ++M   G+  +   
Sbjct: 417 YKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVI 476

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   +D   K     EA+ L   +       +I  Y +L+DGLCK+G ++ A+  F  + 
Sbjct: 477 YTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV 536

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              L PNV  Y+ ++ GLC +G++DKA  L  +M +  +  + +    L+ G ++     
Sbjct: 537 DLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQ 596

Query: 432 KVIELLHKM 440
               L  KM
Sbjct: 597 DAFALKAKM 605



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 221/456 (48%), Gaps = 10/456 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    + L R+ +    P+  T   ++  L  E     A  LF +L      P+VFT+
Sbjct: 142 GLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTF 197

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++ LC+      A  L   M        + C P+ VTY ++IDG  K G +++ ++L
Sbjct: 198 NIMIDFLCKEGDLAEARALLARMK------AIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+    +P+VVTY +++  FC       A   F EM  +GV  NVVTF+  +D  CK
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG + EA +L   M   G++P+  TY  L+DG C  GR++ A  L   M   G    V +
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++L++G CK  ++  A  ++  M   GI+ + +++ TL  G F     ERA  L  EM+
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMK 431

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D   Y   I GLC    + EA  L + +     + +   Y +++D   K+ +  
Sbjct: 432 DKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKES 491

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+ L + +      PN+VTY  ++ GLC  G +D+A   F  M +  + PNV  +  L+
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALV 551

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            G  +     K + LL +M +  +  D  + + ++D
Sbjct: 552 DGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMD 587



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 216/432 (50%), Gaps = 13/432 (3%)

Query: 33  LCAESRIMEAAAL-FTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF 91
           L A+  +++ A L   ++R     P+  T   ++  L R   + +A  LFE++       
Sbjct: 137 LLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP------ 190

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                PN  T+  +ID LCKEG + +A+ LL +MK     P+VVTY S+I G+    +  
Sbjct: 191 ----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELE 246

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           E ++L  EM   G +P+VVT+N +++  CK G+M+ A      M + GV  +  T++T +
Sbjct: 247 EVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFV 306

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           D FC  G V  A +LF  M   G K    +Y+ L++G CK   ++ AL L +EM+ +G+ 
Sbjct: 307 DAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVP 366

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
            +VV +  L  GL +  +V  A  +F  M+R G+ A+   Y T I G         A+ L
Sbjct: 367 LNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSL 426

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLC 390
              ++    E D+  Y +LI GLC   +L+ A  L   +  CG L PN V Y+ ++    
Sbjct: 427 LSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG-LKPNNVIYTNIMDACF 485

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
              +  +A  L   M ++   PN++T+  L+ G  +     + I   +KM ++ + P+  
Sbjct: 486 KARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQ 545

Query: 451 IVSIVVDLLAKN 462
             + +VD L KN
Sbjct: 546 AYTALVDGLCKN 557



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 187/397 (47%), Gaps = 41/397 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+   +     + +     + VTF++ +   C    + EA  LF ++R+ G +P+  TY
Sbjct: 278 GRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE- 120
           T LV+G C+      AL L  EM             N VTYT ++DGLCKEG V +A++ 
Sbjct: 338 TCLVDGTCKAGRLDDALVLTNEMVQQGVPL------NVVTYTVLVDGLCKEGKVAEAEDV 391

Query: 121 ----------------------------------LLLQMKDKNIKPNVVTYTSVIRGFCY 146
                                             LL +MKDK ++ +V  Y ++I G C 
Sbjct: 392 FRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCN 451

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
            +  +EAK L  +M + G++PN V +  IMD   K  K  EA  LL  M+  G RP+  T
Sbjct: 452 LQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVT 511

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  L+DG C  G ++ A   F  M  +G +  V +Y+ L++G CKN  ++ A+ L  EM+
Sbjct: 512 YCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMI 571

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            KG+  D V+  +L  G  +   ++ AF L  +M  +G+  D + Y  F+ G C    I 
Sbjct: 572 DKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQ 631

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           EA E+   +       D   YN LI+   K G +E A
Sbjct: 632 EAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEA 668



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 205/464 (44%), Gaps = 50/464 (10%)

Query: 33  LCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFG 92
           LC  + I+  A LF   R           + L   L    H  +A +L + +       G
Sbjct: 73  LCLAAHILARARLFPHSR-----------SLLSRLLAPGHHPHLAASLVDLLHRAALALG 121

Query: 93  VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                      T++  L   G +D A   L ++++  + PN  T   ++   C A++   
Sbjct: 122 PRRSALPSVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHIL--LCLARE--R 177

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           +  L   + +Q   PNV TFN+++D LCK G + EA  LL  M   G  PD  TYN+L+D
Sbjct: 178 SSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLID 237

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+   G +   ++L   M   GC+  V +Y+ L+N +CK   +E A S ++EM  +G+  
Sbjct: 238 GYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMA 297

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +VV  +T      +   V  A KLF +M+  G+  +  TY   +DG CK G + +A+ L 
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLT 357

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN-------------- 378
           + +       ++  Y  L+DGLCK G++  A ++FR +    +  N              
Sbjct: 358 NEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVY 417

Query: 379 ---------------------VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
                                V  Y  +I GLCN  ++D+A+ L   M+E  + PN + +
Sbjct: 418 KNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIY 477

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             ++    +  + S+ I LL KM +    P+      +VD L K
Sbjct: 478 TNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCK 521



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 168/330 (50%), Gaps = 6/330 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+    V+   +++     + VT+T L+ GLC E ++ EA  +F  +   G   +   Y
Sbjct: 348 GRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLY 407

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++G     ++  AL+L  EM +   E  V        Y  +I GLC    +D+AK L
Sbjct: 408 TTLIHGHFVYKNSERALSLLSEMKDKGMELDVS------LYGALIWGLCNLQKLDEAKSL 461

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  +KPN V YT+++     A+  +EA  L  +MMD G +PN+VT+  ++D LCK
Sbjct: 462 LNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCK 521

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +DEA    + M+  G+ P+   Y  L+DG C  GR++ A  L   M   G       
Sbjct: 522 AGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVV 581

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            + L++G+ K   ++ A +L ++M++ G++ D+  +     G   ++ ++ A ++  EM 
Sbjct: 582 CTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMI 641

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
            NG+  D   Y   I+   K G + EA  L
Sbjct: 642 ENGITPDAVVYNCLINKCQKLGNMEEAAIL 671



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 58/127 (45%)

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           +N +ID LCK G L  A  L   +      P+VVTY+ +I G    G++++   L  +M 
Sbjct: 197 FNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMR 256

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
                P+V+T++ L+  F +     +      +MK   VM +    S  VD   KN +  
Sbjct: 257 GCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVR 316

Query: 467 NSLPSFT 473
            ++  F 
Sbjct: 317 EAMKLFA 323


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 231/444 (52%), Gaps = 6/444 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++L S   P  +TF ++I  LC + R+ EA  + + +  +   P+ FTYT+L+ G CR  
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           +  +A  +F+ M          C+PN+VTY+T+I+GLC EG +++A ++L +M  K I+P
Sbjct: 252 NLDLAFAMFDRMVKDG------CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            V TYT  +   C A   +EA  L  +M  +G  PN+ TF  ++  L ++GK + A  L 
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  G+ P   TYN L++  C+ GR   A  +F  M S G   +  +Y+ +I  +C  
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +I+ A+ ++ +ML  G  P+V+ +NTL  G  +   +  A +L + M+ NG+  D WTY
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I G  + G +  A  LF+ +       +   Y ++IDG     +++ AL LF  +  
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
              +P+  TY++MI G      + +A +    M +  ++PNVIT+   I G  R      
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605

Query: 433 VIELLHKMKEINVMPDASIVSIVV 456
             ++ H+M++ N  P+    S ++
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLI 629



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 227/457 (49%), Gaps = 8/457 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV    +++  I +    P+A T+TSLI G C    +  A A+F ++   GC+P+  TY
Sbjct: 216 GRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTY 275

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NGLC       A+++ EEM     + G+  EP   TYT  +  LC  G   +A EL
Sbjct: 276 STLINGLCSEGRLEEAMDMLEEMV----QKGI--EPTVYTYTIPLVSLCDAGCSSEAVEL 329

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK +   PN+ T+T++I G      +  A  L+ +M+  G+ P  VT+N ++++LC 
Sbjct: 330 LGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCV 389

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ + A  +   M+ HG  P   TYN ++  FCL G +  A  +F  M   G    V +
Sbjct: 390 EGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVIT 449

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI GYCK   +  A+ L   M   G+KPD   +  L  G     ++E A  LF  M 
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G++ +  TY   IDG      + +A+ LF  +         + YN +I G  K+  + 
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A      +    L+PNV+TY+  I GLC +G+   A  +F +ME+    PN+ T+  LI
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLI 629

Query: 422 RGFIRIN--EPSKVIELLHKMKEINVMPDASIVSIVV 456
            G  +    E +++  LL ++      P+    + +V
Sbjct: 630 YGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 229/454 (50%), Gaps = 43/454 (9%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRI--------------------------- 39
            F +  R++K    P++VT+++LI GLC+E R+                           
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 40  --------MEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF 91
                    EA  L  K++  GC P++ T+T L++GL R     +A+ L+ +M       
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD---- 371

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
           G+V  P TVTY  +I+ LC EG  + A  +   M      P+  TY  +I+ FC   D  
Sbjct: 372 GLV--PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQ 429

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A  +F +M+  G  PNV+T+N ++   CK G ++ A RLL++M  +G++PDA+TY  L+
Sbjct: 430 KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            GF   G++ HA  LF  M   G      +Y+ +I+GY    +++ AL+L+ +M+  G  
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P    +N +  G  + + +  A     +M + G+  +  TY +FIDGLC+NG    A ++
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA--LELFRSLPCGVLVPNVVTYSIMIGGL 389
           FH +       ++  Y+SLI GLC+ GR E A    L   L      PNV TY+ ++ GL
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           C +G+  +A  L + M++  + P+   +  L+ G
Sbjct: 670 CGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 212/407 (52%), Gaps = 7/407 (1%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           ++TTL+  L +     +A +++ +M N     G+   P+ +T+ T+I+ LCK+G V +AK
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNS----GI--RPSLLTFNTMINILCKKGRVQEAK 222

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            ++  +   +  PN  TYTS+I G C   + + A  +F  M+  G  PN VT++ +++ L
Sbjct: 223 LIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C  G+++EA  +L+ M+Q G+ P  +TY   L   C  G  + A EL   M+  GC   +
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +++ LI+G  ++ + E A+ LY +ML+ G+ P  V +N L   L    + E AF +F  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M  +G    T TY   I   C  G I +A+ +F  +       ++  YN+LI G CK G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  A+ L   +    L P+  TY+ +I G    G+++ A  LF  M E+ + PN +T+  
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK-NEIS 465
           +I G+  + +    + L  KM E   +P +   ++++   +K N IS
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 210/438 (47%), Gaps = 6/438 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           +FT+L+  L     +  A  ++ K+   G  P + T+ T++N LC+      A  +   +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                 F     PN  TYT++I G C+   +D A  +  +M      PN VTY+++I G 
Sbjct: 229 ------FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C      EA  +  EM+ +G++P V T+ + +  LC  G   EA  LL  M + G  P+ 
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            T+  L+ G    G+   A  L+  M + G   T  +Y+ LIN  C     E A +++  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           MLS G  P    +N +      +  +++A  +FD+M + G + +  TY T I G CK G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A+ L   ++    + D   Y  LI G  + G+LE A  LF  +    + PN VTY+ 
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I G  N  ++D A  LF  M E+  +P+  T++++I GF + N  S+      KM +  
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 445 VMPDASIVSIVVDLLAKN 462
           ++P+    +  +D L +N
Sbjct: 583 LLPNVITYTSFIDGLCRN 600



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 187/387 (48%), Gaps = 8/387 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +    V+  ++LK+  +P+ +T+ +LI G C +  +  A  L   ++  G +PD +T
Sbjct: 425 MGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWT 484

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G  R      A +LF  M     E G+   PN VTYT IIDG      VD A  
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMM----EHGI--SPNHVTYTAIIDGYFNLAKVDDALA 538

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M +    P+  TY  +I GF      +EA+    +M+ QG+ PNV+T+   +D LC
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK--ELFVSMESMGCKHT 238
           +NG+   A ++   M +    P+ +TY++L+ G C  GR   A+   L   +   GC+  
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +Y+ L+ G C       A  L   M  KG++P   I+  L +G  +  +VE A  +F 
Sbjct: 659 VDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFY 718

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M   G       Y+  I  LCK  +I EA  +F T+       D  A+  L+DGL K G
Sbjct: 719 SMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEG 778

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIM 385
             ++ L+L   +       N  TY ++
Sbjct: 779 ETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 115/223 (51%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           +T+ S++ L+    K   ++ A  +Y +ML+ GI+P ++  NT+   L +  +V+ A  +
Sbjct: 165 YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLI 224

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
              + R     + +TY + I G C+N  +  A  +F  +    C+ +   Y++LI+GLC 
Sbjct: 225 MSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCS 284

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            GRLE A+++   +    + P V TY+I +  LC+ G   +A +L   M++   VPN+ T
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           F  LI G  R  +    I L HKM    ++P     + +++ L
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 247/488 (50%), Gaps = 42/488 (8%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           +V G++  +   PD  T   + K  C + R+ +A     ++   G E ++  Y  +++  
Sbjct: 204 MVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCY 263

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C    T  A  + E +            PN VTYT ++ G CK+G +++A+ ++ +MK+ 
Sbjct: 264 CGMGWTEDARRILESLQRKG------LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKET 317

Query: 129 -NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
            +I  + V Y  +I G+C     ++A R+  EM D G+  N+  +N +++ LCK G+M+E
Sbjct: 318 GDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEE 377

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
             ++L  M   G+RPD ++YNTL+DG+C  G +  A E+   M   G   T  +Y+ L+ 
Sbjct: 378 VQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLK 437

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+C    I+ AL L+  ML +G+ P+ +  +TL  GLF+  + E+A  L+ E    G+A 
Sbjct: 438 GFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAK 497

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA---- 363
           +  T+ T I+GLCK G + EA EL   ++ L+C  D   Y +L DG CK G+L  A    
Sbjct: 498 NVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLM 557

Query: 364 -----------LELFRSLPCGVLV--------------------PNVVTYSIMIGGLCND 392
                      +E+F S   G  +                    PN+VTY  +I G C +
Sbjct: 558 NKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKE 617

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G + +A +L+ +M  N + PNV     L+  F +  +  +   +L K+  I+++P  SI 
Sbjct: 618 GNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIS 677

Query: 453 SIVVDLLA 460
           +I +D ++
Sbjct: 678 TIEIDKIS 685



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 229/497 (46%), Gaps = 67/497 (13%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V +  +I G C   R+ +A  +  ++R  G   ++F Y T++NGLC+         + 
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM +      V   P+  +Y T+IDG C+EG + KA E+   M    +    +TY +++
Sbjct: 383 QEMED------VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPN--------------------------------- 168
           +GFC     ++A RL+  M+ +GV PN                                 
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLA 496

Query: 169 --VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
             V+TFN +++ LCK G+M EA  LLD M +    PD+ TY TL DG+C  G++  A  L
Sbjct: 497 KNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHL 556

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              ME +G   +V  ++  I G+   K+      ++SEM ++G+ P++V +  L  G  +
Sbjct: 557 MNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCK 616

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA---------VELFHTLRI 337
              +  A  L+ EM  NG+  + +     +    K G + EA         +++     I
Sbjct: 617 EGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSI 676

Query: 338 LKCEFDIRA-----------------YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
              E D  +                 +N +I GLCKSGR+  A  LF SL     +P+  
Sbjct: 677 STIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNF 736

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TYS +I G    G +D+A  L   M    + PN+IT++ LI G  +  + S+ + L +K+
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796

Query: 441 KEINVMPDASIVSIVVD 457
           +   + P+    + ++D
Sbjct: 797 QSKGISPNGITYNTLID 813



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 200/437 (45%), Gaps = 51/437 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +    L      + +TF ++I GLC   R+ EA  L  +++   C PD  TY
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL +G C+      A +L  +M +     G    P+   + + I G        K  ++
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEH----LGFA--PSVEMFNSFITGHFIAKQWHKVNDI 591

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + + PN+VTY ++I G+C   + +EA  L+ EM++ G+ PNV   + +M    K
Sbjct: 592 HSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYK 651

Query: 182 NGKMDEASRLLDLMIQHGVRPDA--------------------------FTYNTLLDGFC 215
            GK+DEA+ +L  ++   + P                              +N ++ G C
Sbjct: 652 EGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLC 711

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            +GR+  AK LF S+ +       F+YS LI+G   +  I+ A SL   MLS G+ P+++
Sbjct: 712 KSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNII 771

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N+L  GL +  ++ RA  LF+++Q  G++ +  TY T ID  CK G   EA +L    
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK- 830

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                             + + G +E A++L   +    + PN +TY  +I G    G M
Sbjct: 831 ------------------MVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNM 872

Query: 396 DKARDLFLDMEENAVVP 412
           ++   L+ +M    ++P
Sbjct: 873 EEISKLYDEMHIRGLLP 889



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 218/453 (48%), Gaps = 24/453 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP---------DVFTYTTLVNGLCRT 71
           P  V+   L+  L    R  +A AL + L     EP           FT++ +   L   
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHA-EPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 72  SHTIV-----ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           +H        ALN+F+ M        V C P+  +   +++ L + G    A  +  QM+
Sbjct: 157 AHADAGQLSSALNVFDGMGK------VGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
              + P+  T   + + +C      +A     EM   G++ N+V ++ +MD  C  G  +
Sbjct: 211 IAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTE 270

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTVFSYSIL 245
           +A R+L+ + + G+ P+  TY  L+ G+C  GR+  A+ +   M+  G       +Y ++
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           INGYC+   ++ A  + +EM   GI  ++ ++NT+  GL ++ ++E   K+  EM+  G+
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D ++Y T IDG C+ G + +A E+   +           YN+L+ G C    ++ AL 
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450

Query: 366 L-FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           L F  L  GV  PN ++ S ++ GL   G+ ++A +L+ +     +  NVITF+ +I G 
Sbjct: 451 LWFLMLKRGV-APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +I   ++  ELL +MKE+   PD+     + D
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFD 542



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 168/339 (49%), Gaps = 4/339 (1%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           + V++  ++R    A   + A  +F  M   G +P++ + N ++++L ++G    A+ + 
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M   GV PD FT   +   +C  GRV  A E    ME MG +  + +Y  +++ YC  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG-VAADTWT 311
              E A  +   +  KG+ P+VV +  L  G  +  ++E A ++  EM+  G +  D   
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   I+G C+ G + +A  + + +R      ++  YN++I+GLCK GR+E   ++ + + 
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+  +Y+ +I G C +G M KA ++   M  N +    +T++ L++GF  ++   
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLL---AKNEISLN 467
             + L   M +  V P+    S ++D L    K E +LN
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALN 485



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 145/312 (46%), Gaps = 39/312 (12%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +P+ VT+ +LI G C E  + EA  L+ ++   G  P+VF  + L++   +      A 
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659

Query: 79  NLFEEMANGNGEFG----------------VVCEPN----TVTYTTIIDGLCKEGFVDKA 118
            + +++ N +   G                 + + N     V +  II GLCK G +  A
Sbjct: 660 LVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           K L   +++K   P+  TY+S+I G   +   +EA  L   M+  G+ PN++T+N ++  
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK+GK+  A  L + +   G+ P+  TYNTL+D +C  G+   A +L   M        
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM-------- 831

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
                 +  GY     +E A+ L  +M+   + P+ + + TL  G  +   +E   KL+D
Sbjct: 832 ------VEEGY-----MEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 880

Query: 299 EMQRNGVAADTW 310
           EM   G+    W
Sbjct: 881 EMHIRGLLPTNW 892



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 120/243 (49%), Gaps = 3/243 (1%)

Query: 222 HAKELFVSMESMGCKHT--VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           HA+ LF  +  +    T    S+ +L+  +    ++  AL+++  M   G +P +   N 
Sbjct: 129 HAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNR 188

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L +      A  ++ +M+  GV  D +T        C++G + +AVE    +  + 
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            E ++ AY++++D  C  G  E A  +  SL    L PNVVTY++++ G C DG+M++A 
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 400 DLFLDMEENA-VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            +  +M+E   +V + + + M+I G+ +         + ++M++  +  +  + + +++ 
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 459 LAK 461
           L K
Sbjct: 369 LCK 371


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 231/444 (52%), Gaps = 6/444 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++L S   P  +TF ++I  LC + R+ EA  + + +  +   P+ FTYT+L+ G CR  
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           +  +A  +F+ M          C+PN+VTY+T+I+GLC EG +++A ++L +M  K I+P
Sbjct: 252 NLDLAFAMFDRMVKDG------CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            V TYT  +   C A   +EA  L  +M  +G  PN+ TF  ++  L ++GK + A  L 
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  G+ P   TYN L++  C+ GR   A  +F  M S G   +  +Y+ +I  +C  
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +I+ A+ ++ +ML  G  P+V+ +NTL  G  +   +  A +L + M+ NG+  D WTY
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I G  + G +  A  LF+ +       +   Y ++IDG     +++ AL LF  +  
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
              +P+  TY++MI G      + +A +    M +  ++PNVIT+   I G  R      
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605

Query: 433 VIELLHKMKEINVMPDASIVSIVV 456
             ++ H+M++ N  P+    S ++
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLI 629



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 227/457 (49%), Gaps = 8/457 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV    +++  I +    P+A T+TSLI G C    +  A A+F ++   GC+P+  TY
Sbjct: 216 GRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTY 275

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+NGLC       A+++ EEM     + G+  EP   TYT  +  LC  G   +A EL
Sbjct: 276 STLINGLCSEGRLEEAMDMLEEMV----QKGI--EPTVYTYTIPLVSLCDAGCSSEAVEL 329

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK +   PN+ T+T++I G      +  A  L+ +M+  G+ P  VT+N ++++LC 
Sbjct: 330 LGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCV 389

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ + A  +   M+ HG  P   TYN ++  FCL G +  A  +F  M   G    V +
Sbjct: 390 EGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVIT 449

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI GYCK   +  A+ L   M   G+KPD   +  L  G     ++E A  LF  M 
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G++ +  TY   IDG      + +A+ LF  +         + YN +I G  K+  + 
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A      +    L+PNV+TY+  I GLC +G+   A  +F +ME+    PN+ T+  LI
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLI 629

Query: 422 RGFIRIN--EPSKVIELLHKMKEINVMPDASIVSIVV 456
            G  +    E +++  LL ++      P+    + +V
Sbjct: 630 YGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 229/454 (50%), Gaps = 43/454 (9%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRI--------------------------- 39
            F +  R++K    P++VT+++LI GLC+E R+                           
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 40  --------MEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF 91
                    EA  L  K++  GC P++ T+T L++GL R     +A+ L+ +M       
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD---- 371

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
           G+V  P TVTY  +I+ LC EG  + A  +   M      P+  TY  +I+ FC   D  
Sbjct: 372 GLV--PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQ 429

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A  +F +M+  G  PNV+T+N ++   CK G ++ A RLL++M  +G++PDA+TY  L+
Sbjct: 430 KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            GF   G++ HA  LF  M   G      +Y+ +I+GY    +++ AL+L+ +M+  G  
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P    +N +  G  + + +  A     +M + G+  +  TY +FIDGLC+NG    A ++
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA--LELFRSLPCGVLVPNVVTYSIMIGGL 389
           FH +       ++  Y+SLI GLC+ GR E A    L   L      PNV TY+ ++ GL
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           C +G+  +A  L + M++  + P+   +  L+ G
Sbjct: 670 CGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 212/407 (52%), Gaps = 7/407 (1%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           ++TTL+  L +     +A +++ +M N     G+   P+ +T+ T+I+ LCK+G V +AK
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNS----GI--RPSLLTFNTMINILCKKGRVQEAK 222

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            ++  +   +  PN  TYTS+I G C   + + A  +F  M+  G  PN VT++ +++ L
Sbjct: 223 LIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C  G+++EA  +L+ M+Q G+ P  +TY   L   C  G  + A EL   M+  GC   +
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +++ LI+G  ++ + E A+ LY +ML+ G+ P  V +N L   L    + E AF +F  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M  +G    T TY   I   C  G I +A+ +F  +       ++  YN+LI G CK G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  A+ L   +    L P+  TY+ +I G    G+++ A  LF  M E+ + PN +T+  
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK-NEIS 465
           +I G+  + +    + L  KM E   +P +   ++++   +K N IS
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 210/438 (47%), Gaps = 6/438 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           +FT+L+  L     +  A  ++ K+   G  P + T+ T++N LC+      A  +   +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                 F     PN  TYT++I G C+   +D A  +  +M      PN VTY+++I G 
Sbjct: 229 ------FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C      EA  +  EM+ +G++P V T+ + +  LC  G   EA  LL  M + G  P+ 
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            T+  L+ G    G+   A  L+  M + G   T  +Y+ LIN  C     E A +++  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           MLS G  P    +N +      +  +++A  +FD+M + G + +  TY T I G CK G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A+ L   ++    + D   Y  LI G  + G+LE A  LF  +    + PN VTY+ 
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I G  N  ++D A  LF  M E+  +P+  T++++I GF + N  S+      KM +  
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 445 VMPDASIVSIVVDLLAKN 462
           ++P+    +  +D L +N
Sbjct: 583 LLPNVITYTSFIDGLCRN 600



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 186/387 (48%), Gaps = 8/387 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +    V+  ++LK+  +P+ +T+ +LI G C +  +  A  L   ++  G +PD +T
Sbjct: 425 MGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWT 484

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G  R      A +LF  M     E G+   PN VTYT IIDG      VD A  
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMM----EHGI--SPNHVTYTAIIDGYFNLAKVDDALA 538

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M +    P+  TY  +I GF      +EA+    +M+ QG+ PNV+T+   +D LC
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK--ELFVSMESMGCKHT 238
           +NG+   A ++   M +    P+ +TY++L+ G C  GR   A+   L   +   GC+  
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +Y+ L+ G C       A  L   M  KG++P   I+  L +G  +  +VE A  +F 
Sbjct: 659 VDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFY 718

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M   G       Y+  I  LCK  +I EA  +F T+       D   +  L+DGL K G
Sbjct: 719 SMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEG 778

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIM 385
             ++ L+L   +       N  TY ++
Sbjct: 779 ETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 115/223 (51%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           +T+ S++ L+    K   ++ A  +Y +ML+ GI+P ++  NT+   L +  +V+ A  +
Sbjct: 165 YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLI 224

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
              + R     + +TY + I G C+N  +  A  +F  +    C+ +   Y++LI+GLC 
Sbjct: 225 MSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCS 284

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            GRLE A+++   +    + P V TY+I +  LC+ G   +A +L   M++   VPN+ T
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           F  LI G  R  +    I L HKM    ++P     + +++ L
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 247/488 (50%), Gaps = 42/488 (8%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           +V G++  +   PD  T   + K  C + R+ +A     ++   G E ++  Y  +++  
Sbjct: 204 MVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCY 263

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C    T  A  + E +            PN VTYT ++ G CK+G +++A+ ++ +MK+ 
Sbjct: 264 CGMGWTEDARRILESLQRKG------LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKET 317

Query: 129 -NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
            +I  + V Y  +I G+C     ++A R+  EM D G+  N+  +N +++ LCK G+M+E
Sbjct: 318 GDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEE 377

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
             ++L  M   G+RPD ++YNTL+DG+C  G +  A E+   M   G   T  +Y+ L+ 
Sbjct: 378 VQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLK 437

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+C    I+ AL L+  ML +G+ P+ +  +TL  GLF+  + E+A  L+ E    G+A 
Sbjct: 438 GFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAK 497

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA---- 363
           +  T+ T I+GLCK G + EA EL   ++ L+C  D   Y +L DG CK G+L  A    
Sbjct: 498 NVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLM 557

Query: 364 -----------LELFRSLPCGVLV--------------------PNVVTYSIMIGGLCND 392
                      +E+F S   G  +                    PN+VTY  +I G C +
Sbjct: 558 NKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKE 617

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G + +A +L+ +M  N + PNV     L+  F +  +  +   +L K+  I+++P  SI 
Sbjct: 618 GNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIS 677

Query: 453 SIVVDLLA 460
           +I +D ++
Sbjct: 678 TIEIDKIS 685



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 228/460 (49%), Gaps = 32/460 (6%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +LK    P+ ++ ++L+ GL    +  +A  L+ +    G   +V T+ T++NGLC+   
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  L + M        + C P+++TY T+ DG CK G +  A  L+ +M+     P+
Sbjct: 515 MAEAEELLDRMKE------LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPS 568

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V  + S I G   AK W++   +  EM  +G+ PN+VT+  ++   CK G + EA  L  
Sbjct: 569 VEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM----GCK----------HTV 239
            M+ +G+ P+ F  + L+  F   G+V+ A  +   + ++    GC           H V
Sbjct: 629 EMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVV 688

Query: 240 FS------------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
            +            ++++I G CK+  I  A SL+  + +K   PD   +++L  G    
Sbjct: 689 DTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS 748

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             ++ AF L D M   G+  +  TY + I GLCK+G +  AV LF+ L+      +   Y
Sbjct: 749 GSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+LID  CK G+   A +L + +    + P V+TYSI+I GLC  G M++A  L   M E
Sbjct: 809 NTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIE 868

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           N V PN IT+  LI G+I+     ++ +L  +M    ++P
Sbjct: 869 NNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 229/497 (46%), Gaps = 67/497 (13%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V +  +I G C   R+ +A  +  ++R  G   ++F Y T++NGLC+         + 
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM +      V   P+  +Y T+IDG C+EG + KA E+   M    +    +TY +++
Sbjct: 383 QEMED------VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPN--------------------------------- 168
           +GFC     ++A RL+  M+ +GV PN                                 
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLA 496

Query: 169 --VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
             V+TFN +++ LCK G+M EA  LLD M +    PD+ TY TL DG+C  G++  A  L
Sbjct: 497 KNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHL 556

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              ME +G   +V  ++  I G+   K+      ++SEM ++G+ P++V +  L  G  +
Sbjct: 557 MNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCK 616

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA---------VELFHTLRI 337
              +  A  L+ EM  NG+  + +     +    K G + EA         +++     I
Sbjct: 617 EGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSI 676

Query: 338 LKCEFDIRA-----------------YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
              E D  +                 +N +I GLCKSGR+  A  LF SL     +P+  
Sbjct: 677 STIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNF 736

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TYS +I G    G +D+A  L   M    + PN+IT++ LI G  +  + S+ + L +K+
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796

Query: 441 KEINVMPDASIVSIVVD 457
           +   + P+    + ++D
Sbjct: 797 QSKGISPNGITYNTLID 813



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 218/453 (48%), Gaps = 24/453 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP---------DVFTYTTLVNGLCRT 71
           P  V+   L+  L    R  +A AL + L     EP           FT++ +   L   
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHA-EPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 72  SHTIV-----ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           +H        ALN+F+ M        V C P+  +   +++ L + G    A  +  QM+
Sbjct: 157 AHADAGQLSSALNVFDGMGK------VGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
              + P+  T   + + +C      +A     EM   G++ N+V ++ +MD  C  G  +
Sbjct: 211 IAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTE 270

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTVFSYSIL 245
           +A R+L+ + + G+ P+  TY  L+ G+C  GR+  A+ +   M+  G       +Y ++
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           INGYC+   ++ A  + +EM   GI  ++ ++NT+  GL ++ ++E   K+  EM+  G+
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D ++Y T IDG C+ G + +A E+   +           YN+L+ G C    ++ AL 
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450

Query: 366 L-FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           L F  L  GV  PN ++ S ++ GL   G+ ++A +L+ +     +  NVITF+ +I G 
Sbjct: 451 LWFLMLKRGV-APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +I   ++  ELL +MKE+   PD+     + D
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFD 542



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 202/415 (48%), Gaps = 21/415 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR++    +L R+ +    PD++T+ +L  G C   ++  A  L  K+   G  P V  
Sbjct: 512 IGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEM 571

Query: 61  YTTLVNG--LCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           + + + G  + +  H +   ++  EM A G         PN VTY  +I G CKEG + +
Sbjct: 572 FNSFITGHFIAKQWHKVN--DIHSEMSARG-------LSPNLVTYGALIAGWCKEGNLHE 622

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A  L  +M +  + PNV   ++++  F      +EA  +  ++++  + P      +   
Sbjct: 623 ACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTI--- 679

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
                 ++D+ S ++D +           +N ++ G C +GR+  AK LF S+ +     
Sbjct: 680 ------EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLP 733

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
             F+YS LI+G   +  I+ A SL   MLS G+ P+++ +N+L  GL +  ++ RA  LF
Sbjct: 734 DNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLF 793

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           +++Q  G++ +  TY T ID  CK G   EA +L   +     +  +  Y+ LI GLC  
Sbjct: 794 NKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQ 853

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G +E A++L   +    + PN +TY  +I G    G M++   L+ +M    ++P
Sbjct: 854 GYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 154/312 (49%), Gaps = 20/312 (6%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +P+ VT+ +LI G C E  + EA  L+ ++   G  P+VF  + L++   +      A 
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659

Query: 79  NLFEEMANGNGEFG----------------VVCEPN----TVTYTTIIDGLCKEGFVDKA 118
            + +++ N +   G                 + + N     V +  II GLCK G +  A
Sbjct: 660 LVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           K L   +++K   P+  TY+S+I G   +   +EA  L   M+  G+ PN++T+N ++  
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK+GK+  A  L + +   G+ P+  TYNTL+D +C  G+   A +L   M   G + T
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPT 839

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +YSILI G C    +E A+ L  +M+   + P+ + + TL  G  +   +E   KL+D
Sbjct: 840 VITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 899

Query: 299 EMQRNGVAADTW 310
           EM   G+    W
Sbjct: 900 EMHIRGLLPTNW 911



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 168/339 (49%), Gaps = 4/339 (1%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           + V++  ++R    A   + A  +F  M   G +P++ + N ++++L ++G    A+ + 
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M   GV PD FT   +   +C  GRV  A E    ME MG +  + +Y  +++ YC  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG-VAADTWT 311
              E A  +   +  KG+ P+VV +  L  G  +  ++E A ++  EM+  G +  D   
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   I+G C+ G + +A  + + +R      ++  YN++I+GLCK GR+E   ++ + + 
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+  +Y+ +I G C +G M KA ++   M  N +    +T++ L++GF  ++   
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLL---AKNEISLN 467
             + L   M +  V P+    S ++D L    K E +LN
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALN 485



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 6/218 (2%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  ++ GLC++     A +LFE + N          P+  TY+++I G    G +D+A  
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKR------FLPDNFTYSSLIHGCAASGSIDEAFS 756

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M    + PN++TY S+I G C +   + A  LF ++  +G+ PN +T+N ++DE C
Sbjct: 757 LRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK  EA +L   M++ G++P   TY+ L+ G C  G +  A +L   M          
Sbjct: 817 KEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYI 876

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           +Y  LI+GY K+  +E    LY EM  +G+ P   I N
Sbjct: 877 TYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 120/243 (49%), Gaps = 3/243 (1%)

Query: 222 HAKELFVSMESMGCKHT--VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           HA+ LF  +  +    T    S+ +L+  +    ++  AL+++  M   G +P +   N 
Sbjct: 129 HAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNR 188

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L +      A  ++ +M+  GV  D +T        C++G + +AVE    +  + 
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            E ++ AY++++D  C  G  E A  +  SL    L PNVVTY++++ G C DG+M++A 
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 400 DLFLDMEENA-VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            +  +M+E   +V + + + M+I G+ +         + ++M++  +  +  + + +++ 
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 459 LAK 461
           L K
Sbjct: 369 LCK 371


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 147/470 (31%), Positives = 240/470 (51%), Gaps = 23/470 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR    + +   ++ +  +P  +TF +LI G C +  ++ A  +F ++RV G  P V  Y
Sbjct: 161 GRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVY 220

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ GLC  +    A    E M     E GV   PN  TY T++DG CK     +A  L
Sbjct: 221 TILIRGLCSDNKIEEA----ESMHRAMREVGVY--PNVYTYNTLMDGYCKLANAKQALRL 274

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  + + P+VVT+  +I G C   +   A+ LF+ M+   V PN+  +N ++D  CK
Sbjct: 275 YQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCK 334

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + EA  L   + +  V PD FTY+ L+ G C   R   A  +F  M   G      +
Sbjct: 335 VGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVT 394

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G CK  +++ AL + S+M   G++P+V+  +TL  G  +I  ++ A  ++ EM 
Sbjct: 395 YNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMV 454

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              ++ D  TY   IDG CK G + EA++L+  +       +    + L+DGLCK G++ 
Sbjct: 455 IKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKIS 514

Query: 362 IALEL------FRSLPCGV-------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            ALEL      F++  C V        + N V Y+ +I GLC DGQ  KA  LF DM   
Sbjct: 515 DALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRY 574

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHK-MKEINVMPDASIVSIVVD 457
            + P+ + + +++RG  ++     ++ +LH  M +  V+P++++  I+ +
Sbjct: 575 GLQPDEVIYVVMLRGLFQVK---YILMMLHADMLKFGVIPNSAVHVILCE 621



 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/431 (32%), Positives = 230/431 (53%), Gaps = 11/431 (2%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F  L R+  S FTP+   +  LI  LC    + EA +++ K+   G    +     L+ 
Sbjct: 101 AFSELSRLKSSKFTPN--VYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLY 155

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            L +T    +   ++EEM + NG       P+ +T+ T+IDG C++G + +A+E+  +M+
Sbjct: 156 VLVKTGRFELLWRIYEEMIS-NG-----LSPSVITFGTLIDGCCRQGDLLRAQEMFDEMR 209

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            K I P V+ YT +IRG C      EA+ +   M + GV PNV T+N +MD  CK     
Sbjct: 210 VKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAK 269

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A RL   M+  G+ PD  T+  L+DG C  G +  A+ LFV+M        +  Y+ LI
Sbjct: 270 QALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLI 329

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           + YCK  ++  A++L+ E+    + PDV  ++ L  GL  + + E A  +F++M + G+ 
Sbjct: 330 DAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGIL 389

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           A++ TY + IDG CK G + +A+E+   +     E ++  +++LIDG CK   L+ A+ +
Sbjct: 390 ANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGI 449

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           +  +    L P+VVTY+ MI G C  G M +A  L+ DM +N + PN  T   L+ G  +
Sbjct: 450 YSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCK 509

Query: 427 INEPSKVIELL 437
             + S  +EL 
Sbjct: 510 DGKISDALELF 520



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 176/336 (52%), Gaps = 5/336 (1%)

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++K     PNV  Y  +I   C  +   EA  ++ ++   G    +   NV++  L K
Sbjct: 105 LSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVK 159

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ +   R+ + MI +G+ P   T+ TL+DG C  G +  A+E+F  M   G   TV  
Sbjct: 160 TGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIV 219

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI G C + +IE A S++  M   G+ P+V  +NTL  G  ++   ++A +L+ +M 
Sbjct: 220 YTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDML 279

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  T+   IDGLCK G +  A  LF  +       +I  YNSLID  CK G + 
Sbjct: 280 GEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVS 339

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+ LF  L    + P+V TYSI+I GLC+  + ++A ++F  M +  ++ N +T++ LI
Sbjct: 340 EAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLI 399

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            G  +  +  K +E+  +M E  V P+    S ++D
Sbjct: 400 DGCCKEGKMDKALEICSQMTENGVEPNVITFSTLID 435



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 151/290 (52%), Gaps = 21/290 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G VS    +   + +   +PD  T++ LI+GLC+ SR  EA  +F K+   G   +  T
Sbjct: 335 VGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVT 394

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++G C+      AL +  +M     E GV  EPN +T++T+IDG CK   +  A  
Sbjct: 395 YNSLIDGCCKEGKMDKALEICSQMT----ENGV--EPNVITFSTLIDGYCKIRNLQAAMG 448

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  K++ P+VVTYT++I G C      EA +L+ +M+D G+ PN  T + ++D LC
Sbjct: 449 IYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLC 508

Query: 181 KNGKMDEASRLLDLMIQH----------GVRP---DAFTYNTLLDGFCLTGRVNHAKELF 227
           K+GK+ +A  L    I+           G +P   +   Y  L+ G C  G+ + A +LF
Sbjct: 509 KDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLF 568

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             M   G +     Y +++ G  + K I   + L+++ML  G+ P+  +H
Sbjct: 569 SDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVIPNSAVH 616



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 20/306 (6%)

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
           +E  +   + N+  ++ I+  L  +  +  A  LL+ ++Q+ V+               +
Sbjct: 47  LEFFNAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVK---------------S 91

Query: 218 GRVNHAKELFVSMESM--GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            +  HA +L  S  S     K T   Y  LI   CK + +E ALS+Y ++   G    + 
Sbjct: 92  HKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKV---GAALTIQ 148

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             N L   L +  + E  +++++EM  NG++    T+ T IDG C+ G ++ A E+F  +
Sbjct: 149 ACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEM 208

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           R+      +  Y  LI GLC   ++E A  + R++    + PNV TY+ ++ G C     
Sbjct: 209 RVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANA 268

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            +A  L+ DM    +VP+V+TF +LI G  +  E      L   M + +V P+ ++ + +
Sbjct: 269 KQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSL 328

Query: 456 VDLLAK 461
           +D   K
Sbjct: 329 IDAYCK 334


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 229/436 (52%), Gaps = 16/436 (3%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K    P+  T+  L+K LC   R+  A  LF ++   GC PD  TYTT+V+ LC+     
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A     E+A   G F    +P+   Y  +IDG+CKEG ++ A +LL +M D  + PNVV
Sbjct: 232 DA----RELA---GRF----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVV 280

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +Y+ +I   C + +   A  LF +M  +G   N+ TF  ++      GK+ EA  L  LM
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           IQ G  P+   YNTL+ G C  G +  A ++   M+  GC   V +YSILI+G+ K+ ++
Sbjct: 341 IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
            GA   ++ M+S G +P+VV +  +   L +    ++A  L ++M   G   +T T+ TF
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTF 460

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I GLC NG +  A++L   ++   C  +I  YN L+D L +  + E A  LF+ +    L
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSK 432
            PN+VTY+ ++ G    G M +A  LF         P+ IT++ +I  +    ++   ++
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580

Query: 433 VIELLHKMKEINVMPD 448
           ++E +  MKE +  PD
Sbjct: 581 LVERVSSMKEWH--PD 594



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 207/415 (49%), Gaps = 9/415 (2%)

Query: 12  GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
            R L   F P    + +LI G+C E RI  A  L  ++   G +P+V +Y+ ++N LC +
Sbjct: 233 ARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVS 292

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
            +  +A  LF +M      F   C+ N  T+T +I G    G + +A +L   M     +
Sbjct: 293 GNVELAFALFAQM------FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           PNVV Y ++I G C      EA ++  +M   G  PNV T+++++D   K+G +  AS  
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET 406

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            + MI HG RP+  TY  ++D  C     + A  L   M   GC     +++  I G C 
Sbjct: 407 WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCG 466

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           N  +E A+ L   M   G  P++  +N L   LF +++ E AF LF E++   +  +  T
Sbjct: 467 NGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSL 370
           Y T + G  + G + EA++LF    +     D   YN++I   CK G+++IA +L  R  
Sbjct: 527 YNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVS 586

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AVVPNVITFDMLIRGF 424
                 P+++TY+ +I G CN   +++A   FLD   N  + PN  T++ L+R F
Sbjct: 587 SMKEWHPDIITYTSLIWGACNWMNIEEAM-AFLDKAINQGICPNFATWNALVRCF 640



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 220/423 (52%), Gaps = 11/423 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  +I G        +A  +F ++  FGC+P V  Y  L++ L   +   +   L+  M 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                 G++  PN  TY  ++  LCK   VD A +L ++M +K   P+ VTYT+++   C
Sbjct: 172 KD----GLI--PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            A   ++A+ L         +P+V  +N ++D +CK G+++ A +LL  M+ +GV P+  
Sbjct: 226 KAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVV 280

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           +Y+ +++  C++G V  A  LF  M   GC   + +++ LI G     ++  AL L+  M
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           +  G +P+VV +NTL  GL     +E A ++ D+MQR+G   +  TY   IDG  K+G +
Sbjct: 341 IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
           V A E ++ +    C  ++  Y  ++D LCK+   + A  L   +      PN +T++  
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTF 460

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I GLC +G+++ A  L   M+ +  +PN+ T++ L+    R+N+  +   L  +++  N+
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520

Query: 446 MPD 448
            P+
Sbjct: 521 QPN 523



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 198/386 (51%), Gaps = 7/386 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +LG ++ +   P+ V+++ +I  LC    +  A ALF ++ + GC+ ++ T+
Sbjct: 258 GRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTF 317

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ G         AL+L++ M          CEPN V Y T+I GLC  G +++A ++
Sbjct: 318 TPLIKGCFMRGKLYEALDLWKLMIQDG------CEPNVVAYNTLIHGLCSNGSLEEALQV 371

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM+     PNV TY+ +I GF  + D   A   +  M+  G +PNVVT+  ++D LCK
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N   D+A+ L++ M   G  P+  T+NT + G C  GRV  A +L   M+  GC   + +
Sbjct: 432 NSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITT 491

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++   +  + E A  L+ E+ ++ ++P++V +NT+  G      +  A +LF +  
Sbjct: 492 YNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKAL 551

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGRL 360
             G A D+ TY T I   CK G +  A +L   +  +K    DI  Y SLI G C    +
Sbjct: 552 VRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNI 611

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMI 386
           E A+          + PN  T++ ++
Sbjct: 612 EEAMAFLDKAINQGICPNFATWNALV 637



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 191/387 (49%), Gaps = 10/387 (2%)

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           L  F  +AN N       +    TY  +I+ L +E  +D  + +L QMK   I      +
Sbjct: 58  LGFFSAIANSNA-----FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G+       +A ++F  + + G +P V  +N ++D L    K    + L   M +
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ P+ FTYN LL   C   RV+ A +LFV M + GC     +Y+ +++  CK  +I+ 
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L         KP V ++N L  G+ +  ++E A KL  EM  NGV  +  +Y   I+
Sbjct: 233 ARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC +G +  A  LF  + +  C+ +I  +  LI G    G+L  AL+L++ +      P
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           NVV Y+ +I GLC++G +++A  +   M+ +  +PNV T+ +LI GF +  +     E  
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEI 464
           ++M      P+    + +VD+L KN +
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSM 434



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 152/304 (50%), Gaps = 7/304 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  ++ +S   P+  T++ LI G      ++ A+  + ++   GC P+V TY
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +V+ LC+ S    A +L E+M          C PNT+T+ T I GLC  G V+ A +L
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEG------CTPNTITFNTFIKGLCGNGRVEWAMKL 476

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+     PN+ TY  ++        + EA  LF E+  + +QPN+VT+N ++    +
Sbjct: 477 LERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSR 536

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT-VF 240
            G M EA +L    +  G  PD+ TYNT++  +C  G+V  A +L   + SM   H  + 
Sbjct: 537 AGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDII 596

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI G C    IE A++   + +++GI P+    N L    F+         + D++
Sbjct: 597 TYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDI 656

Query: 301 QRNG 304
            R G
Sbjct: 657 LRKG 660



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M +    F +   I      P+ VT+ +++ G      + EA  LF K  V G  PD  T
Sbjct: 502 MNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++  C+     +A  L E +++   E+     P+ +TYT++I G C    +++A  
Sbjct: 562 YNTMIHAYCKQGKVKIAAQLVERVSSMK-EW----HPDIITYTSLIWGACNWMNIEEAMA 616

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGF 144
            L +  ++ I PN  T+ +++R F
Sbjct: 617 FLDKAINQGICPNFATWNALVRCF 640


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 230/461 (49%), Gaps = 3/461 (0%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR    + VL  ++K     +A +  +L+  L           L  +++    +P+V T+
Sbjct: 284 GRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTF 343

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N LC+      AL +FE+M NG    G + EP+ +TY T+IDGLCK G  ++   L
Sbjct: 344 GILINHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGL 402

Query: 122 LLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           + +M+ +    PN VTY  +I G+C A     A+ LF +M   GV PNVVT N ++D +C
Sbjct: 403 VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMC 462

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G+++ A    + M   G++ +A TY  L+  FC    +  A ELF  M   GC     
Sbjct: 463 KHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAI 522

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y  LI+G  +  +++ A  + S+M   G  PD+V  N L  G    ++++ A+++  EM
Sbjct: 523 VYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM 582

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G+  D  TY T I    K G    A  L   +        +  Y +LI   C +G L
Sbjct: 583 ENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNL 642

Query: 361 EIALELFRSLPCGVLVP-NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           + A+++FR +     VP N V Y+I+I  LC   Q+D A  L  DM+   V PN  TF+ 
Sbjct: 643 DEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNA 702

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           + +G    N  SK  EL+ +M E    PD   + I+ + L+
Sbjct: 703 MFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLS 743



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/419 (32%), Positives = 213/419 (50%), Gaps = 11/419 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRV-----FGCEPDVFTYTTLVNGLCRTSHTI 75
           P+ VTF  LI  LC   R+ EA  +F K+       F  EPDV TY TL++GLC+     
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQE 397

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
             L L E M +        C PNTVTY  +IDG CK   ++ A+EL  QM    + PNVV
Sbjct: 398 EGLGLVERMRSQ-----PRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVV 452

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T  +++ G C     N A   F EM  +G++ N VT+  ++   C    +++A  L D M
Sbjct: 453 TLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM 512

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           ++ G  PDA  Y TL+ G    G+++ A  +   M+  G    + S+++LING+C+  ++
Sbjct: 513 LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKL 572

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A  +  EM + GIKPD V +NTL     +      A +L  +M + G+     TY   
Sbjct: 573 DEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGAL 632

Query: 316 IDGLCKNGYIVEAVELFHTLR-ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
           I   C NG + EA+++F  +    K   +   YN LI+ LC+  ++++AL L   +    
Sbjct: 633 IHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKG 692

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
           + PN  T++ M  GL     + KA +L   M E+A  P+ IT ++L      + E +K+
Sbjct: 693 VKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKL 751



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 217/453 (47%), Gaps = 14/453 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+++  T LI  LC   R   A  +   L   G   +  +   L+  L R         L
Sbjct: 268 PNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTL 327

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-----IKPNVV 135
             EM   +       +PN VT+  +I+ LCK   VD+A E+  +M         ++P+V+
Sbjct: 328 LAEMKEMD------IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVI 381

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           TY ++I G C      E   L   M  Q    PN VT+N ++D  CK   ++ A  L D 
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M + GV P+  T NTL+DG C  GR+N A E F  M+  G K    +Y+ LI  +C    
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           IE A+ L+ EML  G  PD +++ TL  GL +  +++RA  +  +M+  G + D  ++  
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I+G C+   + EA E+   +     + D   YN+LI    K+G    A  L + +    
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA-VVPNVITFDMLIRGFIRINEPSKV 433
           LVP VVTY  +I   C +G +D+A  +F DM   + V PN + +++LI    R N+    
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681

Query: 434 IELLHKMKEINVMPDASIVSIVVD-LLAKNEIS 465
           + L+  MK   V P+ +  + +   L  KN +S
Sbjct: 682 LSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLS 714



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 181/395 (45%), Gaps = 51/395 (12%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           +K  +L    K   I  +V   T +IR F  A+  +E+  ++ E+       ++   N++
Sbjct: 141 NKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIR--NIL 198

Query: 176 MDELCKNGKMDEASRLLDLMIQ-------------------------------------- 197
           +D L + G++D+A  LLD M+Q                                      
Sbjct: 199 IDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLV 258

Query: 198 -----HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
                H V P++     L+   C +GR + A ++   +  +G      S + L+    + 
Sbjct: 259 SKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRA 318

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM---QRNG--VAA 307
           +E +   +L +EM    I+P+VV    L   L +  +V+ A ++F++M   + NG  V  
Sbjct: 319 REFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEP 378

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRIL-KCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           D  TY T IDGLCK G   E + L   +R   +C  +   YN LIDG CK+  +E A EL
Sbjct: 379 DVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAREL 438

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  +    + PNVVT + ++ G+C  G+++ A + F +M+   +  N +T+  LIR F  
Sbjct: 439 FDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCN 498

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +N   K +EL  +M E    PDA +   ++  L++
Sbjct: 499 VNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQ 533



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 7/231 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     VL ++ ++ F+PD V+F  LI G C ++++ EA  +  ++   G +PD  TY
Sbjct: 535 GKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTY 594

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++   +T     A  L ++M     + G+V  P  VTY  +I   C  G +D+A ++
Sbjct: 595 NTLISHFSKTGDFSTAHRLMKKMV----KEGLV--PTVVTYGALIHAYCLNGNLDEAMKI 648

Query: 122 LLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              M   + + PN V Y  +I   C     + A  L  +M  +GV+PN  TFN +   L 
Sbjct: 649 FRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQ 708

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +   + +A  L+D M +H   PD  T   L +     G     K      E
Sbjct: 709 EKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYE 759


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 146/437 (33%), Positives = 230/437 (52%), Gaps = 6/437 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD VT+ SLI G      + E   L +++R  GC  DV TY  L+N   +      A +
Sbjct: 232 SPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYS 291

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            F EM       GVV   N VT++T +D  CKEG V +A +L  QM+ + + PN  TYTS
Sbjct: 292 YFGEMKRQ----GVV--ANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTS 345

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G C A   ++A  L  EM+ QG+ PNVVT+ V++D LCK GK+ EA  +L LM + G
Sbjct: 346 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V+ +   Y TL+ G  +      A +L   M++ G +  V  Y  LI G CK+++++ A 
Sbjct: 406 VKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAK 465

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           SL  +M   G++P+ VI+ T+   LF+  +   A  L  ++  +G   +  TY   IDGL
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGL 525

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I EA+  F+ +R L  + +++AY +LIDG CK G L  A+ L   +    +  + 
Sbjct: 526 CKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDK 585

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           V Y+ +I G      +  A  L   M E+ +  ++  +   I GF  +N   +   +L +
Sbjct: 586 VVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSE 645

Query: 440 MKEINVMPDASIVSIVV 456
           M    + PD ++ + ++
Sbjct: 646 MIGTGITPDKTVYNCLI 662



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/430 (33%), Positives = 223/430 (51%), Gaps = 10/430 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  TF  +I  LC E  ++EA ALF +++  GC PDV TY +L++G  +         L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM          C  + VTY  +I+   K G ++KA     +MK + +  NVVT+++ 
Sbjct: 258 VSEMRKSG------CAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF 311

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  FC      EA +LF +M  +G+ PN  T+  ++D  CK G++D+A  LLD M+  G+
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TY  ++DG C  G+V  A  +   ME  G K     Y+ LI+G+  N   E AL 
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALD 431

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L ++M +KG++ DV ++ TL  GL +  +V+ A  L  +M   G+  +T  Y T +D L 
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALF 491

Query: 321 KNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           K G   EAV L H  +IL   F  ++  Y +LIDGLCK+G +  A+  F  +    L PN
Sbjct: 492 KAGKESEAVALLH--KILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPN 549

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V  Y+ +I G C  G ++KA  L  +M +  +  + + +  LI G+++         L  
Sbjct: 550 VQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKT 609

Query: 439 KMKEINVMPD 448
           KM E  +  D
Sbjct: 610 KMIESGLQLD 619



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 211/402 (52%), Gaps = 6/402 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+VFT+  +++ LC+    + A  LF  M        + C P+ VTY ++IDG  K G +
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMK------AMGCSPDVVTYNSLIDGYGKCGDL 251

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           ++ ++L+ +M+      +VVTY ++I  F       +A   F EM  QGV  NVVTF+  
Sbjct: 252 EEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF 311

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D  CK G + EA +L   M   G+ P+ FTY +L+DG C  GR++ A  L   M   G 
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +Y+++++G CK  ++  A ++ S M   G+K + +++ TL  G F  +  ERA  
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALD 431

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L ++M+  G+  D   Y T I GLCK+  + EA  L H +       +   Y +++D L 
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALF 491

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K+G+   A+ L   +      PNVVTY  +I GLC  G + +A   F  M E  + PNV 
Sbjct: 492 KAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQ 551

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +  LI GF +I   +K + L+++M +  +  D  + + ++D
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLID 593



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 196/400 (49%), Gaps = 41/400 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+   +   G + +     + VTF++ +   C E  + EA  LF ++RV G  P+ FTY
Sbjct: 284 GRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTY 343

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV------ 115
           T+LV+G C+      A+ L +EM +     G+V  PN VTYT ++DGLCKEG V      
Sbjct: 344 TSLVDGTCKAGRLDDAIVLLDEMVHQ----GLV--PNVVTYTVMVDGLCKEGKVAEADNV 397

Query: 116 -----------------------------DKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                                        ++A +LL QMK+K ++ +V  Y ++I G C 
Sbjct: 398 LSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCK 457

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
            +  +EAK L  +M   G++PN V +  IMD L K GK  EA  LL  ++  G +P+  T
Sbjct: 458 DQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVT 517

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  L+DG C  G ++ A   F  M  +G    V +Y+ LI+G+CK   +  A+ L +EM+
Sbjct: 518 YCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMI 577

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            KG+  D V++ +L  G  +   ++ AF L  +M  +G+  D + Y  FI G C    + 
Sbjct: 578 DKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQ 637

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           EA  +   +       D   YN LI    K G +E A  L
Sbjct: 638 EARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSL 677



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 175/358 (48%), Gaps = 4/358 (1%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           T++  L   G +D A   L +++   + PN  T   ++      +     +RLF    D 
Sbjct: 139 TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLF----DL 194

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
              PNV TFN+++D LCK G++ EA  L   M   G  PD  TYN+L+DG+   G +   
Sbjct: 195 LPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEV 254

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           ++L   M   GC   V +Y+ LIN + K   +E A S + EM  +G+  +VV  +T    
Sbjct: 255 EQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDA 314

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
             +   V+ A KLF +M+  G+  + +TY + +DG CK G + +A+ L   +       +
Sbjct: 315 FCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y  ++DGLCK G++  A  +   +  G +  N + Y+ +I G   +   ++A DL  
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLN 434

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            M+   +  +V  +  LI G  +  +  +   LLHKM    + P+  I + ++D L K
Sbjct: 435 QMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFK 492



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 6/194 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S    +L +IL S F P+ VT+ +LI GLC    I EA + F K+R  G +P+V  Y
Sbjct: 494 GKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAY 553

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++G C+      A++L  EM +           + V YT++IDG  K+  +  A  L
Sbjct: 554 TALIDGFCKIGSLNKAMHLMNEMIDKGMSL------DKVVYTSLIDGYMKQANLQDAFAL 607

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +  ++ ++  YT  I GFC      EA+ +  EM+  G+ P+   +N ++ +  K
Sbjct: 608 KTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQK 667

Query: 182 NGKMDEASRLLDLM 195
            G M+EAS L + M
Sbjct: 668 LGNMEEASSLQNEM 681



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 6/126 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G ++    ++  ++    + D V +TSLI G   ++ + +A AL TK+   G + D++ 
Sbjct: 563 IGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYC 622

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT  ++G C  +    A  +  EM       G    P+   Y  +I    K G +++A  
Sbjct: 623 YTCFISGFCNMNMMQEARGVLSEM------IGTGITPDKTVYNCLIRKYQKLGNMEEASS 676

Query: 121 LLLQMK 126
           L  +M+
Sbjct: 677 LQNEME 682


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 260/508 (51%), Gaps = 42/508 (8%)

Query: 6   HGFVVLG------RILKSCFT----PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG+  LG      R+ K   +    P+ VT ++ +  LC   RI EA   F  +   G +
Sbjct: 289 HGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHK 348

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVVCE---- 96
            ++ +Y+TL++G       +   NLF  M                NG  + G+V E    
Sbjct: 349 LNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFI 408

Query: 97  ----------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                     P+ +TY  +I   C+ G +D A +    M DK ++PN   Y  +I+GFC 
Sbjct: 409 FEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCT 468

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
             D  +A+ L  E+ ++G+ P +++F  +++ LCK G++ EA R+ D++I+ G + D   
Sbjct: 469 HGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNI 528

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           + +L+DG+CL G+++ A  +  +M S+G +  + +Y  L+NG CKN  I+  L L+ E+L
Sbjct: 529 FTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELL 588

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            KG+KP    +  +  GLF   +   A ++F EM  +G+A    TY   + GLC+N    
Sbjct: 589 HKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTE 648

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA+ +F  L  +  +FDI   N +I  + K+ R E A  LF S+P   LVP V TY+IM+
Sbjct: 649 EAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMM 708

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L  +G +++A  +F  M ++ + P     ++++R  +   E  K    + ++   +++
Sbjct: 709 ENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSIL 768

Query: 447 PDASIVSIVVDLLA---KNEISLNSLPS 471
            +AS  S+++ L +   K+   LN LP+
Sbjct: 769 FEASTASMLLSLFSCKGKHREHLNLLPA 796



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 230/461 (49%), Gaps = 5/461 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R+   F   G +L+     D +  +SL++GLC   R  EA   LF ++   GC PD  +Y
Sbjct: 118 RLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISY 177

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +T++  +C    +  AL++        G     C  N V Y+T++ GL KEG V +A +L
Sbjct: 178 STVLKSVCDDGRSQWALDILRMAVKQGGG----CPCNVVVYSTVVHGLFKEGKVGEACDL 233

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + + PNVVTY SVI   C A+  ++A+ +  +M+  GVQP+ VT+N ++     
Sbjct: 234 FHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYST 293

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+  +A R+   M   GV P+  T +T +   C  GR+  A+E F SM + G K  + S
Sbjct: 294 LGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIIS 353

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS L++GY     +    +L++ M+  GI P+  + N L  G  +   V  A  +F++MQ
Sbjct: 354 YSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQ 413

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+  D  TY   I   C+ G + +A++ F+ +     E +   Y  LI G C  G L 
Sbjct: 414 KRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLV 473

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL   +    L P +++++ +I  LC +G++ +A+ +F  +       +V  F  LI
Sbjct: 474 KAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLI 533

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            G+  I + S+   +   M  + + PD      +V+   KN
Sbjct: 534 DGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKN 574



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 241/468 (51%), Gaps = 16/468 (3%)

Query: 4   VSHGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 53
           V HG    G++ ++C            P+ VT+ S+I  LC    + +A  +  ++   G
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
            +PD  TY TL++G         A+ +F+EM +     GV+  PNTVT +T +  LCK G
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSR----GVI--PNTVTCSTFVAFLCKHG 330

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            +++A+E    M  K  K N+++Y++++ G+  A    +   LF  M+  G+ PN   FN
Sbjct: 331 RIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFN 390

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           ++++   K G + EA  + + M + G+ PD  TY  ++  FC  G ++ A + F  M   
Sbjct: 391 ILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK 450

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G +     Y  LI G+C + ++  A  L  E+ +KG+ P ++   +L   L +  +V  A
Sbjct: 451 GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEA 510

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            ++FD + R G  AD   + + IDG C  G + EA  +   +  +  E DI  Y +L++G
Sbjct: 511 QRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG 570

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            CK+GR++  L LFR L    + P   TY I++ GL + G+   A+++F +M E+ +   
Sbjct: 571 CCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVT 630

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + T+ +L+ G  R N   + I +  K+  +NV  D  I++I++  + K
Sbjct: 631 IPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFK 678



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 200/385 (51%), Gaps = 5/385 (1%)

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           +A+ LF  M+ G G    V  P   TY+ +ID  C+   +D A      +  + +K +V+
Sbjct: 82  LAVALFNRMSTGTGP--RVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVI 139

Query: 136 TYTSVIRGFCYAKDWNEA-KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
             +S++RG C AK  +EA   LF  M + G  P+ ++++ ++  +C +G+   A  +L +
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRM 199

Query: 195 MIQH--GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
            ++   G   +   Y+T++ G    G+V  A +LF  M   G    V +Y+ +I+  CK 
Sbjct: 200 AVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA 259

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           + ++ A  +  +M+  G++PD V +NTL  G   + Q ++A ++F EM   GV  +T T 
Sbjct: 260 RAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTC 319

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            TF+  LCK+G I EA E F ++     + +I +Y++L+ G   +G L     LF  +  
Sbjct: 320 STFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVR 379

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             +VPN   ++I++ G    G + +A  +F DM++  + P+V+T+  +I  F R+     
Sbjct: 380 DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDD 439

Query: 433 VIELLHKMKEINVMPDASIVSIVVD 457
            ++  + M +  V P+ ++   ++ 
Sbjct: 440 AMDKFNHMIDKGVEPNFAVYQCLIQ 464



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 205/437 (46%), Gaps = 38/437 (8%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV--------------------- 94
           P V+TY+ L++  CR     +A   F  +     +  V+                     
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 95  ---------CEPNTVTYTTIIDGLCKEGFVDKAKELL-LQMKDKNIKP-NVVTYTSVIRG 143
                    C P+ ++Y+T++  +C +G    A ++L + +K     P NVV Y++V+ G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
                   EA  LF EM  QGV PNVVT+N ++  LCK   +D+A  +L  M+ +GV+PD
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             TYNTL+ G+   G+   A  +F  M S G      + S  +   CK+  IE A   + 
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            ML+KG K +++ ++TL  G      +     LF+ M R+G+  +   +   ++G  K G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + EA+ +F  ++      D+  Y ++I   C+ G ++ A++ F  +    + PN   Y 
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIELLHKM 440
            +I G C  G + KA +L  ++    + P +++F  LI       R+ E  ++ +++ + 
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRT 520

Query: 441 KEINVMPDASIVSIVVD 457
            E     D +I + ++D
Sbjct: 521 GE---KADVNIFTSLID 534



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 169/335 (50%), Gaps = 8/335 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +   + K    PD +T+ ++I   C    + +A   F  +   G EP+   Y
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459

Query: 62  TTLVNGLCRTSHTIVALNLFEEMAN-GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             L+ G C     + A  L  E+ N G G       P  +++ ++I+ LCKEG V +A+ 
Sbjct: 460 QCLIQGFCTHGDLVKAEELVYEIRNKGLG-------PCILSFASLINHLCKEGRVFEAQR 512

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   +     K +V  +TS+I G+C     +EA R+   M+  G++P++VT+  +++  C
Sbjct: 513 IFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCC 572

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG++D+   L   ++  GV+P  FTY  +LDG    GR   AKE+F  M   G   T+ 
Sbjct: 573 KNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIP 632

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YSIL+ G C+N   E A++++ ++ +  +K D+VI N +   +F+  + E A  LF  +
Sbjct: 633 TYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASI 692

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
              G+     TY   ++ L K G + EA  +F  +
Sbjct: 693 PDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVM 727



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 123/231 (53%), Gaps = 9/231 (3%)

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK-L 296
           TV++YSILI+  C+ + ++ A + +  +L +G+K DV++ ++L  GL +  + + A   L
Sbjct: 102 TVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVL 161

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL-----KCEFDIRAYNSLI 351
           F  M   G   D  +Y T +  +C +G    A+++   LR+       C  ++  Y++++
Sbjct: 162 FHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDI---LRMAVKQGGGCPCNVVVYSTVV 218

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GL K G++  A +LF  +    + PNVVTY+ +I  LC    +DKA+ +   M  N V 
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           P+ +T++ LI G+  + +  + + +  +M    V+P+    S  V  L K+
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKH 329



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 6/254 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +   I+++    D   FTSLI G C   ++ EA  +   +   G EPD+ TY
Sbjct: 505 GRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTY 564

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLVNG C+       L LF E+ +     GV  +P T TY  I+DGL   G    AKE+
Sbjct: 565 GTLVNGCCKNGRIDDGLILFRELLHK----GV--KPTTFTYGIILDGLFHAGRTAAAKEM 618

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +  I   + TY+ ++ G C      EA  +F ++    V+ ++V  N+++ ++ K
Sbjct: 619 FQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFK 678

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             + +EA  L   +  +G+ P   TY  +++     G V  A+ +F  M   G   T   
Sbjct: 679 ARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHF 738

Query: 242 YSILINGYCKNKEI 255
            ++++    +  EI
Sbjct: 739 INVIVRTLLEKGEI 752



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 124/257 (48%), Gaps = 7/257 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++S  F V   ++     PD VT+ +L+ G C   RI +   LF +L   G +P  FT
Sbjct: 539 IGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFT 598

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GL     T  A  +F+EM     E G+       TY+ ++ GLC+    ++A  
Sbjct: 599 YGIILDGLFHAGRTAAAKEMFQEMI----ESGIAV--TIPTYSILLTGLCRNNCTEEAIT 652

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  ++   N+K ++V    +I     A+   EA+ LF  + D G+ P V T+ ++M+ L 
Sbjct: 653 VFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLI 712

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G ++EA  +  +M++ G+ P +   N ++      G +  A      ++         
Sbjct: 713 KEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEAS 772

Query: 241 SYSILINGY-CKNKEIE 256
           + S+L++ + CK K  E
Sbjct: 773 TASMLLSLFSCKGKHRE 789


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  244 bits (622), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 138/402 (34%), Positives = 215/402 (53%), Gaps = 6/402 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +F  +IKG C    I ++  L  +LR FG  P+V  YTTL++G C+      A +LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM    G+FG+V   N  TYT +I GL K G   +  E+  +M++  + PN+ TY  V+
Sbjct: 222 FEM----GKFGLVA--NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C      +A +LF EM ++GV  N+VT+N ++  LC+  K +EA++++D M   G+ 
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TYNTL+DGFC  G++  A  L   ++S G   ++ +Y+IL++G+CK  +  GA  +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM  +GIKP  + +  L      +  +E+A +L   M+  G+  D  TY   I G C 
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA  LF  +   K E +   YN+++ G CK G    AL LFR +    L PNV +
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           Y  MI  LC + +  +A  L   M +  + P+    +++ R 
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 230/450 (51%), Gaps = 9/450 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P +  F +L+  +   S   +    F + ++   + DV+++  ++ G C       + 
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKI-KVDLDVYSFGIVIKGCCEAGEIEKSF 183

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L  E+     EFG    PN V YTT+IDG CK G ++KAK+L  +M    +  N  TYT
Sbjct: 184 DLLVELR----EFGF--SPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYT 237

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G        +   ++ +M + GV PN+ T+N +M++ CK+G+  +A +L D M + 
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRER 297

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV  +  TYNTL+ G C   + N A ++   M+S G    + +Y+ LI+G+C   ++  A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           LSL  ++ S+G+ P +V +N L  G  +      A K+  EM+  G+     TY   ID 
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDT 417

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             +   + +A++L   +  L    D+  Y+ LI G C  G++  A  LF+ +    L PN
Sbjct: 418 FARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPN 477

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ M+ G C +G   +A  LF +MEE  + PNV ++  +I    +  +  +   L+ 
Sbjct: 478 KVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVE 537

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           KM +  + P  SI++++    AKN+  ++S
Sbjct: 538 KMIDTGIDPSDSILNLISR--AKNDSHVSS 565



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 182/355 (51%), Gaps = 6/355 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  + +  F+P+ V +T+LI G C    I +A  LF ++  FG   + +TY
Sbjct: 177 GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTY 236

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GL +         ++E+M     E GV   PN  TY  +++  CK+G    A +L
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQ----EDGVF--PNLYTYNCVMNQHCKDGRTKDAFKL 290

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+++ +  N+VTY ++I G C     NEA ++  +M   G+ PN++T+N ++D  C 
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCG 350

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ +A  L   +   G+ P   TYN L+ GFC  G  + A ++   ME  G K +  +
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKIT 410

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+ + +   +E A+ L S M   G+ PDV  ++ L  G     Q+  A +LF  M 
Sbjct: 411 YTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMV 470

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
              +  +   Y T + G CK G    A+ LF  +   +   ++ +Y  +I+ LCK
Sbjct: 471 AKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 186/361 (51%), Gaps = 1/361 (0%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           E  +  Y  +I+   +   +D +     +M DK   P    + +++     +  +N+  R
Sbjct: 91  ETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWR 150

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
            F E   + V  +V +F +++   C+ G+++++  LL  + + G  P+   Y TL+DG C
Sbjct: 151 FFNESKIK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G +  AK+LF  M   G     ++Y++LI+G  KN   +    +Y +M   G+ P++ 
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N +     +  + + AFKLFDEM+  GV+ +  TY T I GLC+     EA ++   +
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +      ++  YN+LIDG C  G+L  AL L R L    L P++VTY+I++ G C  G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
             A  +  +MEE  + P+ IT+ +LI  F R++   K I+L   M+E+ + PD    S++
Sbjct: 390 SGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449

Query: 456 V 456
           +
Sbjct: 450 I 450



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 207/422 (49%), Gaps = 13/422 (3%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  ++N   ++     +++ F EM +     G  C  N +T+      +      ++   
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTF------VVGSSSFNQWWR 150

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              + K K +  +V ++  VI+G C A +  ++  L +E+ + G  PNVV +  ++D  C
Sbjct: 151 FFNESKIK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++++A  L   M + G+  + +TY  L+ G    G      E++  M+  G    ++
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++N +CK+   + A  L+ EM  +G+  ++V +NTL  GL    +   A K+ D+M
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           + +G+  +  TY T IDG C  G + +A+ L   L+       +  YN L+ G CK G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A ++ + +    + P+ +TY+I+I        M+KA  L   MEE  + P+V T+ +L
Sbjct: 390 SGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449

Query: 421 IRGFI---RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           I GF    ++NE S++ +L+   K   + P+  I + +V    K   S  +L  F   E+
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAKK---LEPNKVIYNTMVLGYCKEGSSYRALRLFREMEE 506

Query: 478 QE 479
           +E
Sbjct: 507 KE 508



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 21/249 (8%)

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF------------ 281
           G +HT  S SIL+           A SL  +++S  I+      ++L             
Sbjct: 34  GFQHTHESISILLRLLLSGNLYSHAQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETK 93

Query: 282 VGLFEI--------HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
             L+E+          ++ +   F+EM   G    +  +   +  +  +    +    F+
Sbjct: 94  SRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN 153

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
             +I K + D+ ++  +I G C++G +E + +L   L      PNVV Y+ +I G C  G
Sbjct: 154 ESKI-KVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           +++KA+DLF +M +  +V N  T+ +LI G  +     +  E+  KM+E  V P+    +
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 454 IVVDLLAKN 462
            V++   K+
Sbjct: 273 CVMNQHCKD 281


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 225/430 (52%), Gaps = 11/430 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+++ +  LI  L   +R+ EA  L  ++ + GCEPDV T+  +++GLC+      A  L
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M   +         + +    ++ GLC+ G VD+A+ +L ++ +    PN V Y ++
Sbjct: 293 HDRMLLRD------FTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTL 342

Query: 141 IRGFCYAKDWNEAKRL-FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G+  +  + EAK L +  M+  G +P+  TFN+++D LCK G +  A   LD M++ G
Sbjct: 343 INGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TY  L+DGFC  G    A ++  SM + G       Y+ LI   CK+ +I+ AL
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +Y EM SKG KPD+   N+L  GL +  ++E A  L+ +M   GV A+T TY T I   
Sbjct: 463 QMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            +   I +A +L   +R   C  D   YN LI  LCK+G  E  L L   +    + P++
Sbjct: 523 LRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSI 582

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            + +I+I   C  G+++ A     DM +  + P+++T++ LI G  ++    + + L + 
Sbjct: 583 NSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNG 642

Query: 440 MKEINVMPDA 449
           ++   + PDA
Sbjct: 643 LQAKGIHPDA 652



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 233/461 (50%), Gaps = 11/461 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV+    +L  +      PD  TF  +I GLC   RI EAA L  ++ +     D     
Sbjct: 250 RVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQG 309

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++GLCR      A  +  ++ N          PNTV Y T+I+G    G  ++AK+LL
Sbjct: 310 YLMHGLCRMGKVDEARAMLSKIPN----------PNTVLYNTLINGYVVSGRFEEAKDLL 359

Query: 123 LQ-MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            + M     +P+  T+  +I G C       A     EM+ +G +PNV+T+ +++D  CK
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G  +EAS++++ M   G+  +   YN L+   C  G++  A +++  M S GCK  +++
Sbjct: 420 QGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYT 479

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI G CKN ++E AL LY +ML +G+  + V +NTL      +  +++A KL  EM+
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  TY   I  LCK G   + + L   +   +    I + N LI+  C++G++ 
Sbjct: 540 FRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVN 599

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL+  R +    L P++VTY+ +I GLC  G+  +A +LF  ++   + P+ +T++ LI
Sbjct: 600 DALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             +      +   +LL K      +P+    SI+++   KN
Sbjct: 660 SRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKN 700



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 193/393 (49%), Gaps = 15/393 (3%)

Query: 2   GRVSHGFVVLGRI------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGC 54
           G + HG   +G++      L     P+ V + +LI G     R  EA  L  K + + G 
Sbjct: 309 GYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           EPD FT+  +++GLC+  + + AL   +EM           EPN +TYT +IDG CK+G 
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG------FEPNVITYTILIDGFCKQGH 422

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
            ++A +++  M  K +  N V Y  +I   C      +A +++ EM  +G +P++ TFN 
Sbjct: 423 FEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNS 482

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  LCKN KM+EA  L   M+  GV  +  TYNTL+  F     +  A +L   M   G
Sbjct: 483 LIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG 542

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C     +Y+ LI   CK    E  L L  +M  + I P +   N L        +V  A 
Sbjct: 543 CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +   +M + G+  D  TY + I+GLCK G   EA+ LF+ L+      D   YN+LI   
Sbjct: 603 QFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRY 662

Query: 355 CKSGRLEIALE-LFRSLPCGVLVPNVVTYSIMI 386
           C  G    A + LF+ +  G  +PN +T+SI+I
Sbjct: 663 CYEGLFNDACQLLFKGVSNG-FIPNEITWSILI 694



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 222/441 (50%), Gaps = 11/441 (2%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           CF P   ++  +++ L A +    A  +F  +   G  P V+T+  ++   C  +    A
Sbjct: 160 CFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSA 219

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
            +L  +M          C PN++ Y  +I  L +   V++A +LL +M     +P+V T+
Sbjct: 220 CSLLRDMTKHG------CVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             VI G C A   +EA +L   M+ +    + +    +M  LC+ GK+DEA  +L  +  
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKI-- 331

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKEL-FVSMESMGCKHTVFSYSILINGYCKNKEIE 256
               P+   YNTL++G+ ++GR   AK+L + +M   G +   F+++I+I+G CK   + 
Sbjct: 332 --PNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLV 389

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL    EM+ KG +P+V+ +  L  G  +    E A K+ + M   G++ +T  Y   I
Sbjct: 390 SALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLI 449

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
             LCK+G I +A++++  +    C+ DI  +NSLI GLCK+ ++E AL L+R +    ++
Sbjct: 450 GALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVI 509

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            N VTY+ +I        + +A  L  +M       + IT++ LI+   +     K + L
Sbjct: 510 ANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGL 569

Query: 437 LHKMKEINVMPDASIVSIVVD 457
           + +M    + P  +  +I+++
Sbjct: 570 IEQMFGEEIFPSINSCNILIN 590



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 163/355 (45%), Gaps = 6/355 (1%)

Query: 111 KEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           K G   +A  LLL M      +P   +Y  V+           A  +F +M+ +G+ P V
Sbjct: 141 KAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTV 200

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
            TF V+M   C   ++D A  LL  M +HG  P++  Y  L+       RVN A +L   
Sbjct: 201 YTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEE 260

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M  MGC+  V +++ +I+G CK   I  A  L+  ML +    D +I   L  GL  + +
Sbjct: 261 MFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGK 320

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL-FHTLRILKCEFDIRAYN 348
           V+ A  +  ++       +T  Y T I+G   +G   EA +L +  + I   E D   +N
Sbjct: 321 VDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFN 376

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            +IDGLCK G L  ALE    +      PNV+TY+I+I G C  G  ++A  +   M   
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAK 436

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +  N + ++ LI    +  +    +++  +M      PD    + ++  L KN+
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 168/407 (41%), Gaps = 68/407 (16%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKN-------------------------------- 129
           Y  +ID L   G      +LL QMKD+                                 
Sbjct: 97  YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156

Query: 130 ----IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
                +P   +Y  V+           A  +F +M+ +G+ P V TF V+M   C   ++
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEV 216

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           D A  LL  M +HG  P++  Y  L+       RVN A +L   M  MGC+  V +++ +
Sbjct: 217 DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDV 276

Query: 246 INGYCKNKEIEGALSLYSE-------------------------------MLSKGIKPDV 274
           I+G CK   I  A  L+                                 MLSK   P+ 
Sbjct: 277 IHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNT 336

Query: 275 VIHNTLFVGLFEIHQVERAFK-LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           V++NTL  G     + E A   L+  M   G   D +T+   IDGLCK GY+V A+E   
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLD 396

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +     E ++  Y  LIDG CK G  E A ++  S+    L  N V Y+ +IG LC DG
Sbjct: 397 EMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDG 456

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           ++  A  ++ +M      P++ TF+ LI G  + ++  + + L   M
Sbjct: 457 KIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 126/252 (50%), Gaps = 8/252 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     + G +      PD  TF SLI GLC   ++ EA  L+  + + G   +  TY
Sbjct: 456 GKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTY 515

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV-CEPNTVTYTTIIDGLCKEGFVDKAKE 120
            TL+       H  + L L ++     GE     C  + +TY  +I  LCK G  +K   
Sbjct: 516 NTLI-------HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLG 568

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+ QM  + I P++ +   +I  FC     N+A +   +M+ +G+ P++VT+N +++ LC
Sbjct: 569 LIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLC 628

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+  EA  L + +   G+ PDA TYNTL+  +C  G  N A +L     S G      
Sbjct: 629 KMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEI 688

Query: 241 SYSILINGYCKN 252
           ++SILIN + KN
Sbjct: 689 TWSILINYFVKN 700


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 239/456 (52%), Gaps = 11/456 (2%)

Query: 11  LGR-----ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           LGR     +L S   P+  TF ++IK LC + ++ EA  +   +  +G  PD FTYT+L+
Sbjct: 185 LGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLI 244

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
            G C+  +  +A  +F+ M          C+PN+VTY+ +I+GLC EG +++A ++L +M
Sbjct: 245 IGHCKNGNLDLAFEMFDRMVKDG------CDPNSVTYSALINGLCSEGRLEEAMDMLEEM 298

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
            DK I+P V  YT  I   C A    EA +L  +M  +G  PNV T+  ++  L ++GK 
Sbjct: 299 IDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKF 358

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           + A  +   M+  G+ P A TY+ L++   + GR   A  +F  M S        +Y+++
Sbjct: 359 EVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVI 418

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I G+C    I+ A +++ +ML  G  P+V+ +N +    F+   +  A +L + M+ NG+
Sbjct: 419 IKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL 478

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             DTWTY   I G  + G +  A  LF+ +       ++  YN++I+G     +++ AL 
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALA 538

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           LF  +     VP+  TY++MI G     ++ +A +    M +  ++PNVIT+   I G  
Sbjct: 539 LFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +    S   ++ H+MK+ +  P+    S ++D L +
Sbjct: 599 KNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQ 634



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 229/479 (47%), Gaps = 33/479 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V    +++G I      PD  T+TSLI G C    +  A  +F ++   GC+P+  TY
Sbjct: 216 GKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTY 275

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGE---------------FGVVCE---------- 96
           + L+NGLC       A+++ EEM +   E                G  CE          
Sbjct: 276 SALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKK 335

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN  TYT +I GL ++G  + A  +  +M    + P  VTY+++I        +  
Sbjct: 336 RGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFET 395

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  +F  M+     PN  T+NVI+   C  G + +A+ + D M++ G  P+  TYN ++ 
Sbjct: 396 ALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIH 455

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
            +   G +N+A  L   M+  G K   ++Y+ LI+G+ +  ++E A SL++EM+  GI P
Sbjct: 456 IYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISP 515

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +VV +N +  G   + +V+ A  LF +M  +G    + TY   I G  K   I EA    
Sbjct: 516 NVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFC 575

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +       ++  Y S IDGLCK+GR  +A ++F  +      PN+ TYS +I GLC +
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQE 635

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           GQ + A  L  D  E    PNV T+  L+RG        +  +L+  MK+  + P   I
Sbjct: 636 GQAEDAERLLDDGCE----PNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEI 690



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 146/481 (30%), Positives = 238/481 (49%), Gaps = 45/481 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRI---------------------- 39
           G +   F +  R++K    P++VT+++LI GLC+E R+                      
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310

Query: 40  -------------MEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
                         EA  L  K++  GC P+V TYT L++GL R     VA+ ++ +M  
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA 370

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                G+V  P  VTY+ +I+ L  EG  + A  +   M   +  PN  TY  +I+GFC 
Sbjct: 371 D----GLV--PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCS 424

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
                +A  +F +M+  G  PNV+T+N+I+    K G M+ A RLL++M  +G++ D +T
Sbjct: 425 IGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWT 484

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  L+ GF   G++ HA  LF  M   G    V +Y+ +INGY    +++ AL+L+ +M+
Sbjct: 485 YANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMV 544

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G  P    +N +  G  + +++  A     +M + G+  +  TY +FIDGLCKNG   
Sbjct: 545 ESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTS 604

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            A ++FH ++      ++  Y+SLIDGLC+ G+ E A  L     C    PNV TY+ ++
Sbjct: 605 LAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD-GCE---PNVDTYTTLV 660

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC  G+  +A  L   M++  + P+   +  L+ G  +  E    +++   M      
Sbjct: 661 RGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQ 720

Query: 447 P 447
           P
Sbjct: 721 P 721



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 203/410 (49%), Gaps = 6/410 (1%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  P++FT+  ++  LC       A     E+  G+      C P+T TYT++I G CK 
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEA-----ELIMGHIFHYGAC-PDTFTYTSLIIGHCKN 250

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G +D A E+  +M      PN VTY+++I G C      EA  +  EM+D+G++P V  +
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
            + +  LC  G+  EA +LL  M + G  P+  TY  L+ G    G+   A  ++  M +
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA 370

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G   T  +YS LIN        E AL+++  MLS    P+   +N +  G   I  +++
Sbjct: 371 DGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQK 430

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  +FD+M + G + +  TY   I    K GY+  A+ L   ++    + D   Y +LI 
Sbjct: 431 ATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLIS 490

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G  + G+LE A  LF  +    + PNVVTY+ +I G     ++D A  LF  M E+  VP
Sbjct: 491 GFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP 550

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +  T++M+I GF + N  S+      KM +  ++P+    +  +D L KN
Sbjct: 551 SSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 211/443 (47%), Gaps = 10/443 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V  ++L     P AVT+++LI  L  E R   A  +F  +      P+  TY
Sbjct: 356 GKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETY 415

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ G C   +   A  +F++M            PN +TY  II    K+G+++ A  L
Sbjct: 416 NVIIKGFCSIGYIQKATAIFDQMLKAGPS------PNVITYNIIIHIYFKQGYMNNAMRL 469

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  MK   +K +  TY ++I GF        A  LF EM++ G+ PNVVT+N I++    
Sbjct: 470 LEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLT 529

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+D+A  L   M++ G  P + TYN ++ GF  T R++ A+     M   G    V +
Sbjct: 530 VAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVIT 589

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  I+G CKN     A  ++ EM  +   P++  +++L  GL +  Q E A +L D+  
Sbjct: 590 YTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD-- 647

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   +  TY T + GLC  G   EA +L  +++    +     Y +L+ G CK+  +E
Sbjct: 648 --GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVE 705

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL++F S+      P +  Y  +I  LC      KA+ +F  M +     + + + +L+
Sbjct: 706 SALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLL 765

Query: 422 RGFIRINEPSKVIELLHKMKEIN 444
            G ++  E    +ELLH M+  N
Sbjct: 766 DGLLKEGETDLSLELLHVMESRN 788



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 175/368 (47%), Gaps = 10/368 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +  ++LK+  +P+ +T+  +I     +  +  A  L   ++  G + D +T
Sbjct: 425 IGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWT 484

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++G  R      A +LF EM     E G+   PN VTY  II+G      VD A  
Sbjct: 485 YANLISGFSRGGKLEHAFSLFNEMV----EHGI--SPNVVTYNAIINGYLTVAKVDDALA 538

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M +    P+  TY  +I GF      +EA+    +M+ QG+ PNV+T+   +D LC
Sbjct: 539 LFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG+   A ++   M +    P+  TY++L+DG C  G+   A+ L       GC+  V 
Sbjct: 599 KNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVD 654

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+ G C       A  L   M  KG++P   I+  L VG  +  +VE A K+FD M
Sbjct: 655 TYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSM 714

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G       Y+  I  LCK  +  +A  +F T+       D   +  L+DGL K G  
Sbjct: 715 VTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGET 774

Query: 361 EIALELFR 368
           +++LEL  
Sbjct: 775 DLSLELLH 782



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 177/358 (49%), Gaps = 23/358 (6%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T+ +LI G     ++  A +LF ++   G  P+V TY  ++NG    +    AL LF
Sbjct: 481 DTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALF 540

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M     E G V  P++ TY  +I G  K   + +A+    +M  + + PNV+TYTS I
Sbjct: 541 WKMV----ESGNV--PSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C     + A ++F EM  +   PN+ T++ ++D LC+ G+ ++A RLLD     G  
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD----DGCE 650

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TY TL+ G C  GR   A +L  SM+  G + +   Y  L+ G CKN E+E AL +
Sbjct: 651 PNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKI 710

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M++ G +P +  +  L   L + +  ++A  +F  M +    +D   +   +DGL K
Sbjct: 711 FDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLK 770

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            G    ++EL H +    C  + +             R+ +A EL  +L C + +P +
Sbjct: 771 EGETDLSLELLHVMESRNCTLNFQT------------RVMLAREL-SALGCSIEIPQI 815



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 166/338 (49%), Gaps = 10/338 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++ H F +   +++   +P+ VT+ ++I G    +++ +A ALF K+   G  P   TY
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G  +T+    A N   +M       G++  PN +TYT+ IDGLCK G    A ++
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQ----GLL--PNVITYTSFIDGLCKNGRTSLAFKI 609

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK ++  PN+ TY+S+I G C      +A+RL    +D G +PNV T+  ++  LC 
Sbjct: 610 FHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL----LDDGCEPNVDTYTTLVRGLCG 665

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+  EA +L++ M + G++P    Y  LL G C    V  A ++F SM + G +  +  
Sbjct: 666 KGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSD 725

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LI   CK    + A  ++  ML K    D V+   L  GL +  + + + +L   M+
Sbjct: 726 YKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVME 785

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
                 +  T       L   G  +E  ++   L I+K
Sbjct: 786 SRNCTLNFQTRVMLARELSALGCSIEIPQISKQLGIVK 823



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 139/275 (50%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+  G+RP+ FT+N ++   C  G+V  A+ +   +   G     F+Y+ LI G+CKN  
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           ++ A  ++  M+  G  P+ V ++ L  GL    ++E A  + +EM   G+      Y  
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I  LC  G   EAV+L   ++   C  +++ Y +LI GL + G+ E+A+ ++  +    
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADG 372

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           LVP  VTYS +I  L  +G+ + A  +F  M  +  +PN  T++++I+GF  I    K  
Sbjct: 373 LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT 432

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            +  +M +    P+    +I++ +  K     N++
Sbjct: 433 AIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAM 467



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 134/268 (50%), Gaps = 10/268 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + +V     +  ++++S   P + T+  +I G    +RI EA     K+   G  P+V T
Sbjct: 530 VAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVIT 589

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT+ ++GLC+   T +A  +F EM   +        PN  TY+++IDGLC+EG  + A+ 
Sbjct: 590 YTSFIDGLCKNGRTSLAFKIFHEMKKRD------YFPNLCTYSSLIDGLCQEGQAEDAER 643

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL    D   +PNV TYT+++RG C      EA +L   M  +G+QP+   +  ++   C
Sbjct: 644 LL----DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQC 699

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN +++ A ++ D M+  G +P    Y  L+   C       A+ +F +M          
Sbjct: 700 KNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEV 759

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSK 268
            +++L++G  K  E + +L L   M S+
Sbjct: 760 VWTVLLDGLLKEGETDLSLELLHVMESR 787



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 3/253 (1%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           +T++S+S L+    K         +Y EML+ GI+P++   N +   L    +V+ A  +
Sbjct: 165 YTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELI 224

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
              +   G   DT+TY + I G CKNG +  A E+F  +    C+ +   Y++LI+GLC 
Sbjct: 225 MGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCS 284

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            GRLE A+++   +    + P V  Y+I I  LC+ G+  +A  L   M++    PNV T
Sbjct: 285 EGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQT 344

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL---AKNEISLNSLPSFT 473
           +  LI G  R  +    I + HKM    ++P A   S +++ L    + E +L       
Sbjct: 345 YTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWML 404

Query: 474 VHEQQEEVDESNV 486
            H+     +  NV
Sbjct: 405 SHDSLPNTETYNV 417


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 243/483 (50%), Gaps = 42/483 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V  ++++    PD    + ++   C + ++ EAA    K+   G EP++ TY
Sbjct: 171 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 230

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NG         A  + + M+    E GV    N VTYT +I G CK+  +D+A+++
Sbjct: 231 HSLINGYVSLGDVEAAKGVLKFMS----EKGV--SRNVVTYTLLIKGYCKQCKMDEAEKV 284

Query: 122 LLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  M+++  + P+   Y  +I G+C     ++A RL  EM+  G++ N+   N +++  C
Sbjct: 285 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 344

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ EA  ++  M+   ++PD+++YNTLLDG+C  G  + A  L   M   G + TV 
Sbjct: 345 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 404

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+ G C+    + AL ++  M+ +G+ PD V ++TL  GLF++   E A  L+ ++
Sbjct: 405 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 464

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS--- 357
              G      T+ T I GLCK G +VEA E+F  ++ L C  D   Y +LIDG CK+   
Sbjct: 465 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 524

Query: 358 -------GRLE-----IALELFRSLPCGV--------------------LVPNVVTYSIM 385
                  G +E      ++E++ SL  G+                    L PN+VTY  +
Sbjct: 525 GQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 584

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G C +G +DKA   + +M EN +  N+I    ++ G  R+    +   L+ KM +   
Sbjct: 585 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 644

Query: 446 MPD 448
            PD
Sbjct: 645 FPD 647



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 232/513 (45%), Gaps = 73/513 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  +L+     +     SLI G C    I EA  + T++  +  +PD ++Y
Sbjct: 312 GKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSY 371

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G CR  HT  A NL ++M     + G+  EP  +TY T++ GLC+ G  D A ++
Sbjct: 372 NTLLDGYCREGHTSEAFNLCDKML----QEGI--EPTVLTYNTLLKGLCRVGAFDDALQI 425

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  + + P+ V Y++++ G    +++  A  L+ +++ +G   + +TFN ++  LCK
Sbjct: 426 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 485

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA------------------ 223
            GKM EA  + D M   G  PD  TY TL+DG+C    V  A                  
Sbjct: 486 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEM 545

Query: 224 -----------------KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                             +L   M   G    + +Y  LI+G+CK   ++ A S Y EM 
Sbjct: 546 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 605

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD------------------ 308
             G+  +++I +T+  GL+ + +++ A  L  +M  +G   D                  
Sbjct: 606 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 665

Query: 309 --------------TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                            Y   I GLCK G + +A   F  L +     D   Y +LI G 
Sbjct: 666 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 725

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
             +G ++ A  L   +    LVPN+VTY+ +I GLC    +D+A+ LF  + +  + PNV
Sbjct: 726 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 785

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           +T++ LI G+ +I       +L  KM E  + P
Sbjct: 786 VTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 818



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 228/446 (51%), Gaps = 9/446 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+P    F  ++K    +     A  +F  +   G  P + +  +L+N L +   T  A 
Sbjct: 120 FSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 177

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            ++++M       G+V  P+    + +++  CK+G VD+A   + +M++  ++PN+VTY 
Sbjct: 178 YVYQQMI----RVGIV--PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 231

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I G+    D   AK +   M ++GV  NVVT+ +++   CK  KMDEA ++L  M + 
Sbjct: 232 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 291

Query: 199 G-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
             + PD   Y  L+DG+C TG+++ A  L   M  +G K  +F  + LINGYCK  EI  
Sbjct: 292 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 351

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  + + M+   +KPD   +NTL  G         AF L D+M + G+     TY T + 
Sbjct: 352 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 411

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLC+ G   +A++++H +       D   Y++L+DGL K    E A  L++ +       
Sbjct: 412 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 471

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + +T++ MI GLC  G+M +A ++F  M++    P+ IT+  LI G+ + +   +  ++ 
Sbjct: 472 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVK 531

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNE 463
             M+   + P   + + ++  L K+ 
Sbjct: 532 GAMEREPISPSIEMYNSLISGLFKSR 557



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 211/474 (44%), Gaps = 61/474 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V+ R++     PD+ ++ +L+ G C E    EA  L  K+   G EP V TY
Sbjct: 347 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 406

Query: 62  TTLVNGLCRTSHTIVALNLFE----------------------EMANGNGEFGVVCE--- 96
            TL+ GLCR      AL ++                       +M N  G   +  +   
Sbjct: 407 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 466

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                + +T+ T+I GLCK G + +A+E+  +MKD    P+ +TY ++I G+C A +  +
Sbjct: 467 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 526

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A ++   M  + + P++  +N ++  L K+ ++ E + LL  M   G+ P+  TY  L+D
Sbjct: 527 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 586

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C  G ++ A   +  M   G    +   S +++G  +   I+ A  L  +M+  G  P
Sbjct: 587 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 646

Query: 273 DV--------------------------------VIHNTLFVGLFEIHQVERAFKLFDEM 300
           D                                 +++N    GL +  +V+ A + F  +
Sbjct: 647 DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 706

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D +TY T I G    G + EA  L   +       +I  YN+LI+GLCKS  +
Sbjct: 707 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 766

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           + A  LF  L    L PNVVTY+ +I G C  G MD A  L   M E  + P++
Sbjct: 767 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 180/388 (46%), Gaps = 20/388 (5%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---NIKPNVV--TYTSVIRGFCYAKD- 149
            PN  +Y  ++  L +    D+ +  L Q+ D      + NV+      V R F ++   
Sbjct: 65  RPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTV 124

Query: 150 -------------WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
                           A  +F  M   G  P++ + N +++ L KNG+   A  +   MI
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G+ PD F  + +++ FC  G+V+ A      ME++G +  + +Y  LINGY    ++E
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG-VAADTWTYRTF 315
            A  +   M  KG+  +VV +  L  G  +  +++ A K+   MQ    +  D   Y   
Sbjct: 245 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 304

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           IDG C+ G I +AV L   +  L  + ++   NSLI+G CK G +  A  +   +    L
Sbjct: 305 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 364

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+  +Y+ ++ G C +G   +A +L   M +  + P V+T++ L++G  R+      ++
Sbjct: 365 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 424

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + H M +  V PD    S ++D L K E
Sbjct: 425 IWHLMMKRGVAPDEVGYSTLLDGLFKME 452


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 253/504 (50%), Gaps = 44/504 (8%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V  G+ +L  + K        T+ +++KG+C+   +  A  +  ++   GC P+V  YTT
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+    + S    A+ + +EM     E G+   P+   Y ++I GL K   +D+A+  L+
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M +  +KPN  TY + I G+  A ++  A +   EM + GV PN V    +++E CK  
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKE 571

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ EA      M+  G+  DA TY  L++G     +V+ A+E+F  M   G    VFSY 
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +LING+ K   ++ A S++ EM+ +G+ P+V+I+N L  G     ++E+A +L DEM   
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  +  TY T IDG CK+G + EA  LF  +++     D   Y +L+DG C+   +E A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 364 LELF---------RSLPCGVLV-----------------------------PNVVTYSIM 385
           + +F          + P   L+                             PN VTY+IM
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I  LC +G ++ A++LF  M+   ++P VIT+  L+ G+ ++   +++  +  +     +
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871

Query: 446 MPDASIVSIVVDLLAKNEISLNSL 469
            PD  + S++++   K  ++  +L
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKAL 895



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 225/468 (48%), Gaps = 29/468 (6%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             P   T+  LI GLC   R+ +A +L  ++   G   D  TY+ L++GL +  +   A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 79  NLFEEMANG-----------------------------NGEFGVVCEPNTVTYTTIIDGL 109
            L  EM +                              +G       P    Y ++I+G 
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           C+E  V +  ELL++MK +NI  +  TY +V++G C + D + A  +  EM+  G +PNV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           V +  ++    +N +  +A R+L  M + G+ PD F YN+L+ G     R++ A+   V 
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G K   F+Y   I+GY +  E   A     EM   G+ P+ V+   L     +  +
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEK 572

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V  A   +  M   G+  D  TY   ++GL KN  + +A E+F  +R      D+ +Y  
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+G  K G ++ A  +F  +    L PNV+ Y++++GG C  G+++KA++L  +M    
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + PN +T+  +I G+ +  + ++   L  +MK   ++PD+ + + +VD
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 232/491 (47%), Gaps = 44/491 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   + ++  ++ S   P+ V +T+LIK     SR  +A  +  +++  G  PD+F Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ GL +      A +   EM   NG      +PN  TY   I G  +      A + 
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVE-NG-----LKPNAFTYGAFISGYIEASEFASADKY 544

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M++  + PN V  T +I  +C  +   EA   +  M+DQG+  +  T+ V+M+ L K
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N K+D+A  +   M   G+ PD F+Y  L++GF   G +  A  +F  M   G    V  
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++L+ G+C++ EIE A  L  EM  KG+ P+ V + T+  G  +   +  AF+LFDEM+
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-------------------------- 335
             G+  D++ Y T +DG C+   +  A+ +F T                           
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784

Query: 336 ------RILKCEFDIRA------YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
                 R++   FD         YN +ID LCK G LE A ELF  +    L+P V+TY+
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            ++ G    G+  +   +F +     + P+ I + ++I  F++    +K + L+ +M   
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904

Query: 444 NVMPDASIVSI 454
           N + D   +SI
Sbjct: 905 NAVDDGCKLSI 915



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 185/414 (44%), Gaps = 51/414 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V  T LI   C + +++EA + +  +   G   D  TYT L+NGL +      A  +
Sbjct: 555 PNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM  G G       P+  +Y  +I+G  K G + KA  +  +M ++ + PNV+ Y  +
Sbjct: 615 FREM-RGKG-----IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GFC + +  +AK L  EM  +G+ PN VT+  I+D  CK+G + EA RL D M   G+
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT----------VF---------- 240
            PD+F Y TL+DG C    V  A  +F      GC  +          VF          
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTE 787

Query: 241 -------------------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
                              +Y+I+I+  CK   +E A  L+ +M +  + P V+ + +L 
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-- 339
            G  ++ +    F +FDE    G+  D   Y   I+   K G   +A+ L   +      
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 340 ---CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
              C+  I    +L+ G  K G +E+A ++  ++     +P+  T   +I   C
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 209/453 (46%), Gaps = 20/453 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + D V F  L  G  A+  I EA  +F+        P +     L++ L R +     L+
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LD 203

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF ++  G  E  VV +  T  Y  +I   C+ G V   K++L + + +       T T 
Sbjct: 204 LFWDVYKGMVERNVVFDVKT--YHMLIIAHCRAGNVQLGKDVLFKTEKE-----FRTATL 256

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            + G         A +L   M+ +G+ P   T++V++D LCK  ++++A  LL  M   G
Sbjct: 257 NVDG---------ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V  D  TY+ L+DG       + AK L   M S G     + Y   I    K   +E A 
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +L+  M++ G+ P    + +L  G      V + ++L  EM++  +    +TY T + G+
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C +G +  A  +   +    C  ++  Y +LI    ++ R   A+ + + +    + P++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             Y+ +I GL    +MD+AR   ++M EN + PN  T+   I G+I  +E +   + + +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           M+E  V+P+  + + +++   K E  + +  ++
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKEKVIEACSAY 580



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 16/329 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +   +++   TP+ + +  L+ G C    I +A  L  ++ V G  P+  T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++G C++     A  LF+EM       G+V  P++  YTT++DG C+   V++A  
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLK----GLV--PDSFVYTTLVDGCCRLNDVERAIT 753

Query: 121 LLLQMKDKNIKPNVVTYTSVIRG-FCYAKDWNEAK---RLFIEMMDQGVQPNVVTFNVIM 176
           +    K K    +   + ++I   F + K   + +   RL     D+  +PN VT+N+++
Sbjct: 754 IFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D LCK G ++ A  L   M    + P   TY +LL+G+   GR      +F    + G +
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSK-----GIKPDVVIHNTLFVGLFEIHQVE 291
                YS++IN + K      AL L  +M +K     G K  +     L  G  ++ ++E
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            A K+ + M R     D+ T    I+  C
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 77/234 (32%)

Query: 291 ERAFKLFDEM-QRNGVAADTWT------------------YRTFIDGLCKNGYIVEAVEL 331
           E+A  + + M +RN   A+ W+                  +    DG    GYI EAV +
Sbjct: 114 EKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFV 173

Query: 332 FHTL-------RILKCE----------------------------FDIRAYNSLIDGLCK 356
           F +        R+ +C+                            FD++ Y+ LI   C+
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233

Query: 357 SGRLEI---------------------ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +G +++                     AL+L  S+ C  LVP   TY ++I GLC   ++
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM--KEINVMP 447
           + A+ L ++M+   V  +  T+ +LI G ++         L+H+M    IN+ P
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/453 (32%), Positives = 240/453 (52%), Gaps = 6/453 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V  R++   F P   T++SL+ GL     I     L  ++   G +P+V+T+T  +  L 
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R      A  + + M +        C P+ VTYT +ID LC    +D AKE+  +MK   
Sbjct: 270 RAGKINEAYEILKRMDDEG------CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            KP+ VTY +++  F   +D +  K+ + EM   G  P+VVTF +++D LCK G   EA 
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             LD+M   G+ P+  TYNTL+ G     R++ A ELF +MES+G K T ++Y + I+ Y
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K+ +   AL  + +M +KGI P++V  N     L +  +   A ++F  ++  G+  D+
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   +    K G I EA++L   +    CE D+   NSLI+ L K+ R++ A ++F  
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    L P VVTY+ ++ GL  +G++ +A +LF  M +    PN ITF+ L     + +E
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +  +++L KM ++  +PD    + ++  L KN
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 226/437 (51%), Gaps = 12/437 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++  + +L R+      PD VT+T LI  LC   ++  A  +F K++    +PD  TY
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++              + EM   +G       P+ VT+T ++D LCK G   +A + 
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEK-DGHV-----PDVVTFTILVDALCKAGNFGEAFDT 385

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+D+ I PN+ TY ++I G       ++A  LF  M   GV+P   T+ V +D   K
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    A    + M   G+ P+    N  L      GR   AK++F  ++ +G      +
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++++  Y K  EI+ A+ L SEM+  G +PDV++ N+L   L++  +V+ A+K+F  M+
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +     TY T + GL KNG I EA+ELF  +    C  +   +N+L D LCK+  + 
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625

Query: 362 IALE-LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +AL+ LF+ +  G  VP+V TY+ +I GL  +GQ+ +A   F  M++  V P+ +T   L
Sbjct: 626 LALKMLFKMMDMGC-VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFVTLCTL 683

Query: 421 IRGFIR---INEPSKVI 434
           + G ++   I +  K+I
Sbjct: 684 LPGVVKASLIEDAYKII 700



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 230/497 (46%), Gaps = 41/497 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     V   + K     D  T+ ++ K L  +  + +A     K+R FG   + ++Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ L ++     A+ ++  M            P+  TY++++ GL K   +D    L
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEG------FRPSLQTYSSLMVGLGKRRDIDSVMGL 245

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   +KPNV T+T  IR    A   NEA  +   M D+G  P+VVT+ V++D LC 
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+D A  + + M     +PD  TY TLLD F     ++  K+ +  ME  G    V +
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++IL++  CK      A      M  +GI P++  +NTL  GL  +H+++ A +LF  M+
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV    +TY  FID   K+G  V A+E F  ++      +I A N+ +  L K+GR  
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485

Query: 362 IALELFRSLPCGVLVPNVVTYSIM-----------------------------------I 386
            A ++F  L    LVP+ VTY++M                                   I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L    ++D+A  +F+ M+E  + P V+T++ L+ G  +  +  + IEL   M +    
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605

Query: 447 PDASIVSIVVDLLAKNE 463
           P+    + + D L KN+
Sbjct: 606 PNTITFNTLFDCLCKND 622



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 174/338 (51%), Gaps = 14/338 (4%)

Query: 6    HGFVVLGRILKSCFT------PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
            H  V   R L   FT      P   T+  LI GL     I  A  +F +++  GC PDV 
Sbjct: 762  HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821

Query: 60   TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            TY  L++   ++        L++EM+         CE NT+T+  +I GL K G VD A 
Sbjct: 822  TYNFLLDAYGKSGKIDELFELYKEMSTHE------CEANTITHNIVISGLVKAGNVDDAL 875

Query: 120  ELLLQ-MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            +L    M D++  P   TY  +I G   +    EAK+LF  M+D G +PN   +N++++ 
Sbjct: 876  DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935

Query: 179  LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
              K G+ D A  L   M++ GVRPD  TY+ L+D  C+ GRV+     F  ++  G    
Sbjct: 936  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995

Query: 239  VFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            V  Y+++ING  K+  +E AL L++EM  S+GI PD+  +N+L + L     VE A K++
Sbjct: 996  VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055

Query: 298  DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +E+QR G+  + +T+   I G   +G    A  ++ T+
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 217/463 (46%), Gaps = 11/463 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +L  ++++   PD +   SLI  L    R+ EA  +F +++    +P V T
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+ GL +      A+ LFE M          C PNT+T+ T+ D LCK   V  A +
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKG------CPPNTITFNTLFDCLCKNDEVTLALK 629

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L +M D    P+V TY ++I G        EA   F   M + V P+ VT   ++  + 
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVV 688

Query: 181 KNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHT 238
           K   +++A +++ + +     +P    +  L+        +++A      + + G C+  
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
                 +I   CK+  + GA +L+ +     G++P +  +N L  GL E   +E A  +F
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            +++  G   D  TY   +D   K+G I E  EL+  +   +CE +   +N +I GL K+
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868

Query: 358 GRLEIALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           G ++ AL+L+  L       P   TY  +I GL   G++ +A+ LF  M +    PN   
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +++LI GF +  E      L  +M +  V PD    S++VD L
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 238/505 (47%), Gaps = 56/505 (11%)

Query: 3    RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            RV   + +  R+ +    P  VT+ +L+ GL    +I EA  LF  +   GC P+  T+ 
Sbjct: 553  RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612

Query: 63   TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            TL + LC+     +AL +  +M +      + C P+  TY TII GL K G V +A    
Sbjct: 613  TLFDCLCKNDEVTLALKMLFKMMD------MGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666

Query: 123  LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR---------------LFIE------MM 161
             QMK K + P+ VT  +++ G   A    +A +               LF E      + 
Sbjct: 667  HQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILA 725

Query: 162  DQGVQPNVVTFN-----------------VIMDELCKNGKMDEASRLLDLMIQH-GVRPD 203
            + G+  N V+F+                  I+   CK+  +  A  L +   +  GV+P 
Sbjct: 726  EAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784

Query: 204  AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
              TYN L+ G      +  A+++F+ ++S GC   V +Y+ L++ Y K+ +I+    LY 
Sbjct: 785  LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844

Query: 264  EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF-DEMQRNGVAADTWTYRTFIDGLCKN 322
            EM +   + + + HN +  GL +   V+ A  L+ D M     +    TY   IDGL K+
Sbjct: 845  EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904

Query: 323  GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
            G + EA +LF  +    C  +   YN LI+G  K+G  + A  LF+ +    + P++ TY
Sbjct: 905  GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964

Query: 383  SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
            S+++  LC  G++D+    F +++E+ + P+V+ ++++I G  + +   + + L ++MK 
Sbjct: 965  SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK- 1023

Query: 443  INVMPDASIVSIVVDLLAKNEISLN 467
                   +   I  DL   N + LN
Sbjct: 1024 -------TSRGITPDLYTYNSLILN 1041



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 220/473 (46%), Gaps = 41/473 (8%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T   +++ L  + ++ E A +F  ++    + D  TY T+   L        A     +M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                EFG V   N  +Y  +I  L K  F  +A E+  +M  +  +P++ TY+S++ G 
Sbjct: 180 R----EFGFVL--NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL 233

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
              +D +    L  EM   G++PNV TF + +  L + GK++EA  +L  M   G  PD 
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  L+D  C   +++ AKE+F  M++   K    +Y  L++ +  N++++     +SE
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353

Query: 265 MLSKGIKPDVV-----------------------------------IHNTLFVGLFEIHQ 289
           M   G  PDVV                                    +NTL  GL  +H+
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           ++ A +LF  M+  GV    +TY  FID   K+G  V A+E F  ++      +I A N+
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
            +  L K+GR   A ++F  L    LVP+ VTY++M+      G++D+A  L  +M EN 
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             P+VI  + LI    + +   +  ++  +MKE+ + P     + ++  L KN
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 212/446 (47%), Gaps = 46/446 (10%)

Query: 15   LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC--EPDVFTYTTLV------- 65
            +K    PD VT  +L+ G+   S I +A  + T   ++ C  +P    +  L+       
Sbjct: 669  MKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF-LYNCADQPANLFWEDLIGSILAEA 727

Query: 66   --------------NGLCRTSHTIV---------------ALNLFEEMANGNGEFGVVCE 96
                          NG+CR   +I+               A  LFE+      + GV  +
Sbjct: 728  GIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK---DLGV--Q 782

Query: 97   PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
            P   TY  +I GL +   ++ A+++ LQ+K     P+V TY  ++  +  +   +E   L
Sbjct: 783  PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842

Query: 157  FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFC 215
            + EM     + N +T N+++  L K G +D+A  L  DLM      P A TY  L+DG  
Sbjct: 843  YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902

Query: 216  LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             +GR+  AK+LF  M   GC+     Y+ILING+ K  E + A +L+  M+ +G++PD+ 
Sbjct: 903  KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962

Query: 276  IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             ++ L   L  + +V+     F E++ +G+  D   Y   I+GL K+  + EA+ LF+ +
Sbjct: 963  TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022

Query: 336  RILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
            +  +    D+  YNSLI  L  +G +E A +++  +    L PNV T++ +I G    G+
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082

Query: 395  MDKARDLFLDMEENAVVPNVITFDML 420
             + A  ++  M      PN  T++ L
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 207/454 (45%), Gaps = 35/454 (7%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS-----HTI 75
            PD  T+ ++I GL    ++ EA   F +++     PD  T  TL+ G+ + S     + I
Sbjct: 641  PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKI 699

Query: 76   VA----------LNLFEEMANGN--GEFGV--------------VCEPNTVTYTTIIDGL 109
            +            NLF E   G+   E G+              +C         II   
Sbjct: 700  ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS 759

Query: 110  CKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            CK   V  A+ L  +  KD  ++P + TY  +I G   A     A+ +F+++   G  P+
Sbjct: 760  CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819

Query: 169  VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
            V T+N ++D   K+GK+DE   L   M  H    +  T+N ++ G    G V+ A +L+ 
Sbjct: 820  VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879

Query: 229  S-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
              M       T  +Y  LI+G  K+  +  A  L+  ML  G +P+  I+N L  G  + 
Sbjct: 880  DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939

Query: 288  HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             + + A  LF  M + GV  D  TY   +D LC  G + E +  F  L+      D+  Y
Sbjct: 940  GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999

Query: 348  NSLIDGLCKSGRLEIALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
            N +I+GL KS RLE AL LF  +     + P++ TY+ +I  L   G +++A  ++ +++
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059

Query: 407  ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
               + PNV TF+ LIRG+    +P     +   M
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 176/392 (44%), Gaps = 36/392 (9%)

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVI 175
           K+ +    M  K+ KP++ +   V RG     D + +   F  +     +     T N +
Sbjct: 65  KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++ L  +GK++E + + DLM +  ++ D  TY T+     + G +  A      M   G 
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
               +SY+ LI+   K++    A+ +Y  M+ +G +P +  +++L VGL +   ++    
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  EM+  G+  + +T+   I  L + G I EA E+   +    C  D+  Y  LID LC
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304

Query: 356 KSGRLEIALELFRSLPCGVL-----------------------------------VPNVV 380
            + +L+ A E+F  +  G                                     VP+VV
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++I++  LC  G   +A D    M +  ++PN+ T++ LI G +R++     +EL   M
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           + + V P A    + +D   K+  S+++L +F
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/479 (22%), Positives = 210/479 (43%), Gaps = 75/479 (15%)

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           +PD+ +   +  GL     T  + + F+ +A   G   +V    T  Y  +++ L  +G 
Sbjct: 79  KPDLSSSEEVTRGLKSFPDTDSSFSYFKSVA---GNLNLVHTTETCNY--MLEALRVDGK 133

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +++   +   M+ + IK +  TY ++ +         +A     +M + G   N  ++N 
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF-------------------- 214
           ++  L K+    EA  +   MI  G RP   TY++L+ G                     
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253

Query: 215 ----------CL-----TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
                     C+      G++N A E+   M+  GC   V +Y++LI+  C  ++++ A 
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++ +M +   KPD V + TL     +   ++   + + EM+++G   D  T+   +D L
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC-GV---- 374
           CK G   EA +    +R      ++  YN+LI GL +  RL+ ALELF ++   GV    
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433

Query: 375 ------------------------------LVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
                                         + PN+V  +  +  L   G+  +A+ +F  
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +++  +VP+ +T++M+++ + ++ E  + I+LL +M E    PD  +V+ +++ L K +
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 7/230 (3%)

Query: 19   FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            F+P A T+  LI GL    R+ EA  LF  +  +GC P+   Y  L+NG  +      A 
Sbjct: 887  FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946

Query: 79   NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
             LF+ M     + GV   P+  TY+ ++D LC  G VD+      ++K+  + P+VV Y 
Sbjct: 947  ALFKRMV----KEGV--RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000

Query: 139  SVIRGFCYAKDWNEAKRLFIEM-MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G   +    EA  LF EM   +G+ P++ T+N ++  L   G ++EA ++ + + +
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060

Query: 198  HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
             G+ P+ FT+N L+ G+ L+G+  HA  ++ +M + G      +Y  L N
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G       +  R++K    PD  T++ L+  LC   R+ E    F +L+  G  PDV  Y
Sbjct: 940  GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              ++NGL ++     AL LF EM    G       P+  TY ++I  L   G V++A ++
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRG-----ITPDLYTYNSLILNLGIAGMVEEAGKI 1054

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
              +++   ++PNV T+ ++IRG+  +     A  ++  M+  G  PN  T+
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPDVF 59
            +GRV  G      + +S   PD V +  +I GL    R+ EA  LF +++   G  PD++
Sbjct: 974  VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033

Query: 60   TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            TY +L+  L        A  ++ E+           EPN  T+  +I G    G  + A 
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAG------LEPNVFTFNALIRGYSLSGKPEHAY 1087

Query: 120  ELLLQMKDKNIKPNVVTY 137
             +   M      PN  TY
Sbjct: 1088 AVYQTMVTGGFSPNTGTY 1105


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/424 (31%), Positives = 229/424 (54%), Gaps = 6/424 (1%)

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           E + +T   +V+  C++     A  +  EM            P+ VT+  +ID   + G 
Sbjct: 154 EVNAYTLNIMVHSYCKSLEFDKADTVISEMEK------RCVFPDVVTHNVLIDARFRAGD 207

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           VD A  L+  M +K +KP +VT+ SV++G C  + +++AK +F  M    V P+V +FN+
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++   C+ G+++EA +    M Q GV PD  +++ L+  F   G+++HA      M+ +G
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                  Y+++I G+C+   +  AL +  EM+  G  PDVV +NTL  GL + H++  A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +L +EM+  GV  D  T+ T I G C++G   +A++LF TL   +   D+ AYNSLIDG+
Sbjct: 388 ELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGM 447

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C+ G L  A EL+  +    + PN VTYSI+I   C  GQ+++A     +M     +PN+
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNI 507

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
           +T++ +I+G+ R     K  + L KM + N++PD    + ++    K E    +   F +
Sbjct: 508 MTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNI 567

Query: 475 HEQQ 478
            E++
Sbjct: 568 MEKE 571



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 222/444 (50%), Gaps = 6/444 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L S    +A T   ++   C      +A  + +++      PDV T+  L++   R   
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A+ L + MAN         +P  VT+ +++ GLCK    DKAKE+   M   ++ P+
Sbjct: 208 VDAAIALVDSMANKG------LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPD 261

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V ++  +I GFC   +  EA + + EM  +GV P+VV+F+ ++      GKMD A+  L 
Sbjct: 262 VRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLR 321

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G+ PD   Y  ++ GFC  G ++ A  +   M  +GC   V +Y+ L+NG CK  
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQH 381

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            +  A  L +EM  +G+ PD+    TL  G       E+A +LFD +    +  D   Y 
Sbjct: 382 RLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYN 441

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + IDG+C+ G + +A EL+  +   +   +   Y+ LID  C+ G++E A      +   
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSK 501

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
             +PN++TY+ +I G C  G + K +     M ++ ++P++ITF+ LI G+I+       
Sbjct: 502 GNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGA 561

Query: 434 IELLHKMKEINVMPDASIVSIVVD 457
             + + M++  V PDA   +++++
Sbjct: 562 FNVFNIMEKEMVQPDAVTYNMIIN 585



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 221/447 (49%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     ++  +      P  VTF S++KGLC   R  +A  +F  +      PDV ++
Sbjct: 206 GDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSF 265

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G CR      A+  ++EM     + GV   P+ V+++ +I      G +D A   
Sbjct: 266 NILIGGFCRVGEVEEAMKFYKEMQ----QRGVT--PDVVSFSCLIGLFSTRGKMDHAAAY 319

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK   + P+ V YT VI GFC A   +EA R+  EM+  G  P+VVT+N +++ LCK
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ +A  LL+ M + GV PD  T+ TL+ G+C  G    A +LF ++     +  V +
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G C+  ++  A  L+ +M ++ I P+ V ++ L     E  QVE AF   DEM 
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMV 499

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   +  TY + I G C++G + +  +    +       D+  +N+LI G  K   + 
Sbjct: 500 SKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMH 559

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +F  +   ++ P+ VTY+++I G    G M++A  +F  M  + + P+  T+  LI
Sbjct: 560 GAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLI 619

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G +      +  +L  +M      PD
Sbjct: 620 NGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 232/469 (49%), Gaps = 9/469 (1%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
            V+  + K C  PD VT   LI        +  A AL   +   G +P + T+ +++ GL
Sbjct: 178 TVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGL 237

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C+      A  +F  M            P+  ++  +I G C+ G V++A +   +M+ +
Sbjct: 238 CKHRRFDKAKEVFRAMDQ------CSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQR 291

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            + P+VV+++ +I  F      + A     EM   G+ P+ V + +++   C+ G M EA
Sbjct: 292 GVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA 351

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            R+ D M+  G  PD  TYNTLL+G C   R+  A+EL   M+  G    + +++ LI+G
Sbjct: 352 LRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHG 411

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           YC++   E AL L+  +L + ++PDVV +N+L  G+     + +A +L+D+M    +  +
Sbjct: 412 YCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPN 471

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY   ID  C+ G + EA      +       +I  YNS+I G C+SG ++   +  +
Sbjct: 472 HVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQ 531

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    ++P+++T++ +I G   +  M  A ++F  ME+  V P+ +T++M+I GF    
Sbjct: 532 KMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQG 591

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
              +   +  KM    + PD       + L+  +  + NS  +F +H++
Sbjct: 592 NMEEAGRVFKKMGASGIEPDR---YTYMSLINGHVTAGNSKEAFQLHDE 637



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 185/348 (53%), Gaps = 2/348 (0%)

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           + G+   A+E    +   + + N  T   ++  +C + ++++A  +  EM  + V P+VV
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T NV++D   + G +D A  L+D M   G++P   T+N++L G C   R + AKE+F +M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH-Q 289
           +       V S++ILI G+C+  E+E A+  Y EM  +G+ PDVV  + L +GLF    +
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCL-IGLFSTRGK 312

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           ++ A     EM+  G+  D   Y   I G C+ G + EA+ +   +  L C  D+  YN+
Sbjct: 313 MDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNT 372

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           L++GLCK  RL  A EL   +    + P++ T++ +I G C DG  +KA  LF  +    
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + P+V+ ++ LI G  R  + +K  EL   M    + P+    SI++D
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILID 480



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 153/303 (50%), Gaps = 2/303 (0%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           QP V  F++++    ++ K  EA     L++ H V   A   N LL      G  + A+E
Sbjct: 86  QPQV--FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEE 143

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            +  + S   +   ++ +I+++ YCK+ E + A ++ SEM  + + PDVV HN L    F
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARF 203

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
               V+ A  L D M   G+     T+ + + GLCK+    +A E+F  +       D+R
Sbjct: 204 RAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVR 263

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           ++N LI G C+ G +E A++ ++ +    + P+VV++S +IG     G+MD A     +M
Sbjct: 264 SFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM 323

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           +   +VP+ + + M+I GF R    S+ + +  +M  +  +PD    + +++ L K    
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRL 383

Query: 466 LNS 468
           L++
Sbjct: 384 LDA 386



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 162/330 (49%)

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           +E++  +   +  P    +  +IR +  ++   EA   F  ++D  V       N ++  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAA 131

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L + G    A     L++      +A+T N ++  +C +   + A  +   ME       
Sbjct: 132 LSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPD 191

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V ++++LI+   +  +++ A++L   M +KG+KP +V  N++  GL +  + ++A ++F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFR 251

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M +  VA D  ++   I G C+ G + EA++ +  ++      D+ +++ LI      G
Sbjct: 252 AMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRG 311

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           +++ A    R +    LVP+ V Y+++IGG C  G M +A  +  +M     +P+V+T++
Sbjct: 312 KMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYN 371

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            L+ G  + +      ELL++MKE  V PD
Sbjct: 372 TLLNGLCKQHRLLDAEELLNEMKERGVTPD 401



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/235 (20%), Positives = 98/235 (41%), Gaps = 39/235 (16%)

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           S +L+    P   + + L     +  +   AF+ F  +  + V          +  L + 
Sbjct: 76  SSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRA 135

Query: 323 GYIVEAVELFHTLRILKCEFDIRAY--NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           G+   A E +    +L  + ++ AY  N ++   CKS   + A  +   +    + P+VV
Sbjct: 136 GWPHLAEEAYRL--VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 381 TYSIMIG-----------------------------------GLCNDGQMDKARDLFLDM 405
           T++++I                                    GLC   + DKA+++F  M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           ++ +V P+V +F++LI GF R+ E  + ++   +M++  V PD    S ++ L +
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFS 308


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 228/430 (53%), Gaps = 11/430 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M R+     VL R+    F+PD VT+  +I  LC+  ++  A  +  +L    C+P V T
Sbjct: 171 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 230

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+           AL L +EM +         +P+  TY TII G+CKEG VD+A E
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTIIRGMCKEGMVDRAFE 284

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++  ++ K  +P+V++Y  ++R       W E ++L  +M  +   PNVVT+++++  LC
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           ++GK++EA  LL LM + G+ PDA++Y+ L+  FC  GR++ A E   +M S GC   + 
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++   CKN + + AL ++ ++   G  P+   +NT+F  L+      RA  +  EM
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSG 358
             NG+  D  TY + I  LC+ G + EA EL   +R   CEF   +  YN ++ G CK+ 
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR--SCEFHPSVVTYNIVLLGFCKAH 522

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R+E A+ +  S+      PN  TY+++I G+   G   +A +L  D+     +    +F 
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY-SFK 581

Query: 419 MLIRGFIRIN 428
            L R F  +N
Sbjct: 582 RLHRTFPLLN 591



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 229/448 (51%), Gaps = 7/448 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +++  + PD +  T LIKG      I +A  +   L  FG +PDVF Y  L+NG C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           + +    A  + + M + +        P+TVTY  +I  LC  G +D A ++L Q+   N
Sbjct: 170 KMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +P V+TYT +I         +EA +L  EM+ +G++P++ T+N I+  +CK G +D A 
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            ++  +   G  PD  +YN LL      G+    ++L   M S  C   V +YSILI   
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C++ +IE A++L   M  KG+ PD   ++ L        +++ A +  + M  +G   D 
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y T +  LCKNG   +A+E+F  L  + C  +  +YN++   L  SG    AL +   
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P+ +TY+ MI  LC +G +D+A +L +DM      P+V+T+++++ GF + + 
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVD 457
               I +L  M      P+ +  +++++
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIE 551



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 194/393 (49%), Gaps = 7/393 (1%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR+ + I +L+L E M            P+ +  T +I G      + KA  ++ ++ +K
Sbjct: 100 CRSGNYIESLHLLETMVRKG------YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEK 152

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             +P+V  Y ++I GFC     ++A R+   M  +   P+ VT+N+++  LC  GK+D A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++L+ ++    +P   TY  L++   L G V+ A +L   M S G K  +F+Y+ +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK   ++ A  +   +  KG +PDV+ +N L   L    + E   KL  +M       +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY   I  LC++G I EA+ L   ++      D  +Y+ LI   C+ GRL++A+E   
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           ++     +P++V Y+ ++  LC +G+ D+A ++F  + E    PN  +++ +        
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  + + ++ +M    + PD    + ++  L +
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 161/318 (50%), Gaps = 1/318 (0%)

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C + ++ E+  L   M+ +G  P+V+    ++        + +A R+++++ + G +PD 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
           F YN L++GFC   R++ A  +   M S        +Y+I+I   C   +++ AL + ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           +LS   +P V+ +  L         V+ A KL DEM   G+  D +TY T I G+CK G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A E+   L +  CE D+ +YN L+  L   G+ E   +L   +      PNVVTYSI
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  LC DG++++A +L   M+E  + P+  ++D LI  F R       IE L  M    
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 445 VMPDASIVSIVVDLLAKN 462
            +PD    + V+  L KN
Sbjct: 399 CLPDIVNYNTVLATLCKN 416


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/461 (32%), Positives = 237/461 (51%), Gaps = 6/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L ++ K    P+ VT+  L+ GL     + +A  L  ++   G E   +TY
Sbjct: 204 GKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTY 263

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G C       A  L EEM +     G V  P  VTY TI+ GLCK G V  A++L
Sbjct: 264 DPLIRGYCEKGQLDEASRLGEEMLSR----GAV--PTLVTYNTIMYGLCKWGRVSDARKL 317

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +KN+ P++V+Y ++I G+    +  EA  LF E+  +G+ P+VVT+N ++D LC+
Sbjct: 318 LDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCR 377

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A RL D MI+HG  PD FT+  L+ GFC  G +  AKELF  M + G +   F+
Sbjct: 378 MGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFA 437

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y   I G  K  +   A  +  EML++G  PD++ +N    GL ++  ++ A +L  +M 
Sbjct: 438 YITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 497

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG+  D  TY + I      G++ +A  +F  +        +  Y  LI      GRL+
Sbjct: 498 YNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLK 557

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A+  F  +    + PNV+TY+ +I GLC   +MD+A   F +M+   + PN  T+ +LI
Sbjct: 558 LAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILI 617

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                +    + + L   M +  + PD+   S ++  L K+
Sbjct: 618 NENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKD 658



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 212/420 (50%), Gaps = 37/420 (8%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           ++++  E+ N   E G+   P  VTY T++D  CK+G V +A +LLLQM+     PN VT
Sbjct: 170 SIDVAREVYNVMVECGI--RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVT 227

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y  ++ G  ++ +  +AK L  EM+  G++ +  T++ ++   C+ G++DEASRL + M+
Sbjct: 228 YNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEML 287

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G  P   TYNT++ G C  GRV+ A++L   M +      + SY+ LI GY +   I 
Sbjct: 288 SRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG 347

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L++E+  +G+ P VV +NTL  GL  +  ++ A +L DEM ++G   D +T+   +
Sbjct: 348 EAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILV 407

Query: 317 DGLCKNGYIVEAVELFHTL---------------------------------RILKCEF- 342
            G CK G +  A ELF  +                                  +L   F 
Sbjct: 408 RGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFP 467

Query: 343 -DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D+  YN  IDGL K G L+ A EL + +    LVP+ VTY+ +I      G + KAR +
Sbjct: 468 PDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAV 527

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           FL+M    + P+V+T+ +LI  +         I    +M E  V P+    + +++ L K
Sbjct: 528 FLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCK 587



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 201/372 (54%), Gaps = 6/372 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRVS    +L  ++     PD V++ +LI G      I EA  LF +LR  G  P V TY
Sbjct: 309 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTY 368

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++GLCR     VA+ L +EM     +      P+  T+T ++ G CK G +  AKEL
Sbjct: 369 NTLIDGLCRMGDLDVAMRLKDEMIKHGPD------PDVFTFTILVRGFCKLGNLPMAKEL 422

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M ++ ++P+   Y + I G     D ++A  +  EM+ +G  P+++T+NV +D L K
Sbjct: 423 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 482

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + EAS L+  M+ +G+ PD  TY +++    + G +  A+ +F+ M S G   +V +
Sbjct: 483 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVT 542

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++LI+ Y     ++ A+  + EM  KG+ P+V+ +N L  GL ++ ++++A+K F EMQ
Sbjct: 543 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQ 602

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G++ + +TY   I+  C  G+  EA+ L+  +   + + D   +++L+  L K  +  
Sbjct: 603 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSH 662

Query: 362 IALELFRSLPCG 373
           +   L   +  G
Sbjct: 663 VVRHLENVIAAG 674



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 189/389 (48%), Gaps = 8/389 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L     P  VT+ +++ GLC   R+ +A  L   +      PD+ +Y TL+ G  R  +
Sbjct: 286 MLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGN 345

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  LF E+       G+V  P+ VTY T+IDGLC+ G +D A  L  +M      P+
Sbjct: 346 IGEAFLLFAELRFR----GLV--PSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPD 399

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF-NVIMDELCKNGKMDEASRLL 192
           V T+T ++RGFC   +   AK LF EM+++G+QP+   +   I+ EL K G   +A  + 
Sbjct: 400 VFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL-KLGDPSKAFGMQ 458

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M+  G  PD  TYN  +DG    G +  A EL   M   G      +Y+ +I+ +   
Sbjct: 459 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 518

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +  A +++ EMLSKGI P VV +  L        +++ A   F EM   GV  +  TY
Sbjct: 519 GHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 578

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+GLCK   + +A + F  ++      +   Y  LI+  C  G  + AL L++ +  
Sbjct: 579 NALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 638

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
             + P+  T+S ++  L  D +    R L
Sbjct: 639 REIQPDSCTHSALLKHLNKDYKSHVVRHL 667



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 29/310 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F++   +      P  VT+ +LI GLC    +  A  L  ++   G +PDVFT
Sbjct: 343 LGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFT 402

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGN-------------GE---------FGVVCE-- 96
           +T LV G C+  +  +A  LF+EM N               GE         FG+  E  
Sbjct: 403 FTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML 462

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+ +TY   IDGL K G + +A EL+ +M    + P+ VTYTS+I     A    
Sbjct: 463 ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLR 522

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A+ +F+EM+ +G+ P+VVT+ V++      G++  A      M + GV P+  TYN L+
Sbjct: 523 KARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALI 582

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           +G C   +++ A + F  M++ G     ++Y+ILIN  C     + AL LY +ML + I+
Sbjct: 583 NGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQ 642

Query: 272 PDVVIHNTLF 281
           PD   H+ L 
Sbjct: 643 PDSCTHSALL 652



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 164/373 (43%), Gaps = 80/373 (21%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLD------------------------------ 193
           G + + +T+ VI+D L +NG M  A  +++                              
Sbjct: 76  GFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSML 135

Query: 194 --------LMIQHGVRPDAFTYNTLLDGFCLTGR---VNHAKELFVSMESMGCKHTVFSY 242
                    M+  G+ PD    N +L    L  R   ++ A+E++  M   G + TV +Y
Sbjct: 136 EKCLLVFYKMVSKGMLPDLKNCNRVLR--LLRDRDSSIDVAREVYNVMVECGIRPTVVTY 193

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + +++ +CK  +++ AL L  +M   G  P+ V +N L  GL    ++E+A +L  EM R
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVEL---------------FHTLRILKCEF----- 342
            G+    +TY   I G C+ G + EA  L               ++T+    C++     
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSD 313

Query: 343 ---------------DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
                          D+ +YN+LI G  + G +  A  LF  L    LVP+VVTY+ +I 
Sbjct: 314 ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLID 373

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           GLC  G +D A  L  +M ++   P+V TF +L+RGF ++       EL  +M    + P
Sbjct: 374 GLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQP 433

Query: 448 D--ASIVSIVVDL 458
           D  A I  IV +L
Sbjct: 434 DRFAYITRIVGEL 446


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/447 (31%), Positives = 233/447 (52%), Gaps = 7/447 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           + C+ P  VTF  LI GL  +  + +A  L  ++   G     +TY  L+ G C+    +
Sbjct: 266 RGCY-PSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLV 324

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            AL L+EEM       GV   P   ++ TI+ G CKEG +  A++ L  M  KN+ P+++
Sbjct: 325 EALALWEEMVTR----GV--SPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDII 378

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +Y ++I GFC   +  EA  L  E+  + +  N+VT+N ++D LC+ G ++ A +L + M
Sbjct: 379 SYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDM 438

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           I  G+ PD  TY  L++G C  G +  AKE F  M  +G     F+Y+  I G  K  + 
Sbjct: 439 INRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDT 498

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  L  EML+KG  PDV+ +N    GL ++  +E A +L  +M R+G   D  TY +F
Sbjct: 499 AKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSF 558

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           +    +NG++ E  E+F+ +        +  Y  LI     +GRL+ A+  F  +    +
Sbjct: 559 MHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGV 618

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           VPNV+TY+++I G C   +MD+A   F++M+E  + PN  T+ +LI     + +  + + 
Sbjct: 619 VPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALR 678

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKN 462
           L  +M    + PD+     ++  L K+
Sbjct: 679 LYAQMLGKRIRPDSCTHGALLKKLDKD 705



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 243/485 (50%), Gaps = 41/485 (8%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
            +V  +++++ F PD      ++K L  ++ +++A  ++  +  +G  P V TY T+++ 
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
            C+      AL+L  +M     E G  C P+ VT+  +I+GL K+G + +AK L+ +M  
Sbjct: 247 FCKGGEVQRALDLVPKMQ----ERG--CYPSEVTFNVLINGLSKKGELQQAKGLIQEMAK 300

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
             ++ +  TY  +I G+C      EA  L+ EM+ +GV P V + N IM   CK GKM +
Sbjct: 301 AGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSD 360

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A + L  M++  + PD  +YNTL+ GFC  G +  A  L   +        + +Y+ LI+
Sbjct: 361 ARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLID 420

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL--------------------------- 280
           G C+  ++E AL L  +M+++GI PDVV +  L                           
Sbjct: 421 GLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAP 480

Query: 281 --------FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
                    VG  ++    +AFKL +EM   G   D  TY  F++GLCK G + EA EL 
Sbjct: 481 DQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELL 540

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +       D   Y S +    ++G L    E+F  +      P VVTY+++I     +
Sbjct: 541 QKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALN 600

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G++D A   FL+M+E  VVPNVIT+++LI GF ++ +  +  +   +M+E  + P+    
Sbjct: 601 GRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTY 660

Query: 453 SIVVD 457
           +I+++
Sbjct: 661 TILIN 665



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 194/369 (52%), Gaps = 7/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S     L  +LK    PD +++ +LI G C    I EA  L  +LR      ++ TY
Sbjct: 356 GKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTY 415

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++GLCR      AL L E+M N          P+ VTYT +++G CK G +  AKE 
Sbjct: 416 NTLIDGLCRLGDLETALKLKEDMINRG------IHPDVVTYTVLVNGACKLGNMLMAKEF 469

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + P+   YT+ I G     D  +A +L  EM+ +G  P+V+T+NV ++ LCK
Sbjct: 470 FDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCK 529

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++EA  LL  MI+ G  PD  TY + +      G +   +E+F  M S G   TV +
Sbjct: 530 LGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVT 589

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++LI+ +  N  ++ A++ + EM  KG+ P+V+ +N L  G  ++ ++++A K F EMQ
Sbjct: 590 YTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQ 649

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  + +TY   I+  C  G   EA+ L+  +   +   D   + +L+  L K  +++
Sbjct: 650 EKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQ 709

Query: 362 IALELFRSL 370
            A++   SL
Sbjct: 710 -AVQFIESL 717



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 164/310 (52%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A  ++  M + G++P V T+N ++   CK G++  A  L+  M + G  P   T+N L+
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           +G    G +  AK L   M   G + + ++Y+ LI GYCK   +  AL+L+ EM+++G+ 
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P V  HNT+  G  +  ++  A +   +M +  +  D  +Y T I G C+ G I EA  L
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
              LR     F+I  YN+LIDGLC+ G LE AL+L   +    + P+VVTY++++ G C 
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACK 459

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G M  A++ F +M    + P+   +   I G +++ + +K  +L  +M      PD   
Sbjct: 460 LGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVIT 519

Query: 452 VSIVVDLLAK 461
            ++ V+ L K
Sbjct: 520 YNVFVNGLCK 529



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 198/407 (48%), Gaps = 6/407 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PDV     ++  L   +  + AL ++  M    GE+G+   P   TY T++   CK G V
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMM----GEYGI--RPTVTTYNTMLHSFCKGGEV 253

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            +A +L+ +M+++   P+ VT+  +I G     +  +AK L  EM   G++ +  T+N +
Sbjct: 254 QRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPL 313

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +   CK G + EA  L + M+  GV P   ++NT++ GFC  G+++ A++    M     
Sbjct: 314 ICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNL 373

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + SY+ LI G+C+   I  A  L  E+  + +  ++V +NTL  GL  +  +E A K
Sbjct: 374 MPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALK 433

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L ++M   G+  D  TY   ++G CK G ++ A E F  +  +    D  AY + I G  
Sbjct: 434 LKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGEL 493

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K G    A +L   +      P+V+TY++ + GLC  G +++A +L   M  +  VP+ +
Sbjct: 494 KLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHV 553

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T+   +   +      +  E+ + M      P     ++++   A N
Sbjct: 554 TYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALN 600



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 158/320 (49%), Gaps = 29/320 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F++L  +     + + VT+ +LI GLC    +  A  L   +   G  PDV T
Sbjct: 390 LGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVT 449

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMAN---------------GNGEFGVVCE--------- 96
           YT LVNG C+  + ++A   F+EM +               G  + G   +         
Sbjct: 450 YTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEML 509

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+ +TY   ++GLCK G +++A ELL +M      P+ VTYTS +          
Sbjct: 510 TKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLR 569

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           E + +F +M+ +G  P VVT+ V++     NG++D A      M + GV P+  TYN L+
Sbjct: 570 EGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLI 629

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           +GFC   +++ A + F+ M+  G     ++Y+ILIN  C   + + AL LY++ML K I+
Sbjct: 630 NGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIR 689

Query: 272 PDVVIHNTLFVGLFEIHQVE 291
           PD   H  L   L + ++V+
Sbjct: 690 PDSCTHGALLKKLDKDYKVQ 709



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 7/201 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +L ++++    PD VT+TS +        + E   +F  +   G  P V T
Sbjct: 530 LGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVT 589

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++          A+  F EM     E GVV  PN +TY  +I+G CK   +D+A +
Sbjct: 590 YTVLIHAHALNGRLDWAMAYFLEMQ----EKGVV--PNVITYNVLINGFCKVRKMDQACK 643

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
             ++M++K I PN  TYT +I   C    W EA RL+ +M+ + ++P+  T   ++ +L 
Sbjct: 644 FFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLD 703

Query: 181 KNGKMDEASRLLDLMIQHGVR 201
           K+ K+ +A + ++ +I  G R
Sbjct: 704 KDYKV-QAVQFIESLILDGDR 723



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 13/258 (5%)

Query: 194 LMIQHGVRPDAFTYNTLLDGF---CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           ++ Q G +   + +  +L      CL        E  +S E  G         +LI GY 
Sbjct: 129 VLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEMYGI------VDVLIGGYL 182

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
             +     L ++ +M+     PDV   N +   L + + + +A +++  M   G+     
Sbjct: 183 NYQ----CLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVT 238

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY T +   CK G +  A++L   ++   C      +N LI+GL K G L+ A  L + +
Sbjct: 239 TYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEM 298

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               L  +  TY+ +I G C  G + +A  L+ +M    V P V + + ++ GF +  + 
Sbjct: 299 AKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKM 358

Query: 431 SKVIELLHKMKEINVMPD 448
           S   + L  M + N+MPD
Sbjct: 359 SDARQQLSDMLKKNLMPD 376


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 243/483 (50%), Gaps = 42/483 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V  ++++    PD    + ++   C + ++ EAA    K+   G EP++ TY
Sbjct: 205 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 264

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NG         A  + + M+    E GV    N VTYT +I G CK+  +D+A+++
Sbjct: 265 HSLINGYVSLGDVEAAKGVLKFMS----EKGV--SRNVVTYTLLIKGYCKQCKMDEAEKV 318

Query: 122 LLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  M+++  + P+   Y  +I G+C     ++A RL  EM+  G++ N+   N +++  C
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 378

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ EA  ++  M+   ++PD+++YNTLLDG+C  G  + A  L   M   G + TV 
Sbjct: 379 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 438

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+ G C+    + AL ++  M+ +G+ PD V ++TL  GLF++   E A  L+ ++
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS--- 357
              G      T+ T I GLCK G +VEA E+F  ++ L C  D   Y +LIDG CK+   
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 358 -------GRLE-----IALELFRSLPCGV--------------------LVPNVVTYSIM 385
                  G +E      ++E++ SL  G+                    L PN+VTY  +
Sbjct: 559 GQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 618

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G C +G +DKA   + +M EN +  N+I    ++ G  R+    +   L+ KM +   
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678

Query: 446 MPD 448
            PD
Sbjct: 679 FPD 681



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 239/528 (45%), Gaps = 73/528 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  +L+     +     SLI G C    I EA  + T++  +  +PD ++Y
Sbjct: 346 GKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSY 405

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G CR  HT  A NL ++M     + G+  EP  +TY T++ GLC+ G  D A ++
Sbjct: 406 NTLLDGYCREGHTSEAFNLCDKML----QEGI--EPTVLTYNTLLKGLCRVGAFDDALQI 459

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  + + P+ V Y++++ G    +++  A  L+ +++ +G   + +TFN ++  LCK
Sbjct: 460 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 519

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA------------------ 223
            GKM EA  + D M   G  PD  TY TL+DG+C    V  A                  
Sbjct: 520 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEM 579

Query: 224 -----------------KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                             +L   M   G    + +Y  LI+G+CK   ++ A S Y EM 
Sbjct: 580 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD------------------ 308
             G+  +++I +T+  GL+ + +++ A  L  +M  +G   D                  
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 699

Query: 309 --------------TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                            Y   I GLCK G + +A   F  L +     D   Y +LI G 
Sbjct: 700 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
             +G ++ A  L   +    LVPN+VTY+ +I GLC    +D+A+ LF  + +  + PNV
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 819

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +T++ LI G+ +I       +L  KM E  + P     S +++ L K+
Sbjct: 820 VTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKH 867



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 230/451 (50%), Gaps = 22/451 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           IL   FT   +TF ++I GLC   +++EA  +F K++  GC PD  TY TL++G C+ S+
Sbjct: 498 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASN 557

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  +   M            P+   Y ++I GL K   + +  +LL +M  + + PN
Sbjct: 558 VGQAFKVKGAMEREP------ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPN 611

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           +VTY ++I G+C     ++A   + EM + G+  N++  + ++  L + G++DEA+ L+ 
Sbjct: 612 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQ 671

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHA--KELFVSMESMGCKHTVFS----YSILIN 247
            M+ HG  PD   +        L   + +A  +++  S++   CK  +      Y+I I 
Sbjct: 672 KMVDHGFFPDHECF--------LKSDIRYAAIQKIADSLDE-SCKTFLLPNNIVYNIAIA 722

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G CK  +++ A   +S +  KG  PD   + TL  G      V+ AF+L DEM R G+  
Sbjct: 723 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVP 782

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  TY   I+GLCK+  +  A  LFH L       ++  YN+LIDG CK G ++ A +L 
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 842

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    + P+VVTYS +I GLC  G ++++  L   M +  V   +I +  L++G+IR 
Sbjct: 843 DKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRS 902

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            E  K I  L+ M  I  +   +I    VDL
Sbjct: 903 GEMQK-IHKLYDMMHIRCLSTTAISHKQVDL 932



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 228/446 (51%), Gaps = 9/446 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+P    F  ++K    +     A  +F  +   G  P + +  +L+N L +   T  A 
Sbjct: 154 FSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 211

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            ++++M       G+V  P+    + +++  CK+G VD+A   + +M++  ++PN+VTY 
Sbjct: 212 YVYQQMI----RVGIV--PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 265

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I G+    D   AK +   M ++GV  NVVT+ +++   CK  KMDEA ++L  M + 
Sbjct: 266 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325

Query: 199 G-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
             + PD   Y  L+DG+C TG+++ A  L   M  +G K  +F  + LINGYCK  EI  
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  + + M+   +KPD   +NTL  G         AF L D+M + G+     TY T + 
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLC+ G   +A++++H +       D   Y++L+DGL K    E A  L++ +       
Sbjct: 446 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 505

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + +T++ MI GLC  G+M +A ++F  M++    P+ IT+  LI G+ + +   +  ++ 
Sbjct: 506 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVK 565

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNE 463
             M+   + P   + + ++  L K+ 
Sbjct: 566 GAMEREPISPSIEMYNSLISGLFKSR 591



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 229/505 (45%), Gaps = 61/505 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V+ R++     PD+ ++ +L+ G C E    EA  L  K+   G EP V TY
Sbjct: 381 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440

Query: 62  TTLVNGLCRTSHTIVALNLFE----------------------EMANGNGEFGVVCE--- 96
            TL+ GLCR      AL ++                       +M N  G   +  +   
Sbjct: 441 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                + +T+ T+I GLCK G + +A+E+  +MKD    P+ +TY ++I G+C A +  +
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 560

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A ++   M  + + P++  +N ++  L K+ ++ E + LL  M   G+ P+  TY  L+D
Sbjct: 561 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 620

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C  G ++ A   +  M   G    +   S +++G  +   I+ A  L  +M+  G  P
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680

Query: 273 DV--------------------------------VIHNTLFVGLFEIHQVERAFKLFDEM 300
           D                                 +++N    GL +  +V+ A + F  +
Sbjct: 681 DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 740

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D +TY T I G    G + EA  L   +       +I  YN+LI+GLCKS  +
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  LF  L    L PNVVTY+ +I G C  G MD A  L   M E  + P+V+T+  L
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860

Query: 421 IRGFIRINEPSKVIELLHKMKEINV 445
           I G  +  +  + ++LL++M +  V
Sbjct: 861 INGLCKHGDIERSMKLLNQMIKAGV 885



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 180/388 (46%), Gaps = 20/388 (5%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---NIKPNVV--TYTSVIRGFCYAKD- 149
            PN  +Y  ++  L +    D+ +  L Q+ D      + NV+      V R F ++   
Sbjct: 99  RPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTV 158

Query: 150 -------------WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
                           A  +F  M   G  P++ + N +++ L KNG+   A  +   MI
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G+ PD F  + +++ FC  G+V+ A      ME++G +  + +Y  LINGY    ++E
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG-VAADTWTYRTF 315
            A  +   M  KG+  +VV +  L  G  +  +++ A K+   MQ    +  D   Y   
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           IDG C+ G I +AV L   +  L  + ++   NSLI+G CK G +  A  +   +    L
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+  +Y+ ++ G C +G   +A +L   M +  + P V+T++ L++G  R+      ++
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + H M +  V PD    S ++D L K E
Sbjct: 459 IWHLMMKRGVAPDEVGYSTLLDGLFKME 486



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 9/277 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+    +++ +++   F PD   F        A  +I  A +L    + F   P+   
Sbjct: 660 LGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKI--ADSLDESCKTF-LLPNNIV 716

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y   + GLC+T     A   F  ++      G V  P+  TY T+I G    G VD+A  
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLK----GFV--PDNFTYCTLIHGYSAAGNVDEAFR 770

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + + PN+VTY ++I G C +++ + A+RLF ++  +G+ PNVVT+N ++D  C
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 830

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G MD A +L D MI+ G+ P   TY+ L++G C  G +  + +L   M   G    + 
Sbjct: 831 KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLI 890

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
            Y  L+ GY ++ E++    LY  M  + +    + H
Sbjct: 891 EYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 233/459 (50%), Gaps = 7/459 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  +++++  +P  VT   LI G C   R+ +A     +    G EPD  TY
Sbjct: 246 GSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTY 305

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T V+GLC+  H   AL + + M     +      P+  TY T+I+ L K G +D+AK +
Sbjct: 306 NTFVHGLCQNGHVSHALKVMDLMLQEGHD------PDVFTYNTVINCLSKNGELDEAKGI 359

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + QM D+   P+  T+ ++I          EA  L  E+  +G+ P+V TFN++++ LCK
Sbjct: 360 VNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCK 419

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G      RL + M   G  PD  TYN L+D  C  G++ +A +L   MES GC  +  +
Sbjct: 420 VGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVT 479

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+  CK   IE A  ++ +M ++GI    V  NTL  GL +  +++ A +L ++M 
Sbjct: 480 YNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 539

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+  +  TY + +   CK G I +A ++  T+     E D+  Y +LI+GLCK+GR +
Sbjct: 540 KEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQ 599

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL+L R +    + P    Y+ +I  L     +  A +LF +M E    P+ +T+ ++ 
Sbjct: 600 VALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVF 659

Query: 422 RGFIRINEPSK-VIELLHKMKEINVMPDASIVSIVVDLL 459
           R   R   P K   + L +M     MP+ S   ++ + L
Sbjct: 660 RSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 698



 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 138/439 (31%), Positives = 214/439 (48%), Gaps = 6/439 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT  +LIK LC   ++  A  +  ++   G  PD  T+TTL+ G         AL +
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M          C P  VT   +I+G CK G V+ A   + Q      +P+ VTY + 
Sbjct: 255 KAKMMEAG------CSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTF 308

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C     + A ++   M+ +G  P+V T+N +++ L KNG++DEA  +++ M+  G 
Sbjct: 309 VHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 368

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T+NTL+       R+  A +L   +   G    V++++ILIN  CK  +    + 
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 428

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM S G  PD V +N L   L  + ++  A  L +EM+ NG    T TY T ID LC
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   I EA E+F  +           +N+LIDGLCK+ R++ A EL   +    L PN +
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNI 548

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++   C  G + KA D+   M  N    +V+T+  LI G  +       ++LL  M
Sbjct: 549 TYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 608

Query: 441 KEINVMPDASIVSIVVDLL 459
           +   + P     + V+  L
Sbjct: 609 RIKGIRPTPKAYNPVIQSL 627



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 217/428 (50%), Gaps = 7/428 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGRV      + + +   F PD VT+ + + GLC    +  A  +   +   G +PDVFT
Sbjct: 280 MGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFT 339

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++N L +      A  +  +M +        C P+T T+ T+I  L  +  +++A +
Sbjct: 340 YNTVINCLSKNGELDEAKGIVNQMVDRG------CLPDTTTFNTLIVALSSQNRLEEALD 393

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++  K + P+V T+  +I   C   D +   RLF EM   G  P+ VT+N+++D LC
Sbjct: 394 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLC 453

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GK+  A  LL+ M  +G      TYNT++D  C   R+  A+E+F  M++ G   +  
Sbjct: 454 SMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAV 513

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LI+G CK K I+ A  L  +M+ +G++P+ + +N++     +   +++A  + + M
Sbjct: 514 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM 573

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D  TY T I+GLCK G    A++L   +RI       +AYN +I  L +   L
Sbjct: 574 TANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 633

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCN-DGQMDKARDLFLDMEENAVVPNVITFDM 419
             AL LFR +      P+ +TY I+   LC   G + +A D  ++M     +P   +F M
Sbjct: 634 RDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRM 693

Query: 420 LIRGFIRI 427
           L  G + +
Sbjct: 694 LAEGLLNL 701



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 221/454 (48%), Gaps = 8/454 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V    ++L  +      PD  TFT+L++G   E  I  A  +  K+   GC P   T  
Sbjct: 212 QVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVN 271

Query: 63  TLVNGLCRTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            L+NG C+      AL   + E+A+G        EP+ VTY T + GLC+ G V  A ++
Sbjct: 272 VLINGYCKMGRVEDALGYIQQEIADG-------FEPDQVTYNTFVHGLCQNGHVSHALKV 324

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M  +   P+V TY +VI       + +EAK +  +M+D+G  P+  TFN ++  L  
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSS 384

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA  L   +   G+ PD +T+N L++  C  G  +    LF  M+S GC     +
Sbjct: 385 QNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVT 444

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+  C   ++  AL L +EM S G     V +NT+   L +  ++E A ++FD+M 
Sbjct: 445 YNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMD 504

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G++    T+ T IDGLCK   I +A EL   +     + +   YNS++   CK G ++
Sbjct: 505 AQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIK 564

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++  ++       +VVTY  +I GLC  G+   A  L   M    + P    ++ +I
Sbjct: 565 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVI 624

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           +   R N     + L  +M E+   PDA    IV
Sbjct: 625 QSLFRRNNLRDALNLFREMTEVGEPPDALTYKIV 658



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 201/398 (50%), Gaps = 6/398 (1%)

Query: 51  VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC 110
            FG + D   +  L+N L   S   +  +++ EM  G G      +P+ VT  T+I  LC
Sbjct: 155 TFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMT-GRG-----IQPDVVTLNTLIKALC 208

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           +   V  A  +L +M    + P+  T+T++++GF        A R+  +MM+ G  P  V
Sbjct: 209 RAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGV 268

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T NV+++  CK G++++A   +   I  G  PD  TYNT + G C  G V+HA ++   M
Sbjct: 269 TVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLM 328

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G    VF+Y+ +IN   KN E++ A  + ++M+ +G  PD    NTL V L   +++
Sbjct: 329 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRL 388

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E A  L  E+   G++ D +T+   I+ LCK G     + LF  ++   C  D   YN L
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNIL 448

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           ID LC  G+L  AL+L   +       + VTY+ +I  LC   ++++A ++F  M+   +
Sbjct: 449 IDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGI 508

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             + +TF+ LI G  +        EL+ +M +  + P+
Sbjct: 509 SRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPN 546



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 181/350 (51%), Gaps = 5/350 (1%)

Query: 116 DKAKELLLQMKDKN---IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           D A +L+L   D +   ++ + V +  ++            + ++ EM  +G+QP+VVT 
Sbjct: 141 DDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTL 200

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++  LC+  ++  A  +L+ M  HGV PD  T+ TL+ GF   G +  A  +   M  
Sbjct: 201 NTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMME 260

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            GC  T  + ++LINGYCK   +E AL    + ++ G +PD V +NT   GL +   V  
Sbjct: 261 AGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSH 320

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A K+ D M + G   D +TY T I+ L KNG + EA  + + +    C  D   +N+LI 
Sbjct: 321 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 380

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            L    RLE AL+L R L    L P+V T++I+I  LC  G       LF +M+ +   P
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV-SIVVDLLAK 461
           + +T+++LI     + +    ++LL++M E N  P +++  + ++D L K
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEM-ESNGCPRSTVTYNTIIDALCK 489



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 203/443 (45%), Gaps = 3/443 (0%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P +  +  +++ L           L  ++R  G +       + V    R      A+
Sbjct: 85  FAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAV 144

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L     + N  FGV  + +TV +  +++ L +   +   + +  +M  + I+P+VVT  
Sbjct: 145 DLVLNQLD-NDTFGV--QADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLN 201

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I+  C A     A  +  EM   GV P+  TF  +M    + G ++ A R+   M++ 
Sbjct: 202 TLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEA 261

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  P   T N L++G+C  GRV  A        + G +    +Y+  ++G C+N  +  A
Sbjct: 262 GCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHA 321

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L +   ML +G  PDV  +NT+   L +  +++ A  + ++M   G   DT T+ T I  
Sbjct: 322 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA 381

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L     + EA++L   L +     D+  +N LI+ LCK G   + + LF  +      P+
Sbjct: 382 LSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPD 441

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VTY+I+I  LC+ G++  A DL  +ME N    + +T++ +I    +     +  E+  
Sbjct: 442 EVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFD 501

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
           +M    +   A   + ++D L K
Sbjct: 502 QMDAQGISRSAVTFNTLIDGLCK 524



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 38/299 (12%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P+   +  I+ +L   G  D    L+  M + G +  A    + ++ +    R + A +L
Sbjct: 87  PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDL 146

Query: 227 FVSM---ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            ++    ++ G +     ++ L+N   +  +++   S+Y+EM  +GI+PDVV  NTL   
Sbjct: 147 VLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKA 206

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L   HQV  A  + +EM  +GVA D  T+ T + G  + G I               E  
Sbjct: 207 LCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSI---------------EAA 251

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +R    +++  C                     P  VT +++I G C  G+++ A     
Sbjct: 252 LRVKAKMMEAGCS--------------------PTGVTVNVLINGYCKMGRVEDALGYIQ 291

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               +   P+ +T++  + G  +    S  ++++  M +    PD    + V++ L+KN
Sbjct: 292 QEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN 350


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/451 (31%), Positives = 225/451 (49%), Gaps = 9/451 (1%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTYTTLVN 66
            V   +L+    P   T+ +L+   C   R+ +A AL   +  R  GC P+  TY  ++N
Sbjct: 215 AVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVIN 274

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GL R      A  L + M           + +  TY  +I GL    FV+KA  LLL+M+
Sbjct: 275 GLARKGELEKAAQLVDIMRLSK-------KASAFTYNPLITGLLARDFVEKAGALLLEME 327

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++ I P VVTY ++I G     +   A+  F EM  +G+ P+++T+N +++  CK G + 
Sbjct: 328 NEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLK 387

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A  L   + + G+ P   TYN L+DG+C  G +  A+ L   M    C   V +Y+IL+
Sbjct: 388 QALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILM 447

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           NG C  + +      + EMLSKG++PD   +NT       I  +  AF+L +EM   G++
Sbjct: 448 NGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGIS 507

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           +DT TY   IDGLCK G + +A  L+  +       D   Y  LI   C+ GRL  A  +
Sbjct: 508 SDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNI 567

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  +    L P+VVTY+I I   C  G +  A   F  M E  V PN +T+++L+    R
Sbjct: 568 FDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCR 627

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +       +  H+M E  ++P+    ++++D
Sbjct: 628 MGRTESAYQHFHEMLERGLVPNKYTYTLLID 658



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 213/428 (49%), Gaps = 7/428 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+  +I GL  +  + +AA L   +R+   +   FTY  L+ GL        A  L
Sbjct: 264 PNDVTYNVVINGLARKGELEKAAQLVDIMRLSK-KASAFTYNPLITGLLARDFVEKAGAL 322

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM N     G+V  P  VTY T+IDGL K G  + A+    +M+ K + P+++TY S+
Sbjct: 323 LLEMENE----GIV--PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSL 376

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C A +  +A  LF ++   G+ P V+T+N+++D  C+ G ++ A RL + M +   
Sbjct: 377 INGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDC 436

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY  L++G C+   +   +  F  M S G +   F+Y+  I+       I  A  
Sbjct: 437 LPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQ 496

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM+ +GI  D V +N L  GL +   ++ A+ L+ +M  +G+  D  TY   I   C
Sbjct: 497 LREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHC 556

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G ++EA  +F  +        +  Y   I   C+ G L +A   FR +    + PN V
Sbjct: 557 ERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEV 616

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY++++  LC  G+ + A   F +M E  +VPN  T+ +LI G  +       I L  +M
Sbjct: 617 TYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEM 676

Query: 441 KEINVMPD 448
            +  + PD
Sbjct: 677 HQKGIHPD 684



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 199/402 (49%), Gaps = 6/402 (1%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           A T+  LI GL A   + +A AL  ++   G  P V TY TL++GL +T +   A   F+
Sbjct: 300 AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFD 359

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           EM    G       P+ +TY ++I+G CK G + +A  L   +K   + P V+TY  +I 
Sbjct: 360 EM-RAKGLL-----PDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILID 413

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+C   D   A+RL  EM ++   P+V T+ ++M+  C    +       D M+  G+ P
Sbjct: 414 GYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D F YNT +      G + +A +L   M   G      +Y++LI+G CK   ++ A  L+
Sbjct: 474 DCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLW 533

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M++ G++ D V +  L     E  ++  A  +FD M  +G++    TY  FI   C+ 
Sbjct: 534 MKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRR 593

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G +  A   F  +     E +   YN L+  LC+ GR E A + F  +    LVPN  TY
Sbjct: 594 GNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTY 653

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +++I G C +G    A  L+ +M +  + P+  T + L +GF
Sbjct: 654 TLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 176/369 (47%), Gaps = 41/369 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+ +LI GL        A   F ++R  G  PD+ TY +L+NG C+  +   AL L
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCL 392

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F ++            P  +TY  +IDG C+ G ++ A+ L  +M +++  P+V TYT +
Sbjct: 393 FGDLKRAG------LGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTIL 446

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPN-------------------------------- 168
           + G C  ++    +  F EM+ +G++P+                                
Sbjct: 447 MNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGI 506

Query: 169 ---VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
               VT+NV++D LCK G + +A  L   M+  G+R D  TY  L+   C  GR+  AK 
Sbjct: 507 SSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKN 566

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F  M + G   +V +Y+I I+ YC+   +  A   + +ML +G++P+ V +N L   L 
Sbjct: 567 IFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALC 626

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
            + + E A++ F EM   G+  + +TY   IDG CK G  V A+ L+  +       D  
Sbjct: 627 RMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHC 686

Query: 346 AYNSLIDGL 354
            +N+L  G 
Sbjct: 687 THNALFKGF 695



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 171/340 (50%), Gaps = 3/340 (0%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M    + P V     V+R    A  W++ + ++ +M+  GV+P++ T+N ++D  CK G
Sbjct: 184 EMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAG 243

Query: 184 KMDEASRLLDLMIQH--GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +MD+A  LL  M     G  P+  TYN +++G    G +  A +L V +  +  K + F+
Sbjct: 244 RMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQL-VDIMRLSKKASAFT 302

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G      +E A +L  EM ++GI P VV +NTL  GLF+    E A   FDEM+
Sbjct: 303 YNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMR 362

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  TY + I+G CK G + +A+ LF  L+       +  YN LIDG C+ G LE
Sbjct: 363 AKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLE 422

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +     +P+V TY+I++ G C    +   R  F +M    + P+   ++  I
Sbjct: 423 GARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRI 482

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              + I   +   +L  +M    +  D    ++++D L K
Sbjct: 483 SAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCK 522



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/295 (36%), Positives = 148/295 (50%), Gaps = 5/295 (1%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F EM   GV P V   N ++  L    + D+   +   M+Q GV P  FTYNTLLD FC 
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 217 TGRVNHAKELFVSME--SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPD 273
            GR++ A  L   ME  + GC     +Y+++ING  +  E+E A  L   M LSK  K  
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK--KAS 299

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +N L  GL     VE+A  L  EM+  G+     TY T IDGL K G    A   F 
Sbjct: 300 AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFD 359

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R      D+  YNSLI+G CK+G L+ AL LF  L    L P V+TY+I+I G C  G
Sbjct: 360 EMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLG 419

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            ++ AR L  +M E   +P+V T+ +L+ G   +   + V     +M    + PD
Sbjct: 420 DLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPD 474



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 130/271 (47%), Gaps = 6/271 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+T L+ G C    +      F ++   G EPD F Y T ++          A  L
Sbjct: 438 PDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQL 497

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            EEM       G+    +TVTY  +IDGLCK G +  A  L ++M    ++ + VTYT +
Sbjct: 498 REEMM----LRGI--SSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCL 551

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      EAK +F  M+  G+ P+VVT+ + +   C+ G +  A      M++ GV
Sbjct: 552 IHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGV 611

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TYN L+   C  GR   A + F  M   G     ++Y++LI+G CK      A+ 
Sbjct: 612 EPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIR 671

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           LY EM  KGI PD   HN LF G  E H  +
Sbjct: 672 LYCEMHQKGIHPDHCTHNALFKGFGEGHMYD 702



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 174/365 (47%), Gaps = 9/365 (2%)

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           L+ F+EMA  +G    V E N V     +  L      D  + +   M    ++P++ TY
Sbjct: 179 LSAFQEMAR-HGVAPFVKECNCV-----LRVLRDAARWDDMRAVYSDMLQLGVEPSIFTY 232

Query: 138 TSVIRGFCYAKDWNEAKRLF--IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
            +++  FC A   ++A  L   +E    G  PN VT+NV+++ L + G++++A++L+D+M
Sbjct: 233 NTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM 292

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            +   +  AFTYN L+ G      V  A  L + ME+ G   TV +Y+ LI+G  K    
Sbjct: 293 -RLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNA 351

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E A   + EM +KG+ PD++ +N+L  G  +   +++A  LF +++R G+     TY   
Sbjct: 352 EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNIL 411

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           IDG C+ G +  A  L   +    C  D+  Y  L++G C    L +    F  +    L
Sbjct: 412 IDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGL 471

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+   Y+  I      G +  A  L  +M    +  + +T+++LI G  +         
Sbjct: 472 EPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYV 531

Query: 436 LLHKM 440
           L  KM
Sbjct: 532 LWMKM 536



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 8/215 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +++ F +   ++    + D VT+  LI GLC    + +A  L+ K+   G   D  T
Sbjct: 488 IGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVT 547

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           YT L++  C     I A N+F+ M A+G         P+ VTYT  I   C+ G +  A 
Sbjct: 548 YTCLIHAHCERGRLIEAKNIFDGMVASG-------LSPSVVTYTIFIHTYCRRGNLYLAY 600

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
               +M ++ ++PN VTY  ++   C       A + F EM+++G+ PN  T+ +++D  
Sbjct: 601 GWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGS 660

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           CK G    A RL   M Q G+ PD  T+N L  GF
Sbjct: 661 CKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/455 (30%), Positives = 237/455 (52%), Gaps = 10/455 (2%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           +HG  VL  +LK  F  +   +  L+KGLC      +A +L  ++R     PDV +Y T+
Sbjct: 126 AHG--VLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTV 183

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           + G C       AL L  EM  G+G     C  + VT+  +ID  CK G +D+A  LL +
Sbjct: 184 IRGFCEGKELEKALQLANEM-QGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGLLKE 237

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           MK K ++ +++ YTS+IRGFC   + +  K LF E++++G  P  +T+N ++   CK G+
Sbjct: 238 MKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGR 297

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           + EAS + + M++ GVRP+ +TY  L+DG C  G+   A +L   M     +  V +Y+I
Sbjct: 298 LKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNI 357

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +IN  CK+  +  AL +   M  +  +PD + +N+L  GL     ++ A KL   M ++ 
Sbjct: 358 IINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 305 --VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
                D  ++   I GLCK   + +A++++  L       DI   N L++   KSG +  
Sbjct: 418 SYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNK 477

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+EL++ +    +VPN  TY+ MI G C  G ++ A+ L   M  + + P+V  ++ L+ 
Sbjct: 478 AMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLS 537

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
              +     +   L  +M+  +  PD    +I++D
Sbjct: 538 SLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMID 572



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 223/436 (51%), Gaps = 10/436 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+  LI   C   ++ EA  L  +++  G E D+  YT+L+ G C          LF+E
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDE 272

Query: 84  -MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
            +  G+        P  +TY T+I G CK G + +A E+   M ++ ++PNV TYT +I 
Sbjct: 273 VLERGD-------SPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLID 325

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G C      EA +L   M+ +  +PNVVT+N+I+++LCK+  + +A  +++LM +   RP
Sbjct: 326 GLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRP 385

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           D  TYN+LL G C  G ++ A +L   M  +S      V S++ LI+G CK   +  AL 
Sbjct: 386 DNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALD 445

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +Y  ++ K    D+V  N L     +   V +A +L+ ++  + +  ++ TY T IDG C
Sbjct: 446 IYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFC 505

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G +  A  L   +R+ +    +  YN L+  LCK G L+ A  LF  +      P+V+
Sbjct: 506 KTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVI 565

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +++IMI G    G +  A  L + M    + P++ T+  LI  F+++    + I    KM
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625

Query: 441 KEINVMPDASIVSIVV 456
            +    PDA I   V+
Sbjct: 626 IDSGFEPDAHICDSVL 641



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 234/485 (48%), Gaps = 44/485 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G  +   +L+   +P A+T+ +LI+G C   R+ EA+ +F  +   G  P+V+TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTY 320

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GLC    T  AL L   M   +       EPN VTY  II+ LCK+  V  A E+
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMLQKDE------EPNVVTYNIIINKLCKDSLVADALEI 374

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDEL 179
           +  MK +  +P+ +TY S++ G C   D +EA +L   M+       P+V++FN ++  L
Sbjct: 375 VELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGL 434

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK  ++ +A  + DL+++     D  T N LL+    +G VN A EL+  + +       
Sbjct: 435 CKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNS 494

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +I+G+CK   +  A  L  +M    + P V  +N L   L +   +++A++LF+E
Sbjct: 495 DTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEE 554

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           MQR+    D  ++   IDG  K G                   DI++  SL+ G+  +G 
Sbjct: 555 MQRDDSFPDVISFNIMIDGSLKAG-------------------DIKSAESLLVGMSHAG- 594

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
                          L P++ TYS +I      G +D+A   F  M ++   P+    D 
Sbjct: 595 ---------------LSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDS 639

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS-FTVHEQQ 478
           +++  I   E  K+ E + K+ + +V+ D  +   V+D +  +  +++       V + +
Sbjct: 640 VLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVADDK 699

Query: 479 EEVDE 483
           EE D+
Sbjct: 700 EEGDK 704



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 196/366 (53%), Gaps = 2/366 (0%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N   Y  ++ GLC+     KA  LL +M+  ++ P+VV+Y +VIRGFC  K+  +A +L 
Sbjct: 141 NVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLA 200

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM   G   ++VT+ +++D  CK GKMDEA  LL  M   G+  D   Y +L+ GFC  
Sbjct: 201 NEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDC 260

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G ++  K LF  +   G      +Y+ LI G+CK   ++ A  ++  M+ +G++P+V  +
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTY 320

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             L  GL  + + + A +L + M +     +  TY   I+ LCK+  + +A+E+   ++ 
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKK 380

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL--PCGVLVPNVVTYSIMIGGLCNDGQM 395
            +   D   YNSL+ GLC  G L+ A +L   +        P+V++++ +I GLC   ++
Sbjct: 381 RRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRL 440

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            +A D++  + E     +++T ++L+   ++  + +K +EL  ++    ++P++   + +
Sbjct: 441 HQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTM 500

Query: 456 VDLLAK 461
           +D   K
Sbjct: 501 IDGFCK 506



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 206/418 (49%), Gaps = 25/418 (5%)

Query: 30  IKGLCAES--RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           ++ LC +S  ++  A ++F +    G     F    L+  L R+ +  VA + + +M   
Sbjct: 43  LRSLCEDSNPQLKNAVSVFQQAVDSGGSLS-FAGNNLMATLVRSRNHEVAFSFYRKML-- 99

Query: 88  NGEFGVVCEPNTVTYTTIIDGLC-------KEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
                   E +T      + GL        K GF      L+L+   +    NV  Y  +
Sbjct: 100 --------ETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK---RGFAFNVYNYNIL 148

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G C   ++ +A  L  EM    + P+VV++N ++   C+  ++++A +L + M   G 
Sbjct: 149 LKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGC 208

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
                T+  L+D FC  G+++ A  L   M+  G +  +  Y+ LI G+C   E++   +
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKA 268

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ E+L +G  P  + +NTL  G  ++ +++ A ++F+ M   GV  + +TY   IDGLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLC 328

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G   EA++L + +     E ++  YN +I+ LCK   +  ALE+   +      P+ +
Sbjct: 329 GVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNI 388

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVV--PNVITFDMLIRGFIRINEPSKVIEL 436
           TY+ ++GGLC  G +D+A  L   M +++    P+VI+F+ LI G  + N   + +++
Sbjct: 389 TYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDI 446



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 135/260 (51%)

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           LL+ F    +   A  +   M   G    V++Y+IL+ G C+N E   A+SL  EM    
Sbjct: 113 LLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNS 172

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           + PDVV +NT+  G  E  ++E+A +L +EMQ +G +    T+   ID  CK G + EA+
Sbjct: 173 LMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
            L   ++    E D+  Y SLI G C  G L+    LF  +      P  +TY+ +I G 
Sbjct: 233 GLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C  G++ +A ++F  M E  V PNV T+  LI G   + +  + ++LL+ M + +  P+ 
Sbjct: 293 CKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNV 352

Query: 450 SIVSIVVDLLAKNEISLNSL 469
              +I+++ L K+ +  ++L
Sbjct: 353 VTYNIIINKLCKDSLVADAL 372



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 126/246 (51%), Gaps = 2/246 (0%)

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S S L+  + + ++   A  + + ML +G   +V  +N L  GL    +  +A  L  EM
Sbjct: 109 SLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREM 168

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           ++N +  D  +Y T I G C+   + +A++L + ++   C + +  +  LID  CK+G++
Sbjct: 169 RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKM 228

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A+ L + +    L  +++ Y+ +I G C+ G++D+ + LF ++ E    P  IT++ L
Sbjct: 229 DEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           IRGF ++    +  E+   M E  V P+    + ++D L     +  +L    +  Q++E
Sbjct: 289 IRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE 348

Query: 481 VDESNV 486
             E NV
Sbjct: 349 --EPNV 352


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/407 (32%), Positives = 220/407 (54%), Gaps = 10/407 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M R+     VL R+    F+PD VT+  +I  LC+  ++  A  +  +L    C+P V T
Sbjct: 171 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 230

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+           AL L +EM +         +P+  TY TII G+CKEG VD+A E
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTIIRGMCKEGMVDRAFE 284

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++  ++ K  +P+V++Y  ++R       W E ++L  +M  +   PNVVT+++++  LC
Sbjct: 285 MVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           ++GK++EA  LL LM + G+ PDA++Y+ L+  FC  GR++ A E   +M S GC   + 
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++   CKN + + AL ++ ++   G  P+   +NT+F  L+      RA  +  EM
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSG 358
             NG+  D  TY + I  LC+ G + EA EL   +R   CEF   +  YN ++ G CK+ 
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR--SCEFHPSVVTYNIVLLGFCKAH 522

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           R+E A+ +  S+      PN  TY+++I G+   G   +A +L  D+
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 229/448 (51%), Gaps = 7/448 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +++  + PD +  T LIKG      I +A  +   L  FG +PDVF Y  L+NG C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           + +    A  + + M + +        P+TVTY  +I  LC  G +D A ++L Q+   N
Sbjct: 170 KMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +P V+TYT +I         +EA +L  EM+ +G++P++ T+N I+  +CK G +D A 
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            ++  +   G  PD  +YN LL      G+    ++L   M S  C   V +YSILI   
Sbjct: 284 EMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C++ +IE A++L   M  KG+ PD   ++ L        +++ A +  + M  +G   D 
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y T +  LCKNG   +A+E+F  L  + C  +  +YN++   L  SG    AL +   
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P+ +TY+ MI  LC +G +D+A +L +DM      P+V+T+++++ GF + + 
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVD 457
               I +L  M      P+ +  +++++
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIE 551



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 194/393 (49%), Gaps = 7/393 (1%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR+ + I +L+L E M            P+ +  T +I G      + KA  ++ ++ +K
Sbjct: 100 CRSGNYIESLHLLETMVRKG------YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEK 152

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             +P+V  Y ++I GFC     ++A R+   M  +   P+ VT+N+++  LC  GK+D A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++L+ ++    +P   TY  L++   L G V+ A +L   M S G K  +F+Y+ +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK   ++ A  +   +  KG +PDV+ +N L   L    + E   KL  +M       +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY   I  LC++G I EA+ L   ++      D  +Y+ LI   C+ GRL++A+E   
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           ++     +P++V Y+ ++  LC +G+ D+A ++F  + E    PN  +++ +        
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  + + ++ +M    + PD    + ++  L +
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 1/318 (0%)

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C + ++ E+  L   M+ +G  P+V+    ++        + +A R+++++ + G +PD 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
           F YN L++GFC   R++ A  +   M S        +Y+I+I   C   +++ AL + ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           +LS   +P V+ +  L         V+ A KL DEM   G+  D +TY T I G+CK G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A E+   L +   E D+ +YN L+  L   G+ E   +L   +      PNVVTYSI
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  LC DG++++A +L   M+E  + P+  ++D LI  F R       IE L  M    
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 445 VMPDASIVSIVVDLLAKN 462
            +PD    + V+  L KN
Sbjct: 399 CLPDIVNYNTVLATLCKN 416


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 252/564 (44%), Gaps = 110/564 (19%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F     ++    +PDA T+ +L+ GLC   R+ EA AL  ++   G +P+V  Y
Sbjct: 294 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVY 353

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLV+G  +      A ++  EM +     GV  +PN + Y  +I GLCK G + +A +L
Sbjct: 354 ATLVDGFMKEGKAAEAFDILNEMISA----GV--QPNKIMYDNLIRGLCKIGQLGRASKL 407

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M     +P+  TY  +++G     D + A  L  EM + G+ PN  T+ ++++ LC+
Sbjct: 408 LNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQ 467

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTY---------------------------------- 207
           NG+  EA  LL+ MI  G++P+AF Y                                  
Sbjct: 468 NGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFC 527

Query: 208 -NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
            N+L+ G    GR+  A+E +  ++  G     F+YS LI+GYCK + +E A  L  +ML
Sbjct: 528 YNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQML 587

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVER---------------------------------- 292
           + G+KP+   +  L  G F+ +  E+                                  
Sbjct: 588 NSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENME 647

Query: 293 -AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            AF +  E+++NG+  D   Y + I GLCK   + +AV L   +     E  I  YN+LI
Sbjct: 648 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALI 707

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG C+SG +  A  +F S+    L+PN VTY+ +I G C +G +  A DL+ DM +  + 
Sbjct: 708 DGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIA 767

Query: 412 PN----------------------------------VITFDMLIRGFIRINEPSKVIELL 437
           P+                                  V  F  L+RGF +     +  +LL
Sbjct: 768 PDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLL 827

Query: 438 HKMKEINVMPDASIVSIVVDLLAK 461
           H M +  ++P+A  V  V+    K
Sbjct: 828 HVMMDREIVPNAQTVENVITEFGK 851



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 217/436 (49%), Gaps = 10/436 (2%)

Query: 32  GLCAESRIMEAAALFTKLRVF----GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           GL  +    +A  L  KL+ F    G  PDV+TY+T +   C+      A  +FEEM   
Sbjct: 215 GLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRR 274

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
           +      C  N VTY  +I GLC+ G V++A     +M D  + P+  TY +++ G C  
Sbjct: 275 D------CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKG 328

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
               EAK L  EM   G++PNVV +  ++D   K GK  EA  +L+ MI  GV+P+   Y
Sbjct: 329 GRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMY 388

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           + L+ G C  G++  A +L   M  +G +   F+Y  L+ G+ ++ + +GA  L +EM +
Sbjct: 389 DNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRN 448

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            GI P+   +  +  GL +  + + A  L +EM   G+  + + Y   I G  K G+I  
Sbjct: 449 SGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISL 508

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A E    +       D+  YNSLI GL   GR+E A E +  +    LVP+  TYS +I 
Sbjct: 509 ACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIH 568

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           G C    ++KA  L   M  + + PN  T+  L+ G+ + N+  KV  +L  M      P
Sbjct: 569 GYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKP 628

Query: 448 DASIVSIVVDLLAKNE 463
           D  I  IV+  L+++E
Sbjct: 629 DNHIYGIVIRNLSRSE 644



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 224/441 (50%), Gaps = 6/441 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+++ ++  C       A  +F ++R   C  +  TY  +++GLCR+     A   
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 302

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            EEM     ++G+   P+  TY  +++GLCK G + +AK LL +M    +KPNVV Y ++
Sbjct: 303 KEEMV----DYGL--SPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GF       EA  +  EM+  GVQPN + ++ ++  LCK G++  AS+LL+ MI+ G 
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           RPD FTY+ L+ G       + A EL   M + G     ++Y I+ING C+N E + A +
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM+S+G+KP+  ++  L +G  +   +  A +  + M +  V  D + Y + I GL 
Sbjct: 477 LLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLS 536

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G I EA E +  ++      D   Y+ LI G CK+  LE A +L + +    L PN  
Sbjct: 537 TVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNAD 596

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ G       +K   +   M  +   P+   + ++IR   R         +L ++
Sbjct: 597 TYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 656

Query: 441 KEINVMPDASIVSIVVDLLAK 461
           ++  ++PD  I S ++  L K
Sbjct: 657 EKNGLVPDLHIYSSLISGLCK 677



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 186/369 (50%), Gaps = 7/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S     L  + K+   PD   + SLIKGL    RI EA   + +++  G  PD FTY
Sbjct: 504 GHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTY 563

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++G C+T +   A  L ++M N         +PN  TYT +++G  K    +K   +
Sbjct: 564 SGLIHGYCKTRNLEKADQLLQQMLNSG------LKPNADTYTDLLEGYFKSNDHEKVSSI 617

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M     KP+   Y  VIR    +++   A  +  E+   G+ P++  ++ ++  LCK
Sbjct: 618 LQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCK 677

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              M++A  LLD M + G+ P    YN L+DGFC +G ++ A+ +F S+ + G      +
Sbjct: 678 MADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVT 737

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G CKN +I  A  LY +ML +GI PD  ++N L  G  +   +E+A  L +EM 
Sbjct: 738 YTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF 797

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G  A    + T + G CK G + E  +L H +   +   + +   ++I    K+G+L 
Sbjct: 798 NRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLC 856

Query: 362 IALELFRSL 370
            A  +F  L
Sbjct: 857 EAHRVFAEL 865



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 182/442 (41%), Gaps = 65/442 (14%)

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           +CR SH++    L +           +  P+   +  +   LC      +A  LL QM  
Sbjct: 87  ICRRSHSLHPKLLLDFFYWSRPR---IAPPSADAFARLAASLCAASHFPQANGLLHQMIL 143

Query: 128 KNIKPNVVTYTSVIRGF------------------------CYAKDWN--EAKRLFIEMM 161
            +  P +V   S+ R                           Y K+ +   A ++ + M 
Sbjct: 144 AHPHPPLV-LASIQRAIQDSDARSPSPSPSHSTAVLDVLVDTYKKNGSVRTAAQVVLMMG 202

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           D G+ P     N ++ +L +   M+   +L   M   G+ PD +TY+T L+  C     +
Sbjct: 203 DLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFD 262

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            AK++F  M    C     +Y+++I+G C++  +E A     EM+  G+ PD   +  L 
Sbjct: 263 AAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALM 322

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL +  +++ A  L DEM  +G+  +   Y T +DG  K G   EA ++ + +     +
Sbjct: 323 NGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQ 382

Query: 342 FDIRAYNSLIDGLCKSGRL-----------------------------------EIALEL 366
            +   Y++LI GLCK G+L                                   + A EL
Sbjct: 383 PNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFEL 442

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
              +    ++PN  TY IMI GLC +G+  +A +L  +M    + PN   +  LI G  +
Sbjct: 443 LNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSK 502

Query: 427 INEPSKVIELLHKMKEINVMPD 448
               S   E L  M + NV+PD
Sbjct: 503 EGHISLACESLENMTKANVLPD 524



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 161/339 (47%), Gaps = 7/339 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+        ++ K    PD  T++ LI G C    + +A  L  ++   G +P+  T
Sbjct: 538 VGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADT 597

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ G  +++      ++ + M  G+G+     +P+   Y  +I  L +   ++ A  
Sbjct: 598 YTDLLEGYFKSNDHEKVSSILQSML-GSGD-----KPDNHIYGIVIRNLSRSENMEVAFM 651

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L +++   + P++  Y+S+I G C   D  +A  L  EM  +G++P +V +N ++D  C
Sbjct: 652 VLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 711

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           ++G +  A  + D ++  G+ P+  TY  L+DG C  G +  A +L+  M   G     F
Sbjct: 712 RSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAF 771

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y++L  G     ++E AL L  EM ++G    V + +TL  G  +  +++   KL   M
Sbjct: 772 VYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVM 830

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
               +  +  T    I    K G + EA  +F  L+  K
Sbjct: 831 MDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKK 869



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 8/183 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S    V   IL     P+ VT+T+LI G C    I +A  L+  +   G  PD F Y
Sbjct: 714 GDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVY 773

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L  G    +    AL L EEM N           +   ++T++ G CK G + + ++L
Sbjct: 774 NVLATGCSDAADLEQALFLTEEMFNRG-------YAHVSLFSTLVRGFCKRGRLQETEKL 826

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELC 180
           L  M D+ I PN  T  +VI  F  A    EA R+F E+   +  Q +   F+++  ++ 
Sbjct: 827 LHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTDMI 886

Query: 181 KNG 183
             G
Sbjct: 887 NKG 889


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/404 (34%), Positives = 220/404 (54%), Gaps = 14/404 (3%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+  L  E++I +   ++ ++       ++ T+   +NGLCR      A +  E+M    
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMK--- 227

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVD---KAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
             +G+   PN VTY T++DG CK G      KA+  + +M    I PN VT+ ++I GFC
Sbjct: 228 -AWGI--SPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFC 284

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
             ++   AK+ F EM  QG++PN+VT+N +++ LC NGK++EA  L D M+  G++P+  
Sbjct: 285 KDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIV 344

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN L++GFC    +  A ++F  +        V +++ +I+ YCK   +E   SL S M
Sbjct: 345 TYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSM 404

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L +GI P+V  +N L  GL     ++ A +L +EM+  G+  D  TY   IDGLCKN   
Sbjct: 405 LDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKS 464

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A +L + +  L  + +   YN+L+DG C  G+L+ AL +   +      PNVVTY+++
Sbjct: 465 RNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVL 524

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFD-----MLIRGF 424
           I G C   +++ A  L  +M E  + PN  T+D     ML +GF
Sbjct: 525 IKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGF 568



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 222/417 (53%), Gaps = 9/417 (2%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A   FT+ + +G +  + +   L++ L + +       +++EM             N  T
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR------IHTNLNT 202

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC---YAKDWNEAKRLFI 158
           +   I+GLC+ G ++KA++ +  MK   I PNVVTY +++ G+C    A    +A+    
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           EM+   + PN VTFN ++D  CK+  +  A +  + M + G++P+  TYN+L++G C  G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           ++  A +L+  M  +G K  + +Y+ LING+CK K ++ A  ++ ++  + + P+V+  N
Sbjct: 323 KLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFN 382

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           T+     +   +E  F L   M   G+  +  TY   I GLC+   +  A EL + +   
Sbjct: 383 TMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             + D+  YN LIDGLCK+ +   A +L   +    L PN VTY+ ++ G C +G++  A
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            ++   ME+    PNV+T+++LI+G+ +IN+      LL++M E  + P+ +   IV
Sbjct: 503 LNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 198/365 (54%), Gaps = 11/365 (3%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR--TSHTIVALNLF- 81
           TF   I GLC   ++ +A      ++ +G  P+V TY TLV+G C+  ++  +     F 
Sbjct: 202 TFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFM 261

Query: 82  -EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E +AN       +C PN VT+ T+IDG CK+  V  AK+   +M+ + +KPN+VTY S+
Sbjct: 262 KEMLANK------IC-PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSL 314

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C      EA  L+ +M+  G++PN+VT+N +++  CK   M EA+++ D + +  +
Sbjct: 315 INGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQEL 374

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  T+NT++D +C  G +     L  SM   G    V +Y+ LI G C+ ++++ A  
Sbjct: 375 VPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKE 434

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L +EM +KG+K DVV +N L  GL +  +   A KL +EM   G+  +  TY T +DG C
Sbjct: 435 LLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYC 494

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G +  A+ +   +   + + ++  YN LI G CK  +LE A  L   +    L PN  
Sbjct: 495 MEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRT 554

Query: 381 TYSIM 385
           TY I+
Sbjct: 555 TYDIV 559



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 170/314 (54%), Gaps = 29/314 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++      +  +L +   P+ VTF +LI G C +  +  A   F +++  G +P++ TY
Sbjct: 252 GKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTY 311

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVVCE---------- 96
            +L+NGLC       A++L+++M                NG  +  ++ E          
Sbjct: 312 NSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK 371

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN +T+ T+ID  CKEG +++   L   M D+ I PNV TY  +I G C  +D   
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQA 431

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           AK L  EM ++G++ +VVT+N+++D LCKN K   A +LL+ M   G++P+  TYNTL+D
Sbjct: 432 AKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMD 491

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C+ G++  A  +   ME    +  V +Y++LI GYCK  ++E A  L +EML KG+ P
Sbjct: 492 GYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNP 551

Query: 273 DVVIHNTLFVGLFE 286
           +   ++ + + + E
Sbjct: 552 NRTTYDIVRLEMLE 565



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 153/281 (54%), Gaps = 25/281 (8%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K    P+ VT+ SLI GLC   ++ EA  L+ K+   G +P++ TY  L+NG C+     
Sbjct: 301 KQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMK 360

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  +F++++           PN +T+ T+ID  CKEG +++   L   M D+ I PNV 
Sbjct: 361 EATKVFDDVSKQE------LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVS 414

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY  +I G C  +D   AK L  EM ++G++ +VVT+N+++D LCKN K   A +LL+ M
Sbjct: 415 TYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEM 474

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G++P+  TYNTL+DG+C+ G++  A  +   ME    +  V +Y++LI GYCK  ++
Sbjct: 475 FNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKL 534

Query: 256 EGALSLYSEMLSKG-------------------IKPDVVIH 277
           E A  L +EML KG                     PD+  H
Sbjct: 535 EAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDIEGH 575



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 172/319 (53%), Gaps = 3/319 (0%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A   F    D G + ++ + N ++  L K  K+ +   +   MI+  +  +  T+N  ++
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK---EIEGALSLYSEMLSKG 269
           G C  G++N A++    M++ G    V +Y+ L++GYCK     ++  A +   EML+  
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           I P+ V  NTL  G  +   V  A K F+EMQ+ G+  +  TY + I+GLC NG + EA+
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           +L+  +  L  + +I  YN+LI+G CK   ++ A ++F  +    LVPNV+T++ MI   
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C +G M++   L   M +  ++PNV T++ LI G  R  +     ELL++M+   +  D 
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448

Query: 450 SIVSIVVDLLAKNEISLNS 468
              +I++D L KN+ S N+
Sbjct: 449 VTYNILIDGLCKNDKSRNA 467



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 6/182 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +   +L     P+  T+  LI GLC +  +  A  L  ++   G + DV TY
Sbjct: 392 GMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTY 451

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++GLC+   +  A  L  EM      F +  +PN VTY T++DG C EG +  A  +
Sbjct: 452 NILIDGLCKNDKSRNAEKLLNEM------FNLGLKPNHVTYNTLMDGYCMEGKLKAALNV 505

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ +  +PNVVTY  +I+G+C       A  L  EM+++G+ PN  T++++  E+ +
Sbjct: 506 RTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLE 565

Query: 182 NG 183
            G
Sbjct: 566 KG 567



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 126/267 (47%), Gaps = 21/267 (7%)

Query: 236 KHTVFS--YSILING----------------YCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           KHTV S  +S+L++G                Y KN E+  A   ++     G K  +   
Sbjct: 109 KHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSC 168

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N L   L + +++     ++ EM +  +  +  T+  FI+GLC+ G + +A +    ++ 
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228

Query: 338 LKCEFDIRAYNSLIDGLCK---SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                ++  YN+L+DG CK   +G++  A    + +    + PN VT++ +I G C D  
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +  A+  F +M++  + PN++T++ LI G     +  + I+L  KM  + + P+    + 
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNA 348

Query: 455 VVDLLAKNEISLNSLPSFTVHEQQEEV 481
           +++   K ++   +   F    +QE V
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELV 375


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 249/485 (51%), Gaps = 28/485 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V+    +   +++    PD V F+ LI G      + +A  L+T++++ G +P+VF 
Sbjct: 338 LGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFI 397

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGN--------------GEFGVVCE---------- 96
             +L+ G    +    A  LF+E                   GE G V E          
Sbjct: 398 VNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVS 457

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P+ V+Y  +I G CK+G +DKA  +L  + ++ +KPN VTYT +I GF    D   
Sbjct: 458 KGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSER 517

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  +F +MM   + P   TFN +++ L K G++ E    L+  I+ G    + TYN+++D
Sbjct: 518 AFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIID 577

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           GF   G V+ A   +  M   G    V +Y+ LI+G CK+ +I  AL ++S+M  KG+K 
Sbjct: 578 GFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKL 637

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           DVV ++ L  G  ++H +E A K F E+   G+  +T  Y + I G      +  A+ L 
Sbjct: 638 DVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLH 697

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +   K   D++ Y S+I GL K G+L +AL+L+  +    +VP++V Y+++I GL N+
Sbjct: 698 QEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNN 757

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           GQ++ A  +  +M+ N + P+V+ +++LI G  R     +   L  +M +  ++PD +  
Sbjct: 758 GQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTY 817

Query: 453 SIVVD 457
            I+V+
Sbjct: 818 DILVN 822



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 215/408 (52%), Gaps = 6/408 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + VT+  L+K L    ++ EA  L+ K+   G  P + +Y  L+ G C+      A ++ 
Sbjct: 428 NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSML 487

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + +     E G+  +PN VTYT +IDG  K+G  ++A  +  QM   NI P   T+ +VI
Sbjct: 488 KSIL----ERGL--KPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVI 541

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G       +E +      + QG     +T+N I+D   K G +D A      M + G+ 
Sbjct: 542 NGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGIS 601

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY +L+DG C + ++  A E+   M+  G K  V +YS LI+G+CK  ++E A   
Sbjct: 602 PDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKF 661

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           ++E+L  G+ P+ V++N++  G   ++ +E A  L  EM +N V  D   Y + I GL K
Sbjct: 662 FTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLK 721

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G +  A++L+  +       DI  Y  LI+GL  +G+LE A ++ + +    + P+V+ 
Sbjct: 722 EGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLV 781

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           Y+I+I G   +G + +A  L  +M +  +VP+  T+D+L+ G ++++ 
Sbjct: 782 YNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSH 829



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 238/479 (49%), Gaps = 42/479 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + P   T+T++I     +   +EA  L  ++   G   +V    +L+ G C      +AL
Sbjct: 286 WVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLAL 345

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF+E+  G    GVV  P+ V ++ +I+G  K G ++KA EL  +MK   I+PNV    
Sbjct: 346 QLFDEVVEG----GVV--PDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVN 399

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S++ GF        A  LF E ++ G+  NVVT+N+++  L + GK++EA  L + M+  
Sbjct: 400 SLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSK 458

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P   +YN L+ G C  G ++ A  +  S+   G K    +Y++LI+G+ K  + E A
Sbjct: 459 GITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERA 518

Query: 259 LSLYSEMLSKGIKPD-----------------------------------VVIHNTLFVG 283
             ++ +M++  I P                                     + +N++  G
Sbjct: 519 FVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDG 578

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            F+   V+ A   + EM  +G++ D  TY + IDGLCK+  I  A+E+   ++    + D
Sbjct: 579 FFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLD 638

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           + AY++LIDG CK   +E A + F  L    L PN V Y+ MI G  +   M+ A +L  
Sbjct: 639 VVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQ 698

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +M +N V  ++  +  +I G ++  + S  ++L  +M   +++PD  + +++++ L+ N
Sbjct: 699 EMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNN 757



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 199/420 (47%), Gaps = 7/420 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F  D+  F  L+K     ++I +A   F  +      P V     L+  + R +    A 
Sbjct: 146 FESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDAR 205

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L++EM    G +G     +  T   ++    KEG  ++ ++   + K + ++ +   Y+
Sbjct: 206 QLYDEMVE-RGIYG-----DCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYS 259

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +++  C   D N A  L  EM + G  P+  T+  ++    K G   EA RL D M+  
Sbjct: 260 ILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSV 319

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+  +     +L+ G+C+ G VN A +LF  +   G    V  +S+LING  K  ++E A
Sbjct: 320 GLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKA 379

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             LY+ M   GI+P+V I N+L  G  E + +E A+ LFDE   +G+  +  TY   +  
Sbjct: 380 YELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKW 438

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L + G + EA  L+  +        + +YN+LI G CK G ++ A  + +S+    L PN
Sbjct: 439 LGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPN 498

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VTY+++I G    G  ++A  +F  M    + P   TF+ +I G  +    S+  + L+
Sbjct: 499 AVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLN 558



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 5/281 (1%)

Query: 149 DWNEAKRLFIEMMDQ-----GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           D   + ++F+E + +     G + +   FN ++    +  K+ +A      M++H + P 
Sbjct: 125 DATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPW 184

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
               N LL        V  A++L+  M   G     ++  +++    K  + E     + 
Sbjct: 185 VPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFK 244

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           E   +G++ D   ++ L   +     +  A +L  EM+  G      TY   I    K G
Sbjct: 245 EAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQG 304

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
             VEA+ L   +  +    ++    SL+ G C  G + +AL+LF  +  G +VP+VV +S
Sbjct: 305 NFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFS 364

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           ++I G    G M+KA +L+  M+   + PNV   + L+ GF
Sbjct: 365 VLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGF 405



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 37/254 (14%)

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           VF+Y  L+  + +  +I  A+  +  ML   + P V I N L   +   + V  A +L+D
Sbjct: 152 VFNY--LLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYD 209

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM   G+  D +T    +    K G   E  + F   +    E D  AY+ L+  +C+  
Sbjct: 210 EMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRL 269

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMI-------------------------------- 386
            L +A EL + +     VP+  TY+ +I                                
Sbjct: 270 DLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTR 329

Query: 387 ---GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
               G C  G ++ A  LF ++ E  VVP+V+ F +LI G  ++ +  K  EL  +MK +
Sbjct: 330 SLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLM 389

Query: 444 NVMPDASIVSIVVD 457
            + P+  IV+ +++
Sbjct: 390 GIQPNVFIVNSLLE 403



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++ +   +L  +  +  TP  + +  LI G   E  + EA  L  ++   G  PD  TY
Sbjct: 758 GQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTY 817

Query: 62  TTLVNGLCRTSHTI 75
             LVNG  + SHT+
Sbjct: 818 DILVNGKLKVSHTL 831


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 242/465 (52%), Gaps = 7/465 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V  R++     P   T+++L+  L  +        L  ++   G  P+V+T+
Sbjct: 206 GFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTF 265

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T  +  L R      A  +F  M +        C P+ VTYT +ID LC  G ++ AKEL
Sbjct: 266 TICIRVLGRAGKIDEAYEIFRRMDDEG------CGPDLVTYTVLIDALCNAGQLENAKEL 319

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            ++MK    KP+ V Y +++  F    D +  K  + +M   G  P+VVTF +++D LCK
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
               DEA    D+M + G+ P+  TYNTL+ G    GR+  A +L  +MES+G + T ++
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y   I+ + K+ E   A+  + +M +KGI P++V  N     L E+ ++  A  +F+ ++
Sbjct: 440 YITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG+A D+ TY   +    K G + EAV L   +    CE D+   NSLID L K+GR++
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++F  +    L P VVTY+ ++ GL  +G++ KA +LF  M      PN I+F+ L+
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLL 619

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEIS 465
             F + +E    +++  KM  ++  PD  +  +++  L+ +N+++
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVN 664



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 234/442 (52%), Gaps = 9/442 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  TFT  I+ L    +I EA  +F ++   GC PD+ TYT L++ LC       A  L
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           F +M ANG+       +P+ V Y T++D     G +D  KE   QM+     P+VVT+T 
Sbjct: 320 FVKMKANGH-------KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++   C A+D++EA   F  M  QG+ PN+ T+N ++  L + G++++A +LLD M   G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V+P A+TY T +D F  +G    A E F  M++ G    + + +  +    +   +  A 
Sbjct: 433 VQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           ++++ +   G+ PD V +N +     ++ QV+ A  L  EM RNG   D     + ID L
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K G + EA ++F  ++ +K    +  YN+L+ GL K GR++ A+ELF S+      PN 
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNT 612

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           ++++ ++   C + +++ A  +F  M      P+V+T++ +I G I+ N+ +      H+
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           +K+ ++ PD   +  ++  L K
Sbjct: 673 LKK-SMHPDHVTICTLLPGLVK 693



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 226/435 (51%), Gaps = 7/435 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   + +  R+      PD VT+T LI  LC   ++  A  LF K++  G +PD   Y
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++      +    L+ F+E  +     G +  P+ VT+T ++D LCK    D+A   
Sbjct: 336 ITLLDKF----NDFGDLDTFKEFWSQMEADGYM--PDVVTFTILVDVLCKARDFDEAFAT 389

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M+ + I PN+ TY ++I G   A    +A +L   M   GVQP   T+   +D   K
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGK 449

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+  +A    + M   G+ P+    N  L      GR+  AK +F  +   G      +
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++++  Y K  +++ A++L SEM+  G +PDV++ N+L   L++  +V+ A+++FD M+
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              ++    TY T + GL K G + +A+ELF ++   KC  +  ++N+L+D  CK+  +E
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVE 629

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL++F  +      P+V+TY+ +I GL  + +++ A   F  +++ ++ P+ +T   L+
Sbjct: 630 LALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLL 688

Query: 422 RGFIRINEPSKVIEL 436
            G ++  +    I +
Sbjct: 689 PGLVKCGQIGDAISI 703



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 229/496 (46%), Gaps = 44/496 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+     +   + ++   PD+VT+  ++K      ++ EA  L +++   GCEPDV  
Sbjct: 485 MGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIV 544

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             +L++ L +      A  +F+ M +      +   P  VTY T++ GL KEG V KA E
Sbjct: 545 VNSLIDSLYKAGRVDEAWQMFDRMKD------MKLSPTVVTYNTLLSGLGKEGRVQKAIE 598

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M  K   PN +++ +++  FC   +   A ++F +M     +P+V+T+N ++  L 
Sbjct: 599 LFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS----------- 229
           K  K++ A       ++  + PD  T  TLL G    G++  A  +              
Sbjct: 659 KENKVNHAFWFFH-QLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717

Query: 230 -----------MESMGCKHTVFSYSILING--------------YCKNKEIEGALSLYSE 264
                      +E+   K  +F+  +++NG               CK+K    A  ++ +
Sbjct: 718 SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDK 777

Query: 265 MLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
              K GI P +  +N L   L E+H  E+A+ LF +M+  G A D +T+   +    K+G
Sbjct: 778 FTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSG 837

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            I E  EL+  +   +C+ D   YN +I  L KS  L+ AL+ F  L      P   TY 
Sbjct: 838 KITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYG 897

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I GL   G++++A  LF +M +    PN   F++LI G+ +I +     +L  +M   
Sbjct: 898 PLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE 957

Query: 444 NVMPDASIVSIVVDLL 459
            + PD    +I+VD L
Sbjct: 958 GIRPDLKSYTILVDCL 973



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           +++ L    ++ + AA+F  ++      D+ TY T+   L         L     + N  
Sbjct: 128 MLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRG----GLRQMTTVLNKM 183

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
            + G V   N  +Y  +I  L + GF  +A E+  +M  + +KP++ TY++++      +
Sbjct: 184 RKAGFVL--NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
           D      L  EM D G++PNV TF + +  L + GK+DEA  +   M   G  PD  TY 
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+D  C  G++ +AKELFV M++ G K     Y  L++ +    +++     +S+M + 
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEAD 361

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  PDVV    L   L +    + AF  FD M++ G+  +  TY T I GL + G I +A
Sbjct: 362 GYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           ++L  T+  +  +     Y + ID   KSG    A+E F  +    +VPN+V  +  +  
Sbjct: 422 LKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYS 481

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           L   G++ +A+ +F  + EN + P+ +T++M+++ + ++ +  + + LL +M      PD
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 449 ASIVSIVVDLLAK 461
             +V+ ++D L K
Sbjct: 542 VIVVNSLIDSLYK 554



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 230/484 (47%), Gaps = 44/484 (9%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV   + +  R+     +P  VT+ +L+ GL  E R+ +A  LF  +    C P+  ++
Sbjct: 556  GRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISF 615

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             TL++  C+     +AL +F +M   +      C+P+ +TY T+I GL KE  V+ A   
Sbjct: 616  NTLLDCFCKNDEVELALKMFSKMTVMD------CKPDVLTYNTVIYGLIKENKVNHAFWF 669

Query: 122  LLQMKDKNIKPNVVTY----------------TSVIRGFCYAKDWNEAKRLFIEMMDQG- 164
              Q+K K++ P+ VT                  S+ R F Y   +   +  + ++M    
Sbjct: 670  FHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL 728

Query: 165  VQPNVVTFNVIMDELCKNGKMDEASRLLDL---MIQH-----------------GVRPDA 204
            V+  +    +  +EL  NG   E S L+ L   + +H                 G+ P  
Sbjct: 729  VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788

Query: 205  FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             +YN L+           A +LF  M+++GC    F++++L+  + K+ +I     LY E
Sbjct: 789  ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKE 848

Query: 265  MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
            M+S+  KPD + +N +   L + + +++A   F ++  +       TY   IDGL K G 
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 325  IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
            + EA+ LF  +    C+ +   +N LI+G  K G  E A +LF+ +    + P++ +Y+I
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 385  MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
            ++  LC  G++D+A   F +++   + P+ I ++ +I G  +     + + L ++M+   
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 445  VMPD 448
            ++PD
Sbjct: 1029 IVPD 1032



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 166/331 (50%), Gaps = 6/331 (1%)

Query: 20   TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            +P   ++  LI  L       +A  LF  ++  GC PD FT+  L+    ++        
Sbjct: 785  SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844

Query: 80   LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            L++EM +        C+P+ +TY  +I  L K   +DKA +    +   + +P   TY  
Sbjct: 845  LYKEMISRR------CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898

Query: 140  VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            +I G        EA RLF EM D G +PN   FN++++   K G  + A +L   M+  G
Sbjct: 899  LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958

Query: 200  VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +RPD  +Y  L+D  CL GRV+ A   F  ++S G      +Y+ +ING  K++ +E AL
Sbjct: 959  IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018

Query: 260  SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +LY+EM ++GI PD+  +N+L + L     VE+A ++++E+Q  G+  D +TY   I G 
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078

Query: 320  CKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
              +     A  ++  + +  C  +I  Y  L
Sbjct: 1079 SLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 222/504 (44%), Gaps = 65/504 (12%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV     +   ++    +P+ ++F +L+   C    +  A  +F+K+ V  C+PDV TY
Sbjct: 591  GRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTY 650

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGN-----------------GEFG------------ 92
             T++ GL + +    A   F ++                     G+ G            
Sbjct: 651  NTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQ 710

Query: 93   VVCEPNTVTYTTIIDGLCKEGFVDKA----KELLL------------------------- 123
            V    N   +  ++ G   E  +DKA    +EL+L                         
Sbjct: 711  VRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELY 770

Query: 124  --QMKDK-----NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
              Q+ DK      I P + +Y  +I          +A  LF +M + G  P+  TFN+++
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 177  DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
                K+GK+ E   L   MI    +PDA TYN ++     +  ++ A + F  + S   +
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 237  HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             T  +Y  LI+G  K   +E A+ L+ EM   G KP+  I N L  G  +I   E A +L
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 297  FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            F  M   G+  D  +Y   +D LC  G + EA+  F+ L+    + D  AYN +I+GL K
Sbjct: 951  FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010

Query: 357  SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            S R+E AL L+  +    +VP++ TY+ ++  L   G +++A+ ++ +++   + P+V T
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070

Query: 417  FDMLIRGFIRINEPSKVIELLHKM 440
            ++ LIRG+     P     +   M
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNM 1094



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 184/356 (51%), Gaps = 7/356 (1%)

Query: 29   LIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
            L++ LC   R + A  +F K  +  G  P + +Y  L+  L    +T  A +LF++M N 
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN- 816

Query: 88   NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                 V C P+  T+  ++    K G + +  EL  +M  +  KP+ +TY  VI     +
Sbjct: 817  -----VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKS 871

Query: 148  KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
             + ++A   F +++    +P   T+  ++D L K G+++EA RL + M  +G +P+   +
Sbjct: 872  NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931

Query: 208  NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
            N L++G+   G    A +LF  M + G +  + SY+IL++  C    ++ AL  ++E+ S
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 268  KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
             G+ PD + +N +  GL +  ++E A  L++EM+  G+  D +TY + +  L   G + +
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 328  AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            A  ++  L++   E D+  YN+LI G   S   E A  +++++      PN+ TY+
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 203/455 (44%), Gaps = 44/455 (9%)

Query: 3    RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRI----------------------- 39
            +V+H F    ++ KS   PD VT  +L+ GL    +I                       
Sbjct: 662  KVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFW 720

Query: 40   ------------MEAAALFTKLRVFG--CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
                        M+ A +F +  V    C  D F    LV  LC+    + A  +F++  
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFL-IPLVRVLCKHKRELYAYQIFDKFT 779

Query: 86   NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
               G       P   +Y  +I  L +  + +KA +L   MK+    P+  T+  ++    
Sbjct: 780  KKLG-----ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834

Query: 146  YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
             +    E   L+ EM+ +  +P+ +T+N+++  L K+  +D+A      ++    RP   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 206  TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            TY  L+DG    GR+  A  LF  M   GCK     ++ILINGY K  + E A  L+  M
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 266  LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            +++GI+PD+  +  L   L    +V+ A   F+E++  G+  D   Y   I+GL K+  +
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 326  VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             EA+ L++ +R      D+  YNSL+  L  +G +E A  ++  L    L P+V TY+ +
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074

Query: 386  IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            I G       + A  ++ +M  +   PN+ T+  L
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 122/234 (52%), Gaps = 6/234 (2%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            ++ S F P   T+  LI GL    R+ EA  LF ++  +GC+P+   +  L+NG  +   
Sbjct: 884  LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGD 943

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
            T  A  LF+ M N          P+  +YT ++D LC  G VD+A     ++K   + P+
Sbjct: 944  TETACQLFKRMVNEG------IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997

Query: 134  VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             + Y  +I G   ++   EA  L+ EM ++G+ P++ T+N +M  L   G +++A R+ +
Sbjct: 998  FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057

Query: 194  LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
             +   G+ PD FTYN L+ G+ L+    HA  ++ +M   GC   + +Y+ L N
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 149/313 (47%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M  + ++ ++ T+  I   L   G + + + +L+ M + G   +A++YN L+     +G 
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
              A E++  M S G K ++ +YS L+    K ++ E  + L  EM   G++P+V     
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
               L    +++ A+++F  M   G   D  TY   ID LC  G +  A ELF  ++   
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + D   Y +L+D     G L+   E +  +     +P+VVT++I++  LC     D+A 
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             F  M +  ++PN+ T++ LI G +R       ++LL  M+ + V P A      +D  
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYF 447

Query: 460 AKNEISLNSLPSF 472
            K+  +  ++ +F
Sbjct: 448 GKSGETGKAVETF 460



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 143/311 (45%), Gaps = 41/311 (13%)

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T N +++ L  + K+++ + + + M +  +R D  TY T+     + G +     +   M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G     +SY+ LI+   ++     AL +Y  M+S+G+KP +  ++ L V L +    
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E    L  EM+  G+  + +T+      +C              +R+L            
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFT-----IC--------------IRVLG----------- 273

Query: 351 IDGLCKSGRLEIALELFRSLP---CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
                ++G+++ A E+FR +    CG   P++VTY+++I  LCN GQ++ A++LF+ M+ 
Sbjct: 274 -----RAGKIDEAYEIFRRMDDEGCG---PDLVTYTVLIDALCNAGQLENAKELFVKMKA 325

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
           N   P+ + +  L+  F    +     E   +M+    MPD    +I+VD+L K      
Sbjct: 326 NGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDE 385

Query: 468 SLPSFTVHEQQ 478
           +  +F V  +Q
Sbjct: 386 AFATFDVMRKQ 396



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 109/221 (49%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           HT  + + ++     + ++E   +++  M  K I+ D+  + T+F  L     + +   +
Sbjct: 120 HTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTV 179

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            ++M++ G   + ++Y   I  L ++G+  EA+E++  +     +  ++ Y++L+  L K
Sbjct: 180 LNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK 239

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
               E+ + L + +    L PNV T++I I  L   G++D+A ++F  M++    P+++T
Sbjct: 240 KRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVT 299

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + +LI       +     EL  KMK     PD  I   ++D
Sbjct: 300 YTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLD 340



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 6/139 (4%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GRV         +  +   PD + +  +I GL    R+ EA AL+ ++R  G  PD++TY
Sbjct: 977  GRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTY 1036

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +L+  L        A  ++EE+           EP+  TY  +I G       + A  +
Sbjct: 1037 NSLMLNLGLAGMVEQAKRMYEELQLAG------LEPDVFTYNALIRGYSLSENPEHAYTV 1090

Query: 122  LLQMKDKNIKPNVVTYTSV 140
               M      PN+ TY  +
Sbjct: 1091 YKNMMVDGCNPNIGTYAQL 1109


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 254/505 (50%), Gaps = 55/505 (10%)

Query: 6   HGFVVLG------RILK---SC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG+ + G      R+ K   SC   P      S I  L    R  EA  +F  + + G +
Sbjct: 323 HGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK 382

Query: 56  PDVFTYTTLVNGLCRTSHTIV--------------------------------------A 77
           PD+ +Y+T  + +C    T+V                                      A
Sbjct: 383 PDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKA 442

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           + +FE+M N     G++  P+TVT+ T+I  LC+ G +D A      M D  + P+   Y
Sbjct: 443 MLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVY 496

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQP-NVVTFNVIMDELCKNGKMDEASRLLDLMI 196
             +I+G C   +  +AK L  EMM++ + P  V  F+ I++ LCK G++ E   ++D+M+
Sbjct: 497 GCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMV 556

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           Q G RP+  T+N+L++G+CL G +  A  L  +M S+G +   + Y  L++GYCKN  I+
Sbjct: 557 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 616

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL+++ +ML KG+KP  V+++ +  GLF+  +   A K+F EM  +G      TY   +
Sbjct: 617 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVL 676

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            GLC+N    EA  L   L  +  +FDI  +N +I  + K GR + A ELF ++    LV
Sbjct: 677 GGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLV 736

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN+ TYS+MI  L  +   ++A +LF+ +E++    +    + ++R  +   E +K    
Sbjct: 737 PNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNY 796

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
           L  + E N+  +AS +S++  L ++
Sbjct: 797 LSIIGENNLTLEASTISLLASLFSR 821



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 225/458 (49%), Gaps = 11/458 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G  ++GR+LK+   PD  ++ SLI G   +  + +A  LF ++   G  P +    
Sbjct: 191 RPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICN 249

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +++  LC+      A ++ ++M +     G+   P+  TY+ IIDGLCK   +DKA+ +L
Sbjct: 250 SIIKELCKMKEMDKAESIVQKMVDS----GIA--PDLFTYSLIIDGLCKSKAMDKAERVL 303

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM +   +PN +TY S+I G+  +  WNE+ R+F +M   GV P V   N  +  L K+
Sbjct: 304 EQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKH 363

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC---LTGRVNHAKELFVSMESMGCKHTV 239
           G+ +EA  + D M+  G +PD  +Y+T     C   +T        +F  M + G     
Sbjct: 364 GRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNK 423

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             ++ILIN Y +   ++ A+ ++ +M +KG+ PD V   T+   L  I +++ A   F+ 
Sbjct: 424 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 483

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD-IRAYNSLIDGLCKSG 358
           M   GV      Y   I G C +G +V+A EL   +         ++ ++S+I+ LCK G
Sbjct: 484 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 543

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R+    ++   +      PNVVT++ ++ G C  G M++A  L   M    + PN   + 
Sbjct: 544 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 603

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            L+ G+ +       + +   M    V P + + SI++
Sbjct: 604 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 641



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 227/465 (48%), Gaps = 52/465 (11%)

Query: 42  AAALFTKLRVFGCE----PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCE 96
           A  LF ++  + C     P + TY  L++   R     + L +   +  NG G       
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG------- 208

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+  +Y+ +I G  K+G VDKA  L L+M ++ + P ++   S+I+  C  K+ ++A+ +
Sbjct: 209 PDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +M+D G+ P++ T+++I+D LCK+  MD+A R+L+ M++ G RP++ TYN+L+ G+ +
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           +G  N +  +F  M S G   TV + +  I+   K+     A  ++  M+ KG KPD++ 
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387

Query: 277 HNT---------------LFVGLFEI-----------------------HQVERAFKLFD 298
           ++T               ++  +F +                         +++A  +F+
Sbjct: 388 YSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 447

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +MQ  G+  DT T+ T I  LC+ G + +A+  F+ +  +        Y  LI G C  G
Sbjct: 448 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 507

Query: 359 RLEIALELFRSLPCGVLVPNVVTY-SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
            L  A EL   +    + P  V Y S +I  LC +G++ + +D+   M +    PNV+TF
Sbjct: 508 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 567

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + L+ G+  +    +   LL  M  I + P+  I   +VD   KN
Sbjct: 568 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 612



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 131/536 (24%), Positives = 233/536 (43%), Gaps = 80/536 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +   +++    P  +   S+IK LC    + +A ++  K+   G  PD+FTY
Sbjct: 224 GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTY 283

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG------------- 108
           + +++GLC++     A  + E+M     E G    PN++TY ++I G             
Sbjct: 284 SLIIDGLCKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHGYSISGMWNESVRV 337

Query: 109 ----------------------LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                                 L K G  ++AK +   M  K  KP++++Y++     CY
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCY 397

Query: 147 ---AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
                 W     +F  M+ +G+ PN   FN++++   + G MD+A  + + M   G+ PD
Sbjct: 398 WYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 457

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             T+ T++   C  GR++ A   F  M  +G   +   Y  LI G C + E+  A  L S
Sbjct: 458 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 517

Query: 264 EMLSK------------------------------------GIKPDVVIHNTLFVGLFEI 287
           EM++K                                    G +P+VV  N+L  G   +
Sbjct: 518 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 577

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             +E AF L D M   G+  + + Y T +DG CKNG I +A+ +F  +     +     Y
Sbjct: 578 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 637

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           + ++ GL ++ R   A ++F  +       ++ TY +++GGLC +   D+A  L   +  
Sbjct: 638 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 697

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             V  ++ITF+++I    ++    +  EL   +    ++P+    S+++  L K E
Sbjct: 698 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 753



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 12/337 (3%)

Query: 2   GRVSHGFVVLGRIL------KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           G  +HG +V  + L      K    P    F+S+I  LC E R+ E   +   +   G  
Sbjct: 502 GCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR 561

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V T+ +L+ G C   +   A  L + MA+      +  EPN   Y T++DG CK G +
Sbjct: 562 PNVVTFNSLMEGYCLVGNMEEAFALLDAMAS------IGIEPNCYIYGTLVDGYCKNGRI 615

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  +   M  K +KP  V Y+ ++ G   A+    AK++F EM++ G   ++ T+ V+
Sbjct: 616 DDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVV 675

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC+N   DEA+ LL+ +    V+ D  T+N ++      GR   AKELF ++ + G 
Sbjct: 676 LGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGL 735

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + +YS++I    K +  E A +L+  +   G   D  + N +   L    +V +A  
Sbjct: 736 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASN 795

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
               +  N +  +  T         + G   E ++L 
Sbjct: 796 YLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 832



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 6/211 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +L  +      P+   + +L+ G C   RI +A  +F  +   G +P    
Sbjct: 577 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 636

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GL +   T  A  +F EM        +       TY  ++ GLC+    D+A  
Sbjct: 637 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSI------HTYGVVLGGLCRNNCTDEANM 690

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL ++   N+K +++T+  VI          EAK LF  +   G+ PN+ T+++++  L 
Sbjct: 691 LLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI 750

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           K    +EA  L   + + G   D+   N ++
Sbjct: 751 KEESYEEADNLFISVEKSGHASDSRLLNHIV 781



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 5/140 (3%)

Query: 328 AVELFHTLRILKCEFD----IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
           A+ELF  +    C       I  YN LID   +  R ++ L +   L    L P+  +YS
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I G   DG++DKA  LFL+M E  V+P ++  + +I+   ++ E  K   ++ KM + 
Sbjct: 216 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 444 NVMPDASIVSIVVDLLAKNE 463
            + PD    S+++D L K++
Sbjct: 275 GIAPDLFTYSLIIDGLCKSK 294


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/435 (32%), Positives = 220/435 (50%), Gaps = 7/435 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + +T++ LI   C    +  A     K+     E  V+ Y +L+NG C+  +   A   F
Sbjct: 226 NHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYF 285

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM +          P  VTYT++I G C EG   KA ++  +M  K I PN  T+T++I
Sbjct: 286 DEMIDKG------LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAII 339

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C A    EA RLF EM ++ + P+ VT+NV+++  C++G + EA  LLD M+  G  
Sbjct: 340 SGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFV 399

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD +TY  L+ G C  GRV+ AKE    +     K     YS L++GYCK    + A+S 
Sbjct: 400 PDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSA 459

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              M+ +G+  D+V +  L  G    H     F L  EM  +G+  D   Y   ID   K
Sbjct: 460 CRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSK 519

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA  L+  +    C  ++  Y +LI+GLCK+G ++ A  L +      + PN +T
Sbjct: 520 AGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHIT 579

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y   +  L   G M+KA  L   M +   +   +++++LIRGF R+ +  +  +LLH M 
Sbjct: 580 YGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMT 638

Query: 442 EINVMPDASIVSIVV 456
           + +++PD    S ++
Sbjct: 639 DNDILPDYITYSTII 653



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 204/406 (50%), Gaps = 15/406 (3%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V T + L+NGL R       L LF+++ + N       +P+   Y+ ++  LC+    
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSAN------VQPDIYIYSAVVRSLCELKDF 147

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           +KAKE++  M+    K ++V Y  +I G C ++   EA  +   +M +G++ NVVT+   
Sbjct: 148 NKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY-- 205

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
                  GK +EA  L   M + G+  +  TY+ L+D FC  G +++A      M     
Sbjct: 206 -------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASI 258

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           + TV+ Y+ LINGYCK      A   + EM+ KG+ P VV + +L  G     +  +AFK
Sbjct: 259 EFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFK 318

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +++EM   G++ +T+T+   I GLC+   + EA+ LF  ++  K       YN +I+G C
Sbjct: 319 VYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHC 378

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +SG +  A  L   +     VP+  TY  +I GLC+ G++ +A++   D+ ++    N +
Sbjct: 379 RSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNM 438

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +  L+ G+ +       +     M E  V  D    +I++D  A+
Sbjct: 439 CYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAR 484



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 219/485 (45%), Gaps = 51/485 (10%)

Query: 13  RILKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
           R++K C   P+  T ++L+ GL    R  +   LF  +     +PD++ Y+ +V  LC  
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                A  +   M     EF   C+ + V Y  +I GLCK   + +A E+   +  K ++
Sbjct: 145 KDFNKAKEMIHWM-----EFNQ-CKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLE 198

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
            NVVTY        Y K +NEA+ LF EM ++G+  N +T+++++D  C+ G+MD A   
Sbjct: 199 ANVVTY--------YGK-FNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGF 249

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           LD M +  +    + YN+L++G+C  G  + AK  F  M   G   TV +Y+ LI+GYC 
Sbjct: 250 LDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCN 309

Query: 252 NKEIEGALSLYSEMLSKGIKPDV-----------------------------------VI 276
             E   A  +Y+EM +KGI P+                                    V 
Sbjct: 310 EGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVT 369

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N +  G      +  AF L DEM   G   DT+TYR  I GLC  G + EA E    L 
Sbjct: 370 YNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLH 429

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + +   Y++L+ G CK GR + A+   R +    +  ++V Y+I+I G   +    
Sbjct: 430 KDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTR 489

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
               L  +M  + + P+ + +  +I    +     +   L   M +   +P+    + ++
Sbjct: 490 ALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALI 549

Query: 457 DLLAK 461
           + L K
Sbjct: 550 NGLCK 554



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 216/444 (48%), Gaps = 15/444 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G  S        ++    TP  VT+TSLI G C E    +A  ++ ++   G  P+ +T
Sbjct: 275 LGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYT 334

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T +++GLCR +    A+ LF EM     E  ++  P+ VTY  +I+G C+ G + +A  
Sbjct: 335 FTAIISGLCRANMMAEAIRLFGEMK----ERKIM--PSEVTYNVMIEGHCRSGNISEAFH 388

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  K   P+  TY  +I G C     +EAK    ++     + N + ++ ++   C
Sbjct: 389 LLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYC 448

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF---VSMESMGCKH 237
           K G+  +A     +M++ GV  D   Y  L+DG   T R +  + LF     M + G + 
Sbjct: 449 KEGRFKDAVSACRVMVERGVAMDLVCYAILIDG---TAREHDTRALFGLLKEMHNHGLRP 505

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
               Y+ +I+ + K   ++ A  L+  M+ +G  P+VV +  L  GL +   +++A  L 
Sbjct: 506 DAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLS 565

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR-AYNSLIDGLCK 356
            E   + V  +  TY  F+D L + G + +AV+L H +  LK       +YN LI G C+
Sbjct: 566 KETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM--LKGFLATTVSYNILIRGFCR 623

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G++E A +L   +    ++P+ +TYS +I   C    + +A  L+  M +  + P+ + 
Sbjct: 624 LGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLA 683

Query: 417 FDMLIRGFIRINEPSKVIELLHKM 440
           +  L+ G     E  K  EL  +M
Sbjct: 684 YSFLVHGCCIAGELEKAFELRDEM 707



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 159/348 (45%), Gaps = 42/348 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL------------ 49
           G +S  F +L  ++   F PD  T+  LI GLC+  R+ EA      L            
Sbjct: 381 GNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCY 440

Query: 50  --------------------RVF---GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
                               RV    G   D+  Y  L++G  R   T     L +EM N
Sbjct: 441 SALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHN 500

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                     P+ V YT +ID   K G + +A  L   M D+   PNVVTYT++I G C 
Sbjct: 501 HG------LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCK 554

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           A   ++A+ L  E +   V PN +T+   +D L + G M++A +L   M++ G      +
Sbjct: 555 AGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVS 613

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YN L+ GFC  G++  A +L   M          +YS +I   CK   ++ A+ L+  ML
Sbjct: 614 YNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTML 673

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            KG+KPD + ++ L  G     ++E+AF+L DEM R G+ ++  T ++
Sbjct: 674 DKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVTPKS 721


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/431 (32%), Positives = 232/431 (53%), Gaps = 13/431 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M R+     VL R+    F+PD VT+  +I  LC+  ++  A  +  +L    C+P V T
Sbjct: 167 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVIT 226

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+           AL L +EM +         +P+  TY TII G+CKEG VD+A E
Sbjct: 227 YTILIEATMLEGGVDEALKLLDEMLSRG------LKPDMFTYNTIIRGMCKEGMVDRAFE 280

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++  ++ K  +P+V++Y  ++R       W E ++L  +M  +   PNVVT+++++  LC
Sbjct: 281 MIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 340

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           ++GK++EA  LL LM + G+ PDA++Y+ L+  FC  GR++ A E   +M S GC   + 
Sbjct: 341 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 400

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++   CKN + + AL ++ ++   G  P+   +NT+F  L+      RA  +  EM
Sbjct: 401 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 460

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSG 358
             NG+  D  TY + I  LC+ G + +A EL   +R   CEF   +  YN ++ G CK+ 
Sbjct: 461 VSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMR--SCEFHPSVVTYNIVLLGFCKAH 518

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE-NAVVPNVITF 417
           R+E A+++  S+      PN  TY+++I G+   G   +A +L  D+   NA+  +  +F
Sbjct: 519 RIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAI--SEYSF 576

Query: 418 DMLIRGFIRIN 428
             L R F  +N
Sbjct: 577 KRLHRTFPLLN 587



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 230/448 (51%), Gaps = 7/448 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +++  + PD +  T LIKG      + +A  +   L  FG +PDVF Y  L+NG C
Sbjct: 107 LLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGFC 165

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           + +    A  + + M + +        P+TVTY  +I  LC  G +D A ++L Q+   N
Sbjct: 166 KMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN 219

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +P V+TYT +I         +EA +L  EM+ +G++P++ T+N I+  +CK G +D A 
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 279

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            ++  +   G  PD  +YN LL      G+    ++L   M S  C   V +YSILI   
Sbjct: 280 EMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 339

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C++ +IE A++L   M  KG+ PD   ++ L        +++ A +  + M  +G   D 
Sbjct: 340 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 399

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y T +  LCKNG   +A+E+F  L  + C  +  +YN++   L  SG    AL +   
Sbjct: 400 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P+ +TY+ MI  LC +G +DKA +L +DM      P+V+T+++++ GF + + 
Sbjct: 460 MVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 519

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVD 457
               I++L  M      P+ +  +++++
Sbjct: 520 IEDAIDVLDSMVGNGCRPNETTYTVLIE 547



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 194/393 (49%), Gaps = 7/393 (1%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR+ + I +L+L E M            P+ +  T +I G      V KA  ++ ++ +K
Sbjct: 96  CRSGNYIESLHLLETMVRKG------YNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEK 148

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             +P+V  Y ++I GFC     ++A R+   M  +   P+ VT+N+++  LC  GK+D A
Sbjct: 149 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 208

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++LD ++    +P   TY  L++   L G V+ A +L   M S G K  +F+Y+ +I G
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK   ++ A  +   +  KG +PDV+ +N L   L    + E   KL  +M       +
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY   I  LC++G I EA+ L   ++      D  +Y+ LI   C+ GRL++A+E   
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           ++     +P++V Y+ ++  LC +G+ D+A ++F  + E    PN  +++ +        
Sbjct: 389 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  + + ++ +M    + PD    + ++  L +
Sbjct: 449 DKIRALHMILEMVSNGIDPDEITYNSMISCLCR 481



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 160/318 (50%), Gaps = 1/318 (0%)

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C + ++ E+  L   M+ +G  P+V+    ++        + +A R+++++ + G +PD 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
           F YN L++GFC   R++ A  +   M S        +Y+I+I   C   +++ AL +  +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           +LS   +P V+ +  L         V+ A KL DEM   G+  D +TY T I G+CK G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A E+   L +  CE D+ +YN L+  L   G+ E   +L   +      PNVVTYSI
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  LC DG++++A +L   M+E  + P+  ++D LI  F R       IE L  M    
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 445 VMPDASIVSIVVDLLAKN 462
            +PD    + V+  L KN
Sbjct: 395 CLPDIVNYNTVLATLCKN 412


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 233/489 (47%), Gaps = 40/489 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++H     G +LKS   P+  T+ +LI   C  + + +A A   ++R  G  PD FTY 
Sbjct: 70  RLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYN 129

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+ GLCR      A  LF +M    G     C  +  +YT +I GLC  G +D A  + 
Sbjct: 130 CLMLGLCRAGLLAAACGLFVQMPRRWG----ACY-DRYSYTILIKGLCAAGRIDDACRVF 184

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M     +P V TYT ++ G C  +   EA+ L  EM+++GV PNVVT+N ++  LC+ 
Sbjct: 185 AKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQE 244

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+ D+ ++LL+ M      PD +TY  ++ G C  G+V H  ++       G    V +Y
Sbjct: 245 GRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTY 304

Query: 243 SILINGYCKNKEIEGAL-----------------------------------SLYSEMLS 267
           + LINGYCK  +++ AL                                   +  ++M  
Sbjct: 305 NALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAG 364

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            G+ P+ V  N+L  G   + + + A +L D M+  GV  D  TY  FID LC  G + E
Sbjct: 365 AGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEE 424

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  LF  L +   +     Y SL+ G C+ G ++ A  L   +     +P+V TY+ +I 
Sbjct: 425 AHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLID 484

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           GLC   ++D+A DL   M++  + P   TF++LI+  +   + +   ++  +M      P
Sbjct: 485 GLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKP 544

Query: 448 DASIVSIVV 456
           D    ++ +
Sbjct: 545 DKQTYTLKI 553



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 229/495 (46%), Gaps = 45/495 (9%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           FV + R   +C+  D  ++T LIKGLCA  RI +A  +F K+    C P V TYT L++G
Sbjct: 148 FVQMPRRWGACY--DRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDG 205

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           LC+      A  L  EM N     GVV  PN VTY  +I GLC+EG  D   +LL +M+ 
Sbjct: 206 LCKVRRVGEAEALLGEMVNK----GVV--PNVVTYNALIGGLCQEGRFDDVTKLLEKMEI 259

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           +   P+  TYT V+ G C         ++  E + +GV   V+T+N +++  CK G M  
Sbjct: 260 QRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKA 319

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  +L LM ++ V P   T+N ++ GFC  G+V+ A      M   G      +++ LI+
Sbjct: 320 ALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLIS 379

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G C   E + AL L   M   G+ PD   +      L +  Q+E A  LF  +   G+ A
Sbjct: 380 GQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKA 439

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
               Y + + G C+ G I  A  L   +    C  D+  YN+LIDGLCK  RL+ A++L 
Sbjct: 440 HNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLL 499

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF------------------------- 402
             +    + P   T++I+I  +  D +   A  ++                         
Sbjct: 500 DKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFE 559

Query: 403 ------------LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
                       ++M E  V P+V T++ +I+ ++      K      KM  + + PD +
Sbjct: 560 GATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCT 619

Query: 451 IVSIVVDLLAKNEIS 465
             SI+++ +   + S
Sbjct: 620 TYSILLNYMCNKDDS 634



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 206/425 (48%), Gaps = 7/425 (1%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           R+    A F  +   G  P+  TY TL+N  C+ +    A      M     E G+   P
Sbjct: 70  RLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMR----EAGLA--P 123

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           +T TY  ++ GLC+ G +  A  L +QM  +     +  +YT +I+G C A   ++A R+
Sbjct: 124 DTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRV 183

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F +M     +P V T+ V++D LCK  ++ EA  LL  M+  GV P+  TYN L+ G C 
Sbjct: 184 FAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQ 243

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR +   +L   ME        ++Y+ +++G CK+ ++     +  E + KG+  +V+ 
Sbjct: 244 EGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLT 303

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L  G  +   ++ A  +   M+RN V     T+   I G C  G + +A+     + 
Sbjct: 304 YNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMA 363

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 +   +NSLI G C  G  +IAL L   +    ++P+  TY+I I  LC++GQ++
Sbjct: 364 GAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLE 423

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A  LF  +    +  + + +  L+ G+ ++ +      L+ KM   N MPD    + ++
Sbjct: 424 EAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLI 483

Query: 457 DLLAK 461
           D L K
Sbjct: 484 DGLCK 488



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/534 (26%), Positives = 219/534 (41%), Gaps = 98/534 (18%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     +LG ++     P+ VT+ +LI GLC E R  +   L  K+ +    PD +TYT
Sbjct: 211 RVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYT 270

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +V+GLC+         +  E A G G   V  E   +TY  +I+G CK G +  A ++L
Sbjct: 271 QVVHGLCKHGKVGHGAKVLHE-AIGKG---VALE--VLTYNALINGYCKGGDMKAALDVL 324

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             MK   + P V T+  VI GFC     ++A     +M   G+ PN VTFN ++   C  
Sbjct: 325 QLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSV 384

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+   A RLLDLM ++GV PD  TY   +D  C  G++  A  LF  +   G K     Y
Sbjct: 385 GERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIY 444

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF-------- 294
           + L++GYC+  +I+ A  L  +M S+   PDV  +NTL  GL ++ +++RA         
Sbjct: 445 TSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKK 504

Query: 295 ---------------------------KLFDEMQRNGVAADTWTYR-----TFIDGLCKN 322
                                      K++++M  +G   D  TY       + +G  K 
Sbjct: 505 QGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKE 564

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL------------------ 364
             I  AV   H   +     D+  YN++I     +G  E A                   
Sbjct: 565 ENIDMAVVEMHEAGVFP---DVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTY 621

Query: 365 -------------------------------ELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
                                          ELF  +      P + TY  ++ GLCN  
Sbjct: 622 SILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQC 681

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           ++++   L L M+ N+++ +    D L+  +  +    +  E    M   +  P
Sbjct: 682 RLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQP 735



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 222/515 (43%), Gaps = 67/515 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     VL  + ++   P   TF  +I G C   ++ +A A  T++   G  P+  T+
Sbjct: 315 GDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTF 374

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++G C      +AL L + M     E+GV+  P+  TY   ID LC EG +++A  L
Sbjct: 375 NSLISGQCSVGERKIALRLLDLME----EYGVL--PDRQTYAIFIDALCDEGQLEEAHSL 428

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K IK + V YTS++ G+C   D + A  L  +M  +   P+V T+N ++D LCK
Sbjct: 429 FSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCK 488

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++D A  LLD M + G+ P   T+N L+       +   A +++  M S GCK    +
Sbjct: 489 VKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQT 548

Query: 242 YSILIN-----GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           Y++ I+     G  K + I+ A+    EM   G+ PDV  +N +     +    E+AF  
Sbjct: 549 YTLKISTDWFEGATKEENIDMAVV---EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFA 605

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCK--------NGYIVEAVELFHTLRILK--CEFD--- 343
             +M    +  D  TY   ++ +C         N  I + V++ +   + +  CE D   
Sbjct: 606 HVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAP 665

Query: 344 -IRAYNSLIDGLCKSGRLEI-----------------------------------ALELF 367
            I  Y +L+ GLC   RLE                                    A E F
Sbjct: 666 GISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQF 725

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
           RS+      P + +  +++ GLC+ G    A  +F DM       + + + +LI      
Sbjct: 726 RSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEK 785

Query: 428 NEPSKVIELLHKMKEINVMPD----ASIVSIVVDL 458
                 +E+L  M     +      AS+V +V +L
Sbjct: 786 GHAGACLEMLSVMDAKKCVASTRTYASLVRLVAEL 820



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 151/370 (40%), Gaps = 28/370 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F ++ ++      PD  T+ +LI GLC   R+  A  L  K++  G EP   T
Sbjct: 454 VGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCT 513

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTII-----DGLCKEGFV 115
           +  L+  +        A  ++E+M +        C+P+  TYT  I     +G  KE  +
Sbjct: 514 FNILIKQMLWDKKHADAAKMYEQMISSG------CKPDKQTYTLKISTDWFEGATKEENI 567

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A   +++M +  + P+V TY ++I+ +  A    +A    ++M+   + P+  T++++
Sbjct: 568 DMA---VVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSIL 624

Query: 176 MDELCKNGKMD--------------EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           ++ +C     D                  L + M +    P   TY  LL G C   R+ 
Sbjct: 625 LNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLE 684

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
             + L + M+             L+  YC  +    A   +  M  +  +P +     L 
Sbjct: 685 EVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLL 744

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL +      A  +F +M   G   D   ++  ID L + G+    +E+   +   KC 
Sbjct: 745 SGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCV 804

Query: 342 FDIRAYNSLI 351
              R Y SL+
Sbjct: 805 ASTRTYASLV 814



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 1/205 (0%)

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+ +  ML  G  P+   +NTL     ++  +  A      M+  G+A DT+TY   + G
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 319 LCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           LC+ G +  A  LF  + R     +D  +Y  LI GLC +GR++ A  +F  +  G   P
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
            V TY++++ GLC   ++ +A  L  +M    VVPNV+T++ LI G  +      V +LL
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLL 254

Query: 438 HKMKEINVMPDASIVSIVVDLLAKN 462
            KM+     PD    + VV  L K+
Sbjct: 255 EKMEIQRHSPDCWTYTQVVHGLCKH 279


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 242/483 (50%), Gaps = 42/483 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V  ++++    PD    + ++   C + ++ EAA    K+   G EP++ TY
Sbjct: 205 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 264

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NG         A  + + M+    E GV    N VTYT +I G CK+  +D+A+++
Sbjct: 265 HSLINGYVSLGDVEAAKGVLKFMS----EKGV--SRNVVTYTLLIKGYCKQCKMDEAEKV 318

Query: 122 LLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  M+++  + P+   Y  +I G+C     ++A RL  EM+  G++ N+   N +++  C
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 378

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ EA  ++  M+   ++PD+++YNTLLDG+C  G  + A  L   M   G + TV 
Sbjct: 379 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 438

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+ G C+    + AL ++  M+  G+ PD V ++TL  GLF++   E A  L+ ++
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS--- 357
              G      T+ T I GLCK G +VEA E+F  ++ L C  D   Y +LIDG CK+   
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 358 -------GRLE-----IALELFRSLPCGV--------------------LVPNVVTYSIM 385
                  G +E      ++E++ SL  G+                    L PN+VTY  +
Sbjct: 559 GQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGAL 618

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G C +G +DKA   + +M EN +  N+I    ++ G  R+    +   L+ KM +   
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678

Query: 446 MPD 448
            PD
Sbjct: 679 FPD 681



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 238/528 (45%), Gaps = 73/528 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  +L+     +     SLI G C    I EA  + T++  +  +PD ++Y
Sbjct: 346 GKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSY 405

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G CR  HT  A NL ++M     + G+  EP  +TY T++ GLC+ G  D A ++
Sbjct: 406 NTLLDGYCREGHTSEAFNLCDKML----QEGI--EPTVLTYNTLLKGLCRVGAFDDALQI 459

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M    + P+ V Y++++ G    +++  A  L+ +++ +G   + +TFN ++  LCK
Sbjct: 460 WHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 519

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA------------------ 223
            GKM EA  + D M   G  PD  TY TL+DG+C    V  A                  
Sbjct: 520 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEM 579

Query: 224 -----------------KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                             +L   M   G    + +Y  LI+G+CK   ++ A S Y EM 
Sbjct: 580 YNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD------------------ 308
             G+  +++I +T+  GL+ + +++ A  L  +M  +G   D                  
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 699

Query: 309 --------------TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                            Y   I GLCK G + +A   F  L +     D   Y +LI G 
Sbjct: 700 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
             +G ++ A  L   +    LVPN+VTY+ +I GLC    +D+A+ LF  + +  + PNV
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 819

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +T++ LI G+ +I       +L  KM E  + P     S +++ L K+
Sbjct: 820 VTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKH 867



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 228/446 (51%), Gaps = 9/446 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+P    F  ++K    +     A  +F  +   G  P + +  +L+N L +   T  A 
Sbjct: 154 FSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 211

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            ++++M       G+V  P+    + +++  CK+G VD+A   + +M++  ++PN+VTY 
Sbjct: 212 YVYQQMI----RVGIV--PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 265

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I G+    D   AK +   M ++GV  NVVT+ +++   CK  KMDEA ++L  M + 
Sbjct: 266 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325

Query: 199 G-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
             + PD   Y  L+DG+C TG+++ A  L   M  +G K  +F  + LINGYCK  EI  
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  + + M+   +KPD   +NTL  G         AF L D+M + G+     TY T + 
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLC+ G   +A++++H +       D   Y++L+DGL K    E A  L++ +       
Sbjct: 446 GLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 505

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + +T++ MI GLC  G+M +A ++F  M++    P+ IT+  LI G+ + +   +  ++ 
Sbjct: 506 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVK 565

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNE 463
             M+   + P   + + ++  L K+ 
Sbjct: 566 GAMEREXISPSIEMYNSLISGLFKSR 591



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 221/436 (50%), Gaps = 24/436 (5%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           IL   FT   +TF ++I GLC   +++EA  +F K++  GC PD  TY TL++G C+ S+
Sbjct: 498 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASN 557

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  +   M            P+   Y ++I GL K   + +  +LL +M  + + PN
Sbjct: 558 VGQAFKVKGAMERE------XISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPN 611

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           +VTY ++I G+C     ++A   + EM + G+  N++  + ++  L + G++DEA+ L+ 
Sbjct: 612 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQ 671

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHA--KELFVSMESMGCKHTVFS----YSILIN 247
            M+ HG  PD   +        L   + +A  +++  S++   CK  +      Y+I I 
Sbjct: 672 KMVDHGFFPDHECF--------LKSDIRYAAIQKIADSLDE-SCKTFLLPNNIVYNIAIA 722

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G CK  +++ A   +S +  KG  PD   + TL  G      V+ AF+L DEM R G+  
Sbjct: 723 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVP 782

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  TY   I+GLCK+  +  A  LFH L       ++  YN+LIDG CK G ++ A +L 
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 842

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    + P+VVTYS +I GLC  G ++++  L   M +  V   +I +  L++G  + 
Sbjct: 843 DKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKT 902

Query: 428 ---NEPSKVIELLHKM 440
              NE SK   L   M
Sbjct: 903 SNYNEMSKPEALKQNM 918



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 229/505 (45%), Gaps = 61/505 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V+ R++     PD+ ++ +L+ G C E    EA  L  K+   G EP V TY
Sbjct: 381 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440

Query: 62  TTLVNGLCRTSHTIVALNLFE----------------------EMANGNGEFGVVCE--- 96
            TL+ GLCR      AL ++                       +M N  G   +  +   
Sbjct: 441 NTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                + +T+ T+I GLCK G + +A+E+  +MKD    P+ +TY ++I G+C A +  +
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 560

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A ++   M  + + P++  +N ++  L K+ ++ E + LL  M   G+ P+  TY  L+D
Sbjct: 561 AFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALID 620

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C  G ++ A   +  M   G    +   S +++G  +   I+ A  L  +M+  G  P
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680

Query: 273 DV--------------------------------VIHNTLFVGLFEIHQVERAFKLFDEM 300
           D                                 +++N    GL +  +V+ A + F  +
Sbjct: 681 DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 740

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D +TY T I G    G + EA  L   +       +I  YN+LI+GLCKS  +
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  LF  L    L PNVVTY+ +I G C  G MD A  L   M E  + P+V+T+  L
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860

Query: 421 IRGFIRINEPSKVIELLHKMKEINV 445
           I G  +  +  + ++LL++M +  V
Sbjct: 861 INGLCKHGDIERSMKLLNQMIKAGV 885



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 188/385 (48%), Gaps = 38/385 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++     +  ++     +PD +T+ +LI G C  S + +A  +   +      P +  
Sbjct: 520 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEM 579

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++GL ++   +   +L  EM    G  G+   PN VTY  +IDG CKEG +DKA  
Sbjct: 580 YNSLISGLFKSRRLVEXTDLLTEM----GIRGLT--PNIVTYGALIDGWCKEGMLDKAFS 633

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---------------- 164
              +M +  +  N++  ++++ G       +EA  L  +M+D G                
Sbjct: 634 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA 693

Query: 165 ----------------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
                           + PN + +N+ +  LCK GK+D+A R   ++   G  PD FTY 
Sbjct: 694 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC 753

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           TL+ G+   G V+ A  L   M   G    + +Y+ LING CK++ ++ A  L+ ++  K
Sbjct: 754 TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G+ P+VV +NTL  G  +I  ++ AFKL D+M   G++    TY   I+GLCK+G I  +
Sbjct: 814 GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERS 873

Query: 329 VELFHTLRILKCEFDIRAYNSLIDG 353
           ++L + +     +  +  Y +L+ G
Sbjct: 874 MKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 180/388 (46%), Gaps = 20/388 (5%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---NIKPNVV--TYTSVIRGFCYAKD- 149
            PN  +Y  ++  L +    D+ +  L Q+ D      + NV+      V R F ++   
Sbjct: 99  RPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTV 158

Query: 150 -------------WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
                           A  +F  M   G  P++ + N +++ L KNG+   A  +   MI
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G+ PD F  + +++ FC  G+V+ A      ME++G +  + +Y  LINGY    ++E
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG-VAADTWTYRTF 315
            A  +   M  KG+  +VV +  L  G  +  +++ A K+   MQ    +  D   Y   
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           IDG C+ G I +AV L   +  L  + ++   NSLI+G CK G +  A  +   +    L
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+  +Y+ ++ G C +G   +A +L   M +  + P V+T++ L++G  R+      ++
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + H M +  V PD    S ++D L K E
Sbjct: 459 IWHLMMKXGVAPDEVGYSTLLDGLFKME 486



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 123/220 (55%), Gaps = 6/220 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K+   P+ + +   I GLC   ++ +A   F+ L + G  PD FTY TL++G     +  
Sbjct: 707 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 766

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  L +EM       G+V  PN VTY  +I+GLCK   VD+A+ L  ++  K + PNVV
Sbjct: 767 EAFRLRDEML----RRGLV--PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV 820

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY ++I G+C   + + A +L  +M+++G+ P+VVT++ +++ LCK+G ++ + +LL+ M
Sbjct: 821 TYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           I+ GV      Y TL+ G   T   N   +     ++M C
Sbjct: 881 IKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNMNC 920



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 38/73 (52%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  ++++   +P  VT+++LI GLC    I  +  L  ++   G +  +  
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891

Query: 61  YTTLVNGLCRTSH 73
           Y TLV G  +TS+
Sbjct: 892 YCTLVQGGFKTSN 904


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 227/429 (52%), Gaps = 7/429 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T+  +I  +C E  +  A  LF +++  G  PD  TY ++++G  +       +  
Sbjct: 128 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 187

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FEEM +      + CEP+ +TY  +I+  CK G +    E   +MK   +KPNVV+Y+++
Sbjct: 188 FEEMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 241

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  FC      +A + +++M   G+ PN  T+  ++D  CK G + +A RL + M+Q GV
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 301

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             +  TY  L+DG C   R+  A+ELF  M++ G    + SY+ LI+G+ K K ++ AL 
Sbjct: 302 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 361

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L +E+  +GIKPD++++ T   GL  + ++E A  + +EM+  G+ A++  Y T +D   
Sbjct: 362 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 421

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV-LVPNV 379
           K+G   E + L   ++ L  E  +  +  LIDGLCK+  +  A++ F  +     L  N 
Sbjct: 422 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 481

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             ++ MI GLC D Q++ A  LF  M +  +VP+   +  L+ G  +     + + L  K
Sbjct: 482 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 541

Query: 440 MKEINVMPD 448
           M EI +  D
Sbjct: 542 MAEIGMKLD 550



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/434 (31%), Positives = 218/434 (50%), Gaps = 13/434 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             PD VT+ S+I G     R+ +    F +++   CEPDV TY  L+N  C+     + L
Sbjct: 161 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 220

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
             + EM  GNG      +PN V+Y+T++D  CKEG + +A +  + M+   + PN  TYT
Sbjct: 221 EFYREM-KGNG-----LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 274

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I   C   + ++A RL  EM+  GV+ NVVT+  ++D LC   +M EA  L   M   
Sbjct: 275 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 334

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV P+  +YN L+ GF     ++ A EL   ++  G K  +  Y   I G C  ++IE A
Sbjct: 335 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 394

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             + +EM   GIK + +I+ TL    F+         L DEM+   +     T+   IDG
Sbjct: 395 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 454

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRA----YNSLIDGLCKSGRLEIALELFRSLPCGV 374
           LCKN  + +AV+ F+ +     +F ++A    + ++IDGLCK  ++E A  LF  +    
Sbjct: 455 LCKNKLVSKAVDYFNRI---SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 511

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           LVP+   Y+ ++ G    G + +A  L   M E  +  +++ +  L+ G    N+  K  
Sbjct: 512 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 571

Query: 435 ELLHKMKEINVMPD 448
             L +M    + PD
Sbjct: 572 SFLEEMIGEGIHPD 585



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 206/389 (52%), Gaps = 3/389 (0%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           VC P    +  +   L   G +++A +   +MK   + P   +   ++  F      ++ 
Sbjct: 55  VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 114

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           KR F +M+  G +P V T+N+++D +CK G ++ A  L + M   G+ PD  TYN+++DG
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           F   GR++     F  M+ M C+  V +Y+ LIN +CK  ++   L  Y EM   G+KP+
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV ++TL     +   +++A K + +M+R G+  + +TY + ID  CK G + +A  L +
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +  +  E+++  Y +LIDGLC + R++ A ELF  +    ++PN+ +Y+ +I G     
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            MD+A +L  +++   + P+++ +   I G   + +      ++++MKE  +  ++ I +
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414

Query: 454 IVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
            ++D   K   S N      + ++ +E+D
Sbjct: 415 TLMDAYFK---SGNPTEGLHLLDEMKELD 440



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 223/448 (49%), Gaps = 15/448 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++  G      +  +   P+ V++++L+   C E  + +A   +  +R  G  P+ +TY
Sbjct: 214 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 273

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++  C+  +   A  L  EM        V  E N VTYT +IDGLC    + +A+EL
Sbjct: 274 TSLIDANCKIGNLSDAFRLGNEM------LQVGVEWNVVTYTALIDGLCDAERMKEAEEL 327

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + PN+ +Y ++I GF  AK+ + A  L  E+  +G++P+++ +   +  LC 
Sbjct: 328 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 387

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K++ A  +++ M + G++ ++  Y TL+D +  +G       L   M+ +  + TV +
Sbjct: 388 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 447

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +LI+G CKNK +  A+  ++ + +  G++ +  I   +  GL + +QVE A  LF++M
Sbjct: 448 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 507

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + G+  D   Y + +DG  K G ++EA+ L   +  +  + D+ AY SL+ GL    +L
Sbjct: 508 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQL 567

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL--------FLDMEENAVVP 412
           + A      +    + P+ V    ++      G +D+A +L         L  + +  +P
Sbjct: 568 QKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALP 627

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKM 440
           N+ +   L+       + +++  L  K+
Sbjct: 628 NIYSDQNLVSSREHEEQETRISNLQPKL 655



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 221/457 (48%), Gaps = 10/457 (2%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F VL      C  P    F +L   L     + EA   F+K++ F   P   +   L++ 
Sbjct: 46  FDVLWSTRNVC-VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 104

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
             +   T      F++M       G    P   TY  +ID +CKEG V+ A+ L  +MK 
Sbjct: 105 FAKLGKTDDVKRFFKDM------IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 158

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + + P+ VTY S+I GF      ++    F EM D   +P+V+T+N +++  CK GK+  
Sbjct: 159 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
                  M  +G++P+  +Y+TL+D FC  G +  A + +V M  +G     ++Y+ LI+
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 278

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
             CK   +  A  L +EML  G++ +VV +  L  GL +  +++ A +LF +M   GV  
Sbjct: 279 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 338

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  +Y   I G  K   +  A+EL + L+    + D+  Y + I GLC   ++E A  + 
Sbjct: 339 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 398

Query: 368 RSLP-CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
             +  CG+   N + Y+ ++      G   +   L  +M+E  +   V+TF +LI G  +
Sbjct: 399 NEMKECGIKA-NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 457

Query: 427 INEPSKVIELLHKMK-EINVMPDASIVSIVVDLLAKN 462
               SK ++  +++  +  +  +A+I + ++D L K+
Sbjct: 458 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 494



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 228/483 (47%), Gaps = 19/483 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+         +   C  PD +T+ +LI   C   ++      + +++  G +P+V +
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TLV+  C+      A+  + +M       G+V  PN  TYT++ID  CK G +  A  
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMR----RVGLV--PNEYTYTSLIDANCKIGNLSDAFR 291

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M    ++ NVVTYT++I G C A+   EA+ LF +M   GV PN+ ++N ++    
Sbjct: 292 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 351

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   MD A  LL+ +   G++PD   Y T + G C   ++  AK +   M+  G K    
Sbjct: 352 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 411

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ L++ Y K+      L L  EM    I+  VV    L  GL +   V +A   F+ +
Sbjct: 412 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 471

Query: 301 QRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
             + G+ A+   +   IDGLCK+  +  A  LF  +       D  AY SL+DG  K G 
Sbjct: 472 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 531

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN-VITFD 418
           +  AL L   +    +  +++ Y+ ++ GL +  Q+ KAR    +M    + P+ V+   
Sbjct: 532 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 591

Query: 419 MLIRGFIR--INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
           +L + +    I+E  ++   L K + +    D ++ +I  D          +L S   HE
Sbjct: 592 VLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPNIYSD---------QNLVSSREHE 642

Query: 477 QQE 479
           +QE
Sbjct: 643 EQE 645


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 138/424 (32%), Positives = 222/424 (52%), Gaps = 7/424 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L     P+  T+  L++ LC      EA ++   +R  GC+P+  TY TLV   CR   
Sbjct: 148 MLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGE 207

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  L + M  G        +PN VT+ ++++G+CK G ++ A+++  +M  + + P+
Sbjct: 208 VDRAERLVDMMREGG------LKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPD 261

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            V+Y +++ G+C     +EA  +F EM  +G+ P+VVTF  ++  +CK G ++ A  L+ 
Sbjct: 262 GVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVR 321

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M + G++ +  T+  L+DGFC  G ++ A      M     + +V  Y+ LINGYC   
Sbjct: 322 EMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVG 381

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++ A  L  EM +KG+KPDVV ++T+     +      AF+L  +M  NGV  D  TY 
Sbjct: 382 RMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYS 441

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I  LC+   + +A  LF  +  L  + D   Y SLIDG CK G +E AL L   +   
Sbjct: 442 SLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKA 501

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            ++P+VVTYS++I GL    +  +A+ L   +     VP  I +D L+R   R  E   V
Sbjct: 502 GVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR-CCRNAELKSV 560

Query: 434 IELL 437
           + LL
Sbjct: 561 LALL 564



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 224/429 (52%), Gaps = 7/429 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + P  + + +++  L +++ +  A   F  +   G  P+V+TY  LV  LC   H   AL
Sbjct: 119 YAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++  +M       G  C+PN VTY T++   C+ G VD+A+ L+  M++  +KPN+VT+ 
Sbjct: 178 SVLRDMR------GAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFN 231

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           SV+ G C A    +A+++F EM+ +G+ P+ V++N ++   CK G   EA  +   M + 
Sbjct: 232 SVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK 291

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  T+ +L+   C  G +  A  L   M   G +    +++ LI+G+CK   ++ A
Sbjct: 292 GIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA 351

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L    EM    I+P VV +N L  G   + +++ A +L  EM+  GV  D  TY T +  
Sbjct: 352 LLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSA 411

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CKNG    A +L   +       D   Y+SLI  LC+  RL  A  LF+++    L P+
Sbjct: 412 YCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPD 471

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VTY+ +I G C +G +++A  L  +M +  V+P+V+T+ +LI G  +     +   LL 
Sbjct: 472 EVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLF 531

Query: 439 KMKEINVMP 447
           K+     +P
Sbjct: 532 KLYHEEPVP 540



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 238/462 (51%), Gaps = 23/462 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     V   ++K    PD V++ +L+ G C      EA ++F ++   G  PDV T+
Sbjct: 241 GRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTF 300

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++ +C+  +   A+ L  EM     E G+  + N +T+T +IDG CK+GF+D A   
Sbjct: 301 TSLIHVMCKAGNLERAVGLVREMR----ERGL--QMNEITFTALIDGFCKKGFLDDALLA 354

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+   I+P+VV Y ++I G+C     +EA+ L  EM  +GV+P+VVT++ I+   CK
Sbjct: 355 VREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCK 414

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG    A +L   M+++GV PDA TY++L+   C   R+  A  LF +M S+G +    +
Sbjct: 415 NGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVT 474

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA----FKL- 296
           Y+ LI+G+CK   +E ALSL+ EM+  G+ PDVV ++ L  GL +  + + A    FKL 
Sbjct: 475 YTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLY 534

Query: 297 ----------FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                     +D + R    A+  +    + G C  G + EA +++ ++       D   
Sbjct: 535 HEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSV 594

Query: 347 YNSLIDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           Y+ LI G C+ G +  AL   +  L CG   PN  +   +I GL   G + +A  +   +
Sbjct: 595 YSVLIHGHCREGNVMKALSFHKQMLQCG-FAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
                + +      LI   ++      V+++LH M    ++P
Sbjct: 654 LNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 230/488 (47%), Gaps = 56/488 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+AVT+ +L+   C    +  A  L   +R  G +P++ T+ ++VNG+C+      A  +
Sbjct: 190 PNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKV 249

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+EM            P+ V+Y T++ G CK G   +A  +  +M  K I P+VVT+TS+
Sbjct: 250 FDEMVKEG------LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C A +   A  L  EM ++G+Q N +TF  ++D  CK G +D+A   +  M Q  +
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P    YN L++G+C+ GR++ A+EL   ME+ G K  V +YS +++ YCKN +   A  
Sbjct: 364 QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ 423

Query: 261 LYSEMLSKGIKPDVVIHNTL-------------------------------FVGLFEIH- 288
           L  +ML  G+ PD + +++L                               +  L + H 
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHC 483

Query: 289 ---QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL---------- 335
               VERA  L DEM + GV  D  TY   I+GL K+    EA  L   L          
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI 543

Query: 336 ---RILKC--EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
               +++C    ++++  +L+ G C  G +  A ++++S+       +   YS++I G C
Sbjct: 544 KYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHC 603

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            +G + KA      M +    PN  +   LIRG        +  +++ ++     + DA 
Sbjct: 604 REGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAE 663

Query: 451 IVSIVVDL 458
               ++DL
Sbjct: 664 ASKALIDL 671



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 186/361 (51%), Gaps = 1/361 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ + Y  ++  L  +  +  A+     M    + PNV TY  ++R  C      EA  +
Sbjct: 121 PSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +M   G  PN VT+N ++   C+ G++D A RL+D+M + G++P+  T+N++++G C 
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR+  A+++F  M   G      SY+ L+ GYCK      ALS+++EM  KGI PDVV 
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
             +L   + +   +ERA  L  EM+  G+  +  T+   IDG CK G++ +A+     +R
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             + +  +  YN+LI+G C  GR++ A EL R +    + P+VVTYS ++   C +G   
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L   M EN V+P+ IT+  LIR             L   M  + + PD    + ++
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479

Query: 457 D 457
           D
Sbjct: 480 D 480



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 178/332 (53%), Gaps = 1/332 (0%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+V+ Y +V+     A     A+R F  M+  GV PNV T+N+++  LC  G   EA  +
Sbjct: 121 PSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  M   G  P+A TYNTL+  FC  G V+ A+ L   M   G K  + +++ ++NG CK
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              +E A  ++ EM+ +G+ PD V +NTL  G  ++     A  +F EM R G+  D  T
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           + + I  +CK G +  AV L   +R    + +   + +LIDG CK G L+ AL   R + 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+VV Y+ +I G C  G+MD+AR+L  +ME   V P+V+T+  ++  + +  +  
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
              +L  +M E  V+PDA   S ++ +L + +
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEK 451


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 239/476 (50%), Gaps = 42/476 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T   + K  C + R+  AA    ++   G + ++  Y  +++G CR   T VA  L
Sbjct: 162 PDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKL 221

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD-KNIKPNVVTYTS 139
              +            PN VTYT ++ G CKEG +++A++++ ++K+ + I  + V Y +
Sbjct: 222 LHSLQVKG------LSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G+C      +A R+  EM+D GVQ N+  +N +++  CK G+M E  +LL      G
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V  D ++YNTL+DG+C  G +  A E    M   G   T  +Y+ L+NG+C    I+ AL
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  ML +G+ P+ +  +TL  G F+  + E+A  L+ E    G+A +  T  T I+GL
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG--------RLEI-------AL 364
           CKN  + EA ELFH ++   C  D   Y +LIDG CK G        R+E+       ++
Sbjct: 456 CKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSV 515

Query: 365 ELFRSLPCGVLV--------------------PNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           E+F S   G+ +                    PN VTY  +I G C +G +  A  L+ +
Sbjct: 516 EMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFE 575

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           M E  + PN+    +L+  F R  +  +   +L K+ + +++ D S  ++ +  +A
Sbjct: 576 MVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVA 631



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 226/460 (49%), Gaps = 32/460 (6%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +LK    P+ ++ ++L+ G     +  +A  L+ +    G   +V T  T++NGLC+   
Sbjct: 401 MLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRR 460

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  LF  M   +      C  +++TY T+IDG CK G + +A ++ ++M++    P+
Sbjct: 461 MTEAEELFHRMKEWS------CPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPS 514

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V  + S I G   AK   +   + +EM  +G+ PN VT+  ++   CK G + +A  L  
Sbjct: 515 VEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYF 574

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHA-------------KELFVSMESMG-CKHTV 239
            M++ G++P+ F  + L+  F   G+V+ A             ++   S  ++G   H +
Sbjct: 575 EMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHII 634

Query: 240 FS------------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
            S            ++I+I G CK   +  A +L+ ++  KG  PD   +++L  G    
Sbjct: 635 ESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSAS 694

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             ++ AF L DEM    +  +  TY + I GLCK+  +  AV LF+ L+      +   Y
Sbjct: 695 GSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITY 754

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+LIDG CK G    A +L + +    + P V TY+I+I GLC  G M++A  L   M E
Sbjct: 755 NTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIE 814

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           N V PN IT+  LI+G+ R      + +L ++M    ++P
Sbjct: 815 NNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLP 854



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 228/516 (44%), Gaps = 67/516 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     V   ++ +    +   + ++I G C   R+ E   L       G   D ++Y
Sbjct: 284 GRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSY 343

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLV+G CR      A    + M   NG  G      T+TY T+++G C  G +D A +L
Sbjct: 344 NTLVDGYCRKGFMTKAFETCDMMVR-NGFTGT-----TLTYNTLLNGFCSRGAIDDALKL 397

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  + + PN ++ ++++ GF  A    +A  L+ E + +G+  NVVT N +++ LCK
Sbjct: 398 WFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCK 457

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV-- 239
           N +M EA  L   M +     D+ TY TL+DG+C  G +  A ++ + ME++G   +V  
Sbjct: 458 NRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEM 517

Query: 240 ---------------------------------FSYSILINGYCKNKEIEGALSLYSEML 266
                                             +Y  LI G+CK   +  A  LY EM+
Sbjct: 518 FNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMV 577

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERA----FKLFDEMQRNGVAADTWT----------- 311
            KG+KP++ I + L    +   +V+ A     KL D       +A T             
Sbjct: 578 EKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESL 637

Query: 312 -----------YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                      +   I GLCK G + +A  LF  L++     D   Y+SLI G   SG +
Sbjct: 638 AGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSI 697

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           ++A  L   +    L PN+VTY+ +I GLC    + +A  LF  ++   + PN IT++ L
Sbjct: 698 DLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTL 757

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           I G  +    ++  +L  KM +  + P     +I++
Sbjct: 758 IDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILI 793



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 20/313 (6%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +P+ VT+ +LI G C E  + +A  L+ ++   G +P++F  + LV+   R      A 
Sbjct: 546 LSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEAN 605

Query: 79  NLFEEMANGN------------GEFGVVCEP--------NTVTYTTIIDGLCKEGFVDKA 118
            + +++A+ +            G+   + E           + +  +I GLCK G V  A
Sbjct: 606 LVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADA 665

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           + L   +K K   P+  TY+S+I G   +   + A  L  EM+   + PN+VT+N ++  
Sbjct: 666 RNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYG 725

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK+  +  A  L + +   G+ P+A TYNTL+DG C  G    A +L   M   G + T
Sbjct: 726 LCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPT 785

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           VF+Y+ILI+G C    +E A+ L  +M+   + P+ + + TL  G      ++   KL++
Sbjct: 786 VFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYN 845

Query: 299 EMQRNGVAADTWT 311
           EM   G+    WT
Sbjct: 846 EMHICGLLPANWT 858



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 159/323 (49%), Gaps = 11/323 (3%)

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           A D   A  +F +M   G  P+  T  ++    C++G++  A+  L  M + G+  +   
Sbjct: 142 AGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVA 201

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y+ ++DG+C  G+   A++L  S++  G    V +Y++L+ GYCK   +E A  +  E+ 
Sbjct: 202 YHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIK 261

Query: 267 -SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            ++ I  D V +  L  G  +  ++E A ++ DEM   GV  + + Y T I+G CK G +
Sbjct: 262 ENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRM 321

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN-----VV 380
            E  +L           D  +YN+L+DG C+ G +  A E      C ++V N      +
Sbjct: 322 GEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFE-----TCDMMVRNGFTGTTL 376

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ G C+ G +D A  L+  M +  VVPN I+   L+ GF +  +  + + L  + 
Sbjct: 377 TYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKET 436

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
               +  +   ++ V++ L KN 
Sbjct: 437 LARGLARNVVTINTVINGLCKNR 459



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 15/202 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +   +L +  TP+ VT+ SLI GLC    +  A +LF KL+  G  P+  TY
Sbjct: 695 GSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITY 754

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+  +T  A  L ++M     + G+  +P   TYT +I GLC +G++++A +L
Sbjct: 755 NTLIDGHCKDGNTTEAFKLKQKMI----KEGI--QPTVFTYTILIHGLCTQGYMEEAIKL 808

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM + N+ PN +TY ++I+G+    +     +L+ EM   G+ P   T +V   E   
Sbjct: 809 LDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWTGHVKQAEPVV 868

Query: 182 NGKMDEASRLLDLMIQHGVRPD 203
           N K        +L + H V PD
Sbjct: 869 NSK--------NLSVGH-VEPD 881



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 99/185 (53%), Gaps = 1/185 (0%)

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S+ +L+  +    +++ AL ++ EM   G +  +   N L   L +   +  A  +F +M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G   D +T        C++G +  A +    +  +  + ++ AY++++DG C+ G+ 
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AVVPNVITFDM 419
           E+A +L  SL    L PNVVTY++++ G C +G+M++A  +  +++EN  +V + + +  
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 420 LIRGF 424
           LI G+
Sbjct: 276 LINGY 280


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 239/448 (53%), Gaps = 21/448 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++    ++  +      PD  T+ +++ GLC   +  +A AL  ++    C P+  T+
Sbjct: 194 GRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTF 250

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T +   C+      A+ L + M     ++G  C P+ V Y+T+++G  ++G VD A EL
Sbjct: 251 ATQIRAFCQNGLLDRAVQLLDRMP----QYG--CTPDVVIYSTLVNGFSEQGRVDDAIEL 304

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M     KPN + Y + ++G C A+ W +  +L +EM+ +   PN  TF+++   LC+
Sbjct: 305 LNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQ 361

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG +D A  +L+ M ++G RPDA  YNTL+  F   GRV+ A +L   + SM C   V S
Sbjct: 362 NGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL---LNSMPCSPDVIS 418

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++  + G C+ +  + A  L  +ML +      +  N L   L +  +V  A ++F++M 
Sbjct: 419 FNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMP 478

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G   D  TY + I+GL + G +  A+ELF +   + C+ DI  YN+++ GLC++ R E
Sbjct: 479 KYGCTPDIVTYSSLINGLSEQGLVESAIELFQS---MPCKPDIFGYNAVLKGLCRAARWE 535

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL  ++      PN +T++I+I  LC  G +D+A ++F  M +    P++ T++ LI
Sbjct: 536 DAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALI 595

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA 449
            GF   +E  ++ +    +  ++  PDA
Sbjct: 596 NGF---SEQGRLDDARRLLSTMSCKPDA 620



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 224/484 (46%), Gaps = 78/484 (16%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           LIK LCA+ R+ +A  +   L+  G   D  ++ TLV G CR            +     
Sbjct: 118 LIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGR-------LADAERLL 169

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
              G+    N VTYTT+I+G C+ G +  A  L+  M    + P+  TY +V+ G C A+
Sbjct: 170 AAAGLSGAANVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGAR 226

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            W +A+ L  EM+     PN VTF   +   C+NG +D A +LLD M Q+G  PD   Y+
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 209 TLLDGFCLTGRVNHAKELFVSM----------------------ESMG----------CK 236
           TL++GF   GRV+ A EL   M                      E +G          C 
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               ++S+L +  C+N  ++ A+ +  +M   G +PD VI+NTL     E  +V+ A KL
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 297 FDEMQ------------RNGVAADTW--------------------TYRTFIDGLCKNGY 324
            + M             +    A+ W                    T+   ID LC+NG 
Sbjct: 407 LNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGR 466

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A+E+F  +    C  DI  Y+SLI+GL + G +E A+ELF+S+PC    P++  Y+ 
Sbjct: 467 VNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFGYNA 523

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           ++ GLC   + + A +L  +M      PN ITF++LI    +     + IE+  +M +  
Sbjct: 524 VLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYG 583

Query: 445 VMPD 448
             PD
Sbjct: 584 STPD 587



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 215/440 (48%), Gaps = 18/440 (4%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
            ++  ++++   P+ VTF + I+  C    +  A  L  ++  +GC PDV  Y+TLVNG 
Sbjct: 233 ALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGF 292

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
                   A+ L           G++C+PNT+ Y   + GLC     +   +L+++M  K
Sbjct: 293 SEQGRVDDAIELLN---------GMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRK 343

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           +  PN  T++ +    C     + A  +  +M   G +P+ V +N ++    + G++D+A
Sbjct: 344 DCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDA 403

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            +LL+ M      PD  ++N  L G C   R + A+EL V M    C     +++ILI+ 
Sbjct: 404 LKLLNSM---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDS 460

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C+N  +  A+ ++ +M   G  PD+V +++L  GL E   VE A +LF  M       D
Sbjct: 461 LCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CKPD 517

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            + Y   + GLC+     +A EL   +    C  +   +N LI+ LC+ G ++ A+E+F 
Sbjct: 518 IFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFE 577

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +P     P++ TY+ +I G    G++D AR L   M   +  P+ ++++  ++G  R  
Sbjct: 578 QMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAE 634

Query: 429 EPSKVIELLHKMKEINVMPD 448
              +  E++ +M  +   P+
Sbjct: 635 RWKEAEEVVAEMLRMKCPPN 654



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 201/381 (52%), Gaps = 18/381 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +L     P+ + + + +KGLC   R  +   L  ++    C P+  T+
Sbjct: 296 GRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L + LC+      A+ + E+M     ++G  C P+ V Y T+I    ++G VD A +L
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMH----KYG--CRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      P+V+++ + ++G C A+ W++A+ L ++M+ +      +TFN+++D LC+
Sbjct: 407 LNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQ 463

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG+++ A  + + M ++G  PD  TY++L++G    G V  A ELF   +SM CK  +F 
Sbjct: 464 NGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELF---QSMPCKPDIFG 520

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++ G C+    E A  L S M  K   P+ +  N L   L +   V+RA ++F++M 
Sbjct: 521 YNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMP 580

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G   D +TY   I+G  + G + +A  L  T+    C+ D  +YNS + GLC++ R +
Sbjct: 581 KYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWK 637

Query: 362 IALELFRSLPCGVLVPNVVTY 382
            A E+   +      PN VT+
Sbjct: 638 EAEEVVAEMLRMKCPPNEVTF 658



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 180/365 (49%), Gaps = 10/365 (2%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           + V++ T++ G C++G +  A E LL     +   NVVTYT++I G+C +    +A  L 
Sbjct: 145 DPVSHNTLVAGYCRDGRLADA-ERLLAAAGLSGAANVVTYTTLINGYCRSGRLADALALI 203

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M    V P+  T+N ++  LC   + ++A  L+  M+++   P+  T+ T +  FC  
Sbjct: 204 ASM---PVAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQN 260

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G ++ A +L   M   GC   V  YS L+NG+ +   ++ A+ L + ML    KP+ + +
Sbjct: 261 GLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGML---CKPNTICY 317

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N    GL    + E   +L  EM R     +  T+      LC+NG +  A+E+   +  
Sbjct: 318 NAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHK 377

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
             C  D   YN+LI    + GR++ AL+L  S+PC    P+V++++  + GLC   + D 
Sbjct: 378 YGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCS---PDVISFNAALKGLCRAERWDD 434

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A +L + M         +TF++LI    +    +  IE+  +M +    PD    S +++
Sbjct: 435 AEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLIN 494

Query: 458 LLAKN 462
            L++ 
Sbjct: 495 GLSEQ 499



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 41/214 (19%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV++   V  ++ K   TPD VT++SLI GL  +  +  A  LF  +    C+PD+F Y
Sbjct: 465 GRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGY 521

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ GLCR +    A  L   MA  +      C PN +T+  +I+ LC++G VD+A E+
Sbjct: 522 NAVLKGLCRAARWEDAGELISNMARKD------CPPNEITFNILINSLCQKGLVDRAIEV 575

Query: 122 LLQMKD--------------------------------KNIKPNVVTYTSVIRGFCYAKD 149
             QM                                   + KP+ V+Y S ++G C A+ 
Sbjct: 576 FEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCKPDAVSYNSALKGLCRAER 635

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           W EA+ +  EM+     PN VTF         NG
Sbjct: 636 WKEAEEVVAEMLRMKCPPNEVTFKYANRLFVPNG 669



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 5/184 (2%)

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV  N L   L    ++  A ++ D ++  G AAD  ++ T + G C++G + +A E   
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAG-AADPVSHNTLVAGYCRDGRLADA-ERLL 169

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
               L    ++  Y +LI+G C+SGRL  AL L  S+P   + P+  TY+ ++ GLC   
Sbjct: 170 AAAGLSGAANVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGAR 226

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           Q + A  L  +M  N   PN +TF   IR F +     + ++LL +M +    PD  I S
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 454 IVVD 457
            +V+
Sbjct: 287 TLVN 290


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 244/479 (50%), Gaps = 19/479 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL   L+  FTP+ V + +LI G C    + +A  +   +   G  P+  T  +++ G C
Sbjct: 405 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 464

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  + EEM +    F +    N   +TTII  LC     + A   L +M  +N
Sbjct: 465 KIGQMEQAECILEEMLSRG--FSI----NPGAFTTIIHWLCMNSRFESALRFLREMLLRN 518

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           ++PN    T+++ G C     ++A  L+  ++++G   N+VT N ++  LCK G M EA 
Sbjct: 519 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           RLL  M++ G   D  TYNTL+ G C  G+V    +L   M   G +   F+Y++LI+G 
Sbjct: 579 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 638

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+  +++ A++L++E  S+ + P+V  +  +  G  +  ++E   KLF E+    +  ++
Sbjct: 639 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 698

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y T I   C+NG  VEA +L   +R          Y+SLI G+C  GR+E A  L   
Sbjct: 699 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 758

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    L+PNVV Y+ +IGG C  GQMDK  ++  +M    + PN IT+ ++I G+ +  +
Sbjct: 759 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 818

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVD------------LLAKNEISLNSLPSFTVHE 476
                +LLH+M    ++PD    +++ +            LLA++ +  NS P F +HE
Sbjct: 819 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVGFNS-PLFLIHE 876



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 239/512 (46%), Gaps = 64/512 (12%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           ++   +PD   F++ I   C   ++ +A  LF  +   G  P+V TY  L++GLC+  + 
Sbjct: 305 MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 364

Query: 75  IVALNLFEEMA---------------NG-------NGEFGVVCE-------PNTVTYTTI 105
             A    E+M                NG       N    V+ E       PN V Y T+
Sbjct: 365 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 424

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           IDG CK G +  A  +   M  K I PN VT  S+I+GFC      +A+ +  EM+ +G 
Sbjct: 425 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 484

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
             N   F  I+  LC N + + A R L  M+   +RP+     TL+ G C  G+ + A E
Sbjct: 485 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 544

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L+  +   G    + + + LI+G CK   ++ A+ L  +ML +G   D + +NTL  G  
Sbjct: 545 LWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCC 604

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +  +VE  FKL  EM + G+  DT+TY   I G+C+ G + EAV L++  +      ++ 
Sbjct: 605 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 664

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVL------------------------------ 375
            Y  +IDG CK+ ++E   +LF  L    L                              
Sbjct: 665 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 724

Query: 376 -----VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                 P   TYS +I G+CN G+M+ A+ L  +M +  ++PNV+ +  LI G+ ++ + 
Sbjct: 725 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 784

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            KV+ +L +M   ++ P+    ++++D  +K+
Sbjct: 785 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKS 816



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 237/456 (51%), Gaps = 10/456 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T T L+  L   + + ++  +F  +R  G  PDV+ ++T +N  C+      A+ L
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 335

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M     + GV   PN VTY  +I GLCK G +D+A     +M    +   ++TY+ +
Sbjct: 336 FFDME----KLGV--SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVL 389

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G    + +NEA  +  E +++G  PN V +N ++D  CK G + +A R+   M+  G+
Sbjct: 390 INGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 449

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P++ T N+++ GFC  G++  A+ +   M S G      +++ +I+  C N   E AL 
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 509

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
              EML + ++P+  +  TL  GL +  +   A +L+  +   G  A+  T    I GLC
Sbjct: 510 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 569

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + EAV L   +       D   YN+LI G CK G++E   +L   +    + P+  
Sbjct: 570 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 629

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+++I G+C  G++D+A +L+ + +   +VPNV T+ ++I G+ + ++  +  +L  ++
Sbjct: 630 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 689

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
              N+  ++ + + ++    +N    N++ +F +H+
Sbjct: 690 LTQNLELNSVVYNTLIRAYCRNG---NTVEAFKLHD 722



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 164/327 (50%), Gaps = 6/327 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S    +  R+L+  F  + VT  +LI GLC    + EA  L  K+   G   D  TY
Sbjct: 537 GKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITY 596

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+         L  EM           EP+T TY  +I G+C+ G +D+A  L
Sbjct: 597 NTLISGCCKEGKVEEGFKLRGEMVKQG------IEPDTFTYNLLIHGMCRIGKLDEAVNL 650

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + K +++ PNV TY  +I G+C A    E ++LF E++ Q ++ N V +N ++   C+
Sbjct: 651 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 710

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG   EA +L D M   G+ P   TY++L+ G C  GR+  AK L   M   G    V  
Sbjct: 711 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 770

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI GYCK  +++  +++  EM S  I P+ + +  +  G  +   ++ A KL  EM 
Sbjct: 771 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 830

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEA 328
             G+  DT TY    +G CK G I E 
Sbjct: 831 GKGIVPDTVTYNVLTNGFCKEGKIEEG 857



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 160/298 (53%), Gaps = 7/298 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L ++L+  F  D +T+ +LI G C E ++ E   L  ++   G EPD FTY
Sbjct: 572 GNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTY 631

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G+CR      A+NL+ E  + +        PN  TY  +IDG CK   +++ ++L
Sbjct: 632 NLLIHGMCRIGKLDEAVNLWNECKSRD------LVPNVYTYGVMIDGYCKADKIEEGEKL 685

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++  +N++ N V Y ++IR +C   +  EA +L  +M  +G+ P   T++ ++  +C 
Sbjct: 686 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 745

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+M++A  L+D M + G+ P+   Y  L+ G+C  G+++    +   M S        +
Sbjct: 746 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT 805

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           Y+++I+GY K+ +++ A  L  EM+ KGI PD V +N L  G  +  ++E   KL  E
Sbjct: 806 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG-KLLAE 862



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 36/322 (11%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F  + ++GV P V T   ++  L K  +++++  + + M Q GV PD + ++T ++ FC
Sbjct: 266 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFC 324

Query: 216 LTGRVNHAKELFVSMESMG---------------CKH--------------------TVF 240
             G+V  A +LF  ME +G               CKH                    T+ 
Sbjct: 325 KGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLI 384

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS+LING  K ++   A S+  E L KG  P+ V++NTL  G  ++  +  A ++  +M
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 444

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  ++ T  + I G CK G + +A  +   +       +  A+ ++I  LC + R 
Sbjct: 445 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 504

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E AL   R +    + PN    + ++GGLC +G+   A +L+  + E     N++T + L
Sbjct: 505 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL 564

Query: 421 IRGFIRINEPSKVIELLHKMKE 442
           I G  +     + + LL KM E
Sbjct: 565 IHGLCKTGNMQEAVRLLKKMLE 586


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/402 (33%), Positives = 217/402 (53%), Gaps = 6/402 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +F  +IKG C    I ++  L  +LR FG  P+V  YTTL++G C+      A +LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM    G+FG+V   N  TYT +I GL K G   +  E+  +M++  + PN+ TY  V+
Sbjct: 222 FEM----GKFGLV--ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C      +A ++F EM ++GV  N+VT+N ++  LC+  K +EA++++D M  + + 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TYNTL+DGFC  G++  A  L   ++S G   ++ +Y++L++G+C+  +  GA  +
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM  +GIKP  V +  L         +E A +L   M+  G+  D  TY   I G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA  LF ++     E +   YN++I G CK G    AL LFR +    L PNV +
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           YS +I  LC + ++ +A DL   M ++ + P+    +++ R 
Sbjct: 516 YSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 228/439 (51%), Gaps = 11/439 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALF--TKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           F P +  F +L+  +   S   +    F  +K++V     DV+++  ++ G C       
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVV---LDVYSFGIVIKGCCEAGEIEK 181

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           + +L  E+     EFG    PN V YTT+IDG CK+G ++KAK+L  +M    +  N  T
Sbjct: 182 SFDLLVELR----EFGF--SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWT 235

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           YT +I G        +   ++ +M + GV PN+ T+N +M++LCK+G+  +A ++ D M 
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMR 295

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + GV  +  TYNTL+ G C   + N A ++   M+S      + +Y+ LI+G+C   ++ 
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLG 355

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            ALSL  ++ S+G+ P +V +N L  G         A K+  EM+  G+     TY   I
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D   ++  +  A++L  ++  L    D+  Y+ LI G C  G++  A  LF+S+   +L 
Sbjct: 416 DTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLE 475

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN V Y+ MI G C +G   +A  LF DMEE  + PNV ++  LIR   +  +  +  +L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDL 535

Query: 437 LHKMKEINVMPDASIVSIV 455
           + KM +  + P  +I +++
Sbjct: 536 VEKMIDSGIDPSDTICNLI 554



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 191/369 (51%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  + +  F+P+ V +T+LI G C +  I +A  LF ++  FG   + +TY
Sbjct: 177 GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTY 236

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GL +         ++E+M     E GV   PN  TY  +++ LCK+G    A ++
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQ----EHGVF--PNLYTYNCVMNQLCKDGRTKDAFKV 290

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+++ +  N+VTY ++I G C     NEA ++  +M    + PN++T+N ++D  C 
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCS 350

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ +A  L   +   G+ P   TYN L+ GFC  G  + A ++   ME  G K +  +
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+ + ++  +E A+ L S M   G+ PDV  ++ L  G     Q+  A +LF  M 
Sbjct: 411 YTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +  +   Y T I G CK G    A+ LF  +   +   ++ +Y+ LI  LCK  +L+
Sbjct: 471 EKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLK 530

Query: 362 IALELFRSL 370
            A +L   +
Sbjct: 531 EAEDLVEKM 539



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 183/355 (51%), Gaps = 1/355 (0%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  II+   +   +D +     +M DK   P    + +++     +  +N+    F E  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            + V  +V +F +++   C+ G+++++  LL  + + G  P+   Y TL+DG C  G + 
Sbjct: 157 IK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            AK+LF  M   G     ++Y++LI+G  KN   +    +Y +M   G+ P++  +N + 
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L +  + + AFK+FDEM+  GV+ +  TY T I GLC+     EA ++   ++     
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  YN+LIDG C  G+L  AL L R L    L P++VTY++++ G C  G    A  +
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
             +MEE  + P+ +T+ +LI  F R +     I+L   M+E+ ++PD    S+++
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLI 450



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 175/364 (48%), Gaps = 35/364 (9%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +V ++  VI+G C A +  ++  L +E+ + G  PNVV +  ++D  CK G++++A  L 
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M + G+  + +TY  L+ G    G      E++  M+  G    +++Y+ ++N  CK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
              + A  ++ EM  +G+  ++V +NTL  GL    +   A K+ D+M+   +  +  TY
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG-------------- 358
            T IDG C  G + +A+ L   L+       +  YN L+ G C+ G              
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401

Query: 359 ---------------------RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                                 +E A++L  S+    LVP+V TYS++I G C  GQM++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  LF  M E  + PN + ++ +I G+ +     + + L   M+E  + P+ +  S ++ 
Sbjct: 462 ASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIR 521

Query: 458 LLAK 461
           +L K
Sbjct: 522 VLCK 525



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 36/221 (16%)

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y ++IN Y +++ ++ ++  ++EM+ KG  P     N L   +       + +  F+E +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
                                               +K   D+ ++  +I G C++G +E
Sbjct: 157 ------------------------------------IKVVLDVYSFGIVIKGCCEAGEIE 180

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            + +L   L      PNVV Y+ +I G C  G+++KA+DLF +M +  +V N  T+ +LI
Sbjct: 181 KSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLI 240

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            G  +     +  E+  KM+E  V P+    + V++ L K+
Sbjct: 241 HGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 3/106 (2%)

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           +V +V ++ I+I G C  G+++K+ DL +++ E    PNV+ +  LI G  +  E  K  
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           +L  +M +  ++ +    ++++  L KN I       F ++E+ +E
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ---GFEMYEKMQE 261


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/448 (32%), Positives = 230/448 (51%), Gaps = 6/448 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L ++     +P+ VT+  L+ GL     + +A  L   +   G E  V+TY
Sbjct: 216 GMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTY 275

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G C       A  L EEM +     G V  P  VTY TI+ GLCK G V  A++L
Sbjct: 276 DPLIRGYCEKGQIEEASRLGEEMLSR----GAV--PTVVTYNTIMYGLCKWGRVSDARKL 329

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +KN+ P++V+Y ++I G+    +  EA  LF E+  + + P+VVT+N ++D LC+
Sbjct: 330 LDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCR 389

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A RL D MI+HG  PD FT+ T + GFC  G +  AKELF  M + G +   F+
Sbjct: 390 LGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFA 449

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y   I G  K  +   A  +  EML++G  PD++ +N    GL ++  ++ A +L  +M 
Sbjct: 450 YITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 509

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG+  D  TY + I      G++ +A  LF  +        +  Y  LI      GRL+
Sbjct: 510 YNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLK 569

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A+  F  +    + PNV+TY+ +I GLC   +MD+A + F +M+   + PN  T+ +LI
Sbjct: 570 LAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILI 629

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA 449
                +    + + L   M +  + PD+
Sbjct: 630 NENCNLGHWQEALRLYKDMLDREIQPDS 657



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 214/440 (48%), Gaps = 41/440 (9%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  P V TY T+++  C+      AL L  +M        + C PN VTY  +++GL   
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQ------AMGCSPNDVTYNVLVNGLSHS 250

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G +++AKEL+  M    ++ +V TY  +IRG+C      EA RL  EM+ +G  P VVT+
Sbjct: 251 GEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTY 310

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPD-------------------AF-------- 205
           N IM  LCK G++ +A +LLD+M+   + PD                   AF        
Sbjct: 311 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRY 370

Query: 206 --------TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
                   TYNTL+DG C  G ++ A  L   M   G    VF+++  + G+CK   +  
Sbjct: 371 RSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPM 430

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L+ EML++G++PD   + T  VG  ++    +AF + +EM   G   D  TY  FID
Sbjct: 431 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 490

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GL K G + EA EL   +       D   Y S+I     +G L  A  LF  +    + P
Sbjct: 491 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFP 550

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +VVTY+++I      G++  A   F +M E  V PNVIT++ LI G  ++ +  +     
Sbjct: 551 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFF 610

Query: 438 HKMKEINVMPDASIVSIVVD 457
            +M+   + P+    +I+++
Sbjct: 611 AEMQAKGISPNKYTYTILIN 630



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 232/477 (48%), Gaps = 41/477 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P       L+  +  +  ++E   L F K+   G  PDV     ++  L    + I   +
Sbjct: 128 PSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNI---D 184

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  E+ N   E G+   P  VTY T++D  CK+G V +A +LL QM+     PN VTY  
Sbjct: 185 VAREVYNVMVECGIC--PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNV 242

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G  ++ +  +AK L  +M+  G++ +V T++ ++   C+ G+++EASRL + M+  G
Sbjct: 243 LVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRG 302

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P   TYNT++ G C  GRV+ A++L   M +      + SY+ LI GY +   I  A 
Sbjct: 303 AVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 362

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L++E+  + + P VV +NTL  GL  +  ++ A +L DEM ++G   D +T+ TF+ G 
Sbjct: 363 LLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGF 422

Query: 320 CKNGYIVEAVELFHTL---------------------------------RILKCEF--DI 344
           CK G +  A ELF  +                                  +L   F  D+
Sbjct: 423 CKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDL 482

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN  IDGL K G L+ A EL + +    LVP+ VTY+ +I      G + KAR LFL+
Sbjct: 483 ITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLE 542

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           M    + P+V+T+ +LI  +         I    +M E  V P+    + +++ L K
Sbjct: 543 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCK 599



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 199/372 (53%), Gaps = 6/372 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRVS    +L  ++     PD V++ +LI G      I EA  LF +LR     P V TY
Sbjct: 321 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTY 380

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++GLCR     VA+ L +EM     +      P+  T+TT + G CK G +  AKEL
Sbjct: 381 NTLIDGLCRLGDLDVAMRLKDEMIKHGPD------PDVFTFTTFVRGFCKMGNLPMAKEL 434

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M ++ ++P+   Y + I G     D ++A  +  EM+ +G  P+++T+NV +D L K
Sbjct: 435 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 494

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + EAS L+  M+ +G+ PD  TY +++    + G +  A+ LF+ M S G   +V +
Sbjct: 495 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVT 554

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++LI+ Y     ++ A+  + EM  KG+ P+V+ +N L  GL ++ ++++A+  F EMQ
Sbjct: 555 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQ 614

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G++ + +TY   I+  C  G+  EA+ L+  +   + + D   + SL+  L K  +L 
Sbjct: 615 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLH 674

Query: 362 IALELFRSLPCG 373
           +   L   +  G
Sbjct: 675 VVRHLENVIAAG 686



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 184/382 (48%), Gaps = 8/382 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+ +++ GLC   R+ +A  L   +      PD+ +Y TL+ G  R  +   A  L
Sbjct: 305 PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 364

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F E+   +        P+ VTY T+IDGLC+ G +D A  L  +M      P+V T+T+ 
Sbjct: 365 FAELRYRS------LAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTF 418

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF-NVIMDELCKNGKMDEASRLLDLMIQHG 199
           +RGFC   +   AK LF EM+++G+QP+   +   I+ EL K G   +A  + + M+  G
Sbjct: 419 VRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL-KLGDPSKAFGMQEEMLARG 477

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD  TYN  +DG    G +  A EL   M   G      +Y+ +I+ +     +  A 
Sbjct: 478 FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKAR 537

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +L+ EMLSKGI P VV +  L        +++ A   F EM   GV  +  TY   I+GL
Sbjct: 538 ALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 597

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   + +A   F  ++      +   Y  LI+  C  G  + AL L++ +    + P+ 
Sbjct: 598 CKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 657

Query: 380 VTYSIMIGGLCNDGQMDKARDL 401
            T+  ++  L  D ++   R L
Sbjct: 658 CTHRSLLKHLNKDYKLHVVRHL 679



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 160/323 (49%), Gaps = 32/323 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F++   +      P  VT+ +LI GLC    +  A  L  ++   G +PDVFT
Sbjct: 355 LGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFT 414

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGN-------------GE---------FGVVCE-- 96
           +TT V G C+  +  +A  LF+EM N               GE         FG+  E  
Sbjct: 415 FTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML 474

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+ +TY   IDGL K G + +A EL+ +M    + P+ VTYTS+I     A    
Sbjct: 475 ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLR 534

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A+ LF+EM+ +G+ P+VVT+ V++      G++  A      M + GV P+  TYN L+
Sbjct: 535 KARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALI 594

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           +G C   +++ A   F  M++ G     ++Y+ILIN  C     + AL LY +ML + I+
Sbjct: 595 NGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQ 654

Query: 272 PDVVIHNTLFVGL---FEIHQVE 291
           PD   H +L   L   +++H V 
Sbjct: 655 PDSCTHRSLLKHLNKDYKLHVVR 677



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 153/338 (45%), Gaps = 55/338 (16%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEA------------------------------SRLLD 193
           G + + ++++VI+D L +NG M  A                                +LD
Sbjct: 76  GFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILD 135

Query: 194 L--------------------MIQHGVRPDAFTYNTLLDGFCLTGRVNH---AKELFVSM 230
           L                    M+  G+ PD    N +L    L  R N+   A+E++  M
Sbjct: 136 LLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLR--LLRDRDNNIDVAREVYNVM 193

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G   TV +Y+ +++ +CK   ++ AL L  +M + G  P+ V +N L  GL    ++
Sbjct: 194 VECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEM 253

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E+A +L  +M R G+    +TY   I G C+ G I EA  L   +        +  YN++
Sbjct: 254 EQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTI 313

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           + GLCK GR+  A +L   +    L+P++V+Y+ +I G    G + +A  LF ++   ++
Sbjct: 314 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL 373

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            P+V+T++ LI G  R+ +    + L  +M +    PD
Sbjct: 374 APSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPD 411


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 237/462 (51%), Gaps = 21/462 (4%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   +L+S  +P+  T+  LI+G C    +  A   F ++   GC P+V TY TL++G C
Sbjct: 192 VFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYC 251

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +         L   MA          EPN ++Y  +I+GLC+EG + +   +L +M  + 
Sbjct: 252 KLRKIDDGFELLRSMALKG------LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRG 305

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
              + VTY ++I+G+C   ++++A  +  EM+  G+ P+V+T+  ++  +CK G M+ A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRAT 365

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             LD M   G+ P+  TY TL+DGF   G +N A  +   M   G   +V +Y+ LING+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGH 425

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C   ++  A+++  +M  KG+ PDVV ++T+  G    + V+ A ++  +M   G+  DT
Sbjct: 426 CIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDT 485

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + I G C+     EA +LF  +  +    D   Y +LI+  C  G L+ A++L   
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNE 545

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM---------- 419
           +    ++P+VVTYS++I GL    +  +A+ L L +     VP+ +T+            
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605

Query: 420 -----LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
                LI+GF      ++  ++   M E N  PD +  ++++
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMI 647



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 246/490 (50%), Gaps = 36/490 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + ++  GF +L  +      P+ +++  +I GLC E R+ E + + T++   G   D  T
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+ G C+  +   AL +  EM            P+ +TYT++I  +CK G +++A E
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHG------LSPSVITYTSLIHSMCKAGNMNRATE 366

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L QM+ + + PN  TYT+++ GF      NEA R+  EM+D G  P+VVT+N +++  C
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC 426

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GKM +A  +L+ M + G+ PD  +Y+T+L GFC +  V+ A  +   M + G K    
Sbjct: 427 IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS LI G+C+ +  + A  L+ EML  G+ PD   +  L         +++A +L +EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVEL---------------FHTLRILKCE-FDI 344
              GV  D  TY   I+GL K     EA  L               +HTL I  C   + 
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL-IENCSNIEF 605

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           ++  SLI G C  G +  A ++F S+      P+   Y++MI G C  G + KA  L+ +
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKE 665

Query: 405 MEENAVVPNVITFDMLIRGFI---RINEPSKVIELLHKMKEINVMPDASIV--------- 452
           M ++  + + +T   L++      ++NE + VI  + +  E++    A ++         
Sbjct: 666 MVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGN 725

Query: 453 -SIVVDLLAK 461
             +V+D+LA+
Sbjct: 726 MDVVLDVLAE 735



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 211/414 (50%), Gaps = 7/414 (1%)

Query: 50  RVFGCEPDVFTYTTLVNGLCRTSHTI-VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG 108
           +  G  P V +Y  +++   R+   I  A N+F+EM            PN  TY  +I G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQ------VSPNVFTYNILIRG 214

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            C  G +D A     +M+ K   PNVVTY ++I G+C  +  ++   L   M  +G++PN
Sbjct: 215 FCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPN 274

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           ++++NV+++ LC+ G+M E S +L  M + G   D  TYNTL+ G+C  G  + A  +  
Sbjct: 275 LISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   G   +V +Y+ LI+  CK   +  A     +M  +G+ P+   + TL  G  +  
Sbjct: 335 EMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            +  A+++  EM  NG +    TY   I+G C  G +V+A+ +   ++      D+ +Y+
Sbjct: 395 YMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYS 454

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +++ G C+S  ++ AL + R +    + P+ +TYS +I G C   +  +A DLF +M   
Sbjct: 455 TVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRV 514

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + P+  T+  LI  +    +  K I+L ++M E  V+PD    S++++ L K 
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 224/462 (48%), Gaps = 56/462 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL  + K  ++ D VT+ +LIKG C E    +A  +  ++   G  P V TY
Sbjct: 289 GRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITY 348

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++ +C+  +   A    ++M         +C PN  TYTT++DG  ++G++++A  +
Sbjct: 349 TSLIHSMCKAGNMNRATEFLDQM-----RVRGLC-PNERTYTTLVDGFSQKGYMNEAYRV 402

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D    P+VVTY ++I G C A    +A  +  +M ++G+ P+VV+++ ++   C+
Sbjct: 403 LKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCR 462

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +  +DEA R+   M+  G++PD  TY++L+ GFC   R   A +LF  M  +G     F+
Sbjct: 463 SYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFT 522

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LIN YC   +++ A+ L++EM+ KG+ PDVV ++ L  GL +  +   A +L  ++ 
Sbjct: 523 YTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLF 582

Query: 302 RNGVAADTWTYRTFID---------------GLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                    TY T I+               G C  G + EA ++F ++     + D  A
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTA 642

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ------------ 394
           YN +I G C+ G +  A  L++ +     + + VT   ++  L  +G+            
Sbjct: 643 YNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVL 702

Query: 395 -----------------------MDKARDLFLDMEENAVVPN 413
                                  MD   D+  +M ++  +PN
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 184/364 (50%), Gaps = 1/364 (0%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK-DWNE 152
           +C   +  +  ++    +   +DKA  ++   +     P V++Y +V+     +K + + 
Sbjct: 129 LCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISF 188

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+ +F EM+   V PNV T+N+++   C  G +D A R  D M + G  P+  TYNTL+D
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C   +++   EL  SM   G +  + SY+++ING C+   ++    + +EM  +G   
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D V +NTL  G  +     +A  +  EM R+G++    TY + I  +CK G +  A E  
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +R+     + R Y +L+DG  + G +  A  + + +      P+VVTY+ +I G C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G+M  A  +  DM+E  + P+V+++  ++ GF R  +  + + +  KM    + PD    
Sbjct: 429 GKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITY 488

Query: 453 SIVV 456
           S ++
Sbjct: 489 SSLI 492


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 141/450 (31%), Positives = 227/450 (50%), Gaps = 7/450 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  +++++  +P  VT   LI G C   R+ +A     K    G EPD  TY
Sbjct: 244 GSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTY 303

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T V+ LC+  H   AL + + M     +      P+  TY T+I+ L K G +D+AK +
Sbjct: 304 NTFVHCLCQNGHVSHALKVMDLMLQEGHD------PDVFTYNTVINCLSKNGELDEAKGI 357

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + QM D+   P+  T+ ++I   C      EA  L  E+  +G+ P+V TFN++++ LCK
Sbjct: 358 VNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCK 417

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G      RL + M   G  PD  TYN L+D  C  G++ +A +L   MES GC  +  +
Sbjct: 418 VGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVT 477

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+  CK   IE A  ++ +M + GI    V  NTL  GL +  +++ A +L ++M 
Sbjct: 478 YNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 537

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+     TY + +   CK G + +A ++  T+     E D+  Y +LI+GLCK+GR +
Sbjct: 538 KEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQ 597

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL+L R +    + P    Y+ +I  L     +  A  LF +M E    P+ +T+ ++ 
Sbjct: 598 VALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVF 657

Query: 422 RGFIRINEPSK-VIELLHKMKEINVMPDAS 450
           RG  R   P K   + L +M     MP+ S
Sbjct: 658 RGLCRGGGPIKEAFDFLVEMVNKGFMPEFS 687



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 216/428 (50%), Gaps = 7/428 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGRV      + + +   F PD VT+ + +  LC    +  A  +   +   G +PDVFT
Sbjct: 278 MGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFT 337

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++N L +      A  +  +M +        C P+T T+ T+I  LC +  +++A +
Sbjct: 338 YNTVINCLSKNGELDEAKGIVNQMVDRG------CLPDTTTFNTLIVALCSQNRLEEALD 391

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++  K + P+V T+  +I   C   D +   RLF EM   G  P+ VT+N+++D LC
Sbjct: 392 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLC 451

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GK+  A  LL  M  +G      TYNT++D  C   R+  A+E+F  M++ G   +  
Sbjct: 452 SMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAV 511

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LI+G CK K I+ A  L  +M+ +G++P  + +N++     +   +++A  + + M
Sbjct: 512 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETM 571

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG   D  TY T I+GLCK G    A++L   +RI       +AYN +I  L +   L
Sbjct: 572 TANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 631

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCN-DGQMDKARDLFLDMEENAVVPNVITFDM 419
             AL LFR +      P+ +TY I+  GLC   G + +A D  ++M     +P   +F M
Sbjct: 632 RDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRM 691

Query: 420 LIRGFIRI 427
           L  G + +
Sbjct: 692 LAEGLLNL 699



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 221/454 (48%), Gaps = 8/454 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V    ++L  +      PD  TFT+L++G   E  I  A  + TK+   GC P   T  
Sbjct: 210 QVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVN 269

Query: 63  TLVNGLCRTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            L+NG C+      AL   + E+A+G        EP+ VTY T +  LC+ G V  A ++
Sbjct: 270 VLINGYCKMGRVEDALGYIQKEIADG-------FEPDQVTYNTFVHCLCQNGHVSHALKV 322

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M  +   P+V TY +VI       + +EAK +  +M+D+G  P+  TFN ++  LC 
Sbjct: 323 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCS 382

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA  L   +   G+ PD +T+N L++  C  G  +    LF  M+S GC     +
Sbjct: 383 QNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVT 442

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+  C   ++  AL L  EM S G     V +NT+   L +  ++E A ++FD+M 
Sbjct: 443 YNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMD 502

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G++    T+ T IDGLCK   I +A EL   +     +     YNS++   CK G L+
Sbjct: 503 AHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLK 562

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ++  ++       +VVTY  +I GLC  G+   A  L   M    + P    ++ +I
Sbjct: 563 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVI 622

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           +   R N     + L  +M E+   PDA    IV
Sbjct: 623 QSLFRRNNLRDALSLFREMTEVGEPPDALTYKIV 656



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 219/452 (48%), Gaps = 6/452 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT  +LIK LC   ++  A  +  ++      PD  T+TTL+ G         AL +
Sbjct: 193 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRV 252

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M     E G  C P  VT   +I+G CK G V+ A   + +      +P+ VTY + 
Sbjct: 253 KTKMM----ETG--CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTF 306

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C     + A ++   M+ +G  P+V T+N +++ L KNG++DEA  +++ M+  G 
Sbjct: 307 VHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 366

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T+NTL+   C   R+  A +L   +   G    V++++ILIN  CK  +    + 
Sbjct: 367 LPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 426

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM S G  PD V +N L   L  + ++  A  L  EM+ NG    T TY T ID LC
Sbjct: 427 LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC 486

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   I EA E+F  +           +N+LIDGLCK+ R++ A EL   +    L P+ +
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI 546

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++   C  G + KA D+   M  N    +V+T+  LI G  +       ++LL  M
Sbjct: 547 TYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 606

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           +   + P     + V+  L +     ++L  F
Sbjct: 607 RIKGIRPTPKAYNPVIQSLFRRNNLRDALSLF 638



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 220/436 (50%), Gaps = 10/436 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D   +  L+  L   SR+    +++ ++   G +PDV T  TL+  LCR      A+ + 
Sbjct: 159 DTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLML 218

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM++          P+  T+TT++ G  +EG ++ A  +  +M +    P  VT   +I
Sbjct: 219 EEMSSH------AVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLI 272

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C      +A     + +  G +P+ VT+N  +  LC+NG +  A +++DLM+Q G  
Sbjct: 273 NGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD 332

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD FTYNT+++     G ++ AK +   M   GC     +++ LI   C    +E AL L
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDL 392

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             E+  KG+ PDV   N L   L ++       +LF+EM+ +G A D  TY   ID LC 
Sbjct: 393 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCS 452

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G +V A++L   +    C      YN++ID LCK  R+E A E+F  +    +  + VT
Sbjct: 453 MGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVT 512

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           ++ +I GLC   ++D A +L   M +  + P+ IT++ ++  + +  +  K  ++L  M 
Sbjct: 513 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMT 572

Query: 442 ----EINVMPDASIVS 453
               EI+V+   ++++
Sbjct: 573 ANGFEIDVVTYGTLIN 588



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 173/340 (50%), Gaps = 2/340 (0%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           Q+    ++ +   Y  ++            + ++ EM D+G+QP+VVT N ++  LC+  
Sbjct: 150 QLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAH 209

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++  A  +L+ M  H V PD  T+ TL+ GF   G +  A  +   M   GC  T  + +
Sbjct: 210 QVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVN 269

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +LINGYCK   +E AL    + ++ G +PD V +NT    L +   V  A K+ D M + 
Sbjct: 270 VLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQE 329

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D +TY T I+ L KNG + EA  + + +    C  D   +N+LI  LC   RLE A
Sbjct: 330 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA 389

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L+L R L    L P+V T++I+I  LC  G       LF +M+ +   P+ +T+++LI  
Sbjct: 390 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIV-SIVVDLLAKN 462
              + +    ++LL +M E N  P +++  + ++D L K 
Sbjct: 450 LCSMGKLVNALDLLKEM-ESNGCPRSTVTYNTIIDALCKQ 488



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 179/374 (47%), Gaps = 1/374 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+   Y  II  L   G  D  + L+ +M+ +  +       S +  +   + +++A  L
Sbjct: 87  PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDL 146

Query: 157 FIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
               ++  GVQ +   +N +++ L +  +M     + + M   G++PD  T NTL+   C
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
              +V  A  +   M S        +++ L+ G+ +   IE AL + ++M+  G  P  V
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             N L  G  ++ +VE A     +   +G   D  TY TF+  LC+NG++  A+++   +
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                + D+  YN++I+ L K+G L+ A  +   +     +P+  T++ +I  LC+  ++
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL 386

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           ++A DL  ++    + P+V TF++LI    ++ +P   I L  +MK     PD    +I+
Sbjct: 387 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNIL 446

Query: 456 VDLLAKNEISLNSL 469
           +D L      +N+L
Sbjct: 447 IDHLCSMGKLVNAL 460


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 226/435 (51%), Gaps = 29/435 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR---------- 70
           P+ + + +LI G C +  +  A  LF +L++ G  P V TY  ++NG C+          
Sbjct: 237 PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRL 296

Query: 71  -----TSHTIVALNLFEEMANGNGEFGVV--------------CEPNTVTYTTIIDGLCK 111
                +    V + ++  + +   + G +              C+P+ VTY T+I G C+
Sbjct: 297 LMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCR 356

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
           +G V +A +LL Q   K + PN  +YT +I  +C    ++ A    IEM ++G +P++VT
Sbjct: 357 DGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVT 416

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  ++  L   G++D A  + + M++ GV PDA  YN L+ G C   ++  AK L   M 
Sbjct: 417 YGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEML 476

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
                   F Y+ L++G+ +N  ++ A  L+   + KG+ P +V +N +  G  +   ++
Sbjct: 477 DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMK 536

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A    + M++  +A D +TY T IDG  K   +  A ++F  +  +KC+ ++  Y SLI
Sbjct: 537 DAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLI 596

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           +G C+ G L  +L++FR +    LVPNVVTYSI+IG  C + ++  A   F +M  N  V
Sbjct: 597 NGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCV 656

Query: 412 PNVITFDMLIRGFIR 426
           PN +TF+ L+ GF +
Sbjct: 657 PNDVTFNYLVNGFSK 671



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 232/493 (47%), Gaps = 46/493 (9%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD--VFTYTT--LVNGLCRTSHT 74
           + PD +   SL+  L    RI  A  L+ ++       D  V  Y+T  +V GLC+    
Sbjct: 161 YFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKL 220

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
                L E+       +G  C PN + Y T+IDG CK+G ++ A  L +++K K   P V
Sbjct: 221 EEGRKLIED------RWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTV 274

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
            TY ++I GFC   D+    RL +EM  +G+  NV  +N I+D   K+G + +A   ++ 
Sbjct: 275 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEG 334

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN-- 252
           MI+ G +PD  TYNTL+ G C  G+V+ A +L       G     FSY+ LI+ YCK   
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 394

Query: 253 ---------------------------------KEIEGALSLYSEMLSKGIKPDVVIHNT 279
                                             E++ AL++  +ML +G+ PD  I+N 
Sbjct: 395 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 454

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  GL +  ++  A  L  EM    V  D + Y T +DG  +NG + EA +LF       
Sbjct: 455 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 514

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
               I  YN++I G CK G ++ A+     +    L P+  TYS +I G      +D A+
Sbjct: 515 MNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQ 574

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +F +M +    PNV+T+  LI GF R  +  + +++  +M+   ++P+    SI++   
Sbjct: 575 KMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSF 634

Query: 460 AKNEISLNSLPSF 472
            K E  L    SF
Sbjct: 635 CK-EAKLIDAASF 646



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 217/445 (48%), Gaps = 20/445 (4%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            T +   + ++I        I++A      +   GC+PD+ TY TL++G CR      A 
Sbjct: 305 LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEAD 364

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L E+ A G G       PN  +YT +I   CK+G  D+A   L++M ++  KP++VTY 
Sbjct: 365 QLLEQ-ALGKGLM-----PNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYG 418

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +++ G   A + + A  +  +M+++GV P+   +N++M  LCK  K+  A  LL  M+  
Sbjct: 419 ALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ 478

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            V PDAF Y TL+DGF   G ++ A++LF      G    +  Y+ +I GYCK   ++ A
Sbjct: 479 SVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDA 538

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           ++  + M  + + PD   ++T+  G  + H ++ A K+F EM +     +  TY + I+G
Sbjct: 539 MACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLING 598

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+ G +  ++++F  ++      ++  Y+ LI   CK  +L  A   F  +     VPN
Sbjct: 599 FCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPN 658

Query: 379 VVTYSIMIGGLCNDGQ----------MDKARDLFLD----MEENAVVPNVITFDMLIRGF 424
            VT++ ++ G   +G            +  + +FL+    M  +   P    ++ ++   
Sbjct: 659 DVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICL 718

Query: 425 IRINEPSKVIELLHKMKEINVMPDA 449
            +       ++L +KM     +PD+
Sbjct: 719 CQYGMFRTALQLSNKMTSKGCIPDS 743



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 201/442 (45%), Gaps = 27/442 (6%)

Query: 2   GRVSHGFVVL------GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
            R  HG +V       G I   C  PD VT+ +LI G C + ++ EA  L  +    G  
Sbjct: 318 ARYKHGHIVKAVETIEGMIECGC-KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLM 376

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+ F+YT L++  C+      A N   EM     +      P+ VTY  ++ GL   G V
Sbjct: 377 PNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHK------PDLVTYGALVHGLVVAGEV 430

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A  +  +M ++ + P+   Y  ++ G C       AK L  EM+DQ V P+   +  +
Sbjct: 431 DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 490

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D   +NG +DEA +L +L I+ G+ P    YN ++ G+C  G +  A      M+    
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
               F+YS +I+GY K  +++GA  ++ EM+    KP+VV + +L  G      + R+ K
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +F EMQ  G+  +  TY   I   CK   +++A   F  + + KC  +   +N L++G  
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS 670

Query: 356 KSGRLEIA--------------LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           K+G   I+              L  F  +      P    Y+ ++  LC  G    A  L
Sbjct: 671 KNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQL 730

Query: 402 FLDMEENAVVPNVITFDMLIRG 423
              M     +P+ ++F  L+ G
Sbjct: 731 SNKMTSKGCIPDSVSFVALLHG 752



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 214/414 (51%), Gaps = 20/414 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+VS    +L + L     P+  ++T LI   C +     A+    ++   G +PD+ TY
Sbjct: 358 GKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTY 417

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+GL       VAL + E+M     E GV   P+   Y  ++ GLCK+  +  AK L
Sbjct: 418 GALVHGLVVAGEVDVALTIREKML----ERGVF--PDAGIYNILMSGLCKKFKLPAAKLL 471

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D+++ P+   Y +++ GF    + +EA++LF   +++G+ P +V +N ++   CK
Sbjct: 472 LAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCK 531

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G M +A   ++ M +  + PD FTY+T++DG+     ++ A+++F  M  M CK  V +
Sbjct: 532 FGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVT 591

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LING+C+  ++  +L ++ EM + G+ P+VV ++ L     +  ++  A   F+EM 
Sbjct: 592 YTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEML 651

Query: 302 RNGVAADTWTYRTFIDGLCKNG--YIVEAVELFHT----------LRILKCEFDIR--AY 347
            N    +  T+   ++G  KNG   I E    F             R++   +  R  AY
Sbjct: 652 MNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAY 711

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           NS++  LC+ G    AL+L   +     +P+ V++  ++ G+C +G+  + +++
Sbjct: 712 NSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNI 765



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 5/369 (1%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N   Y++++  L +     + + +L  M+ + + P     + VI+ +  +    +A  L+
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 158 IEMMDQGVQ-PNVVTFNVIMDELCKNGKMDEASRLLDLMIQ---HGVR-PDAFTYNTLLD 212
             ++      P+V+  N +++ L K G+++ A +L D M++    G R  D ++   ++ 
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C  G++   ++L       GC   +  Y+ LI+GYCK  ++E A  L+ E+  KG  P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
            V  +  +  G  +    +   +L  EM   G+  +   Y T ID   K+G+IV+AVE  
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +    C+ DI  YN+LI G C+ G++  A +L        L+PN  +Y+ +I   C  
Sbjct: 333 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQ 392

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G  D+A +  ++M E    P+++T+  L+ G +   E    + +  KM E  V PDA I 
Sbjct: 393 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY 452

Query: 453 SIVVDLLAK 461
           +I++  L K
Sbjct: 453 NILMSGLCK 461


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 216/392 (55%), Gaps = 6/392 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL R+    F PD VT+  +I   C+  ++  A  +F +L    CEP V TYT L+    
Sbjct: 160 VLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATI 219

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                 VA+ L +EM +         EP+T+TY  II G+CKE  VDKA ELL  +  + 
Sbjct: 220 LDGGIDVAMKLLDEMLSKG------LEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            KP+++TY  ++R       W+E ++L  EM+  G +PNVVT ++++  LC++GK++EA 
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M + G++PDA+ Y+ L+ GFC  GR++ A E    M S GC   + +Y+ ++ G 
Sbjct: 334 NLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+  + + AL ++ ++   G  P+V  +NTLF  L+      RA ++  ++   G+  D 
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + I  LC++G + EA+EL   ++  +   ++ +YN ++ GLCK  R   A+E+  +
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAA 513

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           +      PN  TY ++I G+   G   +A +L
Sbjct: 514 MTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 239/456 (52%), Gaps = 7/456 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +     L  ++   +TPD +  T LIKG      I +A  +   L  +G +PDVF Y
Sbjct: 83  GKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAY 141

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G  + +    A  + + M +     G +  P+ VTY  +I   C  G +D A E+
Sbjct: 142 NALISGFIKANQLENANRVLDRMKSR----GFL--PDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++   N +P V+TYT +I         + A +L  EM+ +G++P+ +T+N I+  +CK
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              +D+A  LL  +   G +PD  TYN LL      G+ +  ++L   M S+GCK  V +
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +SILI   C++ ++E A++L   M  KG+KPD   ++ L  G     +++ A +  + M 
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   D   Y T + GLC+ G   +A+E+F  L  + C  ++ +YN+L   L  SG   
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRY 435

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALE+   L    + P+ +TY+ +I  LC DG +D+A +L +DM+     PNV+++++++
Sbjct: 436 RALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIIL 495

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            G  ++N  +  IE+L  M E    P+ +   ++++
Sbjct: 496 LGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIE 531



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 224/437 (51%), Gaps = 6/437 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           IL+    PD   + +LI G    +++  A  +  +++  G  PDV TY  ++   C    
Sbjct: 129 ILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGK 188

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
             +AL +FEE+   N      CEP  +TYT +I+    +G +D A +LL +M  K ++P+
Sbjct: 189 LDLALEIFEELLKDN------CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPD 242

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            +TY ++IRG C     ++A  L   +  +G +P+++T+N+++  L   GK  E  +L+ 
Sbjct: 243 TLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLIS 302

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            MI  G +P+  T++ L+   C  G+V  A  L  SM+  G K   + Y  LI G+C+  
Sbjct: 303 EMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG 362

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++ A      M+S G  PD+V +NT+  GL    + ++A ++F+++   G   +  +Y 
Sbjct: 363 RLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYN 422

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T    L  +G    A+E+   L     + D   YNSLI  LC+ G ++ A+EL   +  G
Sbjct: 423 TLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSG 482

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              PNVV+Y+I++ GLC   + + A ++   M E    PN  T+ +LI G       ++ 
Sbjct: 483 RYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEA 542

Query: 434 IELLHKMKEINVMPDAS 450
           +EL + +  +N + + S
Sbjct: 543 MELANSLHGMNAISEDS 559



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 193/399 (48%), Gaps = 7/399 (1%)

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+N  CR      +L   E M +          P+ +  T +I G      + KA  ++ 
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKG------YTPDVILCTKLIKGFFNSRNIGKATRVM- 127

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           ++ ++  KP+V  Y ++I GF  A     A R+   M  +G  P+VVT+N+++   C  G
Sbjct: 128 EILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG 187

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+D A  + + +++    P   TY  L++   L G ++ A +L   M S G +    +Y+
Sbjct: 188 KLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYN 247

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +I G CK   ++ A  L   + S+G KPD++ +N L   L    +     KL  EM   
Sbjct: 248 AIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI 307

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  T+   I  LC++G + EAV L  +++    + D   Y+ LI G C+ GRL++A
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            E    +     +P++V Y+ ++ GLC  G+ D+A ++F  ++E    PNV +++ L   
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                +  + +E++ K+    + PD    + ++  L ++
Sbjct: 428 LWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRD 466


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 239/454 (52%), Gaps = 10/454 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P++VT++ LI GLC   R+ EA  L  ++   GC+P   TYT L+   C    T  A+ +
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EMA         C PN  TYT +ID LC+EG +++A  +  +M    + P ++T+ ++
Sbjct: 300 LDEMATK------ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 353

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G+C  + W  +    + +M++G  +PN+ T+N +M+ LC+  K  +A  LL  ++ +G
Sbjct: 354 INGYC-KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD  TYN L+DGFC  G++N A  +F SM S G +   F+++ LI+G CK   +E A 
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 472

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +   M+ KGI  D V    L  G  +I + +    LF+ M  N       T+  F+D L
Sbjct: 473 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 532

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K+  + EA  +   +        +  +  LI+G C++G   ++L++   +      PNV
Sbjct: 533 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 592

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+I+I GLCN+G++++A  +   M    V PN  T+ +L++  ++     +  +++  
Sbjct: 593 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 652

Query: 440 MKEINVMPDASIVSIVVD--LLAKNEISLNSLPS 471
           M +    P++ I S ++   +L+   I   +L S
Sbjct: 653 MVKNGCQPNSHIYSALLSGFVLSNTAIGARALSS 686



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 245/480 (51%), Gaps = 13/480 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG V+  F+V  R++   F    + + +++  LC    +  A     K+   G   D   
Sbjct: 151 MGFVA--FLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHV 208

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T+LV   CR      A  +FE+M+         C PN+VTY+ +I GLC+ G +++A +
Sbjct: 209 CTSLVLANCRRDDLGEAFRVFEKMSKEEN-----CRPNSVTYSILIHGLCEAGRLEEAFQ 263

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M +K  +P+  TYT +I+  C     ++A ++  EM  +   PNV T+ +++D LC
Sbjct: 264 LKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLC 323

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + GK++EA+ +   M++HG+ P   T+N L++G+C  G V  A +L   ME   CK  + 
Sbjct: 324 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 383

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+ G C+  +   A  L   ++  G+ PD V +N L  G  +  Q+  AF +F+ M
Sbjct: 384 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 443

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D +T+   IDGLCK G + +A  +  ++       D   + +LIDG CK G+ 
Sbjct: 444 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 503

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +    LF ++     +    T++  +  L  D ++++A  +   M +  +VP+V+T  +L
Sbjct: 504 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 563

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN------EISLNSLPSFTV 474
           I G  R  E +  +++L +MK+    P+    +I+++ L  N      E  L S+ SF V
Sbjct: 564 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 623



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 210/427 (49%), Gaps = 6/427 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+   F +   +++    P   T+T LIK  C      +A  +  ++    C P+V TY
Sbjct: 256 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 315

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++ LCR      A  +F +M         +C P  +T+  +I+G CKEG+V  A +L
Sbjct: 316 TILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGIITFNALINGYCKEGWVVSAFQL 369

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+  N KPN+ TY  ++ G C      +A  L   ++D G+ P+ VT+N+++D  CK
Sbjct: 370 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 429

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++ A  + + M   G+ PD FT+  L+DG C  GR+  A  +  SM   G      +
Sbjct: 430 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 489

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+G+CK  + +    L+  M+           N     L + +++  A  +  +M 
Sbjct: 490 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 549

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+     T+   I+G C+ G    ++++   ++   C  ++  Y  +I+GLC +GR+E
Sbjct: 550 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 609

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +  S+    + PN  TY++++      G++D+A  +   M +N   PN   +  L+
Sbjct: 610 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 669

Query: 422 RGFIRIN 428
            GF+  N
Sbjct: 670 SGFVLSN 676



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 221/477 (46%), Gaps = 45/477 (9%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K+C  P+  T+T LI  LC E +I EA  +F K+   G  P + T+  L+NG C+    +
Sbjct: 306 KAC-VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVV 364

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  L   M  GN      C+PN  TY  +++GLC+     KA  LL ++ D  + P+ V
Sbjct: 365 SAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 418

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY  ++ GFC     N A  +F  M   G++P+  TF  ++D LCK G++++A+ +L  M
Sbjct: 419 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 478

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           ++ G+  D  T+  L+DG C  G+      LF +M    C  T  +++  ++   K+ ++
Sbjct: 479 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 538

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A ++  +M+  G+ P VV H  L  G     +   + K+ + M++ G + + +TY   
Sbjct: 539 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTII 598

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I+GLC NG + EA  +  ++       +   Y  L+    K+GRL+ A ++  ++     
Sbjct: 599 INGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGC 658

Query: 376 VPNVVTYSIMIGG------------LCNDGQMDKARDLFLDMEENAV------------- 410
            PN   YS ++ G            L + G +D AR L  +  +N               
Sbjct: 659 QPNSHIYSALLSGFVLSNTAIGARALSSTGDLD-ARSLSSEENDNNCLSSHVFRLMDVDH 717

Query: 411 ------------VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
                       VP    ++ L+ G  +     +  +L   M +  + PD +I SI+
Sbjct: 718 ALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII 774



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 245/522 (46%), Gaps = 92/522 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F +L  + K    P+  T+  L++GLC  S+  +A  L  ++   G  PD  TY
Sbjct: 361 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 420

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+G C+     +A N+F  M N  G      EP+  T+T +IDGLCK G +++A  +
Sbjct: 421 NILVDGFCKEGQLNMAFNIFNSM-NSAG-----LEPDGFTFTALIDGLCKLGRLEQANGI 474

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFC---------------------------------YAK 148
           L  M  K I  + VT+T++I G C                                   K
Sbjct: 475 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 534

Query: 149 DW--NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           D+  NEA  +  +MM  G+ P+VVT  ++++  C+ G+   + ++L+ M Q G  P+ +T
Sbjct: 535 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 594

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  +++G C  GRV  A+ +  SM S G     F+Y++L+  + K   ++ A  + S M+
Sbjct: 595 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 654

Query: 267 SKGIKPDVVIHNTLFVG-------------------------------------LFEIHQ 289
             G +P+  I++ L  G                                     +F +  
Sbjct: 655 KNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMD 714

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V+ A K+ DE+++ GV  +   Y   + GLCK G I+EA +L   + +    F  +A +S
Sbjct: 715 VDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLTQDM-VKHGLFPDKAISS 772

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM---- 405
           +I+  CK+ + +  LE  + +     VP+  +Y  +I GL N+G++ +A+ L  D+    
Sbjct: 773 IIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHT 832

Query: 406 ---EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
              EE  V P++   + L++     ++P K ++L+  +++++
Sbjct: 833 GIEEEVEVTPSI---EFLMKE--EEDDPDKCLKLIKAIEQVH 869



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 76/264 (28%)

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
           GAL   +E+   G +     ++TL + L +++    AF ++  M   G       YRT +
Sbjct: 122 GALDGMTEL---GFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVV 178

Query: 317 DGLCKNGYIVEAVELF------------------------------HTLRILK------- 339
           + LCKNG+ V+A E+F                                 R+ +       
Sbjct: 179 NALCKNGF-VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEEN 237

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSL------------------PCGV------- 374
           C  +   Y+ LI GLC++GRLE A +L + +                   C +       
Sbjct: 238 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 297

Query: 375 ----------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
                      VPNV TY+I+I  LC +G++++A  +F  M ++ + P +ITF+ LI G+
Sbjct: 298 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 357

Query: 425 IRINEPSKVIELLHKMKEINVMPD 448
            +        +LL  M++ N  P+
Sbjct: 358 CKEGWVVSAFQLLSVMEKGNCKPN 381


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 239/454 (52%), Gaps = 10/454 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P++VT++ LI GLC   R+ EA  L  ++   GC+P   TYT L+   C    T  A+ +
Sbjct: 263 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 322

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EMA         C PN  TYT +ID LC+EG +++A  +  +M    + P ++T+ ++
Sbjct: 323 LDEMATK------ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 376

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G+C  + W  +    + +M++G  +PN+ T+N +M+ LC+  K  +A  LL  ++ +G
Sbjct: 377 INGYC-KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD  TYN L+DGFC  G++N A  +F SM S G +   F+++ LI+G CK   +E A 
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 495

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +   M+ KGI  D V    L  G  +I + +    LF+ M  N       T+  F+D L
Sbjct: 496 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 555

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K+  + EA  +   +        +  +  LI+G C++G   ++L++   +      PNV
Sbjct: 556 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 615

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+I+I GLCN+G++++A  +   M    V PN  T+ +L++  ++     +  +++  
Sbjct: 616 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 675

Query: 440 MKEINVMPDASIVSIVVD--LLAKNEISLNSLPS 471
           M +    P++ I S ++   +L+   I   +L S
Sbjct: 676 MVKNGCQPNSHIYSALLSGFVLSNTAIGARALSS 709



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 245/480 (51%), Gaps = 13/480 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG V+  F+V  R++   F    + + +++  LC    +  A     K+   G   D   
Sbjct: 174 MGFVA--FLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHV 231

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T+LV   CR      A  +FE+M+         C PN+VTY+ +I GLC+ G +++A +
Sbjct: 232 CTSLVLANCRRDDLGEAFRVFEKMSKEEN-----CRPNSVTYSILIHGLCEAGRLEEAFQ 286

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M +K  +P+  TYT +I+  C     ++A ++  EM  +   PNV T+ +++D LC
Sbjct: 287 LKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLC 346

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + GK++EA+ +   M++HG+ P   T+N L++G+C  G V  A +L   ME   CK  + 
Sbjct: 347 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 406

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+ G C+  +   A  L   ++  G+ PD V +N L  G  +  Q+  AF +F+ M
Sbjct: 407 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 466

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D +T+   IDGLCK G + +A  +  ++       D   + +LIDG CK G+ 
Sbjct: 467 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 526

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +    LF ++     +    T++  +  L  D ++++A  +   M +  +VP+V+T  +L
Sbjct: 527 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 586

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN------EISLNSLPSFTV 474
           I G  R  E +  +++L +MK+    P+    +I+++ L  N      E  L S+ SF V
Sbjct: 587 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 646



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 210/427 (49%), Gaps = 6/427 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+   F +   +++    P   T+T LIK  C      +A  +  ++    C P+V TY
Sbjct: 279 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 338

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++ LCR      A  +F +M         +C P  +T+  +I+G CKEG+V  A +L
Sbjct: 339 TILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGIITFNALINGYCKEGWVVSAFQL 392

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+  N KPN+ TY  ++ G C      +A  L   ++D G+ P+ VT+N+++D  CK
Sbjct: 393 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 452

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++ A  + + M   G+ PD FT+  L+DG C  GR+  A  +  SM   G      +
Sbjct: 453 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 512

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+G+CK  + +    L+  M+           N     L + +++  A  +  +M 
Sbjct: 513 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 572

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+     T+   I+G C+ G    ++++   ++   C  ++  Y  +I+GLC +GR+E
Sbjct: 573 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 632

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +  S+    + PN  TY++++      G++D+A  +   M +N   PN   +  L+
Sbjct: 633 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 692

Query: 422 RGFIRIN 428
            GF+  N
Sbjct: 693 SGFVLSN 699



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 222/461 (48%), Gaps = 29/461 (6%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K+C  P+  T+T LI  LC E +I EA  +F K+   G  P + T+  L+NG C+    +
Sbjct: 329 KAC-VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVV 387

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  L   M  GN      C+PN  TY  +++GLC+     KA  LL ++ D  + P+ V
Sbjct: 388 SAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 441

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY  ++ GFC     N A  +F  M   G++P+  TF  ++D LCK G++++A+ +L  M
Sbjct: 442 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 501

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           ++ G+  D  T+  L+DG C  G+      LF +M    C  T  +++  ++   K+ ++
Sbjct: 502 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 561

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A ++  +M+  G+ P VV H  L  G     +   + K+ + M++ G + + +TY   
Sbjct: 562 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTII 621

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I+GLC NG + EA  +  ++       +   Y  L+    K+GRL+ A ++  ++     
Sbjct: 622 INGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGC 681

Query: 376 VPNVVTYSIMIGG------------LCNDGQMDKARDLFLDMEENAVVPNVIT------- 416
            PN   YS ++ G            L + G +D AR L  +  +N  + N I        
Sbjct: 682 QPNSHIYSALLSGFVLSNTAIGARALSSTGDLD-ARSLSSEENDNNCLSNEIKKCGVPTE 740

Query: 417 --FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
             ++ L+ G  +     +  +L   M +  + PD +I SI+
Sbjct: 741 DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII 781



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 221/474 (46%), Gaps = 34/474 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F +L  + K    P+  T+  L++GLC  S+  +A  L  ++   G  PD  TY
Sbjct: 384 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 443

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+G C+     +A N+F  M N  G      EP+  T+T +IDGLCK G +++A  +
Sbjct: 444 NILVDGFCKEGQLNMAFNIFNSM-NSAG-----LEPDGFTFTALIDGLCKLGRLEQANGI 497

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  K I  + VT+T++I G C      +   LF  M++        TFN  +D L K
Sbjct: 498 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 557

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + K++EA+ +L  M+++G+ P   T+  L++G C  G    + ++   M+  GC   V++
Sbjct: 558 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 617

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+ING C N  +E A ++   M S G+ P+   +  L     +  +++RAF++   M 
Sbjct: 618 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 677

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-------------------RILKCEF 342
           +NG   ++  Y   + G   +   + A  L  T                     I KC  
Sbjct: 678 KNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGV 737

Query: 343 DIR-AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
                YN L+ GLCK GR+  A +L + +    L P+    SI I   C   + D   + 
Sbjct: 738 PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKYDNCLEF 796

Query: 402 FLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIELLHKM----KEINVMPD 448
              + +N  VP+  ++  +I G     R+ E  K++  L +     +E+ V P 
Sbjct: 797 MKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPS 850



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 76/264 (28%)

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
           GAL   +E+   G +     ++TL + L +++    AF ++  M   G       YRT +
Sbjct: 145 GALDGMTEL---GFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVV 201

Query: 317 DGLCKNGYIVEAVELF------------------------------HTLRILK------- 339
           + LCKNG+ V+A E+F                                 R+ +       
Sbjct: 202 NALCKNGF-VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEEN 260

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSL------------------PCGV------- 374
           C  +   Y+ LI GLC++GRLE A +L + +                   C +       
Sbjct: 261 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 320

Query: 375 ----------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
                      VPNV TY+I+I  LC +G++++A  +F  M ++ + P +ITF+ LI G+
Sbjct: 321 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 380

Query: 425 IRINEPSKVIELLHKMKEINVMPD 448
            +        +LL  M++ N  P+
Sbjct: 381 CKEGWVVSAFQLLSVMEKGNCKPN 404


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 242/459 (52%), Gaps = 11/459 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           +SC  P++VT++ LI GLC   R+ EA  L  ++   GC+P   TYT L+   C    T 
Sbjct: 193 ESC-RPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 251

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A+ + +EMA         C PN  TYT +ID LC+EG +++A  +  +M    + P ++
Sbjct: 252 KAMKMLDEMATK------ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGII 305

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           T+ ++I G+C  + W  +    + +M++G  +PN+ T+N +M+ LC+  K  +A  LL  
Sbjct: 306 TFNALINGYC-KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 364

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           ++ +G+ PD  TYN L+DGFC  G++N A  +F SM S G +   F+++ LI+G CK   
Sbjct: 365 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 424

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +E A  +   M+ KGI  D V    L  G  +I + +    LF+ M  N       T+  
Sbjct: 425 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNC 484

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
           F+D L K+  + EA  +   +        +  +  LI+G C++G   ++L++   +    
Sbjct: 485 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 544

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             PNV TY+I+I GLCN+G++++A  +   M    V PN  T+ +L++  ++     +  
Sbjct: 545 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 604

Query: 435 ELLHKMKEINVMPDASIVSIVVD--LLAKNEISLNSLPS 471
           +++  M +    P++ I S ++   +L+   I   +L S
Sbjct: 605 QIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSS 643



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 245/480 (51%), Gaps = 13/480 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG V+  F+V  R++   F    + + +++  LC    +  A     K+   G   D   
Sbjct: 108 MGFVA--FLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHV 165

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T+LV   CR      A  +FE+M+         C PN+VTY+ +I GLC+ G +++A +
Sbjct: 166 CTSLVLANCRRDDLGEAFRVFEKMSKEES-----CRPNSVTYSILIHGLCEAGRLEEAFQ 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M +K  +P+  TYT +I+  C     ++A ++  EM  +   PNV T+ +++D LC
Sbjct: 221 LKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + GK++EA+ +   M++HG+ P   T+N L++G+C  G V  A +L   ME   CK  + 
Sbjct: 281 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 340

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+ G C+  +   A  L   ++  G+ PD V +N L  G  +  Q+  AF +F+ M
Sbjct: 341 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 400

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D +T+   IDGLCK G + +A  +  ++       D   + +LIDG CK G+ 
Sbjct: 401 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 460

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +    LF ++     +    T++  +  L  D ++++A  +   M +  +VP+V+T  +L
Sbjct: 461 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 520

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN------EISLNSLPSFTV 474
           I G  R  E +  +++L +MK+    P+    +I+++ L  N      E  L S+ SF V
Sbjct: 521 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 580



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 210/427 (49%), Gaps = 6/427 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+   F +   +++    P   T+T LIK  C      +A  +  ++    C P+V TY
Sbjct: 213 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 272

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++ LCR      A  +F +M         +C P  +T+  +I+G CKEG+V  A +L
Sbjct: 273 TILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGIITFNALINGYCKEGWVVSAFQL 326

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+  N KPN+ TY  ++ G C      +A  L   ++D G+ P+ VT+N+++D  CK
Sbjct: 327 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 386

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++ A  + + M   G+ PD FT+  L+DG C  GR+  A  +  SM   G      +
Sbjct: 387 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 446

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+G+CK  + +    L+  M+           N     L + +++  A  +  +M 
Sbjct: 447 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 506

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+     T+   I+G C+ G    ++++   ++   C  ++  Y  +I+GLC +GR+E
Sbjct: 507 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 566

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +  S+    + PN  TY++++      G++D+A  +   M +N   PN   +  L+
Sbjct: 567 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 626

Query: 422 RGFIRIN 428
            GF+  N
Sbjct: 627 SGFVLSN 633



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 221/477 (46%), Gaps = 45/477 (9%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K+C  P+  T+T LI  LC E +I EA  +F K+   G  P + T+  L+NG C+    +
Sbjct: 263 KAC-VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVV 321

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  L   M  GN      C+PN  TY  +++GLC+     KA  LL ++ D  + P+ V
Sbjct: 322 SAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 375

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY  ++ GFC     N A  +F  M   G++P+  TF  ++D LCK G++++A+ +L  M
Sbjct: 376 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 435

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           ++ G+  D  T+  L+DG C  G+      LF +M    C  T  +++  ++   K+ ++
Sbjct: 436 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 495

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A ++  +M+  G+ P VV H  L  G     +   + K+ + M++ G + + +TY   
Sbjct: 496 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTII 555

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I+GLC NG + EA  +  ++       +   Y  L+    K+GRL+ A ++  ++     
Sbjct: 556 INGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGC 615

Query: 376 VPNVVTYSIMIGG------------LCNDGQMDKARDLFLDMEENAV------------- 410
            PN   YS ++ G            L + G +D AR L  +  +N               
Sbjct: 616 QPNSHIYSALLSGFVLSNTAIGARALSSTGDLD-ARSLSSEENDNNCLSSHVFRLMDVDH 674

Query: 411 ------------VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
                       VP    ++ L+ G  +     +  +L   M +  + PD +I SI+
Sbjct: 675 ALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII 731



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 245/522 (46%), Gaps = 92/522 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F +L  + K    P+  T+  L++GLC  S+  +A  L  ++   G  PD  TY
Sbjct: 318 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 377

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+G C+     +A N+F  M N  G      EP+  T+T +IDGLCK G +++A  +
Sbjct: 378 NILVDGFCKEGQLNMAFNIFNSM-NSAG-----LEPDGFTFTALIDGLCKLGRLEQANGI 431

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFC---------------------------------YAK 148
           L  M  K I  + VT+T++I G C                                   K
Sbjct: 432 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 491

Query: 149 DW--NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           D+  NEA  +  +MM  G+ P+VVT  ++++  C+ G+   + ++L+ M Q G  P+ +T
Sbjct: 492 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 551

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  +++G C  GRV  A+ +  SM S G     F+Y++L+  + K   ++ A  + S M+
Sbjct: 552 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 611

Query: 267 SKGIKPDVVIHNTLFVG-------------------------------------LFEIHQ 289
             G +P+  I++ L  G                                     +F +  
Sbjct: 612 KNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMD 671

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V+ A K+ DE+++ GV  +   Y   + GLCK G I+EA +L   + +    F  +A +S
Sbjct: 672 VDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLTQDM-VKHGLFPDKAISS 729

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM---- 405
           +I+  CK+ + +  LE  + +     VP+  +Y  +I GL N+G++ +A+ L  D+    
Sbjct: 730 IIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHT 789

Query: 406 ---EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
              EE  V P++   + L++     ++P K ++L+  +++++
Sbjct: 790 GIEEEVEVTPSI---EFLMKE--EEDDPDKCLKLIKAIEQVH 826



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 76/264 (28%)

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
           GAL   +E+   G +     ++TL + L +++    AF ++  M   G       YRT +
Sbjct: 79  GALDGMTEL---GFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVV 135

Query: 317 DGLCKNGYIVEAVELF------------------------------HTLRILK------- 339
           + LCKNG+ V+A E+F                                 R+ +       
Sbjct: 136 NALCKNGF-VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEES 194

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSL------------------PCGV------- 374
           C  +   Y+ LI GLC++GRLE A +L + +                   C +       
Sbjct: 195 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 254

Query: 375 ----------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
                      VPNV TY+I+I  LC +G++++A  +F  M ++ + P +ITF+ LI G+
Sbjct: 255 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 314

Query: 425 IRINEPSKVIELLHKMKEINVMPD 448
            +        +LL  M++ N  P+
Sbjct: 315 CKEGWVVSAFQLLSVMEKGNCKPN 338


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 235/447 (52%), Gaps = 8/447 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T+  +I  +C E  +  A  LF +++  G  PD  TY ++++G  +       +  
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FEEM +      + CEP+ +TY  +I+  CK G +    E   +MK   +KPNVV+Y+++
Sbjct: 320 FEEMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  FC      +A + +++M   G+ PN  T+  ++D  CK G + +A RL + M+Q GV
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             +  TY  L+DG C   R+  A+ELF  M++ G    + SY+ LI+G+ K K ++ AL 
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L +E+  +GIKPD++++ T   GL  + ++E A  + +EM+  G+ A++  Y T +D   
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV-LVPNV 379
           K+G   E + L   ++ L  E  +  +  LIDGLCK+  +  A++ F  +     L  N 
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             ++ MI GLC D Q++ A  LF  M +  +VP+   +  L+ G  +     + + L  K
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673

Query: 440 MKEINVMPD-ASIVSIVVDLLAKNEIS 465
           M EI +  D  +  S+V  L   N++ 
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQ 700



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/432 (31%), Positives = 218/432 (50%), Gaps = 13/432 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ S+I G     R+ +    F +++   CEPDV TY  L+N  C+     + L  
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + EM  GNG      +PN V+Y+T++D  CKEG + +A +  + M+   + PN  TYTS+
Sbjct: 355 YREM-KGNG-----LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C   + ++A RL  EM+  GV+ NVVT+  ++D LC   +M EA  L   M   GV
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  +YN L+ GF     ++ A EL   ++  G K  +  Y   I G C  ++IE A  
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + +EM   GIK + +I+ TL    F+         L DEM+   +     T+   IDGLC
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRA----YNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           KN  + +AV+ F+ +     +F ++A    + ++IDGLCK  ++E A  LF  +    LV
Sbjct: 589 KNKLVSKAVDYFNRI---SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 645

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+   Y+ ++ G    G + +A  L   M E  +  +++ +  L+ G    N+  K    
Sbjct: 646 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 705

Query: 437 LHKMKEINVMPD 448
           L +M    + PD
Sbjct: 706 LEEMIGEGIHPD 717



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 206/389 (52%), Gaps = 3/389 (0%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           VC P    +  +   L   G +++A +   +MK   + P   +   ++  F      ++ 
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           KR F +M+  G +P V T+N+++D +CK G ++ A  L + M   G+ PD  TYN+++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           F   GR++     F  M+ M C+  V +Y+ LIN +CK  ++   L  Y EM   G+KP+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV ++TL     +   +++A K + +M+R G+  + +TY + ID  CK G + +A  L +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +  +  E+++  Y +LIDGLC + R++ A ELF  +    ++PN+ +Y+ +I G     
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            MD+A +L  +++   + P+++ +   I G   + +      ++++MKE  +  ++ I +
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546

Query: 454 IVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
            ++D   K   S N      + ++ +E+D
Sbjct: 547 TLMDAYFK---SGNPTEGLHLLDEMKELD 572



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 221/457 (48%), Gaps = 10/457 (2%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F VL      C  P    F +L   L     + EA   F+K++ F   P   +   L++ 
Sbjct: 178 FDVLWSTRNVC-VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
             +   T      F++M       G    P   TY  +ID +CKEG V+ A+ L  +MK 
Sbjct: 237 FAKLGKTDDVKRFFKDM------IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + + P+ VTY S+I GF      ++    F EM D   +P+V+T+N +++  CK GK+  
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
                  M  +G++P+  +Y+TL+D FC  G +  A + +V M  +G     ++Y+ LI+
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
             CK   +  A  L +EML  G++ +VV +  L  GL +  +++ A +LF +M   GV  
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  +Y   I G  K   +  A+EL + L+    + D+  Y + I GLC   ++E A  + 
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530

Query: 368 RSLP-CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
             +  CG+   N + Y+ ++      G   +   L  +M+E  +   V+TF +LI G  +
Sbjct: 531 NEMKECGIKA-NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589

Query: 427 INEPSKVIELLHKMK-EINVMPDASIVSIVVDLLAKN 462
               SK ++  +++  +  +  +A+I + ++D L K+
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 200/416 (48%), Gaps = 7/416 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+         +   C  PD +T+ +LI   C   ++      + +++  G +P+V +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TLV+  C+      A+  + +M       G+V  PN  TYT++ID  CK G +  A  
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMR----RVGLV--PNEYTYTSLIDANCKIGNLSDAFR 423

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M    ++ NVVTYT++I G C A+   EA+ LF +M   GV PN+ ++N ++    
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   MD A  LL+ +   G++PD   Y T + G C   ++  AK +   M+  G K    
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ L++ Y K+      L L  EM    I+  VV    L  GL +   V +A   F+ +
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603

Query: 301 QRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
             + G+ A+   +   IDGLCK+  +  A  LF  +       D  AY SL+DG  K G 
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +  AL L   +    +  +++ Y+ ++ GL +  Q+ KAR    +M    + P+ +
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 7/332 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +S  F +   +L+     + VT+T+LI GLC   R+ EA  LF K+   G  P++ +
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++G  +  +   AL L  E+  G G      +P+ + Y T I GLC    ++ AK 
Sbjct: 475 YNALIHGFVKAKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKV 528

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++ +MK+  IK N + YT+++  +  + +  E   L  EM +  ++  VVTF V++D LC
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588

Query: 181 KNGKMDEASRLLDLMIQH-GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           KN  + +A    + +    G++ +A  +  ++DG C   +V  A  LF  M   G     
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ L++G  K   +  AL+L  +M   G+K D++ + +L  GL   +Q+++A    +E
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 708

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           M   G+  D     + +    + G I EAVEL
Sbjct: 709 MIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 94/176 (53%), Gaps = 7/176 (3%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           VTF  LI GLC    + +A   F ++   FG + +   +T +++GLC+ +    A  LFE
Sbjct: 578 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           +M       G+V  P+   YT+++DG  K+G V +A  L  +M +  +K +++ YTS++ 
Sbjct: 638 QMVQK----GLV--PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           G  +     +A+    EM+ +G+ P+ V    ++ +  + G +DEA  L   +++H
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/431 (34%), Positives = 226/431 (52%), Gaps = 13/431 (3%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F VL R+  S FTP+   F  LI        + EA  ++ K+ V    P +     +++G
Sbjct: 113 FNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDG 167

Query: 68  LCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           L +         ++ +M A G         PN VTY T+IDG C++G   KA  L  +M 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARG-------ASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +K I P VV YT +IRG C     +EA+ +F  M + G+ PN+ T+N +MD  CK   + 
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A  L   M+  G+ P+  T+  L+DG C T  +  A++  + M S G    +F Y+ LI
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +GYCK   +  ALSL+SE+    I PDV  ++ L  GL  + ++E A  L  EM++ G  
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY T IDG CK G + +A+E+   +     E +I  +++LIDG CK+G++E A+ L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           +  +    L+P+VV Y+ +I G   DG   +A  L  +M+E  + PNV T   LI G  +
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 427 INEPSKVIELL 437
               S  I+L 
Sbjct: 521 DGRISDAIKLF 531



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/375 (35%), Positives = 196/375 (52%), Gaps = 6/375 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++ GL  + R      ++  +   G  P+V TY TL++G CR    + A  LF+EM    
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                   P  V YT +I GLC E  + +A+ +   M++  + PN+ TY +++ G+C   
Sbjct: 224 ------IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIA 277

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
              +A  L+ EM+  G+ PNVVTF +++D LCK  +M  A + L  M   GV P+ F YN
Sbjct: 278 HVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYN 337

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+DG+C  G ++ A  L   +E       VF+YSILI G C    +E A  L  EM  K
Sbjct: 338 CLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK 397

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  P+ V +NTL  G  +   +E+A ++  +M   G+  +  T+ T IDG CK G +  A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + L+  + I     D+ AY +LIDG  K G  + A  L + +    L PNV T S +I G
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517

Query: 389 LCNDGQMDKARDLFL 403
           LC DG++  A  LFL
Sbjct: 518 LCKDGRISDAIKLFL 532



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR    + V G ++    +P+ VT+ +LI G C +   ++A  LF ++      P V  Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ GLC  S    A ++F  M N     G++  PN  TY T++DG CK   V KA EL
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNS----GML--PNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + PNVVT+  +I G C   +   A++  I+M   GV PN+  +N ++D  CK
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + EA  L   + +H + PD FTY+ L+ G C   R+  A  L   M+  G      +
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GYCK   +E A+ + S+M  KGI+P+++  +TL  G  +  ++E A  L+ EM 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D   Y   IDG  K+G   EA  L   ++      ++   + LIDGLCK GR+ 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 362 IALELF 367
            A++LF
Sbjct: 526 DAIKLF 531



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 198/385 (51%), Gaps = 8/385 (2%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN   +  +I    + G V++A  +  +M   ++ P +     V+ G      ++   ++
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           + +M+ +G  PNVVT+  ++D  C+ G   +A RL D MI+  + P    Y  L+ G C 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             R++ A+ +F +M + G    +++Y+ +++GYCK   ++ AL LY EML  G+ P+VV 
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
              L  GL +  ++  A K   +M   GV  + + Y   IDG CK G + EA+ L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +   D+  Y+ LI GLC   R+E A  L + +     +PN VTY+ +I G C +G M+
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA ++   M E  + PN+ITF  LI G+ +  +    + L  +M    ++PD    + ++
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 457 DLLAKNEISLNSLPSFTVHEQQEEV 481
           D   K+    N+  +F +H++ +E 
Sbjct: 481 DGHFKDG---NTKEAFRLHKEMQEA 502



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 204/423 (48%), Gaps = 46/423 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+   +  LI G C    + EA +L +++      PDVFTY+ L+ GLC       A  L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM       G +  PN VTY T+IDG CKEG ++KA E+  QM +K I+PN++T++++
Sbjct: 391 LQEMKKK----GFL--PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C A     A  L+ EM+ +G+ P+VV +  ++D   K+G   EA RL   M + G+
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVS---MESMGCKHTVFSYSILINGYCKNKEIEG 257
            P+ FT + L+DG C  GR++ A +LF++    ++ G K      S+        +    
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLY-------QMCSL 557

Query: 258 ALSLY-------------SEMLSKGIKPDVVIHNTL-----------FVGLFEIHQVERA 293
           ALSL+             +++ +   +P   +H  L           ++      +V   
Sbjct: 558 ALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLF 617

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
           F++   +++N  + D+++    +        +VE  ++   +     E  I    SLI  
Sbjct: 618 FRIL--LRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISM 675

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
              +G +  A  +F  +P      N+++++ +I    ++ + +KA  LF  M+ + V P+
Sbjct: 676 YSATGNVADAHNMFDEIPS----KNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPD 731

Query: 414 VIT 416
           ++T
Sbjct: 732 IVT 734



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 100/479 (20%), Positives = 185/479 (38%), Gaps = 96/479 (20%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  ++ +    P+ +TF++LI G C   ++  A  L+T++ + G  PDV  Y
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++G  +  +T  A  L +EM     E G+   PN  T + +IDGLCK+G +  A +L
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQ----EAGL--HPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 122 LLQMK------------DKNIKPNVVTYTSVIRGFC------------------------ 145
            L               D+++        S+ RG                          
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLH 590

Query: 146 --------------YAKDWNEAK-RLFIEMMDQGVQPNVVTFNVI--MDELCKNGKMDEA 188
                         Y +  N +K  LF  ++ +    ++ +F+++  +        + E 
Sbjct: 591 THLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEG 650

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++  L+I  G  P  F   +L+  +  TG V  A  +F  + S      + S++ +I+ 
Sbjct: 651 KQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPS----KNLISWTSVISA 706

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           Y  N+    AL L+ +M    ++PD+V          ++  ++    +   ++  G+  D
Sbjct: 707 YVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTD 766

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTL--------------------------RILKCEF 342
                + I+   K G I  A      L                          R +K ++
Sbjct: 767 LCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDY 826

Query: 343 DIRA----YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
            +R     +  ++D LC++G L  A E    +P   + PN V +  ++G     G  DK
Sbjct: 827 SLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGACSLQGMWDK 882


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/423 (32%), Positives = 217/423 (51%), Gaps = 47/423 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V++ ++++GLC   R      L  ++   GC P++ T++TL+  LCR         L
Sbjct: 215 PDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRN-------GL 267

Query: 81  FE---EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           FE   E+     E G  C P+   Y TIIDG+CKE  ++ A+ +L +M    + PNVV Y
Sbjct: 268 FERVHEVHAQMAEHG--CAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCY 325

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            ++++G C A  W EA+ L  EM D+    + VTFN+++D LC+NG +D    +L+ M++
Sbjct: 326 NTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLE 385

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           HG  PD  TY T+++GFC  G ++ A  L  SM + GC+    SY+I++ G C  +    
Sbjct: 386 HGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVD 445

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L S+M+ +G  P+ V  NTL   L +   VE+A +L  +M  NG + D  +Y T ID
Sbjct: 446 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 505

Query: 318 GLCKNGYIVEAVEL-----------------------------------FHTLRILKCEF 342
           GL K G   EA+EL                                   F  ++      
Sbjct: 506 GLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRS 565

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D   YN++I  LCK G  + A+E    +     VPN  TY+I+I GL ++G + +A+++ 
Sbjct: 566 DAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEIL 625

Query: 403 LDM 405
            ++
Sbjct: 626 TEL 628



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 218/434 (50%), Gaps = 7/434 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           +++ +C +  + EA  L   L   FGCEPDV +Y  ++ GLC         +L EEM   
Sbjct: 187 VLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAA 246

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                  C PN VT++T+I  LC+ G  ++  E+  QM +    P+V  Y ++I G C  
Sbjct: 247 G------CPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKE 300

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           +    A+ +   M   G+ PNVV +N ++  LC   + +EA  LL  M       D  T+
Sbjct: 301 ERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTF 360

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L+D  C  G V+   E+   M   GC   V +Y+ +ING+CK   I+ A+ L   M +
Sbjct: 361 NILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAA 420

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            G +P+ V +  +  GL    +   A +L  +M + G   +  T+ T I+ LCK G + +
Sbjct: 421 CGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 480

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A+EL   + +  C  D+ +Y+++IDGL K+G  + ALEL   +    + PN + YS +  
Sbjct: 481 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIAS 540

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            L  +G+++K   +F ++++  V  + + ++ +I    +  E  + IE L  M     +P
Sbjct: 541 ALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVP 600

Query: 448 DASIVSIVVDLLAK 461
           + S  +I++  LA 
Sbjct: 601 NESTYTILIRGLAS 614



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 215/442 (48%), Gaps = 7/442 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+A T+  L++ LCA  RI +A A+   +   GC P    Y   +   CR S    A+ 
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVTYT 138
           +  ++ +G G     C  +      ++  +C +G VD+A  LL  +      +P+VV+Y 
Sbjct: 168 VLRDL-HGRG-----CALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYN 221

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +V+RG C A+ W   + L  EM+  G  PN+VTF+ ++  LC+NG  +    +   M +H
Sbjct: 222 AVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEH 281

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  PD   Y T++DG C   R+  A+ +   M S G    V  Y+ L+ G C     E A
Sbjct: 282 GCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEA 341

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L +EM  K    D V  N L   L +   V+R  ++ ++M  +G   D  TY T I+G
Sbjct: 342 EGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVING 401

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G I EAV L  ++    C  +  +Y  ++ GLC + R   A EL   +      PN
Sbjct: 402 FCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPN 461

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VT++ +I  LC  G +++A +L   M  N   P++I++  +I G  +     + +ELL+
Sbjct: 462 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLN 521

Query: 439 KMKEINVMPDASIVSIVVDLLA 460
            M +  + P+  I S +   L+
Sbjct: 522 VMVKKGMSPNTIIYSSIASALS 543



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 203/472 (43%), Gaps = 48/472 (10%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
            ++LI+ LCA  R  EAA   +          V  Y  +V G CR      A  L     
Sbjct: 50  LSALIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLAAARRLAAS-- 104

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                  V   PN  TY  ++  LC  G +  A  +L  M  +   P    Y   +   C
Sbjct: 105 -------VPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAAC 157

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHGVRPDA 204
            A  +  A  +  ++  +G   +V   N+++  +C  G +DEA RLL DL+   G  PD 
Sbjct: 158 RASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDV 217

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL------------------- 245
            +YN +L G C+  R  H ++L   M + GC   + ++S L                   
Sbjct: 218 VSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQ 277

Query: 246 ----------------INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
                           I+G CK + +E A  + + M S G+ P+VV +NTL  GL    +
Sbjct: 278 MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            E A  L  EM       D  T+   +D LC+NG +   +E+   +    C  D+  Y +
Sbjct: 338 WEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTT 397

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +I+G CK G ++ A+ L RS+      PN V+Y+I++ GLC+  +   A +L   M +  
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             PN +TF+ LI    +     + IELL +M      PD    S V+D L K
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 509



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 158/332 (47%), Gaps = 43/332 (12%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-------------------- 49
           +L R+     +P+ V + +L+KGLC+  R  EA  L  ++                    
Sbjct: 309 ILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLC 368

Query: 50  ------RVF---------GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
                 RV          GC PDV TYTT++NG C+      A+ L   MA         
Sbjct: 369 QNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMA------ACG 422

Query: 95  CEPNTVTYTTIIDGLCK-EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           C PNTV+YT ++ GLC  E +VD A+EL+ QM  +   PN VT+ ++I   C      +A
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVD-AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 481

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             L  +M+  G  P++++++ ++D L K G  DEA  LL++M++ G+ P+   Y+++   
Sbjct: 482 IELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASA 541

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
               GR+N   ++F +++    +     Y+ +I+  CK  E + A+   + M+S G  P+
Sbjct: 542 LSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPN 601

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
              +  L  GL     V+ A ++  E+   G 
Sbjct: 602 ESTYTILIRGLASEGFVKEAQEILTELCSKGA 633



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 159/363 (43%), Gaps = 4/363 (1%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  ++ G C+ G   +            + PN  TY  ++R  C      +A  +  +M 
Sbjct: 82  YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G  P    ++V ++  C+      A  +L  +   G   D    N +L   C  G V+
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 222 HAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
            A  L   +  S GC+  V SY+ ++ G C  +       L  EM++ G  P++V  +TL
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L      ER  ++  +M  +G A D   Y T IDG+CK   +  A  + + +     
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             ++  YN+L+ GLC + R E A  L   +       + VT++I++  LC +G +D+  +
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           +   M E+  +P+VIT+  +I GF +     + + LL  M      P+    +IV+  L 
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438

Query: 461 KNE 463
             E
Sbjct: 439 SAE 441



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 10/238 (4%)

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++ GYC+  +     +      S  + P+   +  L   L    ++  A  + D+M 
Sbjct: 82  YNAMVAGYCRAGQ---LAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G A     Y   ++  C+      AV +   L    C  D+   N ++  +C  G ++
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 362 IALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A+ L R L P     P+VV+Y+ ++ GLC   +    +DL  +M      PN++TF  L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI------SLNSLPSF 472
           I    R     +V E+  +M E    PD  + + ++D + K E        LN +PS+
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSY 316


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 228/462 (49%), Gaps = 6/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V+ G+ +L + LK+   P   T+  LI G C        + +   +      P ++TY
Sbjct: 242 GQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTY 301

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NGLC+    + A  +F ++ +          P+ V YTT+I GLC+ G   +A++L
Sbjct: 302 QEIINGLCKNEECLEAYRVFNDLKDRG------YAPDRVMYTTMIHGLCEMGSFGEARKL 355

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M DK ++PN  TY +++ G   + D+  A  L+ EM ++G     VT N I+ ELC 
Sbjct: 356 WFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCS 415

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK DEA  +   M + G++ DA TYN+L+ GFC  G+V+    L   + +   + +V  
Sbjct: 416 RGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSL 475

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y +LI   CK+ + E A  L  +M SKG+ P+   ++T+  G  +    E   +L++E  
Sbjct: 476 YELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETC 535

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G    T T    I  LC  G   EA E+F  +     + D   YNSLI G CK G++ 
Sbjct: 536 NKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVG 595

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ++ L   L    L P+  +Y+ +I  LC +G  + A+ L+ DM    + P+    + LI
Sbjct: 596 KSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLI 655

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            G  +    ++ ++ L  M E  + P  +    + + L ++E
Sbjct: 656 SGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQSE 697



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 214/479 (44%), Gaps = 39/479 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F PD+ +    +K LC    I EA  ++ +L+  G    +    ++++G  +   T +  
Sbjct: 152 FIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLF 211

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
             ++EM       G   + NT T   +I   C  G V +  ELL Q     + P   TY 
Sbjct: 212 EFYQEMIKA----GTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYN 267

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I GFC AK++     +   M+ +   P + T+  I++ LCKN +  EA R+ + +   
Sbjct: 268 KLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDR 327

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  PD   Y T++ G C  G    A++L+  M   G +   ++Y+ +++G  K+ + E A
Sbjct: 328 GYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERA 387

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             LY+EM +KG     V  N +   L    + + AF++F +M   G+ AD  TY + I G
Sbjct: 388 CELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRG 447

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G + E + L + L     +  +  Y  LI   CK G  E A  L   +    L PN
Sbjct: 448 FCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPN 507

Query: 379 VVTYSIMIGG-----------------------------------LCNDGQMDKARDLFL 403
             TY  M+ G                                   LC+ G+ D+A ++F 
Sbjct: 508 AYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFK 567

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            M E  +  + IT++ LIRGF +  +  K + LL+++    + P AS  + ++  L +N
Sbjct: 568 KMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQN 626



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 37/330 (11%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG---------- 213
           G  P+  +    +  LC  G ++EA  +   + + G+R      N++L G          
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELL 210

Query: 214 ---------------------------FCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
                                      FC +G+V    EL       G      +Y+ LI
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G+C+ K       +   M+++   P +  +  +  GL +  +   A+++F++++  G A
Sbjct: 271 AGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA 330

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D   Y T I GLC+ G   EA +L+  +     + +   YN+++ G  KSG  E A EL
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACEL 390

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           +  +         VT + +I  LC+ G+ D+A ++F  M E  +  + IT++ LIRGF +
Sbjct: 391 YNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCK 450

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVV 456
             +  + + LL+++   +  P  S+  +++
Sbjct: 451 EGKVDERMNLLNELVAQDPQPSVSLYELLI 480



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 5/203 (2%)

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PD +  N LF  L +   V RA K+  ++   G   D+ +   ++  LC  G+I EA+E+
Sbjct: 122 PDPISSNMLFEALLDAKAV-RAAKMVRDIA--GFIPDSASLEQYVKCLCGVGFIEEAIEV 178

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL-PCGVLV-PNVVTYSIMIGGL 389
           +  L+       I A NS++ G  K+G+ E+  E ++ +   G     N  T   +I   
Sbjct: 179 YFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAF 238

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C+ GQ+ +  +L     +  + P   T++ LI GF +    + + E+LH M   N +P  
Sbjct: 239 CDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTI 298

Query: 450 SIVSIVVDLLAKNEISLNSLPSF 472
                +++ L KNE  L +   F
Sbjct: 299 YTYQEIINGLCKNEECLEAYRVF 321


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/394 (34%), Positives = 218/394 (55%), Gaps = 7/394 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + D  +FT+LI   C  +R+  A +   K+   G EP + T+ +LVNG C  +    A++
Sbjct: 111 SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +++       G+  EPN V Y TIID LC++G V+ A ++L  MK   I+P+VVTY S
Sbjct: 171 LVDQIV------GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNS 224

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I    ++  W  + R+  +MM  G+ P+V+TF+ ++D   K G++ EA +  + MIQ  
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V P+  TYN+L++G C+ G ++ AK++   + S G      +Y+ LINGYCK K ++  +
Sbjct: 285 VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGM 344

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +   M   G+  D   +NTL+ G  +  +   A K+   M   GV  D +T+   +DGL
Sbjct: 345 KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C +G I +A+     L+  K    I  YN +I GLCK+ ++E A  LF SL    + P+V
Sbjct: 405 CDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDV 464

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVP 412
           +TY  M+ GL       +A +L+  M+ E+ ++P
Sbjct: 465 ITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 219/428 (51%), Gaps = 7/428 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  V F+ L+  +   ++     +LF  L + G   D++++TTL++  CR +   +AL+ 
Sbjct: 77  PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M     + G   EP+ VT+ ++++G C      +A  L+ Q+     +PNVV Y ++
Sbjct: 137 LGKMM----KLGF--EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTI 190

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C     N A  +   M   G++P+VVT+N ++  L  +G    ++R+L  M++ G+
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T++ L+D +   G++  AK+ +  M        + +Y+ LING C +  ++ A  
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + + ++SKG  P+ V +NTL  G  +  +V+   K+   M R+GV  DT+TY T   G C
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G    A ++   +       D+  +N L+DGLC  G++  AL     L     V  ++
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I+I GLC   +++ A  LF  +    V P+VIT+  ++ G  R     +  EL  KM
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490

Query: 441 -KEINVMP 447
            KE  +MP
Sbjct: 491 QKEDGLMP 498



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 195/369 (52%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            R+S     LG+++K  F P  VTF SL+ G C  +R  EA +L  ++   G EP+V  Y
Sbjct: 128 ARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIY 187

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++ LC       AL++ + M     + G+   P+ VTY ++I  L   G    +  +
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMK----KMGI--RPDVVTYNSLITRLFHSGTWGVSARI 241

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M    I P+V+T++++I  +       EAK+ + EM+ + V PN+VT+N +++ LC 
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G +DEA ++L++++  G  P+A TYNTL++G+C   RV+   ++   M   G     F+
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L  GYC+  +   A  +   M+S G+ PD+   N L  GL +  ++ +A    +++Q
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++       TY   I GLCK   + +A  LF +L +     D+  Y +++ GL +     
Sbjct: 422 KSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWR 481

Query: 362 IALELFRSL 370
            A EL+R +
Sbjct: 482 EAHELYRKM 490



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 212/409 (51%), Gaps = 8/409 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF  +      P +  ++ L+  + + +     ++LF  +       G+    +  
Sbjct: 62  DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE----MLGI--SHDLY 115

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++TT+ID  C+   +  A   L +M     +P++VT+ S++ GFC+   + EA  L  ++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +  G +PNVV +N I+D LC+ G+++ A  +L  M + G+RPD  TYN+L+     +G  
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             +  +   M  MG    V ++S LI+ Y K  ++  A   Y+EM+ + + P++V +N+L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL     ++ A K+ + +   G   +  TY T I+G CK   + + +++   +     
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           + D   YN+L  G C++G+   A ++  R + CGV  P++ T++I++ GLC+ G++ KA 
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH-PDMYTFNILLDGLCDHGKIGKAL 414

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               D++++  V  +IT++++I+G  + ++      L   +    V PD
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPD 463



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 163/356 (45%), Gaps = 35/356 (9%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y   +R   ++  +N+A  LF +M +    P++V F+ ++  + K  K +    L   + 
Sbjct: 47  YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+  D +++ TL+D FC   R++ A      M  +G + ++ ++  L+NG+C      
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF---------------------- 294
            A+SL  +++  G +P+VVI+NT+   L E  QV  A                       
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226

Query: 295 -------------KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
                        ++  +M R G++ D  T+   ID   K G ++EA + ++ +      
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            +I  YNSLI+GLC  G L+ A ++   L      PN VTY+ +I G C   ++D    +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
              M  + V  +  T++ L +G+ +  + S   ++L +M    V PD    +I++D
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 6/128 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S    VLGR++     PD  TF  L+ GLC   +I +A      L+       + TY
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ GLC+      A  LF  +A      GV   P+ +TY T++ GL ++    +A EL
Sbjct: 433 NIIIKGLCKADKVEDAWYLFCSLALK----GV--SPDVITYITMMIGLRRKRLWREAHEL 486

Query: 122 LLQMKDKN 129
             +M+ ++
Sbjct: 487 YRKMQKED 494



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++    V L  + KS      +T+  +IKGLC   ++ +A  LF  L + G  PDV TY
Sbjct: 408 GKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG 89
            T++ GL R      A  L+ +M   +G
Sbjct: 468 ITMMIGLRRKRLWREAHELYRKMQKEDG 495


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 239/453 (52%), Gaps = 6/453 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V  R++   F P   T++SL+ GL     I     L  ++   G +P+V+T+T  +  L 
Sbjct: 212 VYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLG 271

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R      A  + + M +        C P+ VTYT +ID LC    +D AKE+  +MK   
Sbjct: 272 RAGKINEAYEILKRMDDEG------CGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGR 325

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            KP+ VTY +++  F   +D +   + + EM   G  P+VVTF +++D LCK G   EA 
Sbjct: 326 HKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 385

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             LD+M   G+ P+  TYNTL+ G     R++ A E+F +MES+G K T ++Y + I+ Y
Sbjct: 386 AKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYY 445

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K+ +   AL  + +M +KGI P++V  N     L +  +   A ++F  ++  G+  D+
Sbjct: 446 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 505

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   +    K G I EA++L   +    CE D+   NSLI+ L K+ R++ A ++F  
Sbjct: 506 VTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMR 565

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    L P VVTY+ ++ GL  +G++ +A +LF  M +    PN ITF+ L     + +E
Sbjct: 566 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 625

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +  +++L KM ++  +PD    + ++  L KN
Sbjct: 626 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 658



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 227/437 (51%), Gaps = 12/437 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++  + +L R+      PD VT+T LI  LC   ++  A  +F K++    +PD  TY
Sbjct: 274 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTY 333

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++     +  + ++N F      +G       P+ VT+T ++D LCK G   +A   
Sbjct: 334 ITLLDRF-SDNRDLDSVNQFWSEMEKDGHV-----PDVVTFTILVDALCKAGNFGEAFAK 387

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+D+ I PN+ TY ++I G       ++A  +F  M   GV+P   T+ V +D   K
Sbjct: 388 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGK 447

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    A    + M   G+ P+    N  L      GR   AK++F  ++ +G      +
Sbjct: 448 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 507

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++++  Y K  EI+ A+ L SEM+    +PDV++ N+L   L++  +V+ A+K+F  M+
Sbjct: 508 YNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 567

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +     TY T + GL KNG I EA+ELF  +    C  +   +N+L D LCK+  + 
Sbjct: 568 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 627

Query: 362 IALE-LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +AL+ LF+ +  G  VP+V TY+ +I GL  +GQ+ +A   F  M++  V P+ +T   L
Sbjct: 628 LALKMLFKMMDMGC-VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFVTLCTL 685

Query: 421 IRGFIR---INEPSKVI 434
           + G ++   I +  K+I
Sbjct: 686 LPGVVKAGLIEDAYKII 702



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 230/497 (46%), Gaps = 41/497 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     V   + K     D  T+ ++ K L  +  + +A     K+R FG   + ++Y
Sbjct: 134 GKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSY 193

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ L ++     A+ ++  M            P+  TY++++ GL K   ++    L
Sbjct: 194 NGLIHLLLKSRFCTEAMEVYRRMILDG------FRPSLQTYSSLMVGLGKRRDIESVMGL 247

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   +KPNV T+T  IR    A   NEA  +   M D+G  P+VVT+ V++D LC 
Sbjct: 248 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 307

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+D A  +   M     +PD  TY TLLD F     ++   + +  ME  G    V +
Sbjct: 308 ARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVT 367

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++IL++  CK      A +    M  +GI P++  +NTL  GL  +H+++ A ++FD M+
Sbjct: 368 FTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNME 427

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV    +TY  FID   K+G  V A+E F  ++      +I A N+ +  L K+GR  
Sbjct: 428 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 487

Query: 362 IALELFRSLPCGVLVPNVVTYSIM-----------------------------------I 386
            A ++F  L    LVP+ VTY++M                                   I
Sbjct: 488 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLI 547

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L    ++D+A  +F+ M+E  + P V+T++ L+ G  +  +  + IEL   M +    
Sbjct: 548 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 607

Query: 447 PDASIVSIVVDLLAKNE 463
           P+    + + D L KN+
Sbjct: 608 PNTITFNTLFDCLCKND 624



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 244/506 (48%), Gaps = 58/506 (11%)

Query: 3    RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            RV   + +  R+ +    P  VT+ +L+ GL    +I EA  LF  +   GC P+  T+ 
Sbjct: 555  RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 614

Query: 63   TLVNGLCRTSHTIVALN-LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL + LC+     +AL  LF+ M  G       C P+  TY TII GL K G V +A   
Sbjct: 615  TLFDCLCKNDEVTLALKMLFKMMDMG-------CVPDVFTYNTIIFGLVKNGQVKEAMCF 667

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR---------------LFIE------M 160
              QMK K + P+ VT  +++ G   A    +A +               LF E      +
Sbjct: 668  FHQMK-KLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSIL 726

Query: 161  MDQGVQPNVVTFN--VIMDELCKNG------------KMDEAS--RLL--DLMIQHGVRP 202
             + G+  N V+F+  ++ + +C++G            K + AS  R+L        GV+P
Sbjct: 727  AEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQP 785

Query: 203  DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
               TYN L+ G      +  A+++F+ +++ GC   V +Y+ L++ Y K+ +I+    +Y
Sbjct: 786  KLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIY 845

Query: 263  SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF-DEMQRNGVAADTWTYRTFIDGLCK 321
             EM +   +P+ + HN +  GL +   V+ A  L+ D M     +    TY   IDGL K
Sbjct: 846  KEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK 905

Query: 322  NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            +G + EA +LF  +    C  +   YN LI+G  K+G  + A  LF+ +    + P++ T
Sbjct: 906  SGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 965

Query: 382  YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
            YS+++  LC  G++D+    F +++E+ + P+V+ ++++I G  + +   + + L ++MK
Sbjct: 966  YSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMK 1025

Query: 442  EINVMPDASIVSIVVDLLAKNEISLN 467
            +           I  DL   N + LN
Sbjct: 1026 KSR--------GITPDLYTYNSLILN 1043



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 167/317 (52%), Gaps = 8/317 (2%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            P   T+  LI GL     I  A  +F +++  GC PDV TY  L++   ++        +
Sbjct: 785  PKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEI 844

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ-MKDKNIKPNVVTYTS 139
            ++EM+         CEPNT+T+  +I GL K G VD A +L    M D++  P   TY  
Sbjct: 845  YKEMSAHE------CEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 898

Query: 140  VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            +I G   +    EAK+LF  M D G +PN   +N++++   K G+ D A  L   M++ G
Sbjct: 899  LIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 958

Query: 200  VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            VRPD  TY+ L+D  C+ GRV+     F  ++  G    V  Y+++ING  K   +E AL
Sbjct: 959  VRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEAL 1018

Query: 260  SLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L++EM  S+GI PD+  +N+L + L     VE A K+++E+QR G+  + +T+   I G
Sbjct: 1019 VLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1078

Query: 319  LCKNGYIVEAVELFHTL 335
               +G    A  ++ T+
Sbjct: 1079 YSLSGKPEHAYAVYQTM 1095



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 216/463 (46%), Gaps = 11/463 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +L  ++++C  PD +   SLI  L    R+ EA  +F +++    +P V T
Sbjct: 518 VGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 577

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+ GL +      A+ LFE M          C PNT+T+ T+ D LCK   V  A +
Sbjct: 578 YNTLLAGLGKNGKIQEAIELFEGMVQKG------CPPNTITFNTLFDCLCKNDEVTLALK 631

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L +M D    P+V TY ++I G        EA   F   M + V P+ VT   ++  + 
Sbjct: 632 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVV 690

Query: 181 KNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHT 238
           K G +++A +++ + +     +P    +  L+        +++A      + + G C+  
Sbjct: 691 KAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDG 750

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
                 +I    K+    GA  L+ +     G++P +  +N L  GL E   +E A  +F
Sbjct: 751 DSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 810

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            +++  G   D  TY   +D   K+G I E  E++  +   +CE +   +N +I GL K+
Sbjct: 811 LQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKA 870

Query: 358 GRLEIALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           G ++ AL+L+  L       P   TY  +I GL   G++ +A+ LF  M +    PN   
Sbjct: 871 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAI 930

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +++LI GF +  E      L  +M +  V PD    S++VD L
Sbjct: 931 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 973



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 219/473 (46%), Gaps = 41/473 (8%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T   +++ L  + +I E A +F  ++    + D  TY T+   L        A     +M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                EFG V   N  +Y  +I  L K  F  +A E+  +M     +P++ TY+S++ G 
Sbjct: 182 R----EFGFVL--NAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGL 235

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
              +D      L  EM   G++PNV TF + +  L + GK++EA  +L  M   G  PD 
Sbjct: 236 GKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 295

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  L+D  C   +++ AKE+F  M++   K    +Y  L++ +  N++++     +SE
Sbjct: 296 VTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSE 355

Query: 265 MLSKGIKPDVV-----------------------------------IHNTLFVGLFEIHQ 289
           M   G  PDVV                                    +NTL  GL  +H+
Sbjct: 356 MEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHR 415

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           ++ A ++FD M+  GV    +TY  FID   K+G  V A+E F  ++      +I A N+
Sbjct: 416 LDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 475

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
            +  L K+GR   A ++F  L    LVP+ VTY++M+      G++D+A  L  +M EN 
Sbjct: 476 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENC 535

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             P+VI  + LI    + +   +  ++  +MKE+ + P     + ++  L KN
Sbjct: 536 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 588



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 211/437 (48%), Gaps = 37/437 (8%)

Query: 2    GRVSHGFVVLGRILKSCF-TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            G +   + ++   L SC   P  + +  L+  + AE+ I  A +   +L           
Sbjct: 693  GLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERL----------- 741

Query: 61   YTTLVNGLCRTSHTIV---------------ALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
               + NG+CR   +I+               A  LFE+      + GV  +P   TY  +
Sbjct: 742  ---VANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTK---DLGV--QPKLPTYNLL 793

Query: 106  IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
            I GL +   ++ A+++ LQ+K+    P+V TY  ++  +  +   +E   ++ EM     
Sbjct: 794  IGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHEC 853

Query: 166  QPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
            +PN +T N+++  L K G +D+A  L  DLM      P A TY  L+DG   +GR+  AK
Sbjct: 854  EPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 913

Query: 225  ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            +LF  M   GC+     Y+ILING+ K  E + A +L+  M+ +G++PD+  ++ L   L
Sbjct: 914  QLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 973

Query: 285  FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEFD 343
              + +V+     F E++ +G+  D   Y   I+GL K   + EA+ LF+ ++  +    D
Sbjct: 974  CMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPD 1033

Query: 344  IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
            +  YNSLI  L  +G +E A +++  +    L PNV T++ +I G    G+ + A  ++ 
Sbjct: 1034 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1093

Query: 404  DMEENAVVPNVITFDML 420
             M      PN  T++ L
Sbjct: 1094 TMVTGGFSPNTGTYEQL 1110



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 220/500 (44%), Gaps = 75/500 (15%)

Query: 12   GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
            G + K C  P+ +TF +L   LC    +  A  +  K+   GC PDVFTY T++ GL + 
Sbjct: 600  GMVQKGC-PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 658

Query: 72   ---------------------------------------SHTIVA----------LNLFE 82
                                                   ++ I+A           NLF 
Sbjct: 659  GQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFW 718

Query: 83   EMANGN--GEFGVVCEPNTVTYTT--IIDGLCKEG---------------FVDKAKELLL 123
            E   G+   E G+    N V+++   + +G+C++G                   A+ L  
Sbjct: 719  EDLMGSILAEAGI---DNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFE 775

Query: 124  QM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +  KD  ++P + TY  +I G   A     A+ +F+++ + G  P+V T+N ++D   K+
Sbjct: 776  KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKS 835

Query: 183  GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS-MESMGCKHTVFS 241
            GK+DE   +   M  H   P+  T+N ++ G    G V+ A +L+   M       T  +
Sbjct: 836  GKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 895

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            Y  LI+G  K+  +  A  L+  M   G +P+  I+N L  G  +  + + A  LF  M 
Sbjct: 896  YGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 955

Query: 302  RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            + GV  D  TY   +D LC  G + E +  F  L+      D+  YN +I+GL K  RLE
Sbjct: 956  KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLE 1015

Query: 362  IALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL LF  +     + P++ TY+ +I  L   G +++A  ++ +++   + PNV TF+ L
Sbjct: 1016 EALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1075

Query: 421  IRGFIRINEPSKVIELLHKM 440
            IRG+    +P     +   M
Sbjct: 1076 IRGYSLSGKPEHAYAVYQTM 1095



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 154/337 (45%), Gaps = 35/337 (10%)

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T N +++ L  +GK++E + + DLM +  ++ D  TY T+     + G +  A      M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G     +SY+ LI+   K++    A+ +Y  M+  G +P +  +++L VGL +   +
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E    L  EM+  G+  + +T+   I  L + G I EA E+   +    C  D+  Y  L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301

Query: 351 IDGLCKSGRLEIALELFRSLPCGVL----------------------------------- 375
           ID LC + +L+ A E+F  +  G                                     
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           VP+VVT++I++  LC  G   +A      M +  ++PN+ T++ LI G +R++     +E
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 421

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           +   M+ + V P A    + +D   K+  S+++L +F
Sbjct: 422 IFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 458



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 7/230 (3%)

Query: 19   FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            F+P A T+  LI GL    R+ EA  LF  +  +GC P+   Y  L+NG  +      A 
Sbjct: 889  FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAAC 948

Query: 79   NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
             LF+ M     + GV   P+  TY+ ++D LC  G VD+      ++K+  + P+VV Y 
Sbjct: 949  ALFKRMV----KEGV--RPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYN 1002

Query: 139  SVIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G        EA  LF EM   +G+ P++ T+N ++  L   G ++EA ++ + + +
Sbjct: 1003 LIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1062

Query: 198  HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
             G+ P+ FT+N L+ G+ L+G+  HA  ++ +M + G      +Y  L N
Sbjct: 1063 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/398 (22%), Positives = 176/398 (44%), Gaps = 35/398 (8%)

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
           T T   +++ L  +G +++   +   M+ + IK +  TY ++ +         +A     
Sbjct: 120 TETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALR 179

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF---- 214
           +M + G   N  ++N ++  L K+    EA  +   MI  G RP   TY++L+ G     
Sbjct: 180 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRR 239

Query: 215 --------------------------CL-----TGRVNHAKELFVSMESMGCKHTVFSYS 243
                                     C+      G++N A E+   M+  GC   V +Y+
Sbjct: 240 DIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 299

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +LI+  C  ++++ A  ++++M +   KPD V + TL     +   ++   + + EM+++
Sbjct: 300 VLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD 359

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D  T+   +D LCK G   EA      +R      ++  YN+LI GL +  RL+ A
Sbjct: 360 GHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 419

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           LE+F ++    + P   TY + I      G    A + F  M+   + PN++  +  +  
Sbjct: 420 LEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 479

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +     +  ++ + +K+I ++PD+   ++++   +K
Sbjct: 480 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 517



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVF 59
            +GRV  G      + +S   PD V +  +I GL    R+ EA  LF ++ +  G  PD++
Sbjct: 976  VGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLY 1035

Query: 60   TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            TY +L+  L        A  ++ E+           EPN  T+  +I G    G  + A 
Sbjct: 1036 TYNSLILNLGIAGMVEEAGKIYNEIQRAG------LEPNVFTFNALIRGYSLSGKPEHAY 1089

Query: 120  ELLLQMKDKNIKPNVVTY 137
             +   M      PN  TY
Sbjct: 1090 AVYQTMVTGGFSPNTGTY 1107


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 230/450 (51%), Gaps = 9/450 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     ++G +++    PD +T+ +LI GLC  S+  EA     K+   G EPD +TY
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEF-GVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            TL+ G C+     +A     E   G+  F G V  P+  TY ++IDGLC EG  ++A  
Sbjct: 325 NTLIAGYCKGGMVQLA-----ERIVGDAVFNGFV--PDQFTYRSLIDGLCHEGETNRALA 377

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +   K IKPNV+ Y ++I+G        EA +L  EM ++G+ P V TFN++++ LC
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + +A  L+ +MI  G  PD FT+N L+ G+    ++ +A E+   M   G    V+
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+NG CK  + E  +  Y  M+ KG  P++   N L   L    +++ A  L +EM
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGR 359
           +   V  D  T+ T IDG CKNG +  A  LF  +    K       YN +I    +   
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           + +A +LF+ +    L P+  TY +M+ G C  G ++      L+M EN  +P++ T   
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           +I      +   +   ++H+M +  ++P+A
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707



 Score =  237 bits (605), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 153/485 (31%), Positives = 244/485 (50%), Gaps = 10/485 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V  R+     TPD  +FT  +K  C  SR   A  L   +   GCE +V  Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T+V G    +       LF +M A+G      +C     T+  ++  LCK+G V + ++
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVS----LC---LSTFNKLLRVLCKKGDVKECEK 237

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL ++  + + PN+ TY   I+G C   + + A R+   +++QG +P+V+T+N ++  LC
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN K  EA   L  M+  G+ PD++TYNTL+ G+C  G V  A+ +       G     F
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI+G C   E   AL+L++E L KGIKP+V+++NTL  GL     +  A +L +EM
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF-DIRAYNSLIDGLCKSGR 359
              G+  +  T+   ++GLCK G + +A  L   + I K  F DI  +N LI G     +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM-ISKGYFPDIFTFNILIHGYSTQLK 476

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +E ALE+   +    + P+V TY+ ++ GLC   + +   + +  M E    PN+ TF++
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           L+    R  +  + + LL +MK  +V PDA     ++D   KN     +   F   E+  
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596

Query: 480 EVDES 484
           +V  S
Sbjct: 597 KVSSS 601



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 226/458 (49%), Gaps = 7/458 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           + G+ + G++L S  +    TF  L++ LC +  + E   L  K+   G  P++FTY   
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           + GLC+      A+ +   +           +P+ +TY  +I GLCK     +A+  L +
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGP------KPDVITYNNLIYGLCKNSKFQEAEVYLGK 311

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M ++ ++P+  TY ++I G+C       A+R+  + +  G  P+  T+  ++D LC  G+
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
            + A  L +  +  G++P+   YNTL+ G    G +  A +L   M   G    V +++I
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L+NG CK   +  A  L   M+SKG  PD+   N L  G     ++E A ++ D M  NG
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           V  D +TY + ++GLCK     + +E + T+    C  ++  +N L++ LC+  +L+ AL
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AVVPNVITFDMLIRG 423
            L   +    + P+ VT+  +I G C +G +D A  LF  MEE   V  +  T++++I  
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F      +   +L  +M +  + PD     ++VD   K
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 187/396 (47%), Gaps = 6/396 (1%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y   +    R      A+N+FE M   +      CEP   +Y  I+  L   G+ D+A +
Sbjct: 79  YVGAMKNYGRKGKVQEAVNVFERMDFYD------CEPTVFSYNAIMSVLVDSGYFDQAHK 132

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           + ++M+D+ I P+V ++T  ++ FC     + A RL   M  QG + NVV +  ++    
Sbjct: 133 VYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +     E   L   M+  GV     T+N LL   C  G V   ++L   +   G    +F
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++ I G C+  E++GA+ +   ++ +G KPDV+ +N L  GL +  + + A     +M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D++TY T I G CK G +  A  +           D   Y SLIDGLC  G  
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL LF       + PNV+ Y+ +I GL N G + +A  L  +M E  ++P V TF++L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           + G  ++   S    L+  M      PD    +I++
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 175/360 (48%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y   +    ++G V +A  +  +M   + +P V +Y +++     +  +++A ++++ M 
Sbjct: 79  YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           D+G+ P+V +F + M   CK  +   A RLL+ M   G   +   Y T++ GF       
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
              ELF  M + G    + +++ L+   CK  +++    L  +++ +G+ P++  +N   
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL +  +++ A ++   +   G   D  TY   I GLCKN    EA      +     E
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D   YN+LI G CK G +++A  +         VP+  TY  +I GLC++G+ ++A  L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F +     + PNVI ++ LI+G        +  +L ++M E  ++P+    +I+V+ L K
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 140/276 (50%), Gaps = 7/276 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG VS    ++  ++   + PD  TF  LI G   + ++  A  +   +   G +PDV+T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+NGLC+TS     +  ++ M          C PN  T+  +++ LC+   +D+A  
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKG------CAPNLFTFNILLESLCRYRKLDEALG 552

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDEL 179
           LL +MK+K++ P+ VT+ ++I GFC   D + A  LF +M +   V  +  T+N+I+   
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            +   +  A +L   M+   + PD +TY  ++DGFC TG VN   +  + M   G   ++
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL 672

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            +   +IN  C    +  A  +   M+ KG+ P+ V
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 44/246 (17%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++ +   +L  +L +   PD  T+ SL+ GLC  S+  +    +  +   GC P++FT+ 
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA---- 118
            L+  LCR      AL L EEM N +        P+ VT+ T+IDG CK G +D A    
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLF 589

Query: 119 --------------------------------KELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                                           ++L  +M D+ + P+  TY  ++ GFC 
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
             + N   +  +EMM+ G  P++ T   +++ LC   ++ EA+ ++  M+Q G+ P+A  
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV- 708

Query: 207 YNTLLD 212
            NT+ D
Sbjct: 709 -NTICD 713



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 145/321 (45%), Gaps = 5/321 (1%)

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLL-DLM 195
           T+VI+  C  KD  +A  +F  M  + G +  + T+  ++++L   GK +    +L D+ 
Sbjct: 11  TAVIK--C-QKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR 67

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G       Y   +  +   G+V  A  +F  M+   C+ TVFSY+ +++    +   
Sbjct: 68  ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYF 127

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A  +Y  M  +GI PDV           +  +   A +L + M   G   +   Y T 
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           + G  +  +  E  ELF  +        +  +N L+  LCK G ++   +L   +    +
Sbjct: 188 VGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV 247

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           +PN+ TY++ I GLC  G++D A  +   + E    P+VIT++ LI G  + ++  +   
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV 307

Query: 436 LLHKMKEINVMPDASIVSIVV 456
            L KM    + PD+   + ++
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLI 328


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 229/436 (52%), Gaps = 6/436 (1%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           SL+ GL     +  A  ++ ++   G E +V+T   +VN LC+  H I  +  F      
Sbjct: 155 SLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCK-DHKIDDVKPFLIDMEQ 213

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
            G F      + VTY T+I+  C+EG + +A E++  M  K +KP + TY +VI G C  
Sbjct: 214 KGIFA-----DIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKK 268

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
             +  AK +F EM+  G+ P+  T+N ++ E C+N    EA  +   M+  GV PD  ++
Sbjct: 269 GRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISF 328

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           ++L+      G ++ A   F  M++ G       Y+ILINGYC+N  +  AL +  +ML 
Sbjct: 329 SSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLE 388

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G   DVV +NT+  GL +   +  A  LFDEM   GV  D  T+ T I G CK G + +
Sbjct: 389 QGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGK 448

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A+ LF  +     + DI  YN LIDG CK+  +E A EL+  +    + PN ++Y+I++ 
Sbjct: 449 ALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVN 508

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           G CN G + +A  L+ +M    + P ++T + +I+G+ R  + SK  E L KM    V P
Sbjct: 509 GYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGP 568

Query: 448 DASIVSIVVDLLAKNE 463
           D+   + +++   K E
Sbjct: 569 DSITYNTLINGFVKGE 584



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 231/447 (51%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F V+  +      P   T+ ++I GLC + R + A  +F ++   G  PD  TY
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+   CR ++ + A ++F +M +     GV   P+ ++++++I    + G +D+A   
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHR----GV--SPDLISFSSLIGVSSRNGHLDQALMY 347

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              MK   + P+ V YT +I G+C     +EA  +  +M++QG   +VV +N I++ LCK
Sbjct: 348 FRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCK 407

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + +A+ L D M++ GV PD  T+ TL+ G C  G +  A  LF  M     K  + +
Sbjct: 408 KKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVT 467

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+G+CK  E+E A  L++EM+S+ I P+ + +  L  G   +  V  AF+L+DEM 
Sbjct: 468 YNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMI 527

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G+     T  T I G C++G + +A E    +       D   YN+LI+G  K   ++
Sbjct: 528 RKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMD 587

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +    L P+VVTY++++ G C  G+M +A  +   M E  + P+  T+  LI
Sbjct: 588 KAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLI 647

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G++  +   +      +M +   +PD
Sbjct: 648 NGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 223/436 (51%), Gaps = 6/436 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+ +LI   C E  + EA  +   +   G +P +FTY  ++NGLC+    + A  +F
Sbjct: 219 DIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVF 278

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM        +   P+T TY T++   C+     +AK++   M  + + P++++++S+I
Sbjct: 279 NEM------LSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI 332

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
                    ++A   F +M   G+ P+ V + ++++  C+NG M EA  + D M++ G  
Sbjct: 333 GVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCA 392

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            D   YNT+L+G C    +  A  LF  M   G      +++ LI+G+CK   +  ALSL
Sbjct: 393 LDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSL 452

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M  K IKPD+V +N L  G  +  ++E+A +L++EM    +  +  +Y   ++G C 
Sbjct: 453 FGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCN 512

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G++ EA  L+  +     +  +   N++I G C+SG L  A E    +    + P+ +T
Sbjct: 513 LGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSIT 572

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ +I G      MDKA  L   ME   + P+V+T+++++ GF R     +   +L KM 
Sbjct: 573 YNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMI 632

Query: 442 EINVMPDASIVSIVVD 457
           E  + PD S  + +++
Sbjct: 633 ERGIDPDRSTYTTLIN 648



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 224/457 (49%), Gaps = 6/457 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG V   + V   I +S    +  T   ++  LC + +I +       +   G   D+ T
Sbjct: 163 MGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVT 222

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+N  CR      A  +   M+      G   +P   TY  +I+GLCK+G   +AK 
Sbjct: 223 YNTLINAYCREGLLGEAFEVMNSMS------GKGLKPTLFTYNAVINGLCKKGRYVRAKG 276

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M    + P+  TY +++   C   ++ EAK +F +M+ +GV P++++F+ ++    
Sbjct: 277 VFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSS 336

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +NG +D+A      M   G+ PD   Y  L++G+C  G ++ A E+   M   GC   V 
Sbjct: 337 RNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVV 396

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++NG CK K +  A +L+ EM+ +G+ PD     TL  G  +   + +A  LF  M
Sbjct: 397 AYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIM 456

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +  +  D  TY   IDG CK   + +A EL++ +   K   +  +Y  L++G C  G +
Sbjct: 457 TQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFV 516

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  L+  +    + P +VT + +I G C  G + KA +    M    V P+ IT++ L
Sbjct: 517 SEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTL 576

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           I GF++     K   L++KM+   + PD    +++++
Sbjct: 577 INGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILN 613



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 166/357 (46%), Gaps = 35/357 (9%)

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +IR +  A+  NE    F  +  +G   ++   N ++  L K G +D A  + + + + G
Sbjct: 121 LIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSG 180

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           +  + +T N +++  C   +++  K   + ME  G    + +Y+ LIN YC+   +  A 
Sbjct: 181 IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAF 240

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + + M  KG+KP +  +N +  GL +  +  RA  +F+EM   G++ DT TY T +   
Sbjct: 241 EVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVES 300

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C+N   +EA ++F  +       D+ +++SLI    ++G L+ AL  FR +    LVP+ 
Sbjct: 301 CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDN 360

Query: 380 VTYSIMIGGLCNDGQMDKA---RD--------------------------------LFLD 404
           V Y+I+I G C +G M +A   RD                                LF +
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDE 420

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           M E  VVP+  TF  LI G  +     K + L   M + N+ PD    +I++D   K
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCK 477



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 148/295 (50%)

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           + F++++    +  K++E +    ++ + G        N+LL G    G V+ A E++  
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE 175

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           +   G +  V++ +I++N  CK+ +I+       +M  KGI  D+V +NTL         
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           +  AF++ + M   G+    +TY   I+GLCK G  V A  +F+ +  +    D   YN+
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           L+   C++     A ++F  +    + P+++++S +IG    +G +D+A   F DM+ + 
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           +VP+ + + +LI G+ R    S+ +E+  KM E     D    + +++ L K ++
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKL 410



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 128/260 (49%)

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D   ++ L+  +    ++N   + F  +   G   ++ + + L+ G  K   ++ A  +Y
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           +E+   GI+ +V   N +   L + H+++       +M++ G+ AD  TY T I+  C+ 
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G + EA E+ +++     +  +  YN++I+GLCK GR   A  +F  +    L P+  TY
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++   C +    +A+D+F DM    V P++I+F  LI    R     + +     MK 
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353

Query: 443 INVMPDASIVSIVVDLLAKN 462
             ++PD  I +I+++   +N
Sbjct: 354 SGLVPDNVIYTILINGYCRN 373



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G VS  F +   +++    P  VT  ++IKG C    + +A     K+   G  PD  T
Sbjct: 513 LGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSIT 572

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG  +  +   A  L  +M           +P+ VTY  I++G C++G + +A+ 
Sbjct: 573 YNTLINGFVKGEYMDKAFFLINKMETKG------LQPDVVTYNVILNGFCRQGRMQEAEL 626

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           +L +M ++ I P+  TYT++I G+    +  EA R   EM+ +G  P+
Sbjct: 627 ILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/431 (32%), Positives = 220/431 (51%), Gaps = 8/431 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           FTPD VT+ SLI G      + E   +F +++   C+PDV TY  L+N  C+      A 
Sbjct: 286 FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 345

Query: 79  NLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
               EM ANG        +PN VTY+T ID  CKEG + +A +  + M+   + PN  TY
Sbjct: 346 EFLHEMKANG-------LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTY 398

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           TS+I   C A +  EA +L  E++  G++ NVVT+  ++D LC+ G+M EA  +   M+ 
Sbjct: 399 TSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN 458

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            GV P+  TY  L+ GF     + +AK++   M+    K  +  Y  ++ G C    +E 
Sbjct: 459 AGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEE 518

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L  E+   GI  + VI+ TL    F+  Q   A  L +EM   G+ A   TY   ID
Sbjct: 519 AKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALID 578

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLCK+G + EA+  F  +  +  + ++  Y +L+DGLCK+   E+A +LF  +    ++P
Sbjct: 579 GLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMP 638

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + + Y+ +I G    G + +A +L   M E  +  ++  +  LI G     +  K   LL
Sbjct: 639 DKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL 698

Query: 438 HKMKEINVMPD 448
            +M    V+PD
Sbjct: 699 DEMIGKGVLPD 709



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 216/409 (52%), Gaps = 6/409 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   F  L  +  +   P+ VT+++ I   C E  + EA   F  +R     P+ FTYT
Sbjct: 340 RMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 399

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++  C+  +   AL L EE+     +       N VTYT ++DGLC+EG + +A+E+ 
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKL------NVVTYTALLDGLCEEGRMKEAEEVF 453

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M +  + PN  TYT+++ GF  AK+   AK +  EM ++ ++P+++ +  I+  LC  
Sbjct: 454 RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 513

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            +++EA  L+  + + G+  +A  Y TL+D +  +G+   A  L   M  +G   T  +Y
Sbjct: 514 SRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTY 573

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
             LI+G CK+  ++ A+  +  M   G++P+V ++  L  GL + +  E A KLFDEM  
Sbjct: 574 CALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLD 633

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  D   Y   IDG  K+G + EA+ L   +  +  E D+ AY +LI GL  SG+++ 
Sbjct: 634 KGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQK 693

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           A  L   +    ++P+ V Y  +I      G++D+A +L  +M +  ++
Sbjct: 694 ARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 228/463 (49%), Gaps = 41/463 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   +  +L+  L    R   +   F  +   G +  VFTY  +++ LC+     +A +L
Sbjct: 218 PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 277

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M     E G    P+ VTY ++IDG  K G +D+   +  QMKD +  P+V+TY ++
Sbjct: 278 FTQMK----EAGFT--PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNAL 331

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD-------------- 186
           I  FC  +   +A     EM   G++PNVVT++  +D  CK G +               
Sbjct: 332 INCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVAL 391

Query: 187 ---------------------EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
                                EA +L++ ++Q G++ +  TY  LLDG C  GR+  A+E
Sbjct: 392 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 451

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F +M + G      +Y+ L++G+ K KE+E A  +  EM  K IKPD++++ T+  GL 
Sbjct: 452 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLC 511

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              ++E A  L  E++ +G+  +   Y T +D   K+G   EA+ L   +  L       
Sbjct: 512 NESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEV 571

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y +LIDGLCKSG ++ A+  F  +    L PNV  Y+ ++ GLC +   + A+ LF +M
Sbjct: 572 TYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEM 631

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +  ++P+ I +  LI G ++     + + L  +M EI +  D
Sbjct: 632 LDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELD 674



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 216/442 (48%), Gaps = 6/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    F +L   L     + EA+  F K+R F   P   +   L++ L +     ++   
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F++M    G  G+  + +  TY  +ID LCKEG ++ A+ L  QMK+    P++VTY S+
Sbjct: 243 FKDM----GAAGI--KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 296

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G       +E   +F +M D    P+V+T+N +++  CK  +M +A   L  M  +G+
Sbjct: 297 IDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 356

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P+  TY+T +D FC  G +  A + FV M  +      F+Y+ LI+  CK   +  AL 
Sbjct: 357 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 416

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  E+L  GIK +VV +  L  GL E  +++ A ++F  M   GVA +  TY   + G  
Sbjct: 417 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 476

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   +  A ++   ++    + D+  Y +++ GLC   RLE A  L   +    +  N V
Sbjct: 477 KAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAV 536

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+ ++      GQ  +A  L  +M +  ++   +T+  LI G  +     + +    +M
Sbjct: 537 IYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRM 596

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
            EI + P+ ++ + +VD L KN
Sbjct: 597 SEIGLQPNVAVYTALVDGLCKN 618



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 198/376 (52%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           VC P    +  +   L + G +++A E  L+M+   + P   +  +++         + +
Sbjct: 180 VCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLS 239

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           ++ F +M   G++ +V T+N+++D LCK G ++ A  L   M + G  PD  TYN+L+DG
Sbjct: 240 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
               G ++    +F  M+   C   V +Y+ LIN +CK + +  A     EM + G+KP+
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 359

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV ++T      +   ++ A K F +M+R  +  + +TY + ID  CK G + EA++L  
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +     + ++  Y +L+DGLC+ GR++ A E+FR++    + PN  TY+ ++ G     
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           +M+ A+D+  +M+E  + P+++ +  ++ G    +   +   L+ ++KE  +  +A I +
Sbjct: 480 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 539

Query: 454 IVVDLLAKNEISLNSL 469
            ++D   K+  +  +L
Sbjct: 540 TLMDAYFKSGQATEAL 555



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 168/330 (50%), Gaps = 6/330 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++    ++  IL++    + VT+T+L+ GLC E R+ EA  +F  +   G  P+  TY
Sbjct: 409 GNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETY 468

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T LV+G  +      A ++ +EM           +P+ + Y TI+ GLC E  +++AK L
Sbjct: 469 TALVHGFIKAKEMEYAKDILKEMKEK------CIKPDLLLYGTILWGLCNESRLEEAKLL 522

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + ++K+  I  N V YT+++  +  +    EA  L  EM+D G+    VT+  ++D LCK
Sbjct: 523 IGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCK 582

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G + EA      M + G++P+   Y  L+DG C       AK+LF  M   G      +
Sbjct: 583 SGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIA 642

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G  K+  ++ AL+L   M+  G++ D+  +  L  GL    QV++A  L DEM 
Sbjct: 643 YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMI 702

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
             GV  D   Y   I      G + EA+EL
Sbjct: 703 GKGVLPDEVVYMCLIKKYYALGKVDEALEL 732



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 6/199 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +    +L  +L        VT+ +LI GLC    + EA   F ++   G +P+V  Y
Sbjct: 549 GQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVY 608

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T LV+GLC+ +   VA  LF+EM +     G++  P+ + YT +IDG  K G + +A  L
Sbjct: 609 TALVDGLCKNNCFEVAKKLFDEMLDK----GMM--PDKIAYTALIDGNMKHGNLQEALNL 662

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +  ++ ++  YT++I G  ++    +A+ L  EM+ +GV P+ V +  ++ +   
Sbjct: 663 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA 722

Query: 182 NGKMDEASRLLDLMIQHGV 200
            GK+DEA  L + M + G+
Sbjct: 723 LGKVDEALELQNEMAKRGM 741



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 2/188 (1%)

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQ--RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           N +   L  + +V  ++ +FD +   RN        +      L + G + EA E F  +
Sbjct: 152 NAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKM 211

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           R  +     R+ N+L+  L K GR +++ + F+ +    +  +V TY+IMI  LC +G +
Sbjct: 212 RKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDL 271

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           + AR LF  M+E    P+++T++ LI G  ++    + I +  +MK+ +  PD    + +
Sbjct: 272 EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNAL 331

Query: 456 VDLLAKNE 463
           ++   K E
Sbjct: 332 INCFCKFE 339


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/389 (33%), Positives = 217/389 (55%), Gaps = 6/389 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + D  +F++LI   C  SR+  A +   K+   G EP + T+ +LVNG C  +    A++
Sbjct: 105 SHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMS 164

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +++       G+  EPN V Y TIID LC+   VD A ++L  M+   I+P+V+TY S
Sbjct: 165 LVDQIV------GLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNS 218

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I    ++  W  + R+  +MM  G+ P+V+TF+ ++D   K G++ EA +  D MIQ  
Sbjct: 219 LITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRS 278

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V P+  TYN+L++G C+ G ++ AK++   M S G      +Y+ L+NGYCK+K ++ A+
Sbjct: 279 VDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAM 338

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +   M   G+  D   +NTL+ G  +  Q   A K+   M   GV  D +T+   +DGL
Sbjct: 339 KILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGL 398

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C++G I +A+     L+  +    I  YN +I G+CK+ ++E A  LF SL    + P+V
Sbjct: 399 CEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDV 458

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +TY+ M+ GL       +A +L+  M+++
Sbjct: 459 ITYTTMMIGLRRKRLWLEAHELYRKMKKD 487



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 198/368 (53%), Gaps = 6/368 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S     LG+++K  F P  VTF SL+ G C  +RI EA +L  ++   G EP+V  Y 
Sbjct: 123 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYN 182

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+++ LC       AL++   M     + G+   P+ +TY ++I  L   G    +  +L
Sbjct: 183 TIIDSLCENRQVDTALDVLNHME----KMGI--RPDVITYNSLITRLFHSGKWGVSARIL 236

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M    I P+V+T++++I  F       EAK+ + EM+ + V PN+VT+N +++ LC +
Sbjct: 237 SDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIH 296

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +DEA ++L+ M+  G  P+A TYNTL++G+C + RV+ A ++   M   G     F+Y
Sbjct: 297 GLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTY 356

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + L  GYC+  +   A  + + M+S G+ PD+   N L  GL E  ++E+A    +++Q+
Sbjct: 357 NTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQK 416

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +       TY   I G+CK   + +A  LF +L +     D+  Y +++ GL +      
Sbjct: 417 SETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLE 476

Query: 363 ALELFRSL 370
           A EL+R +
Sbjct: 477 AHELYRKM 484



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 227/430 (52%), Gaps = 11/430 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  V F+ L+  +    +     +LF  + + G   D+++++TL++  CR S   +AL+ 
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M     + G   EP+ VT+ ++++G C    + +A  L+ Q+     +PNVV Y ++
Sbjct: 131 LGKMM----KLGF--EPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTI 184

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  +  + A  +   M   G++P+V+T+N ++  L  +GK   ++R+L  M++ G+
Sbjct: 185 IDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGI 244

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T++ ++D F   G++  AK+ +  M        + +Y+ LING C +  ++ A  
Sbjct: 245 HPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKK 304

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + + M+SKG  P+ V +NTL  G  +  +V+ A K+   M  +GV  DT+TY T   G C
Sbjct: 305 VLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYC 364

Query: 321 KNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           + G    A ++    R++ C    DI  +N L+DGLC+ G++E AL     L     V  
Sbjct: 365 QAGQFNAAEKVLA--RMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVG 422

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           ++TY+I+I G+C   +++ A  LF  +    V P+VIT+  ++ G  R     +  EL  
Sbjct: 423 IITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYR 482

Query: 439 KMKEIN-VMP 447
           KMK+ + +MP
Sbjct: 483 KMKKDDGLMP 492



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 193/349 (55%), Gaps = 2/349 (0%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           +++T+ID  C+   +  A   L +M     +P++VT+ S++ GFC+     EA  L  ++
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +  G +PNVV +N I+D LC+N ++D A  +L+ M + G+RPD  TYN+L+     +G+ 
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW 229

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             +  +   M  MG    V ++S +I+ + K  ++  A   Y EM+ + + P++V +N+L
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL     ++ A K+ + M   G   +  TY T ++G CK+  + +A+++   +     
Sbjct: 290 INGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALE-LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           + D   YN+L  G C++G+   A + L R + CGVL P++ T+++++ GLC  G+++KA 
Sbjct: 350 DGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVL-PDIYTFNMLLDGLCEHGKIEKAL 408

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               D++++  V  +IT++++I+G  + N+      L   +    V PD
Sbjct: 409 VKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPD 457



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 175/347 (50%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           + A  L   M +    P++V ++ ++      K +     LF  +   G+  ++ +F+ +
Sbjct: 55  NDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTL 114

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D  C+  ++  A   L  M++ G  P   T+ +L++GFC   R+  A  L   +  +G 
Sbjct: 115 IDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGY 174

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V  Y+ +I+  C+N++++ AL + + M   GI+PDV+ +N+L   LF   +   + +
Sbjct: 175 EPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSAR 234

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +  +M R G+  D  T+   ID   K G ++EA + +  +     + +I  YNSLI+GLC
Sbjct: 235 ILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLC 294

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             G L+ A ++   +      PN VTY+ ++ G C   ++D A  +   M  + V  +  
Sbjct: 295 IHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTF 354

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T++ L +G+ +  + +   ++L +M    V+PD    ++++D L ++
Sbjct: 355 TYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEH 401



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 159/312 (50%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y   +R   ++  +N+A  LF +M +    P++V F+ ++  + K  K +    L   + 
Sbjct: 41  YRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+  D ++++TL+D FC   R++ A      M  +G + ++ ++  L+NG+C    I+
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+SL  +++  G +P+VVI+NT+   L E  QV+ A  + + M++ G+  D  TY + I
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
             L  +G    +  +   +  +    D+  ++++ID   K G+L  A + +  +    + 
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD 280

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN+VTY+ +I GLC  G +D+A+ +   M      PN +T++ L+ G+ +       +++
Sbjct: 281 PNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKI 340

Query: 437 LHKMKEINVMPD 448
           L  M    V  D
Sbjct: 341 LCVMSHDGVDGD 352



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 47/88 (53%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++    V L  + KS      +T+  +IKG+C  +++ +A  LF  L + G  PDV TY
Sbjct: 402 GKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITY 461

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG 89
           TT++ GL R    + A  L+ +M   +G
Sbjct: 462 TTMMIGLRRKRLWLEAHELYRKMKKDDG 489


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 225/428 (52%), Gaps = 10/428 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDV 58
           MG +     + G ++     P++VT  S+I+G C   ++ +A  +  ++  R F   P  
Sbjct: 364 MGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA 423

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           F  TT+++ LC  S    AL    EM   N        PN    TT++ GLCKEG    A
Sbjct: 424 F--TTIIHWLCMNSRFESALRFLREMLLRN------MRPNDGLLTTLVGGLCKEGKHSDA 475

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            EL  ++ +K    N+VT  ++I G C   +  EA RL  +M+++G   + +T+N ++  
Sbjct: 476 VELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 535

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            CK GK++E  +L   M++ G+ PD FTYN L+ G C  G+++ A  L+   +S      
Sbjct: 536 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 595

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V++Y ++I+GYCK  +IE    L++E+L++ ++ + V++NTL            AFKL D
Sbjct: 596 VYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHD 655

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M+  G+   T TY + I G+C  G + +A  L   +R      ++  Y +LI G CK G
Sbjct: 656 DMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLG 715

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           +++  + + + +    + PN +TY++MI G    G M  A  L  +M    +VP+ +T++
Sbjct: 716 QMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYN 775

Query: 419 MLIRGFIR 426
           +L  GF +
Sbjct: 776 VLTNGFCK 783



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 232/452 (51%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL   L+  FTP+ V + +LI G C    + +A  +   +   G  P+  T  +++ G C
Sbjct: 338 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 397

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  + EEM +    F +    N   +TTII  LC     + A   L +M  +N
Sbjct: 398 KIGQMEQAECILEEMLSRG--FSI----NPGAFTTIIHWLCMNSRFESALRFLREMLLRN 451

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           ++PN    T+++ G C     ++A  L+  ++++G   N+VT N ++  LCK G M EA 
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           RLL  M++ G   D  TYNTL+ G C  G+V    +L   M   G +   F+Y++LI+G 
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+  +++ A++L++E  S+ + P+V  +  +  G  +  ++E   KLF E+    +  ++
Sbjct: 572 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 631

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y T I   C+NG  VEA +L   +R          Y+SLI G+C  GR+E A  L   
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 691

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    L+PNVV Y+ +IGG C  GQMDK  ++  +M    + PN IT+ ++I G+ +  +
Sbjct: 692 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 751

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                +LLH+M    ++PD    +++ +   K
Sbjct: 752 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 783



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 239/512 (46%), Gaps = 64/512 (12%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           ++   +PD   F++ I   C   ++ +A  LF  +   G  P+V TY  L++GLC+  + 
Sbjct: 238 MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 297

Query: 75  IVALNLFEEMA---------------NG-------NGEFGVVCE-------PNTVTYTTI 105
             A    E+M                NG       N    V+ E       PN V Y T+
Sbjct: 298 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 357

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           IDG CK G +  A  +   M  K I PN VT  S+I+GFC      +A+ +  EM+ +G 
Sbjct: 358 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 417

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
             N   F  I+  LC N + + A R L  M+   +RP+     TL+ G C  G+ + A E
Sbjct: 418 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 477

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L+  +   G    + + + LI+G CK   ++ A+ L  +ML +G   D + +NTL  G  
Sbjct: 478 LWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCC 537

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +  +VE  FKL  EM + G+  DT+TY   I G+C+ G + EAV L++  +      ++ 
Sbjct: 538 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 597

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVL------------------------------ 375
            Y  +IDG CK+ ++E   +LF  L    L                              
Sbjct: 598 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 657

Query: 376 -----VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                 P   TYS +I G+CN G+M+ A+ L  +M +  ++PNV+ +  LI G+ ++ + 
Sbjct: 658 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 717

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            KV+ +L +M   ++ P+    ++++D  +K+
Sbjct: 718 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKS 749



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 237/456 (51%), Gaps = 10/456 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T T L+  L   + + ++  +F  +R  G  PDV+ ++T +N  C+      A+ L
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 268

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M     + GV   PN VTY  +I GLCK G +D+A     +M    +   ++TY+ +
Sbjct: 269 FFDME----KLGV--SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVL 322

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G    + +NEA  +  E +++G  PN V +N ++D  CK G + +A R+   M+  G+
Sbjct: 323 INGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 382

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P++ T N+++ GFC  G++  A+ +   M S G      +++ +I+  C N   E AL 
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 442

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
              EML + ++P+  +  TL  GL +  +   A +L+  +   G  A+  T    I GLC
Sbjct: 443 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 502

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + EAV L   +       D   YN+LI G CK G++E   +L   +    + P+  
Sbjct: 503 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 562

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+++I G+C  G++D+A +L+ + +   +VPNV T+ ++I G+ + ++  +  +L  ++
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
              N+  ++ + + ++    +N    N++ +F +H+
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNG---NTVEAFKLHD 655



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 175/359 (48%), Gaps = 6/359 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S    +  R+L+  F  + VT  +LI GLC    + EA  L  K+   G   D  TY
Sbjct: 470 GKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITY 529

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+         L  EM           EP+T TY  +I G+C+ G +D+A  L
Sbjct: 530 NTLISGCCKEGKVEEGFKLRGEMVKQG------IEPDTFTYNLLIHGMCRIGKLDEAVNL 583

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + K +++ PNV TY  +I G+C A    E ++LF E++ Q ++ N V +N ++   C+
Sbjct: 584 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 643

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG   EA +L D M   G+ P   TY++L+ G C  GR+  AK L   M   G    V  
Sbjct: 644 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 703

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI GYCK  +++  +++  EM S  I P+ + +  +  G  +   ++ A KL  EM 
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 763

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             G+  DT TY    +G CK G I E  ++   +       D   Y +L+ G  +   L
Sbjct: 764 GKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 36/322 (11%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F  + ++GV P V T   ++  L K  +++++  + + M Q GV PD + ++T ++ FC
Sbjct: 199 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFC 257

Query: 216 LTGRVNHAKELFVSMESMG---------------CKH--------------------TVF 240
             G+V  A +LF  ME +G               CKH                    T+ 
Sbjct: 258 KGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLI 317

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS+LING  K ++   A S+  E L KG  P+ V++NTL  G  ++  +  A ++  +M
Sbjct: 318 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 377

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  ++ T  + I G CK G + +A  +   +       +  A+ ++I  LC + R 
Sbjct: 378 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 437

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E AL   R +    + PN    + ++GGLC +G+   A +L+  + E     N++T + L
Sbjct: 438 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL 497

Query: 421 IRGFIRINEPSKVIELLHKMKE 442
           I G  +     + + LL KM E
Sbjct: 498 IHGLCKTGNMQEAVRLLKKMLE 519


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 225/448 (50%), Gaps = 12/448 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+S     L  +++  +  D  T T +I     +  +  A   F K    G  P++  
Sbjct: 241 MGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLIN 300

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +++L+NGLC+      A  + EEM     +      PN  T+T +IDGLCK+G+ +KA  
Sbjct: 301 FSSLINGLCKIGSIKQAFEMLEEMVRKGWK------PNVYTHTALIDGLCKKGWTEKAFR 354

Query: 121 LLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L L++ +  N KPNV TYT +I G+C  +  N A+ L I M +QG+ PN  T+  ++D  
Sbjct: 355 LFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGH 414

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G    A  L+DLM + G  P+ FTYN ++DG C  GR   A +L       G     
Sbjct: 415 CKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADK 474

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ILI+ +C+  + + AL+++S M   G++PD+  +N L        +VE + KLF+E
Sbjct: 475 VTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEE 534

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
               G+     TY + I G C++G+I  A++ FH +R   C+ D   Y +LI GLC   +
Sbjct: 535 AVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESK 594

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A +L+ ++    L P  VT   +    C  G    A  +   +E+   +  V T   
Sbjct: 595 LDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNT--- 651

Query: 420 LIRGFIRINEPSKVIELLHKM--KEINV 445
           LIR      +        HK+  K++NV
Sbjct: 652 LIRKLCSEKKVGVAALFFHKLLDKDLNV 679



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 203/444 (45%), Gaps = 18/444 (4%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           +HG V+  RIL   F  D       +           A  +F ++      PD  +Y  +
Sbjct: 186 NHGLVLKARILN--FVIDVALALGFVD---------YAEKVFDEMLDRAVVPDSTSYKLM 234

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V G CR           ++M     E G   +    T T +I    ++GFV++A     +
Sbjct: 235 VVGYCRMGRISDVDRWLKDMI----ERGYAVD--NATCTLMISTFSEKGFVNRAFWYFKK 288

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
                + PN++ ++S+I G C      +A  +  EM+ +G +PNV T   ++D LCK G 
Sbjct: 289 WVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGW 348

Query: 185 MDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            ++A RL L L+     +P+ +TY  +++G+C   ++N A+ L + M+  G      +Y+
Sbjct: 349 TEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYT 408

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G+CK      A  L   M  +G  P++  +N +  GL +  +   A+KL     ++
Sbjct: 409 CLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKS 468

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+ AD  TY   I   C+     +A+ +F  +  +  + D+  YN LI   C+  ++E +
Sbjct: 469 GLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEES 528

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            +LF       L+P   TY+ MI G C DG +  A   F  M +    P+ IT+  LI G
Sbjct: 529 EKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISG 588

Query: 424 FIRINEPSKVIELLHKMKEINVMP 447
               ++  +  +L   M +  + P
Sbjct: 589 LCNESKLDEACQLYETMIDNGLSP 612



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 177/356 (49%), Gaps = 5/356 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P++ +Y  ++ G C+ G +      L  M ++    +  T T +I  F      N A   
Sbjct: 226 PDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWY 285

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F + +  G+ PN++ F+ +++ LCK G + +A  +L+ M++ G +P+ +T+  L+DG C 
Sbjct: 286 FKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCK 345

Query: 217 TGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
            G    A  LF+ +  S   K  V++Y+ +INGYCK +++  A  L   M  +G+ P+  
Sbjct: 346 KGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTN 405

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +  L  G  +     RA++L D M + G   + +TY   IDGLCK G   EA +L    
Sbjct: 406 TYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR-- 463

Query: 336 RILKCEF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
           R LK     D   Y  LI   C+    + AL +F  +    L P++ TY+++I   C   
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           +++++  LF +     ++P   T+  +I G+ R    S  I+  HKM++    PD+
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDS 579



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 154/312 (49%), Gaps = 1/312 (0%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+++F EM+D+ V P+  ++ +++   C+ G++ +  R L  MI+ G   D  T   ++ 
Sbjct: 212 AEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIS 271

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
            F   G VN A   F     MG    + ++S LING CK   I+ A  +  EM+ KG KP
Sbjct: 272 TFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKP 331

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQR-NGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           +V  H  L  GL +    E+AF+LF ++ R +    + +TY   I+G CK   +  A  L
Sbjct: 332 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEML 391

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
              ++      +   Y  LIDG CK+G    A EL   +      PN+ TY+ +I GLC 
Sbjct: 392 LIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCK 451

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G+  +A  L     ++ +  + +T+ +LI  F R  +  + + +  +M ++ + PD   
Sbjct: 452 KGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHT 511

Query: 452 VSIVVDLLAKNE 463
            ++++    + +
Sbjct: 512 YNVLIATFCRQK 523



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 160/335 (47%), Gaps = 1/335 (0%)

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++R F       EA  + IEM + G+       N ++D     G +D A ++ D M+   
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V PD+ +Y  ++ G+C  GR++        M   G      + +++I+ + +   +  A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             + + +  G+ P+++  ++L  GL +I  +++AF++ +EM R G   + +T+   IDGL
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 320 CKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           CK G+  +A  LF  L R    + ++  Y  +I+G CK  +L  A  L   +    LVPN
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
             TY+ +I G C  G   +A +L   M +    PN+ T++ +I G  +     +  +LL 
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           +  +  +  D    +I++    +   +  +L  F+
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFS 498



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 64/158 (40%), Gaps = 33/158 (20%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T+TS+I G C +  I  A   F K+R +GC+PD  TY  L++GLC  S    A  L
Sbjct: 542 PTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQL 601

Query: 81  FEEMANGNGEFGVVCEPNTVTYT-----------------------------TIIDGLCK 111
           +E M + NG     CE   VT                               T+I  LC 
Sbjct: 602 YETMID-NGL--SPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCS 658

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
           E  V  A     ++ DK++  + +T  +     CY  +
Sbjct: 659 EKKVGVAALFFHKLLDKDLNVDRITLAAFTTA-CYESN 695


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 217/408 (53%), Gaps = 6/408 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           KS    D  +F  LIKG C    I ++  L  +L  FG  P+V  YTTL++G C+     
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A +LF EM    G+ G+V   N  TYT +I+GL K G   +  E+  +M++  + PN+ 
Sbjct: 216 KAKDLFFEM----GKLGLVA--NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY  V+   C      +A ++F EM ++GV  N+VT+N ++  LC+  K++EA++++D M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ P+  TYNTL+DGFC  G++  A  L   ++S G   ++ +Y+IL++G+C+  + 
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
            GA  +  EM  +GIKP  V +  L         +E+A +L   M+  G+  D  TY   
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I G C  G + EA  LF ++    CE +   YN++I G CK G    AL+L + +    L
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            PNV +Y  MI  LC + +  +A  L   M ++ + P+     ++ R 
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 232/452 (51%), Gaps = 13/452 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFT--KLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           F P +  F  L+  +   S   +  + F   K +V     DV+++  L+ G C       
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVV---LDVYSFGILIKGCCEAGEIEK 181

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           + +L  E+     EFG    PN V YTT+IDG CK+G ++KAK+L  +M    +  N  T
Sbjct: 182 SFDLLIELT----EFGF--SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           YT +I G        +   ++ +M + GV PN+ T+N +M++LCK+G+  +A ++ D M 
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + GV  +  TYNTL+ G C   ++N A ++   M+S G    + +Y+ LI+G+C   ++ 
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            ALSL  ++ S+G+ P +V +N L  G         A K+  EM+  G+     TY   I
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D   ++  + +A++L  ++  L    D+  Y+ LI G C  G++  A  LF+S+      
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN V Y+ MI G C +G   +A  L  +MEE  + PNV ++  +I    +  +  +   L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           + KM +  + P  SI+S++    AKN+  ++S
Sbjct: 536 VEKMIDSGIDPSTSILSLISR--AKNDSHVSS 565



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 187/369 (50%), Gaps = 41/369 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  + +  F+P+ V +T+LI G C +  I +A  LF ++   G   +  TY
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236

Query: 62  TTLVNG-----------------------------------LCRTSHTIVALNLFEEMAN 86
           T L+NG                                   LC+   T  A  +F+EM  
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR- 295

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
              E GV C  N VTY T+I GLC+E  +++A +++ QMK   I PN++TY ++I GFC 
Sbjct: 296 ---ERGVSC--NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
                +A  L  ++  +G+ P++VT+N+++   C+ G    A++++  M + G++P   T
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  L+D F  +  +  A +L +SME +G    V +YS+LI+G+C   ++  A  L+  M+
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            K  +P+ VI+NT+ +G  +     RA KL  EM+   +A +  +YR  I+ LCK     
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530

Query: 327 EAVELFHTL 335
           EA  L   +
Sbjct: 531 EAERLVEKM 539



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 183/355 (51%), Gaps = 1/355 (0%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  II+   +   ++ +     +M D    P    +  ++     +  +N+    F E  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            + V  +V +F +++   C+ G+++++  LL  + + G  P+   Y TL+DG C  G + 
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            AK+LF  M  +G      +Y++LING  KN   +    +Y +M   G+ P++  +N + 
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L +  + + AF++FDEM+  GV+ +  TY T I GLC+   + EA ++   ++     
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  YN+LIDG C  G+L  AL L R L    L P++VTY+I++ G C  G    A  +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
             +MEE  + P+ +T+ +LI  F R +   K I+L   M+E+ ++PD    S+++
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 205/419 (48%), Gaps = 7/419 (1%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  ++N   ++    ++++ F EM +     G V  P +  +  ++  +      ++   
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDN----GFV--PGSNCFNYLLTFVVGSSSFNQWWS 150

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              + K K +  +V ++  +I+G C A +  ++  L IE+ + G  PNVV +  ++D  C
Sbjct: 151 FFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++++A  L   M + G+  +  TY  L++G    G      E++  M+  G    ++
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++N  CK+   + A  ++ EM  +G+  ++V +NTL  GL    ++  A K+ D+M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           + +G+  +  TY T IDG C  G + +A+ L   L+       +  YN L+ G C+ G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A ++ + +    + P+ VTY+I+I        M+KA  L L MEE  +VP+V T+ +L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           I GF    + ++   L   M E N  P+  I + ++    K   S  +L      E++E
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 145/275 (52%), Gaps = 6/275 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR    F V   + +   + + VT+ +LI GLC E ++ EA  +  +++  G  P++ TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C       AL+L  ++ +          P+ VTY  ++ G C++G    A ++
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRG------LSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+++ IKP+ VTYT +I  F  + +  +A +L + M + G+ P+V T++V++   C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+M+EASRL   M++    P+   YNT++ G+C  G    A +L   ME       V S
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           Y  +I   CK ++ + A  L  +M+  GI P   I
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 21/247 (8%)

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +HT  S SIL+           A SL  +++S  I       ++L   L E    +  F+
Sbjct: 36  QHTHESISILLRLLLSGNLFSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFR 95

Query: 296 LFDEMQRNGVAADTWTYR-TFIDGLCKNGYIVEAVELFHTLRIL---------------- 338
           L++ +  + V + +     ++ + +  NG+ V     F+ L                   
Sbjct: 96  LYEVIINSYVQSQSLNLSISYFNEMVDNGF-VPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154

Query: 339 ---KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
              K   D+ ++  LI G C++G +E + +L   L      PNVV Y+ +I G C  G++
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           +KA+DLF +M +  +V N  T+ +LI G  +     +  E+  KM+E  V P+    + V
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 456 VDLLAKN 462
           ++ L K+
Sbjct: 275 MNQLCKD 281


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 224/436 (51%), Gaps = 6/436 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+ +    P+  TF  +I  LC +  ++EA ALF +++  GC PDV TY +L++G  +  
Sbjct: 189 RLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 248

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
                  L  EM          C  + VTY  +I+   K G+++KA     +MK   +  
Sbjct: 249 ELEEVELLVSEMRKSG------CAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMA 302

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           NVVT ++ +  FC      EA +LF +M  +G+ PN  T+  ++D  CK G++D+A  LL
Sbjct: 303 NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 362

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M+  G+ P+  TY  ++DG C  G+V  A ++   ME  G K     Y+ LI+G+  N
Sbjct: 363 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMN 422

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           K  E AL L +EM +KG++ DV ++ TL  GL ++ +++ A  L  +M   G+  +T  Y
Sbjct: 423 KNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIY 482

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T +D   K G   EAV L H +     + ++  Y +LIDGLCK+G +  A+  F  +  
Sbjct: 483 TTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRE 542

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L PNV  Y+ +I G C  G + KA  L  +M +  +  + + +  LI G ++  +   
Sbjct: 543 LGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQG 602

Query: 433 VIELLHKMKEINVMPD 448
              L  KM E  +  D
Sbjct: 603 AFALKAKMIETGLQLD 618



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 210/404 (51%), Gaps = 10/404 (2%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+VFT+  +++ LC+    + A  LF  M        + C P+ VTY ++IDG  K G +
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMK------AMGCSPDVVTYNSLIDGYGKCGEL 250

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK-DWNE-AKRLFIEMMDQGVQPNVVTFN 173
           ++ + L+ +M+      +VVTY ++I   C++K  W E A   F EM   GV  NVVT +
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALIN--CFSKFGWIEKAYSYFGEMKRLGVMANVVTLS 308

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
             +D  CK G + EA +L   M   G+ P+ FTY +L+DG C  GR++ A  L   M   
Sbjct: 309 TFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 368

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G    V +Y+++++G CK  ++  A  + S M   G+K + +++ TL  G F     ERA
Sbjct: 369 GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERA 428

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             L +EM+  G+  D   Y T I GLCK   + EA  L H +       +   Y +++D 
Sbjct: 429 LDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDA 488

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
             K+G+   A+ L   +P   L PNVVTY  +I GLC  G + +A   F  M E  + PN
Sbjct: 489 FFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPN 548

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           V  +  LI GF +I   SK + L+++M +  +  D  + + ++D
Sbjct: 549 VQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLID 592



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 203/406 (50%), Gaps = 6/406 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   +   G + +     + VT ++ +   C E  + EA  LF ++RV G  P+ FTY
Sbjct: 283 GWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTY 342

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+LV+G C+      A+ L +EM +     G+V  PN VTYT ++DGLCKEG V  A ++
Sbjct: 343 TSLVDGTCKAGRLDDAIVLLDEMVHQ----GLV--PNVVTYTVMVDGLCKEGKVAVADDV 396

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+   +K N + YT++I G    K+   A  L  EM ++G++ +V  +  ++  LCK
Sbjct: 397 LSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCK 456

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+DEA  LL  M   G+RP+   Y T++D F   G+ + A  L   +   G +  V +
Sbjct: 457 VQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVT 516

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LI+G CK   I  A+S + +M   G+ P+V ++ TL  G  +I  + +A  L +EM 
Sbjct: 517 YCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMV 576

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G++ D   Y + IDG  K G +  A  L   +     + D+  Y   I G C    ++
Sbjct: 577 DKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQ 636

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            A  +   +    + P+   Y+ +I      G M++A  L  +ME 
Sbjct: 637 EARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 109/213 (51%), Gaps = 6/213 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V +T+++       +  EA AL  K+   G +P+V TY  L++GLC+      A++ 
Sbjct: 477 PNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISH 536

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F++M     E G+  +PN   YTT+IDG CK G + KA  L+ +M DK +  + V YTS+
Sbjct: 537 FDKMR----ELGL--DPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSL 590

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G     D   A  L  +M++ G+Q ++  +   +   C    M EA  +L  MI  G+
Sbjct: 591 IDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 650

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            PD   YN L+  +   G +  A  L   MES+
Sbjct: 651 TPDKTAYNCLIRKYQKLGNMEEASSLQNEMESV 683



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 6/126 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +S    ++  ++    + D V +TSLI G   +  +  A AL  K+   G + D++ 
Sbjct: 562 IGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYC 621

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT  ++G C  +    A  +  EM       G    P+   Y  +I    K G +++A  
Sbjct: 622 YTCFISGFCNMNMMQEARGVLSEM------IGTGITPDKTAYNCLIRKYQKLGNMEEASS 675

Query: 121 LLLQMK 126
           L  +M+
Sbjct: 676 LQNEME 681


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 240/463 (51%), Gaps = 6/463 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +L  +    +TPD +++++++ G C    + +   L   ++  G +P+ + 
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +++  LCR      A   F EM       G++  P+TV YTT+IDG CK G +  A +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQ----GIL--PDTVVYTTLIDGFCKRGDIRAASK 372

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M  ++I P+V+TYT++I GFC   D  EA +LF EM  +G++P+ VTF  +++  C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G M +A R+ + MIQ G  P+  TY TL+DG C  G ++ A EL   M  +G +  +F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++NG CK+  IE A+ L  E  + G+  D V + TL     +  ++++A ++  EM
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     T+   ++G C +G + +  +L + +       +   +NSL+   C    L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +++ +    + P+  TY  ++ G C    M +A  LF +M+      +V T+ +L
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           I+GF++  +  +  E+  +M+   +  D  I     D   K +
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 220/451 (48%), Gaps = 6/451 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           +  ++  +I  +C   RI EA  L   + + G  PDV +Y+T+VNG CR         L 
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           E M           +PN+  Y +II  LC+   + +A+E   +M  + I P+ V YT++I
Sbjct: 305 EVMKRKG------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GFC   D   A + F EM  + + P+V+T+  I+   C+ G M EA +L   M   G+ 
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD+ T+  L++G+C  G +  A  +   M   GC   V +Y+ LI+G CK  +++ A  L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM   G++P++  +N++  GL +   +E A KL  E +  G+ ADT TY T +D  CK
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           +G + +A E+   +     +  I  +N L++G C  G LE   +L   +    + PN  T
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           ++ ++   C    +  A  ++ DM    V P+  T++ L++G  +     +   L  +MK
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658

Query: 442 EINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
                   S  S+++    K +  L +   F
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 224/422 (53%), Gaps = 13/422 (3%)

Query: 39  IMEAAALFTKLRVFGCEPDVFT---YTTLVNGLC-RTSHTIVALNLFEEMANGNGEFGVV 94
           + EA  +F K+  +G    V +   Y T ++  C +T+  I+    F E+         V
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVG--------V 242

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C  N  +Y  +I  +C+ G + +A  LLL M+ K   P+V++Y++V+ G+C   + ++  
Sbjct: 243 CW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +L   M  +G++PN   +  I+  LC+  K+ EA      MI+ G+ PD   Y TL+DGF
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G +  A + F  M S      V +Y+ +I+G+C+  ++  A  L+ EM  KG++PD 
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V    L  G  +   ++ AF++ + M + G + +  TY T IDGLCK G +  A EL H 
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +  +  + +I  YNS+++GLCKSG +E A++L        L  + VTY+ ++   C  G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           MDKA+++  +M    + P ++TF++L+ GF          +LL+ M    + P+A+  + 
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601

Query: 455 VV 456
           +V
Sbjct: 602 LV 603



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 162/307 (52%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F E  + GV  NV ++N+++  +C+ G++ EA  LL LM   G  PD  +Y+T+++G+C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G ++   +L   M+  G K   + Y  +I   C+  ++  A   +SEM+ +GI PD V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           ++ TL  G  +   +  A K F EM    +  D  TY   I G C+ G +VEA +LFH +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                E D   +  LI+G CK+G ++ A  +   +      PNVVTY+ +I GLC +G +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           D A +L  +M +  + PN+ T++ ++ G  +     + ++L+ + +   +  D    + +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532

Query: 456 VDLLAKN 462
           +D   K+
Sbjct: 533 MDAYCKS 539



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 8/198 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L  +L     P  VTF  L+ G C    + +   L   +   G  P+  T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            +LV   C  ++   A  ++++M + G G       P+  TY  ++ G CK   + +A  
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKGHCKARNMKEAWF 652

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +MK K    +V TY+ +I+GF   K + EA+ +F +M  +G+  +   F+   D   
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 712

Query: 181 KNGKMDEASRLLDLMIQH 198
           K  + D     +D +I++
Sbjct: 713 KGKRPDTIVDPIDEIIEN 730



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 1/157 (0%)

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS-GRLEIAL 364
            +D   +  F   L   G + EA  +F  +        + + N  +  L K   +   A+
Sbjct: 172 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAI 231

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            +FR  P   +  NV +Y+I+I  +C  G++ +A  L L ME     P+VI++  ++ G+
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            R  E  KV +L+  MK   + P++ I   ++ LL +
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 237/454 (52%), Gaps = 11/454 (2%)

Query: 13  RILKS---CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           R+LKS   C + +A    SL+ GL     +  A  ++ ++   G + +V+T   ++N LC
Sbjct: 51  RVLKSKGLCVSINACN--SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALC 108

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +        +   +M     E GV   P+ VTY T+I+  C++G +++A EL+  M  K 
Sbjct: 109 KNQKIENTKSFLSDME----EKGVF--PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +KP V TY ++I G C    +  AK +  EM+  G+ P+  T+N+++ E C+N  M +A 
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 222

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           R+ D M   GV PD  +++ L+      G ++ A + F  M++ G       Y+ILI G+
Sbjct: 223 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+N  +  AL +  EML +G   DVV +NT+  GL +   +  A +LF EM   GV  D 
Sbjct: 283 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 342

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +T+ T I+G  K+G + +AV LF  +     + D+  YN+LIDG CK   +E   EL+  
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 402

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + PN ++Y I+I G CN G + +A  L+ +M E      +IT + +++G+ R   
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 462

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             K  E L  M    ++PD    + +++   K E
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 496



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 230/447 (51%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++  +      P   T+ ++I GLC   + + A  +  ++   G  PD  TY
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+   CR  + + A  +F+EM +     GVV  P+ V+++ +I  L K G +D+A + 
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQ----GVV--PDLVSFSALIGLLSKNGCLDQALKY 259

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              MK+  + P+ V YT +I GFC     +EA ++  EM++QG   +VVT+N I++ LCK
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 319

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + EA  L   M + GV PD +T+ TL++G+   G +N A  LF  M     K  V +
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 379

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+CK  E+E    L+++M+S+ I P+ + +  L  G   +  V  AF+L+DEM 
Sbjct: 380 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 439

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G  A   T  T + G C+ G  V+A E    + +     D   YN+LI+G  K   ++
Sbjct: 440 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 499

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +    L+P+V+TY++++ G    G+M +A  + L M E  V P+  T+  LI
Sbjct: 500 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G +  N   +   +  +M +   +PD
Sbjct: 560 NGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 245/458 (53%), Gaps = 11/458 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ +LI   C +  + EA  L   +   G +P VFTY  ++NGLC+T   + A  +
Sbjct: 130 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 189

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM        +   P+T TY  ++   C+   +  A+ +  +M  + + P++V+++++
Sbjct: 190 LDEM------LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL 243

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I         ++A + F +M + G+ P+ V + +++   C+NG M EA ++ D M++ G 
Sbjct: 244 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 303

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D  TYNT+L+G C    ++ A ELF  M   G     ++++ LINGY K+  +  A++
Sbjct: 304 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 363

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+  M+ + +KPDVV +NTL  G  +  ++E+  +L+++M    +  +  +Y   I+G C
Sbjct: 364 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 423

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G + EA  L+  +     E  I   N+++ G C++G    A E   ++    +VP+ +
Sbjct: 424 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 483

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I G   +  MD+A  L   ME + ++P+VIT+++++ GF R     +   ++ KM
Sbjct: 484 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 543

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLP-SFTVHEQ 477
            E  V PD S  + +++      ++ N+L  +F VH++
Sbjct: 544 IERGVNPDRSTYTSLIN----GHVTQNNLKEAFRVHDE 577



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 183/367 (49%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C  N + +  ++    +   + +  E    +K K +  ++    S++ G       + A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            ++ E++  GVQ NV T N++++ LCKN K++     L  M + GV PD  TYNTL++ +
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G +  A EL  SM   G K  VF+Y+ +ING CK  +   A  +  EML  G+ PD 
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +N L V       +  A ++FDEM   GV  D  ++   I  L KNG + +A++ F  
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           ++      D   Y  LI G C++G +  AL++   +     V +VVTY+ ++ GLC +  
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           + +A +LF +M E  V P+  TF  LI G+ +    +K + L   M + N+ PD    + 
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382

Query: 455 VVDLLAK 461
           ++D   K
Sbjct: 383 LIDGFCK 389



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 171/334 (51%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N   N + +  ++R +  A+   E    F  +  +G+  ++   N ++  L K G +D A
Sbjct: 22  NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             +   +++ GV+ + +T N +++  C   ++ + K     ME  G    V +Y+ LIN 
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           YC+   +E A  L   M  KG+KP V  +N +  GL +  +  RA  + DEM + G++ D
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T TY   +   C+N  +++A  +F  +       D+ ++++LI  L K+G L+ AL+ FR
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L P+ V Y+I+IGG C +G M +A  +  +M E   V +V+T++ ++ G  +  
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 321

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             S+  EL  +M E  V PD    + +++  +K+
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 355



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N + F++++    +  K+ E      ++   G+       N+LL G    G V+ A E++
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             +   G +  V++ +I+IN  CKN++IE   S  S+M  KG+ PDVV +NTL       
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             +E AF+L D M   G+    +TY   I+GLCK G  + A  +   +  +    D   Y
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N L+   C++  +  A  +F  +P   +VP++V++S +IG L  +G +D+A   F DM+ 
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             + P+ + + +LI GF R    S+ +++  +M E   + D    + +++ L K ++
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 89/168 (52%), Gaps = 6/168 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG VS  F +   +++  F    +T  +++KG C     ++A    + + + G  PD  T
Sbjct: 425 MGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 484

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG  +  +   A  L  +M N     G++  P+ +TY  I++G  ++G + +A+ 
Sbjct: 485 YNTLINGFIKEENMDRAFALVNKMENS----GLL--PDVITYNVILNGFSRQGRMQEAEL 538

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           ++L+M ++ + P+  TYTS+I G     +  EA R+  EM+ +G  P+
Sbjct: 539 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 222/443 (50%), Gaps = 9/443 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V+G +        A     LI  LC   R+ +A  +   +   GC PDV TY  L+   C
Sbjct: 150 VVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAAC 209

Query: 70  RTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           +      AL L + M A G       CEPN VTY  IID +C+EG VD+A+ELL  +  +
Sbjct: 210 KGRGYRQALELIDFMRAEG-------CEPNNVTYNVIIDAMCREGDVDQARELLNSLPSR 262

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             KPN V Y +V++GFC  + W +A  +  EM+ +   PN  T NVI++ LC+ G + + 
Sbjct: 263 GCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKV 322

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           +  L+ M +HG   +  TYN ++ G C  G V+ A EL  +M+S GCK  + +Y+ ++ G
Sbjct: 323 TLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKG 382

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C     E A  L  +M      PD    NT+     +   + +AF++F +M   G   +
Sbjct: 383 LCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPN 442

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           + TY T I GL K G + +A+EL + +       D + Y  L + L K  ++E  +++  
Sbjct: 443 STTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRVLTESLNKEDKIEEVVQVVH 501

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            L    + P  V Y+ ++ GLC +G+ D A D+  DM     +P+  T+ +LI G     
Sbjct: 502 KLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEG 561

Query: 429 EPSKVIELLHKMKEINVMPDASI 451
              +  ELL ++   +V+ ++ I
Sbjct: 562 YSKEARELLSRLCSRDVLSNSLI 584



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 215/430 (50%), Gaps = 19/430 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV+   VVL  +L     PD VT+  L++  C      +A  L   +R  GCEP+  TY
Sbjct: 177 GRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTY 236

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK-EGFVDKAKE 120
             +++ +CR      A  L   + +        C+PNTV Y T++ G C  E +VD A E
Sbjct: 237 NVIIDAMCREGDVDQARELLNSLPSRG------CKPNTVNYNTVLKGFCSIERWVD-ADE 289

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDEL 179
           +L +M  +N  PN  T   +I   C  K   +   L++E M + G   NVVT+N ++  +
Sbjct: 290 ILDEMVRENCPPNEATLNVIINTLCR-KGLLQKVTLYLEKMSKHGCTANVVTYNAVISGM 348

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+ G +D A  LL  M   G +PD  TYNT+L G C   R   A+EL + M         
Sbjct: 349 CEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDN 408

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +++ +I+ +C+   I  A  ++ +M  KG  P+   ++T+  GL +  ++E+A +L +E
Sbjct: 409 STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G   D   YR   + L K   I E V++ H L+          YN+++ GLC++G+
Sbjct: 469 MANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGK 527

Query: 360 LEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF-----LDMEENAVVPN 413
            + A+++   +  CG + P+  TY I+I GL  +G   +AR+L       D+  N+++ N
Sbjct: 528 TDYAIDVLADMVSCGCM-PDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKN 586

Query: 414 -VITFDMLIR 422
             +  D  IR
Sbjct: 587 EALLLDQNIR 596



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 189/407 (46%), Gaps = 12/407 (2%)

Query: 37  SRIMEAAALFTKLRVFGCEP---DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGV 93
           S ++    L   LR+ G  P   DV     LV  LCR      A  + E           
Sbjct: 72  SALIHRGDLDAALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVEACGP------- 124

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
             E    TY  ++DG C+ G ++ A+ ++  M       +   +  +I   C      +A
Sbjct: 125 --EATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             +   M+ +G  P+VVT+N+++   CK     +A  L+D M   G  P+  TYN ++D 
Sbjct: 183 LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C  G V+ A+EL  S+ S GCK    +Y+ ++ G+C  +    A  +  EM+ +   P+
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPN 302

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
               N +   L     +++     ++M ++G  A+  TY   I G+C+ G +  A+EL  
Sbjct: 303 EATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLS 362

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            ++   C+ DI  YN+++ GLC + R E A EL   +     +P+  T++ +I   C  G
Sbjct: 363 NMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKG 422

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            + +A ++F  M E    PN  T+  +I G  +  +  + +ELL++M
Sbjct: 423 LILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEM 469



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 178/365 (48%), Gaps = 3/365 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+      ++  LC+ G    A  ++   +    +    TY +++ G+C A    +A+R+
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVV---EACGPEATAATYGALVDGYCRAGLLEDARRV 150

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M       +    N ++  LC+ G++ +A  +LD M+  G  PD  TYN LL   C 
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
                 A EL   M + GC+    +Y+++I+  C+  +++ A  L + + S+G KP+ V 
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +NT+  G   I +   A ++ DEM R     +  T    I+ LC+ G + +       + 
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMS 330

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C  ++  YN++I G+C+ G ++ ALEL  ++      P++VTY+ ++ GLC+  + +
Sbjct: 331 KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWE 390

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A +L + M +N  +P+  TF+ +I  + +     +  E+  +M E    P+++  S ++
Sbjct: 391 DAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTII 450

Query: 457 DLLAK 461
             L K
Sbjct: 451 GGLTK 455



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 162/349 (46%), Gaps = 6/349 (1%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+V     ++R  C      +A R+ +E    G +    T+  ++D  C+ G +++A R+
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARV-VEAC--GPEATAATYGALVDGYCRAGLLEDARRV 150

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           +  M  H     A+ +N L+   C  GRV  A  +   M   GC   V +Y+IL+   CK
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            +    AL L   M ++G +P+ V +N +   +     V++A +L + +   G   +T  
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T + G C     V+A E+   +    C  +    N +I+ LC+ G L+        + 
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMS 330

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                 NVVTY+ +I G+C  G +D A +L  +M+     P+++T++ +++G    +   
Sbjct: 331 KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWE 390

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
              EL+ KM + + +PD S  + ++    +  + L    +F V +Q  E
Sbjct: 391 DAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQ---AFEVFKQMPE 436


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 237/454 (52%), Gaps = 11/454 (2%)

Query: 13  RILKS---CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           R+LKS   C + +A    SL+ GL     +  A  ++ ++   G + +V+T   ++N LC
Sbjct: 312 RVLKSKGLCVSINACN--SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALC 369

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +        +   +M     E GV   P+ VTY T+I+  C++G +++A EL+  M  K 
Sbjct: 370 KNQKIENTKSFLSDME----EKGVF--PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +KP V TY ++I G C    +  AK +  EM+  G+ P+  T+N+++ E C+N  M +A 
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 483

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           R+ D M   GV PD  +++ L+      G ++ A + F  M++ G       Y+ILI G+
Sbjct: 484 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+N  +  AL +  EML +G   DVV +NT+  GL +   +  A +LF EM   GV  D 
Sbjct: 544 CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 603

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +T+ T I+G  K+G + +AV LF  +     + D+  YN+LIDG CK   +E   EL+  
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + PN ++Y I+I G CN G + +A  L+ +M E      +IT + +++G+ R   
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             K  E L  M    ++PD    + +++   K E
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 757



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 230/447 (51%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++  +      P   T+ ++I GLC   + + A  +  ++   G  PD  TY
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+   CR  + + A  +F+EM +     GVV  P+ V+++ +I  L K G +D+A + 
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQ----GVV--PDLVSFSALIGLLSKNGCLDQALKY 520

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              MK+  + P+ V YT +I GFC     +EA ++  EM++QG   +VVT+N I++ LCK
Sbjct: 521 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCK 580

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + EA  L   M + GV PD +T+ TL++G+   G +N A  LF  M     K  V +
Sbjct: 581 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVT 640

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+CK  E+E    L+++M+S+ I P+ + +  L  G   +  V  AF+L+DEM 
Sbjct: 641 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 700

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G  A   T  T + G C+ G  V+A E    + +     D   YN+LI+G  K   ++
Sbjct: 701 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 760

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +    L+P+V+TY++++ G    G+M +A  + L M E  V P+  T+  LI
Sbjct: 761 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G +  N   +   +  +M +   +PD
Sbjct: 821 NGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 245/458 (53%), Gaps = 11/458 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ +LI   C +  + EA  L   +   G +P VFTY  ++NGLC+T   + A  +
Sbjct: 391 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 450

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM        +   P+T TY  ++   C+   +  A+ +  +M  + + P++V+++++
Sbjct: 451 LDEM------LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL 504

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I         ++A + F +M + G+ P+ V + +++   C+NG M EA ++ D M++ G 
Sbjct: 505 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 564

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D  TYNT+L+G C    ++ A ELF  M   G     ++++ LINGY K+  +  A++
Sbjct: 565 XLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVT 624

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+  M+ + +KPDVV +NTL  G  +  ++E+  +L+++M    +  +  +Y   I+G C
Sbjct: 625 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 684

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G + EA  L+  +     E  I   N+++ G C++G    A E   ++    +VP+ +
Sbjct: 685 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 744

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I G   +  MD+A  L   ME + ++P+VIT+++++ GF R     +   ++ KM
Sbjct: 745 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 804

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLP-SFTVHEQ 477
            E  V PD S  + +++      ++ N+L  +F VH++
Sbjct: 805 IERGVNPDRSTYTSLIN----GHVTQNNLKEAFRVHDE 838



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 191/398 (47%), Gaps = 35/398 (8%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C  N + +  ++    +   + +  E    +K K +  ++    S++ G       + A 
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 343

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            ++ E++  GVQ NV T N++++ LCKN K++     L  M + GV PD  TYNTL++ +
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G +  A EL  SM   G K  VF+Y+ +ING CK  +   A  +  EML  G+ PD 
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 275 VIHNTLFV----------------------------------GLFEIHQ-VERAFKLFDE 299
             +N L V                                  GL   +  +++A K F +
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 523

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+  G+A D   Y   I G C+NG + EA+++   +    C  D+  YN++++GLCK   
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  A ELF  +    + P+  T++ +I G   DG M+KA  LF  M +  + P+V+T++ 
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           LI GF + +E  KV EL + M    + P+     I+++
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 681



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 169/334 (50%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N   N + +  ++R +  A+   E    F  +  +G+  ++   N ++  L K G +D A
Sbjct: 283 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             +   +++ GV+ + +T N +++  C   ++ + K     ME  G    V +Y+ LIN 
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           YC+   +E A  L   M  KG+KP V  +N +  GL +  +  RA  + DEM + G++ D
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T TY   +   C+N  +++A  +F  +       D+ ++++LI  L K+G L+ AL+ FR
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L P+ V Y+I+IGG C +G M +A  +  +M E     +V+T++ ++ G  +  
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             S+  EL  +M E  V PD    + +++   K+
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKD 616



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 150/297 (50%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N + F++++    +  K+ E      ++   G+       N+LL G    G V+ A E++
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             +   G +  V++ +I+IN  CKN++IE   S  S+M  KG+ PDVV +NTL       
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             +E AF+L D M   G+    +TY   I+GLCK G  + A  +   +  +    D   Y
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N L+   C++  +  A  +F  +P   +VP++V++S +IG L  +G +D+A   F DM+ 
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             + P+ + + +LI GF R    S+ +++  +M E     D    + +++ L K ++
Sbjct: 527 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 89/168 (52%), Gaps = 6/168 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG VS  F +   +++  F    +T  +++KG C     ++A    + + + G  PD  T
Sbjct: 686 MGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 745

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG  +  +   A  L  +M N     G++  P+ +TY  I++G  ++G + +A+ 
Sbjct: 746 YNTLINGFIKEENMDRAFALVNKMENS----GLL--PDVITYNVILNGFSRQGRMQEAEL 799

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           ++L+M ++ + P+  TYTS+I G     +  EA R+  EM+ +G  P+
Sbjct: 800 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 240/463 (51%), Gaps = 6/463 (1%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +GR+     +L  +    +TPD +++++++ G C    + +   L   ++  G +P+ + 
Sbjct: 702  LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 761

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y +++  LCR      A   F EM       G++  P+TV YTT+IDG CK G +  A +
Sbjct: 762  YGSIIGLLCRICKLAEAEEAFSEMIRQ----GIL--PDTVVYTTLIDGFCKRGDIRAASK 815

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               +M  ++I P+V+TYT++I GFC   D  EA +LF EM  +G++P+ VTF  +++  C
Sbjct: 816  FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 875

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            K G M +A R+ + MIQ G  P+  TY TL+DG C  G ++ A EL   M  +G +  +F
Sbjct: 876  KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +Y+ ++NG CK+  IE A+ L  E  + G+  D V + TL     +  ++++A ++  EM
Sbjct: 936  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995

Query: 301  QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               G+     T+   ++G C +G + +  +L + +       +   +NSL+   C    L
Sbjct: 996  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 1055

Query: 361  EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            + A  +++ +    + P+  TY  ++ G C    M +A  LF +M+      +V T+ +L
Sbjct: 1056 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 1115

Query: 421  IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            I+GF++  +  +  E+  +M+   +  D  I     D   K +
Sbjct: 1116 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 1158



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 224/422 (53%), Gaps = 13/422 (3%)

Query: 39   IMEAAALFTKLRVFGCEPDVFT---YTTLVNGLC-RTSHTIVALNLFEEMANGNGEFGVV 94
            + EA  +F K+  +G    V +   Y T ++  C +T+  I+    F E+         V
Sbjct: 634  LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVG--------V 685

Query: 95   CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
            C  N  +Y  +I  +C+ G + +A  LLL M+ K   P+V++Y++V+ G+C   + ++  
Sbjct: 686  CW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 744

Query: 155  RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            +L   M  +G++PN   +  I+  LC+  K+ EA      MI+ G+ PD   Y TL+DGF
Sbjct: 745  KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 804

Query: 215  CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
            C  G +  A + F  M S      V +Y+ +I+G+C+  ++  A  L+ EM  KG++PD 
Sbjct: 805  CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 864

Query: 275  VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
            V    L  G  +   ++ AF++ + M + G + +  TY T IDGLCK G +  A EL H 
Sbjct: 865  VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 924

Query: 335  LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
            +  +  + +I  YNS+++GLCKSG +E A++L        L  + VTY+ ++   C  G+
Sbjct: 925  MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 984

Query: 395  MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
            MDKA+++  +M    + P ++TF++L+ GF          +LL+ M    + P+A+  + 
Sbjct: 985  MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 1044

Query: 455  VV 456
            +V
Sbjct: 1045 LV 1046



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 220/451 (48%), Gaps = 6/451 (1%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            +  ++  +I  +C   RI EA  L   + + G  PDV +Y+T+VNG CR         L 
Sbjct: 688  NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747

Query: 82   EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            E M           +PN+  Y +II  LC+   + +A+E   +M  + I P+ V YT++I
Sbjct: 748  EVMKRKG------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801

Query: 142  RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
             GFC   D   A + F EM  + + P+V+T+  I+   C+ G M EA +L   M   G+ 
Sbjct: 802  DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 861

Query: 202  PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            PD+ T+  L++G+C  G +  A  +   M   GC   V +Y+ LI+G CK  +++ A  L
Sbjct: 862  PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921

Query: 262  YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              EM   G++P++  +N++  GL +   +E A KL  E +  G+ ADT TY T +D  CK
Sbjct: 922  LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 981

Query: 322  NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            +G + +A E+   +     +  I  +N L++G C  G LE   +L   +    + PN  T
Sbjct: 982  SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1041

Query: 382  YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
            ++ ++   C    +  A  ++ DM    V P+  T++ L++G  +     +   L  +MK
Sbjct: 1042 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 1101

Query: 442  EINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
                    S  S+++    K +  L +   F
Sbjct: 1102 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 1132



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 162/307 (52%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F E  + GV  NV ++N+++  +C+ G++ EA  LL LM   G  PD  +Y+T+++G+C
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G ++   +L   M+  G K   + Y  +I   C+  ++  A   +SEM+ +GI PD V
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           ++ TL  G  +   +  A K F EM    +  D  TY   I G C+ G +VEA +LFH +
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                E D   +  LI+G CK+G ++ A  +   +      PNVVTY+ +I GLC +G +
Sbjct: 856 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 915

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           D A +L  +M +  + PN+ T++ ++ G  +     + ++L+ + +   +  D    + +
Sbjct: 916 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975

Query: 456 VDLLAKN 462
           +D   K+
Sbjct: 976 MDAYCKS 982



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 8/198 (4%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G +     +L  +L     P  VTF  L+ G C    + +   L   +   G  P+  T+
Sbjct: 983  GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1042

Query: 62   TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             +LV   C  ++   A  ++++M + G G       P+  TY  ++ G CK   + +A  
Sbjct: 1043 NSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKGHCKARNMKEAWF 1095

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L  +MK K    +V TY+ +I+GF   K + EA+ +F +M  +G+  +   F+   D   
Sbjct: 1096 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 1155

Query: 181  KNGKMDEASRLLDLMIQH 198
            K  + D     +D +I++
Sbjct: 1156 KGKRPDTIVDPIDEIIEN 1173



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 1/157 (0%)

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS-GRLEIAL 364
            +D   +  F   L   G + EA  +F  +        + + N  +  L K   +   A+
Sbjct: 615 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAI 674

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            +FR  P   +  NV +Y+I+I  +C  G++ +A  L L ME     P+VI++  ++ G+
Sbjct: 675 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 734

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            R  E  KV +L+  MK   + P++ I   ++ LL +
Sbjct: 735 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 771


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 241/472 (51%), Gaps = 41/472 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ ++F +++   C    ++ A A F  L  FG   D FTYT+L+ G C+      A  +
Sbjct: 188 PNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKV 247

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE M          C  N V+YT +I G C+ G +D+A EL  QMK+    P+V TYT +
Sbjct: 248 FEIMPQEG------CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVL 301

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  FC      EA + F EM++ G++PNV T+ V++D  CK GKMDE   +L  M++ G+
Sbjct: 302 VAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGL 361

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
                 +N L+DG+C  G +  A  +  SM+         +Y+ LI G+C+ K ++ A++
Sbjct: 362 VSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMA 421

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L ++M    + P++V +NTL  GL +   V+ A++L   M ++G   D  T+  FID LC
Sbjct: 422 LLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLC 481

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + +A ++F +L+    E +   Y +LIDG CK+ +   A  LF+ +      PN +
Sbjct: 482 KMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSI 541

Query: 381 TYSIMIGGLCNDGQMDKARDL----------------------------------FLD-M 405
           T+++++ GL  +G+++ A  L                                  FLD M
Sbjct: 542 TFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQM 601

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +   PNV+T+   I+ + R     +  E++ K+KE  ++ D+ I  ++V+
Sbjct: 602 ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVN 653



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 225/527 (42%), Gaps = 104/527 (19%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + V++T+LI G C   +I EA  LF +++  GC PDV TYT LV   C       AL  F
Sbjct: 259 NEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFF 318

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK------------- 128
           EEM     E G+  EPN  TYT +ID  CK G +D+  E+L  M +K             
Sbjct: 319 EEMV----ENGI--EPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372

Query: 129 ----------------------NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
                                  + PN  TY  +I GFC  K  + A  L  +M +  + 
Sbjct: 373 DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLS 432

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           PN+VT+N ++  LCK   +D A RL  LMI+ G  PD  T+   +D  C  G+V  A ++
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQV 492

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           F S++    +   F Y+ LI+GYCK ++   A  L+  ML +G  P+ +  N L  GL +
Sbjct: 493 FESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK 552

Query: 287 IHQVERAFKL-----------------------------------FDEMQRNGVAADTWT 311
             +VE A  L                                    D+M  +G   +  T
Sbjct: 553 EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVT 612

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE-LFRSL 370
           Y  FI   C+ G ++EA E+   ++      D   Y+ L++     G+L+ A   L R  
Sbjct: 613 YTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMF 672

Query: 371 PCGVLVPNVVTYSIMIGGL--------------------CNDGQMDKARD------LFLD 404
             G   P+  TYSI++  L                     ++  + K  D      LF  
Sbjct: 673 DTGC-EPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEK 731

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           M E   VPNV T+  LI+G  ++   S    L + MKE  + P  +I
Sbjct: 732 MVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENI 778



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 201/426 (47%), Gaps = 19/426 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P++ T+  LI G C +  +  A AL  K+      P++ TY TL++GLC+      A  L
Sbjct: 398 PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRL 457

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M       G V  P+  T+   ID LCK G V++A ++   +K+K+ + N   YT++
Sbjct: 458 HHLMIKD----GFV--PDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTAL 511

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C A+ +++A  LF  M+ +G  PN +TFNV++D L K GK+++A  L+D+M +   
Sbjct: 512 IDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDA 571

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P   TY  L++        + A      M S GC+  V +Y+  I  YC+   +  A  
Sbjct: 572 KPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEE 631

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +  ++  +GI  D  I++ L      I Q++ AF +   M   G      TY   +  L 
Sbjct: 632 MVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLI 691

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG--LCKSGRLEIALELFRSLPCGVLVPN 378
              Y  E + L           D+ + N  +D   + K    EI   LF  +     VPN
Sbjct: 692 FEKYNKEGMGL-----------DLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPN 740

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V TYS +I GLC    +  A  LF  M+E+ + P+    + L+    ++    + + LL 
Sbjct: 741 VNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLD 800

Query: 439 KMKEIN 444
            M E N
Sbjct: 801 SMMEYN 806



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 207/434 (47%), Gaps = 34/434 (7%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++K  F PD  TF + I  LC   ++ +A  +F  L+    E + F YT L++G C+   
Sbjct: 461 MIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEK 520

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  LF+ M          C PN++T+  ++DGL KEG V+ A  L+  M   + KP 
Sbjct: 521 FSDAHLLFKRMLFEG------CFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPT 574

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V TYT +I       D++ A     +M+  G QPNVVT+   +   C+ G++ EA  ++ 
Sbjct: 575 VHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVV 634

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC--- 250
            + + G+  D+F Y+ L++ +   G+++ A  + + M   GC+ +  +YSIL+       
Sbjct: 635 KIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEK 694

Query: 251 KNKE-----------------------IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
            NKE                        E    L+ +M+ +G  P+V  ++ L  GL ++
Sbjct: 695 YNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKV 754

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             +  AF+LF+ M+ +G++     + + +   CK G   EA+ L  ++        + +Y
Sbjct: 755 EHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESY 814

Query: 348 NSLIDGLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
             L+ GL + G  E A E+FRS L CG     VV + +++ GL   G +D+   L   ME
Sbjct: 815 KLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVV-WKVLLDGLVRKGYVDECSQLRDIME 873

Query: 407 ENAVVPNVITFDML 420
           +     +  T  ML
Sbjct: 874 KTGCRLHSDTHTML 887



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 189/382 (49%), Gaps = 6/382 (1%)

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF++M N     GV  EPN +++ T+++  CK G V  AK     +       +  TYTS
Sbjct: 177 LFKDMLND----GV--EPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTS 230

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G+C   +  +A ++F  M  +G   N V++  ++   C+ GK+DEA  L   M + G
Sbjct: 231 LILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG 290

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD  TY  L+  FC  G+   A + F  M   G +  V++Y++LI+ +CK  +++  +
Sbjct: 291 CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM 350

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + S ML KG+   VV  N L  G  +   +E A  + D M+ N V  ++ TY   I G 
Sbjct: 351 EMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGF 410

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C+   +  A+ L + +   K   ++  YN+LI GLCK+  ++ A  L   +     VP+ 
Sbjct: 411 CRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQ 470

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            T+   I  LC  G++++A  +F  ++E     N   +  LI G+ +  + S    L  +
Sbjct: 471 RTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKR 530

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M      P++   ++++D L K
Sbjct: 531 MLFEGCFPNSITFNVLLDGLRK 552



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 184/367 (50%), Gaps = 2/367 (0%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           +  +Y  +   L + G +D+   L   M +  ++PN++++ +++   C   +   AK  F
Sbjct: 154 SVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYF 213

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             +M  G   +  T+  ++   CK  ++ +A ++ ++M Q G   +  +Y  L+ GFC  
Sbjct: 214 CGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEV 273

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPDVVI 276
           G+++ A ELF  M+  GC   V +Y++L+  +C+  KE E AL  + EM+  GI+P+V  
Sbjct: 274 GKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETE-ALKFFEEMVENGIEPNVYT 332

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +  L     ++ +++   ++   M   G+ +    +   IDG CK G + +A+ +  +++
Sbjct: 333 YTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMK 392

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
           + K   + R YN LI G C+   ++ A+ L   +    L PN+VTY+ +I GLC    +D
Sbjct: 393 LNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVD 452

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L   M ++  VP+  TF   I    ++ +  +  ++   +KE +   +  + + ++
Sbjct: 453 SAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALI 512

Query: 457 DLLAKNE 463
           D   K E
Sbjct: 513 DGYCKAE 519



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 182/424 (42%), Gaps = 58/424 (13%)

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           H + ALN F+ +   +G    V      +Y  ++  L + GF+  A+     +++  IK 
Sbjct: 82  HPLTALNFFKWIHYQHGFIHTV-----HSYQPLLFILVRNGFLRAAE----NVRNSMIKS 132

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            V ++              EA+ +   +       +V ++N +   L + G +DE + L 
Sbjct: 133 CVSSH--------------EARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLF 178

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  GV P+  ++NT+++  C  G V  AK  F  +   G     F+Y+ LI GYCK 
Sbjct: 179 KDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKI 238

Query: 253 KE-----------------------------------IEGALSLYSEMLSKGIKPDVVIH 277
            E                                   I+ AL L+ +M   G  PDV  +
Sbjct: 239 HELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTY 298

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             L     E+ +   A K F+EM  NG+  + +TY   ID  CK G + E +E+  T+  
Sbjct: 299 TVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLE 358

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                 +  +N+LIDG CK G +E A+ +  S+    + PN  TY+ +I G C    MD+
Sbjct: 359 KGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDR 418

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  L   M EN + PN++T++ LI G  +         L H M +   +PD       +D
Sbjct: 419 AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFID 478

Query: 458 LLAK 461
            L K
Sbjct: 479 CLCK 482



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 163/373 (43%), Gaps = 71/373 (19%)

Query: 3   RVSHGFVVLGRIL-KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           + S   ++  R+L + CF P+++TF  L+ GL  E ++ +A +L   +  F  +P V TY
Sbjct: 520 KFSDAHLLFKRMLFEGCF-PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTY 578

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+  + R S    A N+F +    +G     C+PN VTYT  I   C++G + +A+E+
Sbjct: 579 TILIEEILRESDFDRA-NMFLDQMISSG-----CQPNVVTYTAFIKAYCRQGRLLEAEEM 632

Query: 122 LLQMKDKNI-----------------------------------KPNVVTYTSVIRGFCY 146
           ++++K++ I                                   +P+  TY+ +++   +
Sbjct: 633 VVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIF 692

Query: 147 AK--------------------------DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            K                          D+     LF +M++QG  PNV T++ ++  LC
Sbjct: 693 EKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLC 752

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   +  A RL + M + G+ P    +N+LL   C  G    A  L  SM        + 
Sbjct: 753 KVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLE 812

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY +L+ G  +    E A  ++  +LS G   D V+   L  GL     V+   +L D M
Sbjct: 813 SYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIM 872

Query: 301 QRNG--VAADTWT 311
           ++ G  + +DT T
Sbjct: 873 EKTGCRLHSDTHT 885



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 129/298 (43%), Gaps = 32/298 (10%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           + L +++ S   P+ VT+T+ IK  C + R++EA  +  K++  G   D F Y  LVN  
Sbjct: 596 MFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAY 655

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC-----KEGF--------- 114
                   A  +   M      F   CEP+  TY+ ++  L      KEG          
Sbjct: 656 GCIGQLDSAFGVLIRM------FDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNI 709

Query: 115 -VDKAK-----------ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD 162
            VD A             L  +M ++   PNV TY+ +I+G C  +  + A RLF  M +
Sbjct: 710 SVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKE 769

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
            G+ P+    N ++   CK G  +EA RLLD M+++       +Y  L+ G    G    
Sbjct: 770 SGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEK 829

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           A+E+F S+ S G  +    + +L++G  +   ++    L   M   G +     H  L
Sbjct: 830 AEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 229/429 (53%), Gaps = 6/429 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+ GL     +  A  ++ ++   G E +V+T   +VN LC+       +    +M  G 
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGK 286

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           G F      + VTY T+I+  C+EG V++A +LL     + ++P ++TY +++ G C   
Sbjct: 287 GVFA-----DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIG 341

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            ++ AK + IEM+  G+ PN  T+N ++ E+C+   + EA  + D M + GV PD  +++
Sbjct: 342 KYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFS 401

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           +L+      G +  A   F  ME  G       Y+ILI+G+C+N  +  AL +  EML++
Sbjct: 402 SLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLAR 461

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G   DVV +NT   GL +      A  LF+EM   G+  D +T+ T I G CK+G + +A
Sbjct: 462 GCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + LF  +     + D   YN+LIDG CK+G +  A EL+  +    ++P+ ++Y  ++ G
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNG 581

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C+ G + +A +L   M E  + PN++T + LI+G+ R  +  K  E L KM    ++PD
Sbjct: 582 FCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPD 641

Query: 449 ASIVSIVVD 457
           +   + ++D
Sbjct: 642 SFSYNTLID 650



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 132/413 (31%), Positives = 225/413 (54%), Gaps = 6/413 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      VL  +L+   TP+A T+ +L+  +C    I+EA  +F ++   G  PD+ +
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +++L+  L R  H   AL  F EM       G+V  P+ V YT +IDG C+ G +  A +
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERS----GIV--PDNVIYTILIDGFCRNGALSDALK 453

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  +    +VVTY + + G C  K + +A  LF EM+++G+ P+  TF  ++   C
Sbjct: 454 MRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G MD+A  L + M++  ++PD  TYNTL+DGFC  G +  AKEL+  M          
Sbjct: 514 KDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI 573

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY  ++NG+C +  +  AL+L  +ML KGI+P++V  NTL  G      + +A++   +M
Sbjct: 574 SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG+  D+++Y T IDG  K   + +A  L + +     +F+I  YN +++G C  G++
Sbjct: 634 ISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKM 693

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           + A ++ R +    + P+  TYS +I G  +   M +A     +M +  +VP+
Sbjct: 694 QEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 228/436 (52%), Gaps = 6/436 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+ +LI   C E  + EA  L       G EP + TY  ++ GLC+      A ++ 
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM     + G+   PN  TY T++  +C+   + +A+E+  +M  + + P++V+++S+I
Sbjct: 351 IEML----QLGLT--PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
                     +A   F EM   G+ P+ V + +++D  C+NG + +A ++ D M+  G  
Sbjct: 405 GVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCF 464

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            D  TYNT L+G C       A  LF  M   G     ++++ LI GYCK+  ++ AL+L
Sbjct: 465 MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNL 524

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M+   +KPD V +NTL  G  +  ++ RA +L+D+M R  +  D  +Y T ++G C 
Sbjct: 525 FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCS 584

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           +G + EA+ L   +       ++   N+LI G C+SG +  A E    +    ++P+  +
Sbjct: 585 SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFS 644

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ +I G   +  ++KA  L  +ME+  +  N+IT+++++ GF    +  +  ++L KM 
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704

Query: 442 EINVMPDASIVSIVVD 457
           EI + PD +  S +++
Sbjct: 705 EIGINPDGATYSSLIN 720



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 221/441 (50%), Gaps = 6/441 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   + + G +++     +  T   ++  LC + +        + +   G   D+ TY
Sbjct: 236 GWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTY 295

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+N  CR      A  L    ++         EP  +TY  I+ GLCK G  D+AK++
Sbjct: 296 NTLINAYCREGLVEEAFQLLNSFSSRG------MEPGLLTYNAILYGLCKIGKYDRAKDV 349

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L++M    + PN  TY +++   C   +  EA+ +F EM  +GV P++V+F+ ++  L +
Sbjct: 350 LIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG + +A      M + G+ PD   Y  L+DGFC  G ++ A ++   M + GC   V +
Sbjct: 410 NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVT 469

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  +NG CK K    A  L++EM+ +G+ PD     TL  G  +   +++A  LF+ M 
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R  +  D  TY T IDG CK G +  A EL+  +       D  +Y ++++G C SG L 
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLP 589

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL L   +    + PN+VT + +I G C  G M KA +    M  N ++P+  +++ LI
Sbjct: 590 EALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649

Query: 422 RGFIRINEPSKVIELLHKMKE 442
            G+++     K   L+++M++
Sbjct: 650 DGYLKEANLEKAFILINEMEK 670



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 225/447 (50%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F +L         P  +T+ +++ GLC   +   A  +  ++   G  P+  TY
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  +CR  + + A  +F+EM+      GV+  P+ V+++++I  L + G + +A   
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRR----GVL--PDLVSFSSLIGVLARNGHLYQALMH 419

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+   I P+ V YT +I GFC     ++A ++  EM+ +G   +VVT+N  ++ LCK
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
                +A  L + M++ G+ PD +T+ TL+ G+C  G ++ A  LF +M     K    +
Sbjct: 480 KKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVT 539

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+CK  E+  A  L+ +M+ K I PD + + T+  G      +  A  L D+M 
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQML 599

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  T  T I G C++G + +A E    +       D  +YN+LIDG  K   LE
Sbjct: 600 EKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +    L  N++TY++++ G C +G+M +A  +   M E  + P+  T+  LI
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G +  +   +      +M +  ++PD
Sbjct: 720 NGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  ++ E++  G++ NV T N++++ LCK+ K +     L  M   GV  D  TYNTL++
Sbjct: 241 AWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLIN 300

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
            +C  G V  A +L  S  S G +  + +Y+ ++ G CK  + + A  +  EML  G+ P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +   +NTL V +     +  A ++FDEM R GV  D  ++ + I  L +NG++ +A+  F
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +       D   Y  LIDG C++G L  AL++   +       +VVTY+  + GLC  
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
                A  LF +M E  +VP+  TF  LIRG+ +     K + L   M   N+ PD    
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 453 SIVVDLLAK 461
           + ++D   K
Sbjct: 541 NTLIDGFCK 549



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 137/271 (50%)

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           + +++++    +  K+ E S    ++ + GV       N LL G   TG V+ A E++  
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           +   G +  V++ +I++N  CK+++ E  +   S+M  KG+  D+V +NTL         
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           VE AF+L +     G+     TY   + GLCK G    A ++   +  L    +   YN+
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           L+  +C+   +  A E+F  +    ++P++V++S +IG L  +G + +A   F +ME + 
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +VP+ + + +LI GF R    S  +++  +M
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEM 458



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 125/256 (48%)

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y+ L+  +    ++    E F  +   G   ++ + + L+ G  +   ++ A  +Y E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             GI+ +V   N +   L +  + E       +M+  GV AD  TY T I+  C+ G + 
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA +L ++      E  +  YN+++ GLCK G+ + A ++   +    L PN  TY+ ++
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             +C    + +A+++F +M    V+P++++F  LI    R     + +    +M+   ++
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 447 PDASIVSIVVDLLAKN 462
           PD  I +I++D   +N
Sbjct: 430 PDNVIYTILIDGFCRN 445



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 115/237 (48%)

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y +L+  Y + K++      +  +  KG+   +   N L  GL     V+ A++++ E+ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G+  + +T    ++ LCK+      +     +       DI  YN+LI+  C+ G +E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L  S     + P ++TY+ ++ GLC  G+ D+A+D+ ++M +  + PN  T++ L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
               R +   +  E+  +M    V+PD    S ++ +LA+N     +L  F   E+ 
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 229/429 (53%), Gaps = 6/429 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+ GL     +  A  ++ ++   G E +V+T   +VN LC+       +    +M  G 
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGK 286

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           G F      + VTY T+I+  C+EG V++A +LL     + ++P ++TY +++ G C   
Sbjct: 287 GVFA-----DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIG 341

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            ++ AK + IEM+  G+ PN  T+N ++ E+C+   + EA  + D M + GV PD  +++
Sbjct: 342 KYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFS 401

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           +L+      G +  A   F  ME  G       Y+ILI+G+C+N  +  AL +  EML++
Sbjct: 402 SLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLAR 461

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G   DVV +NT   GL +      A  LF+EM   G+  D +T+ T I G CK+G + +A
Sbjct: 462 GCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + LF  +     + D   YN+LIDG CK+G +  A EL+  +    ++P+ ++Y  ++ G
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNG 581

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C+ G + +A +L   M E  + PN++T + LI+G+ R  +  K  E L KM    ++PD
Sbjct: 582 FCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPD 641

Query: 449 ASIVSIVVD 457
           +   + ++D
Sbjct: 642 SFSYNTLID 650



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 132/413 (31%), Positives = 225/413 (54%), Gaps = 6/413 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      VL  +L+   TP+A T+ +L+  +C    I+EA  +F ++   G  PD+ +
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +++L+  L R  H   AL  F EM       G+V  P+ V YT +IDG C+ G +  A +
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERS----GIV--PDNVIYTILIDGFCRNGALSDALK 453

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  +    +VVTY + + G C  K + +A  LF EM+++G+ P+  TF  ++   C
Sbjct: 454 MRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G MD+A  L + M++  ++PD  TYNTL+DGFC  G +  AKEL+  M          
Sbjct: 514 KDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI 573

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY  ++NG+C +  +  AL+L  +ML KGI+P++V  NTL  G      + +A++   +M
Sbjct: 574 SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG+  D+++Y T IDG  K   + +A  L + +     +F+I  YN +++G C  G++
Sbjct: 634 ISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKM 693

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           + A ++ R +    + P+  TYS +I G  +   M +A     +M +  +VP+
Sbjct: 694 QEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 228/436 (52%), Gaps = 6/436 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+ +LI   C E  + EA  L       G EP + TY  ++ GLC+      A ++ 
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM     + G+   PN  TY T++  +C+   + +A+E+  +M  + + P++V+++S+I
Sbjct: 351 IEML----QLGLT--PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
                     +A   F EM   G+ P+ V + +++D  C+NG + +A ++ D M+  G  
Sbjct: 405 GVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCF 464

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            D  TYNT L+G C       A  LF  M   G     ++++ LI GYCK+  ++ AL+L
Sbjct: 465 MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNL 524

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           +  M+   +KPD V +NTL  G  +  ++ RA +L+D+M R  +  D  +Y T ++G C 
Sbjct: 525 FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCS 584

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           +G + EA+ L   +       ++   N+LI G C+SG +  A E    +    ++P+  +
Sbjct: 585 SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFS 644

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ +I G   +  ++KA  L  +ME+  +  N+IT+++++ GF    +  +  ++L KM 
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704

Query: 442 EINVMPDASIVSIVVD 457
           EI + PD +  S +++
Sbjct: 705 EIGINPDGATYSSLIN 720



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 221/441 (50%), Gaps = 6/441 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   + + G +++     +  T   ++  LC + +        + +   G   D+ TY
Sbjct: 236 GWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTY 295

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+N  CR      A  L    ++         EP  +TY  I+ GLCK G  D+AK++
Sbjct: 296 NTLINAYCREGLVEEAFQLLNSFSSRG------MEPGLLTYNAILYGLCKIGKYDRAKDV 349

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L++M    + PN  TY +++   C   +  EA+ +F EM  +GV P++V+F+ ++  L +
Sbjct: 350 LIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG + +A      M + G+ PD   Y  L+DGFC  G ++ A ++   M + GC   V +
Sbjct: 410 NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVT 469

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  +NG CK K    A  L++EM+ +G+ PD     TL  G  +   +++A  LF+ M 
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R  +  D  TY T IDG CK G +  A EL+  +       D  +Y ++++G C SG L 
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLP 589

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL L   +    + PN+VT + +I G C  G M KA +    M  N ++P+  +++ LI
Sbjct: 590 EALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649

Query: 422 RGFIRINEPSKVIELLHKMKE 442
            G+++     K   L+++M++
Sbjct: 650 DGYLKEANLEKAFILINEMEK 670



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 225/447 (50%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F +L         P  +T+ +++ GLC   +   A  +  ++   G  P+  TY
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  +CR  + + A  +F+EM+      GV+  P+ V+++++I  L + G + +A   
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRR----GVL--PDLVSFSSLIGVLARNGHLYQALMH 419

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+   I P+ V YT +I GFC     ++A ++  EM+ +G   +VVT+N  ++ LCK
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
                +A  L + M++ G+ PD +T+ TL+ G+C  G ++ A  LF +M     K    +
Sbjct: 480 KKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVT 539

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+CK  E+  A  L+ +M+ K I PD + + T+  G      +  A  L D+M 
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQML 599

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  T  T I G C++G + +A E    +       D  +YN+LIDG  K   LE
Sbjct: 600 EKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +    L  N++TY++++ G C +G+M +A  +   M E  + P+  T+  LI
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G +  +   +      +M +  ++PD
Sbjct: 720 NGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  ++ E++  G++ NV T N++++ LCK+ K +     L  M   GV  D  TYNTL++
Sbjct: 241 AWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLIN 300

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
            +C  G V  A +L  S  S G +  + +Y+ ++ G CK  + + A  +  EML  G+ P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +   +NTL V +     +  A ++FDEM R GV  D  ++ + I  L +NG++ +A+  F
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +       D   Y  LIDG C++G L  AL++   +       +VVTY+  + GLC  
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
                A  LF +M E  +VP+  TF  LIRG+ +     K + L   M   N+ PD    
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 453 SIVVDLLAK 461
           + ++D   K
Sbjct: 541 NTLIDGFCK 549



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 136/269 (50%)

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +++++    +  K+ E S    ++ + GV       N LL G   TG V+ A E++  + 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G +  V++ +I++N  CK+++ E  +   S+M  KG+  D+V +NTL         VE
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            AF+L +     G+     TY   + GLCK G    A ++   +  L    +   YN+L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
             +C+   +  A E+F  +    ++P++V++S +IG L  +G + +A   F +ME + +V
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKM 440
           P+ + + +LI GF R    S  +++  +M
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEM 458



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 125/256 (48%)

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y+ L+  +    ++    E F  +   G   ++ + + L+ G  +   ++ A  +Y E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             GI+ +V   N +   L +  + E       +M+  GV AD  TY T I+  C+ G + 
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA +L ++      E  +  YN+++ GLCK G+ + A ++   +    L PN  TY+ ++
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             +C    + +A+++F +M    V+P++++F  LI    R     + +    +M+   ++
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 447 PDASIVSIVVDLLAKN 462
           PD  I +I++D   +N
Sbjct: 430 PDNVIYTILIDGFCRN 445



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 115/237 (48%)

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y +L+  Y + K++      +  +  KG+   +   N L  GL     V+ A++++ E+ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G+  + +T    ++ LCK+      +     +       DI  YN+LI+  C+ G +E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L  S     + P ++TY+ ++ GLC  G+ D+A+D+ ++M +  + PN  T++ L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
               R +   +  E+  +M    V+PD    S ++ +LA+N     +L  F   E+ 
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 137/421 (32%), Positives = 220/421 (52%), Gaps = 43/421 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V++ +++KGLC   R      L  ++   GC P+V T+ TL+  LCR         +
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M +        C P+   Y T++DG+CKEG ++ A E+L +M    +KPNVV Y +V
Sbjct: 283 LAQMVDHG------CTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTV 336

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G C A+ W +A+ L  EM D     + VTFN+++D  C+NG +     LL+ M++HG 
Sbjct: 337 LKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGC 396

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY T+++GFC  G ++ A  L  SM + GC+    SY+I++ G C  +    A  
Sbjct: 397 VPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAED 456

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L S+M+ +G  P+ V  NT+   L +   VE+A +L  +M  NG + D  +Y T IDGL 
Sbjct: 457 LMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLG 516

Query: 321 KNGYIVEAVELFHTL--------------------------RILKCEFD------IRA-- 346
           K G   EA+EL + +                          R+++  FD      IR+  
Sbjct: 517 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQ-MFDNIQDVTIRSDA 575

Query: 347 --YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN++I  LCK G  + A+E    +     +PN  TY+I+I GL ++G + +A+++  +
Sbjct: 576 VLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTE 635

Query: 405 M 405
           +
Sbjct: 636 L 636



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 207/410 (50%), Gaps = 6/410 (1%)

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
           FGC+PDV +Y  ++ GLC         +L EEM        V C PN VT+ T+I  LC+
Sbjct: 219 FGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVR------VGCPPNVVTFNTLIGYLCR 272

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G  ++  ++L QM D    P++  Y +V+ G C       A  +   M   G++PNVV 
Sbjct: 273 NGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVC 332

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +N ++  LC   + ++A  LL  M  +    D  T+N L+D FC  G V    EL   M 
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML 392

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             GC   V +Y+ +ING+CK   I+ A+ L   M + G +P+ + +  +  GL    +  
Sbjct: 393 EHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWV 452

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A  L  +M   G + +  T+ T I+ LCK G + +A+EL   + +  C  D+ +Y+++I
Sbjct: 453 DAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVI 512

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DGL K+G+ + ALEL   +    + PN + YS +   L  +G++++   +F ++++  + 
Sbjct: 513 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIR 572

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            + + ++ +I    +     + IE L  M     MP+ S  +I++  LA 
Sbjct: 573 SDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLAS 622



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 219/446 (49%), Gaps = 11/446 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV---A 77
           P+A T+  +++ LCA  RI +A ++  ++R  GC P    Y  ++   C          A
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE-GFVDKAKELLLQMKDK-NIKPNVV 135
           + + +++ +G G     C  +      +++ +C + G VD+A  LL  +       P+VV
Sbjct: 173 VRVLQDL-HGRG-----CALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVV 226

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +Y +V++G C AK W   + L  EM+  G  PNVVTFN ++  LC+NG  +   ++L  M
Sbjct: 227 SYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQM 286

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           + HG  PD   Y T+LDG C  G +  A E+   M S G K  V  Y+ ++ G C  +  
Sbjct: 287 VDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERW 346

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E A  L +EM       D V  N L     +   V R  +L ++M  +G   D  TY T 
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTV 406

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I+G CK G I EAV L  ++    C  +  +Y  ++ GLC + R   A +L   +     
Sbjct: 407 INGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGC 466

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN VT++ +I  LC  G +++A +L   M  N   P++I++  +I G  +  +  + +E
Sbjct: 467 SPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALE 526

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAK 461
           LL+ M    + P+  I S +   L+K
Sbjct: 527 LLNVMVNKGMSPNTIIYSSIASALSK 552



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 183/361 (50%), Gaps = 6/361 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL +++    TPD   + +++ G+C E  +  A  +  ++  +G +P+V  Y T++ GLC
Sbjct: 282 VLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLC 341

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  A  L  EM + +      C  + VT+  ++D  C+ G V +  ELL QM +  
Sbjct: 342 SAERWEQAEELLAEMFDND------CPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHG 395

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+V+TYT+VI GFC     +EA  L   M   G +PN +++ +++  LC   +  +A 
Sbjct: 396 CVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAE 455

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L+  MI+ G  P+  T+NT+++  C  G V  A EL   M   GC   + SYS +I+G 
Sbjct: 456 DLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGL 515

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  + + AL L + M++KG+ P+ +I++++   L +  ++ R  ++FD +Q   + +D 
Sbjct: 516 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDA 575

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   I  LCK G    A+E    +    C  +   Y  LI GL   G ++ A E+   
Sbjct: 576 VLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTE 635

Query: 370 L 370
           L
Sbjct: 636 L 636



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 146/284 (51%), Gaps = 8/284 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VTF  L+   C    +     L  ++   GC PDV TYTT++NG C+      A+ L 
Sbjct: 364 DDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLL 423

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCK-EGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + MA         C PNT++YT ++ GLC  E +VD A++L+ QM ++   PN VT+ +V
Sbjct: 424 KSMA------ACGCRPNTISYTIVLKGLCSAERWVD-AEDLMSQMIEQGCSPNPVTFNTV 476

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      +A  L  +M+  G  P++++++ ++D L K GK DEA  LL++M+  G+
Sbjct: 477 INFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 536

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+   Y+++       GR+N   ++F +++ +  +     Y+ +I+  CK    + A+ 
Sbjct: 537 SPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIE 596

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
             + M+S G  P+   +  L  GL     V+ A ++  E+   G
Sbjct: 597 FLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 165/367 (44%), Gaps = 8/367 (2%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  ++ G C+ G +  A+ L   +    + PN  TY  V+R  C      +A  +  EM 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 162 DQGVQPNVVTFNVIMDELCKNGK---MDEASRLLDLMIQHGVRPDAFTYNTLLDGFC-LT 217
            +G  P    ++VI++  C  G       A R+L  +   G   D    N +L+  C   
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 218 GRVNHAKELFVSME-SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           G V+ A  L   +  S GC   V SY+ ++ G C  K       L  EM+  G  P+VV 
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            NTL   L      ER  ++  +M  +G   D   Y T +DG+CK G++  A E+   + 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + ++  YN+++ GLC + R E A EL   +       + VT++I++   C +G + 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +  +L   M E+  VP+VIT+  +I GF +     + + LL  M      P+    +IV+
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 457 DLLAKNE 463
             L   E
Sbjct: 443 KGLCSAE 449


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 141/441 (31%), Positives = 229/441 (51%), Gaps = 7/441 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+  LI  LC    + +A  +F ++R  G    V+ Y +L+NG C+  +   A  L
Sbjct: 368 PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGL 427

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM     E G+   P+  +Y+ +I GLC++G +  A EL  +M    +  NV T+T++
Sbjct: 428 LNEMV----EKGLA--PSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTL 481

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC   + +EA RLF +M+D  V PN VTFNV+++  C+ G + +A +L D M+  G+
Sbjct: 482 ISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD +TY +L+   CLT     AKE    +E+       FS + L+ G+CK   +     
Sbjct: 542 TPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ EM ++G+K D++    +     ++H  E+   LF EM+  GV  D   +   ID   
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHS 661

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   IV+A+  +  +    C  ++  Y  LI+ LCKSG L  A  L   +  G  +PN  
Sbjct: 662 KEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSF 721

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+  +  L N+G+++KA+ L   + E  +  N +TF+ LI+GF +  +    I+L+   
Sbjct: 722 TYNCFLDFLANEGELEKAKVLHATILEGCLA-NTVTFNTLIKGFCKAGQIQGAIDLMQNN 780

Query: 441 KEINVMPDASIVSIVVDLLAK 461
            E    PD    S +++ L K
Sbjct: 781 TESGFFPDCISYSTIINELCK 801



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 231/454 (50%), Gaps = 6/454 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L R+        AV +  L+ GLC  +R++EA  +   +   G   D  TY TLV G C
Sbjct: 217 LLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFC 276

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           RT    +AL + ++M        +   P+  + + ++DGL K G +DKA  L   + +  
Sbjct: 277 RTEELEMALEMTDDM------LSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELG 330

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + PN+    ++I   C  + + EA+RLF  M ++G++PN VT+ +++  LCK G MD+A 
Sbjct: 331 MVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDAL 390

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            + D M + G+R   + YN+L++G+C     + A+ L   M   G   +  SYS LI G 
Sbjct: 391 CMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGL 450

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+  ++  A+ L+ EM   G+  +V    TL  G  +   ++ A +LFD+M  + V  + 
Sbjct: 451 CRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNE 510

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            T+   I+G C+ G + +A +L+  +       D   Y SLI  LC +     A E    
Sbjct: 511 VTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDD 570

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           L    +V N  + + ++ G C +G++ +   ++ +M    V  ++I+F +++   +++++
Sbjct: 571 LENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHD 630

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             K+  L  +MKE  V PD    + ++D+ +K E
Sbjct: 631 GEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEE 664



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D + YT  +   C   +   A  L   M +     GV  + + V Y  ++ GLC+   V 
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESK----GV--KGSAVPYNVLMYGLCRNNRVL 247

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A E+   M ++ I  + VTY +++ GFC  ++   A  +  +M+     P+V + + ++
Sbjct: 248 EAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMV 307

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D L K G +D+A RL   + + G+ P+ F  N L+D  C   R   A+ LF  M + G +
Sbjct: 308 DGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLE 367

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +Y+ILI+  CK   ++ AL ++  M  KGI+  V  +N+L  G  +     +A  L
Sbjct: 368 PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGL 427

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            +EM   G+A    +Y   I GLC+ G +  A+EL   +       ++  + +LI G CK
Sbjct: 428 LNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCK 487

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G ++ A  LF  +    +VPN VT+++MI G C  G + KA  L+  M +  + P+  T
Sbjct: 488 DGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYT 547

Query: 417 FDMLI 421
           +  LI
Sbjct: 548 YRSLI 552



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 192/408 (47%), Gaps = 51/408 (12%)

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A++L  +M       +   YT+ IR +C  ++ + A+ L   M  +GV+ + V +NV+M 
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LC+N ++ EA  + + M++ G+  D  TY TL+ GFC T  +  A E+   M S+    
Sbjct: 239 GLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVP 298

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           +V S S +++G  K   I+ A  L   +   G+ P++   N L   L +  +   A +LF
Sbjct: 299 SVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLF 358

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID----- 352
             M   G+  +  TY   I  LCK G + +A+ +F  +R       +  YNSLI+     
Sbjct: 359 RGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQH 418

Query: 353 ------------------------------GLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
                                         GLC+ G L  A+EL R +    +  NV T+
Sbjct: 419 DNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTF 478

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + +I G C DG MD+A  LF  M +++VVPN +TF+++I G+ R+    K  +L  +M +
Sbjct: 479 TTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVD 538

Query: 443 INVMPD----ASIVSIV------------VDLLAKNEISLNSLPSFTV 474
             + PD     S++S++            VD L  N + LNS    T+
Sbjct: 539 RGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTL 586



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 200/431 (46%), Gaps = 42/431 (9%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +++    P A +++ LI GLC +  +  A  L  ++   G   +V+T+TTL++G C
Sbjct: 427 LLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFC 486

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +  +   A  LF++M + +    VV  PN VT+  +I+G C+ G V KA +L  QM D+ 
Sbjct: 487 KDGNMDEAARLFDKMIDSS----VV--PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG 540

Query: 130 IKPNVVTYTSVIR-----------------------------------GFCYAKDWNEAK 154
           + P+  TY S+I                                    GFC      E  
Sbjct: 541 LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETY 600

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            ++ EM  +GV+ ++++F VI+    K    ++ S L   M + GV+PD   +  ++D  
Sbjct: 601 HIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVH 660

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
                +  A   +  M + GC   V +Y++LIN  CK+  +  A  L  EML     P+ 
Sbjct: 661 SKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNS 720

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +N     L    ++E+A K+       G  A+T T+ T I G CK G I  A++L   
Sbjct: 721 FTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQN 779

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                   D  +Y+++I+ LCK G +  A +L+  +    L P++V Y+I+I      G+
Sbjct: 780 NTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGE 839

Query: 395 MDKARDLFLDM 405
            DK   ++ DM
Sbjct: 840 FDKGLGIYSDM 850



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 166/350 (47%), Gaps = 42/350 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +  +++ S   P+ VTF  +I+G C    + +A  L+ ++   G  PD +TY
Sbjct: 489 GNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTY 548

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++ LC T   + A    +++ N      VV   N+ + TT++ G CKEG + +   +
Sbjct: 549 RSLISVLCLTLGAMKAKEFVDDLENN----CVVL--NSFSLTTLMYGFCKEGRLTETYHI 602

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ--------------- 166
             +M+ + +K +++++T ++       D  +   LF EM ++GV+               
Sbjct: 603 WDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSK 662

Query: 167 --------------------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
                               PNVVT+ V+++ LCK+G +  A  L + M+     P++FT
Sbjct: 663 EENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFT 722

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YN  LD     G +  AK L  ++   GC     +++ LI G+CK  +I+GA+ L     
Sbjct: 723 YNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNT 781

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
             G  PD + ++T+   L ++  + +AF+L++EM   G+  D   Y   I
Sbjct: 782 ESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI 831



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 150/315 (47%), Gaps = 3/315 (0%)

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           A+D  +  RL    +  G+     T + I+  L K  +   A  L D M+Q     D + 
Sbjct: 141 ARDAADVLRL---SLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYV 197

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y   +  +C    ++ A+ L   MES G K +   Y++L+ G C+N  +  A+ + + M+
Sbjct: 198 YTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMV 257

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +GI  D V + TL  G     ++E A ++ D+M          +    +DGL K G+I 
Sbjct: 258 ERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHID 317

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A  L   L  L    ++ A N+LID LCK  R   A  LFR +    L PN VTY+I+I
Sbjct: 318 KAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILI 377

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             LC  G MD A  +F  M E  +   V  ++ LI G+ + +   +   LL++M E  + 
Sbjct: 378 HSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLA 437

Query: 447 PDASIVSIVVDLLAK 461
           P A+  S ++  L +
Sbjct: 438 PSAASYSPLIAGLCR 452



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 149/294 (50%), Gaps = 9/294 (3%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           +C   ++ + T+L+ G C E R+ E   ++ ++R  G + D+ ++T +V    +      
Sbjct: 574 NCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEK 633

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
              LF EM     E GV  +P+ V +T +ID   KE  + +A     +M      PNVVT
Sbjct: 634 ISVLFREMK----EKGV--KPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVT 687

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           YT +I   C +   + A+ L  EM+     PN  T+N  +D L   G++++A ++L   I
Sbjct: 688 YTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATI 746

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G   +  T+NTL+ GFC  G++  A +L  +    G      SYS +IN  CK  +I 
Sbjct: 747 LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDIN 806

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH-QVERAFKLFDEMQRNGVAADT 309
            A  L++EML KG+KPD+V +N L +    IH + ++   ++ +M     A DT
Sbjct: 807 KAFQLWNEMLYKGLKPDIVAYNIL-IRWCNIHGEFDKGLGIYSDMVNLKYADDT 859



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 9/278 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++  + +   +       D ++FT ++          + + LF +++  G +PD   +
Sbjct: 594 GRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFH 653

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           T +++   +  + + ALN +++M A+G       C PN VTYT +I+ LCK G++  A+ 
Sbjct: 654 TCMIDVHSKEENIVQALNCWDKMIADG-------CSPNVVTYTVLINHLCKSGYLSSAQI 706

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M      PN  TY   +       +  +AK L   ++ +G   N VTFN ++   C
Sbjct: 707 LCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL-EGCLANTVTFNTLIKGFC 765

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++  A  L+    + G  PD  +Y+T+++  C  G +N A +L+  M   G K  + 
Sbjct: 766 KAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIV 825

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           +Y+ILI     + E +  L +YS+M++     D  +++
Sbjct: 826 AYNILIRWCNIHGEFDKGLGIYSDMVNLKYADDTPVNH 863



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 111/254 (43%)

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           R   A ++     S G     ++ S ++    K ++   A  L+ EM+      D  ++ 
Sbjct: 140 RARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYT 199

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
                  EI  ++ A  L   M+  GV      Y   + GLC+N  ++EAVE+ +++   
Sbjct: 200 AGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVER 259

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
               D   Y +L+ G C++  LE+ALE+   +     VP+V + S M+ GL   G +DKA
Sbjct: 260 GIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKA 319

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             L   + E  +VPN+   + LI    +     +   L   M    + P+    +I++  
Sbjct: 320 FRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHS 379

Query: 459 LAKNEISLNSLPSF 472
           L K  +  ++L  F
Sbjct: 380 LCKRGMMDDALCMF 393


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 237/454 (52%), Gaps = 11/454 (2%)

Query: 13  RILKS---CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           R+LKS   C + +A    SL+ GL     +  A  ++ ++   G + +V+T   ++N LC
Sbjct: 208 RVLKSKGLCVSINACN--SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALC 265

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +        +   +M     E GV   P+ VTY T+I+  C++G +++A EL+  M  K 
Sbjct: 266 KNQKIENTKSFLSDME----EKGVF--PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +KP V TY ++I G C    +  AK +  EM+  G+ P+  T+N+++ E C+N  M +A 
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           R+ D M   GV PD  +++ L+      G ++ A + F  M++ G       Y+ILI G+
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+N  +  AL +  EML +G   DVV +NT+  GL +   +  A +LF EM   GV  D 
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +T+ T I+G  K+G + +AV LF  +     + D+  YN+LIDG CK   +E   EL+  
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + PN ++Y I+I G CN G + +A  L+ +M E      +IT + +++G+ R   
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             K  E L  M    ++PD    + +++   K E
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 653



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 230/447 (51%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++  +      P   T+ ++I GLC   + + A  +  ++   G  PD  TY
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+   CR  + + A  +F+EM +     GVV  P+ V+++ +I  L K G +D+A + 
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQ----GVV--PDLVSFSALIGLLSKNGCLDQALKY 416

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              MK+  + P+ V YT +I GFC     +EA ++  EM++QG   +VVT+N I++ LCK
Sbjct: 417 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 476

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + EA  L   M + GV PD +T+ TL++G+   G +N A  LF  M     K  V +
Sbjct: 477 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 536

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+CK  E+E    L+++M+S+ I P+ + +  L  G   +  V  AF+L+DEM 
Sbjct: 537 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 596

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G  A   T  T + G C+ G  V+A E    + +     D   YN+LI+G  K   ++
Sbjct: 597 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 656

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +    L+P+V+TY++++ G    G+M +A  + L M E  V P+  T+  LI
Sbjct: 657 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G +  N   +   +  +M +   +PD
Sbjct: 717 NGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 245/458 (53%), Gaps = 11/458 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ +LI   C +  + EA  L   +   G +P VFTY  ++NGLC+T   + A  +
Sbjct: 287 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 346

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM        +   P+T TY  ++   C+   +  A+ +  +M  + + P++V+++++
Sbjct: 347 LDEM------LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL 400

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I         ++A + F +M + G+ P+ V + +++   C+NG M EA ++ D M++ G 
Sbjct: 401 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 460

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D  TYNT+L+G C    ++ A ELF  M   G     ++++ LINGY K+  +  A++
Sbjct: 461 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 520

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+  M+ + +KPDVV +NTL  G  +  ++E+  +L+++M    +  +  +Y   I+G C
Sbjct: 521 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 580

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G + EA  L+  +     E  I   N+++ G C++G    A E   ++    +VP+ +
Sbjct: 581 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 640

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I G   +  MD+A  L   ME + ++P+VIT+++++ GF R     +   ++ KM
Sbjct: 641 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 700

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLP-SFTVHEQ 477
            E  V PD S  + +++      ++ N+L  +F VH++
Sbjct: 701 IERGVNPDRSTYTSLIN----GHVTQNNLKEAFRVHDE 734



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 183/367 (49%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C  N + +  ++    +   + +  E    +K K +  ++    S++ G       + A 
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 239

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            ++ E++  GVQ NV T N++++ LCKN K++     L  M + GV PD  TYNTL++ +
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G +  A EL  SM   G K  VF+Y+ +ING CK  +   A  +  EML  G+ PD 
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +N L V       +  A ++FDEM   GV  D  ++   I  L KNG + +A++ F  
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 419

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           ++      D   Y  LI G C++G +  AL++   +     V +VVTY+ ++ GLC +  
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           + +A +LF +M E  V P+  TF  LI G+ +    +K + L   M + N+ PD    + 
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539

Query: 455 VVDLLAK 461
           ++D   K
Sbjct: 540 LIDGFCK 546



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 171/334 (51%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N   N + +  ++R +  A+   E    F  +  +G+  ++   N ++  L K G +D A
Sbjct: 179 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 238

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             +   +++ GV+ + +T N +++  C   ++ + K     ME  G    V +Y+ LIN 
Sbjct: 239 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           YC+   +E A  L   M  KG+KP V  +N +  GL +  +  RA  + DEM + G++ D
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T TY   +   C+N  +++A  +F  +       D+ ++++LI  L K+G L+ AL+ FR
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L P+ V Y+I+IGG C +G M +A  +  +M E   V +V+T++ ++ G  +  
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             S+  EL  +M E  V PD    + +++  +K+
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 512



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N + F++++    +  K+ E      ++   G+       N+LL G    G V+ A E++
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             +   G +  V++ +I+IN  CKN++IE   S  S+M  KG+ PDVV +NTL       
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             +E AF+L D M   G+    +TY   I+GLCK G  + A  +   +  +    D   Y
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N L+   C++  +  A  +F  +P   +VP++V++S +IG L  +G +D+A   F DM+ 
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             + P+ + + +LI GF R    S+ +++  +M E   + D    + +++ L K ++
Sbjct: 423 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 89/168 (52%), Gaps = 6/168 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG VS  F +   +++  F    +T  +++KG C     ++A    + + + G  PD  T
Sbjct: 582 MGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 641

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG  +  +   A  L  +M N     G++  P+ +TY  I++G  ++G + +A+ 
Sbjct: 642 YNTLINGFIKEENMDRAFALVNKMENS----GLL--PDVITYNVILNGFSRQGRMQEAEL 695

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           ++L+M ++ + P+  TYTS+I G     +  EA R+  EM+ +G  P+
Sbjct: 696 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 222/407 (54%), Gaps = 7/407 (1%)

Query: 15  LKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +KSC  +PD  T++ LI G C +  + +   L  +++    EP + +Y++L +GLC+   
Sbjct: 351 MKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRL 410

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
           + ++L++F ++     ++      +   Y+ +I G C +G +D A +L+ +M   N+ P+
Sbjct: 411 SDISLDIFRDLGAAGYKY------DQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPD 464

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
              + S++ GFC    W  A   F  M++ G+ P++ T NVI+D  C+ G+++EA  L++
Sbjct: 465 PSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMN 524

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G+ P+ FTYN +++  C   +   A ELF  M       +V  YS LI+G+ K  
Sbjct: 525 EMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQS 584

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
             + AL LY+ ML  G+ PD+V +  L   L    ++  A+ LF +M  NG+  D  +Y 
Sbjct: 585 NSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYT 644

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I G C+ G + +A  LF+ +        +  Y SL+DG CK  R++IA  L   +   
Sbjct: 645 SVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRK 704

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            + P+VVTY+++I      G +DKA ++  +M+EN V+P+ +T+ ML
Sbjct: 705 GITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 217/423 (51%), Gaps = 6/423 (1%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           + ++I GLC +  + EA  +  +++  G  PDV+TY+ L++G C+       L L EEM 
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
             N       EP+ V+Y+++  GLCK+   D + ++   +     K +   Y+ +I+GFC
Sbjct: 388 YSN------MEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFC 441

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
              D + A +L  EM+   + P+   F  ++   CK G    A    ++M++ G+ P   
Sbjct: 442 MQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIA 501

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T N ++D  C  GRV  A  L   M++ G    +F+Y+ +IN  CK ++ E AL L+  M
Sbjct: 502 TCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLM 561

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L + + P VV+++TL  G  +    ++A  L+  M + GV  D   Y   I+ LC    +
Sbjct: 562 LKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRM 621

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA  LF  +       D  +Y S+I G C+ G +  A  LF  +     +P VVTY+ +
Sbjct: 622 CEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSL 681

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + G C   ++D A  L  +M+   + P+V+T+++LI    R     K +E+L++MKE  V
Sbjct: 682 VDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGV 741

Query: 446 MPD 448
           +PD
Sbjct: 742 LPD 744



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 220/444 (49%), Gaps = 14/444 (3%)

Query: 21  PDAVTFTSLIKGLC------AESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           P+  T+T ++   C      A+    +A  +  ++   G  P V TY+T + GLCR  + 
Sbjct: 247 PNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYV 306

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             AL+    + + NG   V C      Y  II GLCK+G +D+A ++L +MK   I P+V
Sbjct: 307 ESALDFVRSLISANGLVNVYC------YNAIIHGLCKKGELDEALKVLEEMKSCGISPDV 360

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
            TY+ +I GFC   D  +   L  EM    ++P++V+++ +   LCK    D +  +   
Sbjct: 361 YTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRD 420

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           +   G + D   Y+ L+ GFC+ G ++ A +L   M          ++  L++G+CK   
Sbjct: 421 LGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGL 480

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
              AL  ++ ML  GI P +   N +        +VE A  L +EMQ  G+  + +TY  
Sbjct: 481 WVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNA 540

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCG 373
            I+ LCK      A+ELF  +        +  Y++LIDG  K    + AL L+ R L  G
Sbjct: 541 VINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIG 600

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
           V  P++V Y+I+I  LC+  +M +A +LF  M EN + P+ I++  +I GF RI +  K 
Sbjct: 601 V-TPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKA 659

Query: 434 IELLHKMKEINVMPDASIVSIVVD 457
             L ++M +   +P     + +VD
Sbjct: 660 WALFNEMLQRGHLPTVVTYTSLVD 683



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 217/442 (49%), Gaps = 12/442 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           + F  LIK   A S +  A  +F + +  G E    +   L+  L   +      +LFEE
Sbjct: 180 IVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEE 239

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGF------VDKAKELLLQMKDKNIKPNVVTY 137
           M +          PN  TYT +++  CK  F        +A E+L +M+     P VVTY
Sbjct: 240 MKSTGPP------PNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           ++ I G C       A      ++      NV  +N I+  LCK G++DEA ++L+ M  
Sbjct: 294 STYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKS 353

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ PD +TY+ L+ GFC  G V     L   M+    + ++ SYS L +G CK +  + 
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           +L ++ ++ + G K D   ++ L  G      ++ A KL +EM RN +A D   + + + 
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVH 473

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G CK G  V A+E F+ +        I   N +ID  C+ GR+E AL L   +    + P
Sbjct: 474 GFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFP 533

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           N+ TY+ +I  LC + + ++A +LF  M +  V+P+V+ +  LI GF + +   K + L 
Sbjct: 534 NLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLY 593

Query: 438 HKMKEINVMPDASIVSIVVDLL 459
            +M +I V PD    +I++++L
Sbjct: 594 ARMLKIGVTPDMVAYTILINIL 615



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 177/357 (49%), Gaps = 6/357 (1%)

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAK------DWNEAKRLFIEMMDQGVQPNVVTF 172
           + L  +MK     PNV TYT ++  +C         D  +A  +  EM   G  P VVT+
Sbjct: 234 RSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           +  +  LC+ G ++ A   +  +I      + + YN ++ G C  G ++ A ++   M+S
Sbjct: 294 STYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKS 353

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G    V++YSILI+G+CK  ++E  L L  EM    ++P +V +++LF GL +    + 
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           +  +F ++   G   D   Y   I G C  G +  A +L   +       D   + SL+ 
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVH 473

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G CK G    ALE F  +  G ++P++ T +++I   C +G++++A +L  +M+   + P
Sbjct: 474 GFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFP 533

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           N+ T++ +I    +  +  + +EL   M + NV+P   + S ++D  AK   S  +L
Sbjct: 534 NLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 16/278 (5%)

Query: 6   HGFVVLG----------RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HGF  +G           +L+    P   T   +I   C E R+ EA  L  +++  G  
Sbjct: 473 HGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIF 532

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P++FTY  ++N LC+   +  AL LF  M   N        P+ V Y+T+IDG  K+   
Sbjct: 533 PNLFTYNAVINRLCKERKSERALELFPLMLKRN------VLPSVVVYSTLIDGFAKQSNS 586

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            KA  L  +M    + P++V YT +I   C+     EA  LF +M + G+ P+ +++  +
Sbjct: 587 QKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSV 646

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +   C+ G M +A  L + M+Q G  P   TY +L+DG+C   R++ A  L   M+  G 
Sbjct: 647 IAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGI 706

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
              V +Y++LI  + +   ++ AL + +EM   G+ PD
Sbjct: 707 TPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 150/339 (44%), Gaps = 9/339 (2%)

Query: 145 CYAKDWN-EAKRLFIEMMD--QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           CY    N +A  LF  +++  +    +V+ F++++     N  ++ A  +     + G+ 
Sbjct: 152 CYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLE 211

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK------EI 255
               + N LL       R    + LF  M+S G    VF+Y+I++N YCK        + 
Sbjct: 212 LSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDT 271

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  +  EM   G  P VV ++T   GL  +  VE A      +       + + Y   
Sbjct: 272 RQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAI 331

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I GLCK G + EA+++   ++      D+  Y+ LI G CK G +E  L L   +    +
Sbjct: 332 IHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNM 391

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P++V+YS +  GLC     D + D+F D+       +   + +LI+GF    +     +
Sbjct: 392 EPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHK 451

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
           L+ +M   N+ PD S    +V    K  + +N+L  F +
Sbjct: 452 LMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNM 490



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   + +   +L+    P  VT+TSL+ G C  +RI  A  L  +++  G  PDV T
Sbjct: 653 IGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVT 712

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTY 102
           Y  L+    R  +   AL +  EM     E GV+  P+ +TY
Sbjct: 713 YNVLIAAHRRRGNLDKALEMLNEMK----ENGVL--PDHMTY 748


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 224/451 (49%), Gaps = 9/451 (1%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTYTTLVN 66
            V   +L+    P  VT+ +L+     E R  + A L  ++  R  GC P+  T+  ++ 
Sbjct: 223 AVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVIT 282

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GL R      A  + E M        +  + ++ TY  +I GL  +GFV KA +L L+M+
Sbjct: 283 GLARKGDLEEAAEMVEGMR-------LSKKASSFTYNPLITGLLAKGFVKKADDLQLEME 335

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++ I P VVTY ++I G   +     A+  F+EM   G+QP+V+T+N +++  CK G + 
Sbjct: 336 NEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLK 395

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA  L   +   G+ P   TYN L+DG+C  G +  A+ L   M   GC   V +Y+IL+
Sbjct: 396 EALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILM 455

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G      +  A   + EMLSKG++PD   +NT       +  + +AF+L + M   G++
Sbjct: 456 KGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGIS 515

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           +DT TY   IDGLCK G + +A +L   +     + D   Y  LI   C+ G L  A + 
Sbjct: 516 SDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKF 575

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F+ +    L P+ VTY++ I   C  G +  A   F  M E  V PN IT+++LI    R
Sbjct: 576 FKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 635

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVD 457
                      H+M E  ++P+    ++++D
Sbjct: 636 TGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 217/443 (48%), Gaps = 7/443 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD      +++ L   +R  +  A+  ++   G EP + TY TL++   +         
Sbjct: 199 APDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAM 258

Query: 80  LFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           L +EM   G+G     C PN VT+  +I GL ++G +++A E++  M+    K +  TY 
Sbjct: 259 LLKEMETRGSG-----CLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-KASSFTYN 312

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G        +A  L +EM ++G+ P VVT+N ++  L ++G+++ A      M   
Sbjct: 313 PLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAM 372

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G++PD  TYN+LL+G+C  G +  A  LF  +   G   TV +Y+ILI+GYC+  ++E A
Sbjct: 373 GLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEA 432

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L  EM+ +G  PDV  +  L  G      +  A + FDEM   G+  D + Y T I  
Sbjct: 433 RRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRA 492

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
               G I +A  L   + +     D   YN LIDGLCK+G L  A +L   +    L P+
Sbjct: 493 ELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPD 552

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            +TY+ +I   C  G + +AR  F DM  + + P+ +T+ + I  + R            
Sbjct: 553 CITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFR 612

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
           KM E  V P+    ++++  L +
Sbjct: 613 KMLEEGVEPNEITYNVLIHALCR 635



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 197/402 (49%), Gaps = 6/402 (1%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           + T+  LI GL A+  + +A  L  ++   G  P V TY  +++GL ++     A   F 
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           EM        +  +P+ +TY ++++G CK G + +A  L   ++   + P V+TY  +I 
Sbjct: 368 EMR------AMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILID 421

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+C   D  EA+RL  EM++QG  P+V T+ ++M        +  A    D M+  G++P
Sbjct: 422 GYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQP 481

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D F YNT +      G +  A  L   M   G      +Y+ILI+G CK   +  A  L 
Sbjct: 482 DCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQ 541

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M+  G++PD + +  L     E   +  A K F +M  +G+A    TY  FI   C+ 
Sbjct: 542 MKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRR 601

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G +  A   F  +     E +   YN LI  LC++GR ++A   F  +    LVPN  TY
Sbjct: 602 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTY 661

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +++I G C +G  + A   + +M +N + P+ +T   L +GF
Sbjct: 662 TLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 193/391 (49%), Gaps = 11/391 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+ ++I GL    ++  A   F ++R  G +PDV TY +L+NG C+      AL L
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F ++ +          P  +TY  +IDG C+ G +++A+ L  +M ++   P+V TYT +
Sbjct: 401 FGDLRHAG------LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTIL 454

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G   A     A+  F EM+ +G+QP+   +N  +      G + +A RL ++M+  G+
Sbjct: 455 MKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGI 514

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D  TYN L+DG C TG +N AK+L + M   G +    +Y+ LI+ +C+   +  A  
Sbjct: 515 SSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARK 574

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            + +M+S G+ P  V +            +  A+  F +M   GV  +  TY   I  LC
Sbjct: 575 FFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 634

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G    A   FH +       +   Y  LIDG CK G  E A+  +  +    + P+ +
Sbjct: 635 RTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYL 694

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           T+  +  G  ++G M+ A    ++  ENAV+
Sbjct: 695 THKALFKGF-DEGHMNHA----IEYLENAVL 720



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 29/316 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    ++ G +  +   P  +T+  LI G C    + EA  L  ++   GC PDV TY
Sbjct: 392 GSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTY 451

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGE---------------FGVVCEP--------- 97
           T L+ G        +A   F+EM +   +                G + +          
Sbjct: 452 TILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMML 511

Query: 98  -----NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                +TVTY  +IDGLCK G ++ AK+L ++M    ++P+ +TYT +I   C      E
Sbjct: 512 EGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLRE 571

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A++ F +M+  G+ P+ VT+ V +   C+ G +  A      M++ GV P+  TYN L+ 
Sbjct: 572 ARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 631

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C TGR   A   F  M   G     ++Y++LI+G CK    E A+  Y EM   GI P
Sbjct: 632 ALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHP 691

Query: 273 DVVIHNTLFVGLFEIH 288
           D + H  LF G  E H
Sbjct: 692 DYLTHKALFKGFDEGH 707



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 167/340 (49%), Gaps = 3/340 (0%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M    + P+V     V+R    A  W++   +  EM+  G++P++VT+N ++D   K G
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251

Query: 184 KMDEASRLLDLMIQH--GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + D+ + LL  M     G  P+  T+N ++ G    G +  A E+   M  +  K + F+
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-LSKKASSFT 310

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G      ++ A  L  EM ++GI P VV +N +  GL +  QVE A   F EM+
Sbjct: 311 YNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMR 370

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  TY + ++G CK G + EA+ LF  LR       +  YN LIDG C+ G LE
Sbjct: 371 AMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLE 430

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +     +P+V TY+I++ G  N   +  AR+ F +M    + P+   ++  I
Sbjct: 431 EARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRI 490

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           R  + +   +K   L   M    +  D    +I++D L K
Sbjct: 491 RAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCK 530



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 5/295 (1%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F EM   GV P+V   N ++  L    + D+   +   M+Q G+ P   TYNTLLD F  
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 217 TGRVNHAKELFVSMESM--GCKHTVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPD 273
            GR +    L   ME+   GC     +++++I G  +  ++E A  +   M LSK  K  
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK--KAS 307

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +N L  GL     V++A  L  EM+  G+     TY   I GL ++G +  A   F 
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R +  + D+  YNSL++G CK+G L+ AL LF  L    L P V+TY+I+I G C  G
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLG 427

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +++AR L  +M E   +P+V T+ +L++G       +   E   +M    + PD
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPD 482



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 7/225 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G ++  F +   ++    + D VT+  LI GLC    + +A  L  K+   G +PD  T
Sbjct: 496 LGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCIT 555

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++  C       A   F++M +          P+ VTYT  I   C+ G +  A  
Sbjct: 556 YTCLIHAHCERGLLREARKFFKDMISDG------LAPSAVTYTVFIHAYCRRGNLYSAYG 609

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M ++ ++PN +TY  +I   C       A R F EM+++G+ PN  T+ +++D  C
Sbjct: 610 WFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNC 669

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           K G  ++A R    M Q+G+ PD  T+  L  GF   G +NHA E
Sbjct: 670 KEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHAIE 713


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 229/461 (49%), Gaps = 10/461 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      +L  + +    PDAV + ++I  L A+  + EAA L  ++ + GC  DV T
Sbjct: 190 LGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNT 249

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  LV GLC       A  L + M          C P+ VTY  ++ GLC+    D+A  
Sbjct: 250 FNDLVLGLCGLGRVREAARLVDRMMTQG------CMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L ++ + N    VV   +VIRG         A  L+  M  +G  P+V T++++M  LC
Sbjct: 304 MLGRLPEVN----VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+   A R+LD M + G  P+  TY+TLL  FC  G  + A+ +   M + G      
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ +I   CK+ +++ A  L  EM S+G KPD+  +NT+   L     +E A  +F  +
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV A+  TY T I  L +NG   E + L   + +  C+ D+ +YN LI  LCK G +
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNV 539

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + ++ L   +    + PN  +Y+++I  LC  G++  A +L  +M    + P+++T++ L
Sbjct: 540 DRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 599

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I G  ++      + LL K+   NV PD    +I++    K
Sbjct: 600 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCK 640



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 229/465 (49%), Gaps = 10/465 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+   ++L  +L      D  TF  L+ GLC   R+ EAA L  ++   GC P V TY
Sbjct: 226 GGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTY 285

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLCRT     A  +           G + E N V   T+I G   EG + +A EL
Sbjct: 286 GFLLQGLCRTRQADEACAML----------GRLPEVNVVMLNTVIRGCLTEGKLARATEL 335

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  K   P+V TY+ ++ G C    +  A R+  EM ++G  PN+VT++ ++   C+
Sbjct: 336 YEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCR 395

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG  D+A  +LD M+  G   ++  YN ++   C  G+++ A  L   M+S GCK  + +
Sbjct: 396 NGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICT 455

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I   C N  +E A  ++  ++ +G+  + + +NTL   L    + +   +L  EM 
Sbjct: 456 YNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEML 515

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   D  +Y   I  LCK G +  ++ L   +     + +  +YN LI+ LCK+G++ 
Sbjct: 516 LHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVR 575

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALEL + +    L P++VTY+ +I GLC  G    A +L   +    V P+++T+++LI
Sbjct: 576 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 635

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
               ++        LL K     ++P+     ++V    +  ++L
Sbjct: 636 SWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQTVNL 680



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 214/460 (46%), Gaps = 12/460 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR  H    + R  +   +P   ++  ++  L       +A  L+ ++      P  FT+
Sbjct: 123 GRALHLLDQMPR--RFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTF 180

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
                 LCR      AL L   MA         C P+ V Y T+I  L  +G V +A  L
Sbjct: 181 GVAARALCRLGRAGDALALLRGMARHG------CVPDAVLYQTVIHALVAQGGVAEAAML 234

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M       +V T+  ++ G C      EA RL   MM QG  P+VVT+  ++  LC+
Sbjct: 235 LDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCR 294

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             + DEA  +L  + +  V       NT++ G    G++  A EL+  M S GC   V +
Sbjct: 295 TRQADEACAMLGRLPEVNV----VMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHT 350

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL++G CK      A+ +  EM  KG  P++V ++TL          + A  + D+M 
Sbjct: 351 YSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQML 410

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G + ++  Y   I  LCK+G + +A  L   ++   C+ DI  YN++I  LC +  +E
Sbjct: 411 AKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLME 470

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +FR+L    +V N +TY+ +I  L  +G+  +   L  +M  +    +VI+++ LI
Sbjct: 471 EAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLI 530

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +   +     + + LL +M    + P+    +++++ L K
Sbjct: 531 KALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCK 570


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 137/402 (34%), Positives = 214/402 (53%), Gaps = 6/402 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +F  +IKG C    I ++  L  +LR FG  P+V  YTTL++G C+      A +LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM    G+FG+V   N  TYT +I GL K G   +  E+  +M++  + PN+ TY  V+
Sbjct: 222 FEM----GKFGLVA--NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C      +A ++F EM ++GV  N+VT+N ++  LC+  K +EA+ ++D M   G+ 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TYNTL+DGFC   ++  A  L   ++S G   ++ +Y+IL++G+CK  +  GA  +
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM  +GIKP  V +  L         +E+A +L   M+  G+  D  TY   I G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA  LF ++   K E +   YN+++ G CK G    AL LFR +    L PNV +
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           Y  MI  LC + +  +A  L   M ++ + P+    +++ R 
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 235/453 (51%), Gaps = 13/453 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALF--TKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           F P +  F +L+  +   S   +    F  +K++V     DV+++  ++ G C       
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVV---LDVYSFGIVIKGCCEAGEIEK 181

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           + +L  E+     EFG    PN V YTT+IDG CK+G ++KAK+L  +M    +  N  T
Sbjct: 182 SFDLLVELR----EFGF--SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWT 235

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           YT +I G        +   ++ +M + GV PN+ T+N +M++LCK+G+  +A ++ D M 
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMR 295

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + GV  +  TYNTL+ G C   + N A E+   M+S G    + +Y+ LI+G+C  +++ 
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLG 355

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            ALSL  ++ S+G+ P +V +N L  G  +      A K+  EM+  G+     TY   I
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILI 415

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D   ++  + +A++L  ++  L    D+  Y+ LI G C  GR+  A  LF+S+      
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFE 475

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN V Y+ M+ G C +G   +A  LF +MEE  + PNV ++  +I    +  +  +   L
Sbjct: 476 PNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGL 535

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + KM +  + P  SI++++    AKN+    S+
Sbjct: 536 VEKMIDSGIGPSDSILNLISR--AKNDSHSRSM 566



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 184/362 (50%), Gaps = 41/362 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  + +  F+P+ V +T+LI G C +  I +A  LF ++  FG   + +TY
Sbjct: 177 GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTY 236

Query: 62  TTLVNG-----------------------------------LCRTSHTIVALNLFEEMAN 86
           T L++G                                   LC+   T  A  +F+EM  
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMR- 295

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
              E GV C  N VTY T+I GLC+E   ++A E++ QMK   I PN++TY ++I GFC 
Sbjct: 296 ---ERGVSC--NIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCG 350

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
            +   +A  L  ++  +G+ P++VT+N+++   CK G    A +++  M + G++P   T
Sbjct: 351 VRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVT 410

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  L+D F  +  +  A +L  SME +G    V +YS+LI+G+C    +  A  L+  M+
Sbjct: 411 YTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMV 470

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            K  +P+ VI+NT+ +G  +     RA +LF EM+   +  +  +YR  I+ LCK     
Sbjct: 471 EKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSK 530

Query: 327 EA 328
           EA
Sbjct: 531 EA 532



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 183/386 (47%), Gaps = 34/386 (8%)

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           +I G  +  F   +  L    + +  K     Y  +I  +  ++  + +   F EM+D+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 165 VQP----------------------------------NVVTFNVIMDELCKNGKMDEASR 190
             P                                  +V +F +++   C+ G+++++  
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFD 184

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           LL  + + G  P+   Y TL+DG C  G +  AK+LF  M   G     ++Y++LI+G  
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           KN   +    +Y +M   G+ P++  +N +   L +  + + AFK+FDEM+  GV+ +  
Sbjct: 245 KNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIV 304

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY T I GLC+     EA E+   ++      ++  YN+LIDG C   +L  AL L R L
Sbjct: 305 TYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDL 364

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               L P++VTY+I++ G C  G    A  +  +MEE  + P+ +T+ +LI  F R +  
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNM 424

Query: 431 SKVIELLHKMKEINVMPDASIVSIVV 456
            K I+L   M+E+ + PD    S+++
Sbjct: 425 EKAIQLRSSMEELGLTPDVHTYSVLI 450



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 175/350 (50%), Gaps = 6/350 (1%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +V ++  VI+G C A +  ++  L +E+ + G  PNVV +  ++D  CK G++++A  L 
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M + G+  + +TY  L+ G    G      E++  M+  G    + +Y+ ++N  CK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
              + A  ++ EM  +G+  ++V +NTL  GL    +   A ++ D+M+ +G+  +  TY
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T IDG C    + +A+ L   L+       +  YN L+ G CK G    A ++ + +  
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINE 429
             + P+ VTY+I+I        M+KA  L   MEE  + P+V T+ +LI GF    R+NE
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNE 461

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
            S+   L   M E    P+  I + +V    K   S  +L  F   E++E
Sbjct: 462 ASR---LFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 115/250 (46%), Gaps = 34/250 (13%)

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKP----------------------------- 272
           Y ++IN Y +++ ++ ++  ++EM+ KG  P                             
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 273 -----DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
                DV     +  G  E  ++E++F L  E++  G + +   Y T IDG CK G I +
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A +LF  +       +   Y  LI GL K+G  +   E++  +    + PN+ TY+ ++ 
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMN 276

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC DG+   A  +F +M E  V  N++T++ LI G  R  + ++  E++ +MK   + P
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINP 336

Query: 448 DASIVSIVVD 457
           +    + ++D
Sbjct: 337 NLITYNTLID 346



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 10/89 (11%)

Query: 6   HGFVVLGRI----------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HGF + GR+          ++  F P+ V + +++ G C E     A  LF ++      
Sbjct: 451 HGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           P+V +Y  ++  LC+   +  A  L E+M
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKM 539


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 224/424 (52%), Gaps = 8/424 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P++V+++ LI GLC   R+ EA  L  ++   GC+P   TYT L+  LC       A N
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322

Query: 80  LFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           LF+EM A G       C+PN  TYT +IDGLC++G +++A  +  +M    I P+V+TY 
Sbjct: 323 LFDEMIARG-------CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I G+C       A  L   M  +  +PNV TFN +M+ LC+ GK  +A  LL  M+ +
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  +YN L+DG C  G +N A +L  SM S   +    +++ +IN +CK  + + A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            +    ML KGI  D V   TL  G+  + +   A  + + + +  +     +    +D 
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDM 555

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L K   + E + +   +  L     +  Y +L+DGL +SG +  +  +   +     +PN
Sbjct: 556 LSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPN 615

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V  Y+I+I GLC  G++++A  L   M+++ V PN +T+ ++++G++   +  + +E + 
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675

Query: 439 KMKE 442
            M E
Sbjct: 676 AMVE 679



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 229/449 (51%), Gaps = 12/449 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   F +  ++ +    P   T+T LIK LC    I +A  LF ++   GC+P+V T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHT 338

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++GLCR      A  +  +M   +G F     P+ +TY  +I+G CK+G V  A E
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVK-DGIF-----PSVITYNALINGYCKDGRVVPAFE 392

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M+ +  KPNV T+  ++ G C      +A  L   M+D G+ P++V++NV++D LC
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G M+ A +LL  M    + PD  T+  +++ FC  G+ + A      M   G      
Sbjct: 453 REGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + + LI+G C   +   AL +   ++   +       N +   L +  +++    +  ++
Sbjct: 513 TGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKI 572

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + G+     TY T +DGL ++G I  +  +   +++  C  ++  Y  +I+GLC+ GR+
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRV 632

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +L  ++    + PN VTY++M+ G  N+G++D+A +    M E     N   +  L
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692

Query: 421 IRGF------IRINEPSKVIELLHKMKEI 443
           +RGF      IR  +P  + EL+  ++++
Sbjct: 693 LRGFVLSQKGIRETDPECIKELISVVEQL 721



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 231/534 (43%), Gaps = 84/534 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +   ++     P+  T+T LI GLC + +I EA  +  K+   G  P V TY
Sbjct: 315 GLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITY 374

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+    + A  L   M          C+PN  T+  +++GLC+ G   KA  L
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKR------ACKPNVRTFNELMEGLCRVGKPYKAVHL 428

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D  + P++V+Y  +I G C     N A +L   M    ++P+ +TF  I++  CK
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCK 488

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN------------------HA 223
            GK D AS  L LM++ G+  D  T  TL+DG C  G+                    H+
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHS 548

Query: 224 KELFVSMESMGCK-----------------HTVFSYSILINGYCKNKEIEGALSLYSEML 266
             + + M S GCK                  +V +Y+ L++G  ++ +I G+  +   M 
Sbjct: 549 LNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMK 608

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G  P+V  +  +  GL +  +VE A KL   MQ +GV+ +  TY   + G   NG + 
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDG--------------------------------- 353
            A+E    +     E + R Y+SL+ G                                 
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGL 728

Query: 354 -------LCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
                  LCK GR + +  L ++ L  GV +   +   I++   C+  +  K  +L   +
Sbjct: 729 CIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAI--DIIMESYCSKKKHTKCVELITLV 786

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            ++  VP+  +F ++I+G  +  +  +  EL+ ++   N + + S V   V+ L
Sbjct: 787 LKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYVECL 840



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 224/465 (48%), Gaps = 12/465 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     V  +++K    P  +T+ +LI G C + R++ A  L T +    C+P+V T+
Sbjct: 350 GKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLCR      A++L + M + NG       P+ V+Y  +IDGLC+EG ++ A +L
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLD-NG-----LSPDIVSYNVLIDGLCREGHMNVAYKL 463

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M   +++P+ +T+T++I  FC     + A      M+ +G+  + VT   ++D +C 
Sbjct: 464 LTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCN 523

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK  +A  +L+ +++  +     + N +LD      ++     +   +  +G   +V +
Sbjct: 524 VGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVT 583

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G  ++ +I G+  +   M   G  P+V  +  +  GL +  +VE A KL   MQ
Sbjct: 584 YTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG--LCKSGR 359
            +GV+ +  TY   + G   NG +  A+E    +     E + R Y+SL+ G  L + G 
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGI 703

Query: 360 LEIALELFRSLPCGVLVPNVVTYSI---MIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            E   E  + L   V      T  +   ++  LC +G+ D++  L   + ++ V      
Sbjct: 704 RETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEK-A 762

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            D+++  +    + +K +EL+  + +   +P      +V+  L K
Sbjct: 763 IDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKK 807



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 151/307 (49%), Gaps = 1/307 (0%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           +  M   G    ++ +  I++ LCKNG  + A   +  +++ G   D+    +LL GFC 
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCR 242

Query: 217 TGRVNHAKELFVSMESMG-CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
              +  A ++F  M   G C     SYSILI+G C+   +E A  L  +M  KG +P   
Sbjct: 243 GLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +  L   L +   +++AF LFDEM   G   +  TY   IDGLC++G I EA  +   +
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                   +  YN+LI+G CK GR+  A EL   +      PNV T++ ++ GLC  G+ 
Sbjct: 363 VKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            KA  L   M +N + P+++++++LI G  R    +   +LL  M   ++ PD    + +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAI 482

Query: 456 VDLLAKN 462
           ++   K 
Sbjct: 483 INAFCKQ 489



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 7/246 (2%)

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIHNT 279
           N   +L VS       H V    I     C+ KE+   +S + E+    G + +   +++
Sbjct: 107 NQLLKLIVSSGLFRVAHDVIVALIRECSRCE-KEMLKLISCFDELREVSGFRLNYPCYSS 165

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L + L ++     A+  +  M+ +G       YRT ++ LCKNGY  EA E+F   +ILK
Sbjct: 166 LLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGY-TEAAEMFMC-KILK 223

Query: 340 CEF--DIRAYNSLIDGLCKSGRLEIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMD 396
             F  D     SL+ G C+   L  AL++F  +   G   PN V+YSI+I GLC  G+++
Sbjct: 224 VGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLE 283

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A  L   M E    P+  T+ +LI+         K   L  +M      P+    ++++
Sbjct: 284 EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLI 343

Query: 457 DLLAKN 462
           D L ++
Sbjct: 344 DGLCRD 349


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/455 (32%), Positives = 233/455 (51%), Gaps = 17/455 (3%)

Query: 6   HGFVVLGRI--LKSCFT--------PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           H F  LG+   +K  F         P   T+  +I  +C E  I  A+ LF +++  G  
Sbjct: 106 HKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLI 165

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PD  TY ++++G  +       +  FEEM +      + CEP+ +TY T+I+  CK G +
Sbjct: 166 PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS------MSCEPDVITYNTLINCFCKFGKL 219

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            K  E   +MK   +KPNVV+Y++++  FC      +A + +++M   G+ PN  T+  +
Sbjct: 220 PKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSL 279

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D  CK G + +A RL D M Q GV  +  TY  L+DG C   R+  A+ELF  M + G 
Sbjct: 280 VDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGV 339

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + SY+ LI+G+ K K ++ AL L  EM  +GIKPD++++ T    L  + ++E A  
Sbjct: 340 IPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKV 399

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + +EMQ  G+ A+T+ Y T +D   K+    E + L   +  L  E     +  LIDGLC
Sbjct: 400 VMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLC 459

Query: 356 KSGRLEIALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           K+  +  A++ F  +     L  N   Y+ MI GLC + Q++ A  LF  M +  +VP+ 
Sbjct: 460 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDR 519

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
             +  LI G ++     + + L  KM EI V   A
Sbjct: 520 TAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGA 554



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 195/370 (52%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           VC P    +  +   L +E   ++A +   +MK   + P   +   ++  F      +  
Sbjct: 58  VCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGM 117

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           KR F +M+  G +P V T+N+++D +CK G ++ AS L + M   G+ PD  TYN+++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +   GR++     F  M+SM C+  V +Y+ LIN +CK  ++   L  + EM   G+KP+
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV ++TL     +   +++A K + +M+R G+  +  TY + +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +  +  E+++  Y +LIDGLC   R++ A ELF  +    ++PN+ +Y+ +I G     
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            MD+A +L  +M+   + P+++ +   I     + +      ++++M+E  +  +  I +
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT 417

Query: 454 IVVDLLAKNE 463
            ++D   K+E
Sbjct: 418 TLMDAYFKSE 427



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 176/331 (53%), Gaps = 7/331 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++  G      + +S   P+ V++++L+   C E  + +A   +  +R  G  P+  TY
Sbjct: 217 GKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTY 276

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+LV+  C+  +   A  L +EM+       V  E N VTYT +IDGLC    + +A+EL
Sbjct: 277 TSLVDAYCKIGNLSDAFRLADEMSQ------VGVEWNVVTYTALIDGLCDVERIKEAEEL 330

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    + PN+ +YT++I GF  AK+ + A  L  EM  +G++P+++ +   +  LC 
Sbjct: 331 FGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCG 390

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K++ A  +++ M + G++ + F Y TL+D +  +   +    L   M  +  + T  +
Sbjct: 391 LEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVT 450

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +LI+G CKNK +  A+  +  + +  G++ +  I+  +  GL +  QVE A  LF++M
Sbjct: 451 FCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQM 510

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
            + G+  D   Y + IDG  K G +V+A+ L
Sbjct: 511 AQKGLVPDRTAYTSLIDGKLKQGNVVQALAL 541



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 211/486 (43%), Gaps = 43/486 (8%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F VL      C  P    F +L   L  E    EA   F+K++     P   +   L++ 
Sbjct: 49  FDVLWSTRNVC-VPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHK 107

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
             R   T      F++M       G   +P   TY  +ID +CKEG ++ A  L  +MK 
Sbjct: 108 FARLGKTDGMKRFFKDM------IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKF 161

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + + P+ VTY S+I G+      ++    F EM     +P+V+T+N +++  CK GK+ +
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPK 221

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
                  M Q G++P+  +Y+TL+D FC    +  A + +V M  +G      +Y+ L++
Sbjct: 222 GLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVD 281

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
            YCK   +  A  L  EM   G++ +VV +  L  GL ++ +++ A +LF +M   GV  
Sbjct: 282 AYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIP 341

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  +Y   I G  K   +  A+EL   ++    + D+  Y + I  LC   ++E A  + 
Sbjct: 342 NLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVM 401

Query: 368 RSLPCGVLVPN-----------------------------------VVTYSIMIGGLCND 392
             +    +  N                                    VT+ ++I GLC +
Sbjct: 402 NEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKN 461

Query: 393 GQMDKARDLFLDMEEN-AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
             + KA D F  +  +  +  N   +  +I G  + ++      L  +M +  ++PD + 
Sbjct: 462 KLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTA 521

Query: 452 VSIVVD 457
            + ++D
Sbjct: 522 YTSLID 527



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 18/258 (6%)

Query: 230 MESMGCKHTVFSYSILIN-GYCKNKEIEGALSLYSEMLSKG-----------------IK 271
           M   G KHT+ SY I+ +  +C     +    L   +LSK                    
Sbjct: 1   MNRNGFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCV 60

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P   + + LF  L E    E A + F +M+R  V   T +    +    + G        
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +     +  +  YN +ID +CK G +E A  LF  +    L+P+ VTY+ MI G   
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G++D     F +M+  +  P+VIT++ LI  F +  +  K +E   +MK+  + P+   
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 452 VSIVVDLLAKNEISLNSL 469
            S +VD   K ++   +L
Sbjct: 241 YSTLVDAFCKEDMMQQAL 258



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 57/232 (24%)

Query: 12  GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL------- 64
           GR +K    PD + + + I  LC   +I  A  +  +++  G + + F YTTL       
Sbjct: 371 GRGIK----PDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKS 426

Query: 65  ----------------------------VNGLCRTSHTIVALNLFEEMANGNGEFGVVCE 96
                                       ++GLC+      A++ F  ++N   +FG+  +
Sbjct: 427 ENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISN---DFGL--Q 481

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
            N   YT +IDGLCKE  V+ A  L  QM  K + P+   YTS+I G     +  +A  L
Sbjct: 482 ANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALAL 541

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
             +M + GV+           +LC+N         + L ++ G R     YN
Sbjct: 542 RDKMAEIGVESGAR-----FGDLCQN--------TIKLSLRMGARVGVQHYN 580


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  237 bits (605), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 240/452 (53%), Gaps = 14/452 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     V  R+LK   +P+ VT++ LI GLC   R++EA  +F ++   G EP V T
Sbjct: 358 VGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLT 417

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE----PNTVTYTTIIDGLCKEGFVD 116
           Y++L++G C++          E + +G G +G++      P+ V  + +I+GL ++G +D
Sbjct: 418 YSSLIDGFCKS----------ENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMD 467

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A     Q   + +  N   + ++I G    K   +  +++I M    V P+VVT+ V++
Sbjct: 468 EALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLV 527

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L + G++DEA  L   +++ G  PD   Y TL+DGFC         ++F  M+S G  
Sbjct: 528 KGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF 587

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             +  Y++LIN + +   +E  L L  E++  G++PD+V +NT+  G   +    +A KL
Sbjct: 588 PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKL 647

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F+ ++      +  T+   ID  CK+G + +A+ +F ++     E +I  Y+ LIDG  K
Sbjct: 648 FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFK 707

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +   E A EL+  +    + PN+V+YSI+I GLC  G M++A   F       ++P+VI 
Sbjct: 708 TENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIA 767

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           + +LIRG+ ++   ++ + L   M    +MPD
Sbjct: 768 YGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 239/477 (50%), Gaps = 29/477 (6%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++S  +P+ VTF++LI   C E R+ EA +L+  +   G  PD+  Y+ L+NGL R   
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325

Query: 74  TIVALNLFE-EMANGN-----------------GEFGVVCE-----------PNTVTYTT 104
                +LF   +A G                  G+ G   E           PN VTY+ 
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           +I+GLC+ G V +A  +  Q+  + ++P+V+TY+S+I GFC +++  +   L+  M+ +G
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
             P+VV  +++++ L + G MDEA R     ++ G+  + + +N L+DG     R     
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           ++++ M        V +Y++L+ G  +   ++ AL+L+ ++L KG  PD +I+ TL  G 
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +        ++F  MQ NG+  D   Y   I+   + G +   +EL   +     E DI
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN++I G C       A++LF  L CG   PN +T++I+I   C DG+MD A  +F  
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           M E    PN++T+  LI G+ +        EL  KM    V P+    SI++D L K
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCK 742



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 233/461 (50%), Gaps = 6/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G      +++    P  V    ++KGLC  ++I  A+  F  +   G  P++ T+
Sbjct: 219 GEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTF 278

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+N  C+      A +L+  M     E G+V  P+ V Y+ +I+GL + G +++   L
Sbjct: 279 STLINVYCKELRLDEAFSLYNLMI----EKGIV--PDLVIYSILINGLFRAGKLEEGNSL 332

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
                 + +K +VV ++S++  +    D  +A  ++  M+ +G+ PNVVT++++++ LC+
Sbjct: 333 FSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCR 392

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++ EA  +   +++ G+ P   TY++L+DGFC +  +     L+  M   G    V  
Sbjct: 393 NGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVV 452

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            S+LING  +   ++ AL  + + + +G+  +  + N L  G F + +     K++  M 
Sbjct: 453 CSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMG 512

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              V  D  TY   + GL + G + EA+ LF  L       D   Y +LIDG CK     
Sbjct: 513 MYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPA 572

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             L++F+ +    + P++  Y+++I     +G ++   +L  ++ +  + P+++T++ +I
Sbjct: 573 TGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            G+  +   SK I+L   +K     P+A   +I++D   K+
Sbjct: 633 CGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKD 673



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 220/463 (47%), Gaps = 24/463 (5%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           +  ++ L+   C    +  A   F  +   G     +  + +++ L  +    V L  +E
Sbjct: 140 STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYE 199

Query: 83  EMANGNGEFGVVCE------------------------PNTVTYTTIIDGLCKEGFVDKA 118
           EM  G G +  V                          P  V    I+ GLC    +  A
Sbjct: 200 EMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVA 259

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            +    M      PN+VT++++I  +C     +EA  L+  M+++G+ P++V ++++++ 
Sbjct: 260 SDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILING 319

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L + GK++E + L  + +  GV+ D   +++++D +   G +  A E++  M   G    
Sbjct: 320 LFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPN 379

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +YSILING C+N  +  A  ++ ++L +G++P V+ +++L  G  +   +   F L+ 
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M R G   D       I+GL + G + EA+  F          +   +N+LIDG  +  
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R    L+++  +    ++P+VVTY++++ GL   G++D+A  LF  + +    P+ I + 
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            LI GF +  +P+  +++   M+   + PD  I ++++++  +
Sbjct: 560 TLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 204/464 (43%), Gaps = 49/464 (10%)

Query: 47  TKLRVFGCEPDVFTYTTLVNGLCRTSHTIV-------ALNLFEEMANGNGEFGVVCE--- 96
           + LR F    +       V   C  +H ++       A  +F+ M    G   V+ E   
Sbjct: 71  SALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHG 130

Query: 97  --------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK----------------- 131
                   P+TV Y+ ++   C+ G VD+A +    M    +                  
Sbjct: 131 SFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSD 189

Query: 132 -------------PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
                          +  Y  V   F    +  +       ++++G+ P +V  N I+  
Sbjct: 190 RIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LC   ++  AS   D+M++ G  P+  T++TL++ +C   R++ A  L+  M   G    
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           +  YSILING  +  ++E   SL+S  L++G+K DVVI +++      +  + +A +++ 
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYT 369

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M + G++ +  TY   I+GLC+NG ++EA  +F  +     E  +  Y+SLIDG CKS 
Sbjct: 370 RMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            L     L+  +     VP+VV  S++I GL   G MD+A   F    +  +  N   F+
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFN 489

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            LI G  R+      +++   M    V+PD    +++V  LA+ 
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQ 533



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 148/297 (49%), Gaps = 45/297 (15%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+T L+KGL  + R+ EA ALF +L   G  PD   Y TL++G C+       L +
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+ M + NG F     P+   Y  +I+   +EG V+   ELL ++    ++P++VTY ++
Sbjct: 578 FKLMQS-NGIF-----PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTM 631

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C  K +++A +LF  +     QPN +TF +++D  CK+G+MD+A  +   M++ G 
Sbjct: 632 ICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGP 691

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-----------------CKH------ 237
            P+  TY+ L+DG+  T     A EL+  M  +G                 CK       
Sbjct: 692 EPNILTYSCLIDGYFKTENTESAFELYEKM--LGDRVSPNIVSYSILIDGLCKKGLMEEA 749

Query: 238 --------------TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
                          V +Y ILI GYCK   +  A+ LY  ML  GI PD ++   L
Sbjct: 750 SLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 222/443 (50%), Gaps = 9/443 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L R+ K    P   T+ +L+        I +A  +   +  FG EPD++TY
Sbjct: 259 GMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTY 318

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L  GLC+      A  L +EM     E   +  P+ VTY T++D   K      A  L
Sbjct: 319 NVLAAGLCQAGKVDEAFKLKDEM-----EHLSIVSPDVVTYNTLVDACFKYQRSSDALNL 373

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+DK +K ++VT+  V++G C      EA      M ++G+ P+V+T+N ++D  CK
Sbjct: 374 LEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCK 433

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + +A  L+D M++ G++ D FT NTLL   C   R   A+EL  S    G      S
Sbjct: 434 ARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVS 493

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  ++  Y K  + E AL L+ EM  + + P +  +NTL  GL  I ++  A    +E+ 
Sbjct: 494 YGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELM 553

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGR 359
           + G+  D  TY   I   CK G + +A + FH  ++L+  F  D+   N+L++GLC  G+
Sbjct: 554 KKGLVPDDTTYNIIIHAYCKEGDLEKAFQ-FHN-KMLENYFKPDVVTCNTLMNGLCLHGK 611

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LE A++LF S        +V+TY+ +I  LC DG +D A   F DME   + P+  T+++
Sbjct: 612 LEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNV 671

Query: 420 LIRGFIRINEPSKVIELLHKMKE 442
           ++          +   +LHK+ E
Sbjct: 672 VLSALSEAGRSEEAQNMLHKLDE 694



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 231/462 (50%), Gaps = 9/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++     L  +     +PD VT+ +L+K  C +  + EA  L  +++  G  P   TY
Sbjct: 224 GTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATY 283

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLV+   R      A N+ E M      FG   EP+  TY  +  GLC+ G VD+A +L
Sbjct: 284 NTLVSAYARLGWIKQATNVVEAMT----AFGF--EPDLWTYNVLAAGLCQAGKVDEAFKL 337

Query: 122 LLQMKDKNI-KPNVVTYTSVIRG-FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
             +M+  +I  P+VVTY +++   F Y +  ++A  L  EM D+GV+ ++VT N+++  L
Sbjct: 338 KDEMEHLSIVSPDVVTYNTLVDACFKYQRS-SDALNLLEEMRDKGVKSSLVTHNIVVKGL 396

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+ G+++EA   L +M + G+ PD  TYNTL+D +C    V  A  L   M   G K   
Sbjct: 397 CREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDT 456

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           F+ + L+   CK K  E A  L      +G  PD V + T+    F+ ++ E A  L+DE
Sbjct: 457 FTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDE 516

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M +  +    +TY T I GLC  G + EA++  + L       D   YN +I   CK G 
Sbjct: 517 MSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGD 576

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LE A +    +      P+VVT + ++ GLC  G+++KA  LF    E     +VIT++ 
Sbjct: 577 LEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNT 636

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           LI+   +  +    +     M+   + PDA   ++V+  L++
Sbjct: 637 LIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 678



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 182/396 (45%), Gaps = 42/396 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++      L  + +    PD +T+ +LI   C    + +A  L  ++   G + D FT 
Sbjct: 400 GQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTL 459

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  LC+      A    EE+     + G V  P+ V+Y T++    KE   + A  L
Sbjct: 460 NTLLYNLCKEKRYEEA----EELLRSPPQRGFV--PDEVSYGTVMAAYFKENKPEPALYL 513

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + + P++ TY ++I+G C      EA     E+M +G+ P+  T+N+I+   CK
Sbjct: 514 WDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCK 573

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +++A +  + M+++  +PD  T NTL++G CL G++  A +LF S    G K  V +
Sbjct: 574 EGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVIT 633

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE----------IHQVE 291
           Y+ LI   CK+ +++ AL  +++M ++G++PD   +N +   L E          +H+++
Sbjct: 634 YNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLD 693

Query: 292 RAFKLFD--------------------------EMQRNGVAADTWTYRTFIDGLCKNGYI 325
            + KL +                          E   N    D  +Y   +  LC  G +
Sbjct: 694 ESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQL 753

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            EA  +   +       D   Y +L++GL K  + +
Sbjct: 754 KEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQKRQ 789



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 169/363 (46%), Gaps = 36/363 (9%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + PN  T+  ++   C      +A      M   G+ P+VVT+N ++   C+ G + EA 
Sbjct: 206 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEAR 265

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M + G+ P   TYNTL+  +   G +  A  +  +M + G +  +++Y++L  G 
Sbjct: 266 TLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGL 325

Query: 250 CKNKEIEGALSLYSEMLSKGI-KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           C+  +++ A  L  EM    I  PDVV +NTL    F+  +   A  L +EM+  GV + 
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG--------------- 353
             T+   + GLC+ G + EA+     +       D+  YN+LID                
Sbjct: 386 LVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMD 445

Query: 354 --------------------LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
                               LCK  R E A EL RS P    VP+ V+Y  ++     + 
Sbjct: 446 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKEN 505

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           + + A  L+ +M +  + P++ T++ LI+G   I + ++ I+ L+++ +  ++PD +  +
Sbjct: 506 KPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYN 565

Query: 454 IVV 456
           I++
Sbjct: 566 III 568



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 161/335 (48%), Gaps = 4/335 (1%)

Query: 118 AKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRL--FIEMMDQGVQPNVVTFNV 174
           A +LL   + + +++P++    +V+     +   +    L  F  ++   + PN  TFN+
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++   C  G + +A   L  M   G+ PD  TYNTLL   C  G +  A+ L   M+  G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
              T  +Y+ L++ Y +   I+ A ++   M + G +PD+  +N L  GL +  +V+ AF
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 335

Query: 295 KLFDEMQR-NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
           KL DEM+  + V+ D  TY T +D   K     +A+ L   +R    +  +  +N ++ G
Sbjct: 336 KLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKG 395

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LC+ G+LE AL   + +    L P+V+TY+ +I   C    + KA  L  +M  + +  +
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             T + L+    +     +  ELL    +   +PD
Sbjct: 456 TFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPD 490



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 4/278 (1%)

Query: 188 ASRLLDLMIQHG-VRPDAFTYNTLLDGFCLTGRVNHAKEL--FVSMESMGCKHTVFSYSI 244
           A++LL    + G VRP     N +L     +   +    L  F S+ ++      +++++
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L++ +C    +  ALS  S M   G+ PDVV +NTL         +  A  L   M++ G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +A    TY T +    + G+I +A  +   +     E D+  YN L  GLC++G+++ A 
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 335

Query: 365 ELFRSLP-CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           +L   +    ++ P+VVTY+ ++       +   A +L  +M +  V  +++T +++++G
Sbjct: 336 KLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKG 395

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             R  +  + +  L  M E  + PD    + ++D   K
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCK 433



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 42/250 (16%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++     L  ++K    PD  T+  +I   C E  + +A     K+     +PDV T
Sbjct: 539 IGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVT 598

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             TL+NGLC       A+ LFE  A    +  V      +TY T+I  LCK+G VD A  
Sbjct: 599 CNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDV------ITYNTLIQALCKDGDVDTALH 652

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF---------------------IE 159
               M+ + ++P+  TY  V+     A    EA+ +                       E
Sbjct: 653 FFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAE 712

Query: 160 MMDQGVQPNVV---------------TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
            +  G  P V                ++N  + ELC  G++ EA  +LD M+Q G+  D+
Sbjct: 713 EVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDS 772

Query: 205 FTYNTLLDGF 214
            TY TL++G 
Sbjct: 773 STYITLMEGL 782


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 232/472 (49%), Gaps = 46/472 (9%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L    +P   TF  ++K LC  + +  A +L   +   GC P+   Y TL++ L + + 
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL L EEM      F + C P+  T+  +I GLCK   +  A +L+ +M  +   P+
Sbjct: 269 VSEALKLLEEM------FVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPD 322

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL- 192
            +TY  ++ G C     NEA+++ I++      PN    N +++    +G++ EA   L 
Sbjct: 323 NMTYGFLLHGLCRIGKLNEARKILIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLN 378

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK- 251
           + MI  G +PD FTYN L+ G C  G ++ A++L   M   GC+  V +Y+IL+NG CK 
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKA 438

Query: 252 ----------------------------------NKEIEGALSLYSEMLSKGIKPDVVIH 277
                                              +++  AL+L SEM +KG KPD+  +
Sbjct: 439 GLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTY 498

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N+L  GL ++ +++ AF+LF  M  +G  A+  TY T I  L + G   +A+ L + +  
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
             C  D   YN LI   CK G +E  LEL+  +    L  + ++ +IMI GLC  G++D 
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDN 618

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           A +   D      VP+++T++ ++ G  ++    + + L  +++   V PDA
Sbjct: 619 AFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDA 670



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 222/452 (49%), Gaps = 30/452 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +VS    +L  +      PD  TF  +I GLC  ++I +A  L  ++ + G  PD  TY 
Sbjct: 268 QVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYG 327

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNG----------------------------EFGVV 94
            L++GLCR      A  +  ++   N                              FG  
Sbjct: 328 FLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGF- 386

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
            +P+  TY  ++ GLCKEG +  A++L+ +M  +  +PNV+TY  ++ G C A    EA 
Sbjct: 387 -QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAG 445

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            +  EM  +G+  N V +N ++  LC+  K+  A  LL  M   G +PD FTYN+L+ G 
Sbjct: 446 LVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGL 505

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   R++ A  LF +M   G      +Y+ LI+   +    + AL+L ++ML +G   D 
Sbjct: 506 CKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDK 565

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +N L     ++  +E+  +L+++M  +G+ ADT +    I+GLCK G +  A E    
Sbjct: 566 ITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRD 625

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                   DI  YNS+++GLCK GR++ AL LF  L    + P+  TY+  I   C +G 
Sbjct: 626 AINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGM 685

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           ++ A   F    EN  VP+ +T+++L+   ++
Sbjct: 686 VNDACSFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 196/393 (49%), Gaps = 15/393 (3%)

Query: 2   GRVSHGFVVLGR------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGC 54
           G + HG   +G+      IL     P+     +LI G     ++ EA +   +  + FG 
Sbjct: 327 GFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGF 386

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           +PD+FTY  L++GLC+      A +L  EM+         CEPN +TY  +++GLCK G 
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG------CEPNVITYAILVNGLCKAGL 440

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +++A  +L +M  + +  N V Y  +I   C  +  + A  L  EM  +G +P++ T+N 
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  LCK  ++DEA RL   M+  G   +  TYNTL+      G    A  L   M   G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C     +Y+ LI  +CK   IE  L LY +M+  G+  D +  N +  GL ++ +V+ AF
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +   +    G   D  TY + ++GLCK G I EA+ LF  L++     D   YN+ I   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 355 CKSGRLEIALELF-RSLPCGVLVPNVVTYSIMI 386
           CK G +  A   F R +  G  VP+ +T+++++
Sbjct: 681 CKEGMVNDACSFFYRGIENG-FVPSNLTWNVLV 712



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 211/454 (46%), Gaps = 39/454 (8%)

Query: 41  EAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNT 99
           +A  L   +R V+ CEP   +Y  ++  L   +   VA N+F +M +     GV   P  
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSK----GV--SPTV 218

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
            T+  ++  LC    VD A  LL  M      PN + Y ++I         +EA +L  E
Sbjct: 219 FTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEE 278

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M   G  P+V TFN ++  LCK  K+ +A++L+D M+  G  PD  TY  LL G C  G+
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK 338

Query: 220 VNHAKELFV--------------------------------SMESMGCKHTVFSYSILIN 247
           +N A+++ +                                +M + G +  +F+Y+IL++
Sbjct: 339 LNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMH 398

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G CK   +  A  L +EM  +G +P+V+ +  L  GL +   +E A  +  EM   G+  
Sbjct: 399 GLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI 458

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           ++  Y   I  LC+   +  A+ L   +    C+ D+  YNSLI GLCK  R++ A  LF
Sbjct: 459 NSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLF 518

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            ++     V N VTY+ +I  L   G   KA  L  DM       + IT++ LI+ F ++
Sbjct: 519 HNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKV 578

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               K +EL  +M    +  D    +I+++ L K
Sbjct: 579 GNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 6/299 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    +VL  +     T ++V +  LI  LC + ++  A  L +++   GC+PD+FTY
Sbjct: 439 GLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTY 498

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ GLC+      A  LF  M       G V   N VTY T+I  L + G   KA  L
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLD----GAV--ANNVTYNTLIHALLRRGAFQKALTL 552

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M  +    + +TY  +I+ FC   +  +   L+ +M+  G+  + ++ N++++ LCK
Sbjct: 553 VNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+D A   L   I  G  PD  TYN++L+G C  GR+  A  LF  ++  G +   F+
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT 672

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           Y+  I+  CK   +  A S +   +  G  P  +  N L   L +    E  F + DE+
Sbjct: 673 YNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 185/399 (46%), Gaps = 18/399 (4%)

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTI--IDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           L +FE +    G     C    V Y  I  +  + K   +DK   LL+QMK++ I     
Sbjct: 96  LEIFERVGGQKG----YCHTFDVYYVFINKLGAIGKFKLIDK---LLMQMKEEGIVFRES 148

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDL 194
            +  +++ +  A    +A RL ++M    + +P   +++++++ L        A+ +   
Sbjct: 149 IFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYD 208

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+  GV P  FT+  ++   C+   V+ A  L   M   GC      Y  LI+   +  +
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  AL L  EM   G  PDV   N +  GL +++++  A KL D M   G   D  TY  
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            + GLC+ G + EA ++   L  + C  +    N+LI+G   SG+L+ A           
Sbjct: 329 LLHGLCRIGKLNEARKI---LIKIPCPNN-AILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 375 -LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P++ TY+I++ GLC +G +  ARDL  +M      PNVIT+ +L+ G  +     + 
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNE---ISLNSL 469
             +LH+M    +  ++ I + ++  L + E   ++LN L
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V + F  L   +   F PD VT+ S++ GLC   RI EA  LF +L+V G  PD FT
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT 672

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           Y T ++  C+      A + F        E G V  P+ +T+  ++  L K+
Sbjct: 673 YNTFISWQCKEGMVNDACSFFYRGI----ENGFV--PSNLTWNVLVYTLLKQ 718


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 234/418 (55%), Gaps = 8/418 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF-GVVCEPNTVTYTTIIDGLCKEGF 114
           P +  ++ L + + R  H    + L +E+     EF G+  E +  + + +I+  C    
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEI-----EFLGI--EQDIHSLSILINCFCHLHR 112

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           VD    +L ++    ++P++VT+T+++ G C     ++   L+ +M+ +G+QPNV T+NV
Sbjct: 113 VDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNV 172

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           I++ L K+GK +EA   L  M + G  P+   Y+TL+DG+CL G+++ A+ +F  M S G
Sbjct: 173 IINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG 232

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C   V++Y+ L+NGYCK + IE A+ L  E L KG+ PD+V   T+  GL    +   A 
Sbjct: 233 CTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQ 292

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +LF  +  +G   +  TY   +DGLCK+G + EA  LF  ++    + ++  Y  LID L
Sbjct: 293 QLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSL 352

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK G+++   ELF  L    L PNV TY+ ++G LC +G + +A  LF  MEE+   P+ 
Sbjct: 353 CKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDK 412

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
             ++++I+GF++  +PS   +L+ +M       DA+  +++ D    +  +L +L  F
Sbjct: 413 CAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLNDFPTNDIPALKTLIGF 470



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/322 (34%), Positives = 172/322 (53%), Gaps = 6/322 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV  G  VL +ILK    P  VTFT+L+ GLC E ++ +   L+  + V G +P+V+T
Sbjct: 110 LHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYT 169

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  ++N L ++     AL   ++M        V C PN V Y+T+IDG C  G +D+A+ 
Sbjct: 170 YNVIINSLSKSGKANEALGFLKQMEK------VGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M  K   PNV TYTS++ G+C  +   EA +L  E + +G+ P++VTF  I+  LC
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+   A +L   +  HG  P+  TY  LLDG C  G +  A  LF  M+    K  + 
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ILI+  CK  +I+    L+S ++ +G+KP+V  +  L   L +   +  A KLF +M
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 301 QRNGVAADTWTYRTFIDGLCKN 322
           + +G   D   Y   I G  ++
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQH 425



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 185/349 (53%), Gaps = 6/349 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  + + LI   C   R+    ++ +K+   G EP + T+TTL+NGLC        + L+
Sbjct: 96  DIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLY 155

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           ++M           +PN  TY  II+ L K G  ++A   L QM+     PNVV Y+++I
Sbjct: 156 DDMLVRG------LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLI 209

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C     +EA+ +F  M+ +G  PNV T+  +M+  CK  +++EA +LLD  ++ G+ 
Sbjct: 210 DGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLV 269

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  T+ T++ G C  GR   A++LF  + + G    + +Y +L++G CK+  +E A +L
Sbjct: 270 PDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFAL 329

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EM    +KP++VI+  L   L +  +++   +LF  +   G+  + +TY   +  LCK
Sbjct: 330 FQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCK 389

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            G I+EA +LF  +    C  D  AYN +I G  +     +A +L   +
Sbjct: 390 EGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEM 438



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 149/279 (53%), Gaps = 6/279 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +     L ++ K    P+ V +++LI G C   ++ EA ++F  +   GC P+V+TY
Sbjct: 181 GKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTY 240

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L+NG C+      A+ L +E        G+V  P+ VT+TTII GLC+ G    A++L
Sbjct: 241 TSLMNGYCKIERIEEAVQLLDETLRK----GLV--PDIVTFTTIISGLCRAGRPLAAQQL 294

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +      PN++TY  ++ G C   +  EA  LF EM    V+PN+V + +++D LCK
Sbjct: 295 FRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCK 354

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ +   L   +I  G++P+ +TY  L+   C  G +  A +LF  ME  GC     +
Sbjct: 355 CGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCA 414

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           Y+++I G+ ++K+   A  L  EM+++G   D      L
Sbjct: 415 YNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 177/347 (51%), Gaps = 2/347 (0%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P +V ++ +         +     L  E+   G++ ++ + +++++  C   ++D    +
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  +++ G+ P   T+ TLL+G C+ G+++    L+  M   G +  V++Y+++IN   K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           + +   AL    +M   G  P+VV ++TL  G     Q++ A  +FD M   G   + +T
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 312 YRTFIDGLCKNGYIVEAVELF-HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           Y + ++G CK   I EAV+L   TLR      DI  + ++I GLC++GR   A +LFR +
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVP-DIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                 PN++TY +++ GLC  G +++A  LF +M+ + V PN++ + +LI    +  + 
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
               EL  ++ +  + P+    + +V  L K  + + +   F   E+
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEE 405



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 132/277 (47%)

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           D+A     LM+     P    ++ L       G       L   +E +G +  + S SIL
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           IN +C    ++  LS+ S++L  G++P +V   TL  GL    ++++   L+D+M   G+
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             + +TY   I+ L K+G   EA+     +  + C  ++  Y++LIDG C  G+++ A  
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           +F  +      PNV TY+ ++ G C   ++++A  L  +     +VP+++TF  +I G  
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           R   P    +L   +      P+     +++D L K+
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKH 320



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 3/188 (1%)

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           K+ + AL+ +  ML +   P +V  + LF  +  +   E    L  E++  G+  D  + 
Sbjct: 41  KDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSL 100

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+  C    +   + +   +  L  E  I  + +L++GLC  G+++  + L+  +  
Sbjct: 101 SILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINE 429
             L PNV TY+++I  L   G+ ++A      ME+   VPNV+ +  LI G+    +++E
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE 220

Query: 430 PSKVIELL 437
              V +L+
Sbjct: 221 ARSVFDLM 228


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 232/472 (49%), Gaps = 46/472 (9%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L    +P   TF  ++K LC  + +  A +L   +   GC P+   Y TL++ L + + 
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL L EEM      F + C P+  T+  +I GLCK   +  A +L+ +M  +   P+
Sbjct: 269 VSEALKLLEEM------FVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPD 322

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL- 192
            +TY  ++ G C     NEA+++ I++      PN    N +++    +G++ EA   L 
Sbjct: 323 NMTYGFLLHGLCRIGKLNEARKILIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLN 378

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK- 251
           + MI  G +PD FTYN L+ G C  G ++ A++L   M   GC+  V +Y+IL+NG CK 
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKA 438

Query: 252 ----------------------------------NKEIEGALSLYSEMLSKGIKPDVVIH 277
                                              +++  AL+L SEM +KG KPD+  +
Sbjct: 439 GLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTY 498

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N+L  GL ++ +++ AF+LF  M  +G  A+  TY T I  L + G   +A+ L + +  
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
             C  D   YN LI   CK G +E  LEL+  +    L  + ++ +IMI GLC  G++D 
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDN 618

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           A +   D      VP+++T++ ++ G  ++    + + L  +++   V PDA
Sbjct: 619 AFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDA 670



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 222/452 (49%), Gaps = 30/452 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +VS    +L  +      PD  TF  +I GLC  ++I +A  L  ++ + G  PD  TY 
Sbjct: 268 QVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYG 327

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNG----------------------------EFGVV 94
            L++GLCR      A  +  ++   N                              FG  
Sbjct: 328 FLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGF- 386

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
            +P+  TY  ++ GLCKEG +  A++L+ +M  +  +PNV+TY  ++ G C A    EA 
Sbjct: 387 -QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAG 445

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            +  EM  +G+  N V +N ++  LC+  K+  A  LL  M   G +PD FTYN+L+ G 
Sbjct: 446 LVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGL 505

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   R++ A  LF +M   G      +Y+ LI+   +    + AL+L ++ML +G   D 
Sbjct: 506 CKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDK 565

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +N L     ++  +E+  +L+++M  +G+ ADT +    I+GLCK G +  A E    
Sbjct: 566 ITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRD 625

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                   DI  YNS+++GLCK GR++ AL LF  L    + P+  TY+  I   C +G 
Sbjct: 626 AINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGM 685

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           ++ A   F    EN  VP+ +T+++L+   ++
Sbjct: 686 VNDACLFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 197/393 (50%), Gaps = 15/393 (3%)

Query: 2   GRVSHGFVVLGR------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGC 54
           G + HG   +G+      IL     P+     +LI G     ++ EA +   +  + FG 
Sbjct: 327 GFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGF 386

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           +PD+FTY  L++GLC+      A +L  EM+         CEPN +TY  +++GLCK G 
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG------CEPNVITYAILVNGLCKAGL 440

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +++A  +L +M  + +  N V Y  +I   C  +  + A  L  EM  +G +P++ T+N 
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  LCK  ++DEA RL   M+  G   +  TYNTL+      G    A  L   M   G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C     +Y+ LI  +CK   IE  L LY +M+  G+  D +  N +  GL ++ +V+ AF
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +   +    G   D  TY + ++GLCK G I EA+ LF  L++     D   YN+ I   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 355 CKSGRLEIA-LELFRSLPCGVLVPNVVTYSIMI 386
           CK G +  A L  +R +  G  VP+ +T+++++
Sbjct: 681 CKEGMVNDACLFFYRGIENG-FVPSNLTWNVLV 712



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 211/454 (46%), Gaps = 39/454 (8%)

Query: 41  EAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNT 99
           +A  L   +R V+ CEP   +Y  ++  L   +   VA N+F +M +     GV   P  
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSK----GV--SPTV 218

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
            T+  ++  LC    VD A  LL  M      PN + Y ++I         +EA +L  E
Sbjct: 219 FTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEE 278

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M   G  P+V TFN ++  LCK  K+ +A++L+D M+  G  PD  TY  LL G C  G+
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK 338

Query: 220 VNHAKELFV--------------------------------SMESMGCKHTVFSYSILIN 247
           +N A+++ +                                +M + G +  +F+Y+IL++
Sbjct: 339 LNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMH 398

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G CK   +  A  L +EM  +G +P+V+ +  L  GL +   +E A  +  EM   G+  
Sbjct: 399 GLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI 458

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           ++  Y   I  LC+   +  A+ L   +    C+ D+  YNSLI GLCK  R++ A  LF
Sbjct: 459 NSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLF 518

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            ++     V N VTY+ +I  L   G   KA  L  DM       + IT++ LI+ F ++
Sbjct: 519 HNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKV 578

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               K +EL  +M    +  D    +I+++ L K
Sbjct: 579 GNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 144/299 (48%), Gaps = 6/299 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    +VL  +     T ++V +  LI  LC + ++  A  L +++   GC+PD+FTY
Sbjct: 439 GLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTY 498

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ GLC+      A  LF  M       G V   N VTY T+I  L + G   KA  L
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLD----GAV--ANNVTYNTLIHALLRRGAFQKALTL 552

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M  +    + +TY  +I+ FC   +  +   L+ +M+  G+  + ++ N++++ LCK
Sbjct: 553 VNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+D A   L   I  G  PD  TYN++L+G C  GR+  A  LF  ++  G +   F+
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT 672

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           Y+  I+  CK   +  A   +   +  G  P  +  N L   L +    E  F + DE+
Sbjct: 673 YNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 185/399 (46%), Gaps = 18/399 (4%)

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTI--IDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           L +FE +    G     C    V Y  I  +  + K   +DK   LL+QMK++ I     
Sbjct: 96  LEIFERVGGQKG----YCHTFDVYYVFINKLGAIGKFKLIDK---LLMQMKEEGIVFRES 148

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDL 194
            +  +++ +  A    +A RL ++M    + +P   +++++++ L        A+ +   
Sbjct: 149 IFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYD 208

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+  GV P  FT+  ++   C+   V+ A  L   M   GC      Y  LI+   +  +
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  AL L  EM   G  PDV   N +  GL +++++  A KL D M   G   D  TY  
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            + GLC+ G + EA ++   L  + C  +    N+LI+G   SG+L+ A           
Sbjct: 329 LLHGLCRIGKLNEARKI---LIKIPCPNN-AILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 375 -LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P++ TY+I++ GLC +G +  ARDL  +M      PNVIT+ +L+ G  +     + 
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNE---ISLNSL 469
             +LH+M    +  ++ I + ++  L + E   ++LN L
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 41/70 (58%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V + F  L   +   F PD VT+ S++ GLC   RI EA  LF +L+V G  PD FT
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT 672

Query: 61  YTTLVNGLCR 70
           Y T ++  C+
Sbjct: 673 YNTFISWQCK 682


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 240/452 (53%), Gaps = 14/452 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     V  R+LK   +P+ VT++ LI GLC   R++EA  +F ++   G EP V T
Sbjct: 358 VGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLT 417

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE----PNTVTYTTIIDGLCKEGFVD 116
           Y++L++G C++          E + +G G +G++      P+ V  + +I+GL ++G +D
Sbjct: 418 YSSLIDGFCKS----------ENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMD 467

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A     Q   + +  N   + ++I G    K   +  +++I M    V P+VVT+ V++
Sbjct: 468 EALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLV 527

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L + G++DEA  L   +++ G  PD   Y TL+DGFC         ++F  M+S G  
Sbjct: 528 KGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF 587

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             +  Y++LIN + +   +E  L L  E++  G++PD+V +NT+  G   +    +A KL
Sbjct: 588 PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKL 647

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F+ ++      +  T+   ID  CK+G + +A+ +F ++     E +I  Y+ LIDG  K
Sbjct: 648 FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFK 707

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +   E A EL+  +    + PN+V+YSI+I GLC  G M++A   F       ++P+VI 
Sbjct: 708 TENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIA 767

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           + +LIRG+ ++   ++ + L   M    +MPD
Sbjct: 768 YGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 239/477 (50%), Gaps = 29/477 (6%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++S  +P+ VTF++LI   C E R+ EA +L+  +   G  PD+  Y+ L+NGL R   
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325

Query: 74  TIVALNLFE-EMANGN-----------------GEFGVVCE-----------PNTVTYTT 104
                +LF   +A G                  G+ G   E           PN VTY+ 
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           +I+GLC+ G V +A  +  Q+  + ++P+V+TY+S+I GFC +++  +   L+  M+ +G
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
             P+VV  +++++ L + G MDEA R     ++ G+  + + +N L+DG     R     
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           ++++ M        V +Y++L+ G  +   ++ AL+L+ ++L KG  PD +I+ TL  G 
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +        ++F  MQ NG+  D   Y   I+   + G +   +EL   +     E DI
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN++I G C       A++LF  L CG   PN +T++I+I   C DG+MD A  +F  
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           M E    PN++T+  LI G+ +        EL  KM    V P+    SI++D L K
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCK 742



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 233/461 (50%), Gaps = 6/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G      +++    P  V    ++KGLC  ++I  A+  F  +   G  P++ T+
Sbjct: 219 GEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTF 278

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+N  C+      A +L+  M     E G+V  P+ V Y+ +I+GL + G +++   L
Sbjct: 279 STLINVYCKELRLDEAFSLYNLMI----EKGIV--PDLVIYSILINGLFRAGKLEEGNSL 332

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
                 + +K +VV ++S++  +    D  +A  ++  M+ +G+ PNVVT++++++ LC+
Sbjct: 333 FSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCR 392

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++ EA  +   +++ G+ P   TY++L+DGFC +  +     L+  M   G    V  
Sbjct: 393 NGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVV 452

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            S+LING  +   ++ AL  + + + +G+  +  + N L  G F + +     K++  M 
Sbjct: 453 CSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMG 512

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              V  D  TY   + GL + G + EA+ LF  L       D   Y +LIDG CK     
Sbjct: 513 MYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPA 572

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             L++F+ +    + P++  Y+++I     +G ++   +L  ++ +  + P+++T++ +I
Sbjct: 573 TGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            G+  +   SK I+L   +K     P+A   +I++D   K+
Sbjct: 633 CGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKD 673



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 220/463 (47%), Gaps = 24/463 (5%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           +  ++ L+   C    +  A   F  +   G     +  + +++ L  +    V L  +E
Sbjct: 140 STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYE 199

Query: 83  EMANGNGEFGVVCE------------------------PNTVTYTTIIDGLCKEGFVDKA 118
           EM  G G +  V                          P  V    I+ GLC    +  A
Sbjct: 200 EMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVA 259

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            +    M      PN+VT++++I  +C     +EA  L+  M+++G+ P++V ++++++ 
Sbjct: 260 SDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILING 319

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L + GK++E + L  + +  GV+ D   +++++D +   G +  A E++  M   G    
Sbjct: 320 LFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPN 379

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +YSILING C+N  +  A  ++ ++L +G++P V+ +++L  G  +   +   F L+ 
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M R G   D       I+GL + G + EA+  F          +   +N+LIDG  +  
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R    L+++  +    ++P+VVTY++++ GL   G++D+A  LF  + +    P+ I + 
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            LI GF +  +P+  +++   M+   + PD  I ++++++  +
Sbjct: 560 TLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 204/464 (43%), Gaps = 49/464 (10%)

Query: 47  TKLRVFGCEPDVFTYTTLVNGLCRTSHTIV-------ALNLFEEMANGNGEFGVVCE--- 96
           + LR F    +       V   C  +H ++       A  +F+ M    G   V+ E   
Sbjct: 71  SALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHG 130

Query: 97  --------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK----------------- 131
                   P+TV Y+ ++   C+ G VD+A +    M    +                  
Sbjct: 131 SFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSD 189

Query: 132 -------------PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
                          +  Y  V   F    +  +       ++++G+ P +V  N I+  
Sbjct: 190 RIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LC   ++  AS   D+M++ G  P+  T++TL++ +C   R++ A  L+  M   G    
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           +  YSILING  +  ++E   SL+S  L++G+K DVVI +++      +  + +A +++ 
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYT 369

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M + G++ +  TY   I+GLC+NG ++EA  +F  +     E  +  Y+SLIDG CKS 
Sbjct: 370 RMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            L     L+  +     VP+VV  S++I GL   G MD+A   F    +  +  N   F+
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFN 489

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            LI G  R+      +++   M    V+PD    +++V  LA+ 
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQ 533



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 155/320 (48%), Gaps = 45/320 (14%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+T L+KGL  + R+ EA ALF +L   G  PD   Y TL++G C+       L +
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+ M + NG F     P+   Y  +I+   +EG V+   ELL ++    ++P++VTY ++
Sbjct: 578 FKLMQS-NGIF-----PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTM 631

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C  K +++A +LF  +     QPN +TF +++D  CK+G+MD+A  +   M++ G 
Sbjct: 632 ICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGP 691

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-----------------CKH------ 237
            P+  TY+ L+DG+  T     A EL+  M  +G                 CK       
Sbjct: 692 EPNILTYSCLIDGYFKTENTESAFELYEKM--LGDRVSPNIVSYSILIDGLCKKGLMEEA 749

Query: 238 --------------TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
                          V +Y ILI GYCK   +  A+ LY  ML  GI PD ++   L   
Sbjct: 750 SLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEY 809

Query: 284 LFEIHQVERAFKLFDEMQRN 303
            F+  Q      +F E   N
Sbjct: 810 GFQDSQASIYSTVFPESPLN 829


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 245/512 (47%), Gaps = 76/512 (14%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKG-LC-AESRIMEAAALFTKLRVFGCEPDV 58
           +GR+   F  +GR++ +    +     S  +G LC A  R M    +  ++   GC+PD+
Sbjct: 112 LGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRMPELGCKPDL 171

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           F+YT L+ GLC    +  AL+L   MA+  G     C  + V YTT+I+GL +EG +DKA
Sbjct: 172 FSYTILLKGLCDDKTSQQALDLLHIMADHKGR----CPLDVVAYTTVINGLLREGQLDKA 227

Query: 119 KELLLQMKDKNIKPNVVTYTSVI-----------------------------------RG 143
             L   M D+   P+VVTY+S+I                                    G
Sbjct: 228 YSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHG 287

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           +C +    EA  +F +M   GV+P+VVT+  +MD LCKNGK  EA ++ D +++ G +PD
Sbjct: 288 YCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPD 347

Query: 204 AFTYNTLLDGFCLTG-----------------------------------RVNHAKELFV 228
           + TY TLL G+   G                                   +V+ A  +F 
Sbjct: 348 STTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFS 407

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
           +M   G    + +Y  +++  C    ++ ALS ++ + S+G+ P++V+  TL  GL    
Sbjct: 408 NMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCD 467

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           + ++  +L  EM   G+  DT  +   +  LCK G ++EA  LF  +  +  E +   YN
Sbjct: 468 KWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYN 527

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +LIDG C  G+++ A++L   +    + P+ VTY+ +I G   +G+++    L  +M+  
Sbjct: 528 TLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGK 587

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            V P ++T++ML++G  +        EL  +M
Sbjct: 588 GVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 186/365 (50%), Gaps = 2/365 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK-P-NVVTYTSVIRGFCYAKDWNE 152
           C+P+  +YT ++ GLC +    +A +LL  M D   + P +VV YT+VI G       ++
Sbjct: 167 CKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDK 226

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  LF  M+D+G  P+VVT++ I+  L K   MD+A+++   M+++GV PD   Y +L+ 
Sbjct: 227 AYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVH 286

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C +G+   A  +F  M   G +  V +Y+ L++  CKN +   A  ++  ++ +G KP
Sbjct: 287 GYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 346

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D   + TL  G      +     L D M + G+      +   +    K+  + EA+ +F
Sbjct: 347 DSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVF 406

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +R      DI  Y +++D LC +GR++ AL  F SL    L PN+V ++ +I GLC  
Sbjct: 407 SNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTC 466

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
            + DK  +L  +M +  +  + I F+ ++    +     +   L   M  I + P+ +  
Sbjct: 467 DKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTY 526

Query: 453 SIVVD 457
           + ++D
Sbjct: 527 NTLID 531



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 218/460 (47%), Gaps = 16/460 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAA--LFTKLRVFGC---EPDVFTYTTL 64
           V  R+LK     D  +   L + L   +R   A A  LF ++   G     P++ TY  +
Sbjct: 49  VFDRLLKR---GDRASIFDLNRALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIV 105

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           + G CR    +  L+L           G+  EPN +  ++    LC  G      +++L+
Sbjct: 106 I-GCCRR---LGRLDLAFATVGRVITTGLRHEPNPLQSSSQ-GPLCTAGGRAMRMDIVLR 160

Query: 125 -MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQP-NVVTFNVIMDELCK 181
            M +   KP++ +YT +++G C  K   +A  L   M D +G  P +VV +  +++ L +
Sbjct: 161 RMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLR 220

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D+A  L D M+  G  PD  TY++++     T  ++ A ++F  M   G       
Sbjct: 221 EGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIM 280

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++GYC + + + A+ ++ +M   G++PDVV +  L   L +  +   A K+FD + 
Sbjct: 281 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 340

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G   D+ TY T + G    G +VE  +L   +     +     +N ++    K  +++
Sbjct: 341 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 400

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL +F ++    L P++V Y  ++  LC  G++D A   F  ++   + PN++ F  LI
Sbjct: 401 EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLI 460

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G    ++  KV EL  +M +  +  D    + ++  L K
Sbjct: 461 HGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCK 500



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 6/241 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  ++      +++ EA  +F+ +R  G  PD+  Y T+++ LC       AL+ F  + 
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 445

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
           +          PN V +TT+I GLC     DK +EL  +M D+ I  + + + +++   C
Sbjct: 446 SEG------LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLC 499

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                 EAK LF  M+  G++PN  T+N ++D  C +GKMDEA +LL +M+ +GV+P   
Sbjct: 500 KKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDV 559

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYNT+++G+   GR+     L   M+  G    + +Y +L+ G  +      A  LY  M
Sbjct: 560 TYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619

Query: 266 L 266
           +
Sbjct: 620 I 620



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 159/330 (48%), Gaps = 7/330 (2%)

Query: 156 LFIEMMDQGV---QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           LF  M   G     PN+ T+ +++    + G++D A   +  +I  G+R +     +   
Sbjct: 83  LFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQ 142

Query: 213 GFCLT--GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS-KG 269
           G   T  GR      +   M  +GCK  +FSY+IL+ G C +K  + AL L   M   KG
Sbjct: 143 GPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKG 202

Query: 270 IKP-DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
             P DVV + T+  GL    Q+++A+ LFD M   G + D  TY + I  L K   + +A
Sbjct: 203 RCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKA 262

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            ++F  +       D   Y SL+ G C SG+ + A+ +F+ +    + P+VVTY+ ++  
Sbjct: 263 TQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDY 322

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC +G+  +AR +F  + +    P+  T+  L+ G+       ++ +LL  M +  +   
Sbjct: 323 LCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLG 382

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
             I ++++   AK+     +L  F+   QQ
Sbjct: 383 HHIFNMIMGAYAKHNKVDEALLVFSNMRQQ 412



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 10/294 (3%)

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT---VFSYS 243
           +A ++ D +++ G R   F  N  L           A  LF  M   G       + +Y 
Sbjct: 45  DAHQVFDRLLKRGDRASIFDLNRALSDVARASPAV-AISLFNRMPRAGATSAAPNIATYG 103

Query: 244 ILINGYCKN-KEIEGALSLYSEMLSKGIK--PDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           I+I G C+    ++ A +    +++ G++  P+ +  ++         +  R   +   M
Sbjct: 104 IVI-GCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRM 162

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK--CEFDIRAYNSLIDGLCKSG 358
              G   D ++Y   + GLC +    +A++L H +   K  C  D+ AY ++I+GL + G
Sbjct: 163 PELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREG 222

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           +L+ A  LF ++      P+VVTYS +I  L     MDKA  +F  M +N V+P+ I + 
Sbjct: 223 QLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYT 282

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
            L+ G+    +P + I +  KM    V PD    + ++D L KN  S  +   F
Sbjct: 283 SLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 336



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 41/230 (17%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V    +V   + +    PD V + +++  LC   R+ +A + F  L+  G  P++  +T
Sbjct: 398 KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFT 457

Query: 63  TLVNGLC-----------------------------------RTSHTIVALNLFEEMANG 87
           TL++GLC                                   +    I A NLF+ M   
Sbjct: 458 TLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR- 516

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                +  EPNT TY T+IDG C +G +D+A +LL  M    +KP+ VTY ++I G+   
Sbjct: 517 -----IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQN 571

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
               +   L  EM  +GV P +VT+ +++  L + G+   A  L   MI+
Sbjct: 572 GRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/414 (32%), Positives = 222/414 (53%), Gaps = 16/414 (3%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A +LF +L      P    +  ++  L ++ H    L L ++M     EF  + +PN V
Sbjct: 45  DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKM-----EFRGI-KPNLV 98

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY----------AKDW 150
               +I+  C+ G +  A  +L ++     KPN +T  ++I+G C               
Sbjct: 99  NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
            +A  LF +M+ + + P+V TF +++D  CK G++ EA  +L +M+  G++P   TYN+L
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           +DG+ L  +VN AK +F +M  +G    + SYSILING+CK K ++ A+ L  EM  K I
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P+VV +++L  GL +  ++  A KL DEM   G   +  TY + +D LCKN  +  A+ 
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIA 338

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   ++    + ++  Y  LI GLC+SG+LE A ++F  L       NV TY++MI G C
Sbjct: 339 LLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFC 398

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           + G  D+A  L   ME+N  +PN  T++++I    + +E     +LL +M E N
Sbjct: 399 DKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETN 452



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 203/408 (49%), Gaps = 16/408 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +  R+L+   TP  + F  ++  L           L  K+   G +P++     L+N  C
Sbjct: 49  LFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFC 108

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD-- 127
           +  H   A ++  ++     + G   +PNT+T  T+I GLC  G +     ++ ++KD  
Sbjct: 109 QLGHIPSAFSVLTKIL----KMGY--KPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 128 --------KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
                   +NI P+V T+T ++ GFC      EAK +   MM QG++P VVT+N +MD  
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
               ++++A  + + M Q GV PD  +Y+ L++GFC    ++ A EL   M        V
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +YS LI+G CK+ +I  AL L  EM  +G  P++V ++++   L + HQV+ A  L  +
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+  G+  + +TY   I GLC++G + +A ++F  L +     ++  Y  +I G C  G 
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            + AL L   +     +PN  TY I+I  L    + + A  L  +M E
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 202/398 (50%), Gaps = 17/398 (4%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A++LF  +   N        P  + +  I+  L K         L  +M+ + IKPN+V 
Sbjct: 46  AVSLFNRLLQQNPT------PPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 99

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK----------MD 186
              +I  FC       A  +  +++  G +PN +T N ++  LC NGK          + 
Sbjct: 100 CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLK 159

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A  L + MI   + PD +T+  L+DGFC  GRV  AK +   M   G K  V +Y+ L+
Sbjct: 160 DAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM 219

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +GY   K++  A S+++ M   G+ PD+  ++ L  G  +I  ++ A +L  EM    + 
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY + IDGLCK+G I  A++L   +       +I  Y+S++D LCK+ +++ A+ L
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
              +    + PN+ TY+I+I GLC  G+++ AR +F D+       NV T+ ++I+GF  
Sbjct: 340 LTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCD 399

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVV-DLLAKNE 463
                + + LL KM++   +P+A    I++  L  K+E
Sbjct: 400 KGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDE 437



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 175/339 (51%), Gaps = 39/339 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIM----------EAAALFTKLR 50
           +G +   F VL +ILK  + P+ +T  +LIKGLC   +I           +A  LF K+ 
Sbjct: 110 LGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMI 169

Query: 51  VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC--------------- 95
           +    PDV+T+T LV+G C+      A N+   M     + GVV                
Sbjct: 170 LENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVN 229

Query: 96  --------------EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
                          P+  +Y+ +I+G CK   +D+A ELL +M  K I PNVVTY+S+I
Sbjct: 230 KAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLI 289

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +   + A +L  EM D+G  PN+VT++ I+D LCKN ++D A  LL  M   G++
Sbjct: 290 DGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQ 349

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+ +TY  L+ G C +G++  A+++F  +   G    V++Y+++I G+C     + AL+L
Sbjct: 350 PNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTL 409

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            S+M   G  P+   +  + + LF+  + E A KL  EM
Sbjct: 410 LSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 148/284 (52%), Gaps = 6/284 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     VL  ++     P  VT+ SL+ G     ++ +A ++F  +   G  PD+ +Y
Sbjct: 191 GRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSY 250

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+NG C+      A+ L +EM +          PN VTY+++IDGLCK G +  A +L
Sbjct: 251 SILINGFCKIKMMDEAMELLKEMHHKQ------IIPNVVTYSSLIDGLCKSGKISYALKL 304

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M D+   PN+VTY+S++   C     + A  L  +M +QG+QPN+ T+ +++  LC+
Sbjct: 305 VDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQ 364

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +GK+++A ++ + ++  G   + +TY  ++ GFC  G  + A  L   ME  GC     +
Sbjct: 365 SGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKT 424

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           Y I+I    K  E E A  L  EM+       V + N L   ++
Sbjct: 425 YEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIW 468



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 175/358 (48%), Gaps = 45/358 (12%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           VD A  L  ++  +N  P  + +  ++     +K ++    L  +M  +G++PN+V  N+
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG----------RVNHAK 224
           +++  C+ G +  A  +L  +++ G +P+  T NTL+ G CL G          ++  A 
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +LF  M        V++++IL++G+CK   ++ A ++ + M+ +GIKP VV         
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVV--------- 213

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
                                     TY + +DG      + +A  +F+T+  L    DI
Sbjct: 214 --------------------------TYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDI 247

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           ++Y+ LI+G CK   ++ A+EL + +    ++PNVVTYS +I GLC  G++  A  L  +
Sbjct: 248 QSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDE 307

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           M +    PN++T+  ++    + ++    I LL +MK   + P+    +I++  L ++
Sbjct: 308 MHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQS 365



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 151/307 (49%), Gaps = 10/307 (3%)

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N  +D+A  L + ++Q    P    +N +L     +   +    L   ME  G K  + +
Sbjct: 40  NNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 99

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF---EIH-------QVE 291
            +ILIN +C+   I  A S+ +++L  G KP+ +  NTL  GL    +IH       +++
Sbjct: 100 CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLK 159

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A  LF++M    +  D +T+   +DG CK G + EA  +   + I   +  +  YNSL+
Sbjct: 160 DAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM 219

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG     ++  A  +F ++    + P++ +YSI+I G C    MD+A +L  +M    ++
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
           PNV+T+  LI G  +  + S  ++L+ +M +    P+    S ++D L KN    N++  
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339

Query: 472 FTVHEQQ 478
            T  + Q
Sbjct: 340 LTQMKNQ 346



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 6/198 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT++SLI GLC   +I  A  L  ++   G  P++ TY+++++ LC+      A+ L
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M N     G+  +PN  TYT +I GLC+ G ++ A+++   +  K    NV TYT +
Sbjct: 340 LTQMKNQ----GI--QPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVM 393

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I+GFC    ++EA  L  +M D G  PN  T+ +I+  L K  + + A +LL  MI+   
Sbjct: 394 IQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNF 453

Query: 201 RPDAFTYNTLLDGFCLTG 218
                  N L+    +TG
Sbjct: 454 DGRVALTNDLIASIWVTG 471


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 240/456 (52%), Gaps = 7/456 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   + +  ++     +P      SLI+G        EA+ LF +    G   +VFTY
Sbjct: 378 GNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTY 436

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++ LC+      A +++E+M       GV   P+ V+Y  +I G C++G +D A  +
Sbjct: 437 NSLLSWLCKEGKMSEACSIWEKMVRK----GV--RPSVVSYNNMILGHCQQGDMDSANGV 490

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            ++M +K +KPN++TY+ ++ G+    D   A  L+  M  + + P+  T N+I++ LCK
Sbjct: 491 FVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCK 550

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+  E+   L  ++Q G  P   TYN ++DGF   G VN A  ++  M  +G    VF+
Sbjct: 551 AGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFT 610

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LING+CK+  ++ AL +  EM +KGI+ DV ++  L  G      +  A +L  E+Q
Sbjct: 611 YTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQ 670

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G++ +   Y + I G  K   +  A+ L   +       D++ Y +LI GL K G+L 
Sbjct: 671 EVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLL 730

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL+  +    ++P+++TYS++I GLCN GQ++ A+ +  DM+   + P V  ++ LI
Sbjct: 731 FASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLI 790

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            G  +     +   L ++M +  ++PD +   I+V+
Sbjct: 791 TGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVN 826



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 228/444 (51%), Gaps = 9/444 (2%)

Query: 19  FTPDAVTFTSLIKGLC-AESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           + P  V FT +I G+C  + +++EA  +  ++   G   +V   TTL+ G C+      A
Sbjct: 290 WVPHEVIFTRVI-GVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSA 348

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           L LF++M N NG    +C PN VTY  II+  CK G +DKA E+  QMK+K+I P V   
Sbjct: 349 LELFDKM-NENG----IC-PNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNV 402

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            S+IRG+  A+   EA +LF E +  G+  NV T+N ++  LCK GKM EA  + + M++
Sbjct: 403 NSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVR 461

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            GVRP   +YN ++ G C  G ++ A  +FV M   G K  + +YS+L++GY K  + E 
Sbjct: 462 KGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEY 521

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  LY  M  + I P     N +  GL +  +   +     ++ + G      TY   ID
Sbjct: 522 AFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIID 581

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G  K G +  A+ ++  +  +    ++  Y +LI+G CKS  +++AL++   +    +  
Sbjct: 582 GFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIEL 641

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +V  Y  +I G C  G M  A  L  +++E  + PN + +  +I GF ++      + L 
Sbjct: 642 DVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLH 701

Query: 438 HKMKEINVMPDASIVSIVVDLLAK 461
            +M    +  D  I + ++  L K
Sbjct: 702 KRMINEGIPCDLQIYTTLISGLLK 725



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 199/394 (50%), Gaps = 6/394 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    +  ++++    P  V++ ++I G C +  +  A  +F ++   G +P++ TY
Sbjct: 447 GKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITY 506

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++G  +   T  A  L++ M   N        P+  T   II+GLCK G   ++++ 
Sbjct: 507 SVLMDGYFKKGDTEYAFGLYDRMRGEN------IAPSDFTCNIIINGLCKAGRTSESQDR 560

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++  +   P  +TY  +I GF      N A  ++ EM   GV PNV T+  +++  CK
Sbjct: 561 LKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCK 620

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +  MD A +++D M   G+  D   Y  L+DGFC  G + +A +L   ++ +G       
Sbjct: 621 SNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVV 680

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+G+ K + +E AL L+  M+++GI  D+ I+ TL  GL +  ++  A +L+ EM 
Sbjct: 681 YSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEML 740

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  TY   I GLC  G +  A ++   +        +  YN+LI G  K G L+
Sbjct: 741 AKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQ 800

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
            A  L   +    LVP+  TY I++ G   DG +
Sbjct: 801 EAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 224/468 (47%), Gaps = 20/468 (4%)

Query: 9   VVLGRILKSC----FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           VV+ R+++S     F  D+  F  L+       RI +A   F  L     E D+    T+
Sbjct: 136 VVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSL----IEKDIVPCLTV 191

Query: 65  VN----GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +N     L + +    A +++ +MA+     GV  + +  T + +I    +EG +++A+ 
Sbjct: 192 MNIFLSELVKNNMIREARDVYNKMASK----GV--KGDCATISVMIRASMREGKLEEAEG 245

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              + K+K ++ +   Y+ VI   C   D   A  L  EM D+G  P+ V F  ++    
Sbjct: 246 WFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCM 305

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GKM EA ++   M+  G   +     TL+ G+C  G ++ A ELF  M   G      
Sbjct: 306 KQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNV 365

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I   CKN  ++ A  +Y++M +K I P V   N+L  G  +    E A KLFDE 
Sbjct: 366 TYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEA 425

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+A + +TY + +  LCK G + EA  ++  +        + +YN++I G C+ G +
Sbjct: 426 VACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDM 484

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +F  +    L PN++TYS+++ G    G  + A  L+  M    + P+  T +++
Sbjct: 485 DSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNII 544

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           I G  +    S+  + L K+ +   +P     + ++D   K E S+NS
Sbjct: 545 INGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVK-EGSVNS 591



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 208/432 (48%), Gaps = 13/432 (3%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           C T   +  + L+K     + I EA  ++ K+   G + D  T + ++    R      A
Sbjct: 188 CLTVMNIFLSELVK----NNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEA 243

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
              F E  N   E       +   Y+ +I+ +CK+     A  LL +M+DK   P+ V +
Sbjct: 244 EGWFREAKNKGVEL------DARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIF 297

Query: 138 TSVIRGFCYAK-DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           T VI G C  +    EA ++  EM+  G   NVV    +M   CK G +D A  L D M 
Sbjct: 298 TRVI-GVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMN 356

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           ++G+ P+  TY  +++  C  G ++ A E++  M++     TVF+ + LI GY K +  E
Sbjct: 357 ENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPE 416

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  L+ E ++ GI  +V  +N+L   L +  ++  A  ++++M R GV     +Y   I
Sbjct: 417 EASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMI 475

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            G C+ G +  A  +F  +     + ++  Y+ L+DG  K G  E A  L+  +    + 
Sbjct: 476 LGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIA 535

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+  T +I+I GLC  G+  +++D    + +   +P  +T++ +I GF++    +  + +
Sbjct: 536 PSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAV 595

Query: 437 LHKMKEINVMPD 448
             +M +I V P+
Sbjct: 596 YTEMCKIGVSPN 607



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 67/144 (46%)

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
           V    L  + R L  E D R +N L++   K+ R+  A++ F SL    +VP +   +I 
Sbjct: 136 VVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIF 195

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           +  L  +  + +ARD++  M    V  +  T  ++IR  +R  +  +      + K   V
Sbjct: 196 LSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGV 255

Query: 446 MPDASIVSIVVDLLAKNEISLNSL 469
             DA   SIV++ + K   S+ +L
Sbjct: 256 ELDARAYSIVIEAVCKKPDSVAAL 279


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 234/460 (50%), Gaps = 6/460 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G   L  + K    P+   +  LI GLC E RI +A  +F ++        + TY TL++
Sbjct: 195 GMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLID 254

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G C+      A  + E M   +        PN +T+ +++ GLCK   + +A+ LL +M+
Sbjct: 255 GYCKVGELDAAFKMRERMKEKS------VAPNIITFNSLLSGLCKMRKMKEARSLLKEME 308

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
                P+  TY+ +  G     D N A  L+ +  ++G++ N  T +++++ LCK GK++
Sbjct: 309 VNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVE 368

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A  +L    ++G+  D   YNT ++G+C  G +N A      MES G +    +++ LI
Sbjct: 369 KAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLI 428

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           + +C  KE++ A     +M  KG+ P V  +NTL  G  ++   +R F++ ++M+  GV 
Sbjct: 429 DKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVK 488

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  +Y + I+ LCK+G I+EA  +   +       + + YN LIDG C  G+++ AL  
Sbjct: 489 PNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRF 548

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  +    + P +VTY+++I GLC  G++ +A D    +  +   P+VIT++ LI G+  
Sbjct: 549 FDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYAN 608

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
               SK + L   MK + + P       ++   +K  I L
Sbjct: 609 AGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIEL 648



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 139/449 (30%), Positives = 236/449 (52%), Gaps = 9/449 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  R+ +    P+ +TF SL+ GLC   ++ EA +L  ++ V G  PD +T
Sbjct: 259 VGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYT 318

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L +GL R      A+ L+E+      E G+    N  T + +++GLCK+G V+KA+E
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQAT----EKGI--RINNYTGSILLNGLCKQGKVEKAEE 372

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDEL 179
           +L +  +  +  + V Y + + G+C   D N+A  L IE M+  G++PN +TFN ++D+ 
Sbjct: 373 ILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAI-LTIERMESFGLRPNSITFNSLIDKF 431

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C   +MD+A   +  M + GV P   TYNTL+DG+      +   ++   ME +G K  V
Sbjct: 432 CDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNV 491

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY  LIN  CK+ +I  A  +  +M+ +G+ P+  ++N L  G   + +V+ A + FDE
Sbjct: 492 VSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDE 551

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M R+ ++    TY   IDGLCK G + EA +    +       D+  YNSLI G   +G 
Sbjct: 552 MMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGN 611

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +   L L+ ++    + P V TY  +I G   +G ++    L+ +M +  ++P+ + ++ 
Sbjct: 612 VSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNA 670

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +I  +  I    K   L   M +  + PD
Sbjct: 671 MIHCYAEIGNTQKAYSLHQGMLDQGIHPD 699



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 209/432 (48%), Gaps = 22/432 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G ++   + + R+      P+++TF SLI   C    + +A     K+   G  P V T
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVET 458

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G  +         + E+M     E GV  +PN V+Y ++I+ LCK+G + +A+ 
Sbjct: 459 YNTLIDGYGKLCTFDRCFQILEQME----EIGV--KPNVVSYGSLINCLCKDGKILEAEI 512

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  M  + + PN   Y  +I G C      +A R F EMM   + P +VT+NV++D LC
Sbjct: 513 VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLC 572

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA   L  +   G  PD  TYN+L+ G+   G V+    L+ +M+++G K TV 
Sbjct: 573 KKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVR 632

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI+G C  + IE    LY+EML   + PD V++N +     EI   ++A+ L   M
Sbjct: 633 TYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGM 691

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D  TY + I G  + G +    +L + ++  +       Y+ L+ G C     
Sbjct: 692 LDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDF 751

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A   +R +     +PN    + +  GL  +G++ + +              VI  +M 
Sbjct: 752 SGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQ--------------VICSEMN 797

Query: 421 IRGFIRINEPSK 432
           ++G I  + PSK
Sbjct: 798 VKGIIN-HWPSK 808



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 173/346 (50%)

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           K  +L +++++   + +   Y   I+     ++          M  +GV+PNV  +NV++
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             LC+  ++ +A ++ D M    +     TYNTL+DG+C  G ++ A ++   M+     
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             + +++ L++G CK ++++ A SL  EM   G  PD   ++ LF GL        A +L
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           +++    G+  + +T    ++GLCK G + +A E+           D   YN+ ++G C+
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G +  A+     +    L PN +T++ +I   C+  +MDKA +    M E  V P+V T
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVET 458

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++ LI G+ ++    +  ++L +M+EI V P+      +++ L K+
Sbjct: 459 YNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKD 504



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 159/348 (45%), Gaps = 41/348 (11%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F +L ++ +    P+ V++ SLI  LC + +I+EA  +   +   G  P+   Y  L++G
Sbjct: 476 FQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDG 535

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
            C       AL  F+EM            P  VTY  +IDGLCK+G + +A++ L Q+  
Sbjct: 536 SCMVGKVKDALRFFDEMMRSE------ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITS 589

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF--------------- 172
               P+V+TY S+I G+  A + ++   L+  M + G++P V T+               
Sbjct: 590 SGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELV 649

Query: 173 ----------NVIMDELCKN---------GKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
                     N++ D +  N         G   +A  L   M+  G+ PD  TYN+L+ G
Sbjct: 650 EKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILG 709

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
               G++++ K+L  +M++        +Y IL+ G+C  K+  GA   Y EM+     P+
Sbjct: 710 HFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPN 769

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             I N L  GL +  +++    +  EM   G+  + W  +  I  + K
Sbjct: 770 ASICNELTAGLEQEGRLQEVQVICSEMNVKGI-INHWPSKEEISAVAK 816



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 125/252 (49%)

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           LL   C +  +  A EL+  M   G   ++ S S+L +     K+    + L+ E+ + G
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSG 171

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
            + D  ++        ++  ++   +  D M++ GV  + + Y   I GLC+   I +A 
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAE 231

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           ++F  +  +     I  YN+LIDG CK G L+ A ++   +    + PN++T++ ++ GL
Sbjct: 232 KMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGL 291

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C   +M +AR L  +ME N  +P+  T+ +L  G +R ++ +  +EL  +  E  +  + 
Sbjct: 292 CKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINN 351

Query: 450 SIVSIVVDLLAK 461
              SI+++ L K
Sbjct: 352 YTGSILLNGLCK 363


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 221/410 (53%), Gaps = 9/410 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     VL R+     +P+A T+ +++  LC   ++ +A  +  +     C PDV T 
Sbjct: 163 GEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTC 219

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++  C+ S    A+ LF EM N        C+P+ VTY  +I G CK G +D+A   
Sbjct: 220 TVLIDATCKESGVGQAMKLFNEMRNKG------CKPDVVTYNVLIKGFCKGGRLDEAIRF 273

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++     +P+V+++  ++R  C    W +A +L   M+ +G  P+VVTFN++++ LC+
Sbjct: 274 LKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQ 333

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A  +L++M +HG  P++ ++N L+ GFC    ++ A E    M S GC   + +
Sbjct: 334 KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVT 393

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+IL+   CK+ +++ A+ + S++ SKG  P ++ +NT+  GL ++ + E A +L +EM 
Sbjct: 394 YNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMC 453

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  T  + + GL + G + EA++ FH L+      +   YNS+I GLCKS +  
Sbjct: 454 YKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTS 513

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           +A++    +      P   TY+ +I G+  +G  + A  L  ++    +V
Sbjct: 514 LAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 220/437 (50%), Gaps = 9/437 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD +  T+LI+  C   R   A+ +   L   G   DV +Y  L++G C++     AL 
Sbjct: 111 SPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALR 170

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + + M       GV   PN  TY  ++  LC  G + +A ++L +       P+VVT T 
Sbjct: 171 VLDRM-------GV--SPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTV 221

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C      +A +LF EM ++G +P+VVT+NV++   CK G++DEA R L  +  +G
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            +PD  ++N +L   C  GR   A +L  +M   GC  +V +++ILIN  C+   +  AL
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKAL 341

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           ++   M   G  P+    N L  G      ++RA +  + M   G   D  TY   +  L
Sbjct: 342 NVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTAL 401

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK+G + +AV +   L    C   + +YN++IDGL K G+ E+A+EL   +    L P++
Sbjct: 402 CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL 461

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +T + ++GGL  +G++ +A   F  ++  A+ PN   ++ +I G  +  + S  I+ L  
Sbjct: 462 ITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLAD 521

Query: 440 MKEINVMPDASIVSIVV 456
           M      P  +  + ++
Sbjct: 522 MVAKGCKPTEATYTTLI 538



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 197/411 (47%), Gaps = 9/411 (2%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  PDV   T L+   C+   T  A  +   +     E G V +    +Y  +I G CK 
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGILE----ESGAVID--VTSYNVLISGYCKS 162

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G +++A  +L +M    + PN  TY +V+   C      +A ++    +     P+VVT 
Sbjct: 163 GEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTC 219

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
            V++D  CK   + +A +L + M   G +PD  TYN L+ GFC  GR++ A      + S
Sbjct: 220 TVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS 279

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            GC+  V S+++++   C       A+ L + ML KG  P VV  N L   L +   + +
Sbjct: 280 YGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGK 339

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  + + M ++G   ++ ++   I G C    I  A+E    +    C  DI  YN L+ 
Sbjct: 340 ALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLT 399

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            LCK G+++ A+ +   L      P++++Y+ +I GL   G+ + A +L  +M    + P
Sbjct: 400 ALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 459

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           ++IT   ++ G  R  +  + ++  H +K   + P+A I + ++  L K++
Sbjct: 460 DLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQ 510


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 230/446 (51%), Gaps = 19/446 (4%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           TF+ LI          +A   F K++ FGC+PDVFTY ++++ + +    ++AL ++ +M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
              N        PN  T+  +++GLCK G  D A ++  +M  K I PN + YT ++ G 
Sbjct: 193 LKLNYN------PNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGL 246

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C AK  ++  RL   M   G  P+ +T N ++D  CK G++DEA  LL L  + G     
Sbjct: 247 CQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGI 306

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             Y++L+DG     R +  +E    M   G +  V  Y+ILI G+C+   ++ AL++ ++
Sbjct: 307 KGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLND 366

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  +G+ PD   +N L  G  ++  +++A  L  E+ +N     + TY   I G+C+NG 
Sbjct: 367 MTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGL 426

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV---------- 374
           + EA ++F+ +  L C   I  +N+LIDGLCK+G LE A  LF  +  G           
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQ 486

Query: 375 ---LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
               V +  +   M+  LC  G + KA  L + + ++ VVP+++T+++LI GF +    +
Sbjct: 487 GADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNIN 546

Query: 432 KVIELLHKMKEINVMPDASIVSIVVD 457
              +L  +++     PD+     ++D
Sbjct: 547 GAFKLFRELQLKGHSPDSVTYGTLID 572



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 227/488 (46%), Gaps = 55/488 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   F +L    K  +      ++SLI GL    R  E      K+   G EPDV  
Sbjct: 284 LGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVL 343

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ G C       ALN+  +M            P+T  Y  +I G C  G +DKA+ 
Sbjct: 344 YTILIRGFCEVGMVDYALNMLNDMTQRG------LSPDTYCYNALIKGFCDVGLLDKARS 397

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L++   +  P   TYT +I G C     +EA+++F +M + G  P+++TFN ++D LC
Sbjct: 398 LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLC 457

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAF--------------TYNTLLDGFCLTGRVNHAKEL 226
           K G+++EA  L   M + G  P  F              +  T+++  C +G +  A +L
Sbjct: 458 KAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKL 516

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
            + +   G    + +Y++LING+CK K I GA  L+ E+  KG  PD V + TL  G   
Sbjct: 517 LMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHR 576

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF------------HT 334
           + + E AF++ D+M +NG    +  Y+  +   C+ G +  A  L+             T
Sbjct: 577 VDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDET 636

Query: 335 LRI-------------LKC---------EFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
           L++             ++C          F+I  Y   + GLC++ R E AL++F  L  
Sbjct: 637 LKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKE 696

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             +  N  +  ++I GLC DG ++ A D+FL   E   +      + L+R  I  ++   
Sbjct: 697 CQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKH 756

Query: 433 VIELLHKM 440
            ++LL++M
Sbjct: 757 ALDLLNRM 764



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 159/328 (48%)

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           VT+  VI        ++   ++  E+ +  +Q    TF+V++    K+G  ++A      
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   G +PD FTYN++L           A  ++  M  +       ++ IL+NG CKN +
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            + AL ++ EM  KGI P+ +I+  +  GL +  + +   +L + M+ +G   D+ T   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +DG CK G I EA  L            I+ Y+SLIDGL ++ R +   E  R +    
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + P+VV Y+I+I G C  G +D A ++  DM +  + P+   ++ LI+GF  +    K  
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
            L  ++ + +  P +   +I++  + +N
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRN 424



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 152/371 (40%), Gaps = 77/371 (20%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           CF P + T+T LI G+C    + EA  +F ++   GC P + T+  L++GLC+      A
Sbjct: 407 CF-PTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465

Query: 78  LNLFEEMANGNGEF-------GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
            +LF +M  G           G     +T +  T+++ LC+ G + KA +LL+Q+ D  +
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGV 525

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV---------------- 174
            P+++TY  +I GFC AK+ N A +LF E+  +G  P+ VT+                  
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585

Query: 175 IMDELCKNG-------------------------------------KMDEASRLLDLMIQ 197
           ++D++ KNG                                     + DE  +L +   +
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFE 645

Query: 198 HGVRPDAF----------------TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A                  Y   L G C   R   A ++F+ ++         S
Sbjct: 646 KGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPS 705

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
             +LING CK+  +E A+ ++   L KG      I N L   L    +++ A  L + M 
Sbjct: 706 CVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMN 765

Query: 302 RNGVAADTWTY 312
             G   D + +
Sbjct: 766 SAGYDLDEYLH 776



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 40/267 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   + +L ++  S   PD +T+  LI G C    I  A  LF +L++ G  PD  TY
Sbjct: 508 GLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTY 567

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF------- 114
            TL++G  R      A  + ++M   NG     C P++  Y  ++   C++G        
Sbjct: 568 GTLIDGFHRVDREEDAFRVLDQMVK-NG-----CTPSSAVYKCLMTWSCRKGKLSVAFSL 621

Query: 115 ---------------------------VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                                      ++KA   LL+M  K     +  YT  + G C A
Sbjct: 622 WLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQA 681

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           +   EA ++F+ + +  +  N  +  ++++ LCK+G ++ A  +    ++ G        
Sbjct: 682 RRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRIC 741

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMG 234
           N LL    L  ++ HA +L   M S G
Sbjct: 742 NQLLRSLILQDKMKHALDLLNRMNSAG 768


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 243/542 (44%), Gaps = 76/542 (14%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R   G    GR+L++    D     +++K LC   R  +A   L  ++   GC PD F+Y
Sbjct: 23  RPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSY 82

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG------------- 108
             ++  LC  + +  AL+L   MA   G    VC P+ VTY T+I G             
Sbjct: 83  AIVLKRLCDDNRSQQALDLLRMMAKEEG----VCSPDVVTYNTVIHGFFKEGKIGKACNL 138

Query: 109 ----------------------LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                                 LCK   VD A+ LL QM D  + PN VTYTS+I G+  
Sbjct: 139 YHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYST 198

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              W EA ++F EM  +G+ P++V++N  MD LCK+G+  EA+ +   M   G RP+  T
Sbjct: 199 LGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVT 258

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  LL G+   G        F +M+  G       ++ILI+ Y K   ++ A+ + SEM 
Sbjct: 259 YGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQ 318

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +G+ PDV  ++TL   L  + ++  A   F++M   GV  +T  Y + I G C +G +V
Sbjct: 319 GQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLV 378

Query: 327 EAVELFHTL------------------------RILKCEF------------DIRAYNSL 350
           +A EL + +                        R++                DI  +N+L
Sbjct: 379 KAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTL 438

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           IDG C  G +  A  +  ++    + P+  TY+ ++ G    G++D   +LF +M +  +
Sbjct: 439 IDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKI 498

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
            P  +T+++++ G  R        ++LH+M            +I++  L +N  +  ++ 
Sbjct: 499 KPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIV 558

Query: 471 SF 472
            F
Sbjct: 559 MF 560



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/476 (31%), Positives = 231/476 (48%), Gaps = 42/476 (8%)

Query: 6   HGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG+  LGR  ++             PD V++ S +  LC   R  EAA +F  +   G  
Sbjct: 194 HGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHR 253

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNG----------------EFGVVCE--- 96
           P++ TY  L++G          ++ F  M  G+G                + G++ E   
Sbjct: 254 PNIVTYGILLHGYATEGCFADMMSFFNTM-KGDGIVANCLVFTILIDAYAKRGMMDEAML 312

Query: 97  -----------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                      P+  TY+T+I  LC+ G +  A +   QM    ++PN V Y S+I+GFC
Sbjct: 313 ILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFC 372

Query: 146 YAKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
              D  +AK L  EMM+ G+ +PN+  FN I+  +CK G++ +A  + DL+   G R D 
Sbjct: 373 THGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDI 432

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             +NTL+DG+CL G +  A  +  +M S G     F+Y+ L+NGY K+  I+  L+L+ E
Sbjct: 433 IMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFRE 492

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  K IKP  V +N +  GLF   +   A K+  EM   G      TY   + GLC+N  
Sbjct: 493 MSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNC 552

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
             EA+ +F  L  +  +F+I   N++I+ +    R E A +LF ++    LVPN  TY I
Sbjct: 553 TDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGI 612

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           MI  L  +G +++A ++F  ME++   P     +  IR  +   E  K    + K+
Sbjct: 613 MIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 237/490 (48%), Gaps = 29/490 (5%)

Query: 4   VSHGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 53
           V HGF   G+I K+C          F PD VT  S+I  LC    +  A  L  ++   G
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
             P+  TYT++++G         A  +F EM  G G       P+ V++ + +D LCK G
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMT-GRGLI-----PDIVSWNSFMDSLCKHG 235

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
              +A E+   M  K  +PN+VTY  ++ G+     + +    F  M   G+  N + F 
Sbjct: 236 RSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFT 295

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           +++D   K G MDEA  +L  M   G+ PD FTY+TL+   C  GR+  A + F  M   
Sbjct: 296 ILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGT 355

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIHNTLFVGLFEIHQVER 292
           G +     Y  LI G+C + ++  A  L  EM++ GI +P++   N++   + +  +V  
Sbjct: 356 GVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMD 415

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  +FD ++  G  +D   + T IDG C  G + +A  +   +       D   YN+L++
Sbjct: 416 AHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVN 475

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G  KSGR++  L LFR +    + P  VTY+I++ GL   G+   A+ +  +M       
Sbjct: 476 GYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTV 535

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           ++ T++++++G  R N   + I +  K+  +NV  + + ++ ++          NS+  +
Sbjct: 536 SLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMI----------NSM--Y 583

Query: 473 TVHEQQEEVD 482
           TV  ++E  D
Sbjct: 584 TVQRREEAKD 593



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 201/435 (46%), Gaps = 33/435 (7%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEM------ANGNGEFGVV--------------- 94
           P +FTY  ++NG CR     + L  F  +      A+      V+               
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 95  ---------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNI-KPNVVTYTSVIRG 143
                    C P+  +Y  ++  LC +    +A +LL  M K++ +  P+VVTY +VI G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           F       +A  L+ EMM QG  P+VVT N I++ LCK   +D A  LL  M+ +GV P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             TY +++ G+   GR   A ++F  M   G    + S++  ++  CK+   + A  ++ 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            M +KG +P++V +  L  G             F+ M+ +G+ A+   +   ID   K G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + EA+ +   ++      D+  Y++LI  LC+ GRL  A++ F  +    + PN V Y 
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVV-PNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
            +I G C  G + KA++L  +M  N +  PN+  F+ ++    +         +   +K+
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKD 425

Query: 443 INVMPDASIVSIVVD 457
           I    D  + + ++D
Sbjct: 426 IGERSDIIMFNTLID 440



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 175/359 (48%), Gaps = 5/359 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    ++L  +     +PD  T+++LI  LC   R+ +A   F ++   G +P+   Y
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ G C     + A  L  EM N NG    +  PN   + +I+  +CKEG V  A  +
Sbjct: 365 HSLIQGFCTHGDLVKAKELVYEMMN-NG----IPRPNIAFFNSIVHSICKEGRVMDAHHI 419

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +KD   + +++ + ++I G+C   +  +A  +   M+  G+ P+  T+N +++   K
Sbjct: 420 FDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFK 479

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++D+   L   M    ++P   TYN +LDG    GR   A+++   M   G   ++ +
Sbjct: 480 SGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPT 539

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I++ G C+N   + A+ ++ ++ +  +K ++   NT+   ++ + + E A  LF  + 
Sbjct: 540 YNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAIS 599

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +G+  +  TY   I  L K G + EA  +F ++    C    R  N  I  L + G +
Sbjct: 600 DSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEI 658



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 162/333 (48%), Gaps = 3/333 (0%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR- 190
           P + TY  V+ G C A+        F  ++  G++ +    N ++  LC   + D+A + 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILING 248
           LL  M + G  PDAF+Y  +L   C   R   A +L   M  E   C   V +Y+ +I+G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           + K  +I  A +LY EM+ +G  PDVV HN++   L +   V+ A  L  +M  NGV  +
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY + I G    G   EA ++F  +       DI ++NS +D LCK GR + A E+F 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           S+      PN+VTY I++ G   +G        F  M+ + +V N + F +LI  + +  
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              + + +L +M+   + PD    S ++  L +
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCR 338



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 160/329 (48%), Gaps = 7/329 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVF 59
           MGR++       +++ +   P+ V + SLI+G C    +++A  L  ++   G   P++ 
Sbjct: 339 MGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIA 398

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            + ++V+ +C+    + A ++F ++    GE       + + + T+IDG C  G + KA 
Sbjct: 399 FFNSIVHSICKEGRVMDAHHIF-DLVKDIGE-----RSDIIMFNTLIDGYCLVGEMGKAF 452

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +L  M    I P+  TY +++ G+  +   ++   LF EM D+ ++P  VT+N+I+D L
Sbjct: 453 SVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGL 512

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            + G+   A ++L  MI  G      TYN +L G C     + A  +F  + +M  K  +
Sbjct: 513 FRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNI 572

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            + + +IN     +  E A  L+S +   G+ P+   +  +   L +   VE A  +F  
Sbjct: 573 TTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSS 632

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           M+++G A  +      I  L + G IV+A
Sbjct: 633 MEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 9/231 (3%)

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK-L 296
           T+F+Y +++NG C+ +  E  L+ +  +L  G+K D    NT+   L    + + A K L
Sbjct: 7   TIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVL 66

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-----CEFDIRAYNSLI 351
              M   G   D ++Y   +  LC +    +A++L   LR++      C  D+  YN++I
Sbjct: 67  LRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDL---LRMMAKEEGVCSPDVVTYNTVI 123

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            G  K G++  A  L+  +     VP+VVT++ +I  LC    +D A  L   M +N V 
Sbjct: 124 HGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVP 183

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           PN +T+  +I G+  +    +  ++  +M    ++PD    +  +D L K+
Sbjct: 184 PNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKH 234


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/454 (32%), Positives = 225/454 (49%), Gaps = 21/454 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+ ++I G C   R  EA      + + G EP++ T+  ++NGLCR         +
Sbjct: 16  PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM+      G V  P+ VTY T+++G CKEG   +A  L  +M    + PNVVTYTS+
Sbjct: 76  LVEMSRK----GYV--PDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSL 129

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C A + N A   F +M  +G+ PN  T+  I++   + G +DEA R+L+ M + G 
Sbjct: 130 INSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGF 189

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P   TYN L++G C+ GR+  A  L   M   G    V SYS +I+G+ +N+E++ A  
Sbjct: 190 IPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQ 249

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +  EM+ K + PD V +++L  GL E  ++  A  +F EM    +  D +TY T I+  C
Sbjct: 250 MKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYC 309

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + +A+ L   +       D   YN LI+GL K  R + A  L   L     +P+ V
Sbjct: 310 KEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAV 369

Query: 381 TYSIMI---------------GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           TY+ +I                G C  G MD+A  +F  M      PN   ++++I G  
Sbjct: 370 TYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHC 429

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           RI    K  +L  +M  ++ +P    V  +V  L
Sbjct: 430 RIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKAL 463



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 212/389 (54%), Gaps = 6/389 (1%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
            F ++   GC P+V TY T+++G C+   T  A      M    G  G+  EPN +T+  
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSM----GLKGL--EPNLITFNM 58

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           II+GLC++G + +  E+L++M  K   P+ VTY +++ G+C   ++++A  L  EM+  G
Sbjct: 59  IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG 118

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + PNVVT+  +++ +CK G ++ A    D M   G+ P+  TY T+++GF   G ++ A 
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAY 178

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            +   M   G   ++ +Y+ LING+C    +E A+ L  +M+ KG+ PDVV ++T+  G 
Sbjct: 179 RVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               +++RAF++  EM    V  D  TY + I GLC+   + EA ++F  +  +K   D 
Sbjct: 239 ARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDE 298

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y +LI+  CK G L  AL L   +     +P+ VTY+++I GL    +  +AR L L 
Sbjct: 299 FTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLK 358

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKV 433
           +  +  +P+ +T++ LI     I   S V
Sbjct: 359 LFYDDSIPSAVTYNTLIENCCNIEFKSAV 387



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 231/476 (48%), Gaps = 21/476 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R    F  L  +      P+ +TF  +I GLC + R+ E + +  ++   G  PD  T
Sbjct: 31  LKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVT 90

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TLVNG C+  +   AL L  EM   NG       PN VTYT++I+ +CK G +++A E
Sbjct: 91  YNTLVNGYCKEGNFHQALVLHAEMVR-NG-----LSPNVVTYTSLINSMCKAGNLNRAME 144

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              QM  + + PN  TYT++I GF      +EA R+  EM   G  P++VT+N +++  C
Sbjct: 145 FFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHC 204

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+M+EA  LL  M+  GV PD  +Y+T++ GF     ++ A ++ V M          
Sbjct: 205 VLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAV 264

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS LI G C+ + +  A  ++ EML+  + PD   + TL     +   + +A  L DEM
Sbjct: 265 TYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEM 324

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVEL---------------FHTLRILKCEFDIR 345
            + G   D  TY   I+GL K     EA  L               ++TL    C  + +
Sbjct: 325 IQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFK 384

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           +  +L+ G C  G ++ A ++F S+      PN   Y+++I G C  G + KA  L+ +M
Sbjct: 385 SAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEM 444

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                VP+ +T   L++         ++ E++  +     + DA +  ++V++  K
Sbjct: 445 VHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQK 500



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 193/382 (50%), Gaps = 6/382 (1%)

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           + L  F+EM   NG     C PN VTY T+IDG CK    D+A   L  M  K ++PN++
Sbjct: 1   MGLRFFKEMER-NG-----CLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLI 54

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T+  +I G C      E   + +EM  +G  P+ VT+N +++  CK G   +A  L   M
Sbjct: 55  TFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEM 114

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +++G+ P+  TY +L++  C  G +N A E F  M   G      +Y+ +ING+ +   +
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A  + +EM   G  P +V +N L  G   + ++E A  L  +M   GV  D  +Y T 
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I G  +N  +  A ++   +       D   Y+SLI GLC+  RL  A ++F+ +    L
Sbjct: 235 ISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKL 294

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+  TY+ +I   C +G ++KA  L  +M +   +P+ +T+++LI G  +     +   
Sbjct: 295 PPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARR 354

Query: 436 LLHKMKEINVMPDASIVSIVVD 457
           LL K+   + +P A   + +++
Sbjct: 355 LLLKLFYDDSIPSAVTYNTLIE 376



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 185/342 (54%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M+     PNVVTY ++I G+C  K  +EA      M  +G++PN++TFN+I++ LC++G
Sbjct: 8   EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++ E S +L  M + G  PD  TYNTL++G+C  G  + A  L   M   G    V +Y+
Sbjct: 68  RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LIN  CK   +  A+  + +M  +G+ P+   + T+  G  +   ++ A+++ +EM R+
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRS 187

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G      TY   I+G C  G + EA+ L   +       D+ +Y+++I G  ++  L+ A
Sbjct: 188 GFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRA 247

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++   +    ++P+ VTYS +I GLC   ++ +A D+F +M    + P+  T+  LI  
Sbjct: 248 FQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINA 307

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           + +  + +K + L  +M +   +PDA   +++++ L K   S
Sbjct: 308 YCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARS 349



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 164/307 (53%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           R F EM   G  PNVVT+N ++D  CK  + DEA   L  M   G+ P+  T+N +++G 
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  GR+    E+ V M   G      +Y+ L+NGYCK      AL L++EM+  G+ P+V
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V + +L   + +   + RA + FD+M   G+  +  TY T I+G  + G + EA  + + 
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +        I  YN+LI+G C  GR+E A+ L + +    ++P+VV+YS +I G   + +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D+A  + ++M   +V+P+ +T+  LI+G       ++  ++  +M  I + PD    + 
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303

Query: 455 VVDLLAK 461
           +++   K
Sbjct: 304 LINAYCK 310



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%)

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            F  ME  GC   V +Y+ +I+GYCK K  + A      M  KG++P+++  N +  GL 
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              +++   ++  EM R G   D  TY T ++G CK G   +A+ L   +       ++ 
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y SLI+ +CK+G L  A+E F  +    L PN  TY+ +I G    G +D+A  +  +M
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             +  +P+++T++ LI G   +    + I LL  M    V+PD    S ++   A+N+
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 148/331 (44%), Gaps = 31/331 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +L  ++     PD V+++++I G      +  A  +  ++      PD  T
Sbjct: 206 LGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVT 265

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y++L+ GLC       A ++F+EM        +   P+  TYTT+I+  CKEG ++KA  
Sbjct: 266 YSSLIQGLCEQRRLTEACDMFQEM------LTIKLPPDEFTYTTLINAYCKEGDLNKALH 319

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE-- 178
           L  +M  K   P+ VTY  +I G        EA+RL +++      P+ VT+N +++   
Sbjct: 320 LHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCC 379

Query: 179 -------------LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
                         C  G MDEA ++ + MI    +P+   YN ++ G C  G V  A +
Sbjct: 380 NIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYK 439

Query: 226 LFVSMESMGCKHTVF-SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           L+  M      H  F  +++ +    K    EG     +E++   ++   +    L   L
Sbjct: 440 LYKEM-----VHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVL 494

Query: 285 FEIHQVE----RAFKLFDEMQRNGVAADTWT 311
            EI+Q E      F L  EM ++G+   T T
Sbjct: 495 VEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 231/435 (53%), Gaps = 14/435 (3%)

Query: 12  GRILKSCF----TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           GR+++  F     P+  TF  +I  LC E  + EA +LF++++  GC PDV T+ +L++G
Sbjct: 173 GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDG 232

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
             +         L EEM          C+ + VTY  +I+  CK G ++ A      MK 
Sbjct: 233 YGKCGELDEVEQLVEEMRRSG------CKADVVTYNALINCFCKFGRMETAYGYFAAMKR 286

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + +  NVVT+++ +  FC      EA +LF +M  +G+  N  T+  ++D  CK G++D+
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDD 346

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  LLD M++ GV  +  TY  L+DG C   +V  A+++   ME  G +     Y+ LI+
Sbjct: 347 AIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIH 406

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+  NK  E AL L SEM +KG++ D+ ++  L  GL  +H+++ A  L  +M  +G+  
Sbjct: 407 GHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLEIALE 365
           +   Y T +D   K+G + EA+ +    +IL   F  ++  Y +LIDGLCK+G ++ A+ 
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQ--KILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
            F  +    L PNV  Y+ ++ GLC +G +++A  LF +M    +  + + +  L+ G++
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYL 584

Query: 426 RINEPSKVIELLHKM 440
           +         L  KM
Sbjct: 585 KQGNLHDAFALKAKM 599



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 233/455 (51%), Gaps = 6/455 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++    +  R+ +    PD VTF SLI G      + E   L  ++R  GC+ DV TY
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTY 261

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N  C+      A   F  M       GV+   N VT++T +D  CKEG V +A +L
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMKRE----GVM--ANVVTFSTFVDAFCKEGLVREAMKL 315

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM+ + +  N  TYT +I G C A   ++A  L  EM+ QGV  NVVT+ V++D LCK
Sbjct: 316 FAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+ EA  +L +M + GVR +   Y TL+ G  +      A  L   M++ G +  +  
Sbjct: 376 ERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISL 435

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LI G C   +++ A SL ++M   G++P+ +I+ T+    F+  +V  A  +  ++ 
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKIL 495

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   +  TY   IDGLCK G I EA+  F+ +R L  + +++AY +L+DGLCK+G L 
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++LF  +    +  + V Y+ ++ G    G +  A  L   M ++ +  ++  +   I
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 615

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            GF  +N   +  E+  +M    + PD ++ + ++
Sbjct: 616 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 215/440 (48%), Gaps = 10/440 (2%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           A    +L+  L     + +A     ++R     P+  T   ++  L R     +   LFE
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           ++            PN  T+  +ID LCKEG + +A+ L  +MK+    P+VVT+ S+I 
Sbjct: 182 QLP----------APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+    + +E ++L  EM   G + +VVT+N +++  CK G+M+ A      M + GV  
Sbjct: 232 GYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           +  T++T +D FC  G V  A +LF  M   G     F+Y+ LI+G CK   ++ A+ L 
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM+ +G+  +VV +  L  GL +  +V  A  +   M++ GV A+   Y T I G   N
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
               +A+ L   ++    E DI  Y +LI GLC   +L+ A  L   +    L PN + Y
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + M+      G++ +A  +   + ++   PNVIT+  LI G  +     + I   +KM++
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 443 INVMPDASIVSIVVDLLAKN 462
           + + P+    + +VD L KN
Sbjct: 532 LGLDPNVQAYTALVDGLCKN 551



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%)

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           +N +ID LCK G L  A  LF  +     +P+VVT++ +I G    G++D+   L  +M 
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
            +    +V+T++ LI  F +             MK   VM +    S  VD   K  +  
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 467 NSLPSFT 473
            ++  F 
Sbjct: 311 EAMKLFA 317


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 230/461 (49%), Gaps = 10/461 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      +L  + +    PDAV + ++I  L A+  + EAA L  ++ + GC  DV T
Sbjct: 193 LGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNT 252

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  +V GLC   H   A  L + M          C P+ VTY  ++ GLC+    D+A  
Sbjct: 253 FNDVVLGLCGLGHVREAARLVDRMMMHG------CTPSVVTYGFLLRGLCRTRQADEAYA 306

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L ++ + N    VV   +VIRG         A  L+  M  +G  P+V T+N++M  LC
Sbjct: 307 MLGRVPEVN----VVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+   A R+LD M + G  P+  TY+TLL  FC  G  + A+ +   M + G      
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ +I    K+ +++ A+ L  EM S+G KPD+  +NT+   L    Q++ A  +F  +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV A+  TY T I  L  +G   E + L + + +  C  D+ +YN LI  LCK G +
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNV 542

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + ++ L   +    + PN  +Y+++I  LC  G++  A +L  +M    + P+++T++ L
Sbjct: 543 DRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 602

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I G  ++      + LL K+   NV PD    +I++    K
Sbjct: 603 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCK 643



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 225/464 (48%), Gaps = 10/464 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    +L  +L      D  TF  ++ GLC    + EAA L  ++ + GC P V TY
Sbjct: 229 GGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTY 288

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLCRT     A  +           G V E N V   T+I G   EG + +A EL
Sbjct: 289 GFLLRGLCRTRQADEAYAML----------GRVPEVNVVMLNTVIRGCLAEGKLARATEL 338

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  K   P+V TY  ++ G C       A R+  EM ++G  PN+VT++ ++   C+
Sbjct: 339 YEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCR 398

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG  D+A  +LD M   G   ++  YN ++      G+++ A  L   M+S GCK  + +
Sbjct: 399 NGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICT 458

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I   C N +++ A  ++  +L +G+  + + +NTL   L    + +   +L +EM 
Sbjct: 459 YNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMV 518

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   D  +Y   I  LCK G +  ++ L   +     + +  +YN LI+ LCK+G++ 
Sbjct: 519 LHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVR 578

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALEL + +    L P++VTY+ +I GLC  G    A +L   +    V P+++T+++LI
Sbjct: 579 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 638

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
               ++        LL K     ++P+     ++V    +  ++
Sbjct: 639 SWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQPVN 682



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 166/391 (42%), Gaps = 67/391 (17%)

Query: 117 KAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           +A  LL QM  +  + P+  +Y +V+     A    +A  L+  M+   V P   TF V 
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN----------------TLLD------- 212
              LC+ G+  +A  LL  M +HG  PDA  Y                 TLLD       
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 213 ------------GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE------ 254
                       G C  G V  A  L   M   GC  +V +Y  L+ G C+ ++      
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306

Query: 255 ----------------IEGALS---------LYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
                           I G L+         LY  M SKG  PDV  +N L  GL ++ +
Sbjct: 307 MLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGR 366

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
              A ++ DEM+  G A +  TY T +   C+NG   +A  +   +       + + YN 
Sbjct: 367 CGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNG 426

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +I  L K G+L+ A+ L + +      P++ TY+ +I  LCN+ QMD+A  +F ++ E  
Sbjct: 427 IIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEG 486

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           VV N IT++ LI   +      + + L ++M
Sbjct: 487 VVANGITYNTLIHALLHSGRWQEGLRLANEM 517


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 222/423 (52%), Gaps = 6/423 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P++V+++ LI GLC   R+ EA  L  ++   GC+P   TYT L+  LC       A N
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF+EM          C+PN  TYT +IDGLC++G +++A  +  +M    I P+V+TY +
Sbjct: 323 LFDEMIPRG------CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G+C       A  L   M  +  +PNV TFN +M+ LC+ GK  +A  LL  M+ +G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD  +YN L+DG C  G +N A +L  SM     +    +++ +IN +CK  + + A 
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +    ML KGI  D V   TL  G+ ++ +   A  + + + +  +     +    +D L
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K   + E + +   +  L     +  Y +L+DGL +SG +  +  +   +     +PNV
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             Y+I+I GLC  G++++A  L   M+++ V PN +T+ ++++G++   +  + +E +  
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676

Query: 440 MKE 442
           M E
Sbjct: 677 MVE 679



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 218/433 (50%), Gaps = 22/433 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   F +  ++ +    P   T+T LIK LC    I +A  LF ++   GC+P+V T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE--------PNTVTYTTIIDGLCKE 112
           YT L++GLCR            E ANG      VC         P+ +TY  +I+G CK+
Sbjct: 339 YTVLIDGLCRDGKI--------EEANG------VCRKMVKDRIFPSVITYNALINGYCKD 384

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G V  A ELL  M+ +  KPNV T+  ++ G C      +A  L   M+D G+ P++V++
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           NV++D LC+ G M+ A +LL  M    + PD  T+  +++ FC  G+ + A      M  
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G      + + LI+G CK  +   AL +   ++   I       N +   L +  +V+ 
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
              +  ++ + G+     TY T +DGL ++G I  +  +   +++  C  ++  Y  +I+
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GLC+ GR+E A +L  ++    + PN VTY++M+ G  N+G++D+A +    M E     
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684

Query: 413 NVITFDMLIRGFI 425
           N   +  L++GF+
Sbjct: 685 NDRIYSSLLQGFV 697



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 236/554 (42%), Gaps = 103/554 (18%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPDV 58
           G +   F +   ++     P+  T+T LI GLC + +I EA  +  K+   R+F   P V
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF---PSV 371

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            TY  L+NG C+    + A  L   M          C+PN  T+  +++GLC+ G   KA
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKR------ACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             LL +M D  + P++V+Y  +I G C     N A +L   M    ++P+ +TF  I++ 
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN----------------- 221
            CK GK D AS  L LM++ G+  D  T  TL+DG C  G+                   
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545

Query: 222 -HAKELFVSMESMGCK-----------------HTVFSYSILINGYCKNKEIEGALSLYS 263
            H+  + + M S GCK                  +V +Y+ L++G  ++ +I G+  +  
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            M   G  P+V  +  +  GL +  +VE A KL   MQ +GV+ +  TY   + G   NG
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDG------------------------------ 353
            +  A+E    +     E + R Y+SL+ G                              
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECIN 725

Query: 354 -----------------------LCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGL 389
                                  LCK GR + + +L ++ L  GV +   +   I++   
Sbjct: 726 ELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM--DIIMESY 783

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C+  +  K  +L   + ++  VP+  +F ++I+G  +  +  +  EL+ ++   N + + 
Sbjct: 784 CSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEK 843

Query: 450 SIVSIVVDLLAKNE 463
           S V   V+ L + +
Sbjct: 844 SGVLTYVECLMEGD 857



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 184/392 (46%), Gaps = 41/392 (10%)

Query: 36  ESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
           E  +++    F +LR VFG   +   Y++L+  L +     +A   +  M       G++
Sbjct: 137 EKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMI 196

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
                  Y TI++ LCK G+ + A+  + ++       +    TS++ GFC   +  +A 
Sbjct: 197 ------DYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDAL 250

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           ++F ++M + V                                    P++ +Y+ L+ G 
Sbjct: 251 KVF-DVMSKEVT---------------------------------CAPNSVSYSILIHGL 276

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  GR+  A  L   M   GC+ +  +Y++LI   C    I+ A +L+ EM+ +G KP+V
Sbjct: 277 CEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV 336

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +  L  GL    ++E A  +  +M ++ +     TY   I+G CK+G +V A EL   
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV 396

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C+ ++R +N L++GLC+ G+   A+ L + +    L P++V+Y+++I GLC +G 
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           M+ A  L   M    + P+ +TF  +I  F +
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 177/460 (38%), Gaps = 122/460 (26%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      +L R+L +  +PD V++  LI GLC E  +  A  L + +  F  EPD  T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478

Query: 61  YT-----------------------------------TLVNGLCRTSHTIVALNLFE--- 82
           +T                                   TL++G+C+   T  AL + E   
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538

Query: 83  ----------------------------EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
                                        M     + G+V  P+ VTYTT++DGL + G 
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLV--PSVVTYTTLVDGLIRSGD 596

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +  +  +L  MK     PNV  YT +I G C      EA++L   M D GV PN VT+ V
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR-VNHAKELFVS---- 229
           ++     NGK+D A   +  M++ G   +   Y++LL GF L+ + +++++E  VS    
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIAL 716

Query: 230 --------------MESMG--------------CK----------------HTVF---SY 242
                         +E +G              CK                  VF   + 
Sbjct: 717 RETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM 776

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE-MQ 301
            I++  YC  K+    + L + +L  G  P       +  GL +    ERA +L  E + 
Sbjct: 777 DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLT 836

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            NGV   +    T+++ L +     +  E+   +  L C 
Sbjct: 837 SNGVVEKSGVL-TYVECLMEGDETGDCSEVIDLVDQLHCR 875



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G + +   +++L + L ++     A+  +  M+ +G       YRT ++ LCKNGY  EA
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGY-TEA 213

Query: 329 VELFHTLRILKCEFDIRAY--NSLIDGLCKSGRLEIALELFRSLPCGV-LVPNVVTYSIM 385
            E+F + +ILK  F + ++   SL+ G C+   L  AL++F  +   V   PN V+YSI+
Sbjct: 214 AEMFMS-KILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I GLC  G++++A  L   M E    P+  T+ +LI+         K   L  +M     
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332

Query: 446 MPDASIVSIVVDLLAKN 462
            P+    ++++D L ++
Sbjct: 333 KPNVHTYTVLIDGLCRD 349


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 213/402 (52%), Gaps = 6/402 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +F  +IKG C    + ++  L   L+  G  P+V  YTTL++G C+      A   F
Sbjct: 161 DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFF 220

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           ++M    GE G+V   N  T+T +I+GL K+G      +L  +MK   + PN+ TY  ++
Sbjct: 221 DKM----GEMGLVA--NQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLM 274

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
             +C       A  LF EM ++GV+ NVVT+N ++  +C+  ++ EA +L+D M +  V 
Sbjct: 275 NEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVS 334

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TYNTL+ GFC  G ++ A  L   ++S G   ++ +Y+ILI GY K    +G   L
Sbjct: 335 PNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADL 394

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM  +GI P  V    L      + ++E+AF+++  M++ G+  D + Y   I GLC 
Sbjct: 395 AREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCM 454

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + E+ +LF ++  +  E     YN++I G CK      AL L R +    LVPNV +
Sbjct: 455 KGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVAS 514

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           YS +IG LC DG+ ++A  L   M E  + P+    +M+ + 
Sbjct: 515 YSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 184/362 (50%), Gaps = 6/362 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +LG +     +P+ V +T+LI G C    I  A   F K+   G   + +T+
Sbjct: 176 GNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTF 235

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+NGL +        +LFE+M   NG F     PN  TY  +++  C EG + +A +L
Sbjct: 236 TVLINGLFKKGLKKDGFDLFEKMKI-NGLF-----PNLYTYNCLMNEYCGEGKICRAFDL 289

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+++ ++ NVVTY ++I G C  +   EA++L  +M    V PN++T+N ++   C 
Sbjct: 290 FDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCD 349

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D+AS LLD +  +G+ P   TYN L++G+   G      +L   ME  G   +  +
Sbjct: 350 VGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVT 409

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            ++LI+ Y + +E+E A  +YS M   G+ PDV ++  L  GL     ++ + KLF  M 
Sbjct: 410 CTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMG 469

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              V      Y T I G CK      A+ L   +       ++ +Y+S+I  LCK G+ E
Sbjct: 470 EMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWE 529

Query: 362 IA 363
            A
Sbjct: 530 EA 531



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 220/442 (49%), Gaps = 11/442 (2%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGC--EPDVFTYTTLVNGLCRTSHTIVALNL 80
           A+ + S+I        + +A   F ++   G    P++F   +L+  L R+       N 
Sbjct: 93  ALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFN--SLLGSLVRS-------NC 143

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE+      E     + +  ++  +I G C+ G +DK+ +LL  ++D  + PNVV YT++
Sbjct: 144 FEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTL 203

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C   D   A+  F +M + G+  N  TF V+++ L K G   +   L + M  +G+
Sbjct: 204 IDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGL 263

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+ +TYN L++ +C  G++  A +LF  M   G +  V +Y+ LI G C+ + +  A  
Sbjct: 264 FPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEK 323

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +M    + P+++ +NTL  G  ++  +++A  L D+++ NG++    TY   I+G  
Sbjct: 324 LVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYS 383

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G      +L   +              LID   +   +E A +++ S+    LVP+V 
Sbjct: 384 KAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVY 443

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y ++I GLC  G M ++  LF  M E  V P+ + ++ +I G+ + +   + + LL +M
Sbjct: 444 VYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREM 503

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
           +   ++P+ +  S ++ +L K+
Sbjct: 504 EAKGLVPNVASYSSIIGVLCKD 525



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 138/279 (49%), Gaps = 6/279 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F +   + +     + VT+ +LI G+C E R+ EA  L  +++     P++ TY
Sbjct: 281 GKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITY 340

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ G C   +   A +L +++ + NG       P+ VTY  +I+G  K G      +L
Sbjct: 341 NTLIGGFCDVGNLDKASSLLDQLKS-NG-----LSPSLVTYNILIEGYSKAGNWKGVADL 394

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ + I P+ VT T +I  +   ++  +A +++  M   G+ P+V  + V++  LC 
Sbjct: 395 AREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCM 454

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G M E+S+L   M +  V P    YNT++ G+C       A  L   ME+ G    V S
Sbjct: 455 KGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVAS 514

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           YS +I   CK+ + E A  L  +M+   +KP   I N +
Sbjct: 515 YSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 6/210 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +L ++  +  +P  VT+  LI+G          A L  ++   G  P   T
Sbjct: 350 VGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVT 409

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T L++   R      A  ++  M     +FG+V  P+   Y  +I GLC +G + ++ +
Sbjct: 410 CTVLIDAYVRLQEMEKAFQIYSSME----KFGLV--PDVYVYGVLIHGLCMKGNMKESSK 463

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M + +++P+ V Y ++I G+C   +   A RL  EM  +G+ PNV +++ I+  LC
Sbjct: 464 LFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLC 523

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           K+GK +EA  LLD MI+  ++P A   N +
Sbjct: 524 KDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 15/240 (6%)

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  LF S    G +HT  S S L+     + ++  A SL  ++LS  I        +L 
Sbjct: 20  QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSL- 78

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
                +H + +         +N        Y + I+   K+  + +A+  F+ +      
Sbjct: 79  -----LHHLTQ--------NQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLV 125

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           F    +NSL+  L +S   E A   F  L   V   +V ++ IMI G C +G +DK+  L
Sbjct: 126 FRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQL 184

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              +++  + PNV+ +  LI G  +  +  +      KM E+ ++ +    +++++ L K
Sbjct: 185 LGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFK 244


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/367 (35%), Positives = 198/367 (53%), Gaps = 5/367 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  DA+ FT L+KGLCA+ R  +A  +   ++   GC P+VF+
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC  + +  AL L + M +  G+    C P+ V+YTT+I+G  KEG +DKA  
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I PNVVTY+S+I   C A+  ++A  +   M+  GV PN  T+N I+   C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G+  EA   L  M   GV PD  TYN+L+D  C  GR   A+++F SM   G K  + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  L+ GY     +     L   M+  GI P+  + + L     +  +V++A  +F +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           ++ G+  DT TY T I  LCK+G + +A+  F  +   +       YNSLI  LC   + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 361 EIALELF 367
           + A + F
Sbjct: 461 DKAKDYF 467



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 194/386 (50%), Gaps = 7/386 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP+  T+  LI   C   R+    A    +   G   D   +T L+ GLC    T  A++
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVTY 137
           +        G     C PN  +Y  ++ GLC E    +A ELL  M D   +  P+VV+Y
Sbjct: 148 IVLRRMTQLG-----CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSY 202

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           T+VI GF    D ++A   + EM+D+G+ PNVVT++ I+  LCK   MD+A  +L  M++
Sbjct: 203 TTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +GV P+  TYN+++ G+C +G+   A      M S G +  V +Y+ L++  CKN     
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  ++  M  +G+KP++  + TL  G      +     L D M RNG+  + + +   I 
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
              K G + +A+ +F  +R      D   Y ++I  LCKSGR+E A+  F  +    L P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFL 403
             + Y+ +I  LC   + DKA+D FL
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKDYFL 468



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 165/336 (49%), Gaps = 3/336 (0%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + PN+ TY  +I   C A   +        ++ +G + + + F  ++  LC + +  +A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 190 RL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYSILI 246
            + L  M Q G  P+ F+YN LL G C   R   A EL   M   G  C   V SY+ +I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           NG+ K  +++ A   Y EML +GI P+VV ++++   L +   +++A ++   M +NGV 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY + + G C +G   EA+     +     E D+  YNSL+D LCK+GR   A ++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F S+    L P + TY  ++ G    G + +   L   M  N + PN   F +LI  + +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             +  + + +  KM++  + PD      V+ +L K+
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 167/345 (48%), Gaps = 3/345 (0%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQ-MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           + + +T ++ GLC +     A +++L+ M      PNV +Y  +++G C      EA  L
Sbjct: 125 DAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL 184

Query: 157 FIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
              M D G    P+VV++  +++   K G +D+A      M+  G+ P+  TY++++   
Sbjct: 185 LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C    ++ A E+  SM   G      +Y+ +++GYC + + + A+    +M S G++PDV
Sbjct: 245 CKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDV 304

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +N+L   L +  +   A K+FD M + G+  +  TY T + G    G +VE   L   
Sbjct: 305 VTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +       +   ++ LI    K G+++ A+ +F  +    L P+ VTY  +IG LC  G+
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           ++ A   F  M +  + P  I ++ LI      ++  K  +   K
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFLK 469



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 6/219 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL  ++K+   P+  T+ S++ G C+  +  EA     K+   G EPDV TY +L++ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  +F+ M           +P   TY T++ G   +G + +   LL  M    
Sbjct: 316 KNGRCTEARKMFDSMTKRG------LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I PN   ++ +I  +      ++A  +F +M  QG+ P+ VT+  ++  LCK+G++++A 
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           R  + MI   + P    YN+L+   C+  + + AK+ F+
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFL 468


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 238/465 (51%), Gaps = 39/465 (8%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+T LIKGLC E RI +A  L  ++ + G  P V+TY  +++G C++     AL + + +
Sbjct: 286 TYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KAL 344

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
              NG     C P+  TY ++I GLC  G +D+A+ELL     +   P V+T+T++I G+
Sbjct: 345 MEQNG-----CNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGY 398

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A+  ++A R+   M+    + ++  + V+++ L K  ++ EA   L+ M  +G+ P+ 
Sbjct: 399 CKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNV 458

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY +++DG+C  G V  A E+F  ME  GC    ++Y  LI G  ++K++  A++L ++
Sbjct: 459 VTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITK 518

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M   GI P V+ + TL  G  + H+ + AF+LF+ M++NG+  D   Y    D LCK+G 
Sbjct: 519 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 578

Query: 325 IVEAVEL---------------------------FHTLRILK-----CEFDIRAYNSLID 352
             EA                              F  + I K     C+ D+  Y+ L+ 
Sbjct: 579 AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQ 638

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            LCK  +L  AL +   +    +  N+V Y+I+I  +  +G+ D A+ LF +M  +   P
Sbjct: 639 ALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +  T+ + I  + +I    +   L+ +M+   V PD    +I ++
Sbjct: 699 SATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN 743



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/417 (32%), Positives = 215/417 (51%), Gaps = 7/417 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ ++I   C +  +  A   F  LR  G + D +T   L+ G CRTS    A  L
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M        + C  N  +YT +I GLC+   V +A  L+  M       N+ TYT +
Sbjct: 237 LMMMPL------MGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLL 290

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I+G C     ++A+ L  EM  +GV P+V T+N ++D  CK+G+M +A  +  LM Q+G 
Sbjct: 291 IKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGC 350

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD +TYN+L+ G C  G+++ A+EL     + G   TV +++ LINGYCK + I+ AL 
Sbjct: 351 NPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALR 409

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + S M+S   K D+  +  L   L +  +++ A +  +EM  NG+A +  TY + IDG C
Sbjct: 410 VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYC 469

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G +  A+E+F  +    C  +   Y SLI GL +  +L  A+ L   +    + P V+
Sbjct: 470 KVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVI 529

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           TY+ +I G C   + D A  LF  ME+N + P+   +++L     +     +    L
Sbjct: 530 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL 586



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 211/430 (49%), Gaps = 15/430 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L   +   FTP  +TFT+LI G C   RI +A  + + +    C+ D+  Y
Sbjct: 367 GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAY 426

Query: 62  TTLVNGL---CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
             L+N L   CR       LN  E  ANG         PN VTYT+IIDG CK G V  A
Sbjct: 427 GVLINVLIKKCRLKEAKETLN--EMFANG-------LAPNVVTYTSIIDGYCKVGMVGAA 477

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            E+   M+ +   PN  TY S+I G    K  ++A  L  +M + G+ P V+T+  ++  
Sbjct: 478 LEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQG 537

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            CK  + D A RL ++M Q+G+ PD   YN L D  C +GR   A+E +  +   G   T
Sbjct: 538 QCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKGVVLT 594

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
             +Y+ L++G+ K    + A  L  +M+++G K D+  ++ L   L +  ++  A  + D
Sbjct: 595 KVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILD 654

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M  +GV  +   Y   I  + K G    A  LF+ +     +     Y   I   CK G
Sbjct: 655 QMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIG 714

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R+E A  L   +    + P+VVTY+I I G  + G +D+A      M + +  PN  T+ 
Sbjct: 715 RIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYW 774

Query: 419 MLIRGFIRIN 428
           +L++ F++++
Sbjct: 775 LLLKHFLKMS 784



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 206/420 (49%), Gaps = 25/420 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T+ SLI GL  + ++ +A AL TK++  G  P V TYTTL+ G C+      A  L
Sbjct: 491 PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRL 550

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE M   NG       P+   Y  + D LCK G  ++A   L++   K +    VTYTS+
Sbjct: 551 FEMMEQ-NG-----LTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSL 601

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GF  A + + A  L  +M+++G + ++ T++V++  LCK  K++EA  +LD M   GV
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + +   Y  ++      G+ +HAK LF  M S G K +  +Y++ I+ YCK   IE A  
Sbjct: 662 KCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEH 721

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM   G+ PDVV +N    G   +  ++RAF     M       + WTY   +    
Sbjct: 722 LIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFL 781

Query: 321 K----NGYIVEAVELFHTL----------RILKCEFD--IRAYNSLIDGLCKSGRLEIAL 364
           K    N + V+   +++ +          R++K   +  +  Y+S+I G CK+ RLE A 
Sbjct: 782 KMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEAC 841

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            L   +    + PN   Y+++I   C+     KA     DM E    P + ++  LI G 
Sbjct: 842 VLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGL 901



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 189/381 (49%), Gaps = 1/381 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TVTY T+I   CK+G +  A      +++  ++ +  T  +++ G+C   D  +A  L
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            + M   G + N  ++ +++  LC+   + EA  L+ +M+  G   +  TY  L+ G C 
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCK 296

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR++ A+ L   M   G   +V++Y+ +I+GYCK+  ++ AL + + M   G  PD   
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L  GL    +++ A +L +     G      T+   I+G CK   I +A+ +   + 
Sbjct: 357 YNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C+ D++AY  LI+ L K  RL+ A E    +    L PNVVTY+ +I G C  G + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVG 475

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A ++F  ME     PN  T+  LI G I+  +  K + L+ KM+E  + P     + ++
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLI 535

Query: 457 DLLAKNEISLNSLPSFTVHEQ 477
               K     N+   F + EQ
Sbjct: 536 QGQCKKHEFDNAFRLFEMMEQ 556



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 155/330 (46%), Gaps = 36/330 (10%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +L+  ++ +G+ P+ VT+N ++   CK G +  A R   L+ + G++ D +T N LL G+
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C T  +  A  L + M  MGC+   +SY+ILI G C+ + +  AL L   M+  G   ++
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL 284

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +  L  GL +  ++  A  L DEM   GV    WTY   IDG CK+G + +A+ +   
Sbjct: 285 HTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C  D   YNSLI GLC  G+L+ A EL          P V+T++ +I G C   +
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 395 MD-----------------------------------KARDLFLDMEENAVVPNVITFDM 419
           +D                                   +A++   +M  N + PNV+T+  
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTS 463

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           +I G+ ++      +E+   M+     P+A
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNA 493



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 160/363 (44%), Gaps = 22/363 (6%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+TSL+ G         AA L  K+   GC+ D++TY+ L+  LC+      AL++ ++
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M       GV C  N V YT II  + KEG  D AK L  +M     KP+  TYT  I  
Sbjct: 656 MTVS----GVKC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISS 709

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           +C      EA+ L  EM   GV P+VVT+N+ ++     G +D A   L  M+     P+
Sbjct: 710 YCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPN 769

Query: 204 AFTYNTLLDGFCLTGRVNH----------------AKELFVSMESMGCKHTVFSYSILIN 247
            +TY  LL  F     +N                   +L   M   G   TV +YS +I 
Sbjct: 770 CWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIA 829

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+CK   +E A  L   ML K I P+  I+  L     +I    +A     +M   G   
Sbjct: 830 GFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQP 889

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
              +Y   I GLC  G    A  LF  L  +    +  A+  L DGL K+G ++   +L 
Sbjct: 890 QLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949

Query: 368 RSL 370
            ++
Sbjct: 950 AAM 952



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 22/288 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+  H   +   ++ S   P A T+T  I   C   RI EA  L  ++   G  PDV TY
Sbjct: 679 GKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTY 738

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIID-----GLCKEGFVD 116
              +NG     +   A +  + M + +      CEPN  TY  ++       L    +VD
Sbjct: 739 NIFINGCGHMGYIDRAFSTLKRMVDAS------CEPNCWTYWLLLKHFLKMSLINAHYVD 792

Query: 117 KAK-----------ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
            +            +LL +M    + P VVTY+S+I GFC A    EA  L   M+ + +
Sbjct: 793 TSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDI 852

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN   + +++   C      +A   +  MI+ G +P   +Y+ L+ G C  G  + AK 
Sbjct: 853 SPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKS 912

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           LF  +  M   H   ++ IL +G  K   ++    L + M ++  + D
Sbjct: 913 LFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRID 960



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 141/333 (42%), Gaps = 22/333 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +++    +L ++  S    + V +T +I  +  E +   A +LF ++   G +P   TYT
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYT 704

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
             ++  C+      A +L  EM       GV   P+ VTY   I+G    G++D+A   L
Sbjct: 705 VFISSYCKIGRIEEAEHLIGEMERD----GVT--PDVVTYNIFINGCGHMGYIDRAFSTL 758

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAK-------------DW---NEAKRLFIEMMDQGVQ 166
            +M D + +PN  TY  +++ F                 +W   N   +L   MM  G+ 
Sbjct: 759 KRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLN 818

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P VVT++ I+   CK  +++EA  LLD M+   + P+   Y  L+   C       A   
Sbjct: 819 PTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSF 878

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              M   G +  + SY  LI G C   + + A SL+ ++L      + V    L  GL +
Sbjct: 879 VTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLK 938

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
              V+   +L   M       D+ +Y    D +
Sbjct: 939 AGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 120/259 (46%), Gaps = 14/259 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     ++G + +   TPD VT+   I G      I  A +   ++    CEP+ +T
Sbjct: 713 IGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWT 772

Query: 61  YTTLVNGLCRTS----HTI--------VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG 108
           Y  L+    + S    H +        + LN+  ++     + G+   P  VTY++II G
Sbjct: 773 YWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGL--NPTVVTYSSIIAG 830

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            CK   +++A  LL  M  K+I PN   YT +I+  C  K + +A     +M++ G QP 
Sbjct: 831 FCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQ 890

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           + +++ ++  LC  G  D A  L   ++      +   +  L DG    G V+   +L  
Sbjct: 891 LESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLA 950

Query: 229 SMESMGCKHTVFSYSILIN 247
           +M++  C+    SYS+L +
Sbjct: 951 AMDNRHCRIDSESYSMLTD 969



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 85/201 (42%)

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N     L      E   KL+  + + G+  DT TY T I   CK G +  A   F  LR
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + D    N+L+ G C++  L  A  L   +P      N  +Y+I+I GLC    + 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A  L   M  +    N+ T+ +LI+G  +         LL +M    V+P     + ++
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 457 DLLAKNEISLNSLPSFTVHEQ 477
           D   K+    ++L    + EQ
Sbjct: 327 DGYCKSGRMKDALGIKALMEQ 347



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 3/119 (2%)

Query: 325 IVEAVELFHTLRIL---KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           + EAV+    +R +   +     + YN  +  L +    E   +L+  L    L+P+ VT
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVT 181

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           Y+ MI   C  G +  A   F  + E+ +  +  T + L+ G+ R ++  K   LL  M
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMM 240


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++  +C +  + EA  L   L  FGCEPDV +Y  ++ GLC          L EEM    
Sbjct: 198 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR-- 255

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
               + C PN VT+ T+I  LC+ G  ++  E+L QM +    P++  Y ++I G C   
Sbjct: 256 ----MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEG 311

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
               A  +   M   G++PNVV +N ++  LC   + +E   LL  M       D  T+N
Sbjct: 312 HLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 371

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+D FC  G V+   EL   M   GC   V +Y+ +ING+CK   I+ A+ L   M + 
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G KP+ + +  +  GL    +   A  L  +M + G   +  T+ T I+ LCK G + +A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           +EL   + +  C  D+ +Y+++IDGL K+G+ + ALEL   +    + PN + YS +   
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           L  +G+++K   +F ++++  +  + + ++ +I    +  E  + IE L  M     +P+
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611

Query: 449 ASIVSIVVDLLAK 461
            S  +I++  LA 
Sbjct: 612 ESTYTILIRGLAS 624



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 218/442 (49%), Gaps = 8/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T+  +++ LCA  RI +A A+  ++   GC P    Y  ++   CR      A+ +
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            E++ A G       C  +      +++ +C +G VD+A  LL  +     +P+VV+Y +
Sbjct: 180 LEDLHARG-------CALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNA 232

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C AK W   + L  EM+     PN+VTFN ++  LC+NG  +    +L  M++HG
Sbjct: 233 VLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHG 292

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   Y T++DG C  G +  A E+   M S G K  V  Y+ L+ G C  +  E   
Sbjct: 293 CTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETE 352

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L +EM  K    D V  N L     +   V+R  +L ++M   G   D  TY T I+G 
Sbjct: 353 ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGF 412

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I EAV L  ++    C+ +  +Y  ++ GLC + R   A +L   +       N 
Sbjct: 413 CKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP 472

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +T++ +I  LC  G +++A +L   M  N   P++I++  +I G  +  +  + +ELL+ 
Sbjct: 473 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 532

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M    + P+  I S +   L++
Sbjct: 533 MVNKGMSPNTIIYSSIASALSR 554



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 201/385 (52%), Gaps = 6/385 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTF +LI  LC          +  ++   GC PD+  Y T+++G+C+  H  VA  +
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 319

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M +    +G+  +PN V Y T++ GLC     ++ +ELL +M DK+   + VT+  +
Sbjct: 320 LNRMPS----YGL--KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  FC     +    L  +M+++G  P+V+T+  +++  CK G +DEA  LL  M   G 
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P+  +Y  +L G C   R   A++L   M   GC     +++ LIN  CK   +E A+ 
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 493

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +ML  G  PD++ ++T+  GL +  + + A +L + M   G++ +T  Y +    L 
Sbjct: 494 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 553

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G I + +++F  ++      D   YN++I  LCK G  E A+E    +     VPN  
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDM 405
           TY+I+I GL ++G + +A+++  ++
Sbjct: 614 TYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 202/474 (42%), Gaps = 47/474 (9%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           +V  +SLI+ LCA  R  EAA   +          V  Y  +V G CR      A  L  
Sbjct: 58  SVRLSSLIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLAA 114

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
                     V   PN  TY  ++  LC  G +  A  +L +M  +   P    Y  ++ 
Sbjct: 115 ---------AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILE 165

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
             C    +  A R+  ++  +G   +V   N++++ +C  G +DEA  LL  +   G  P
Sbjct: 166 AACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEP 225

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK----------------------HTVF 240
           D  +YN +L G C+  R    +EL   M  M C                       H V 
Sbjct: 226 DVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVL 285

Query: 241 S-------------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
           +             Y+ +I+G CK   +E A  + + M S G+KP+VV +NTL  GL   
Sbjct: 286 AQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSA 345

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            + E   +L  EM       D  T+   +D  C+NG +   +EL   +    C  D+  Y
Sbjct: 346 ERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITY 405

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            ++I+G CK G ++ A+ L +S+      PN ++Y+I++ GLC+  +   A DL   M +
Sbjct: 406 TTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 465

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                N ITF+ LI    +     + IELL +M      PD    S V+D L K
Sbjct: 466 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 519



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 168/362 (46%), Gaps = 3/362 (0%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  ++ G C+ G ++ A+ L   +    + PN  TY  V+R  C      +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G  P    ++VI++  C+ G    A R+L+ +   G   D    N +L+  C  G V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  L   + S GC+  V SY+ ++ G C  K       L  EM+     P++V  NTL 
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L      ER  ++  +M  +G   D   Y T IDG+CK G++  A E+ + +     +
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  YN+L+ GLC + R E   EL   +       + VT++I++   C +G +D+  +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              M E   +P+VIT+  +I GF +     + + LL  M      P+    +IV+  L  
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 462 NE 463
            E
Sbjct: 450 AE 451



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 144/285 (50%), Gaps = 8/285 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VTF  L+   C    +     L  ++   GC PDV TYTT++NG C+      A+ L 
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLL 425

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCK-EGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + M          C+PNT++YT ++ GLC  E +VD A++L+ QM  +    N +T+ ++
Sbjct: 426 KSMT------ACGCKPNTISYTIVLKGLCSAERWVD-AEDLMSQMIQQGCPLNPITFNTL 478

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      +A  L  +M+  G  P++++++ ++D L K GK DEA  LL++M+  G+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+   Y+++       GR+N   ++F +++    +     Y+ +I+  CK  E E A+ 
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
             + M+S G  P+   +  L  GL     V+ A ++  E+   G 
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGA 643


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 222/424 (52%), Gaps = 6/424 (1%)

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           E + +T   +V+  C+T     A  +  EM            P+ VT+  +ID   + G 
Sbjct: 154 EVNAYTLNIMVHSYCKTLEFDGADTVISEMEK------RCVFPDVVTHNVLIDARFRAGD 207

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           VD A  L+  M ++ +KP +VTY SV++G C  + +++AK +F  M    V P+V +FN+
Sbjct: 208 VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++   C+ G++ EA +    M    V PD  +++ L+  F   G ++HA      M+ +G
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                  Y+++I G+C+   +  AL +  EM+  G  PDVV +NTL  GL + H++  A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           KL +EM+  GV  D  T+ T I G C+ G    A++LF TL   +   D+  YNSLIDG+
Sbjct: 388 KLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGM 447

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C+ G L  A EL+  +    ++PN +TYSI+I   C  GQ++ A     +M +   +PN+
Sbjct: 448 CRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNI 507

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
            T++ +I+G+ R     K  + L KM++ NV PD    + ++    K E    +   F +
Sbjct: 508 RTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNI 567

Query: 475 HEQQ 478
            E++
Sbjct: 568 MEKE 571



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 223/447 (49%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     ++  +      P  VT+ S++KGLC   R  +A  +F  +      PDV ++
Sbjct: 206 GDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSF 265

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G CR      A+  ++EM +          P+ V+++ +I    + G +D A   
Sbjct: 266 NILIGGFCRVGEVKEAVKFYKEMQH------RYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK   + P+ V YT VI GFC A   +EA R+  EM+  G  P+VVT+N +++ LCK
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK 379

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ +A +LL+ M + GV PD  T+ TL+ G+C  G   +A +LF ++     +  V +
Sbjct: 380 QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVT 439

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G C+  ++  A  L+ +M ++ I P+ + ++ L     E  QVE AF   DEM 
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMV 499

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G   +  TY + I G C++G + +  +    +R      D+  +N+LI G  K   + 
Sbjct: 500 KKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMH 559

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +F  +   ++ P+ VTY+++I G    G M  A  +F  M ++ + P+  T+  LI
Sbjct: 560 GAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLI 619

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G +      +  +L  +M      PD
Sbjct: 620 NGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 218/444 (49%), Gaps = 6/444 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L S    +A T   ++   C       A  + +++      PDV T+  L++   R   
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A+ L + MAN         +P  VTY +++ GLCK    DKAKE+   M   ++ P+
Sbjct: 208 VDAAIALVDSMANRG------LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPD 261

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V ++  +I GFC   +  EA + + EM  + V P+VV+F+ ++    + G+MD A   L 
Sbjct: 262 VRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR 321

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G+ PD   Y  ++ GFC  G ++ A  +   M   GC   V +Y+ L+NG CK  
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQH 381

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            +  A  L +EM  +G+ PD+    TL  G       E A +LFD + R  +  D  TY 
Sbjct: 382 RLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYN 441

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + IDG+C+ G + +A EL+  +   +   +   Y+ LID  C+ G++E A      +   
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKK 501

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
             +PN+ TY+ +I G C  G + K +     M ++ V P++ITF+ LI G+I+       
Sbjct: 502 GNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGA 561

Query: 434 IELLHKMKEINVMPDASIVSIVVD 457
             + + M++  V PDA   +++++
Sbjct: 562 FNVFNIMEKEMVRPDAVTYNMIIN 585



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 230/469 (49%), Gaps = 9/469 (1%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
            V+  + K C  PD VT   LI        +  A AL   +   G +P + TY +++ GL
Sbjct: 178 TVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGL 237

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C+      A  +F  M            P+  ++  +I G C+ G V +A +   +M+ +
Sbjct: 238 CKHRRFDKAKEVFRTMDQ------CSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHR 291

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            + P+VV+++ +I  F    + + A     EM   G+ P+ V + +++   C+ G M EA
Sbjct: 292 YVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA 351

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            R+ D M+  G  PD  TYNTLL+G C   R+  A++L   ME  G    + +++ LI+G
Sbjct: 352 LRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHG 411

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           YC+    E AL L+  +L + ++PDVV +N+L  G+     + +A +L+D+M    +  +
Sbjct: 412 YCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPN 471

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY   ID  C+ G + +A      +       +IR YNS+I G C+SG ++   +  +
Sbjct: 472 HITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQ 531

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    + P+++T++ +I G   +  M  A ++F  ME+  V P+ +T++M+I GF    
Sbjct: 532 KMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQG 591

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
                  +   M +  + PD       + L+  +  + NS  +F +H++
Sbjct: 592 NMQDAGRVFKGMGDSGIEPDR---YTYMSLINGHVTAGNSKQAFQLHDE 637



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 182/350 (52%), Gaps = 2/350 (0%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           L + G+   A+E    +   + + N  T   ++  +C   +++ A  +  EM  + V P+
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           VVT NV++D   + G +D A  L+D M   G++P   TYN++L G C   R + AKE+F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
           +M+       V S++ILI G+C+  E++ A+  Y EM  + + PDVV  + L +GLF   
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCL-IGLFSRR 310

Query: 289 -QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            +++ A     EM+  G+  D   Y   I G C+ G + EA+ +   +    C  D+  Y
Sbjct: 311 GEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTY 370

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+L++GLCK  RL  A +L   +    + P++ T++ +I G C  G  + A  LF  +  
Sbjct: 371 NTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLR 430

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             + P+V+T++ LI G  R  + +K  EL   M    ++P+    SI++D
Sbjct: 431 QRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILID 480



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 153/303 (50%), Gaps = 2/303 (0%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           QP V  F++++    ++ K  EA     L++ H V   A   N LL      G  + A+E
Sbjct: 86  QPQV--FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            +  + S   +   ++ +I+++ YCK  E +GA ++ SEM  + + PDVV HN L    F
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARF 203

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
               V+ A  L D M   G+     TY + + GLCK+    +A E+F T+       D+R
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           ++N LI G C+ G ++ A++ ++ +    + P+VV++S +IG     G+MD A     +M
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM 323

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           +   +VP+ + + M+I GF R    S+ + +  +M     +PD    + +++ L K    
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRL 383

Query: 466 LNS 468
           L++
Sbjct: 384 LDA 386



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 163/330 (49%)

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           +E++  +   +  P    +  +IR +  ++   EA   F  ++D  V       N ++  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L + G    A     L++      +A+T N ++  +C T   + A  +   ME       
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V ++++LI+   +  +++ A++L   M ++G+KP +V +N++  GL +  + ++A ++F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M +  VA D  ++   I G C+ G + EAV+ +  ++      D+ +++ LI    + G
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRG 311

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            ++ A    R +    LVP+ V Y+++IGG C  G M +A  +  +M     +P+V+T++
Sbjct: 312 EMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYN 371

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            L+ G  + +      +LL++M+E  V PD
Sbjct: 372 TLLNGLCKQHRLLDAEKLLNEMEERGVTPD 401



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/236 (20%), Positives = 98/236 (41%), Gaps = 39/236 (16%)

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           S +L+    P   + + L     +  +   AF+ F  +  + V          +  L + 
Sbjct: 76  SSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRA 135

Query: 323 GYIVEAVELFHTLRILKCEFDIRAY--NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           G+   A E +    +L  + ++ AY  N ++   CK+   + A  +   +    + P+VV
Sbjct: 136 GWPHLAQEAYRL--VLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193

Query: 381 TYSIMIG-----------------------------------GLCNDGQMDKARDLFLDM 405
           T++++I                                    GLC   + DKA+++F  M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++ +V P+V +F++LI GF R+ E  + ++   +M+   V PD    S ++ L ++
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSR 309


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 232/446 (52%), Gaps = 15/446 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  TF+ LI GLC   R+ EA   + ++    C P++     L+  LC+      A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTYTS 139
           F          G+ C P+ +T   +I+G C+   +DKA EL  +M K+  + P   TYT+
Sbjct: 61  FR---------GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQH 198
           +I+ +C     ++A++L  E        +V+    +    CK  ++DEA +LL D++ + 
Sbjct: 112 IIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
             +PD   +N ++ GFC  GRV  A E+  ++ SMGC     +Y+ LI+G+CK+  +  A
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229

Query: 259 LSLYSEMLSKG--IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
           L L+  + S+    +P+VV  N L  GL +  ++E AF+L  +M+   + ADT+TY T +
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           DGLCK G   E   +F  +    C   +  Y +L+   CK+G L+ A ++ RS+    + 
Sbjct: 290 DGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIP 349

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+V TY++++ GL  +G++  A + F  +      P  + +  L+RG  +     + ++ 
Sbjct: 350 PDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKY 409

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
             +M +  + PD +   ++V++L K 
Sbjct: 410 YVEMLDRRLAPDPATCKLLVEMLCKR 435



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 216/423 (51%), Gaps = 13/423 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+        ++L+    P+      L+  LC   ++ +A A+F   R   C P V T 
Sbjct: 17  GRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF---RGIQCSPSVITL 73

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C       AL LF EM      F +V  P   TYT II   CK   +D+A++L
Sbjct: 74  NILINGFCELQLLDKALELFHEMEKN---FALV--PEATTYTAIIKCYCKMDRLDQARQL 128

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELC 180
           L +        +V+  TSV RGFC A+  +EA +L ++M++ +  +P++V +NVI+   C
Sbjct: 129 LEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFC 186

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF--VSMESMGCKHT 238
           K G++ EA  +L+ ++  G  P+A TY TL+DGFC +G ++ A +LF  +S      +  
Sbjct: 187 KAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPN 246

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +++ LI+G CK   +E A  L  +M ++ ++ D   + TL  GL +  +     ++F+
Sbjct: 247 VVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFE 306

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM R G      TY T +   CK G + +A ++  ++       D+  Y  L++GL ++G
Sbjct: 307 EMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENG 366

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           ++  A E F  +      P  V YS ++ G C    +D+A   +++M +  + P+  T  
Sbjct: 367 KVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCK 426

Query: 419 MLI 421
           +L+
Sbjct: 427 LLV 429



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 171/343 (49%), Gaps = 9/343 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             P+A T+T++IK  C   R+ +A  L  +     C  DV   T++  G C+      A 
Sbjct: 102 LVPEATTYTAIIKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAY 159

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L  +M           +P+ V +  II G CK G V +A E+L  +      PN VTYT
Sbjct: 160 QLLLDMVEKKSA-----KPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYT 214

Query: 139 SVIRGFCYAKDWNEAKRLF--IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           ++I GFC + + +EA +LF  +   D   +PNVVTFN ++  LCK  +++ A  L+  M 
Sbjct: 215 TLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK 274

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
              +R D FTY TL+DG C  GR +    +F  M   GC  +V +Y+ L++ +CK   ++
Sbjct: 275 ARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQ 334

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  +   M++KGI PDV  +  L  GLFE  +V  A + F+++ R         Y   +
Sbjct: 335 DAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALV 394

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            G CK   + EAV+ +  +   +   D      L++ LCK GR
Sbjct: 395 RGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 186/381 (48%), Gaps = 12/381 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +P  +T   LI G C    + +A  LF ++ + F   P+  TYT ++   C+      A 
Sbjct: 67  SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQAR 126

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTY 137
            L EE +         C  + +  T++  G CK   VD+A +LLL M + K+ KP++V +
Sbjct: 127 QLLEESS--------CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I GFC A    EA  +   ++  G  PN VT+  ++D  CK+G + EA +L  ++  
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 198 --HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
             H   P+  T+N L+ G C   R+ HA EL   M++   +   F+Y+ L++G CK    
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
                ++ EML +G  P VV + TL     +   ++ A ++   M   G+  D  TY   
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           ++GL +NG +  A E F  +   +C      Y++L+ G CK+  ++ A++ +  +    L
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418

Query: 376 VPNVVTYSIMIGGLCNDGQMD 396
            P+  T  +++  LC  G+ D
Sbjct: 419 APDPATCKLLVEMLCKRGRTD 439



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 9/310 (2%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTI 75
           SC + D +  TS+ +G C   R+ EA  L   +      +PD+  +  +++G C+     
Sbjct: 133 SCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVR 192

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL--LLQMKDKNIKPN 133
            A  + E + +        C PN VTYTT+IDG CK G + +A +L  +L  +D + +PN
Sbjct: 193 EAYEMLETLVSMG------CVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPN 246

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+ ++I G C A     A  L  +M  + ++ +  T+  +MD LCK G+  E SR+ +
Sbjct: 247 VVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFE 306

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M++ G  P   TY TL+   C  G +  A+++  SM + G    V +Y++L+ G  +N 
Sbjct: 307 EMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENG 366

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           ++  A   + ++L +   P  V+++ L  G  +   V+ A K + EM    +A D  T +
Sbjct: 367 KVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCK 426

Query: 314 TFIDGLCKNG 323
             ++ LCK G
Sbjct: 427 LLVEMLCKRG 436



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 98/184 (53%), Gaps = 6/184 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+ H F ++ ++       D  T+T+L+ GLC + R  E + +F ++   GC P V TYT
Sbjct: 262 RLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYT 321

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TLV+  C+      A  +   M       G+   P+  TYT +++GL + G V  A E  
Sbjct: 322 TLVHAHCKAGSLQDAQQVIRSMVAK----GI--PPDVTTYTVLLEGLFENGKVRTATEFF 375

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            ++  +   P  V Y++++RG C A   +EA + ++EM+D+ + P+  T  ++++ LCK 
Sbjct: 376 EKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435

Query: 183 GKMD 186
           G+ D
Sbjct: 436 GRTD 439



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           F++S+LI G CK   +  A+  Y++ML +   P++   N L   L +  ++++A  +F  
Sbjct: 4   FTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRG 63

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSG 358
           +Q    +    T    I+G C+   + +A+ELFH + +      +   Y ++I   CK  
Sbjct: 64  IQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITF 417
           RL+ A +L     C     +V+  + +  G C   ++D+A  L LDM E+ +  P+++ +
Sbjct: 121 RLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           +++I GF +     +  E+L  +  +  +P+A   + ++D   K+     +L  F V   
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 478 QEEVDESNV 486
           ++   E NV
Sbjct: 239 RDHHAEPNV 247



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 6/144 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    V   +L+    P  VT+T+L+   C    + +A  +   +   G  PDV TY
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ GL        A   FE++          C P  V Y+ ++ G CK   VD+A + 
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKILRER------CPPCAVVYSALVRGCCKAALVDEAVKY 409

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFC 145
            ++M D+ + P+  T   ++   C
Sbjct: 410 YVEMLDRRLAPDPATCKLLVEMLC 433


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 232/446 (52%), Gaps = 15/446 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  TF+ LI GLC   R+ EA   + ++    C P++     L+  LC+      A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTYTS 139
           F          G+ C P+ +T   +I+G C+   +DKA EL  +M K+  + P   TYT+
Sbjct: 61  FR---------GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQH 198
           +I+ +C     ++A++L  E        +V+    +    CK  ++DEA +LL D++ + 
Sbjct: 112 IIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
             +PD   +N ++ GFC  GRV  A E+  ++ SMGC     +Y+ LI+G+CK+  +  A
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229

Query: 259 LSLYSEMLSKG--IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
           L L+  + S+    +P+VV  N L  GL +  ++E AF+L  +M+   + ADT+TY T +
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           DGLCK G   E   +F  +    C   +  Y +L+   CK+G L+ A ++ RS+    + 
Sbjct: 290 DGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIP 349

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+V TY++++ GL  +G++  A + F  +      P  + +  L+RG  +     + ++ 
Sbjct: 350 PDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKY 409

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
             +M +  + PD +   ++V++L K 
Sbjct: 410 YVEMLDRRLAPDPATCKLLVEMLCKR 435



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 171/343 (49%), Gaps = 9/343 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             P+A T+T++IK  C   R+ +A  L  +     C  DV   T++  G C+      A 
Sbjct: 102 LVPEATTYTAIIKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAY 159

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L  +M           +P+ V +  II G CK G V +A E+L  +      PN VTYT
Sbjct: 160 QLLLDMVEKKSA-----KPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYT 214

Query: 139 SVIRGFCYAKDWNEAKRLF--IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           ++I GFC + + +EA +LF  +   D   +PNVVTFN ++  LCK  +++ A  L+  M 
Sbjct: 215 TLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK 274

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
              +R D FTY TL+DG C  GR +    +F  M   GC  +V +Y+ L++ +CK   ++
Sbjct: 275 ARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQ 334

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  +   M++KGI PDV  +  L  GLFE  +V  A + F+++ R         Y   +
Sbjct: 335 DAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALV 394

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            G CK   + EAV+ +  +   +   D      L++ LCK GR
Sbjct: 395 RGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 186/381 (48%), Gaps = 12/381 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +P  +T   LI G C    + +A  LF ++ + F   P+  TYT ++   C+      A 
Sbjct: 67  SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQAR 126

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTY 137
            L EE +         C  + +  T++  G CK   VD+A +LLL M + K+ KP++V +
Sbjct: 127 QLLEESS--------CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I GFC A    EA  +   ++  G  PN VT+  ++D  CK+G + EA +L  ++  
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 198 --HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
             H   P+  T+N L+ G C   R+ HA EL   M++   +   F+Y+ L++G CK    
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
                ++ EML +G  P VV + TL     +   ++ A ++   M   G+  D  TY   
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           ++GL +NG +  A E F  +   +C      Y++L+ G CK+  ++ A++ +  +    L
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418

Query: 376 VPNVVTYSIMIGGLCNDGQMD 396
            P+  T  +++  LC  G+ D
Sbjct: 419 APDPATCKLLVEMLCKRGRTD 439



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 147/272 (54%), Gaps = 5/272 (1%)

Query: 3   RVSHGF-VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           RV   + ++L  + K    PD V +  +I G C   R+ EA  +   L   GC P+  TY
Sbjct: 154 RVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTY 213

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++G C++ +   AL LF+ +++ +       EPN VT+  +I GLCK   ++ A EL
Sbjct: 214 TTLIDGFCKSGNLSEALQLFKVLSSRDHHA----EPNVVTFNALISGLCKADRLEHAFEL 269

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + QMK ++++ +  TYT+++ G C     +E  R+F EM+ +G  P+VVT+  ++   CK
Sbjct: 270 VKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCK 329

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A +++  M+  G+ PD  TY  LL+G    G+V  A E F  +    C      
Sbjct: 330 AGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVV 389

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           YS L+ G CK   ++ A+  Y EML + + PD
Sbjct: 390 YSALVRGCCKAALVDEAVKYYVEMLDRRLAPD 421



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 9/310 (2%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTI 75
           SC + D +  TS+ +G C   R+ EA  L   +      +PD+  +  +++G C+     
Sbjct: 133 SCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVR 192

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL--LLQMKDKNIKPN 133
            A  + E + +        C PN VTYTT+IDG CK G + +A +L  +L  +D + +PN
Sbjct: 193 EAYEMLETLVSMG------CVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPN 246

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VVT+ ++I G C A     A  L  +M  + ++ +  T+  +MD LCK G+  E SR+ +
Sbjct: 247 VVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFE 306

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M++ G  P   TY TL+   C  G +  A+++  SM + G    V +Y++L+ G  +N 
Sbjct: 307 EMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENG 366

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           ++  A   + ++L +   P  V+++ L  G  +   V+ A K + EM    +A D  T +
Sbjct: 367 KVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCK 426

Query: 314 TFIDGLCKNG 323
             ++ LCK G
Sbjct: 427 LLVEMLCKRG 436



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 124/231 (53%), Gaps = 8/231 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVF 59
           GRV   + +L  ++     P+AVT+T+LI G C    + EA  LF  L  R    EP+V 
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           T+  L++GLC+      A  L ++M   +         +T TYTT++DGLCK+G   +  
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARD------LRADTFTYTTLMDGLCKQGRTSEVS 302

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  +M  +   P+VVTYT+++   C A    +A+++   M+ +G+ P+V T+ V+++ L
Sbjct: 303 RVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGL 362

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            +NGK+  A+   + +++    P A  Y+ L+ G C    V+ A + +V M
Sbjct: 363 FENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 98/184 (53%), Gaps = 6/184 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+ H F ++ ++       D  T+T+L+ GLC + R  E + +F ++   GC P V TYT
Sbjct: 262 RLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYT 321

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TLV+  C+      A  +   M       G+   P+  TYT +++GL + G V  A E  
Sbjct: 322 TLVHAHCKAGSLQDAQQVIRSMVAK----GI--PPDVTTYTVLLEGLFENGKVRTATEFF 375

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            ++  +   P  V Y++++RG C A   +EA + ++EM+D+ + P+  T  ++++ LCK 
Sbjct: 376 EKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435

Query: 183 GKMD 186
           G+ D
Sbjct: 436 GRTD 439



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 7/249 (2%)

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           F++S+LI G CK   +  A+  Y++ML +   P++   N L   L +   +++A  +F  
Sbjct: 4   FTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRG 63

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSG 358
           +Q    +    T    I+G C+   + +A+ELFH + +      +   Y ++I   CK  
Sbjct: 64  IQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITF 417
           RL+ A +L     C     +V+  + +  G C   ++D+A  L LDM E+ +  P+++ +
Sbjct: 121 RLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           +++I GF +     +  E+L  +  +  +P+A   + ++D   K+     +L  F V   
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 478 QEEVDESNV 486
           ++   E NV
Sbjct: 239 RDHHAEPNV 247



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 6/144 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    V   +L+    P  VT+T+L+   C    + +A  +   +   G  PDV TY
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ GL        A   FE++          C P  V Y+ ++ G CK   VD+A + 
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKILRER------CPPCAVVYSALVRGCCKAALVDEAVKY 409

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFC 145
            ++M D+ + P+  T   ++   C
Sbjct: 410 YVEMLDRRLAPDPATCKLLVEMLC 433


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/419 (32%), Positives = 221/419 (52%), Gaps = 11/419 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           T D  T+T+++  L    +I EA AL  K+   GC P + TY  L+NGLC+      A++
Sbjct: 31  TIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAID 90

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L  ++ + NG     C P+ VTYT++IDGL K+    +A +L  +M  + +  + V YT+
Sbjct: 91  LLRKIVD-NG-----CTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTA 144

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +IRG   A    +A  ++  M  QG  P+VVT + ++D LCK G++  A R+   M   G
Sbjct: 145 LIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG 204

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+   Y+ L+ G C   +++ A E+   M+   C     +Y+ILI+G CK+ ++  A 
Sbjct: 205 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAAR 264

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           + + EML  G KPDV  +N L  G  +    + A  +FD+M  +  + +  TY T I GL
Sbjct: 265 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGL 324

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   + +A   +  ++   C  D   Y+SL+DGLCKSG+LE    LF  +     V N 
Sbjct: 325 CKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME-RSGVANS 383

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIE 435
            T + +I  LC   ++D+A  LF  + +   +P+   ++ +I   I   ++NE   V +
Sbjct: 384 QTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQ 441



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 225/442 (50%), Gaps = 9/442 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           TF+ LI GL     +++A +L  +    GC  D+ TYTT+V+ L +      A+ L E++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 85  -ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
            ANG       C P   TY  +++GLCK G +++A +LL ++ D    P+VVTYTS+I G
Sbjct: 61  TANG-------CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 113

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
               K   EA +LF EM  +G+  + V +  ++  L + GK+ +AS +   M   G  PD
Sbjct: 114 LGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD 173

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             T +T++DG C  GR+  A  +F SME+ G       YS LI+G CK ++++ AL + +
Sbjct: 174 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 233

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           +M      PD + +N L  GL +   V  A   FDEM   G   D +TY   I G CK G
Sbjct: 234 QMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 293

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
               A  +F  +   +C  ++  Y +LI GLCK  +L  A   ++ +      P+   YS
Sbjct: 294 NTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYS 353

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            ++ GLC  G+++    LF +ME + V  N  T   LI    + N   + + L + +++ 
Sbjct: 354 SLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKE 412

Query: 444 NVMPDASIVSIVVDLLAKNEIS 465
            +    +  SI+  L+   +++
Sbjct: 413 GMPHPYAYNSIISALIKSGKVN 434



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 200/370 (54%), Gaps = 8/370 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+     +L +I+ +  TPD VT+TSLI GL  + R  EA  LF ++   G   D   
Sbjct: 82  MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVC 141

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ GL +      A ++++ M +        C P+ VT +T+IDGLCK G +  A  
Sbjct: 142 YTALIRGLLQAGKIPQASSVYKTMTSQG------CVPDVVTLSTMIDGLCKAGRIGAAVR 195

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M+ + + PN V Y+++I G C A+  + A  +  +M      P+ +T+N+++D LC
Sbjct: 196 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 255

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G +  A    D M++ G +PD +TYN L+ GFC  G  + A  +F  M S  C   V 
Sbjct: 256 KSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVV 315

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI+G CK +++  A   Y  M  +G  PD  ++++L  GL +  ++E    LFDEM
Sbjct: 316 TYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 375

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +R+GV A++ T    I  LCK   + EAV LF+ +R         AYNS+I  L KSG++
Sbjct: 376 ERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISALIKSGKV 433

Query: 361 EIALELFRSL 370
                +++ +
Sbjct: 434 NEGQAVYQEM 443



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 60/126 (47%)

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           ++ LI+GL K+G L  A  L +         ++ TY+ ++  L  + ++ +A  L   + 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
            N   P + T++ L+ G  ++    + I+LL K+ +    PD    + ++D L K + S 
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 467 NSLPSF 472
            +   F
Sbjct: 122 EAYKLF 127


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 232/461 (50%), Gaps = 6/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V  G  +L  + +    P+ VT+  LI GL  +    +A  L  ++   G +   +TY
Sbjct: 248 GKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTY 307

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G         AL+L EEM            P   TY + I GLCK G +  A + 
Sbjct: 308 NPLIYGYFNKGMLAEALSLQEEMVLKGAS------PTVATYNSFIYGLCKLGRMSDAMQQ 361

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M   N+ P+VV+Y ++I G+C   +  +A  LF E+    + P +VT+N ++D LC+
Sbjct: 362 LSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR 421

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++ A +L   MI  G+ PD  TY  L++G C  G ++ A+E F  M   G +   ++
Sbjct: 422 QGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYA 481

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  I G  K  +   A SL  EML+KG  PD++I+N +  GL ++  +E A +L  +M 
Sbjct: 482 YATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMV 541

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +GV  D  TY + I    +NG + +  E+F+ +        +  Y  LI G    GRLE
Sbjct: 542 SDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLE 601

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A   F  +    ++PNV+TY+ +I GLC   +MD+A + F +M E  + PN  ++ +LI
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                +    + + L  +M +  V PD+   S ++  L K+
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 236/458 (51%), Gaps = 6/458 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V     V  +++KS  +PD      +++ L  +  + +A  ++  +  FG +P + TY T
Sbjct: 180 VEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNT 239

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++  C+       L+L  EM          C PN VTY  +I+GL K+G  ++AK L+ 
Sbjct: 240 LLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDVTYNVLINGLSKKGEFEQAKGLIG 293

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M    +K +  TY  +I G+       EA  L  EM+ +G  P V T+N  +  LCK G
Sbjct: 294 EMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLG 353

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           +M +A + L  M+ + + PD  +YNTL+ G+C  G +  A  LF  + S+    T+ +Y+
Sbjct: 354 RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYN 413

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            L++G C+  E+E A  L  EM+++GI PD+V +  L  G  ++  +  A + FDEM   
Sbjct: 414 TLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHE 473

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  D++ Y T I G  K G    A  L   +       D+  YN ++DGLCK G LE A
Sbjct: 474 GLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 533

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            EL + +    ++P+ VTY+ +I     +G++ K R++F +M    + P+V+T+ +LI G
Sbjct: 534 SELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                   +      +M+E  ++P+    + +++ L K
Sbjct: 594 HAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 198/366 (54%), Gaps = 6/366 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+S     L  +L +   PD V++ +LI G C    +M+A  LF +LR     P + T
Sbjct: 352 LGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++GLCR     VA  L  EM N     G+   P+ VTYT +++G CK G +  A+E
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINE----GIA--PDIVTYTILVNGSCKMGSLSMAQE 465

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M  + ++ +   Y + I G     D + A  L  EM+ +G  P+++ +NV++D LC
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G ++EAS LL  M+  GV PD  TY +++      GR+   +E+F  M S G   +V 
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVV 585

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++LI+G+     +E A   +SEM  KGI P+V+ +N+L  GL ++ ++++A+  F EM
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  + ++Y   I+  C  G   EA+ L+  +     + D   +++L+  L K  +L
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705

Query: 361 EIALEL 366
           +   +L
Sbjct: 706 QAVRQL 711



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 139/277 (50%)

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   +++   + D MI+  + PD    N +L        ++ A E++ +M   G K T+ 
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L++ YCK  +++  L L SEM  +G  P+ V +N L  GL +  + E+A  L  EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + G+    +TY   I G    G + EA+ L   + +      +  YNS I GLCK GR+
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A++    +    L+P+VV+Y+ +I G C  G + KA  LF ++    + P ++T++ L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + G  R  E     +L  +M    + PD    +I+V+
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 6/195 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +L +++     PD VT+TS+I       R+ +   +F ++   G  P V T
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G         A   F EM     E G++  PN +TY ++I+GLCK   +D+A  
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQ----EKGIL--PNVITYNSLINGLCKVRRMDQAYN 640

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M +K I PN  +YT +I   C   +W EA  L+ +M+D+GVQP+  T + ++ +L 
Sbjct: 641 FFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLG 700

Query: 181 KNGKMDEASRLLDLM 195
           K+ K+    +L  L+
Sbjct: 701 KDCKLQAVRQLESLL 715



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 38/267 (14%)

Query: 234 GCKHTVFSYSIL---INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
           GC  +  S  IL   I  Y K   +E  LS++ +M+   + PDV   N +   L +   +
Sbjct: 156 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 215

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
            +A +++  M   G+     TY T +D  CK G + + ++L   ++   C  +   YN L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 351 IDGLCKSGRLEIALELF-RSLPCGVLV--------------------------------- 376
           I+GL K G  E A  L    L  G+ V                                 
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 377 -PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P V TY+  I GLC  G+M  A     DM  N ++P+V++++ LI G+ R+    K   
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKN 462
           L  +++ I + P     + ++D L + 
Sbjct: 396 LFDELRSIYLFPTIVTYNTLLDGLCRQ 422


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 243/484 (50%), Gaps = 24/484 (4%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           + VL  I +  F+  A  FT LI+       I +A   F  ++ F C+PDVFTY T+++ 
Sbjct: 111 WQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHV 170

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           + R    ++AL ++  M   N      C PN  T++ +IDG+CK G    A ++  +M  
Sbjct: 171 MVRKEVVLLALGIYNRMLKLN------CLPNIATFSILIDGMCKSGKTQNALQMFDEMTQ 224

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + I PN +TYT +I G C A+  + A RLFI M D G  P+ VT+N ++   CK G++DE
Sbjct: 225 RRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDE 284

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  LL    +     D   Y+ L+DG     R   A+  +  M     K  V  Y+I++ 
Sbjct: 285 ALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMK 344

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G  K  + + AL L +EM  +G+ PD   +N L  G  ++  ++ A  L  E+ +N   +
Sbjct: 345 GLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFS 404

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
              TY   I G+C++G + +A ++F+ +    C   +  +N+LIDG CK+G +E A  LF
Sbjct: 405 SACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLF 464

Query: 368 RSLPCGV-------------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
             +  G               V +  +   M+  LC+ G + KA ++ + + ++   PN+
Sbjct: 465 YKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNI 524

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD-LLAKNEISLNSLPSFT 473
           IT+++LI GF +    +   +L  +++   + PD+     +++ LL+ N        +FT
Sbjct: 525 ITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANR----EEDAFT 580

Query: 474 VHEQ 477
           V +Q
Sbjct: 581 VLDQ 584



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 244/521 (46%), Gaps = 65/521 (12%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +L    K  +  D   ++ LI GL    R  +A   + K+     +PDV  
Sbjct: 279 LGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVIL 338

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT ++ GL +      AL L  EM     E G+V  P+T  Y  +I G C  G +D+AK 
Sbjct: 339 YTIMMKGLSKAGKFKDALRLLNEMT----ERGLV--PDTHCYNALIKGYCDLGLLDEAKS 392

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L++   +   +  TYT +I G C +    +A+++F EM   G  P+VVTFN ++D  C
Sbjct: 393 LHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFC 452

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAF--------------TYNTLLDGFCLTGRVNHAKEL 226
           K G +++A +LL   ++ G  P  F              +  T+++  C +G +  A  +
Sbjct: 453 KAGNIEKA-QLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNI 511

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
            + +   G    + +Y+ILI+G+CK   I GA  L+ E+  KG+ PD V + TL  GL  
Sbjct: 512 LMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLS 571

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTLR--------I 337
            ++ E AF + D++ +NG    T  Y++F+   C+   I  A  L+   LR        +
Sbjct: 572 ANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEV 631

Query: 338 LKC-------------------------EFDIRAYNSLIDGLCKSGRLEIALELFRSL-P 371
           LK                          +F +  Y   + GLC++GRLE AL++F +L  
Sbjct: 632 LKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEE 691

Query: 372 CGVLV--PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI-N 428
             VLV  P+ V    +I  L   G +D A ++FL   +   +      + L++  +R  +
Sbjct: 692 HNVLVTPPSCVK---LIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLRSED 748

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLL---AKNEISL 466
           + ++  +LL +MK +    D+ +      LL   A +++SL
Sbjct: 749 KRNRAFDLLSRMKSLGYDLDSHLHQTTKFLLQGDAGHQVSL 789



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 172/362 (47%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           V++  IID L K+   +   ++L ++K      +   +T +I+ +       +A   F  
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M D   +P+V T+N ++  + +   +  A  + + M++    P+  T++ L+DG C +G+
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
             +A ++F  M          +Y+I+I+G C+ ++ + A  L+  M   G  PD V +N 
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G  ++ +V+ A  L    +++    D   Y   IDGL +     +A   +  +    
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + D+  Y  ++ GL K+G+ + AL L   +    LVP+   Y+ +I G C+ G +D+A+
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            L L++ +N    +  T+ +LI G  R        ++ ++M++    P     + ++D  
Sbjct: 392 SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGF 451

Query: 460 AK 461
            K
Sbjct: 452 CK 453



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 15/334 (4%)

Query: 120 ELLLQMKDKNIKPNVVTY-----TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           E  L+ K   + P++VTY      + + GF          R FI         + V+ N+
Sbjct: 47  EPALESKVPFLSPSIVTYIIKNPPNSLLGF----------RFFIWASKFRRLRSWVSHNM 96

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           I+D L K+   +   ++L  + + G    A  +  L+  +     +  A E F  M+   
Sbjct: 97  IIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFD 156

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           CK  VF+Y+ +++   + + +  AL +Y+ ML     P++   + L  G+ +  + + A 
Sbjct: 157 CKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNAL 216

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           ++FDEM +  +  +  TY   I GLC+      A  LF  ++   C  D   YN+L+ G 
Sbjct: 217 QMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGF 276

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK GR++ AL L +       V +   YS +I GL    + + A+  +  M E+ + P+V
Sbjct: 277 CKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDV 336

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           I + ++++G  +  +    + LL++M E  ++PD
Sbjct: 337 ILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPD 370


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 234/448 (52%), Gaps = 6/448 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +     +   +L S F  + + ++ L+  LC   ++ EA  L  ++     +PD+ T
Sbjct: 304 MGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVT 363

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L++GLC+      A+ L++EM      F  +  PN+  ++ I+ GLC++G +  A+ 
Sbjct: 364 YSILIHGLCKQGKVQQAIQLYKEMC-----FNRIF-PNSFAHSGILKGLCEKGMLSDARM 417

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               +   N++P+V  Y  +I G+    D  EA RL+  + D+ + P++VTFN ++   C
Sbjct: 418 YFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFC 477

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KN K+ EA RLL+ +  HG+ P A TY TL++ +C  G +N   EL + M     + TV 
Sbjct: 478 KNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVV 537

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I G CK +++E ++ L  +M +KG+ PD + +NT+     +   + +AF+L D+M
Sbjct: 538 TYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM 597

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             + +     TY   IDGLC+ G + +A  +  +L+         AY ++I   C  G  
Sbjct: 598 LIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDA 657

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A+++F  +       ++  YS +I  LC    +++A+  F  M  + V P+   F+M+
Sbjct: 658 QRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMM 717

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  F R      V ELL  M +  ++ D
Sbjct: 718 LNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 228/444 (51%), Gaps = 7/444 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P  V+F +++   C       A + F  +  +G  PD ++Y  L++GL        AL
Sbjct: 181 FAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEAL 240

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTY 137
            L  +M           +P+ VTY  +  G    G +  A+E++ +M  D+ +KP++VTY
Sbjct: 241 ELTNDMEKQG------LQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTY 294

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           T +I G C   +  EA RL  +++  G Q NV+ ++V++  LCK G++DEA +LL  M  
Sbjct: 295 TVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEA 354

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           + ++PD  TY+ L+ G C  G+V  A +L+  M         F++S ++ G C+   +  
Sbjct: 355 NNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSD 414

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A   +  ++   ++PDV ++N +  G  ++  VE A +L+  ++   +     T+ + I 
Sbjct: 415 ARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIY 474

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G CKN  +VEA  L  ++++   E     Y +L++  C+ G +    EL   +    + P
Sbjct: 475 GFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEP 534

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
            VVTY+++I GLC   +++++  L  DM    + P+ IT++ +I+ F +  +  K  ELL
Sbjct: 535 TVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELL 594

Query: 438 HKMKEINVMPDASIVSIVVDLLAK 461
             M   N+ P  +  ++++D L +
Sbjct: 595 DDMLIHNLEPTPATYNVLIDGLCR 618



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 216/432 (50%), Gaps = 5/432 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +LK    PD  ++  LI GL     + EA  L   +   G +PD+ TY  +  G      
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGL 270

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  + ++M    G      +P+ VTYT +I G C+ G +++A  L   +     + N
Sbjct: 271 MSGAREIIQKMLTDEG-----LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLN 325

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V+ Y+ ++   C     +EA +L  EM    +QP++VT+++++  LCK GK+ +A +L  
Sbjct: 326 VILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYK 385

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M  + + P++F ++ +L G C  G ++ A+  F S+     +  V  Y+I+I+GY K  
Sbjct: 386 EMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLG 445

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           ++E A+ LY  +  K I P +V  N+L  G  +  +V  A +L + ++ +G+     TY 
Sbjct: 446 DVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYT 505

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T ++  C+ G I +  EL   + +   E  +  Y  +I GLCK  +LE +++L   +   
Sbjct: 506 TLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAK 565

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            L P+ +TY+ +I   C    M KA +L  DM  + + P   T+++LI G  R  +    
Sbjct: 566 GLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDA 625

Query: 434 IELLHKMKEINV 445
             +L  +++ N+
Sbjct: 626 DRVLVSLQDRNI 637



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 219/467 (46%), Gaps = 17/467 (3%)

Query: 6   HGFVVLGRIL----------KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGC 54
           HG +V G +           K    PD VT+  + KG      +  A  +  K+    G 
Sbjct: 228 HGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGL 287

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           +PD+ TYT L+ G C+  +   AL L  ++ +   +       N + Y+ ++  LCK G 
Sbjct: 288 KPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQL------NVILYSVLLSSLCKRGQ 341

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           VD+A +LL +M+  N++P++VTY+ +I G C      +A +L+ EM    + PN    + 
Sbjct: 342 VDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSG 401

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           I+  LC+ G + +A    D +I   +RPD   YN ++DG+   G V  A  L+  +    
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
              ++ +++ LI G+CKN+++  A  L   +   G++P  V + TL     E   + +  
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLH 521

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +L  EM    +     TY   I GLCK   + E+V+L   +R      D   YN++I   
Sbjct: 522 ELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCF 581

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK+  +  A EL   +    L P   TY+++I GLC  G ++ A  + + +++  +    
Sbjct: 582 CKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTK 641

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + +  +I+      +  + +++ H+M E          S V++ L K
Sbjct: 642 VAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCK 688



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 190/373 (50%), Gaps = 37/373 (9%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTS--------------------------------VIR 142
           V  A  +L++MK++N++P++ TY S                                ++ 
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVD 158

Query: 143 GFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           G C    + +A  LF+   D +   P+VV+FN IM   CK G  D A     +M+++G+ 
Sbjct: 159 GLCGQSRFRDAV-LFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL 217

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD ++YN L+ G  + G +  A EL   ME  G +  + +Y I+  G+     + GA  +
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 262 YSEMLS-KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
             +ML+ +G+KPD+V +  L  G  ++  +E A +L  ++  +G   +   Y   +  LC
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + EA++L + +     + D+  Y+ LI GLCK G+++ A++L++ +    + PN  
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            +S ++ GLC  G +  AR  F  +  + + P+V  ++++I G++++ +  + + L  ++
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 441 KEINVMPDASIVS 453
           ++  + P  SIV+
Sbjct: 458 RDKAITP--SIVT 468


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 231/435 (53%), Gaps = 14/435 (3%)

Query: 12  GRILKSCF----TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           GR+++  F     P+  TF  +I  LC E  + EA +LF++++  GC PDV T+ +L++G
Sbjct: 173 GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDG 232

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
             +         L EEM          C+ + VTY  +I+  CK G ++ A      MK 
Sbjct: 233 YGKCGELDEVEQLVEEMRRSG------CKADVVTYNALINCFCKFGRMETAYGYFAAMKR 286

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + +  NVVT+++ +  FC      EA +LF +M  +G+  N  T+  ++D  CK G++D+
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDD 346

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  LLD M++ GV  +  TY  L+DG C   +V  A+++   ME  G +     Y+ LI+
Sbjct: 347 AIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIH 406

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+  NK  E AL L SEM +KG++ D+ ++  L  GL  +H+++ A  L  +M  +G+  
Sbjct: 407 GHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLEIALE 365
           +   Y T +D   K+G + EA+ +    +IL   F  ++  Y +LIDGLCK+G ++ A+ 
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQ--KILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
            F  +    L PNV  Y+ ++ GLC +G +++A  LF +M    +  + + +  L+ G++
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYL 584

Query: 426 RINEPSKVIELLHKM 440
           +         L  KM
Sbjct: 585 KQGNLHDAFALKAKM 599



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 233/455 (51%), Gaps = 6/455 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++    +  R+ +    PD VTF SLI G      + E   L  ++R  GC+ DV TY
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTY 261

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N  C+      A   F  M       GV+   N VT++T +D  CKEG V +A +L
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMKRE----GVM--ANVVTFSTFVDAFCKEGLVREAMKL 315

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM+ + +  N  TYT +I G C A   ++A  L  EM+ QGV  NVVT+ V++D LCK
Sbjct: 316 FAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+ EA  +L +M + GVR +   Y TL+ G  +      A  L   M++ G +  +  
Sbjct: 376 ERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISL 435

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LI G C   +++ A SL ++M   G++P+ +I+ T+    F+  +V  A  +  ++ 
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKIL 495

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   +  TY   IDGLCK G I EA+  F+ +R L  + +++AY +L+DGLCK+G L 
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A++LF  +    +  + V Y+ ++ G    G +  A  L   M ++ +  ++  +   I
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 615

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            GF  +N   +  E+  +M    + PD ++ + ++
Sbjct: 616 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 215/440 (48%), Gaps = 10/440 (2%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           A    +L+  L     + +A     ++R     P+  T   ++  L R     +   LFE
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           ++            PN  T+  +ID LCKEG + +A+ L  +MK+    P+VVT+ S+I 
Sbjct: 182 QLP----------APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+    + +E ++L  EM   G + +VVT+N +++  CK G+M+ A      M + GV  
Sbjct: 232 GYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           +  T++T +D FC  G V  A +LF  M   G     F+Y+ LI+G CK   ++ A+ L 
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM+ +G+  +VV +  L  GL +  +V  A  +   M++ GV A+   Y T I G   N
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
               +A+ L   ++    E DI  Y +LI GLC   +L+ A  L   +    L PN + Y
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + M+      G++ +A  +   + ++   PNVIT+  LI G  +     + I   +KM++
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 443 INVMPDASIVSIVVDLLAKN 462
           + + P+    + +VD L KN
Sbjct: 532 LGLDPNVQAYTALVDGLCKN 551



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%)

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           +N +ID LCK G L  A  LF  +     +P+VVT++ +I G    G++D+   L  +M 
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
            +    +V+T++ LI  F +             MK   VM +    S  VD   K  +  
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 467 NSLPSFT 473
            ++  F 
Sbjct: 311 EAMKLFA 317


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 232/461 (50%), Gaps = 6/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V  G  +L  + +    P+ VT+  LI GL  +    +A  L  ++   G +   +TY
Sbjct: 248 GKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTY 307

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G         AL+L EEM            P   TY + I GLCK G +  A + 
Sbjct: 308 NPLIYGYFNKGMLAEALSLQEEMVLKG------ASPTVATYNSFIYGLCKLGRMSDAMQQ 361

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M   N+ P+VV+Y ++I G+C   +  +A  LF E+    + P +VT+N ++D LC+
Sbjct: 362 LSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR 421

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++ A +L   MI  G+ PD  TY  L++G C  G ++ A+E F  M   G +   ++
Sbjct: 422 QGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYA 481

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  I G  K  +   A SL  EML+KG  PD++I+N +  GL ++  +E A +L  +M 
Sbjct: 482 YATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMV 541

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +GV  D  TY + I    +NG + +  E+F+ +        +  Y  LI G    GRLE
Sbjct: 542 SDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLE 601

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A   F  +    ++PNV+TY+ +I GLC   +MD+A + F +M E  + PN  ++ +LI
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                +    + + L  +M +  V PD+   S ++  L K+
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 235/452 (51%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V  +++KS  +PD      +++ L  +  + +A  ++  +  FG +P + TY TL++  C
Sbjct: 186 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 245

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +       L+L  EM          C PN VTY  +I+GL K+G  ++AK L+ +M    
Sbjct: 246 KGGKVQQGLDLLSEMQRRG------CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +K +  TY  +I G+       EA  L  EM+ +G  P V T+N  +  LCK G+M +A 
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 359

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           + L  M+ + + PD  +YNTL+ G+C  G +  A  LF  + S+    T+ +Y+ L++G 
Sbjct: 360 QQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGL 419

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+  E+E A  L  EM+++GI PD+V +  L  G  ++  +  A + FDEM   G+  D+
Sbjct: 420 CRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDS 479

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           + Y T I G  K G    A  L   +       D+  YN ++DGLCK G LE A EL + 
Sbjct: 480 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 539

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    ++P+ VTY+ +I     +G++ K R++F +M    + P+V+T+ +LI G      
Sbjct: 540 MVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGR 599

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +      +M+E  ++P+    + +++ L K
Sbjct: 600 LERAFIYFSEMQEKGILPNVITYNSLINGLCK 631



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 194/361 (53%), Gaps = 6/361 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+S     L  +L +   PD V++ +LI G C    +M+A  LF +LR     P + T
Sbjct: 352 LGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++GLCR     VA  L  EM N          P+ VTYT +++G CK G +  A+E
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEG------IAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M  + ++ +   Y + I G     D + A  L  EM+ +G  P+++ +NV++D LC
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G ++EAS LL  M+  GV PD  TY +++      GR+   +E+F  M S G   +V 
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVV 585

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++LI+G+     +E A   +SEM  KGI P+V+ +N+L  GL ++ ++++A+  F EM
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  + ++Y   I+  C  G   EA+ L+  +     + D   +++L+  L K  +L
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705

Query: 361 E 361
           +
Sbjct: 706 Q 706



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 139/277 (50%)

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   +++   + D MI+  + PD    N +L        ++ A E++ +M   G K T+ 
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L++ YCK  +++  L L SEM  +G  P+ V +N L  GL +  + E+A  L  EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + G+    +TY   I G    G + EA+ L   + +      +  YNS I GLCK GR+
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A++    +    L+P+VV+Y+ +I G C  G + KA  LF ++    + P ++T++ L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + G  R  E     +L  +M    + PD    +I+V+
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 38/267 (14%)

Query: 234 GCKHTVFSYSIL---INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
           GC  +  S  IL   I  Y K   +E  LS++ +M+   + PDV   N +   L +   +
Sbjct: 156 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 215

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
            +A +++  M   G+     TY T +D  CK G + + ++L   ++   C  +   YN L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 351 IDGLCKSGRLEIALELF-RSLPCGVLV--------------------------------- 376
           I+GL K G  E A  L    L  G+ V                                 
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 377 -PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P V TY+  I GLC  G+M  A     DM  N ++P+V++++ LI G+ R+    K   
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKN 462
           L  +++ I + P     + ++D L + 
Sbjct: 396 LFDELRSIYLFPTIVTYNTLLDGLCRQ 422


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 219/454 (48%), Gaps = 22/454 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I + C+ P  + F SL+   C       A  L  K+ + G +P    Y  L+ G+C T  
Sbjct: 3   ITEGCY-PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 74  --TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
             ++  + L E   N   E GVV   N V        LC  G  +KA  ++ +M  K   
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVL--NKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFI 119

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+  TY+ VI   C A    +A +LF EM   G+ P+V T+  ++D  CK G +++A   
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            D M Q G  P+  TY  L+  +  T +++ A E+F  M S GC   + +Y+ LI+G+CK
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239

Query: 252 NKEIEGALSLYSEMLSKGI-----------------KPDVVIHNTLFVGLFEIHQVERAF 294
             E E A  +Y+ M +  +                 +P+VV +  L  GL + H+V+ A 
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            L + M   G   +   Y   IDG CK G + EA E+F  +    C  ++  Y+SLID L
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            K  RL++AL++   +      PNVV Y+ M+ GLC  G+ D+A  L L MEE    PNV
Sbjct: 360 FKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNV 419

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +T+  +I GF +     + +ELL  M      P+
Sbjct: 420 VTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPN 453



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 235/475 (49%), Gaps = 25/475 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    + V+  ++   F PD+ T++ +I  LC  S++ +A  LF +++  G  PDV+T
Sbjct: 100 IGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYT 159

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL++  C+      A N F+EM          C PN VTYT +I    K   + +A E
Sbjct: 160 YTTLLDRFCKVGLIEQARNWFDEMQQDG------CAPNVVTYTALIHAYLKTRKLSRANE 213

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV--------------- 165
           +   M      PN+VTYT++I G C A +  +A +++  M +  V               
Sbjct: 214 IFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSE 273

Query: 166 --QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
             +PNVVT+  ++D LCK  K+ EA  LL+ M   G  P+   Y+ L+DGFC  G+++ A
Sbjct: 274 LKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEA 333

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           +E+F  M   GC   V++YS LI+   K+K ++ AL + ++ML     P+VVI+  +  G
Sbjct: 334 QEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDG 393

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L ++ + + A++L   M+  G   +  TY   IDG  K G +   +EL   +    C  +
Sbjct: 394 LCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPN 453

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              Y  LI+  C +G L+ A +L   +       ++  Y  +I G  +  +   +  L  
Sbjct: 454 FITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSH--EFVASLGLLA 511

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           ++ E+  VP +  + +LI  FI+       +EL  ++   +     + VS++  L
Sbjct: 512 ELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESL 566



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 218/437 (49%), Gaps = 14/437 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ VT+T+LI       ++  A  +F  +   GC P++ TYT L++G C+   T  A  
Sbjct: 189 APNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQ 248

Query: 80  LFEEMANGNGE-------FGVV----CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           ++  M N   +       F +V     EPN VTY  ++DGLCK   V +A++LL  M  +
Sbjct: 249 IYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLE 308

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             +PN + Y ++I GFC     +EA+ +F +M+  G  PNV T++ ++D+L K+ ++D A
Sbjct: 309 GCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLA 368

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++L  M+++   P+   Y  ++DG C  G+ + A  L + ME  GC   V +Y+ +I+G
Sbjct: 369 LKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDG 428

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           + K   ++  L L   M SKG  P+ + +  L         ++ A KL +EM++      
Sbjct: 429 FGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKH 488

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
              YR  I+G       V ++ L   L        +  Y  LID   K+GRLE+ALEL  
Sbjct: 489 IGMYRKVIEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHE 546

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            L          TY  +I  L    ++DKA  L+ DM     VP +     LI+G +R+ 
Sbjct: 547 ELS-SFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVG 605

Query: 429 EPSKVIELLHKMKEINV 445
           +  + ++L   + ++++
Sbjct: 606 KWEEALQLSDSICQMDI 622



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 162/355 (45%), Gaps = 23/355 (6%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE---- 187
           P+ + + S++  +C + D+  A +L  +M+  G QP  V +N+++  +C    +      
Sbjct: 9   PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVI 68

Query: 188 --ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
             A R  + M++ GV  +           C  G+   A  +   M S G      +YS +
Sbjct: 69  GLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKV 128

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I   C   ++E A  L+ EM   GI PDV  + TL     ++  +E+A   FDEMQ++G 
Sbjct: 129 IGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGC 188

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
           A +  TY   I    K   +  A E+F  +    C  +I  Y +LIDG CK+G  E A +
Sbjct: 189 APNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQ 248

Query: 366 L-----------------FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +                 FR +   +  PNVVTY  ++ GLC   ++ +ARDL   M   
Sbjct: 249 IYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLE 308

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
              PN I +D LI GF ++ +  +  E+  KM      P+    S ++D L K++
Sbjct: 309 GCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDK 363



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 23/325 (7%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+ +G  P+ + FN ++   C++G    A +LL  M+  G +P    YN L+ G C T  
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 220 ------VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
                 +  A+  +  M  MG      +        C   + E A ++  EM+SKG  PD
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              ++ +   L    +VE+AF+LF EM+RNG+  D +TY T +D  CK G I +A   F 
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            ++   C  ++  Y +LI    K+ +L  A E+F  +     VPN+VTY+ +I G C  G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 394 QMDKARDLFLDMEENAV-----------------VPNVITFDMLIRGFIRINEPSKVIEL 436
           + +KA  ++  M+ + V                  PNV+T+  L+ G  + ++  +  +L
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
           L  M      P+  I   ++D   K
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCK 326


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++  +C +  + EA  L   L  FGCEPDV +Y  ++ GLC          L EEM    
Sbjct: 235 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR-- 292

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
               + C PN VT+ T+I  LC+ G  ++  E+L QM +    P++  Y ++I G C   
Sbjct: 293 ----MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEG 348

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
               A  +   M   G++PNVV +N ++  LC   + +E   LL  M       D  T+N
Sbjct: 349 HLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 408

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+D FC  G V+   EL   M   GC   V +Y+ +ING+CK   I+ A+ L   M + 
Sbjct: 409 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 468

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G KP+ + +  +  GL    +   A  L  +M + G   +  T+ T I+ LCK G + +A
Sbjct: 469 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 528

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           +EL   + +  C  D+ +Y+++IDGL K+G+ + ALEL   +    + PN + YS +   
Sbjct: 529 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 588

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           L  +G+++K   +F ++++  +  + + ++ +I    +  E  + IE L  M     +P+
Sbjct: 589 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 648

Query: 449 ASIVSIVVDLLAK 461
            S  +I++  LA 
Sbjct: 649 ESTYTILIRGLAS 661



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 219/442 (49%), Gaps = 8/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T+  +++ LCA  RI +A A+  ++   GC P    Y  ++   CR      A+ +
Sbjct: 157 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 216

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            E++ A G       C  +      +++ +C +G VD+A  LL  +     +P+VV+Y +
Sbjct: 217 LEDLHARG-------CALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNA 269

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C AK W   + L  EM+     PN+VTFN ++  LC+NG  +    +L  M++HG
Sbjct: 270 VLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHG 329

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   Y T++DG C  G +  A E+   M S G K  V  Y+ L+ G C  +  E   
Sbjct: 330 CTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETE 389

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L +EM  K    D V  N L     +   V+R  +L ++M  +G   D  TY T I+G 
Sbjct: 390 ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 449

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I EAV L  ++    C+ +  +Y  ++ GLC + R   A +L   +       N 
Sbjct: 450 CKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP 509

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +T++ +I  LC  G +++A +L   M  N   P++I++  +I G  +  +  + +ELL+ 
Sbjct: 510 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 569

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M    + P+  I S +   L++
Sbjct: 570 MVNKGMSPNTIIYSSIASALSR 591



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 200/385 (51%), Gaps = 6/385 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTF +LI  LC          +  ++   GC PD+  Y T+++G+C+  H  VA  +
Sbjct: 297 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 356

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M +    +G+  +PN V Y T++ GLC     ++ +ELL +M DK+   + VT+  +
Sbjct: 357 LNRMPS----YGL--KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 410

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  FC     +    L  +M++ G  P+V+T+  +++  CK G +DEA  LL  M   G 
Sbjct: 411 VDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 470

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P+  +Y  +L G C   R   A++L   M   GC     +++ LIN  CK   +E A+ 
Sbjct: 471 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 530

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +ML  G  PD++ ++T+  GL +  + + A +L + M   G++ +T  Y +    L 
Sbjct: 531 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 590

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G I + +++F  ++      D   YN++I  LCK G  E A+E    +     VPN  
Sbjct: 591 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 650

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDM 405
           TY+I+I GL ++G + +A+++  ++
Sbjct: 651 TYTILIRGLASEGFVKEAQEMLTEL 675



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 202/474 (42%), Gaps = 47/474 (9%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           +V  +SLI+ LCA  R  EAA   +          V  Y  +V G CR      A  L  
Sbjct: 95  SVRLSSLIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLAA 151

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
                     V   PN  TY  ++  LC  G +  A  +L +M  +   P    Y  ++ 
Sbjct: 152 ---------AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILE 202

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
             C    +  A R+  ++  +G   +V   N++++ +C  G +DEA  LL  +   G  P
Sbjct: 203 AACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEP 262

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK----------------------HTVF 240
           D  +YN +L G C+  R    +EL   M  M C                       H V 
Sbjct: 263 DVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVL 322

Query: 241 S-------------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
           +             Y+ +I+G CK   +E A  + + M S G+KP+VV +NTL  GL   
Sbjct: 323 AQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSA 382

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            + E   +L  EM       D  T+   +D  C+NG +   +EL   +    C  D+  Y
Sbjct: 383 ERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITY 442

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            ++I+G CK G ++ A+ L +S+      PN ++Y+I++ GLC+  +   A DL   M +
Sbjct: 443 TTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 502

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                N ITF+ LI    +     + IELL +M      PD    S V+D L K
Sbjct: 503 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 556



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 169/362 (46%), Gaps = 3/362 (0%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  ++ G C+ G ++ A+ L   +    + PN  TY  V+R  C      +A  +  EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G  P    ++VI++  C+ G    A R+L+ +   G   D    N +L+  C  G V+
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  L   + S GC+  V SY+ ++ G C  K       L  EM+     P++V  NTL 
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L      ER  ++  +M  +G   D   Y T IDG+CK G++  A E+ + +     +
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  YN+L+ GLC + R E   EL   +       + VT++I++   C +G +D+  +L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              M E+  +P+VIT+  +I GF +     + + LL  M      P+    +IV+  L  
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 462 NE 463
            E
Sbjct: 487 AE 488



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 144/285 (50%), Gaps = 8/285 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VTF  L+   C    +     L  ++   GC PDV TYTT++NG C+      A+ L 
Sbjct: 403 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 462

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCK-EGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + M          C+PNT++YT ++ GLC  E +VD A++L+ QM  +    N +T+ ++
Sbjct: 463 KSMT------ACGCKPNTISYTIVLKGLCSAERWVD-AEDLMSQMIQQGCPLNPITFNTL 515

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      +A  L  +M+  G  P++++++ ++D L K GK DEA  LL++M+  G+
Sbjct: 516 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 575

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+   Y+++       GR+N   ++F +++    +     Y+ +I+  CK  E E A+ 
Sbjct: 576 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 635

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
             + M+S G  P+   +  L  GL     V+ A ++  E+   G 
Sbjct: 636 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGA 680


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 226/441 (51%), Gaps = 7/441 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+  LI  LC    I +A  LF K+R  G +  V+ Y +L+NG C+      A  L
Sbjct: 394 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 453

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M            P   +Y+ +I GLC+ G +    EL  +M ++ I  N  T+T++
Sbjct: 454 LSGMVKEG------LTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 507

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC  K  +EA RLF +M+D  V PN VTFNV+++  C  G + +A +L D M++ G+
Sbjct: 508 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 567

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD +TY +L+ G CLT  V+ A E    +E+       FS + L+ G+ +         
Sbjct: 568 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 627

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM  +G+K D+V    +     + H  E++  LF EM+  GV  D   Y   ID L 
Sbjct: 628 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 687

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   +++A+  +  + +     +   +  LI+ LCKSG L  A  L + +  G ++PN  
Sbjct: 688 KEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 747

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+  +     +G M+KA+DL   M +  +  ++++F++LI+G  +  +  + I+L+ K+
Sbjct: 748 TYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKI 806

Query: 441 KEINVMPDASIVSIVVDLLAK 461
            E    PD    S ++  L K
Sbjct: 807 TESGFSPDCISYSTIIHELCK 827



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 232/465 (49%), Gaps = 8/465 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           + G VV  R+        AV +  L+ GLC   R+ EA  +   +   G   D  TY TL
Sbjct: 240 ARGLVV--RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V G CR     +AL +  +M       G V  P+    + +ID L K+  V++A  L  +
Sbjct: 298 VYGFCRMEELEMALRITHDMI----RLGFV--PSEANCSFMIDELRKKELVEEAFSLACK 351

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           + D  + PNV  Y ++I   C  + +++A RLF EM  +G++PN VT+ +++  LCK G 
Sbjct: 352 LGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 411

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +++A  L D M   G++   + YN+L++G+C  G ++ A+ L   M   G   T  SYS 
Sbjct: 412 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 471

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI G C+N ++   + L+ EM  +GI  +      L  G  +  +++ A +LFD+M  + 
Sbjct: 472 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 531

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           V  +  T+   I+G C  G I +A +L+  +  +  + D   Y SLI GLC +  +  A 
Sbjct: 532 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 591

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E    L     V N  + + ++ G   +G+  +   L+ +M    V  ++++F +++   
Sbjct: 592 EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 651

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           ++ ++  K   L  +MKE  V PD    + ++D L+K E  + +L
Sbjct: 652 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 696



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 213/458 (46%), Gaps = 12/458 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++H  + LG      F P     + +I  L  +  + EA +L  KL   G  P+VF Y 
Sbjct: 312 RITHDMIRLG------FVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 365

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++ LC+      A  LF+EMA G G      EPN VTY  +I  LCK G ++ A  L 
Sbjct: 366 ALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLF 419

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+DK IK  V  Y S+I G+C     + A+ L   M+ +G+ P   +++ ++  LC+N
Sbjct: 420 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 479

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +     L   M + G+  + +T+  L++GFC   +++ A  LF  M          ++
Sbjct: 480 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 539

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +++I GYC    I  A  LY +M+  G+KPD   + +L  GL     V +A +   +++ 
Sbjct: 540 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 599

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +    + ++    + G  + G   E   L+  + +   + D+ ++  ++    K    E 
Sbjct: 600 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 659

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           +  LFR +    + P+ + Y+ MI  L  +  M +A + +  M  +   PN +T  +LI 
Sbjct: 660 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 719

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
              +         L  +M   NV+P+    +  +D  A
Sbjct: 720 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 757



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 203/444 (45%), Gaps = 6/444 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++L+S    D   +T+ I+  C    +  A  L  ++   G +     Y  L+ GLC+  
Sbjct: 211 KMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNM 270

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ +   M N     GV  +   VTY T++ G C+   ++ A  +   M      P
Sbjct: 271 RVQEAVEVKNVMVN----IGVTAD--EVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 324

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +    + +I      +   EA  L  ++ D G+ PNV  +N ++D+LCKN + D+A RL 
Sbjct: 325 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 384

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M   G+ P+  TY  L+   C  G +  A  LF  M   G K TV+ Y+ LINGYCK 
Sbjct: 385 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 444

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             ++ A  L S M+ +G+ P    ++ L  GL     +    +L  EM   G+A + +T+
Sbjct: 445 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 504

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+G CK+  + EA  LF  +       +   +N +I+G C  G +  A +L+  +  
Sbjct: 505 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 564

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L P+  TY  +I GLC    + KA +   D+E +  V N  +   L+ GF R    ++
Sbjct: 565 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 624

Query: 433 VIELLHKMKEINVMPDASIVSIVV 456
              L  +M    V  D    +I+V
Sbjct: 625 TYHLWDEMAVRGVKLDLVSFTIIV 648



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 183/360 (50%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  T + I+  L K      A++L  +M    +  +   YT+ IR +C +++ + A+ L 
Sbjct: 185 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 244

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
           + M  +GV+ + V +NV+M  LCKN ++ EA  + ++M+  GV  D  TY TL+ GFC  
Sbjct: 245 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 304

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             +  A  +   M  +G   +  + S +I+   K + +E A SL  ++   G+ P+V  +
Sbjct: 305 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 364

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N L   L +  + + A +LF EM   G+  +  TY   I  LCK G I +A+ LF  +R 
Sbjct: 365 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 424

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              +  +  YNSLI+G CK G L+ A  L   +    L P   +YS +I GLC +G +  
Sbjct: 425 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 484

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +L  +M E  +  N  TF  LI GF +  +  +   L  KM + NV+P+    +++++
Sbjct: 485 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 544



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 188/377 (49%), Gaps = 7/377 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           +++ S   P+ VTF  +I+G C    I +A  L+ ++   G +PD +TY +L++GLC TS
Sbjct: 526 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 585

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A     ++ N    + V+   N  + T ++ G  +EG   +   L  +M  + +K 
Sbjct: 586 GVSKANEFVADLEN---SYAVL---NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 639

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           ++V++T ++       D  ++  LF EM +QGV+P+ + +  ++D L K   M +A    
Sbjct: 640 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 699

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M+  G  P+  T+  L++  C +G +  A+ L   M +       F+Y+  ++ +   
Sbjct: 700 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 759

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            ++E A  L+S ML +G    +V  N L  GL +  +++ A  L  ++  +G + D  +Y
Sbjct: 760 GDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISY 818

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I  LCK G I +A EL++ +     + D+ AYN  I      G  + AL ++ ++  
Sbjct: 819 STIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 878

Query: 373 GVLVPNVVTYSIMIGGL 389
             + PN  TY  ++ G+
Sbjct: 879 SGVQPNWDTYRALLSGI 895



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 176/354 (49%), Gaps = 7/354 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  ++++    PD  T+ SLI GLC  S + +A      L       + F+
Sbjct: 549 VGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFS 608

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T L+ G  R        +L++EMA    +       + V++T I+    K+   +K+  
Sbjct: 609 LTALLYGFFREGRFTETYHLWDEMAVRGVKL------DLVSFTIIVYAALKQHDKEKSCV 662

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +MK++ +KP+ + YT +I      ++  +A   + +M+  G  PN VT  V+++ LC
Sbjct: 663 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 722

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G +  A  L   M+   V P+ FTYN  LD F   G +  AK+L  +M   G   ++ 
Sbjct: 723 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIV 781

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S++ILI G CK  +I+ A+ L S++   G  PD + ++T+   L ++  + +AF+L++EM
Sbjct: 782 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 841

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
              G+  D   Y  FI     +G   +A+ ++  +     + +   Y +L+ G+
Sbjct: 842 LYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 149/302 (49%)

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +  G+  N  T + I+  L K  +   A  L D M+Q GV  D + Y   +  +C +  +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A+ L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+  D V + TL
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             ++ AYN+LID LCK+ R + A  LF+ +    L PN VTY+I+I  LC  G ++ A  
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           LF  M +  +   V  ++ LI G+ +     +   LL  M +  + P A+  S ++  L 
Sbjct: 418 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 477

Query: 461 KN 462
           +N
Sbjct: 478 RN 479



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 28/224 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD + +T +I  L  E  +++A   + ++ V G  P+  T+T L+N LC++ +   A  L
Sbjct: 674 PDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELL 733

Query: 81  FEEMANGN---GEFGVVC-------------------------EPNTVTYTTIIDGLCKE 112
            +EM  GN    +F   C                           + V++  +I GLCK 
Sbjct: 734 CKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKA 793

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G + +A +L+ ++ +    P+ ++Y+++I   C   D N+A  L+ EM+ +G++P+VV +
Sbjct: 794 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 853

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           N+ +     +G+ D+A  +   MI+ GV+P+  TY  LL G  L
Sbjct: 854 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 897



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 8/122 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     ++ +I +S F+PD ++++++I  LC    I +A  L+ ++   G +PDV  Y
Sbjct: 794 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 853

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              +        +  AL ++  M       GV  +PN  TY  ++ G+     V K + L
Sbjct: 854 NIFIRWCNVHGESDKALGIYTNMIRS----GV--QPNWDTYRALLSGISL--MVSKGQAL 905

Query: 122 LL 123
           LL
Sbjct: 906 LL 907


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 232/449 (51%), Gaps = 9/449 (2%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           L + F PD  T+ +LI+G C   +I +A  L  +++  G  P + T+ +L+  LC  + T
Sbjct: 44  LVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFT 103

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             AL +F +M +      +  +P+   YT +I  LCK   +D A     +M      P+ 
Sbjct: 104 DKALQIFHQMID------MKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDK 157

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           VTYT ++     A  W +  ++F EM+ +G  P +VT+  +++  CK G++D+A  L+  
Sbjct: 158 VTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRR 217

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           +   G  P    Y+TL+DG C   R + A+ELF    + G    V  Y+  I+G CK  +
Sbjct: 218 LKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEM--AAGDVQDVIVYTSFISGLCKAGK 275

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           ++ A +++ +M+  G  PD V +N +   L + ++V  A +L D+               
Sbjct: 276 LDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTV 335

Query: 315 FIDGLCKNGYIVEA-VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
            +DGLCK+  + EA V L   L        +  Y+++IDGLCK+ RL+ A  + + +   
Sbjct: 336 LVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRA 395

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
             VP+VVTY+ +I   C  G++D+AR+LF  M E     +V+ +++LIRG+ R  +  + 
Sbjct: 396 GCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEA 455

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
           I ++ +M    + P+   +S +VD L K 
Sbjct: 456 IAMIEEMAGRGIQPNVVSLSTIVDGLCKE 484



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 205/386 (53%), Gaps = 9/386 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA  +T +I  LC  +++  AA+ F ++   GC PD  TYT LV+ L +         +
Sbjct: 120 PDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQI 179

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FEEM +          P  VTY T+++G CK G +D+A  L+ ++K     P+   Y+++
Sbjct: 180 FEEMLSKGHS------PELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTL 233

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C     +EA+ LF EM    VQ +V+ +   +  LCK GK+DEA  +   MI+ G 
Sbjct: 234 IDGLCKHDRHDEARELF-EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGC 291

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  +YN ++   C   RV+ AKEL        C   V   ++L++G CK++ +E A  
Sbjct: 292 APDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACV 351

Query: 261 LYSEMLSKGIK-PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +   ML  G + P VV ++ +  GL +  +++ A+ +  +M+R G   D  TY   ID  
Sbjct: 352 ILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAF 411

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G + EA ELF  +    C  D+ AYN LI G C++ +++ A+ +   +    + PNV
Sbjct: 412 CKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNV 471

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDM 405
           V+ S ++ GLC + ++++AR L   M
Sbjct: 472 VSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 220/452 (48%), Gaps = 10/452 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++     +LG +  +  TP  VTF SLI+ LC  +   +A  +F ++     +PD F YT
Sbjct: 67  QIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYT 126

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++  LC+ +   +A + FE M          C P+ VTYT ++  L K    ++  ++ 
Sbjct: 127 VVIGHLCKINKLDLAASYFERMVQSG------CLPDKVTYTVLVHSLFKACKWEQGHQIF 180

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  K   P +VTY +V+ G+C A   ++A  L   +   G  P+   ++ ++D LCK+
Sbjct: 181 EEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKH 240

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            + DEA  L ++    G   D   Y + + G C  G+++ AK + V M   GC     SY
Sbjct: 241 DRHDEARELFEMAA--GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSY 298

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +++I   CK+  +  A  L  + + +   P V +   L  GL +  +VE A  + + M  
Sbjct: 299 NVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLE 358

Query: 303 NG-VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            G  A    TY   IDGLCK   + +A  +   +R   C  D+  Y ++ID  CK GRL+
Sbjct: 359 TGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLD 418

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A ELF+ +       +VV Y+I+I G C   ++D+A  +  +M    + PNV++   ++
Sbjct: 419 EARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIV 478

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            G  + +   +   L+ KM     +PD+  VS
Sbjct: 479 DGLCKESRVEEARLLMEKMN-FESLPDSDPVS 509



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 167/330 (50%), Gaps = 2/330 (0%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N  T  S++  F       EA R+F + +    +P+  T+  ++   CK  ++ +A  LL
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M   G+ P   T+ +L+   C     + A ++F  M  M  K   F Y+++I   CK 
Sbjct: 76  GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +++ A S +  M+  G  PD V +  L   LF+  + E+  ++F+EM   G + +  TY
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 195

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T ++G CK G I +A+ L   L+          Y++LIDGLCK  R + A ELF  +  
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAA 254

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
           G  V +V+ Y+  I GLC  G++D+A+ + + M E    P+ ++++++I    + N  S+
Sbjct: 255 GD-VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             EL+ +  E   MP   + +++VD L K+
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKS 343



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 112/230 (48%)

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G +H  ++ + L+  +  +     A  ++ + L    +PD   + TL  G  +  Q+ +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             L  EM+  G+     T+ + I  LC+  +  +A+++FH +  +K + D   Y  +I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCK  +L++A   F  +     +P+ VTY++++  L    + ++   +F +M      P 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           ++T+  ++ G+ +     + + L+ ++K     P  S+ S ++D L K++
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHD 241



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 71/160 (44%)

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G   +T+T  + ++    +G   EA  +F    +     D   Y +LI G CK+ ++ 
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+ L   +    + P +VT+  +I  LC     DKA  +F  M +  V P+   + ++I
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               +IN+         +M +   +PD    +++V  L K
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 46/84 (54%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +  R+ +     D V +  LI+G C  +++ EA A+  ++   G +P+V +
Sbjct: 414 VGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVS 473

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM 84
            +T+V+GLC+ S    A  L E+M
Sbjct: 474 LSTIVDGLCKESRVEEARLLMEKM 497


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 221/436 (50%), Gaps = 10/436 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+  LI   C   ++ EA     +++  G E D+  YT+L+ G C          LF+E
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE 272

Query: 84  -MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
            +  G+        P  +TY T+I G CK G + +A E+   M ++ ++PNV TYT +I 
Sbjct: 273 VLERGDS-------PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G C      EA +L   M+++  +PN VT+N+I+++LCK+G + +A  +++LM +   RP
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           D  TYN LL G C  G ++ A +L   M  +S      V SY+ LI+G CK   +  AL 
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +Y  ++ K    D V  N L     +   V +A +L+ ++  + +  ++ TY   IDG C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G +  A  L   +R+ + +  +  YN L+  LCK G L+ A  LF  +      P+VV
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +++IMI G    G +  A  L + M    + P++ T+  LI  F+++    + I    KM
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625

Query: 441 KEINVMPDASIVSIVV 456
            +    PDA I   V+
Sbjct: 626 VDSGFEPDAHICDSVL 641



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 240/498 (48%), Gaps = 43/498 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M +    F VL  +LK  F  +      L+KGLC      +A +L  ++R     PDVF+
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++ G C       AL L  EM  G+G     C  + VT+  +ID  CK G +D+A  
Sbjct: 180 YNTVIRGFCEGKELEKALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMG 233

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +MK   ++ ++V YTS+IRGFC   + +  K LF E++++G  P  +T+N ++   C
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ EAS + + MI+ GVRP+ +TY  L+DG C  G+   A +L   M     +    
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+I+IN  CK+  +  A+ +   M  +  +PD + +N L  GL     ++ A KL   M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 301 QRNG--VAADTWTYRTFIDGLCKN-----------------------------------G 323
            ++      D  +Y   I GLCK                                    G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + +A+EL+  +   K   +   Y ++IDG CK+G L +A  L   +    L P+V  Y+
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            ++  LC +G +D+A  LF +M+ +   P+V++F+++I G ++  +      LL  M   
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593

Query: 444 NVMPDASIVSIVVDLLAK 461
            + PD    S +++   K
Sbjct: 594 GLSPDLFTYSKLINRFLK 611



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 204/439 (46%), Gaps = 44/439 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G  +   +L+   +P A+T+ +LI+G C   ++ EA+ +F  +   G  P+V+TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GLC    T  AL L   M   + E      PN VTY  II+ LCK+G V  A E+
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEE------PNAVTYNIIINKLCKDGLVADAVEI 374

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDEL 179
           +  MK +  +P+ +TY  ++ G C   D +EA +L   M+       P+V+++N ++  L
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434

Query: 180 CKNGKMDEASRLLDLMIQH---GVR--------------------------------PDA 204
           CK  ++ +A  + DL+++    G R                                 ++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  ++DGFC TG +N AK L   M     + +VF Y+ L++  CK   ++ A  L+ E
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M      PDVV  N +  G  +   ++ A  L   M R G++ D +TY   I+   K GY
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + EA+  F  +     E D    +S++      G  +   EL + L    +V +      
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT 674

Query: 385 MIGGLCN-DGQMDKARDLF 402
           ++  +CN    MD A+ L 
Sbjct: 675 VMDYMCNSSANMDLAKRLL 693



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 146/290 (50%)

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N +M +L ++   + A      M++     +  + + LL+ +    +   A  +   M  
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G    V++++IL+ G C+N E   A+SL  EM    + PDV  +NT+  G  E  ++E+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A +L +EM+ +G +    T+   ID  CK G + EA+     ++ +  E D+  Y SLI 
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G C  G L+    LF  +      P  +TY+ +I G C  GQ+ +A ++F  M E  V P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           NV T+  LI G   + +  + ++LL+ M E +  P+A   +I+++ L K+
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 226/441 (51%), Gaps = 7/441 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+  LI  LC    I +A  LF K+R  G +  V+ Y +L+NG C+      A  L
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M            P   +Y+ +I GLC+ G +    EL  +M ++ I  N  T+T++
Sbjct: 431 LSGMVKEG------LTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 484

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC  K  +EA RLF +M+D  V PN VTFNV+++  C  G + +A +L D M++ G+
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD +TY +L+ G CLT  V+ A E    +E+       FS + L+ G+ +         
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 604

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM  +G+K D+V    +     + H  E++  LF EM+  GV  D   Y   ID L 
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   +++A+  +  + +     +   +  LI+ LCKSG L  A  L + +  G ++PN  
Sbjct: 665 KEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+  +     +G M+KA+DL   M +  +  ++++F++LI+G  +  +  + I+L+ K+
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKI 783

Query: 441 KEINVMPDASIVSIVVDLLAK 461
            E    PD    S ++  L K
Sbjct: 784 TESGFSPDCISYSTIIHELCK 804



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 232/465 (49%), Gaps = 8/465 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           + G VV  R+        AV +  L+ GLC   R+ EA  +   +   G   D  TY TL
Sbjct: 217 ARGLVV--RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V G CR     +AL +  +M       G V  P+    + +ID L K+  V++A  L  +
Sbjct: 275 VYGFCRMEELEMALRITHDMI----RLGFV--PSEANCSFMIDELRKKELVEEAFSLACK 328

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           + D  + PNV  Y ++I   C  + +++A RLF EM  +G++PN VT+ +++  LCK G 
Sbjct: 329 LGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +++A  L D M   G++   + YN+L++G+C  G ++ A+ L   M   G   T  SYS 
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI G C+N ++   + L+ EM  +GI  +      L  G  +  +++ A +LFD+M  + 
Sbjct: 449 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           V  +  T+   I+G C  G I +A +L+  +  +  + D   Y SLI GLC +  +  A 
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 568

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E    L     V N  + + ++ G   +G+  +   L+ +M    V  ++++F +++   
Sbjct: 569 EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 628

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           ++ ++  K   L  +MKE  V PD    + ++D L+K E  + +L
Sbjct: 629 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 213/458 (46%), Gaps = 12/458 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++H  + LG      F P     + +I  L  +  + EA +L  KL   G  P+VF Y 
Sbjct: 289 RITHDMIRLG------FVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++ LC+      A  LF+EMA G G      EPN VTY  +I  LCK G ++ A  L 
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+DK IK  V  Y S+I G+C     + A+ L   M+ +G+ P   +++ ++  LC+N
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +     L   M + G+  + +T+  L++GFC   +++ A  LF  M          ++
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +++I GYC    I  A  LY +M+  G+KPD   + +L  GL     V +A +   +++ 
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +    + ++    + G  + G   E   L+  + +   + D+ ++  ++    K    E 
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           +  LFR +    + P+ + Y+ MI  L  +  M +A + +  M  +   PN +T  +LI 
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 696

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
              +         L  +M   NV+P+    +  +D  A
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 203/444 (45%), Gaps = 6/444 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++L+S    D   +T+ I+  C    +  A  L  ++   G +     Y  L+ GLC+  
Sbjct: 188 KMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNM 247

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ +   M N     GV  +   VTY T++ G C+   ++ A  +   M      P
Sbjct: 248 RVQEAVEVKNVMVN----IGVTAD--EVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +    + +I      +   EA  L  ++ D G+ PNV  +N ++D+LCKN + D+A RL 
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M   G+ P+  TY  L+   C  G +  A  LF  M   G K TV+ Y+ LINGYCK 
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             ++ A  L S M+ +G+ P    ++ L  GL     +    +L  EM   G+A + +T+
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+G CK+  + EA  LF  +       +   +N +I+G C  G +  A +L+  +  
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L P+  TY  +I GLC    + KA +   D+E +  V N  +   L+ GF R    ++
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 601

Query: 433 VIELLHKMKEINVMPDASIVSIVV 456
              L  +M    V  D    +I+V
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIV 625



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 183/360 (50%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  T + I+  L K      A++L  +M    +  +   YT+ IR +C +++ + A+ L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
           + M  +GV+ + V +NV+M  LCKN ++ EA  + ++M+  GV  D  TY TL+ GFC  
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             +  A  +   M  +G   +  + S +I+   K + +E A SL  ++   G+ P+V  +
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N L   L +  + + A +LF EM   G+  +  TY   I  LCK G I +A+ LF  +R 
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              +  +  YNSLI+G CK G L+ A  L   +    L P   +YS +I GLC +G +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +L  +M E  +  N  TF  LI GF +  +  +   L  KM + NV+P+    +++++
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 188/377 (49%), Gaps = 7/377 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           +++ S   P+ VTF  +I+G C    I +A  L+ ++   G +PD +TY +L++GLC TS
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A     ++ N    + V+   N  + T ++ G  +EG   +   L  +M  + +K 
Sbjct: 563 GVSKANEFVADLEN---SYAVL---NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           ++V++T ++       D  ++  LF EM +QGV+P+ + +  ++D L K   M +A    
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M+  G  P+  T+  L++  C +G +  A+ L   M +       F+Y+  ++ +   
Sbjct: 677 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 736

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            ++E A  L+S ML +G    +V  N L  GL +  +++ A  L  ++  +G + D  +Y
Sbjct: 737 GDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISY 795

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I  LCK G I +A EL++ +     + D+ AYN  I      G  + AL ++ ++  
Sbjct: 796 STIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 855

Query: 373 GVLVPNVVTYSIMIGGL 389
             + PN  TY  ++ G+
Sbjct: 856 SGVQPNWDTYRALLSGI 872



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 226/482 (46%), Gaps = 27/482 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  ++++    PD  T+ SLI GLC  S + +A      L       + F+
Sbjct: 526 VGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFS 585

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T L+ G  R        +L++EMA    +       + V++T I+    K+   +K+  
Sbjct: 586 LTALLYGFFREGRFTETYHLWDEMAVRGVKL------DLVSFTIIVYAALKQHDKEKSCV 639

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +MK++ +KP+ + YT +I      ++  +A   + +M+  G  PN VT  V+++ LC
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 699

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G +  A  L   M+   V P+ FTYN  LD F   G +  AK+L  +M   G   ++ 
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIV 758

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S++ILI G CK  +I+ A+ L S++   G  PD + ++T+   L ++  + +AF+L++EM
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D   Y  FI     +G   +A+ ++  +     + +   Y +L+ G+  S  L
Sbjct: 819 LYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI--SLML 876

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA--RDLFLDMEENAVVPNVITFD 418
                 FR     +    +  Y +M      D   +K+  R  F+D  ++  +  ++ FD
Sbjct: 877 HYDFSCFRGTKQYI---QISVYELM------DSTHNKSHRRIWFVDDHKSGEI--ILEFD 925

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
             +  +  I+  S V     K+K+++  P  S  +     +  +   L  +P   +HE+ 
Sbjct: 926 GRLNKWGVISFRSDV-----KVKKLSPGPQVSFPTHQSGYMPTSPSLLLPVPWIMIHERG 980

Query: 479 EE 480
           +E
Sbjct: 981 KE 982



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 149/302 (49%)

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +  G+  N  T + I+  L K  +   A  L D M+Q GV  D + Y   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A+ L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+  D V + TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             ++ AYN+LID LCK+ R + A  LF+ +    L PN VTY+I+I  LC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           LF  M +  +   V  ++ LI G+ +     +   LL  M +  + P A+  S ++  L 
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 461 KN 462
           +N
Sbjct: 455 RN 456


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 233/466 (50%), Gaps = 18/466 (3%)

Query: 4   VSHGFVVLGRI-----------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF 52
           ++H    LGR+           L+ C  PD ++++++I G C    +     L  ++++ 
Sbjct: 259 ITHSLCQLGRVVEAHQLLLQMELRGCI-PDVISYSTVINGYCQVGELQRVLKLIEEMQIK 317

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G +P+ +TY  ++  LC+T     A  +  EM +     G+   P+ V YTT+IDG CK 
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE----GIA--PDGVIYTTLIDGFCKL 371

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G V  A  L  +M+ + I P+ +TYT+VI G C      EA +LF EM+ + ++P+ VT+
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
             ++D  CK GKM EA  L + M+Q G+ P+  TY  L DG C  G V+ A EL   M  
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G +  +++Y+ L+NG CK   I+ A+ L  +M   G  PD V + TL     +  ++ R
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A +L  +M    +     T+   ++G C +G + +  +L   +       +   YNSLI 
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 611

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
             C    +    E++R +    +VP+  TY+I+I G C    M +A  L  DM       
Sbjct: 612 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 671

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            V +++ LI+GF +  +  +  EL  +M+   ++ D  I +I  D+
Sbjct: 672 TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADI 717



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 218/415 (52%), Gaps = 6/415 (1%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A  +F +    G   +  +Y  + + LC+    + A  L  +M          C P+ ++
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRG------CIPDVIS 290

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y+T+I+G C+ G + +  +L+ +M+ K +KPN  TY  VI   C      EA+R+  EM+
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI 350

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G+ P+ V +  ++D  CK G +  A RL D M +  + PD  TY  ++ G C TGRV 
Sbjct: 351 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVM 410

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A +LF  M     +    +Y+ LI+GYCK  +++ A SL+++ML  G+ P++V +  L 
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 470

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL +  +V+ A +L  EM R G+  + +TY + ++GLCK G I +AV+L   + +    
Sbjct: 471 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D   Y +L+D  CKS  +  A EL R +    L P VVT+++++ G C  G ++    L
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
              M E  ++PN  T++ LI+ +   N      E+   M    V+PD +  +I++
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 645



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 214/402 (53%), Gaps = 6/402 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           +  ++  +   LC   R++EA  L  ++ + GC PDV +Y+T++NG C+       L L 
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM           +PN  TY  +I  LCK G V +A+ +L +M  + I P+ V YT++I
Sbjct: 312 EEMQIKG------LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLI 365

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GFC   + + A RLF EM  + + P+ +T+  ++  LC+ G++ EA +L   M+   + 
Sbjct: 366 DGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 425

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY  L+DG+C  G++  A  L   M  MG    + +Y+ L +G CK  E++ A  L
Sbjct: 426 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 485

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM  KG++ ++  +N+L  GL +   +++A KL  +M+  G   D  TY T +D  CK
Sbjct: 486 LHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCK 545

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           +  +V A EL   +   + +  +  +N L++G C SG LE   +L + +    ++PN  T
Sbjct: 546 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 605

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           Y+ +I   C    M    +++  M    VVP+  T+++LI+G
Sbjct: 606 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 647



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 210/418 (50%), Gaps = 12/418 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V+    VL  ++     PD V +T+LI G C    +  A  LF +++     PD  TY
Sbjct: 337 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITY 396

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC---EPNTVTYTTIIDGLCKEGFVDKA 118
           T ++ GLC+T   + A  LF EM         VC   EP+ VTYT +IDG CKEG + +A
Sbjct: 397 TAVICGLCQTGRVMEADKLFHEM---------VCKRLEPDEVTYTALIDGYCKEGKMKEA 447

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             L  QM    + PN+VTYT++  G C   + + A  L  EM  +G++ N+ T+N +++ 
Sbjct: 448 FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNG 507

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK G +D+A +L+  M   G  PDA TY TL+D +C +  +  A EL   M     + T
Sbjct: 508 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 567

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V ++++L+NG+C +  +E    L   ML KGI P+   +N+L       + +    +++ 
Sbjct: 568 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 627

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M   GV  D  TY   I G CK   + EA  L   +        + +YN+LI G  K  
Sbjct: 628 GMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRK 687

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +   A ELF  +    LV +   Y+I      ++G+M+   +L  +  E  +V ++ T
Sbjct: 688 KFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 745



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 187/366 (51%), Gaps = 6/366 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G VS  + +   + K   +PD +T+T++I GLC   R+MEA  LF ++     EPD  T
Sbjct: 371 LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 430

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G C+      A +L  +M     + G+   PN VTYT + DGLCK G VD A E
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQML----QMGLT--PNIVTYTALADGLCKCGEVDTANE 484

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  K ++ N+ TY S++ G C A + ++A +L  +M   G  P+ VT+  +MD  C
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 544

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+ +M  A  LL  M+   ++P   T+N L++GFC++G +   ++L   M   G      
Sbjct: 545 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 604

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI  YC    +     +Y  M +KG+ PD   +N L  G  +   ++ A+ L  +M
Sbjct: 605 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 664

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G      +Y   I G  K    +EA ELF  +R      D   YN   D     G++
Sbjct: 665 VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKM 724

Query: 361 EIALEL 366
           E+ LEL
Sbjct: 725 ELTLEL 730



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 193/356 (54%), Gaps = 1/356 (0%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE-AKRLFIEMMDQGVQP 167
           L + G +D+A++L  +M +  +  +V +    I       D  + A ++F+E  + GV  
Sbjct: 192 LVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCW 251

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N  ++N+I   LC+ G++ EA +LL  M   G  PD  +Y+T+++G+C  G +    +L 
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M+  G K   ++Y+ +I   CK  ++  A  +  EM+S+GI PD VI+ TL  G  ++
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             V  A++LFDEMQ+  ++ D  TY   I GLC+ G ++EA +LFH +   + E D   Y
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +LIDG CK G+++ A  L   +    L PN+VTY+ +  GLC  G++D A +L  +M  
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             +  N+ T++ L+ G  +     + ++L+  M+     PDA   + ++D   K+ 
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 547



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 167/325 (51%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N  +Y  +    C      EA +L ++M  +G  P+V++++ +++  C+ G++    +L+
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M   G++P+ +TYN ++   C TG+V  A+ +   M S G       Y+ LI+G+CK 
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +  A  L+ EM  + I PD + +  +  GL +  +V  A KLF EM    +  D  TY
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              IDG CK G + EA  L + +  +    +I  Y +L DGLCK G ++ A EL   +  
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L  N+ TY+ ++ GLC  G +D+A  L  DME     P+ +T+  L+  + +  E  +
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551

Query: 433 VIELLHKMKEINVMPDASIVSIVVD 457
             ELL +M +  + P     +++++
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMN 576



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 159/313 (50%), Gaps = 6/313 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F +  ++L+   TP+ VT+T+L  GLC    +  A  L  ++   G E +++TY
Sbjct: 442 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 501

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +LVNGLC+  +   A+ L ++M            P+ VTYTT++D  CK   + +A EL
Sbjct: 502 NSLVNGLCKAGNIDQAVKLMKDMEVAG------FHPDAVTYTTLMDAYCKSREMVRAHEL 555

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM D+ ++P VVT+  ++ GFC +    + ++L   M+++G+ PN  T+N ++ + C 
Sbjct: 556 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 615

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              M   + +   M   GV PD  TYN L+ G C    +  A  L   M   G   TV S
Sbjct: 616 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 675

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G+ K K+   A  L+ +M  +G+  D  I+N      ++  ++E   +L DE  
Sbjct: 676 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAI 735

Query: 302 RNGVAADTWTYRT 314
              +  D  T  T
Sbjct: 736 EKCLVGDIQTKNT 748



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 36/225 (16%)

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM--------------------------- 300
           K    D  + +  F  L E   ++ A KLFD+M                           
Sbjct: 176 KDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIK 235

Query: 301 ---------QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
                       GV  +T +Y      LC+ G +VEA +L   + +  C  D+ +Y+++I
Sbjct: 236 IALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVI 295

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           +G C+ G L+  L+L   +    L PN  TY+ +I  LC  G++ +A  +  +M    + 
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           P+ + +  LI GF ++   S    L  +M++  + PD    + V+
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 400


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 224/433 (51%), Gaps = 7/433 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT++ LI   C   ++  A     K+ + G +  V+ Y +L+NG C+  +   A++ F+E
Sbjct: 402 VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDE 461

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M +         +P  V+YT++I G C +G + +A  L  +M  K I PN  T+T++I  
Sbjct: 462 MIDKG------LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISA 515

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
              A    +A RLF EM++Q + PN VT+NV+++  CK G   +A  LL+ M+Q G+ PD
Sbjct: 516 LFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPD 575

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
            +TY  L+   C TGRV  AK+    +     K     YS L++GYCK   +  AL +  
Sbjct: 576 TYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCR 635

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM+ +G+  D+V +  L  G  +       F L   M    +  D   Y + IDG  K G
Sbjct: 636 EMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAG 695

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + +A  ++  +    C  +I  Y +LI+ LCK+G ++ A  L++ +      PN VTY 
Sbjct: 696 SVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYC 755

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
             +  L  +G M+KA  L  DM +  ++ N +++++L+RGF ++    +  +LL +M + 
Sbjct: 756 CFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDN 814

Query: 444 NVMPDASIVSIVV 456
            + PD    S ++
Sbjct: 815 AIFPDCITYSTII 827



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 222/475 (46%), Gaps = 41/475 (8%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + V +  LI GLC   R+ EA  +   L   G      TY TLV GLC+     V   + 
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVM 319

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM     E G V  P     +++++GL ++G V  A +L+ ++K     P++  Y ++I
Sbjct: 320 DEMI----ELGFV--PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALI 373

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C    ++EA+ LF EM ++G+  N VT+++++D  C+ GK+D A   L  MI  G++
Sbjct: 374 NSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIK 433

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
              + YN+L++G C  G ++ A   F  M   G K TV SY+ LI+GYC   ++  A  L
Sbjct: 434 ITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRL 493

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ-------------------- 301
           Y EM  KGI P+     TL   LF  +++  AF+LFDEM                     
Sbjct: 494 YHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCK 553

Query: 302 ---------------RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                          + G+  DT+TYR  I  LC  G + EA +    L     + +   
Sbjct: 554 EGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMC 613

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y++L+ G CK GRL  AL + R +    +  ++V Y+++I G   +        L  +M 
Sbjct: 614 YSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMH 673

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  + P+ + +  +I G+ +     K   +   M +    P+    + +++ L K
Sbjct: 674 DQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCK 728



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 212/455 (46%), Gaps = 6/455 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G  V+  +++  F P     +SL++GL  + ++++A  L  +++  G  P +F Y  L+N
Sbjct: 315 GAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALIN 374

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            LC+      A  LF+EM    GE G+    N VTY+ +ID  C+ G +D A   L +M 
Sbjct: 375 SLCKDGKFDEAELLFKEM----GEKGLC--ANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
              IK  V  Y S+I G C   + + A   F EM+D+G++P VV++  ++   C  GK+ 
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA RL   M   G+ P+ +T+ TL+       R+  A  LF  M          +Y+++I
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMI 548

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G+CK      A  L ++M+ KG+ PD   +  L   L    +V  A K  D++ R    
Sbjct: 549 EGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFK 608

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +   Y   + G CK G + +A+ +   +     + D+  Y  LIDG  K         L
Sbjct: 609 LNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGL 668

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            +++    L P+ V Y+ MI G    G + KA  ++  M +    PN++T+  LI    +
Sbjct: 669 LKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCK 728

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                K   L  +M   N  P+       +D LA+
Sbjct: 729 AGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAR 763



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 218/455 (47%), Gaps = 8/455 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV    V+ G IL     PD   + ++I+  C      +A  +  ++     + +V  Y 
Sbjct: 208 RVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRME--SSDLNVVVYN 265

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++GLC+      A+    E+ NG  + G+    + VTY T++ GLCK    +    ++
Sbjct: 266 VLIHGLCKNKRVWEAV----EIKNGLIQKGLT--ASEVTYCTLVLGLCKVQEFEVGAGVM 319

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +    P     +S++ G        +A  L   +   G  P++  +N +++ LCK+
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK DEA  L   M + G+  +  TY+ L+D FC  G+++ A      M   G K TV+ Y
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LING+CK   +  A+S + EM+ KG+KP VV + +L  G     ++  AF+L+ EM  
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+A +T+T+ T I  L +   + +A  LF  +       +   YN +I+G CK G    
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A EL   +    LVP+  TY  +I  LC+ G++ +A+    D+       N + +  L+ 
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLH 619

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           G+ +       + +  +M +  V  D    ++++D
Sbjct: 620 GYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLID 654



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 213/461 (46%), Gaps = 42/461 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +S        ++     P  V++TSLI G C + ++ EA  L+ ++   G  P+ +T
Sbjct: 449 LGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYT 508

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +TTL++ L R +    A  LF+EM   N        PN VTY  +I+G CKEG   KA E
Sbjct: 509 FTTLISALFRANRMTDAFRLFDEMLEQN------MMPNEVTYNVMIEGHCKEGNTVKAFE 562

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL QM  K + P+  TY  +I   C      EAK+   ++  +  + N + ++ ++   C
Sbjct: 563 LLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYC 622

Query: 181 KNGKMDEASRLLDLMIQHGV-----------------------------------RPDAF 205
           K G++ +A  +   M++ GV                                   RPD  
Sbjct: 623 KEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKV 682

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            Y +++DG+   G V  A  ++  M   GC   + +Y+ LIN  CK   ++ A  L+ EM
Sbjct: 683 IYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEM 742

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L     P+ V +      L     +E+A +L ++M + G+ A+T +Y   + G CK G +
Sbjct: 743 LVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRV 801

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA +L   +       D   Y+++I   C+ G L+ A+E + ++    L P+ + Y+ +
Sbjct: 802 EEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFL 861

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           I G C  G++ KA +L  DM    V PN  T   L  G  R
Sbjct: 862 IYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASR 902



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 4/365 (1%)

Query: 95  CE--PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
           CE  P   T   +++GL K   VD    L  ++    I+P++  Y +VIR FC  K++ +
Sbjct: 187 CELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAK 246

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           AK +   M  +    NVV +NV++  LCKN ++ EA  + + +IQ G+     TY TL+ 
Sbjct: 247 AKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVL 304

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C          +   M  +G   T  + S L+ G  +  ++  A  L + +   G  P
Sbjct: 305 GLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMP 364

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
            + ++N L   L +  + + A  LF EM   G+ A+  TY   ID  C+ G +  A+   
Sbjct: 365 SLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFL 424

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             + +   +  +  YNSLI+G CK G L  A+  F  +    L P VV+Y+ +I G CN 
Sbjct: 425 GKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G++ +A  L+ +M    + PN  TF  LI    R N  +    L  +M E N+MP+    
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544

Query: 453 SIVVD 457
           +++++
Sbjct: 545 NVMIE 549



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 211/462 (45%), Gaps = 30/462 (6%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F  L    + C    ++ F  LI+    E R+ ++  +F  +R     P V T   ++NG
Sbjct: 143 FEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNG 202

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGV---------VCE------------------PNTV 100
           L +     + L LF E+ +      +          CE                   N V
Sbjct: 203 LAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVV 262

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            Y  +I GLCK   V +A E+   +  K +  + VTY +++ G C  +++     +  EM
Sbjct: 263 VYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEM 322

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           ++ G  P     + +++ L + GK+ +A  L++ + + G  P  F YN L++  C  G+ 
Sbjct: 323 IELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKF 382

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A+ LF  M   G      +YSILI+ +C+  +++ A+    +M+  GIK  V  +N+L
Sbjct: 383 DEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G  ++  +  A   FDEM   G+     +Y + I G C  G + EA  L+H +     
Sbjct: 443 INGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGI 502

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             +   + +LI  L ++ R+  A  LF  +    ++PN VTY++MI G C +G   KA +
Sbjct: 503 APNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFE 562

Query: 401 LFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIELLHK 439
           L   M +  +VP+  T+  LI       R+ E  K I+ LH+
Sbjct: 563 LLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR 604



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 148/308 (48%), Gaps = 2/308 (0%)

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I+ +   K   ++  +F  M    + P V T   +++ L K  ++D    L   ++  G
Sbjct: 164 LIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMG 223

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           +RPD + Y  ++  FC       AKE+   MES      V  Y++LI+G CKNK +  A+
Sbjct: 224 IRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAV 281

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + + ++ KG+    V + TL +GL ++ + E    + DEM   G         + ++GL
Sbjct: 282 EIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGL 341

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G +V+A +L + ++ +     +  YN+LI+ LCK G+ + A  LF+ +    L  N 
Sbjct: 342 RRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAND 401

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTYSI+I   C  G++D A      M    +   V  ++ LI G  ++   S  +    +
Sbjct: 402 VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDE 461

Query: 440 MKEINVMP 447
           M +  + P
Sbjct: 462 MIDKGLKP 469



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 134/296 (45%), Gaps = 21/296 (7%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLD-LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           + ++F +++  L        AS LL  L+++ G+ P    +  LLD F         K  
Sbjct: 104 STMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPRE-VFEALLDCF--------EKCD 154

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           F+S  S+G       + +LI  Y + K +  ++ ++  M    + P V     +  GL +
Sbjct: 155 FIS--SLG-------FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAK 205

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
           I +V+    LF E+   G+  D + Y   I   C+     +A E+    R+   + ++  
Sbjct: 206 IRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQ--RMESSDLNVVV 263

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           YN LI GLCK+ R+  A+E+   L    L  + VTY  ++ GLC   + +    +  +M 
Sbjct: 264 YNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMI 323

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           E   VP       L+ G  R  +     +L++++K++  MP   + + +++ L K+
Sbjct: 324 ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 250/494 (50%), Gaps = 33/494 (6%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G +L +    + V   +  + LC   +  +A  L  ++   G  PD  TY+ ++  LC
Sbjct: 240 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 299

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
             +    A  LF+EM       GV   P+  TYT +ID  CK G +++A+ L  +M+   
Sbjct: 300 HATKVEKAFLLFQEMKM----VGVT--PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P VVTYT++I  +  AK   +A  +F  M+D G +PN VT+  ++D LCK G + +A 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 190 RLLDLMI----------------QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            +   +I                +H + P+  TY  L+DG C   +V+HA EL  +M S 
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GC+     Y  LI+G+CK  +I+ A  ++ +M   G  P V  + +L   +F+  +++ A
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            K+  +M ++    +  TY   IDGLC+ G   +A++L   +    C  ++  Y +LIDG
Sbjct: 534 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 593

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           L K+G+++++L+LF  +      PN VTY ++I  LC  G +DKAR L  +M++      
Sbjct: 594 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 653

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN---EISLNSLP 470
           +  +   I+GF +    S  + +L +M+    +P A +  +++D  +K    EI++    
Sbjct: 654 LQGYRCAIQGFSKSFIAS--LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAME--- 708

Query: 471 SFTVHEQQEEVDES 484
              +H++  EV  S
Sbjct: 709 ---LHKEMMEVPSS 719



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 243/525 (46%), Gaps = 94/525 (17%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    F ++  +++  F PD  T++ +I  LC  +++ +A  LF ++++ G  PDV+T
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++  C+      A  LFEEM +      V C P  VTYT +I    K   V +A +
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRS------VGCSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---------------- 164
           +  +M D   +PN VTY +++ G C A + ++A  ++ +++                   
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + PNVVT+  ++D LCK  K+D A  LLD M+  G  P+   Y+ L+DGFC  G+++ A+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 225 ELFVSMESMG-----------------------------------CKHTVFSYSILINGY 249
           E+F+ M   G                                   C   V +Y+ +I+G 
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+  E E AL L S M  KG  P+VV +  L  GL +  +++ +  LF +M R G + + 
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619

Query: 310 WTYRTFIDGLCKNGYIVEAVELF---------HTLRILKCEFD----------------- 343
            TYR  I+ LC  G + +A  L            L+  +C                    
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679

Query: 344 -------IRAYNSLIDGLCKSGRLEIALELFRSL---PCGVLVPNVVTYSIMIGGLCNDG 393
                     Y  LID   K+GRLEIA+EL + +   P  V   N + Y+ +I  LC   
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM-YASLIQALCLAS 738

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           Q+++A  L+ +M     VP +  F  LI+G + + +  + ++L +
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 229/468 (48%), Gaps = 31/468 (6%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC  P+ VT+ +L+ G   + ++     +   +   GC P+   + +LV+  C       
Sbjct: 137 SCI-PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 195

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE------GFVDKAKELLLQMKDKNI 130
           A  L   M          C P  V Y   I  +C +        +D A+++  +M   N 
Sbjct: 196 AYKLLNRMTTCG------CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANC 249

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
             N V   +  R  C    +++A +L  EMM +G  P+  T++ ++  LC   K+++A  
Sbjct: 250 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 309

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M   GV PD +TY  L+D FC  G +  A+ LF  M S+GC  TV +Y+ LI+ Y 
Sbjct: 310 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM---------- 300
           K K++  A  ++  M+  G +P+ V +  L  GL +   + +AF+++ ++          
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429

Query: 301 ------QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                  R+ +A +  TY   +DGLCK   +  A EL   +    CE +   Y++LIDG 
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489

Query: 355 CKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           CK+G+++ A E+F  +  CG L P+V TY+ +I  +  DG++D A  +   M +++  PN
Sbjct: 490 CKAGKIDSAQEVFLQMTKCGYL-PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           V+T+  +I G  RI E  K ++LL  M+E    P+    + ++D L K
Sbjct: 549 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGK 596



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 213/458 (46%), Gaps = 22/458 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+   F SL+   C E     A  L  ++   GC P    Y   +  +C     + + +L
Sbjct: 175 PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC-GQEKLPSPDL 233

Query: 81  FEEMANGNGE-FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            +      GE     C  N V        LC  G  DKA +L+ +M  K   P+  TY+ 
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           VI   C+A    +A  LF EM   GV P+V T+ +++D  CK G +++A  L + M   G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P   TY  L+  +    +V  A ++F  M   GC+    +Y  L++G CK   I  A 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 260 SLYSEMLSKG----------------IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +Y++++                   + P+VV +  L  GL + H+V+ A +L D M  +
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLE 361
           G   +   Y   IDG CK G I  A E+F  L++ KC +   +  Y SLID + K GRL+
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRMFKDGRLD 531

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A+++   +      PNVVTY+ MI GLC  G+ +KA  L   MEE    PNV+T+  LI
Sbjct: 532 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            G  +  +    ++L  +M      P+     ++++ L
Sbjct: 592 DGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 213/501 (42%), Gaps = 66/501 (13%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + P  VT+ +L++ L +  ++     +  ++   G   D FT     + LC+      AL
Sbjct: 36  YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL 95

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++ E       +F +    +TV  T +I GL +  + D+A   L +M+  +  PNVVTY 
Sbjct: 96  DMIER-----EDFKL----DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYR 146

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +++ GF   K     KR+   MM +G  PN   FN ++   C       A +LL+ M   
Sbjct: 147 TLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTC 206

Query: 199 GVRPDAFTYNTLLDGFCLTGR------VNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           G  P    YN  +   C   +      ++ A++++  M +  C     + +      C  
Sbjct: 207 GCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV 266

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            + + A  L  EM+ KG  PD   ++ +   L    +VE+AF LF EM+  GV  D +TY
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI--------------------- 351
              ID  CK G I +A  LF  +R + C   +  Y +LI                     
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 352 --------------DGLCKSGRLEIALELFRSL-------------PC---GVLVPNVVT 381
                         DGLCK+G +  A E++  L             PC     L PNVVT
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y  ++ GLC   ++D A +L   M  +   PN I +D LI GF +  +     E+  +M 
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 442 EINVMPDASIVSIVVDLLAKN 462
           +   +P     + ++D + K+
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKD 527



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 155/393 (39%), Gaps = 81/393 (20%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           +KD   +P+ VTY ++++    A   +   R+  EM + G   +  T       LCK G+
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 185 --------------------------------MDEASRLLDLMIQHGVRPDAFTYNTLLD 212
                                            DEA   L  M  +   P+  TY TLL 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           GF    ++   K +   M + GC      ++ L++ YC  K+   A  L + M + G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 273 DVVIHNTLFVG------------------------------------------LFEIHQV 290
             V++N +F+G                                          L  + + 
Sbjct: 211 GYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           ++AF+L  EM R G   DT TY   I  LC    + +A  LF  ++++    D+  Y  L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 351 IDGLCKSGRLEIALELF---RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           ID  CK+G +E A  LF   RS+ C    P VVTY+ +I       Q+ +A D+F  M +
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCS---PTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
               PN +T+  L+ G  +    SK  E+  K+
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/375 (20%), Positives = 142/375 (37%), Gaps = 73/375 (19%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           + D G +P+ VT+N ++  L   G++D   R+   M + G   D FT        C  GR
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 220 VNHAKELF----VSMESMGCKH----------------------------TVFSYSILIN 247
              A ++       ++++ C H                             V +Y  L++
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+ K K++     + + M+++G  P+  + N+L            A+KL + M   G   
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 308 DTWTYRTFIDGLCKN-----------------------------------------GYIV 326
               Y  FI  +C                                           G   
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A +L   +       D   Y+ +I  LC + ++E A  LF+ +    + P+V TY+I+I
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
              C  G +++A+ LF +M      P V+T+  LI  +++  +  +  ++ H+M +    
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390

Query: 447 PDASIVSIVVDLLAK 461
           P+      +VD L K
Sbjct: 391 PNDVTYGALVDGLCK 405



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/335 (22%), Positives = 111/335 (33%), Gaps = 50/335 (14%)

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           V T    +   C +   D    L D     G RP   TYN L+      G+V+    +  
Sbjct: 9   VATLRASLRRTCSHAAGDSEDPLKDF----GYRPSKVTYNALVQVLSSAGQVDLGFRVQK 64

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   G     F+     +  CK      AL +      +  K D V+   +  GL E  
Sbjct: 65  EMSESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEAS 121

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
             + A      M+ N    +  TYRT + G  K   +     + + +    C  +   +N
Sbjct: 122 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 181

Query: 349 SLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCND--------------- 392
           SL+   C       A +L  R   CG   P  V Y+I IG +C                 
Sbjct: 182 SLVHSYCNEKDYAYAYKLLNRMTTCGC-PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 240

Query: 393 --------------------------GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
                                     G+ DKA  L  +M     VP+  T+  +I     
Sbjct: 241 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 300

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +  K   L  +MK + V PD    +I++D   K
Sbjct: 301 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 7/213 (3%)

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G +P  V +N L   L    QV+  F++  EM  +G   D +T   F   LCK G   +A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           +++         + D      +I GL ++   + A+     + C   +PNVVTY  ++ G
Sbjct: 95  LDMIEREDF---KLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
                Q+   + +   M      PN   F+ L+  +    + +   +LL++M      P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
             + +I +  +   E     LPS  + +  E++
Sbjct: 212 YVVYNIFIGSICGQE----KLPSPDLLDLAEKI 240


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 228/462 (49%), Gaps = 4/462 (0%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           + + G+ +   ++K     ++    SL+ GL  E        L  K+     +P+V T+ 
Sbjct: 285 KTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFG 344

Query: 63  TLVNGLCRTSHTIVALNLFEEMANG--NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            L+N +C+      AL + E+M+ G  +G   V  EP+ V Y T+IDGLCK G   +   
Sbjct: 345 ILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLG 404

Query: 121 LLLQMK-DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L+ +M+  K   P+ +TY  +I GFC A +  + K LF EM  +GV PNVVT N ++  +
Sbjct: 405 LMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGM 464

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+ G++  A        + G++ DA TY  L++ FC       A ELF  M   GC    
Sbjct: 465 CRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDA 524

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y  LI+G+ +   +  A  + +E+   GI+PD V +NTL  G    ++  R F++  E
Sbjct: 525 IVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKE 584

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+  G+  DT TY T I    KNG +  A ++   +        +  Y ++I+  C +G 
Sbjct: 585 MEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGN 644

Query: 360 LEIALELFRSLPCGVLVP-NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
              A+E+F+ +     VP N V Y+I+I  LC + ++  A  L  DM+   V PN  T++
Sbjct: 645 GNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            + +G     +  KV E + +M E    PD   + I+ + L+
Sbjct: 705 AIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLS 746



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 212/428 (49%), Gaps = 18/428 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLR--------VFGCEPDVFTYTTLVNGLCRTS 72
           P+ VTF  LI  +C   R+ +A  +  K+             EPDV  Y TL++GLC+  
Sbjct: 338 PNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVG 397

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
                L L E M +  G     C P+T+TY  +IDG CK G ++K KEL  +M  + + P
Sbjct: 398 RQQEGLGLMERMRSQKG-----CAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAP 452

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           NVVT  +++ G C     + A   F+E   +G++ + VT+  +++  C     ++A  L 
Sbjct: 453 NVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELF 512

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M++ G  PDA  Y TL+ GF   GR+  A  +   ++ +G +     Y+ LI G+C+ 
Sbjct: 513 NEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRT 572

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +      +  EM   G+KPD + +NTL     +   ++ A K+  +M + GV     TY
Sbjct: 573 NKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATY 632

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRIL-KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
              I+  C NG   EA+E+F  ++   K   +   YN LI+ LCK+ +++ A+ L   + 
Sbjct: 633 GAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMK 692

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + PN  TY+ +  GL ++  ++K  +    M E+A  P+ IT ++L      + E  
Sbjct: 693 IWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGE-- 750

Query: 432 KVIELLHK 439
             IE L K
Sbjct: 751 --IERLKK 756



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 213/437 (48%), Gaps = 16/437 (3%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           LI  LC   +      LFT++   G   +     +L+ GL R  +      L E+M   +
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--------NIKPNVVTYTSV 140
                  +PN VT+  +I+ +CK   VD A E+L +M           +++P+VV Y ++
Sbjct: 336 ------IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTL 389

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G C      E   L   M  Q G  P+ +T+N ++D  CK G++++   L D M + G
Sbjct: 390 IDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEG 449

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V P+  T NTL+ G C TGRV+ A   FV  +  G K    +Y+ LIN +C     E A+
Sbjct: 450 VAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAM 509

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L++EML  G  PD +++ TL  G  +  ++  A  +  E+++ G+  DT  Y T I G 
Sbjct: 510 ELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGF 569

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C+        E+   +     + D   YN+LI    K+G L+ A ++ R +    +VP V
Sbjct: 570 CRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTV 629

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            TY  +I   C +G  ++A ++F DM+  + V PN + +++LI    + N+    + L+ 
Sbjct: 630 ATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLME 689

Query: 439 KMKEINVMPDASIVSIV 455
            MK   V P+ +  + +
Sbjct: 690 DMKIWGVTPNTTTYNAI 706



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 169/358 (47%), Gaps = 35/358 (9%)

Query: 1   MGRVSHGFVVLGRIL--KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDV 58
           +GR   G  ++ R+   K C  PD +T+  LI G C    I +   LF ++   G  P+V
Sbjct: 396 VGRQQEGLGLMERMRSQKGC-APDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNV 454

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV------------------------ 94
            T  TLV G+CRT     A+N F E      +   V                        
Sbjct: 455 VTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNE 514

Query: 95  -----CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
                C P+ + Y T+I G  + G +  A  +L ++K   I+P+ V Y ++I GFC    
Sbjct: 515 MLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNK 574

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
           ++    +  EM + G++P+ +T+N ++    KNG +  A +++  MI+ GV P   TY  
Sbjct: 575 FHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGA 634

Query: 210 LLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           +++ +CL G  N A E+F  M++      +TV  Y+ILIN  CKN +++ A+SL  +M  
Sbjct: 635 VINAYCLNGNGNEAMEIFKDMKAASKVPPNTVI-YNILINSLCKNNKVKSAVSLMEDMKI 693

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            G+ P+   +N +F GL +   +E+ F+  D M  +    D  T     + L   G I
Sbjct: 694 WGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEI 751



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 186/410 (45%), Gaps = 17/410 (4%)

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG------FVDKAKEL 121
           L R+     AL + +EM   N +    C PN  T   +   L K          D+   L
Sbjct: 200 LLRSGRVKDALKVIDEMFESNDDSN--CRPNDATGDILFSFLLKRERNEELLSEDEIVNL 257

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +L+  +  +  +      +I   C  +  N    LF EM+  G        N ++  L +
Sbjct: 258 VLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAR 317

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME--------SM 233
            G  +  + L++ M++  ++P+  T+  L++  C   RV+ A E+   M         S+
Sbjct: 318 EGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISV 377

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIHNTLFVGLFEIHQVER 292
             +  V  Y+ LI+G CK    +  L L   M S KG  PD + +N L  G  +  ++E+
Sbjct: 378 SVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEK 437

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
             +LFDEM + GVA +  T  T + G+C+ G +  AV  F   +    + D   Y +LI+
Sbjct: 438 GKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALIN 497

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
             C     E A+ELF  +      P+ + Y  +I G    G+M  A  +  ++++  + P
Sbjct: 498 AFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRP 557

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + + ++ LI GF R N+  +V E+L +M+E  + PD    + ++   +KN
Sbjct: 558 DTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKN 607



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 7/296 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRVS          +     DAVT+T+LI   C  +   +A  LF ++   GC PD   Y
Sbjct: 468 GRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVY 527

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G  +      A  +  E+     + G+   P+TV Y T+I G C+     +  E+
Sbjct: 528 YTLISGFSQAGRMADASFVLAELK----KLGI--RPDTVCYNTLIGGFCRTNKFHRVFEM 581

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M++  +KP+ +TY ++I       D   A+++  +M+  GV P V T+  +++  C 
Sbjct: 582 LKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCL 641

Query: 182 NGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           NG  +EA  +  D+     V P+   YN L++  C   +V  A  L   M+  G      
Sbjct: 642 NGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTT 701

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           +Y+ +  G    K++E        M+     PD +    L   L  + ++ER  K 
Sbjct: 702 TYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKF 757



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 42/258 (16%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +   +LKS  +PDA+ + +LI G     R+ +A+ +  +L+  G  PD   Y TL+ G C
Sbjct: 511 LFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFC 570

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           RT+       + +EM     E G+  +P+T+TY T+I    K G +  A++++ +M    
Sbjct: 571 RTNKFHRVFEMLKEME----EAGL--KPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-------------------------- 163
           + P V TY +VI  +C   + NEA  +F +M                             
Sbjct: 625 VVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSA 684

Query: 164 ----------GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
                     GV PN  T+N I   L     +++    +D MI+H   PD  T   L + 
Sbjct: 685 VSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEW 744

Query: 214 FCLTGRVNHAKELFVSME 231
               G +   K+     E
Sbjct: 745 LSAVGEIERLKKFVAGCE 762



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 30/221 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++    VL  + K    PD V + +LI G C  ++      +  ++   G +PD  TY
Sbjct: 538 GRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITY 597

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA--------------------NGNG----------EF 91
            TL+    +      A  +  +M                     NGNG          + 
Sbjct: 598 NTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKA 657

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                PNTV Y  +I+ LCK   V  A  L+  MK   + PN  TY ++ +G    KD  
Sbjct: 658 ASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLE 717

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +       M++    P+ +T  ++ + L   G+++   + +
Sbjct: 718 KVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFV 758


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 250/494 (50%), Gaps = 33/494 (6%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G +L +    + V   +  + LC   +  +A  L  ++   G  PD  TY+ ++  LC
Sbjct: 175 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 234

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
             +    A  LF+EM       GV   P+  TYT +ID  CK G +++A+ L  +M+   
Sbjct: 235 HATKVEKAFLLFQEMKM----VGVT--PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P VVTYT++I  +  AK   +A  +F  M+D G +PN VT+  ++D LCK G + +A 
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348

Query: 190 RLLDLMI----------------QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            +   +I                +H + P+  TY  L+DG C   +V+HA EL  +M S 
Sbjct: 349 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 408

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GC+     Y  LI+G+CK  +I+ A  ++ +M   G  P V  + +L   +F+  +++ A
Sbjct: 409 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 468

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            K+  +M ++    +  TY   IDGLC+ G   +A++L   +    C  ++  Y +LIDG
Sbjct: 469 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 528

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           L K+G+++++L+LF  +      PN VTY ++I  LC  G +DKAR L  +M++      
Sbjct: 529 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 588

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN---EISLNSLP 470
           +  +   I+GF +    S  + +L +M+    +P A +  +++D  +K    EI++    
Sbjct: 589 LQGYRCAIQGFSKSFIAS--LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAME--- 643

Query: 471 SFTVHEQQEEVDES 484
              +H++  EV  S
Sbjct: 644 ---LHKEMMEVPSS 654



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 243/525 (46%), Gaps = 94/525 (17%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    F ++  +++  F PD  T++ +I  LC  +++ +A  LF ++++ G  PDV+T
Sbjct: 201 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 260

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++  C+      A  LFEEM +      V C P  VTYT +I    K   V +A +
Sbjct: 261 YTILIDSFCKAGLIEQAQWLFEEMRS------VGCSPTVVTYTALIHAYLKAKQVPQAND 314

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---------------- 164
           +  +M D   +PN VTY +++ G C A + ++A  ++ +++                   
Sbjct: 315 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 374

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + PNVVT+  ++D LCK  K+D A  LLD M+  G  P+   Y+ L+DGFC  G+++ A+
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434

Query: 225 ELFVSMESMG-----------------------------------CKHTVFSYSILINGY 249
           E+F+ M   G                                   C   V +Y+ +I+G 
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 494

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+  E E AL L S M  KG  P+VV +  L  GL +  +++ +  LF +M R G + + 
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 554

Query: 310 WTYRTFIDGLCKNGYIVEAVELF---------HTLRILKCEFD----------------- 343
            TYR  I+ LC  G + +A  L            L+  +C                    
Sbjct: 555 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 614

Query: 344 -------IRAYNSLIDGLCKSGRLEIALELFRSL---PCGVLVPNVVTYSIMIGGLCNDG 393
                     Y  LID   K+GRLEIA+EL + +   P  V   N + Y+ +I  LC   
Sbjct: 615 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM-YASLIQALCLAS 673

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           Q+++A  L+ +M     VP +  F  LI+G + + +  + ++L +
Sbjct: 674 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 718



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 227/464 (48%), Gaps = 30/464 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+ +L+ G   + ++     +   +   GC P+   + +LV+  C       A  L
Sbjct: 75  PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 134

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE------GFVDKAKELLLQMKDKNIKPNV 134
              M          C P  V Y   I  +C +        +D A+++  +M   N   N 
Sbjct: 135 LNRMTTCG------CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 188

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           V   +  R  C    +++A +L  EMM +G  P+  T++ ++  LC   K+++A  L   
Sbjct: 189 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 248

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   GV PD +TY  L+D FC  G +  A+ LF  M S+GC  TV +Y+ LI+ Y K K+
Sbjct: 249 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 308

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-------------- 300
           +  A  ++  M+  G +P+ V +  L  GL +   + +AF+++ ++              
Sbjct: 309 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 368

Query: 301 --QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
              R+ +A +  TY   +DGLCK   +  A EL   +    CE +   Y++LIDG CK+G
Sbjct: 369 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 428

Query: 359 RLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           +++ A E+F  +  CG L P+V TY+ +I  +  DG++D A  +   M +++  PNV+T+
Sbjct: 429 KIDSAQEVFLQMTKCGYL-PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 487

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +I G  RI E  K ++LL  M+E    P+    + ++D L K
Sbjct: 488 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGK 531



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 213/463 (46%), Gaps = 32/463 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI----- 75
           P+   F SL+   C E     A  L  ++   GC P    Y   +  +C           
Sbjct: 110 PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLL 169

Query: 76  -VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
            +A  ++ EM   N      C  N V        LC  G  DKA +L+ +M  K   P+ 
Sbjct: 170 DLAEKIYGEMLAAN------CVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDT 223

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
            TY+ VI   C+A    +A  LF EM   GV P+V T+ +++D  CK G +++A  L + 
Sbjct: 224 STYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEE 283

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   G  P   TY  L+  +    +V  A ++F  M   GC+    +Y  L++G CK   
Sbjct: 284 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 343

Query: 255 IEGALSLYSEMLSKG----------------IKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           I  A  +Y++++                   + P+VV +  L  GL + H+V+ A +L D
Sbjct: 344 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 403

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCK 356
            M  +G   +   Y   IDG CK G I  A E+F  L++ KC +   +  Y SLID + K
Sbjct: 404 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRMFK 461

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            GRL++A+++   +      PNVVTY+ MI GLC  G+ +KA  L   MEE    PNV+T
Sbjct: 462 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 521

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +  LI G  +  +    ++L  +M      P+     ++++ L
Sbjct: 522 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 196/463 (42%), Gaps = 66/463 (14%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D FT     + LC+      AL++ E       +F +    +TV  T +I GL +  + D
Sbjct: 9   DRFTVGCFAHALCKEGRWADALDMIER-----EDFKL----DTVLCTHMISGLMEASYFD 59

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A   L +M+  +  PNVVTY +++ GF   K     KR+   MM +G  PN   FN ++
Sbjct: 60  EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 119

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR------VNHAKELFVSM 230
              C       A +LL+ M   G  P    YN  +   C   +      ++ A++++  M
Sbjct: 120 HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 179

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            +  C     + +      C   + + A  L  EM+ KG  PD   ++ +   L    +V
Sbjct: 180 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 239

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E+AF LF EM+  GV  D +TY   ID  CK G I +A  LF  +R + C   +  Y +L
Sbjct: 240 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTAL 299

Query: 351 I-----------------------------------DGLCKSGRLEIALELFRSL----- 370
           I                                   DGLCK+G +  A E++  L     
Sbjct: 300 IHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSD 359

Query: 371 --------PC---GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
                   PC     L PNVVTY  ++ GLC   ++D A +L   M  +   PN I +D 
Sbjct: 360 SADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDA 419

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           LI GF +  +     E+  +M +   +P     + ++D + K+
Sbjct: 420 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKD 462



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 134/271 (49%), Gaps = 10/271 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL ++LK   TP+ VT+T++I GLC      +A  L + +   GC P+V TY
Sbjct: 463 GRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTY 522

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GL +     ++L+LF +M+         C PN VTY  +I+ LC  G +DKA+ L
Sbjct: 523 TALIDGLGKAGKIDLSLDLFTQMSRKG------CSPNYVTYRVLINHLCAAGLLDKARLL 576

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK       +  Y   I+GF  +K +  +  +  EM   G  P    + +++D   K
Sbjct: 577 LGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSK 634

Query: 182 NGKMDEASRLLDLMIQ--HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            G+++ A  L   M++    V+ D   Y +L+   CL  +V  A  L+  M   G    +
Sbjct: 635 AGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL 694

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
             +  LI G  + K+ + AL L   +  +G+
Sbjct: 695 SVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 7/182 (3%)

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M  +G   D +T   F   LCK G   +A+++         + D      +I GL ++  
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDF---KLDTVLCTHMISGLMEASY 57

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            + A+     + C   +PNVVTY  ++ G     Q+   + +   M      PN   F+ 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           L+  +    + +   +LL++M      P   + +I +  +   E     LPS  + +  E
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE----KLPSPDLLDLAE 173

Query: 480 EV 481
           ++
Sbjct: 174 KI 175


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 226/441 (51%), Gaps = 7/441 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+  LI  LC    I +A  LF K+R  G +  V+ Y +L+NG C+      A  L
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M            P   +Y+ +I GLC+ G +    EL  +M ++ I  N  T+T++
Sbjct: 431 LSGMVKEG------LTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 484

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC  K  +EA RLF +M+D  V PN VTFNV+++  C  G + +A +L D M++ G+
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD +TY +L+ G CLT  V+ A E    +E+       FS + L+ G+ +         
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 604

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ EM  +G+K D+V    +     + H  E++  LF EM+  GV  D   Y   ID L 
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   +++A+  +  + +     +   +  LI+ LCKSG L  A  L + +  G ++PN  
Sbjct: 665 KEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+  +     +G M+KA+DL   M +  +  ++++F++LI+G  +  +  + I+L+ K+
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKI 783

Query: 441 KEINVMPDASIVSIVVDLLAK 461
            E    PD    S ++  L K
Sbjct: 784 TESGFSPDCISYSTIIHELCK 804



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 232/465 (49%), Gaps = 8/465 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           + G VV  R+        AV +  L+ GLC   R+ EA  +   +   G   D  TY TL
Sbjct: 217 ARGLVV--RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V G CR     +AL +  +M       G V  P+    + +ID L K+  V++A  L  +
Sbjct: 275 VYGFCRMEELEMALRITHDMI----RLGFV--PSEANCSFMIDELRKKELVEEAFSLACK 328

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           + D  + PNV  Y ++I   C  + +++A RLF EM  +G++PN VT+ +++  LCK G 
Sbjct: 329 LGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +++A  L D M   G++   + YN+L++G+C  G ++ A+ L   M   G   T  SYS 
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI G C+N ++   + L+ EM  +GI  +      L  G  +  +++ A +LFD+M  + 
Sbjct: 449 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           V  +  T+   I+G C  G I +A +L+  +  +  + D   Y SLI GLC +  +  A 
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 568

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E    L     V N  + + ++ G   +G+  +   L+ +M    V  ++++F +++   
Sbjct: 569 EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 628

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           ++ ++  K   L  +MKE  V PD    + ++D L+K E  + +L
Sbjct: 629 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 213/458 (46%), Gaps = 12/458 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++H  + LG      F P     + +I  L  +  + EA +L  KL   G  P+VF Y 
Sbjct: 289 RITHDMIRLG------FVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++ LC+      A  LF+EMA G G      EPN VTY  +I  LCK G ++ A  L 
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+DK IK  V  Y S+I G+C     + A+ L   M+ +G+ P   +++ ++  LC+N
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +     L   M + G+  + +T+  L++GFC   +++ A  LF  M          ++
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +++I GYC    I  A  LY +M+  G+KPD   + +L  GL     V +A +   +++ 
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +    + ++    + G  + G   E   L+  + +   + D+ ++  ++    K    E 
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           +  LFR +    + P+ + Y+ MI  L  +  M +A + +  M  +   PN +T  +LI 
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 696

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
              +         L  +M   NV+P+    +  +D  A
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 203/444 (45%), Gaps = 6/444 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++L+S    D   +T+ I+  C    +  A  L  ++   G +     Y  L+ GLC+  
Sbjct: 188 KMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNM 247

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ +   M N     GV  +   VTY T++ G C+   ++ A  +   M      P
Sbjct: 248 RVQEAVEVKNVMVN----IGVTAD--EVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +    + +I      +   EA  L  ++ D G+ PNV  +N ++D+LCKN + D+A RL 
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M   G+ P+  TY  L+   C  G +  A  LF  M   G K TV+ Y+ LINGYCK 
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             ++ A  L S M+ +G+ P    ++ L  GL     +    +L  EM   G+A + +T+
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+G CK+  + EA  LF  +       +   +N +I+G C  G +  A +L+  +  
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L P+  TY  +I GLC    + KA +   D+E +  V N  +   L+ GF R    ++
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 601

Query: 433 VIELLHKMKEINVMPDASIVSIVV 456
              L  +M    V  D    +I+V
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIV 625



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 183/360 (50%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  T + I+  L K      A++L  +M    +  +   YT+ IR +C +++ + A+ L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
           + M  +GV+ + V +NV+M  LCKN ++ EA  + ++M+  GV  D  TY TL+ GFC  
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             +  A  +   M  +G   +  + S +I+   K + +E A SL  ++   G+ P+V  +
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N L   L +  + + A +LF EM   G+  +  TY   I  LCK G I +A+ LF  +R 
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              +  +  YNSLI+G CK G L+ A  L   +    L P   +YS +I GLC +G +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             +L  +M E  +  N  TF  LI GF +  +  +   L  KM + NV+P+    +++++
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 188/377 (49%), Gaps = 7/377 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           +++ S   P+ VTF  +I+G C    I +A  L+ ++   G +PD +TY +L++GLC TS
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A     ++ N    + V+   N  + T ++ G  +EG   +   L  +M  + +K 
Sbjct: 563 GVSKANEFVADLEN---SYAVL---NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           ++V++T ++       D  ++  LF EM +QGV+P+ + +  ++D L K   M +A    
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M+  G  P+  T+  L++  C +G +  A+ L   M +       F+Y+  ++ +   
Sbjct: 677 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 736

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            ++E A  L+S ML +G    +V  N L  GL +  +++ A  L  ++  +G + D  +Y
Sbjct: 737 GDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISY 795

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I  LCK G I +A EL++ +     + D+ AYN  I      G  + AL ++ ++  
Sbjct: 796 STIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 855

Query: 373 GVLVPNVVTYSIMIGGL 389
             + PN  TY  ++ G+
Sbjct: 856 SGVQPNWDTYRALLSGI 872



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 176/354 (49%), Gaps = 7/354 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  ++++    PD  T+ SLI GLC  S + +A      L       + F+
Sbjct: 526 VGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFS 585

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T L+ G  R        +L++EMA    +       + V++T I+    K+   +K+  
Sbjct: 586 LTALLYGFFREGRFTETYHLWDEMAVRGVKL------DLVSFTIIVYAALKQHDKEKSCV 639

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +MK++ +KP+ + YT +I      ++  +A   + +M+  G  PN VT  V+++ LC
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 699

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G +  A  L   M+   V P+ FTYN  LD F   G +  AK+L  +M   G   ++ 
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIV 758

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S++ILI G CK  +I+ A+ L S++   G  PD + ++T+   L ++  + +AF+L++EM
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
              G+  D   Y  FI     +G   +A+ ++  +     + +   Y +L+ G+
Sbjct: 819 LYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 149/302 (49%)

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +  G+  N  T + I+  L K  +   A  L D M+Q GV  D + Y   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A+ L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+  D V + TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             ++ AYN+LID LCK+ R + A  LF+ +    L PN VTY+I+I  LC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           LF  M +  +   V  ++ LI G+ +     +   LL  M +  + P A+  S ++  L 
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 461 KN 462
           +N
Sbjct: 455 RN 456



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 28/224 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD + +T +I  L  E  +++A   + ++ V G  P+  T+T L+N LC++ +   A  L
Sbjct: 651 PDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELL 710

Query: 81  FEEMANGN---GEFGVVC-------------------------EPNTVTYTTIIDGLCKE 112
            +EM  GN    +F   C                           + V++  +I GLCK 
Sbjct: 711 CKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKA 770

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G + +A +L+ ++ +    P+ ++Y+++I   C   D N+A  L+ EM+ +G++P+VV +
Sbjct: 771 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           N+ +     +G+ D+A  +   MI+ GV+P+  TY  LL G  L
Sbjct: 831 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 250/494 (50%), Gaps = 33/494 (6%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G +L +    + V   +  + LC   +  +A  L  ++   G  PD  TY+ ++  LC
Sbjct: 240 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 299

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
             +    A  LF+EM       GV   P+  TYT +ID  CK G +++A+ L  +M+   
Sbjct: 300 HATKVEKAFLLFQEMKM----VGVT--PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P VVTYT++I  +  AK   +A  +F  M+D G +PN VT+  ++D LCK G + +A 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 190 RLLDLMI----------------QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            +   +I                +H + P+  TY  L+DG C   +V+HA EL  +M S 
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GC+     Y  LI+G+CK  +I+ A  ++ +M   G  P V  + +L   +F+  +++ A
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            K+  +M ++    +  TY   IDGLC+ G   +A++L   +    C  ++  Y +LIDG
Sbjct: 534 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 593

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           L K+G+++++L+LF  +      PN VTY ++I  LC  G +DKAR L  +M++      
Sbjct: 594 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 653

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN---EISLNSLP 470
           +  +   I+GF +    S  + +L +M+    +P A +  +++D  +K    EI++    
Sbjct: 654 LQGYRCAIQGFSKSFIAS--LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAME--- 708

Query: 471 SFTVHEQQEEVDES 484
              +H++  EV  S
Sbjct: 709 ---LHKEMMEVPSS 719



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 243/525 (46%), Gaps = 94/525 (17%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    F ++  +++  F PD  T++ +I  LC  +++ +A  LF ++++ G  PDV+T
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++  C+      A  LFEEM +      V C P  VTYT +I    K   V +A +
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRS------VGCSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---------------- 164
           +  +M D   +PN VTY +++ G C A + ++A  ++ +++                   
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + PNVVT+  ++D LCK  K+D A  LLD M+  G  P+   Y+ L+DGFC  G+++ A+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 225 ELFVSMESMG-----------------------------------CKHTVFSYSILINGY 249
           E+F+ M   G                                   C   V +Y+ +I+G 
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+  E E AL L S M  KG  P+VV +  L  GL +  +++ +  LF +M R G + + 
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619

Query: 310 WTYRTFIDGLCKNGYIVEAVELF---------HTLRILKCEFD----------------- 343
            TYR  I+ LC  G + +A  L            L+  +C                    
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679

Query: 344 -------IRAYNSLIDGLCKSGRLEIALELFRSL---PCGVLVPNVVTYSIMIGGLCNDG 393
                     Y  LID   K+GRLEIA+EL + +   P  V   N + Y+ +I  LC   
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM-YASLIQALCLAS 738

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           Q+++A  L+ +M     VP +  F  LI+G + + +  + ++L +
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 229/468 (48%), Gaps = 31/468 (6%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC  P+ VT+ +L+ G   + ++     +   +   GC P+   + +LV+  C       
Sbjct: 137 SCI-PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 195

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE------GFVDKAKELLLQMKDKNI 130
           A  L   M          C P  V Y   I  +C +        +D A+++  +M   N 
Sbjct: 196 AYKLLNRMTTCG------CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANC 249

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
             N V   +  R  C    +++A +L  EMM +G  P+  T++ ++  LC   K+++A  
Sbjct: 250 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 309

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M   GV PD +TY  L+D FC  G +  A+ LF  M S+GC  TV +Y+ LI+ Y 
Sbjct: 310 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM---------- 300
           K K++  A  ++  M+  G +P+ V +  L  GL +   + +AF+++ ++          
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429

Query: 301 ------QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                  R+ +A +  TY   +DGLCK   +  A EL   +    CE +   Y++LIDG 
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489

Query: 355 CKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           CK+G+++ A E+F  +  CG L P+V TY+ +I  +  DG++D A  +   M +++  PN
Sbjct: 490 CKAGKIDSAQEVFLQMTKCGYL-PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           V+T+  +I G  RI E  K ++LL  M+E    P+    + ++D L K
Sbjct: 549 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGK 596



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 213/458 (46%), Gaps = 22/458 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+   F SL+   C E     A  L  ++   GC P    Y   +  +C     + + +L
Sbjct: 175 PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC-GQEKLPSPDL 233

Query: 81  FEEMANGNGE-FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            +      GE     C  N V        LC  G  DKA +L+ +M  K   P+  TY+ 
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           VI   C+A    +A  LF EM   GV P+V T+ +++D  CK G +++A  L + M   G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P   TY  L+  +    +V  A ++F  M   GC+    +Y  L++G CK   I  A 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 260 SLYSEMLSKG----------------IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +Y++++                   + P+VV +  L  GL + H+V+ A +L D M  +
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLE 361
           G   +   Y   IDG CK G I  A E+F  L++ KC +   +  Y SLID + K GRL+
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRMFKDGRLD 531

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A+++   +      PNVVTY+ MI GLC  G+ +KA  L   MEE    PNV+T+  LI
Sbjct: 532 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            G  +  +    ++L  +M      P+     ++++ L
Sbjct: 592 DGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 213/501 (42%), Gaps = 66/501 (13%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + P  VT+ +L++ L +  ++     +  ++   G   D FT     + LC+      AL
Sbjct: 36  YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL 95

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++ E       +F +    +TV  T +I GL +  + D+A   L +M+  +  PNVVTY 
Sbjct: 96  DMIERE-----DFKL----DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYR 146

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +++ GF   K     KR+   MM +G  PN   FN ++   C       A +LL+ M   
Sbjct: 147 TLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTC 206

Query: 199 GVRPDAFTYNTLLDGFCLTGR------VNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           G  P    YN  +   C   +      ++ A++++  M +  C     + +      C  
Sbjct: 207 GCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV 266

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            + + A  L  EM+ KG  PD   ++ +   L    +VE+AF LF EM+  GV  D +TY
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI--------------------- 351
              ID  CK G I +A  LF  +R + C   +  Y +LI                     
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 352 --------------DGLCKSGRLEIALELFRSL-------------PC---GVLVPNVVT 381
                         DGLCK+G +  A E++  L             PC     L PNVVT
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y  ++ GLC   ++D A +L   M  +   PN I +D LI GF +  +     E+  +M 
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 442 EINVMPDASIVSIVVDLLAKN 462
           +   +P     + ++D + K+
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKD 527



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 134/271 (49%), Gaps = 10/271 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL ++LK   TP+ VT+T++I GLC      +A  L + +   GC P+V TY
Sbjct: 528 GRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTY 587

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GL +     ++L+LF +M+         C PN VTY  +I+ LC  G +DKA+ L
Sbjct: 588 TALIDGLGKAGKIDLSLDLFTQMSRKG------CSPNYVTYRVLINHLCAAGLLDKARLL 641

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK       +  Y   I+GF  +K +  +  +  EM   G  P    + +++D   K
Sbjct: 642 LGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSK 699

Query: 182 NGKMDEASRLLDLMIQ--HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            G+++ A  L   M++    V+ D   Y +L+   CL  +V  A  L+  M   G    +
Sbjct: 700 AGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL 759

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
             +  LI G  + K+ + AL L   +  +G+
Sbjct: 760 SVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 155/393 (39%), Gaps = 81/393 (20%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           +KD   +P+ VTY ++++    A   +   R+  EM + G   +  T       LCK G+
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 185 --------------------------------MDEASRLLDLMIQHGVRPDAFTYNTLLD 212
                                            DEA   L  M  +   P+  TY TLL 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           GF    ++   K +   M + GC      ++ L++ YC  K+   A  L + M + G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 273 DVVIHNTLFVG------------------------------------------LFEIHQV 290
             V++N +F+G                                          L  + + 
Sbjct: 211 GYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           ++AF+L  EM R G   DT TY   I  LC    + +A  LF  ++++    D+  Y  L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 351 IDGLCKSGRLEIALELF---RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           ID  CK+G +E A  LF   RS+ C    P VVTY+ +I       Q+ +A D+F  M +
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCS---PTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
               PN +T+  L+ G  +    SK  E+  K+
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/375 (20%), Positives = 142/375 (37%), Gaps = 73/375 (19%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           + D G +P+ VT+N ++  L   G++D   R+   M + G   D FT        C  GR
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 220 VNHAKELF----VSMESMGCKH----------------------------TVFSYSILIN 247
              A ++       ++++ C H                             V +Y  L++
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+ K K++     + + M+++G  P+  + N+L            A+KL + M   G   
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 308 DTWTYRTFIDGLCKN-----------------------------------------GYIV 326
               Y  FI  +C                                           G   
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A +L   +       D   Y+ +I  LC + ++E A  LF+ +    + P+V TY+I+I
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
              C  G +++A+ LF +M      P V+T+  LI  +++  +  +  ++ H+M +    
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390

Query: 447 PDASIVSIVVDLLAK 461
           P+      +VD L K
Sbjct: 391 PNDVTYGALVDGLCK 405



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/335 (22%), Positives = 111/335 (33%), Gaps = 50/335 (14%)

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           V T    +   C +   D    L D     G RP   TYN L+      G+V+    +  
Sbjct: 9   VATLRASLRRTCSHAAGDSEDPLKDF----GYRPSKVTYNALVQVLSSAGQVDLGFRVQK 64

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   G     F+     +  CK      AL +      +  K D V+   +  GL E  
Sbjct: 65  EMSESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEAS 121

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
             + A      M+ N    +  TYRT + G  K   +     + + +    C  +   +N
Sbjct: 122 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 181

Query: 349 SLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCND--------------- 392
           SL+   C       A +L  R   CG   P  V Y+I IG +C                 
Sbjct: 182 SLVHSYCNEKDYAYAYKLLNRMTTCGC-PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 240

Query: 393 --------------------------GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
                                     G+ DKA  L  +M     VP+  T+  +I     
Sbjct: 241 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 300

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +  K   L  +MK + V PD    +I++D   K
Sbjct: 301 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 7/213 (3%)

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G +P  V +N L   L    QV+  F++  EM  +G   D +T   F   LCK G   +A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           +++         + D      +I GL ++   + A+     + C   +PNVVTY  ++ G
Sbjct: 95  LDMIEREDF---KLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
                Q+   + +   M      PN   F+ L+  +    + +   +LL++M      P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
             + +I +  +   E     LPS  + +  E++
Sbjct: 212 YVVYNIFIGSICGQE----KLPSPDLLDLAEKI 240


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 241/531 (45%), Gaps = 98/531 (18%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY----------------- 61
           F PD V +T +I GLC  S   EA    T++R   C P+V TY                 
Sbjct: 38  FVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCK 97

Query: 62  ------------------TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
                              +LV+  CR+     A  L ++M          C+P  V Y 
Sbjct: 98  RILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCG------CQPGYVVYN 151

Query: 104 TIIDGLCK-----EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
            +I G+C      +  +D A++   +M +  +  N V  ++  R  C    + +A  +  
Sbjct: 152 ILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIR 211

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           EMM +G  P+  T++ ++  LC   K+++A +L   M ++G+ PD + Y TL+D FC  G
Sbjct: 212 EMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAG 271

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            +  A+  F  ME  GC   V +Y+ LI+ Y K++++  A  +Y  MLSKG  P++V + 
Sbjct: 272 FIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYT 331

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGV-----------------AADTWTYRTFIDGLCK 321
            L  GL +  ++E+A +++  M++  V                   + +TY   +DGLCK
Sbjct: 332 ALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCK 391

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LPCGV------ 374
              + EA +L  ++ +  CE +   Y++LIDG CK+G+L+ A E+F + L CG       
Sbjct: 392 AYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYT 451

Query: 375 ----------------------------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
                                         PNVV Y+ MI GLC  G+ D+A  L + ME
Sbjct: 452 YSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMME 511

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           E    PNV+T+  +I GF +     K +ELL +M      P+     ++++
Sbjct: 512 EKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLIN 562



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 222/453 (49%), Gaps = 25/453 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    + V+  ++   F PD  T++ +I  LC  S++ +A  LF +++  G  PDV+ 
Sbjct: 200 IGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYV 259

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL++  C+      A N F+EM          C PN VTYT +I    K   V KA E
Sbjct: 260 YTTLIDSFCKAGFIEQARNWFDEMERDG------CAPNVVTYTALIHAYLKSRKVSKANE 313

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV--------------- 165
           +   M  K   PN+VTYT++I G C A    +A +++  M  + V               
Sbjct: 314 VYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGA 373

Query: 166 --QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
             +PNV T+  ++D LCK  ++ EA  LL  M   G  P+   Y+ L+DG C  G+++ A
Sbjct: 374 SNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEA 433

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           +E+F +M   G    V++YS LI+   K+K ++ AL + S+ML     P+VVI+  +  G
Sbjct: 434 QEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDG 493

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L ++ + + A+KL   M+  G   +  TY   IDG  K+G + + +EL   +    C  +
Sbjct: 494 LCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPN 553

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              Y  LI+  C +G L+ A +L   +       +V  Y  +I G   + +   +  L  
Sbjct: 554 FVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSF 611

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           ++ EN  VP    + +LI  FI+       +EL
Sbjct: 612 EISENDSVPVAPVYRVLIDNFIKAGRLEIALEL 644



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 217/433 (50%), Gaps = 19/433 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ VT+T+LI       ++ +A  ++  +   GC P++ TYT L++GLC+      A  
Sbjct: 289 APNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQ 348

Query: 80  LFEEMANGNGEF-----------GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           +++ M   N E            G   EPN  TY  ++DGLCK   V +A++LL  M  +
Sbjct: 349 IYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             +PN V Y ++I G C A   +EA+ +F  M++ G  PNV T++ ++D L K+ ++D A
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++L  M+++   P+   Y  ++DG C  G+ + A +L V ME  GC   V +Y+ +I+G
Sbjct: 469 LKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDG 528

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           + K+  +E  L L  +M SKG  P+ V +  L         ++ A KL +EM++      
Sbjct: 529 FGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRH 588

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
              YR  I+G   N   + ++ L   +           Y  LID   K+GRLEIALEL  
Sbjct: 589 VAGYRKVIEGF--NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNE 646

Query: 369 SL----PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            L    P      N+  +  +I  L    + DKA +L+ DM     +P +     LI+G 
Sbjct: 647 ELSSFSPFSAANQNI--HITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGL 704

Query: 425 IRINEPSKVIELL 437
           +R+N   + ++LL
Sbjct: 705 LRVNRWEEALQLL 717



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 213/472 (45%), Gaps = 66/472 (13%)

Query: 49  LRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG 108
           +   G   D FT     + LC++     AL+L E+      EF     P+TV YT +I G
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK-----EEF----VPDTVLYTKMISG 51

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           LC+    ++A + L +M+  +  PNV+TY  ++ G    +     KR+   M+ +G  P+
Sbjct: 52  LCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPS 111

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT---GR--VNHA 223
              FN ++   C++G    A +LL  M+Q G +P    YN L+ G C +   G+  ++ A
Sbjct: 112 PRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLA 171

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           ++ +  M   G      + S      C   + E A ++  EM+SKG  PD   ++ +   
Sbjct: 172 EKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGY 231

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR------- 336
           L    +VE+AF+LF EM+RNG+A D + Y T ID  CK G+I +A   F  +        
Sbjct: 232 LCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPN 291

Query: 337 ----------ILK------------------CEFDIRAYNSLIDGLCKSGRLEIALEL-- 366
                      LK                  C  +I  Y +LIDGLCK+G++E A ++  
Sbjct: 292 VVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351

Query: 367 ---------------FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
                          FR +      PNV TY  ++ GLC   Q+ +ARDL   M      
Sbjct: 352 IMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCE 411

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           PN + +D LI G  +  +  +  E+   M E    P+    S ++D L K++
Sbjct: 412 PNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 155/319 (48%), Gaps = 49/319 (15%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V + +LI G C   ++ EA  +FT +   G +P+V+TY++L++ L +     +AL +
Sbjct: 412 PNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKV 471

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M   +      C PN V YT +IDGLCK G  D+A +L++ M++K   PNVVTYT++
Sbjct: 472 LSKMLENS------CAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAM 525

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ--- 197
           I GF  +    +   L  +M  +G  PN VT+ V+++  C  G +DEA +LL+ M Q   
Sbjct: 526 IDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYW 585

Query: 198 ----HGVR--------------------------PDAFTYNTLLDGFCLTGRVNHAKELF 227
                G R                          P A  Y  L+D F   GR+  A EL 
Sbjct: 586 PRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELN 645

Query: 228 VSMESMGCKHTVFSYS------ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
             + S     + FS +       LI       + + A  LY++M+S+G  P++ I   L 
Sbjct: 646 EELSSF----SPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLI 701

Query: 282 VGLFEIHQVERAFKLFDEM 300
            GL  +++ E A +L D +
Sbjct: 702 KGLLRVNRWEEALQLLDSI 720


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 229/461 (49%), Gaps = 10/461 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR +    +L  + +    PDAV + ++I  LC +  + EAA L  ++ + GC  DV T
Sbjct: 188 LGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNT 247

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  +V G+C       A  L + M          C P  +TY  ++ GLC+    D+A+ 
Sbjct: 248 FDDVVRGMCGLGRVREAARLVDRMMTKG------CMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L ++ + N    VV + +VI G        EA  L+  M  +G QP+  T++++M  LC
Sbjct: 302 MLGRVPELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++  A RLL  M + G  P+  TY  +L  FC  G  +  + L   M + G      
Sbjct: 358 KLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ +I   CK+  ++ A+ L  EM S+G  PD+  +NT+   L    Q+E A  +F+ +
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV A+  TY T I  L ++G   +AV L   + +  C  D+ +YN LI  +CK G +
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 537

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + +L L   +    + PN V+Y+I+I  LC + ++  A +L   M    + P+++T++ L
Sbjct: 538 DRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL 597

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I G  ++      + LL K+   NV PD    +I++    K
Sbjct: 598 INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 227/457 (49%), Gaps = 11/457 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    +L  +L      D  TF  +++G+C   R+ EAA L  ++   GC P V TY
Sbjct: 224 GGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY 283

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLCR      A  +           G V E N V + T+I G   EG + +A EL
Sbjct: 284 GFLLQGLCRVRQADEARAML----------GRVPELNVVLFNTVIGGCLAEGKLAEATEL 333

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  K  +P+  TY+ ++ G C     + A RL  EM  +G  PNVVT+ +++   CK
Sbjct: 334 YETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 393

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG  D+   LL+ M   G+  ++  YN ++   C  GR++ A  L   M S GC   + S
Sbjct: 394 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 453

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I   C N+++E A  ++  +L +G+  + + +NT+   L    + + A +L  EM 
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 513

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G + D  +Y   I  +CK+G +  ++ L   +     + +  +YN LI  LCK  R+ 
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 573

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALEL + +    L P++VTY+ +I GLC  G M  A +L   +    V P++IT+++LI
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633

Query: 422 RGFIRINEPSKVIELLHK-MKEINVMPDASIVSIVVD 457
               ++        LL++ M  +  + D  I+ I+ D
Sbjct: 634 SWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPD 670



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 213/441 (48%), Gaps = 10/441 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   TF    + LC   R  EA AL   +   GC PD   Y T+++ LC       A  L
Sbjct: 173 PTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 232

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM        + C  +  T+  ++ G+C  G V +A  L+ +M  K   P V+TY  +
Sbjct: 233 LNEM------LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFL 286

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G C  +  +EA+     M+ +  + NVV FN ++      GK+ EA+ L + M   G 
Sbjct: 287 LQGLCRVRQADEAR----AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGC 342

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PDA TY+ L+ G C  GR++ A  L   ME  G    V +Y+I+++ +CKN   +   +
Sbjct: 343 QPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 402

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM +KG+  +   +N +   L +  +++ A  L  EM+  G   D  +Y T I  LC
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            N  + EA  +F  L       +   YN++I  L + GR + A+ L + +       +VV
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y+ +I  +C DG +D++  L  +M E  + PN +++++LI    +       +EL  +M
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582

Query: 441 KEINVMPDASIVSIVVDLLAK 461
               + PD    + +++ L K
Sbjct: 583 LNQGLAPDIVTYNTLINGLCK 603



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 6/349 (1%)

Query: 117 KAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNV 174
           +A  LL Q+  +  ++P+  +Y  V+     A    +A  L+  M+ +  V P   TF V
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
               LC+ G+ +EA  LL  M +HG  PDA  Y T++   C  G V  A  L   M  MG
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C   V ++  ++ G C    +  A  L   M++KG  P V+ +  L  GL  + Q + A 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            +   +    V      + T I G    G + EA EL+ T+ +  C+ D   Y+ L+ GL
Sbjct: 301 AMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK GR+  A+ L R +      PNVVTY+I++   C +G  D  R L  +M    +  N 
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             ++ +I    +     + + L+ +M+     PD    + ++  L  NE
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 465


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++  +C +  + +A  L   L  FGCEPDV +Y  ++ GLC          L EEM    
Sbjct: 198 VLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR-- 255

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
               + C PN VT+ T+I  LC+ G  ++  E+L QM +    P++  Y ++I G C   
Sbjct: 256 ----MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEG 311

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
               A  +   M   G++PNVV +N ++  LC   + +E   LL  M       D  T+N
Sbjct: 312 HLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 371

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+D FC  G V+   EL   M   GC   V +Y+ +ING+CK   I+ A+ L   M + 
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G KP+ + +  +  GL    +   A  L  +M + G   +  T+ T I+ LCK G + +A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           +EL   + +  C  D+ +Y+++IDGL K+G+ + ALEL   +    + PN + YS +   
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           L  +G+++K   +F ++++  +  + + ++ +I    +  E  + IE L  M     +P+
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611

Query: 449 ASIVSIVVDLLAK 461
            S  +I++  LA 
Sbjct: 612 ESTYTILIRGLAS 624



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 218/442 (49%), Gaps = 8/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T+  +++ LCA  RI +A A+  ++   GC P    Y  ++   CR      A+ +
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            E++ A G       C  +      +++ +C +G VDKA  LL  +     +P+VV+Y +
Sbjct: 180 LEDLHARG-------CALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNA 232

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C AK W   + L  EM+     PN+VTFN ++  LC+NG  +    +L  M +HG
Sbjct: 233 VLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHG 292

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   Y T++DG C  G +  A E+   M S G K  V  Y+ L+ G C  +  E   
Sbjct: 293 CTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETE 352

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L +EM  K    D V  N L     +   V+R  +L ++M  +G   D  TY T I+G 
Sbjct: 353 ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGF 412

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G I EAV L  ++    C+ +  +Y  ++ GLC + R   A +L   +       N 
Sbjct: 413 CKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP 472

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +T++ +I  LC  G +++A +L   M  N   P++I++  +I G  +  +  + +ELL+ 
Sbjct: 473 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 532

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M    + P+  I S +   L++
Sbjct: 533 MVNKGMSPNTIIYSSIASALSR 554



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 199/385 (51%), Gaps = 6/385 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTF +LI  LC          +  ++   GC PD+  Y T+++G+C+  H  VA  +
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEI 319

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M +    +G+  +PN V Y T++ GLC     ++ +ELL +M DK+   + VT+  +
Sbjct: 320 LNRMPS----YGL--KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  FC     +    L  +M+  G  P+V+T+  +++  CK G +DEA  LL  M   G 
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P+  +Y  +L G C   R   A++L   M   GC     +++ LIN  CK   +E A+ 
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 493

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +ML  G  PD++ ++T+  GL +  + + A +L + M   G++ +T  Y +    L 
Sbjct: 494 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 553

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G I + +++F  ++      D   YN++I  LCK G  E A+E    +     VPN  
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDM 405
           TY+I+I GL ++G + +A+++  ++
Sbjct: 614 TYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 202/473 (42%), Gaps = 47/473 (9%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           V  +SLI+ LCA  R  EAA   +          V  Y  +V G CR      A  L   
Sbjct: 59  VRLSSLIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLAA- 114

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
                    V   PN  TY  ++  LC  G +  A  +L +M  +   P    Y  ++  
Sbjct: 115 --------AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEA 166

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C    +  A R+  ++  +G   +V   N++++ +C  G +D+A  LL  +   G  PD
Sbjct: 167 ACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPD 226

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK----------------------HTVFS 241
             +YN +L G C+  R    +EL   M  M C                       H V +
Sbjct: 227 VVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLA 286

Query: 242 -------------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
                        Y+ +I+G CK   ++ A  + + M S G+KP+VV +NTL  GL    
Sbjct: 287 QMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 346

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           + E   +L  EM       D  T+   +D  C+NG +   +EL   + +  C  D+  Y 
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYT 406

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           ++I+G CK G ++ A+ L +S+      PN ++Y+I++ GLC+  +   A DL   M + 
Sbjct: 407 TVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 466

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               N ITF+ LI    +     + IELL +M      PD    S V+D L K
Sbjct: 467 GCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 519



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 168/362 (46%), Gaps = 3/362 (0%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  ++ G C+ G ++ A+ L   +    + PN  TY  V+R  C      +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G  P    ++VI++  C+ G    A R+L+ +   G   D    N +L+  C  G V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  L   + S GC+  V SY+ ++ G C  K       L  EM+     P++V  NTL 
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L      ER  ++  +M  +G   D   Y T IDG+CK G++  A E+ + +     +
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  YN+L+ GLC + R E   EL   +       + VT++I++   C +G +D+  +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              M  +  +P+VIT+  +I GF +     + + LL  M      P+    +IV+  L  
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 462 NE 463
            E
Sbjct: 450 AE 451



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 145/285 (50%), Gaps = 8/285 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VTF  L+   C    +     L  ++ V GC PDV TYTT++NG C+      A+ L 
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLL 425

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCK-EGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + M          C+PNT++YT ++ GLC  E +VD A++L+ QM  +    N +T+ ++
Sbjct: 426 KSMT------ACGCKPNTISYTIVLKGLCSAERWVD-AEDLMSQMIQQGCPLNPITFNTL 478

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      +A  L  +M+  G  P++++++ ++D L K GK DEA  LL++M+  G+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+   Y+++       GR+N   ++F +++    +     Y+ +I+  CK  E E A+ 
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
             + M+S G  P+   +  L  GL     V+ A ++  E+   G 
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGA 643


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/420 (31%), Positives = 220/420 (52%), Gaps = 11/420 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+  L+K LC  +R+  A  L  ++   GCEPDV +YTT+++ + +       L  
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSK-------LGK 234

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            EE      E  +  +PN   Y  +I+G C+E  V +   LL QM +K I PNV+TY++V
Sbjct: 235 VEEAR----ELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTV 290

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I       +   A  ++ +M  +G  PNV TF  +M      G++ EA  + + M + G 
Sbjct: 291 ISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGF 350

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+   YNTL+ G C  G++  A  +   ME  GC   V +Y  LI+G+ K  ++ GA  
Sbjct: 351 EPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASE 410

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++++M++ G  P+VV++ ++   L       +A+ L ++M  +    +T T+ TFI GLC
Sbjct: 411 IWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLC 470

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            +G +  A+ LF  +    C  +I+ YN ++DGL K  R++ ALEL   +    +  N+V
Sbjct: 471 CSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLV 530

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ + GG CN G+ ++A  L   M    V P+ IT++ L   +    +    I+LL K+
Sbjct: 531 TYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKL 590



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 210/420 (50%), Gaps = 9/420 (2%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G V   R L   F P+   + +LI G C E ++ E   L  ++   G +P+V TY+T+++
Sbjct: 233 GKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVIS 292

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            L    +  +AL ++ +M      F   C PN  T+T+++ G    G V +A  +  +M 
Sbjct: 293 SLSGIGNVELALAVWAKM------FVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMA 346

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++  +PNVV Y ++I G C      EA  +  +M   G  PNV T+  ++D   K G + 
Sbjct: 347 EEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLV 406

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            AS + + M+ +G  P+   Y ++++  C +   + A  L   M +  C     +++  I
Sbjct: 407 GASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFI 466

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G C +  +E A++L+ +M   G  P++  +N +  GL + ++++ A +L  EM+  G+ 
Sbjct: 467 KGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGME 526

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY T   G C  G   EA++L   + +   + D   YN+L    C  G+++ A++L
Sbjct: 527 LNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQL 586

Query: 367 FRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD-MEENAVVPNVITFDMLIRGF 424
              L   G  VP V  Y+ ++ G+CN   +++A  L+LD M    +  N  T++ L+RG 
Sbjct: 587 LDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAV-LYLDKMLNEGICLNAATWNALVRGL 645



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 210/449 (46%), Gaps = 16/449 (3%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPDVFTYTTLVNGLCRTSHTIV 76
           F    +T+  +I+ L  E  +     L  ++++ G  C  D+F    ++N   R      
Sbjct: 75  FQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFI--NVINTYRRVGLAEQ 132

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           AL +F  +     EFG  C+P    Y  ++D +  E      + +   MK    +PNV T
Sbjct: 133 ALKMFYRIR----EFG--CQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYT 186

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y  +++  C     + A +L +EM ++G +P+VV++  ++  + K GK++EA R L +  
Sbjct: 187 YNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA-RELSIRF 245

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           Q    P+   YN L++GFC   +V     L   M   G    V +YS +I+       +E
Sbjct: 246 Q----PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL+++++M  +G  P+V    +L  G F   +V  A  +++ M   G   +   Y T I
Sbjct: 302 LALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLI 361

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            GLC +G + EAV +   +    C  ++  Y +LIDG  K+G L  A E++  +     +
Sbjct: 362 HGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCI 421

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PNVV Y+ M+  LC      +A  L   M  +   PN +TF+  I+G          I L
Sbjct: 422 PNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINL 481

Query: 437 LHKMKEINVMPDASIVSIVVD-LLAKNEI 464
             +M++    P+    + V+D LL +N I
Sbjct: 482 FCQMEQYGCSPNIKTYNEVLDGLLKENRI 510



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 9/320 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +  R+ +  F P+ V + +LI GLC+  ++ EA ++ +K+   GC P+V TY
Sbjct: 333 GRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTY 392

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G  +    + A  ++ +M   NG     C PN V YT++++ LC+     +A  L
Sbjct: 393 GALIDGFAKAGDLVGASEIWNKMMT-NG-----CIPNVVVYTSMVNVLCRSSMFSQAWSL 446

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M   N  PN VT+ + I+G C +     A  LF +M   G  PN+ T+N ++D L K
Sbjct: 447 IEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLK 506

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA  L+  M + G+  +  TYNT+  GFC  G+   A +L   M   G K    +
Sbjct: 507 ENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAIT 566

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIK--PDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           Y+ L   YC   +++ A+ L  + LS G K  P+V  + +L  G+     VE A    D+
Sbjct: 567 YNTLTYAYCMQGKVKTAIQLLDK-LSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDK 625

Query: 300 MQRNGVAADTWTYRTFIDGL 319
           M   G+  +  T+   + GL
Sbjct: 626 MLNEGICLNAATWNALVRGL 645



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 153/285 (53%), Gaps = 7/285 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     V  ++ ++  +P+  T+ +LI G      ++ A+ ++ K+   GC P+V  Y
Sbjct: 368 GKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVY 427

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T++VN LCR+S    A +L E+M+  N      C PNTVT+ T I GLC  G V+ A  L
Sbjct: 428 TSMVNVLCRSSMFSQAWSLIEKMSTDN------CPPNTVTFNTFIKGLCCSGRVECAINL 481

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM+     PN+ TY  V+ G        EA  L  EM ++G++ N+VT+N I    C 
Sbjct: 482 FCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCN 541

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTVF 240
            GK +EA +LL  M+  GV+PDA TYNTL   +C+ G+V  A +L   + + G     V 
Sbjct: 542 VGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVA 601

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +Y+ L+ G C    +E A+    +ML++GI  +    N L  GLF
Sbjct: 602 AYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLF 646



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVF 59
           +G+      +LG++L     PDA+T+ +L    C + ++  A  L  KL   G   P+V 
Sbjct: 542 VGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVA 601

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL 109
            YT+L+ G+C       A+   ++M N       +C  N  T+  ++ GL
Sbjct: 602 AYTSLLWGICNQIGVEEAVLYLDKMLNEG-----IC-LNAATWNALVRGL 645


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 227/471 (48%), Gaps = 48/471 (10%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
            T+ +LI  LC    + EA  L   ++  G  P    +  ++ GLCR      AL ++ +
Sbjct: 81  TTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQ 140

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M + +        P+ +TYT ++ GL K G +  A ++L +M      P+  T T V++ 
Sbjct: 141 MNDAH-------PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQS 193

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA-SRLLDLMIQHGVRP 202
            C     ++A+ L  EM+ +G+  N +T++ ++D LCK  ++DEA + LL  + + G  P
Sbjct: 194 LCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTP 253

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D  TY+T++DG C  GR+  A ++F   E M C  T  +Y+ LI GYC+  +++ A+ L 
Sbjct: 254 DIVTYSTVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLL 310

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M+     PDV+ + TL     ++ +++ A++LF +M  N ++ D  T+ + +DGLC  
Sbjct: 311 GKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 370

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G + +A+EL   +    C   I  YN ++DG CKS ++  A EL         VPN VTY
Sbjct: 371 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY 430

Query: 383 SIMIGG-------------------------------------LCNDGQMDKARDLFLDM 405
           +I++ G                                     LC DG+ D A   + +M
Sbjct: 431 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +   VP   TF  ++    + ++P +  ELL +M +    P       VV
Sbjct: 491 IQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVV 541



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 213/443 (48%), Gaps = 13/443 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+ H   V  R +     PD +T+T L+ GL    R+ +A  +  ++      PD  T 
Sbjct: 129 GRLRHALGVY-RQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTL 187

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +V  LC       A  L EEM +           N +TY+ ++DGLCK   +D+A  L
Sbjct: 188 TVVVQSLCLGDRVDDARELVEEMLHRG------MAANAITYSALVDGLCKCERLDEAVAL 241

Query: 122 LL-QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL ++  +   P++VTY++VI G C A    +A  +F EM      P  +T+N ++   C
Sbjct: 242 LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYC 298

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G MDEA RLL  M+     PD  TY TL+  FC  GR++ A ELF  M +      V 
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 358

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ L++G C    +E AL L  E+  +G  P +  +N +  G  + +QV +A +L  + 
Sbjct: 359 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADF 418

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL--KCEFDIRAYNSLIDGLCKSG 358
           +  G   +T TY   + G C+ G   +A++    L      C   +  Y  ++D LC+ G
Sbjct: 419 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 478

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R + A++ +  +     VP   T++ ++  LC   Q  +A +L  +M +    P   T D
Sbjct: 479 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 538

Query: 419 MLIRGFIRINEPSKVIELLHKMK 441
            ++  + R     K  EL  +++
Sbjct: 539 AVVSAYCRAGMIQKADELASELR 561



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 233/485 (48%), Gaps = 44/485 (9%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPDVFTYTTLVNGLCRTS 72
           +L + +  D+ TF  +++GL A +++     L   ++R  G  PD     T++  LC   
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
            T  A+ LF++MA    E G V   N  TY  +I  LCK   +D+A  LLL MK + + P
Sbjct: 61  DTTTAMALFDKMA----ELGAV---NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNP 113

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
             + +  VI G C A     A  ++ +M D    P+ +T+  ++  L K G++ +A ++L
Sbjct: 114 GTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVL 172

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+     PD  T   ++   CL  RV+ A+EL   M   G      +YS L++G CK 
Sbjct: 173 QEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKC 232

Query: 253 KEIEGALSLY-SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ---------- 301
           + ++ A++L   E+  +G  PD+V ++T+  GL +  ++  A  +F+EM           
Sbjct: 233 ERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNS 292

Query: 302 ------RNG----------------VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
                 R G                 A D  TY T +   CK G + +A ELF  +   K
Sbjct: 293 LIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK 352

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D+  + SL+DGLC  GR+E ALEL   +      P + TY+ ++ G C   Q+ KA 
Sbjct: 353 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAE 412

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM-KEINVMPDA-SIVSIVVD 457
           +L  D      VPN +T+++L+ G  R     + ++ L ++  E    P + ++ +I++D
Sbjct: 413 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 472

Query: 458 LLAKN 462
            L ++
Sbjct: 473 ALCRD 477



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 171/331 (51%), Gaps = 11/331 (3%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           ++LG + +  FTPD VT++++I GLC   R+ +A  +F ++    C P   TY +L+ G 
Sbjct: 241 LLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGY 297

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           CR      A+ L  +M + N      C P+ +TYTT++   CK G +D A EL  QM   
Sbjct: 298 CRAGDMDEAIRLLGKMVDDN------CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVAN 351

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            + P+VVT+TS++ G C      +A  L  E+  +G  P + T+N ++D  CK+ ++ +A
Sbjct: 352 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKA 411

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYSILI 246
             L+      G  P+  TYN L+ G C  GR + A +    + S G  C  +V  Y+I++
Sbjct: 412 EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 471

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +  C++   + A+  Y EM+ +G  P      T+   L + HQ ++A +L +EM + G  
Sbjct: 472 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 531

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
               T    +   C+ G I +A EL   LR+
Sbjct: 532 PGPGTCDAVVSAYCRAGMIQKADELASELRL 562



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 119/228 (52%), Gaps = 8/228 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+   + +  +++ +  +PD VTFTSL+ GLC E R+ +A  L  ++   GC P ++T
Sbjct: 335 MGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYT 394

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +V+G C+++    A    EE+       G V  PNTVTY  ++ G C+ G  D+A +
Sbjct: 395 YNCVVDGYCKSNQVRKA----EELVADFRSRGFV--PNTVTYNILVAGCCRAGRTDQALQ 448

Query: 121 LLLQMKDKN--IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            L Q+  +      +V  Y  ++   C     ++A + + EM+ +G  P   TF  ++  
Sbjct: 449 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 508

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           LCK  +  +A  LL+ MI++G  P   T + ++  +C  G +  A EL
Sbjct: 509 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 2/203 (0%)

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  E+  +G+ PD V  NT+   L +      A  LFD+M   G A +  TY   I  LC
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLC 91

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + EA+ L   ++          +N +I GLC++GRL  AL ++R +      P+ +
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFL 150

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ GL   G++  A  +  +M     VP+  T  ++++     +      EL+ +M
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
               +  +A   S +VD L K E
Sbjct: 211 LHRGMAANAITYSALVDGLCKCE 233


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 235/459 (51%), Gaps = 6/459 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M R+   F +   +++S   PD VT ++L+ GLC + R  EA ALF ++   G  P+  T
Sbjct: 272 MKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVT 331

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T ++ L +      +L L  EM +     GV  +   V YTT++D L KEG +++AK+
Sbjct: 332 YCTFIDSLAKVQRVNESLGLLGEMVS----RGVAMD--LVMYTTVMDRLGKEGKIEEAKD 385

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L      NI PN VTYT ++   C A + + A+++ ++M ++ V PNVVTF+ I++ L 
Sbjct: 386 VLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLV 445

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + +A+  +  M   G+ P+  TY TL+DGF        A +++  M   G +   F
Sbjct: 446 KRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNF 505

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
               L+NG  KN  IE A +L+ +M  +G+  D V + TL  GLF+   +  A K+  E+
Sbjct: 506 IVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQEL 565

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               ++ D   Y  FI+ LC+ G   EA      +R    E D   YN++I   C+ G  
Sbjct: 566 MERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNT 625

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL+L   +    + PN++TY+ ++ GL   G ++KA+ L  +M      P  +T+  +
Sbjct: 626 SKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRV 685

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           ++       P  ++E+   M    +  D ++ + +V +L
Sbjct: 686 LQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVL 724



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 229/457 (50%), Gaps = 7/457 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           ++    V+ R+     + D V + +L+ G         A  +  +++  G EP V T+TT
Sbjct: 205 MAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTT 264

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+   C+      A  L+E M       GV+  P+ VT + ++DGLC++G   +A  L  
Sbjct: 265 LIGEYCKMKRIEEAFTLYEGMVRS----GVL--PDVVTLSALVDGLCRDGRFSEAYALFR 318

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M    + PN VTY + I      +  NE+  L  EM+ +GV  ++V +  +MD L K G
Sbjct: 319 EMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEG 378

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K++EA  +L   +   + P+  TY  L+D  C  G ++ A+++ + ME       V ++S
Sbjct: 379 KIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFS 438

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            ++NG  K   I  A     +M   GI P+VV + TL  G F+    E A  ++ +M   
Sbjct: 439 SILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHE 498

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           GV A+ +   + ++GL KNG I EA  LF  +       D   Y +L+DGL K+G +  A
Sbjct: 499 GVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAA 558

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L++ + L    L P+ V Y++ I  LC  G+  +A+    +M    + P+  T++ +I  
Sbjct: 559 LKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISA 618

Query: 424 FIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVDLL 459
             R    SK ++LL++MK  ++ P+  +  ++VV LL
Sbjct: 619 QCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLL 655



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 228/508 (44%), Gaps = 68/508 (13%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+ VTF+S++ GL     I +AA    K++  G  P+V TY TL++G  +      AL+
Sbjct: 431 SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALD 490

Query: 80  LFEEM--------------------ANGN-----------GEFGVVCEPNTVTYTTIIDG 108
           ++ +M                     NGN           GE G++ +   V Y T++DG
Sbjct: 491 VYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLD--HVNYATLMDG 548

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           L K G +  A ++  ++ ++N+ P+ V Y   I   C    ++EAK    EM + G++P+
Sbjct: 549 LFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPD 608

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
             T+N ++   C+ G   +A +LL+ M    ++P+  TY TL+ G    G V  AK L  
Sbjct: 609 QATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLN 668

Query: 229 SMESMGCKHTVFS-----------------------------------YSILINGYCKNK 253
            M S G   T  +                                   Y+ L++  C + 
Sbjct: 669 EMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHG 728

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
               A  +  EML +GI PD +  N L +G  +   ++ AF  + +M   G++ +  T+ 
Sbjct: 729 MTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFN 788

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T + GL   G I EA  +   ++ +  E +   Y+ L+ G  K      AL L+  +   
Sbjct: 789 TLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK 848

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
             +P   TY+ +I      G M++A++LF +M+   V+    T+D+L+ G+ ++   ++V
Sbjct: 849 GFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEV 908

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
             LL  MKE+   P    +S +    +K
Sbjct: 909 RILLKDMKELGFKPSKGTISSMSRAFSK 936



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 214/440 (48%), Gaps = 14/440 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P A     LI  L A S ++ AA+ F  +       D  T  +++   C       AL+L
Sbjct: 49  PPARLLRRLIPAL-ASSGLVAAASRFRPV-----PGDPLTLNSIILSYCSLHALRPALSL 102

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
               +    +       +TV+Y   + GL ++G    A  +L +M  + +  + VT ++ 
Sbjct: 103 LRSSSGPQPQVAA----DTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTA 158

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPN---VVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           + G        EA  L  EM+ +G   +   VV +N ++D  CK   M  A  +++ M  
Sbjct: 159 LVGLSRTGLVGEAAAL-AEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTT 217

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+  D   YNTL+ GF  +G  + A E+   M++ G + +V +++ LI  YCK K IE 
Sbjct: 218 QGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEE 277

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A +LY  M+  G+ PDVV  + L  GL    +   A+ LF EM + GVA +  TY TFID
Sbjct: 278 AFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFID 337

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            L K   + E++ L   +       D+  Y +++D L K G++E A ++ R      + P
Sbjct: 338 SLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITP 397

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           N VTY++++   C  G +D A  + L MEE +V PNV+TF  ++ G ++    +K    +
Sbjct: 398 NCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYM 457

Query: 438 HKMKEINVMPDASIVSIVVD 457
            KMK+  + P+      ++D
Sbjct: 458 RKMKDSGIAPNVVTYGTLID 477



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 218/475 (45%), Gaps = 39/475 (8%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V++   + GL  +     A  + +++   G   D  T +T + GL RT     A  L 
Sbjct: 116 DTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALA 175

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           E +  G G  G+      V +  +IDG CK   +  A  ++ +M  + +  +VV Y +++
Sbjct: 176 EMLVRGRGIDGL----GVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLV 231

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GF Y+ D + A  +   M   GV+P+VVT   ++ E CK  +++EA  L + M++ GV 
Sbjct: 232 AGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVL 291

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  T + L+DG C  GR + A  LF  M+ +G      +Y   I+   K + +  +L L
Sbjct: 292 PDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGL 351

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM+S+G+  D+V++ T+   L +  ++E A  +      + +  +  TY   +D  C+
Sbjct: 352 LGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCR 411

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G I  A ++   +       ++  ++S+++GL K G +  A    R +    + PNVVT
Sbjct: 412 AGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVT 471

Query: 382 YSIMI-----------------------------------GGLCNDGQMDKARDLFLDME 406
           Y  +I                                    GL  +G +++A  LF DM 
Sbjct: 472 YGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMG 531

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           E  ++ + + +  L+ G  +       +++  ++ E N+ PDA + ++ ++ L +
Sbjct: 532 ERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCR 586



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 178/404 (44%), Gaps = 41/404 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V   +++   +PDAV +   I  LC   +  EA +   ++R  G EPD  TY
Sbjct: 553 GNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATY 612

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++  CR  +T  AL L  EM   +       +PN +TYTT++ GL + G V+KAK L
Sbjct: 613 NTMISAQCREGNTSKALKLLNEMKWSS------IKPNLITYTTLVVGLLEAGVVEKAKYL 666

Query: 122 LLQMKDKNIKPNVVTYTSVIRG-----------------------------------FCY 146
           L +M      P  +TY  V++                                     C 
Sbjct: 667 LNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCC 726

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
                +A  +  EM+ +G+ P+ +TFN ++   CK+  +D A      M+  G+ P+  T
Sbjct: 727 HGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIAT 786

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           +NTLL G    GR+  A  +   M+ MG +    +Y IL+ GY K      AL LY EM+
Sbjct: 787 FNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 846

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           SKG  P    +N+L     +   + +A +LF EM+R GV   + TY   ++G  K     
Sbjct: 847 SKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGT 906

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           E   L   ++ L  +      +S+     K G    A  L ++L
Sbjct: 907 EVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 207/455 (45%), Gaps = 17/455 (3%)

Query: 17  SCFTP---DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP----DVFTYTTLVNGLC 69
           S F P   D +T  S+I   C+   +  A +L       G +P    D  +Y   + GL 
Sbjct: 71  SRFRPVPGDPLTLNSIILSYCSLHALRPALSLLRSSS--GPQPQVAADTVSYNIFLAGLS 128

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL-LQMKDK 128
              H  +A  +  EM      +      + VT +T + GL + G V +A  L  + ++ +
Sbjct: 129 EQGHGRLAPPVLSEMCKRGVPW------DGVTMSTALVGLSRTGLVGEAAALAEMLVRGR 182

Query: 129 NIKP-NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
            I    VV + ++I G+C  +D   A  +   M  QG+  +VV +N ++     +G  D 
Sbjct: 183 GIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADA 242

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  + + M   GV P   T+ TL+  +C   R+  A  L+  M   G    V + S L++
Sbjct: 243 AWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVD 302

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G C++     A +L+ EM   G+ P+ V + T    L ++ +V  +  L  EM   GVA 
Sbjct: 303 GLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAM 362

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D   Y T +D L K G I EA ++           +   Y  L+D  C++G ++ A ++ 
Sbjct: 363 DLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQML 422

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    + PNVVT+S ++ GL   G + KA      M+++ + PNV+T+  LI GF + 
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKC 482

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                 +++   M    V  +  IV  +V+ L KN
Sbjct: 483 QGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKN 517



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 6/194 (3%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           + + F    ++L    +P+  TF +L+ GL +  RI EA  +  +++  G EP+  TY  
Sbjct: 765 LDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDI 824

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           LV G  + S+ + AL L+ EM +     G +  P   TY ++I    K G +++AKEL  
Sbjct: 825 LVTGYAKKSNKVEALRLYCEMVSK----GFI--PKASTYNSLISDFAKAGMMNQAKELFS 878

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +MK + +     TY  ++ G+   ++  E + L  +M + G +P+  T + +     K G
Sbjct: 879 EMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPG 938

Query: 184 KMDEASRLLDLMIQ 197
              EA RLL  + +
Sbjct: 939 MTWEARRLLKTLFK 952


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/419 (31%), Positives = 229/419 (54%), Gaps = 9/419 (2%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           + F +    L+S    +  TF +L+  LC E ++ EA  L+ ++   G  P+V +Y  ++
Sbjct: 351 NAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 409

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
            G CR  +   A  +++EM + NG       PN VT+T ++DG  K+G ++ A  +  +M
Sbjct: 410 LGHCRKDNINAACKVYKEMLD-NG-----FTPNAVTFTILMDGYFKKGDIENAFSIFHRM 463

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           KD NI P   T   +I+G C A    E + LF + + QG  P  + +N I+D   K G +
Sbjct: 464 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNI 523

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           + AS +   M + G+ P   TY +L+DGFC    ++ A +L   M+  G K  + +Y  L
Sbjct: 524 NLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTL 583

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I+G+CK ++++ A  L +E+   G+ P+  I+N++  G   ++ VE A  L+ +M   G+
Sbjct: 584 IDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 643

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF-DIRAYNSLIDGLCKSGRLEIAL 364
             D  TY + IDGL K+G ++ A ++ HT  + K    D RA+  LI+GLC  G+ E A 
Sbjct: 644 PCDLKTYTSLIDGLLKSGRLLYASDI-HTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 702

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           ++   +    ++P+V+ Y+ +I G   +G + +A  L  +M +  +VP+ IT+D+L+ G
Sbjct: 703 KILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 242/491 (49%), Gaps = 42/491 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    V++  I +S   P+ VT++ LI G C    I +A   +++++  G    V++ 
Sbjct: 277 GNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSL 336

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++ G  +      A  +F +      E G+    N  T+ T++  LCKEG +++A  L
Sbjct: 337 NSILEGYLKCQSWQNAFTMFNDAL----ESGLA---NVFTFNTLLSWLCKEGKMNEACNL 389

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE--- 178
             ++  K I PNVV+Y ++I G C   + N A +++ EM+D G  PN VTF ++MD    
Sbjct: 390 WDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFK 449

Query: 179 --------------------------------LCKNGKMDEASRLLDLMIQHGVRPDAFT 206
                                           LCK G+  E   L +  +  G  P    
Sbjct: 450 KGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP 509

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YNT++DGF   G +N A  ++  M  +G   +  +Y+ LI+G+CK   I+ AL L ++M 
Sbjct: 510 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 569

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            KG+K D+  + TL  G  +   ++ A +L +E++  G++ + + Y + I G      + 
Sbjct: 570 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 629

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA++L+  +       D++ Y SLIDGL KSGRL  A ++   +    ++P+   ++++I
Sbjct: 630 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 689

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLCN GQ + AR +  DM    ++P+V+ ++ LI G  +     +   L  +M +  ++
Sbjct: 690 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 749

Query: 447 PDASIVSIVVD 457
           PD     I+V+
Sbjct: 750 PDNITYDILVN 760



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 221/461 (47%), Gaps = 15/461 (3%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           +   +L  +  + + P   TFTS+I     E  + EA  L   +   G   ++   T+L+
Sbjct: 211 YALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLM 270

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
            G C   +   AL L  E++    E G+V  PN VTY+ +IDG CK G ++KA E   +M
Sbjct: 271 KGYCMQGNLRSALVLVNEIS----ESGLV--PNKVTYSVLIDGCCKNGNIEKAFEFYSEM 324

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           K K I+ +V +  S++ G+   + W  A  +F + ++ G+  NV TFN ++  LCK GKM
Sbjct: 325 KTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKM 383

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           +EA  L D +I  G+ P+  +YN ++ G C    +N A +++  M   G      +++IL
Sbjct: 384 NEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTIL 443

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++GY K  +IE A S++  M    I P       +  GL +  +      LF++    G 
Sbjct: 444 MDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGF 503

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR----AYNSLIDGLCKSGRLE 361
                 Y T IDG  K G I  A  ++  +    CE  I      Y SLIDG CK   ++
Sbjct: 504 VPTCMPYNTIIDGFIKEGNINLASNVYREM----CEVGITPSTVTYTSLIDGFCKGNNID 559

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL+L   +    L  ++  Y  +I G C    M  A +L  ++    + PN   ++ +I
Sbjct: 560 LALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMI 619

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            GF  +N   + I+L  KM    +  D    + ++D L K+
Sbjct: 620 TGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKS 660



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 232/504 (46%), Gaps = 69/504 (13%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D   ++  +  LC +     A +L  ++R  G  P   T+T+++    +  +   AL L 
Sbjct: 192 DQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLK 251

Query: 82  EEMAN--------------------GN-----------GEFGVVCEPNTVTYTTIIDGLC 110
           ++M N                    GN            E G+V  PN VTY+ +IDG C
Sbjct: 252 DDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLV--PNKVTYSVLIDGCC 309

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G ++KA E   +MK K I+ +V +  S++ G+   + W  A  +F + ++ G+  NV 
Sbjct: 310 KNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVF 368

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           TFN ++  LCK GKM+EA  L D +I  G+ P+  +YN ++ G C    +N A +++  M
Sbjct: 369 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 428

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM------------------------- 265
              G      +++IL++GY K  +IE A S++  M                         
Sbjct: 429 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488

Query: 266 ----------LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
                     +S+G  P  + +NT+  G  +   +  A  ++ EM   G+   T TY + 
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 548

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           IDG CK   I  A++L + ++    + DI+AY +LIDG CK   ++ A EL   L    L
Sbjct: 549 IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGL 608

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN   Y+ MI G  N   +++A DL+  M    +  ++ T+  LI G ++        +
Sbjct: 609 SPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASD 668

Query: 436 LLHKMKEINVMPDASIVSIVVDLL 459
           +  +M    ++PD    +++++ L
Sbjct: 669 IHTEMLSKGILPDDRAHTVLINGL 692



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 210/426 (49%), Gaps = 7/426 (1%)

Query: 36  ESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC 95
           E  I+EA   F + +  G E D   Y+  V+ LC   ++  AL+L  EM       G + 
Sbjct: 171 EGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAA----GWI- 225

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
            P   T+T++I    KEG V +A  L   M +     N+   TS+++G+C   +   A  
Sbjct: 226 -PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALV 284

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           L  E+ + G+ PN VT++V++D  CKNG +++A      M   G+R   ++ N++L+G+ 
Sbjct: 285 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 344

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
                 +A  +F      G  + VF+++ L++  CK  ++  A +L+ E+++KGI P+VV
Sbjct: 345 KCQSWQNAFTMFNDALESGLAN-VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVV 403

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N + +G      +  A K++ EM  NG   +  T+   +DG  K G I  A  +FH +
Sbjct: 404 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 463

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +             +I GLCK+GR     +LF        VP  + Y+ +I G   +G +
Sbjct: 464 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNI 523

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           + A +++ +M E  + P+ +T+  LI GF + N     ++LL+ MK   +  D      +
Sbjct: 524 NLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTL 583

Query: 456 VDLLAK 461
           +D   K
Sbjct: 584 IDGFCK 589



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 162/317 (51%), Gaps = 6/317 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + + F +  R+  +   P   T   +IKGLC   R  E   LF K    G  P    Y
Sbjct: 451 GDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPY 510

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G  +  +  +A N++ EM     E G+   P+TVTYT++IDG CK   +D A +L
Sbjct: 511 NTIIDGFIKEGNINLASNVYREMC----EVGIT--PSTVTYTSLIDGFCKGNNIDLALKL 564

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  MK K +K ++  Y ++I GFC  +D   A  L  E+   G+ PN   +N ++     
Sbjct: 565 LNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKN 624

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              ++EA  L   M+  G+  D  TY +L+DG   +GR+ +A ++   M S G      +
Sbjct: 625 MNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA 684

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++LING C   + E A  +  +M  K + P V+I+NTL  G F+   ++ AF+L DEM 
Sbjct: 685 HTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEML 744

Query: 302 RNGVAADTWTYRTFIDG 318
             G+  D  TY   ++G
Sbjct: 745 DRGLVPDNITYDILVNG 761



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 189/402 (47%), Gaps = 23/402 (5%)

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC------------KEGFV 115
           L  ++ T  A  LF++ A+G           +V ++ ++D L             +EG +
Sbjct: 125 LTNSAETHRAQYLFDQFASGK----------SVRFSCLMDRLVECTKLYNFPLDIQEGNI 174

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            +A++  LQ K + ++ +   Y+  +   C   +   A  L  EM   G  P   TF  +
Sbjct: 175 LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSV 234

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +    K G + EA RL D M+  G   +     +L+ G+C+ G +  A  L   +   G 
Sbjct: 235 ITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGL 294

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                +YS+LI+G CKN  IE A   YSEM +KGI+  V   N++  G  +    + AF 
Sbjct: 295 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 354

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +F++   +G+ A+ +T+ T +  LCK G + EA  L+  +       ++ +YN++I G C
Sbjct: 355 MFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 413

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +   +  A ++++ +      PN VT++I++ G    G ++ A  +F  M++  ++P   
Sbjct: 414 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 473

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           T  ++I+G  +     +  +L +K      +P     + ++D
Sbjct: 474 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIID 515



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 6/143 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M  V     +  +++      D  T+TSLI GL    R++ A+ + T++   G  PD   
Sbjct: 625 MNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA 684

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T L+NGLC       A  + E+M   NG+  +   P+ + Y T+I G  KEG + +A  
Sbjct: 685 HTVLINGLCNKGQFENARKILEDM---NGKNMI---PSVLIYNTLIAGHFKEGNLQEAFR 738

Query: 121 LLLQMKDKNIKPNVVTYTSVIRG 143
           L  +M D+ + P+ +TY  ++ G
Sbjct: 739 LHDEMLDRGLVPDNITYDILVNG 761


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/455 (30%), Positives = 238/455 (52%), Gaps = 6/455 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++S   PD VT ++L+ GLC + +  EA ALF ++   G  P+  TY TL++ L +   
Sbjct: 283 MVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARR 342

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              +L L  EM +     GVV +   V YT ++D L KEG +++AK++L   +  NI PN
Sbjct: 343 GSESLGLLGEMVS----RGVVMD--LVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPN 396

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            VTYT ++   C A + + A+++ ++M ++ V PNVVTF+ I++ L K G + +A+  + 
Sbjct: 397 FVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMR 456

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G+ P+  TY TL+DGF        A +++  M   G +   F    L+NG  KN 
Sbjct: 457 KMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNG 516

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            IEGA +L+ +M  +G+  D V + TL  GLF+   +  AFK+  E+    ++ D   Y 
Sbjct: 517 NIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYN 576

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
            FI+ LC  G   EA      +R    E D   YN++I   C+ G+   AL+L + +   
Sbjct: 577 VFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRN 636

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + PN++TY+ ++ GL   G + KA+ L  +M      P  +T   +++       P  +
Sbjct: 637 SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVI 696

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           +E+   M    +  D ++ + +V +L  + ++ N+
Sbjct: 697 LEIHELMMGAGLHADITVYNTLVHVLCCHGMARNA 731



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 237/523 (45%), Gaps = 79/523 (15%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEP-DVFTYTTLVNG 67
           VL  + K   + D VT ++ + GLC    + EAAAL   L R  G +  DV  +  L++G
Sbjct: 137 VLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDG 196

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
            C+      AL + E M       GV  +   V Y +++ G    G  D A E++ +MK 
Sbjct: 197 YCKVQDMAAALAVVERMTTQ----GVALD--VVGYNSLVAGFFHSGDADAALEVVERMKA 250

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
             ++PNVVTYT++I  +C  K  +EA  L+  M+  GV P+VVT + ++D LC++G+  E
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLT------------------------------ 217
           A  L   M + GV P+  TY TL+D                                   
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMD 370

Query: 218 -----GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK---- 268
                G++  AK++    +S        +Y++L++ +C+   I+GA  +  +M  K    
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430

Query: 269 -------------------------------GIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
                                          GI P+VV + TL  G F+    E A  ++
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVY 490

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            +M   GV A+ +   + ++GL KNG I  A  LF  +       D   Y +L+DGL K+
Sbjct: 491 RDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKT 550

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           G +  A ++ + L    L P+ V Y++ I  LC  G+  +A+    +M    + P+  T+
Sbjct: 551 GNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATY 610

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVDLL 459
           + +I    R  + SK ++LL +MK  ++ P+  +  ++VV LL
Sbjct: 611 NTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLL 653



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/529 (26%), Positives = 235/529 (44%), Gaps = 76/529 (14%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R S    +LG ++      D V +T+L+  L  E +I EA  +    +     P+  TYT
Sbjct: 342 RGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYT 401

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LV+  CR  +   A  +  +M     E  V+  PN VT+++II+GL K G + KA + +
Sbjct: 402 VLVDAHCRAGNIDGAEQVLLQME----EKSVI--PNVVTFSSIINGLVKRGCLGKAADYM 455

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN-------------- 168
            +MKD  I PNVVTY ++I GF   +    A  ++ +M+ +GV+ N              
Sbjct: 456 RKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKN 515

Query: 169 ---------------------VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                                 V +  +MD L K G M  A ++   +++  + PDA  Y
Sbjct: 516 GNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVY 575

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N  ++  C  G+ + AK     M + G +    +Y+ +I   C+  +   AL L  EM  
Sbjct: 576 NVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKR 635

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA--------------------- 306
             IKP+++ + TL VGL E   V++A  L +EM   G A                     
Sbjct: 636 NSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDV 695

Query: 307 --------------ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
                         AD   Y T +  LC +G    A  +   +       D   +N+LI 
Sbjct: 696 ILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALIL 755

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G CKS  L+ A  ++  +    L PN+ T++ ++GGL + G++ +A  +  DM++  + P
Sbjct: 756 GHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEP 815

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           N +T+D+L+ G+ + +   + + L  +M     +P AS  + ++   AK
Sbjct: 816 NNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAK 864



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 234/518 (45%), Gaps = 68/518 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     VL ++ +    P+ VTF+S+I GL     + +AA    K++  G  P+V TY
Sbjct: 411 GNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTY 470

Query: 62  TTLVNGLCRTSHTIVALNLFEEM--------------------ANGN-----------GE 90
            TL++G  +      AL+++ +M                     NGN            E
Sbjct: 471 GTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDE 530

Query: 91  FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
            G++ +   V YTT++DGL K G +  A ++  ++ +KN+ P+ V Y   I   C    +
Sbjct: 531 RGLLLD--HVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKF 588

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           +EAK    EM + G++P+  T+N ++   C+ GK  +A +LL  M ++ ++P+  TY TL
Sbjct: 589 SEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTL 648

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFS----------------------------- 241
           + G    G V  AK L   M S G   T  +                             
Sbjct: 649 VVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGL 708

Query: 242 ------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                 Y+ L++  C +     A  +  EML++GI PD +  N L +G  +   ++ AF 
Sbjct: 709 HADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFA 768

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           ++ +M   G++ +  T+ T + GL   G I EA  +   ++ +  E +   Y+ L+ G  
Sbjct: 769 IYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYA 828

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K      AL L+  +     +P   TY+ ++      G M++A++LF +M+   V+    
Sbjct: 829 KKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSS 888

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           T+D+L+ G+ ++    +V  LL  MKE+   P    +S
Sbjct: 889 TYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTIS 926



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 218/473 (46%), Gaps = 39/473 (8%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V++   +  L  +     A  + +++   G   D  T +T + GLCRT     A  L 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           E +  G G  G+    + V +  +IDG CK   +  A  ++ +M  + +  +VV Y S++
Sbjct: 174 EMLVRGRGIDGL----DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLV 229

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GF ++ D + A  +   M   GV+PNVVT+  ++ E CK   MDEA  L + M++ GV 
Sbjct: 230 AGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVL 289

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  T + L+DG C  G+ + A  LF  M+ +G      +Y  LI+   K +    +L L
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM+S+G+  D+V++  L   L +  ++E A  +    Q + +  +  TY   +D  C+
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCR 409

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G I  A ++   +       ++  ++S+I+GL K G L  A +  R +    + PNVVT
Sbjct: 410 AGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVT 469

Query: 382 YSIMI-----------------------------------GGLCNDGQMDKARDLFLDME 406
           Y  +I                                    GL  +G ++ A  LF DM+
Sbjct: 470 YGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMD 529

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           E  ++ + + +  L+ G  +        ++  ++ E N+ PDA + ++ ++ L
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCL 582



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 213/482 (44%), Gaps = 41/482 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S  + +   + K    P+ VT+ +LI  L    R  E+  L  ++   G   D+  Y
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++ L +      A ++     + N        PN VTYT ++D  C+ G +D A+++
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDN------ITPNFVTYTVLVDAHCRAGNIDGAEQV 419

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           LLQM++K++ PNVVT++S+I G        +A     +M D G+ PNVVT+  ++D   K
Sbjct: 420 LLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFK 479

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
               + A  +   M+  GV  + F  ++L++G    G +  A+ LF  M+  G      +
Sbjct: 480 FQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVN 539

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G  K   +  A  +  E++ K + PD V++N     L  + +   A     EM+
Sbjct: 540 YTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMR 599

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG--- 358
             G+  D  TY T I   C+ G   +A++L   ++    + ++  Y +L+ GL ++G   
Sbjct: 600 NTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVK 659

Query: 359 --------------------------------RLEIALELFRSLPCGVLVPNVVTYSIMI 386
                                           R ++ LE+   +    L  ++  Y+ ++
Sbjct: 660 KAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLV 719

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             LC  G    A  +  +M    + P+ ITF+ LI G  + +       +  +M    + 
Sbjct: 720 HVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLS 779

Query: 447 PD 448
           P+
Sbjct: 780 PN 781



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 166/370 (44%), Gaps = 6/370 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+ S     L  +  +   PD  T+ ++I   C E +  +A  L  +++    +P++ T
Sbjct: 585 LGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLIT 644

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTLV GL        A  L  EMA+          P ++T+  ++         D   E
Sbjct: 645 YTTLVVGLLEAGVVKKAKFLLNEMASAG------FAPTSLTHQRVLQACSGSRRPDVILE 698

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    +  ++  Y +++   C       A  +  EM+ +G+ P+ +TFN ++   C
Sbjct: 699 IHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHC 758

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+  +D A  +   M+  G+ P+  T+NTLL G    GR+  A  +   M+ +G +    
Sbjct: 759 KSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNL 818

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y IL+ GY K      AL LY EM+SKG  P    +N+L     +   + +A +LF EM
Sbjct: 819 TYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEM 878

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +R GV   + TY   ++G  K    +E   L   ++ L  +      +S+     + G  
Sbjct: 879 KRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMT 938

Query: 361 EIALELFRSL 370
             A  L ++L
Sbjct: 939 GEARRLLKTL 948



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 160/361 (44%), Gaps = 44/361 (12%)

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLF----IEMMDQGVQPNVVTFNVIMDELCKNG 183
           + +  + +T  S+I  +C  +    A  L            V  + V++N+ +  L + G
Sbjct: 70  RPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQG 129

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK---ELFVSMESMGCKHTVF 240
               A  +L  M + GV  D  T +T L G C TG V  A    E+ V    +     V 
Sbjct: 130 HGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVV- 188

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            ++ LI+GYCK +++  AL++   M ++G+  DVV +N+L  G F     + A ++ + M
Sbjct: 189 GWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERM 248

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           + +GV  +  TY   I   CK   + EA  L+                   +G+ +SG  
Sbjct: 249 KADGVEPNVVTYTALIGEYCKGKGMDEAFSLY-------------------EGMVRSG-- 287

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
                         ++P+VVT S ++ GLC DGQ  +A  LF +M++  V PN +T+  L
Sbjct: 288 --------------VLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTL 333

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           I    +    S+ + LL +M    V+ D  + + ++D L K E  +        H Q + 
Sbjct: 334 IDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGK-EGKIEEAKDVLRHAQSDN 392

Query: 481 V 481
           +
Sbjct: 393 I 393



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           + + F +  ++L    +P+  TF +L+ GL +  RI EA  + + ++  G EP+  TY  
Sbjct: 763 LDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDI 822

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           LV G  + S+ + AL L+ EM +     G +  P   TY +++    K G +++AKEL  
Sbjct: 823 LVTGYAKKSNKVEALRLYCEMVSK----GFI--PKASTYNSLMSDFAKAGMMNQAKELFS 876

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +MK + +     TY  ++ G+   ++  E + L  +M + G +P+  T + +     + G
Sbjct: 877 EMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPG 936

Query: 184 KMDEASRLLDLMIQ 197
              EA RLL  + +
Sbjct: 937 MTGEARRLLKTLFK 950


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/420 (31%), Positives = 229/420 (54%), Gaps = 9/420 (2%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
            + F +    L+S    +  TF +L+  LC E ++ EA  L+ ++   G  P+V +Y  +
Sbjct: 232 QNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 290

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           + G CR  +   A  +++EM + NG       PN VT+T ++DG  K+G ++ A  +  +
Sbjct: 291 ILGHCRKDNINAACKVYKEMLD-NG-----FTPNAVTFTILMDGYFKKGDIENAFSIFHR 344

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           MKD NI P   T   +I+G C A    E + LF + + QG  P  + +N I+D   K G 
Sbjct: 345 MKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 404

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           ++ AS +   M + G+ P   TY +L+DGFC    ++ A +L   M+  G K  + +Y  
Sbjct: 405 INLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT 464

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI+G+CK ++++ A  L +E+   G+ P+  I+N++  G   ++ VE A  L+ +M   G
Sbjct: 465 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 524

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF-DIRAYNSLIDGLCKSGRLEIA 363
           +  D  TY + IDGL K+G ++ A ++ HT  + K    D RA+  LI+GLC  G+ E A
Sbjct: 525 IPCDLKTYTSLIDGLLKSGRLLYASDI-HTEMLSKGILPDDRAHTVLINGLCNKGQFENA 583

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++   +    ++P+V+ Y+ +I G   +G + +A  L  +M +  +VP+ IT+D+L+ G
Sbjct: 584 RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 242/491 (49%), Gaps = 42/491 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    V++  I +S   P+ VT++ LI G C    I +A   +++++  G    V++ 
Sbjct: 159 GNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSL 218

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++ G  +      A  +F +      E G+    N  T+ T++  LCKEG +++A  L
Sbjct: 219 NSILEGYLKCQSWQNAFTMFNDAL----ESGLA---NVFTFNTLLSWLCKEGKMNEACNL 271

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE--- 178
             ++  K I PNVV+Y ++I G C   + N A +++ EM+D G  PN VTF ++MD    
Sbjct: 272 WDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFK 331

Query: 179 --------------------------------LCKNGKMDEASRLLDLMIQHGVRPDAFT 206
                                           LCK G+  E   L +  +  G  P    
Sbjct: 332 KGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP 391

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YNT++DGF   G +N A  ++  M  +G   +  +Y+ LI+G+CK   I+ AL L ++M 
Sbjct: 392 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 451

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            KG+K D+  + TL  G  +   ++ A +L +E++  G++ + + Y + I G      + 
Sbjct: 452 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 511

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA++L+  +       D++ Y SLIDGL KSGRL  A ++   +    ++P+   ++++I
Sbjct: 512 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 571

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLCN GQ + AR +  DM    ++P+V+ ++ LI G  +     +   L  +M +  ++
Sbjct: 572 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 631

Query: 447 PDASIVSIVVD 457
           PD     I+V+
Sbjct: 632 PDNITYDILVN 642



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 235/490 (47%), Gaps = 42/490 (8%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
            +   +L  +  + + P   TFTS+I     E  + EA  L   +   G   ++   T+L
Sbjct: 92  GYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSL 151

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           + G C   +   AL L  E++    E G+V  PN VTY+ +IDG CK G ++KA E   +
Sbjct: 152 MKGYCMQGNLRSALVLVNEIS----ESGLV--PNKVTYSVLIDGCCKNGNIEKAFEFYSE 205

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           MK K I+ +V +  S++ G+   + W  A  +F + ++ G+  NV TFN ++  LCK GK
Sbjct: 206 MKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGK 264

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           M+EA  L D +I  G+ P+  +YN ++ G C    +N A +++  M   G      +++I
Sbjct: 265 MNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTI 324

Query: 245 LINGYCKNKEIEGALSLYSEM-----------------------------------LSKG 269
           L++GY K  +IE A S++  M                                   +S+G
Sbjct: 325 LMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQG 384

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
             P  + +NT+  G  +   +  A  ++ EM   G+   T TY + IDG CK   I  A+
Sbjct: 385 FVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLAL 444

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           +L + ++    + DI+AY +LIDG CK   ++ A EL   L    L PN   Y+ MI G 
Sbjct: 445 KLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGF 504

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
            N   +++A DL+  M    +  ++ T+  LI G ++        ++  +M    ++PD 
Sbjct: 505 KNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDD 564

Query: 450 SIVSIVVDLL 459
              +++++ L
Sbjct: 565 RAHTVLINGL 574



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 216/442 (48%), Gaps = 7/442 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           T D  T   +++    E  I+EA   F + +  G E D   Y+  V+ LC   ++  AL+
Sbjct: 37  TGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALS 96

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L  EM       G +  P   T+T++I    KEG V +A  L   M +     N+   TS
Sbjct: 97  LLREMRAA----GWI--PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATS 150

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +++G+C   +   A  L  E+ + G+ PN VT++V++D  CKNG +++A      M   G
Sbjct: 151 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 210

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           +R   ++ N++L+G+       +A  +F      G  + VF+++ L++  CK  ++  A 
Sbjct: 211 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLAN-VFTFNTLLSWLCKEGKMNEAC 269

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +L+ E+++KGI P+VV +N + +G      +  A K++ EM  NG   +  T+   +DG 
Sbjct: 270 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 329

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K G I  A  +FH ++             +I GLCK+GR     +LF        VP  
Sbjct: 330 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 389

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           + Y+ +I G   +G ++ A +++ +M E  + P+ +T+  LI GF + N     ++LL+ 
Sbjct: 390 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 449

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           MK   +  D      ++D   K
Sbjct: 450 MKRKGLKMDIKAYGTLIDGFCK 471



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 162/317 (51%), Gaps = 6/317 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + + F +  R+  +   P   T   +IKGLC   R  E   LF K    G  P    Y
Sbjct: 333 GDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPY 392

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G  +  +  +A N++ EM     E G+   P+TVTYT++IDG CK   +D A +L
Sbjct: 393 NTIIDGFIKEGNINLASNVYREMC----EVGIT--PSTVTYTSLIDGFCKGNNIDLALKL 446

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  MK K +K ++  Y ++I GFC  +D   A  L  E+   G+ PN   +N ++     
Sbjct: 447 LNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKN 506

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              ++EA  L   M+  G+  D  TY +L+DG   +GR+ +A ++   M S G      +
Sbjct: 507 MNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA 566

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++LING C   + E A  +  +M  K + P V+I+NTL  G F+   ++ AF+L DEM 
Sbjct: 567 HTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEML 626

Query: 302 RNGVAADTWTYRTFIDG 318
             G+  D  TY   ++G
Sbjct: 627 DRGLVPDNITYDILVNG 643



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 186/402 (46%), Gaps = 7/402 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P +     L+  + R + T  A  L  +M        V    +  T   ++    KEG +
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKM------LLVGVTGDCFTLHVMLRACLKEGNI 56

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            +A++  LQ K + ++ +   Y+  +   C   +   A  L  EM   G  P   TF  +
Sbjct: 57  LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSV 116

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +    K G + EA RL D M+  G   +     +L+ G+C+ G +  A  L   +   G 
Sbjct: 117 ITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGL 176

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                +YS+LI+G CKN  IE A   YSEM +KGI+  V   N++  G  +    + AF 
Sbjct: 177 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 236

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +F++   +G+ A+ +T+ T +  LCK G + EA  L+  +       ++ +YN++I G C
Sbjct: 237 MFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 295

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +   +  A ++++ +      PN VT++I++ G    G ++ A  +F  M++  ++P   
Sbjct: 296 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 355

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           T  ++I+G  +     +  +L +K      +P     + ++D
Sbjct: 356 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIID 397



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 6/143 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M  V     +  +++      D  T+TSLI GL    R++ A+ + T++   G  PD   
Sbjct: 507 MNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA 566

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T L+NGLC       A  + E+M   NG+  +   P+ + Y T+I G  KEG + +A  
Sbjct: 567 HTVLINGLCNKGQFENARKILEDM---NGKNMI---PSVLIYNTLIAGHFKEGNLQEAFR 620

Query: 121 LLLQMKDKNIKPNVVTYTSVIRG 143
           L  +M D+ + P+ +TY  ++ G
Sbjct: 621 LHDEMLDRGLVPDNITYDILVNG 643



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 75/207 (36%), Gaps = 35/207 (16%)

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           + P +   N L   +   +    A +L ++M   GV  D +T    +    K G I+EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP------------ 377
           + F   +    E D  AY+  +  LC       AL L R +     +P            
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 378 -----------------------NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
                                  N+   + ++ G C  G +  A  L  ++ E+ +VPN 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMK 441
           +T+ +LI G  +     K  E   +MK
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMK 207


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 218/408 (53%), Gaps = 9/408 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P A +   L+  L A  R+  A   F         PD+FT+  +++GLC+T     A ++
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK---AKELLLQMKDKNIKPNVVTY 137
            +++      +G+   P+ VTY TIIDG CK G   +      LL +M +  I PN VT+
Sbjct: 208 AKDIR----AWGLA--PSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTF 261

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             ++ G+C   +   A R+F EM  QG+  +VVT++ ++  LC  GK++E  +L+D M  
Sbjct: 262 NVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKD 321

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ P+  T N++L+GFC  G +  A+    SME    K  V +Y+IL++GY +  +++ 
Sbjct: 322 LGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKD 381

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           AL++   M  KG++P+  I+N L  G            L DEM+  GV AD  TY   I 
Sbjct: 382 ALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIG 441

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC  G + +AV+L   + ++  E     YN++I+G C+ G ++ A E+   +  G    
Sbjct: 442 ALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRA 501

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           NVVTY++ I  LC  G+M++  +L  +M E  +VPN +T+D +  G +
Sbjct: 502 NVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMM 549



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 190/388 (48%), Gaps = 9/388 (2%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC---RT 71
           L+   +PD  TF  +I GLC   ++ +A  +   +R +G  P V TY T+++G C   R 
Sbjct: 177 LRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRA 236

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                   L +EM     E G+   PN VT+  +++G CK+     A  +  +MK + I 
Sbjct: 237 GRMYHVDALLKEMV----EAGI--SPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIA 290

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
            +VVTY++++ G C      E  +L  EM D G+ PN+ T N +++  CK G M +A   
Sbjct: 291 ASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGW 350

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           +D M Q  V+P+  TY  L+DG+    ++  A  +  +M   G +     Y+ LI G+ +
Sbjct: 351 IDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTR 410

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           N +      L  EM  KG++ D+V +N L   L    +V +A KL DEM   G+     T
Sbjct: 411 NGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLT 470

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I+G C+ G I  A E+   +   K   ++  YN  I  LC+ G++E   EL   + 
Sbjct: 471 YNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEML 530

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              LVPN VTY  +  G+   G     R
Sbjct: 531 EKGLVPNGVTYDTIKEGMMEKGYTPDVR 558



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 166/323 (51%), Gaps = 6/323 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+ H   +L  ++++  +P+ VTF  L+ G C +S    A  +F +++  G    V TY
Sbjct: 237 GRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTY 296

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + LV GLC        + L +EM     + G+V  PN  T  ++++G CK+G +  A+  
Sbjct: 297 SALVWGLCSEGKVEEGVKLVDEMK----DLGLV--PNLATLNSVLNGFCKKGMMTDAEGW 350

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M+ KN+KPNVVTYT ++ G+       +A  +   M  +GV+PN   +N ++    +
Sbjct: 351 IDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTR 410

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG     S LLD M   GVR D  TYN L+   C+ G V  A +L   M  +G +    +
Sbjct: 411 NGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLT 470

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +INGYC+   I+ A  + + M     + +VV +N     L  + ++E   +L +EM 
Sbjct: 471 YNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEML 530

Query: 302 RNGVAADTWTYRTFIDGLCKNGY 324
             G+  +  TY T  +G+ + GY
Sbjct: 531 EKGLVPNGVTYDTIKEGMMEKGY 553



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 158/320 (49%), Gaps = 3/320 (0%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +P+  +   ++     A+  + A+R F   + + V P++ TFN+++  LCK G++ +A  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN---HAKELFVSMESMGCKHTVFSYSILIN 247
           +   +   G+ P   TYNT++DG+C  GR     H   L   M   G      ++++L+N
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           GYCK+     A+ ++ EM  +GI   VV ++ L  GL    +VE   KL DEM+  G+  
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  T  + ++G CK G + +A     ++     + ++  Y  L+DG  +  +++ AL + 
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            ++    + PN   Y+ +I G   +G       L  +M    V  +++T+++LI      
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446

Query: 428 NEPSKVIELLHKMKEINVMP 447
            E  K ++LL +M  + + P
Sbjct: 447 GEVRKAVKLLDEMLMVGLEP 466



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 148/298 (49%), Gaps = 5/298 (1%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +P+  + N ++  L    ++D A R     ++  V PD FT+N ++ G C TG++  A +
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL----SLYSEMLSKGIKPDVVIHNTLF 281
           +   + + G   +V +Y+ +I+GYCK     G +    +L  EM+  GI P+ V  N L 
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGR-AGRMYHVDALLKEMVEAGISPNEVTFNVLV 265

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G  +      A ++F+EM++ G+AA   TY   + GLC  G + E V+L   ++ L   
Sbjct: 266 NGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLV 325

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++   NS+++G CK G +  A     S+    + PNVVTY+I++ G     +M  A  +
Sbjct: 326 PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAV 385

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
              M    V PN   ++ LI GF R  +   V  LL +M+   V  D    ++++  L
Sbjct: 386 KEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGAL 443


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 226/447 (50%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     ++  ++     P  VT+ S++KGL    R  +A  +F  +   G  PDV ++
Sbjct: 208 GDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSF 267

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G CR      AL  ++EM       G    P+ V+++ +I    + G +D A E 
Sbjct: 268 NMLIGGFCRAGELEEALRFYKEMR------GRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M++  + P+ V YT VI GFC A    EA R+  EM+  G  P+VVT+N +++ LCK
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK 381

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ +A  LL+ M + GV PD  T+ TL+ G+C  G +  A + F ++     +  + +
Sbjct: 382 ERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVT 441

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G C+  ++  A  L+ +M S+ I P+ V ++ L     E  QV+ AF   DEM 
Sbjct: 442 YNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV 501

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY + I G C++G + +  +    +R  K   D+  YN+LI G  K G++ 
Sbjct: 502 NKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMH 561

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L + +    + P+ VTY+++I G    G M +A  ++  M    + P+  T+  +I
Sbjct: 562 EAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMI 621

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G +      K  +L  +M +  + PD
Sbjct: 622 NGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 230/469 (49%), Gaps = 19/469 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L S    +  T   ++   C   +  E   + +++      PDV T+  +V+   R   
Sbjct: 150 VLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGD 209

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A+ L + M +         +P  VTY +++ GL + G  DKA+E+   M    + P+
Sbjct: 210 VEAAMALIDSMVSKG------IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPD 263

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V ++  +I GFC A +  EA R + EM  + V P+VV+F+ ++    + G+MD A+  L 
Sbjct: 264 VRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR 323

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M + G+ PD   Y  ++ GFC  G +  A  +   M + GC   V +Y+ L+NG CK +
Sbjct: 324 EMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKER 383

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            +  A  L +EM  +G+ PD+    TL  G      +E+A + FD +    +  D  TY 
Sbjct: 384 RLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYN 443

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T IDG+C+ G + +A EL+  +   +   +   Y+ LID  C+ G+++ A      +   
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK 503

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            +VPN++TY+ +I G C  G + K +     M  + V+P++IT++ LI G+++  +  + 
Sbjct: 504 GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
             LL  M+  NV PDA   ++++               F+VH   +E D
Sbjct: 564 FNLLKIMENENVQPDAVTYNMIIS-------------GFSVHGNMQEAD 599



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 210/474 (44%), Gaps = 41/474 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++  +L S  TP    F  LI+      +  EA   F  L              L+  L 
Sbjct: 76  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALS 135

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R     +  + +  + + N E       NT T   ++   CK     +   ++ +M+ + 
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEV------NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRC 189

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+VVT+  ++     A D   A  L   M+ +G++P +VT+N ++  L +NG+ D+A 
Sbjct: 190 VFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAR 249

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +   M   GV PD  ++N L+ GFC  G +  A   +  M        V S+S LI  +
Sbjct: 250 EVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLF 309

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +  E++ A     EM   G+ PD VI+  +  G      +  A ++ DEM   G   D 
Sbjct: 310 TRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDV 369

Query: 310 WTYRTFIDGLCK-----------------------------------NGYIVEAVELFHT 334
            TY T ++GLCK                                   +G I +A++ F T
Sbjct: 370 VTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDT 429

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +   +   DI  YN+LIDG+C+ G L  A EL+  +    + PN VTYSI+I   C  GQ
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ 489

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +D A     +M    +VPN++T++ +I+G+ R    SK  + L KM+   VMPD
Sbjct: 490 VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 148/311 (47%), Gaps = 2/311 (0%)

Query: 153 AKRLFI--EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           A RL I   ++     P    F++++    ++ K  EA     L++ H V   A   N L
Sbjct: 71  ASRLDIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNAL 130

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           L      G  +   + +  + S   +   ++ +I+++ YCK  +     ++ SEM  + +
Sbjct: 131 LAALSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCV 190

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            PDVV HN +    F    VE A  L D M   G+     TY + + GL +NG   +A E
Sbjct: 191 FPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKARE 250

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +F  +       D+R++N LI G C++G LE AL  ++ +    + P+VV++S +IG   
Sbjct: 251 VFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFT 310

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             G+MD A +   +M E  ++P+ + + M+I GF R     + + +  +M     +PD  
Sbjct: 311 RRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVV 370

Query: 451 IVSIVVDLLAK 461
             + +++ L K
Sbjct: 371 TYNTLLNGLCK 381


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 245/486 (50%), Gaps = 39/486 (8%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V    V+L  +L+   +P+  T+T LI+GLC E RI +A  L  ++   G  P V+TY  
Sbjct: 269 VREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNA 328

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           +++G C++     AL + + +  GNG     C P+  TY ++I GLC  G  D+A+ELL 
Sbjct: 329 MIDGYCKSGRLKDALGI-KTLMEGNG-----CNPDDWTYNSLIHGLCG-GKPDEAEELLN 381

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
               +   P V+T+T++I G+C A+  ++A R+   M+    + ++  + V++  L K  
Sbjct: 382 GAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKH 441

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++ EA   L+ +  +G+ P+   Y +++D +C  G+V  A E+F   E  GC+   ++YS
Sbjct: 442 RLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYS 501

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI G  +++++  A++L ++M   GI P V+ + TL  G  + H+ + AF+LF+ M++N
Sbjct: 502 SLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQN 561

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVEL---------------------------FHTLR 336
           G+  D   Y    D LCK+G   EA                              F    
Sbjct: 562 GLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAAL 621

Query: 337 ILK-----CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           I K     C+ D   Y+ L+  LCK  +L  AL +   +    +  N+V Y+I+I  +  
Sbjct: 622 IEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIK 681

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G+ D A+ +F +M  +   P+ IT+ + I  + +I    +   L+ +M+   V PD   
Sbjct: 682 EGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVT 741

Query: 452 VSIVVD 457
            ++ ++
Sbjct: 742 YNVFIN 747



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/434 (31%), Positives = 220/434 (50%), Gaps = 7/434 (1%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           H   +  ++++    PD VT+ ++I   C E  +  A   F  LR  G E D +T   L+
Sbjct: 166 HMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALL 225

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
            G CRT     A  L   M        + C  N  +YT +I GLC+   V +A  LLL M
Sbjct: 226 LGYCRTGDLRKACWLLMMMPL------MGCRRNEYSYTILIQGLCETRCVREALVLLLMM 279

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
                 PN+ TYT +IRG C     ++A+ L  EM  +GV P+V T+N ++D  CK+G++
Sbjct: 280 LQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRL 339

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
            +A  +  LM  +G  PD +TYN+L+ G C  G+ + A+EL     + G   TV +++ +
Sbjct: 340 KDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNI 398

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           INGYCK ++I+ AL + S M+S   K D+  +  L   L + H+++ A    +E+  NG+
Sbjct: 399 INGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGL 458

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
           + +   Y + ID  CK G +  A+E+F       C  +   Y+SLI GL +  +L  A+ 
Sbjct: 459 SPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMA 518

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           L   +    + P V+TY+ +I G C   + D A  LF  ME+N + P+   +++L     
Sbjct: 519 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 578

Query: 426 RINEPSKVIELLHK 439
           +     +    L K
Sbjct: 579 KSGRAEEAYSFLVK 592



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 205/418 (49%), Gaps = 7/418 (1%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
           L+++L   G  PD  TY T++   C+     +A   F  +     E       +T T   
Sbjct: 170 LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEM------DTYTCNA 223

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           ++ G C+ G + KA  LL+ M     + N  +YT +I+G C  +   EA  L + M+  G
Sbjct: 224 LLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDG 283

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
             PN+ T+ +++  LCK G++ +A  LLD M + GV P  +TYN ++DG+C +GR+  A 
Sbjct: 284 CSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDAL 343

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            +   ME  GC    ++Y+ LI+G C  K  E A  L +  +++G  P V+    +  G 
Sbjct: 344 GIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDE-AEELLNGAIARGFSPTVITFTNIINGY 402

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +  +++ A ++   M  +    D   Y   I  L K   + EA +  + +       ++
Sbjct: 403 CKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNV 462

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y S+ID  CK G++  ALE+F+        PN  TYS +I GL  D ++ KA  L   
Sbjct: 463 VIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 522

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           M+E+ + P VIT+  LI+G  + +E      L   M++  + PD    +++ D L K+
Sbjct: 523 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKS 580



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 230/489 (47%), Gaps = 62/489 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T++SLI GL  + ++ +A AL TK++  G  P V TYTTL+ G C+      A  L
Sbjct: 495 PNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRL 554

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE M   NG       P+   Y  + D LCK G  ++A   L++   K +    VTYTS+
Sbjct: 555 FEMMEQ-NG-----LTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTSL 605

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GF  A +   A  L  +M+++G + +  T++V++  LCK  K++EA  +LD M   GV
Sbjct: 606 VDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGV 665

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + +   Y  ++      G+ +HAK +F  M S G K +  +Y++ I+ YCK   IE A  
Sbjct: 666 KGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGH 725

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY----RTFI 316
           L  EM   G+ PDVV +N    G   +  ++ AF     M       + WTY    + F+
Sbjct: 726 LIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFL 785

Query: 317 DGLCKNGYIVEAVELFHTL----------RILKCEFDIRA--YNSLIDGLCKSGRLEIA- 363
                N + V+   +++ +          R++K   +  A  Y+S+I G CK+ RLE A 
Sbjct: 786 KMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEAC 845

Query: 364 ---------------------------LELFRS--------LPCGVLVPNVVTYSIMIGG 388
                                      ++LF          + CG   P++ +Y  +I G
Sbjct: 846 VLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECG-FQPHLESYHYLITG 904

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC++G  DKA+ LF D+ E     N + + +L  G ++        +LL  M+  +   D
Sbjct: 905 LCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRID 964

Query: 449 ASIVSIVVD 457
           +   S+V +
Sbjct: 965 SETYSMVTN 973



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 157/307 (51%), Gaps = 1/307 (0%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +L+ +++ +G+ P+ VT+N ++   CK G +  A R   L+ + G+  D +T N LL G+
Sbjct: 169 KLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGY 228

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C TG +  A  L + M  MGC+   +SY+ILI G C+ + +  AL L   ML  G  P++
Sbjct: 229 CRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNL 288

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +  L  GL +  ++  A  L DEM R GV    WTY   IDG CK+G + +A+ +   
Sbjct: 289 HTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTL 348

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C  D   YNSLI GLC  G+ + A EL          P V+T++ +I G C   +
Sbjct: 349 MEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEK 407

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D A  +   M  +    ++  + +LI   I+ +   +  + L+++    + P+  I + 
Sbjct: 408 IDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTS 467

Query: 455 VVDLLAK 461
           ++D   K
Sbjct: 468 IIDAYCK 474



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 169/404 (41%), Gaps = 63/404 (15%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+TSL+ G         AAAL  K+   GC+ D  TY+ L+  LC+      AL++ ++
Sbjct: 600 VTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQ 659

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M       GV  + N V YT II  + KEG  D AK +  +M     KP+ +TYT  I  
Sbjct: 660 MT----LRGV--KGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISS 713

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV--------------------IMDELCKNG 183
           +C      EA  L  EM   GV P+VVT+NV                    ++D  C+  
Sbjct: 714 YCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPN 773

Query: 184 -------------------------------KMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
                                          K+D   +LL+ M++HG+ P A TY++++ 
Sbjct: 774 YWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIA 833

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           GFC   R+  A  L   M           Y++LI   C  K  E A S  + M+  G +P
Sbjct: 834 GFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQP 893

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
            +  ++ L  GL +    ++A  LF ++       +   ++   DGL K G++    +L 
Sbjct: 894 HLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLL 953

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
             +    C  D   Y+ + + + +      A  ++ S  C  LV
Sbjct: 954 SAMENRHCRIDSETYSMVTNNIHE------ASGMYESYMCAPLV 991



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 22/288 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+  H   +   ++ S   P A+T+T  I   C   RI EA  L  ++   G  PDV TY
Sbjct: 683 GKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTY 742

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF------- 114
              +NG     +   A +  + M + +      CEPN  TY  ++    K          
Sbjct: 743 NVFINGCGHMGYMDCAFSTLKRMIDAS------CEPNYWTYWLLLKHFLKMSLANAHYVD 796

Query: 115 ---------VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
                    +D   +LL +M    + P  VTY+S+I GFC A    EA  L   M+ + +
Sbjct: 797 TSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDI 856

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN   + +++   C     ++A+  +  MI+ G +P   +Y+ L+ G C  G  + AK 
Sbjct: 857 SPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKA 916

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           LF  +  M   H   ++ IL +G  K   ++    L S M ++  + D
Sbjct: 917 LFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRID 964



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 84/186 (45%)

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N     L      E   KL+ ++ + G+  DT TY T I   CK G +  A   F  LR
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E D    N+L+ G C++G L  A  L   +P      N  +Y+I+I GLC    + 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A  L L M ++   PN+ T+ +LIRG  +         LL +M    V+P     + ++
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 457 DLLAKN 462
           D   K+
Sbjct: 331 DGYCKS 336



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 45/203 (22%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           + +L R++K    P AVT++S+I G C  +R+ EA  L   +      P+   YT L+  
Sbjct: 810 WQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKC 869

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVC--EPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
            C        + LFE+ A+      + C  +P+  +Y  +I GLC EG  DKAK      
Sbjct: 870 CCD-------IKLFEKAASFVTNM-IECGFQPHLESYHYLITGLCDEGDYDKAKA----- 916

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
                                         LF ++++     N V + ++ D L K G +
Sbjct: 917 ------------------------------LFCDLLEMDYNHNEVAWKILNDGLLKAGHV 946

Query: 186 DEASRLLDLMIQHGVRPDAFTYN 208
           D  S+LL  M     R D+ TY+
Sbjct: 947 DICSQLLSAMENRHCRIDSETYS 969



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 3/117 (2%)

Query: 327 EAVELFHTLRIL---KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
           EAV+    +R     +     + YN  +  L +    E   +L+  L    L+P+ VTY+
Sbjct: 128 EAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYN 187

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            MI   C +G +  A   F  + E+ +  +  T + L+ G+ R  +  K   LL  M
Sbjct: 188 TMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMM 244


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 236/448 (52%), Gaps = 14/448 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+ +TF  +IK +C    + +A  +F  + V  C+PDV+TY TL++GLC+      A++
Sbjct: 166 SPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVS 225

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +EM          C P+ VT+  +I+GLCK+G + +  +L+  M  K   PN VTY +
Sbjct: 226 LLDEMQIDG------CFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNT 279

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C      +A  L   M+     PNVVT+  I++ L K G+  + +R+L LM + G
Sbjct: 280 LIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERG 339

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
              + + Y+ L+ G    G+   A +LF  M    C+     YS +I+G C++ + + AL
Sbjct: 340 YHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEAL 399

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + SEM +   KP+   +++L  G FE     +A +++ +M ++    +   Y   I GL
Sbjct: 400 EVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGL 459

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL--VP 377
           CK+G + EA+ ++  +    C+ D+ AY S+I+GL  +G +E AL+L+  + C      P
Sbjct: 460 CKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQP 519

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI-RINEPSKVIEL 436
           +VVTY+I++  LC    + +A DL   M +    P+++T  + +R    +++ P    E 
Sbjct: 520 DVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREF 579

Query: 437 LHK-----MKEINVMPDASIVSIVVDLL 459
           L       +K   V+  + IV +++  L
Sbjct: 580 LDGLVVRLLKRQRVLGASKIVEVMLQKL 607



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 229/453 (50%), Gaps = 15/453 (3%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTYTTLVNGLCRTS 72
           +++ CF    V F +  K    E    +A  LF ++   F C+  V ++ +++N + +  
Sbjct: 93  VVEKCFV---VIFKAYGKAHLPE----KAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEG 145

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               AL  +  +    G  GV   PN +T+  +I  +CK G VD A ++   M     +P
Sbjct: 146 LFYRALEFYNHVI---GAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQP 202

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +V TY +++ G C A   +EA  L  EM   G  P+ VTFNV+++ LCK G +   ++L+
Sbjct: 203 DVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLV 262

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M   G  P+  TYNTL+ G CL G++  A  L   M S  C   V +Y  +ING  K 
Sbjct: 263 DNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQ 322

Query: 253 -KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            + ++GA  L + M  +G   +  +++ L  GLF+  + + A +LF EM       +T  
Sbjct: 323 GRALDGARVL-ALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIV 381

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   IDGLC++G   EA+E+   +   +C+ +   Y+SL+ G  ++G    A+E+++ + 
Sbjct: 382 YSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMA 441

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                 N V YS++I GLC DG++ +A  ++  M      P+V+ +  +I G        
Sbjct: 442 KHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVE 501

Query: 432 KVIELLHKM--KEINVMPDASIVSIVVDLLAKN 462
             ++L ++M  +E +  PD    +I+++ L K 
Sbjct: 502 DALQLYNEMLCQEPDSQPDVVTYNILLNALCKQ 534



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 206/413 (49%), Gaps = 8/413 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL---LLQMKDKNIKPN 133
           A+ LF+ MA     +   C+    ++ ++++ + +EG   +A E    ++  K  NI PN
Sbjct: 114 AVGLFDRMA-----YEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPN 168

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V+T+  VI+  C     ++A ++F +M     QP+V T+  +MD LCK  ++DEA  LLD
Sbjct: 169 VLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLD 228

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G  P   T+N L++G C  G +    +L  +M   GC     +Y+ LI+G C   
Sbjct: 229 EMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKG 288

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           ++E A+SL   M+S    P+VV + T+  GL +  +     ++   M+  G   + + Y 
Sbjct: 289 KLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYS 348

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I GL K G   EA++LF  + + +CE +   Y+++IDGLC+ G+ + ALE+   +   
Sbjct: 349 ALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNN 408

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              PN  TYS ++ G    G   KA +++ DM ++    N + + +LI G  +  +  + 
Sbjct: 409 RCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 468

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNV 486
           + +  +M      PD      +++ L+   +  ++L  +     QE   + +V
Sbjct: 469 MMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDV 521



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 176/352 (50%), Gaps = 29/352 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L R++ S   P+ VT+ ++I GL  + R ++ A +   +   G   + + Y
Sbjct: 288 GKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVY 347

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +   +  A+ LF+EM          CE NT+ Y+ +IDGLC++G  D+A E+
Sbjct: 348 SALISGLFKEGKSQEAMQLFKEMTVKE------CELNTIVYSAVIDGLCRDGKPDEALEV 401

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +   KPN  TY+S+++GF  A + ++A  ++ +M       N V ++V++  LCK
Sbjct: 402 LSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCK 461

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTV 239
           +GK+ EA  +   M+  G +PD   Y ++++G    G V  A +L+  M  +    +  V
Sbjct: 462 DGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDV 521

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV---------------------IHN 278
            +Y+IL+N  CK   I  A+ L + ML +G  PD+V                       +
Sbjct: 522 VTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLD 581

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            L V L +  +V  A K+ + M +  +     T+   ++ LC    +  A++
Sbjct: 582 GLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQ 633


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/447 (33%), Positives = 226/447 (50%), Gaps = 21/447 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L S  +P+ VTF  LI+G C   +   A      L  F   PDV+ +  L++GL +  +
Sbjct: 53  LLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGN 112

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK-- 131
              A+ LFE M +          P+  TY T+I GLCK G ++KA+ELL +M  +  K  
Sbjct: 113 PDQAVKLFENMESSR------VNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSA 166

Query: 132 PNVVTYTSVIR-GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           P++VTY ++I  G C   D  EA  +   M   G  P+V+T+N I+  LC  G++ EA+ 
Sbjct: 167 PDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAE 226

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +L  M      PD  T+NTLLDGFC  G +  A E+   M        V +Y+IL+NG C
Sbjct: 227 ILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 283

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT- 309
           +  +++ A  L  E++ +G  PDV+ + +L  GL +  ++E A KL  EM    + A+  
Sbjct: 284 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMV 343

Query: 310 --------WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
                   +TY   + GL K+G I +AV L   L       D+  YN+LIDGLCK+ R+ 
Sbjct: 344 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 403

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L   +      PN VT   ++ GLC  G++D A  L ++M      PNV+ +  LI
Sbjct: 404 EACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 463

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G  + +       +L  M+   V  D
Sbjct: 464 DGLCKSDRMDDACVVLDAMRGQGVALD 490



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 221/459 (48%), Gaps = 17/459 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +     L  + +    PD   F  LI GL  +    +A  LF  +      PD+FTY
Sbjct: 76  GQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTY 135

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIID-GLCKEGFVDKAKE 120
            T+++GLC++ +   A  L EEM    G+      P+ VTY T+I+ G+CK+G V++A E
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRRGGK----SAPDIVTYNTLINAGICKDGDVEEALE 191

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  MK     P+V+TY S+I   C A    EA  +   M      P++VTFN ++D  C
Sbjct: 192 ILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFC 248

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +  A  +L+ M +  + PD  TY  L++G C  G+V  A  L   +   G    V 
Sbjct: 249 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 308

Query: 241 SYSILINGYCKNKEIE---------GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           +Y+ L++G CK+ EIE          A  + +EM+S  + P +  +N +  GL +   + 
Sbjct: 309 AYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 368

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           +A  L  ++   G   D  TY T IDGLCK   + EA +L   +  L C  +     S++
Sbjct: 369 KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVV 428

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GLC+ GR++ A  L   +      PNVV Y+ +I GLC   +MD A  +   M    V 
Sbjct: 429 FGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVA 488

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            +   +  LI   I     ++ + +  +M     +PD S
Sbjct: 489 LDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGS 527



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 230/457 (50%), Gaps = 21/457 (4%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +  D  ++  L+  L           ++  L   GC P++ T+  L+ G C+      AL
Sbjct: 23  YKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRAL 82

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
                +     EF V   P+   +  +I GL K+G  D+A +L   M+   + P++ TY 
Sbjct: 83  EFLRAL----DEFSVA--PDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYN 136

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQ--PNVVTFNVIMDE-LCKNGKMDEASRLLDLM 195
           +VI G C + +  +A+ L  EM+ +G +  P++VT+N +++  +CK+G ++EA  +LD M
Sbjct: 137 TVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGM 196

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G  PD  TYN+++   C+ GRV  A E+   +++M C   + +++ L++G+CK   +
Sbjct: 197 KLAGPAPDVITYNSIIHALCVAGRVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGML 253

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             AL +  EM  + I PDV+ +  L  GL  + QV+ AF L +E+ R G   D   Y + 
Sbjct: 254 PRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSL 313

Query: 316 IDGLCKNGYIVEAVELFHTL---RILKCEFDIR------AYNSLIDGLCKSGRLEIALEL 366
           +DGLCK+G I EA +L   +    IL     I        YN ++ GL K G +  A+ L
Sbjct: 314 VDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSL 373

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
              L     VP+VVTY+ +I GLC   ++ +A DL  +M      PN +T   ++ G  R
Sbjct: 374 ISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCR 433

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +        L+ +M      P+  + + ++D L K++
Sbjct: 434 VGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSD 470



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 200/400 (50%), Gaps = 24/400 (6%)

Query: 20  TPDAVTFTSLIK-GLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            PD VT+ +LI  G+C +  + EA  +   +++ G  PDV TY ++++ LC     + A 
Sbjct: 166 APDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAA 225

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            + + M+         C P+ VT+ T++DG CK G + +A E+L +M  +NI P+V+TYT
Sbjct: 226 EILKTMS---------CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 276

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL------- 191
            ++ G C       A  L  E++ QG  P+V+ +  ++D LCK+G+++EA +L       
Sbjct: 277 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAR 336

Query: 192 --LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             L  M+   + P  FTYN +L G    G ++ A  L   + + G    V +Y+ LI+G 
Sbjct: 337 EILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 396

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK   +  A  L  EM S G  P+ V   ++  GL  + +V+ A+ L  EM R   A + 
Sbjct: 397 CKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNV 456

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y + IDGLCK+  + +A  +   +R      D  AY  LI  +   GR+  A+ ++  
Sbjct: 457 VVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDE 516

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +     +P+  T   +      +  M  +   + ++EENA
Sbjct: 517 MVARGFLPDGSTSKTL-----EEAAMSNSVFEWTNLEENA 551



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 203/434 (46%), Gaps = 50/434 (11%)

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R+S   +A+  F+     +G      + +  +Y  ++D L K G   +  ++   +    
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGY-----KHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSG 57

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PN+VT+  +IRG C A     A      + +  V P+V  FN ++  L K+G  D+A 
Sbjct: 58  CSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAV 117

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT--VFSYSILIN 247
           +L + M    V PD FTYNT++ G C +G +  A+EL   M   G K    + +Y+ LIN
Sbjct: 118 KLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLIN 177

Query: 248 -GYCKNKEIEGALSLYSEMLSKGIKPDV-----VIH------------------------ 277
            G CK+ ++E AL +   M   G  PDV     +IH                        
Sbjct: 178 AGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDL 237

Query: 278 ---NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
              NTL  G  +   + RA ++ +EM R  +  D  TY   ++GLC+ G +  A  L   
Sbjct: 238 VTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEE 297

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV---------LVPNVVTYSIM 385
           +       D+ AY SL+DGLCKSG +E A +L + +             +VP + TY+I+
Sbjct: 298 IVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIV 357

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           +GGL  DG + KA  L  D+     VP+V+T++ LI G  + N   +  +L  +M  +  
Sbjct: 358 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGC 417

Query: 446 MP-DASIVSIVVDL 458
            P D ++ S+V  L
Sbjct: 418 FPNDVTLGSVVFGL 431



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 163/334 (48%), Gaps = 24/334 (7%)

Query: 6   HGFVVLGRILK--------SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD 57
           H   V GR+++        SC +PD VTF +L+ G C    +  A  +  ++      PD
Sbjct: 213 HALCVAGRVVEAAEILKTMSC-SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 271

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           V TYT LVNGLCR     VA  L EE+       G +  P+ + YT+++DGLCK G +++
Sbjct: 272 VITYTILVNGLCRVGQVQVAFYLLEEIVRQ----GYI--PDVIAYTSLVDGLCKSGEIEE 325

Query: 118 A---------KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           A         +E+L +M   N+ P + TY  V+ G       ++A  L  +++ +G  P+
Sbjct: 326 AHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD 385

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           VVT+N ++D LCK  ++ EA  L D M   G  P+  T  +++ G C  GRV+ A  L V
Sbjct: 386 VVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVV 445

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M        V  Y+ LI+G CK+  ++ A  +   M  +G+  D   +  L V +    
Sbjct: 446 EMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGG 505

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           +V  A  ++DEM   G   D  T +T  +    N
Sbjct: 506 RVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSN 539



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 144/268 (53%), Gaps = 6/268 (2%)

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           Q G + D  +YN LLD    +G      +++  +   GC   + ++ ILI G CK  +  
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL     +    + PDV I N L  GLF+    ++A KLF+ M+ + V  D +TY T I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVI 139

Query: 317 DGLCKNGYIVEAVELFHTL--RILKCEFDIRAYNSLID-GLCKSGRLEIALELFRSLPCG 373
            GLCK+G + +A EL   +  R  K   DI  YN+LI+ G+CK G +E ALE+   +   
Sbjct: 140 SGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLA 199

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P+V+TY+ +I  LC  G++ +A ++   M   +  P+++TF+ L+ GF +     + 
Sbjct: 200 GPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRA 256

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
           +E+L +M   N++PD    +I+V+ L +
Sbjct: 257 LEVLEEMCRENILPDVITYTILVNGLCR 284



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 120/243 (49%), Gaps = 15/243 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV--------- 51
           +G+V   F +L  I++  + PD + +TSL+ GLC    I EA  L  ++           
Sbjct: 285 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVS 344

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
               P +FTY  ++ GL +      A++L  ++       G V  P+ VTY T+IDGLCK
Sbjct: 345 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV----ARGYV--PDVVTYNTLIDGLCK 398

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
              V +A +L  +M      PN VT  SV+ G C     ++A  L +EM  +   PNVV 
Sbjct: 399 ANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVV 458

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  ++D LCK+ +MD+A  +LD M   GV  D F Y  L+      GRV  A  ++  M 
Sbjct: 459 YTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMV 518

Query: 232 SMG 234
           + G
Sbjct: 519 ARG 521


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 122/349 (34%), Positives = 197/349 (56%)

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           VTY T+I   C+EG +++A E++  M DK +KP++ TY ++I G C    +  AK + IE
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M++ G+ P+  T+N ++ E C+     EA  +   M++ GV PD  ++++L+  F     
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++ A   F  M+  G       Y++L++GYC+N  +  AL +  EML +G   DV+ +NT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  GL +   +  A KLFDEM   G   D +T+ T I G C++G + +A+ LF T+    
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + DI AYN+LIDG CK G +E A EL+  +    + PN +TY I+I   C+ G + +A 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            L+  M E  + P ++T + +I+G+ R  + SK  E L +M    V PD
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 350



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 194/371 (52%), Gaps = 10/371 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+ +LI   C E  + EA  +   +   G +P +FTY  ++NGLC+      A  +  E
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M N      +   P+T TY T++   C+     +AKE+  +M  + + P++V+++S++  
Sbjct: 62  MLN------IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAV 115

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           F   +  ++A   F +M   G+ P+ V + V+M   C+NG M EA ++ D M++ G   D
Sbjct: 116 FSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 175

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
              YNT+L+G C    +  A +LF  M   G     ++++ LI+G+C++  +  ALSL+ 
Sbjct: 176 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 235

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            M  + IKPD+V +NTL  G  ++ ++E+A +L+D M    +  +  TY   I+  C  G
Sbjct: 236 TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVG 295

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
           ++ EA  L+  +     +  +   N++I G C+SG    A E    +    + P+ ++Y+
Sbjct: 296 HVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYN 355

Query: 384 IMIGGLCNDGQ 394
            +I    NDG+
Sbjct: 356 TLI----NDGK 362



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++  +      P   T+ ++I GLC + R   A  +  ++   G  PD  TY
Sbjct: 15  GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 74

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+   CR  +   A  +F EM       GVV  P+ V++++++    +   +D+A   
Sbjct: 75  NTLLVESCRRDNFSEAKEIFGEMLRQ----GVV--PDLVSFSSLMAVFSRNRHLDQALVY 128

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              MK   + P+ V YT ++ G+C   +  EA ++  EM++QG   +V+ +N I++ LCK
Sbjct: 129 FRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCK 188

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + +A +L D M++ G  PD +T+ TL+ G C  G +  A  LF +M     K  + +
Sbjct: 189 EKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVA 248

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+CK  E+E A  L+  M+S+ I P+ + +  L      +  V  AF+L+D M 
Sbjct: 249 YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMI 308

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
             G+     T  T I G C++G   +A E    +       D  +YN+LI+
Sbjct: 309 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 155/289 (53%)

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           +VT+N ++   C+ G ++EA  +++ M   G++P  FTYN +++G C  GR   AK + +
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M ++G      +Y+ L+   C+      A  ++ EML +G+ PD+V  ++L        
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            +++A   F +M++ G+  D   Y   + G C+NG ++EA+++   +    C  D+ AYN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           ++++GLCK   L  A +LF  +     +P+  T++ +I G C DG M KA  LF  M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            + P+++ ++ LI GF ++ E  K  EL   M    + P+     I+++
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 289



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 6/158 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  TFT+LI G C +  + +A +LF  +     +PD+  Y TL++G C+      A  L
Sbjct: 209 PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASEL 268

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           ++ M +          PN +TY  +I+  C  G V +A  L   M +K IKP +VT  +V
Sbjct: 269 WDGMISRK------IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV 322

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           I+G+C + D ++A      M+ +GV P+ +++N ++++
Sbjct: 323 IKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 80/159 (50%)

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY T I   C+ G + EA E+ +++     +  +  YN++I+GLCK GR   A  +   +
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               L P+  TY+ ++   C      +A+++F +M    VVP++++F  L+  F R    
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            + +     MK+  ++PD  I ++++    +N   L +L
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEAL 161



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 93/191 (48%)

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           +V +NTL         +E AF++ + M   G+    +TY   I+GLCK G    A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +  +    D   YN+L+   C+      A E+F  +    +VP++V++S ++     + 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            +D+A   F DM++  +VP+ + + +L+ G+ R     + +++  +M E   + D    +
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 454 IVVDLLAKNEI 464
            +++ L K ++
Sbjct: 181 TILNGLCKEKM 191


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 240/511 (46%), Gaps = 72/511 (14%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           +SHG    GR +     P+  T+  +++ LC    +  A  LF  LR  G  PD  TY+T
Sbjct: 146 LSHG--AFGRRI----APNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYST 199

Query: 64  LVNGLCRTSHTIVALNLFEEMAN------------------GNGEFGVV----------- 94
           L++G  + +    AL L +EM +                   NGEF              
Sbjct: 200 LMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDP 259

Query: 95  -CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
              PN  TY  ++DGLCK G   +A ++  +M   N +P+++TY ++I G C + D + A
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA 319

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR------------ 201
            R++ EM+  G+ P+VV +N ++   C  G++ EA +  D M   G+R            
Sbjct: 320 ARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGL 379

Query: 202 -----------------------PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
                                  PD  T++T++ G C  G  N + ++     + G +  
Sbjct: 380 FDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELD 439

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            FSYS +I+G CK+  ++ A+ LY ++     KP+  I+N L  G  +  +   A +++ 
Sbjct: 440 EFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYS 499

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M  N  +  T TY T I GLCK    +EA      +    C  D+  Y SLI GLC+  
Sbjct: 500 QMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDK 559

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITF 417
           +++ AL L+  +    L  +VV ++I+I GLC+ G++D+A  L  +M E+N   PNV+T+
Sbjct: 560 KIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTY 619

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           + L+ GF       K   L   + E  ++PD
Sbjct: 620 NTLMDGFYETGCFDKAASLWMAILENGLVPD 650



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 228/471 (48%), Gaps = 42/471 (8%)

Query: 33  LCAESR-IMEAAAL--FTKLRVF-GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L A SR +M  AAL  F +L  F GC P V ++  L++   R      A   F  +++G 
Sbjct: 91  LSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHG- 149

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
             FG    PN  TY  ++  LC  G +D+A  L   ++ + + P+ +TY++++ GF    
Sbjct: 150 -AFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH-GVRPDAFTY 207
             + A  L  EM    VQP+ V +N ++    +NG+ ++A R+ + +++  G  P+  TY
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N +LDG C  G    A +++  M +   +  + +Y  +I+G C++ +++ A  +YSEM+ 
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV---------------------A 306
            G+ PDVVI+N+L  G     +V  A+K +D M  +G+                     A
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKA 388

Query: 307 ADTW--------------TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
            D W              T+ T I GLC+ G+  +++++    R    E D  +Y+S+I 
Sbjct: 389 TDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMIS 448

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GLCK GRL+ A++L+  +      PN   Y+ +I G C   +   A  ++  M EN   P
Sbjct: 449 GLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSP 508

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             IT++ LI G  +  +  +      +M E   M D +    ++  L +++
Sbjct: 509 TTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDK 559



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 201/387 (51%), Gaps = 7/387 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   ++K+   PD V + SL+KG C   R+ EA   +  + V G   +V +Y  ++ GL 
Sbjct: 322 VYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLF 380

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  A +L+E +   +        P+ VT++T+I GLC++GF +K+ ++L + +   
Sbjct: 381 DGGMVDKATDLWELLEKDDS-----LSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSG 435

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            + +  +Y+S+I G C     ++A +L+ ++     +PN   +N +++  C+  K  +A 
Sbjct: 436 KELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAI 495

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           R+   M ++   P   TYNTL+ G C   +   A      M   GC   V +Y  LI G 
Sbjct: 496 RVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGL 555

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-QRNGVAAD 308
           C++K+I+GAL+L++++L KG++ DVV+HN L  GL    +V+ A +L  EM ++N    +
Sbjct: 556 CRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPN 615

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY T +DG  + G   +A  L+  +       DI +YN+ I GLC   R    ++L  
Sbjct: 616 VVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLN 675

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQM 395
            +    ++P  +T++I++  +   G +
Sbjct: 676 EMLASGIIPTAITWNILVRAVIKYGPI 702



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 132/256 (51%), Gaps = 7/256 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +  +I    F P++  + +LI G C  S+  +A  +++++    C P   TY
Sbjct: 454 GRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITY 513

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++GLC+    + A     EM     E G + + NT  Y ++I GLC++  +D A  L
Sbjct: 514 NTLIHGLCKAEKYLEASRFTREML----EKGCMLDVNT--YGSLIRGLCRDKKIDGALAL 567

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELC 180
             Q+ DK ++ +VV +  +I G C A   +EA +L  EM ++    PNVVT+N +MD   
Sbjct: 568 WNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFY 627

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G  D+A+ L   ++++G+ PD  +YNT + G C   R     +L   M + G   T  
Sbjct: 628 ETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAI 687

Query: 241 SYSILINGYCKNKEIE 256
           +++IL+    K   I+
Sbjct: 688 TWNILVRAVIKYGPIQ 703


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 235/447 (52%), Gaps = 7/447 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+   +  LI GLC E RI +A  LF ++ V    P+  T+ TL++G C+     VA+ L
Sbjct: 99  PNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGL 158

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E M           EP+ +T+ +++ GLCK   +++A+ +L ++K     P+  TY+ +
Sbjct: 159 RERMKKEK------VEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSII 212

Query: 141 IRGFCYAKDW-NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
             G   + D    A  L+ E + +GV+ +  T +++++ LCK GK+++A  +L  +++HG
Sbjct: 213 FDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHG 272

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P    YNT+++G+C  G ++ A      MES G +    +++ +I+ +C+ + I+ A 
Sbjct: 273 LVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAE 332

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
               +M+ KGI P V  +N L  G   +    R F++ +EM+ NG   +  +Y + I+ L
Sbjct: 333 EWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCL 392

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK+G I+EA  +   +       +   YN LIDG C  G+L  AL  F  +    +   +
Sbjct: 393 CKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATI 452

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTY+ +I GLC  G++ +A ++F  +      P+VIT++ LI G+       K +EL   
Sbjct: 453 VTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYET 512

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISL 466
           MK++ + P  +    ++   +K  I L
Sbjct: 513 MKKLGLKPTINTFHPLISGCSKEGIKL 539



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 243/487 (49%), Gaps = 17/487 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +  R+ K    P  +TF SL+ GLC   RI EA  +  +++  G  PD FTY
Sbjct: 150 GEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTY 209

Query: 62  TTLVNGLCRTSHTI-VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + + +GL ++      AL+L+ E A G G      + +  T + +++GLCKEG V+KA+E
Sbjct: 210 SIIFDGLLKSDDGAGAALDLYRE-AIGKG-----VKIDNYTCSILLNGLCKEGKVEKAEE 263

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  + +  + P  V Y +++ G+C   D + A     +M  +G++PN + FN ++D+ C
Sbjct: 264 VLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFC 323

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +   +D+A   +  M+  G+ P   TYN L+DG+      +   ++   ME  G K  V 
Sbjct: 324 EMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVI 383

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY  LIN  CK+ +I  A  +  +M+ +G+ P+  I+N L  G   + ++  A + FDEM
Sbjct: 384 SYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM 443

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +NG+ A   TY + I GLCK G + EA E+F  +       D+  YNSLI G   +G  
Sbjct: 444 SKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNS 503

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +  LEL+ ++    L P + T+  +I G   +G +     LF +M +  + P+ + ++ +
Sbjct: 504 QKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAM 562

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           I  +       K   L  +M ++ V PD             N + L  L    + E ++ 
Sbjct: 563 IHCYQETGHVQKAFSLQKEMVDMGVRPDNKTY---------NSLILGHLKEGKLSETKDL 613

Query: 481 VDESNVK 487
           VD+   K
Sbjct: 614 VDDMKAK 620



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 198/410 (48%), Gaps = 7/410 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +    + + ++      P+ + F S+I   C    I +A     K+   G  P V T
Sbjct: 290 IGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVET 349

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++G  R         + EEM   NGE     +PN ++Y ++I+ LCK+G + +A+ 
Sbjct: 350 YNILIDGYGRLCVFSRCFQILEEMEE-NGE-----KPNVISYGSLINCLCKDGKILEAEM 403

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  M  + + PN   Y  +I G C      EA R F EM   G+   +VT+N ++  LC
Sbjct: 404 VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLC 463

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  +  L+   G  PD  TYN+L+ G+   G      EL+ +M+ +G K T+ 
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           ++  LI+G C  + I+   +L++EML   + PD V++N +     E   V++AF L  EM
Sbjct: 524 TFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEM 582

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  D  TY + I G  K G + E  +L   ++      +   Y+ LI G C     
Sbjct: 583 VDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDF 642

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
             A   +R +     +PNV   + +  GL  DG++ +A+ +  +M  N +
Sbjct: 643 NGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 211/427 (49%), Gaps = 8/427 (1%)

Query: 33  LCAESRI-MEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF 91
           +C+ES++  + + L+  +R  G  P       +V  L  +      L+LF+EM       
Sbjct: 5   VCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMV------ 58

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
           G+   P+ + Y   +    K G +  A EL   MK + + PNV  Y  +I G C  K   
Sbjct: 59  GLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIR 118

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A++LF EM  + + PN VTFN ++D  CK G++D A  L + M +  V P   T+N+LL
Sbjct: 119 DAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLL 178

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG-ALSLYSEMLSKGI 270
            G C   R+  A+ +   ++  G     F+YSI+ +G  K+ +  G AL LY E + KG+
Sbjct: 179 SGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGV 238

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           K D    + L  GL +  +VE+A ++   +  +G+      Y T ++G C+ G +  A+ 
Sbjct: 239 KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAIL 298

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
               +       +  A+NS+ID  C+   ++ A E  + +    + P+V TY+I+I G  
Sbjct: 299 TIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYG 358

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
                 +   +  +MEEN   PNVI++  LI    +  +  +   +L  M    V+P+A+
Sbjct: 359 RLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNAN 418

Query: 451 IVSIVVD 457
           I ++++D
Sbjct: 419 IYNMLID 425



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 129/243 (53%), Gaps = 3/243 (1%)

Query: 221 NHAKELFVSMESMGCKHTVFSY-SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           +   EL+  M   G +   F Y  +++    ++K+ +  L L+ EM+  G +PD +++  
Sbjct: 13  SQVSELYDFMRQEG-RLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGR 71

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
             +   ++  ++ A +LF+ M+R  V  + + Y   I GLCK   I +A +LF  + +  
Sbjct: 72  AMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRN 131

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              +   +N+LIDG CK+G +++A+ L   +    + P+++T++ ++ GLC   ++++AR
Sbjct: 132 LVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEAR 191

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPS-KVIELLHKMKEINVMPDASIVSIVVDL 458
            +  +++ N  VP+  T+ ++  G ++ ++ +   ++L  +     V  D    SI+++ 
Sbjct: 192 CMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNG 251

Query: 459 LAK 461
           L K
Sbjct: 252 LCK 254



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 1/215 (0%)

Query: 250 CKNKEIEGALS-LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           C   ++   +S LY  M  +G  P       +   L E  + +    LF EM   G   D
Sbjct: 6   CSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPD 65

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
              Y   +    K G +  A+ELF T++  K   ++  YN LI GLCK  R+  A +LF 
Sbjct: 66  KLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFG 125

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    LVPN VT++ +I G C  G++D A  L   M++  V P++ITF+ L+ G  +  
Sbjct: 126 EMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKAR 185

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
              +   +L+++K    +PD    SI+ D L K++
Sbjct: 186 RIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSD 220


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 241/485 (49%), Gaps = 46/485 (9%)

Query: 2   GRVSHGF-VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G+V  G  ++ GR  K C  P+ V + ++I G C    I  A  +F +L++ G  P + T
Sbjct: 219 GKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLET 277

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV-------------------------- 94
           + T++NG C+    + +  L  E+        V                           
Sbjct: 278 FGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII 337

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
              C+P+  TY  +I+ LCKEG  + A   L +   K + PN ++Y  +I+ +C +K+++
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
            A +L ++M ++G +P++VT+ +++  L  +G MD+A  +   +I  GV PDA  YN L+
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C TGR   AK LF  M         + Y+ LI+G+ ++ + + A  ++S  + KG+K
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVK 517

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
            DVV HN +  G      ++ A    + M    +  D +TY T IDG  K   +  A+++
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI 577

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +   KC+ ++  Y SLI+G C  G  ++A E F+ +    LVPNVVTY+ +I  L  
Sbjct: 578 FRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637

Query: 392 DGQ-MDKARDLFLDMEENAVVPNVITFDMLIRGFIR------INEP--------SKVIEL 436
           +   ++KA   +  M  N  VPN +TF+ L++GF++      + EP        S   E 
Sbjct: 638 ESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEF 697

Query: 437 LHKMK 441
            H+MK
Sbjct: 698 FHRMK 702



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 228/481 (47%), Gaps = 41/481 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +   SL+  L    R+ +A  ++ ++   G   D ++   LV G+C      V   L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E      G +G  C PN V Y TII G CK G ++ A  +  ++K K   P + T+ ++
Sbjct: 228 IE------GRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGV----------------------------------- 165
           I GFC   D+  + RL  E+ ++G+                                   
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +P+V T+N++++ LCK GK + A   LD   + G+ P+  +Y  L+  +C +   + A +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L + M   GCK  + +Y ILI+G   +  ++ A+++  +++ +G+ PD  I+N L  GL 
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +  +   A  LF EM    +  D + Y T IDG  ++G   EA ++F        + D+ 
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            +N++I G C+SG L+ AL     +    LVP+  TYS +I G      M  A  +F  M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           E+N   PNV+T+  LI GF    +     E   +M+  +++P+    + ++  LAK   +
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESST 641

Query: 466 L 466
           L
Sbjct: 642 L 642



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 197/424 (46%), Gaps = 6/424 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PDV    +L++ L ++     A  +++EM +           +  +   ++ G+C EG V
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSV------DNYSTCILVKGMCNEGKV 221

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           +  ++L+     K   PN+V Y ++I G+C   D   A  +F E+  +G  P + TF  +
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++  CK G    + RLL  + + G+R   +  N ++D     G      E    + +  C
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           K  V +Y+ILIN  CK  + E A+    E   KG+ P+ + +  L     +  + + A K
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  +M   G   D  TY   I GL  +G++ +AV +   L       D   YN L+ GLC
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K+GR   A  LF  +    ++P+   Y+ +I G    G  D+AR +F    E  V  +V+
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
             + +I+GF R     + +  +++M E +++PD    S ++D   K +    ++  F   
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581

Query: 476 EQQE 479
           E+ +
Sbjct: 582 EKNK 585



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 175/367 (47%), Gaps = 5/367 (1%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N    ++ +  L +    ++ +++L  ++++N+K      + V+  +  +   ++A  ++
Sbjct: 98  NGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIY 157

Query: 158 ---IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
              +E+ D    P+V+  N ++  L K+ ++ +A ++ D M   G   D ++   L+ G 
Sbjct: 158 DYVVELYDS--VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGM 215

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G+V   ++L       GC   +  Y+ +I GYCK  +IE A  ++ E+  KG  P +
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTL 275

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
               T+  G  +      + +L  E++  G+    W     ID   ++GY V+  E    
Sbjct: 276 ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW 335

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C+ D+  YN LI+ LCK G+ E+A+          L+PN ++Y+ +I   C   +
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
            D A  L L M E    P+++T+ +LI G +        + +  K+ +  V PDA+I ++
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455

Query: 455 VVDLLAK 461
           ++  L K
Sbjct: 456 LMSGLCK 462



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 150/337 (44%), Gaps = 54/337 (16%)

Query: 2   GRVSHGFVVLG----------RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV 51
           G + HG VV G          +++    +PDA  +  L+ GLC   R + A  LF+++  
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFE---------------EMANGNGEFGVVCE 96
               PD + Y TL++G  R+     A  +F                 M  G    G++ E
Sbjct: 479 RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538

Query: 97  --------------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
                         P+  TY+TIIDG  K+  +  A ++   M+    KPNVVTYTS+I 
Sbjct: 539 ALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLIN 598

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK-NGKMDEASRLLDLMIQHGVR 201
           GFC   D+  A+  F EM  + + PNVVT+  ++  L K +  +++A    +LM+ +   
Sbjct: 599 GFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCV 658

Query: 202 PDAFTYNTLLDGFC--LTGRV-------NHAK-----ELFVSMESMGCKHTVFSYSILIN 247
           P+  T+N LL GF    +G+V       NH +     E F  M+S G      +Y+  + 
Sbjct: 659 PNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALV 718

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
             C +  ++ A     +M+ KG  PD V    +  G 
Sbjct: 719 CLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 122/299 (40%), Gaps = 58/299 (19%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V   ++IKG C    + EA A   ++      PD FTY+T+++G  +      A+ +F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M          C+PN VTYT++I+G C +G    A+E   +M+ +++ PNVVTYT++I
Sbjct: 579 RYMEKNK------CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632

Query: 142 RGFCYAKDWNEAKRLFIE-MMDQGVQPNVVTFNVIMDE---------------------- 178
           R         E    + E MM     PN VTFN ++                        
Sbjct: 633 RSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSS 692

Query: 179 ---------------------------LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
                                      LC +G +  A    D M++ G  PD  ++  +L
Sbjct: 693 LFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752

Query: 212 DGFCLTGRVNHAKEL-FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
            GFC+ G     + + F ++   G +  V  YS ++  +     I  A ++   M+ K 
Sbjct: 753 HGFCVVGNSKQWRNMDFCNLGEKGLEVAV-RYSQVLEQHLPQPVICEASTILHAMVEKA 810


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 214/437 (48%), Gaps = 12/437 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++      +  + +    PD  T+  +I  LC   RI  A   F  +     EPDV TY
Sbjct: 24  GKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTY 79

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GLC+      A +LF  M       G    P+ VTYTT+ID  CK    + A  L
Sbjct: 80  NTLLGGLCKNGRVAQACSLFGSME------GAGITPSDVTYTTLIDVFCKMCQFETAYGL 133

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  +   P V +Y S+I G C  +  ++A +LF EM   G +P+ VT+N ++  LC 
Sbjct: 134 LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 193

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA  LL +M+++  +PD  T+  L++G C T R+  A  LF  M   GC   + +
Sbjct: 194 KQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVT 253

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++L++  C  +++  ALS+            V+++  +F  L      +RA +L  +M 
Sbjct: 254 HTVLVSKLCIRRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAARLLQKMA 311

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R GVA +  TY  F  GL      + A   F  +     E D+ AYN L+DG CK+ RL+
Sbjct: 312 RRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLD 371

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A ++ R +    L PN+VTY+ ++G  C  G+++   +L   M      P+V T+  L+
Sbjct: 372 MAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLV 431

Query: 422 RGFIRINEPSKVIELLH 438
            G  R+ +       L+
Sbjct: 432 AGLFRVGQVDAAYSFLN 448



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 178/371 (47%), Gaps = 6/371 (1%)

Query: 91  FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
           F   C+PN ++Y  ++  LC+ G +DKA   + +M  + + P+V TY  VI   C A+  
Sbjct: 2   FSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 61

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           + A    IE  +   +P+VVT+N ++  LCKNG++ +A  L   M   G+ P   TY TL
Sbjct: 62  SRA----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 117

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           +D FC   +   A  L   M S  C  TV+SY  +ING CKN++++ A  L+ EM   G 
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           KPD V +NTL  GL    ++  A  L   M  N    D  T+   I+GLC    I EA  
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFV 237

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           LF  +    C  D+  +  L+  LC   +L  AL + R+ P       V+ Y+ +   L 
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYP--ACPEAVILYTPIFRELG 295

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
                D+A  L   M    V PNV+T+    +G     E  +      +M E  + PD  
Sbjct: 296 RRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 355

Query: 451 IVSIVVDLLAK 461
             +++VD   K
Sbjct: 356 AYNVLVDGFCK 366



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 141/259 (54%), Gaps = 14/259 (5%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++++ F PD +TFT+LI+GLC   RI EA  LF  +   GC PD+ T+T LV+ LC    
Sbjct: 207 MVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRK 266

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL++              C    + YT I   L +    D+A  LL +M  + + PN
Sbjct: 267 LRPALSVVRNYP--------ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPN 318

Query: 134 VVTYTSVIRGFCYAKDWNE---AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           VVTYT+  +G     DW E   A R F  M++QG++P++V +NV++D  CK  ++D A +
Sbjct: 319 VVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEK 375

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           ++  M Q G+ P+  TYNTL+   C  G+V    EL  +M S G +  V ++S L+ G  
Sbjct: 376 MVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLF 435

Query: 251 KNKEIEGALSLYSEMLSKG 269
           +  +++ A S  +  +S+G
Sbjct: 436 RVGQVDAAYSFLNLAMSQG 454



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 143/285 (50%), Gaps = 10/285 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ +LI GLC + R+ EA  L T +     +PD  T+T L+ GLC T     A  L
Sbjct: 179 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVL 238

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN-VVTYTS 139
           F+ MA         C P+ VT+T ++  LC      K +  L  +++    P  V+ YT 
Sbjct: 239 FQGMAKQG------CAPDLVTHTVLVSKLC---IRRKLRPALSVVRNYPACPEAVILYTP 289

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           + R     + ++ A RL  +M  +GV PNVVT+      L    +   A R    M++ G
Sbjct: 290 IFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQG 349

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD   YN L+DGFC   R++ A+++   M+  G    + +Y+ L+  +C+  ++E   
Sbjct: 350 IEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIG 409

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
            L   M+S+G +PDV   +TL  GLF + QV+ A+   +     G
Sbjct: 410 ELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 138/262 (52%), Gaps = 4/262 (1%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           +  Q  +PN +++  ++  LC+ GK+D+A   +  M +  + PD FTYN ++D  C   R
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++ A E F +M     +  V +Y+ L+ G CKN  +  A SL+  M   GI P  V + T
Sbjct: 61  ISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L     ++ Q E A+ L   M     +   ++Y + I+GLCKN  + +A +LF  +++  
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C+ D   YN+LI GLC   RL  A +L   +      P+ +T++ +I GLC   ++ +A 
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 400 DLFLDMEENAVVPNVITFDMLI 421
            LF  M +    P+++T  +L+
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLV 258



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           S  CK    SY  L+   C+  +I+ A S  +EM  + + PDV  +N +   L +  ++ 
Sbjct: 3   SQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRIS 62

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           RA + F+ M       D  TY T + GLCKNG + +A  LF ++           Y +LI
Sbjct: 63  RAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLI 118

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           D  CK  + E A  L + +      P V +Y  +I GLC + ++D+A  LF +M+     
Sbjct: 119 DVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCK 178

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           P+ +T++ LI G        +  +LL  M E +  PD    + +++ L   +
Sbjct: 179 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTD 230


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/502 (31%), Positives = 245/502 (48%), Gaps = 45/502 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGRV    V  G +      PD VT+ ++IK  C E  +  A   F  L   G EP+ FT
Sbjct: 52  MGRVYSQLVQDGLL------PDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFT 105

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
              LV G CRT     A  LF  M        + C+ N  +YT +I GLC    V KA  
Sbjct: 106 CNALVLGYCRTGELRKACWLFLMMPL------MGCQRNEYSYTILIQGLCDAKCVRKALV 159

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L MK     PNV  +T +I G C +    +A+ LF  M   GV P+V+T+N ++    
Sbjct: 160 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 219

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M++A ++ +LM ++G  PD +TYNTL+ G C   +   A+EL  +    G   TV 
Sbjct: 220 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVV 278

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LINGYC  ++ + AL + ++M+S   K D+ +   L   L +  +++ A +L +E+
Sbjct: 279 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 338

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG+  +  TY + IDG CK+G +  A+E+   +    C+ +   YNSL+ GL K  +L
Sbjct: 339 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 398

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN-----VI 415
             A+ L   +    ++PNV+TY+ ++ G C++   D A  LF  ME+N + P+     V+
Sbjct: 399 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 458

Query: 416 T---------------------------FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           T                           +  LI GF +         L+ +M +    PD
Sbjct: 459 TDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 518

Query: 449 ASIVSIVVDLLAKNEISLNSLP 470
           +   S+++  L K +    +LP
Sbjct: 519 SYTYSVLLHALCKQKRLNEALP 540



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 244/513 (47%), Gaps = 74/513 (14%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+   FT LI GLC   R+ +A  LF  +   G  P V TY  ++ G  +      AL 
Sbjct: 170 SPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALK 229

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + +E+   NG     C P+  TY T+I GLC +   ++A+ELL     +   P VVT+T+
Sbjct: 230 I-KELMEKNG-----CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTN 282

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G+C A+ +++A R+  +MM    + ++  F  +++ L K  ++ EA  LL+ +  +G
Sbjct: 283 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 342

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+  TY +++DG+C +G+V+ A E+   ME  GC+   ++Y+ L+ G  K+K++  A+
Sbjct: 343 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 402

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +L ++M   GI P+V+ + TL  G  + H  + AF+LF+ M++NG+  D   Y    D L
Sbjct: 403 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 462

Query: 320 CKNGYIVEA-----------VELFHTLRI---------------------LKCEFDIRAY 347
           CK G   EA            ++++T  I                       C  D   Y
Sbjct: 463 CKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 522

Query: 348 NSLIDGLCKSGRLEIALEL-----FRSLPCGVLV-------------------------- 376
           + L+  LCK  RL  AL +      R + C +                            
Sbjct: 523 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 582

Query: 377 ----PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               P+  TY++ I   C +G+++ A DL L ME   V P+V+T+++LI G   +    +
Sbjct: 583 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 642

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
               L +M   +  P+     +++  L K  ++
Sbjct: 643 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLA 675



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 227/476 (47%), Gaps = 25/476 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     VL  + +    P+A T+ SL+ GL  + ++ +A AL TK++  G  P+V TY
Sbjct: 361 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITY 420

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL+ G C       A  LFE M   NG      +P+   Y  + D LCK G  ++A   
Sbjct: 421 TTLLQGQCDEHDFDNAFRLFE-MMEQNG-----LKPDEHAYAVLTDALCKAGRAEEAYSF 474

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +++   K +    V YT++I GF  A + + A  L   M+D+G  P+  T++V++  LCK
Sbjct: 475 IVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 531

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA  +LD M   G++   F Y  L+D     G+ +HAK ++  M S G K +  +
Sbjct: 532 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 591

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++ IN YCK   +E A  L  +M  +G+ PDVV +N L  G   +  ++RAF     M 
Sbjct: 592 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 651

Query: 302 RNGVAADTWTYRTFIDGLCKN--GYIVEA--------VELFHTLRILK------CEFDIR 345
                 + WTY   +  L K    Y+           +EL  T ++L+          + 
Sbjct: 652 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 711

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y+SLI G CK+GRLE A  L   +    L PN   Y+++I   C+    +KA      M
Sbjct: 712 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 771

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            E    P + ++ +L+ G     +  KV  L   + E+    D     I+ D L K
Sbjct: 772 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 827



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 161/340 (47%), Gaps = 22/340 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       ++ R++    TPD+ T++ L+  LC + R+ EA  +  ++ + G +  +F Y
Sbjct: 498 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 557

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++ + R      A  ++ EM +   +      P+  TYT  I+  CKEG ++ A++L
Sbjct: 558 TILIDEMLREGKHDHAKRMYNEMTSSGHK------PSATTYTVFINSYCKEGRLEDAEDL 611

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +L+M+ + + P+VVTY  +I G  +    + A      M+    +PN  T+ +++  L K
Sbjct: 612 ILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK 671

Query: 182 NG----------------KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
                             ++D   +LL+ M++HG+ P   TY++L+ GFC  GR+  A  
Sbjct: 672 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 731

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M   G       Y++LI   C  K  E ALS  S M   G +P +  +  L VGL 
Sbjct: 732 LLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLC 791

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
                E+   LF ++   G   D   ++   DGL K GY+
Sbjct: 792 NEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 831



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 162/361 (44%), Gaps = 24/361 (6%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           V +T+LI G         AA L  ++   GC PD +TY+ L++ LC+      AL + ++
Sbjct: 485 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQ 544

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M+      G+ C      YT +ID + +EG  D AK +  +M     KP+  TYT  I  
Sbjct: 545 MS----LRGIKC--TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 598

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           +C      +A+ L ++M  +GV P+VVT+N+++D     G +D A   L  M+     P+
Sbjct: 599 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 658

Query: 204 AFTYNTLLDGFCLTGRVNHAK-----------------ELFVSMESMGCKHTVFSYSILI 246
            +TY  LL    L G + + +                 +L   M   G   TV +YS LI
Sbjct: 659 YWTYCLLLKHL-LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 717

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G+CK   +E A  L   M  KG+ P+  I+  L     +    E+A      M   G  
Sbjct: 718 AGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQ 777

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
               +YR  + GLC  G   +   LF  L  L    D  A+  L DGL K+G ++I  ++
Sbjct: 778 PQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQM 837

Query: 367 F 367
            
Sbjct: 838 L 838



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 48/303 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+  H   +   +  S   P A T+T  I   C E R+ +A  L  K+   G  PDV TY
Sbjct: 568 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 627

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGE--FGVVC------------------------ 95
             L++G     +   A +  + M   + E  +   C                        
Sbjct: 628 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 687

Query: 96  -------------------EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
                               P   TY+++I G CK G +++A  LL  M  K + PN   
Sbjct: 688 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 747

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           YT +I+  C  K + +A      M + G QP + ++ +++  LC  G  ++   L   ++
Sbjct: 748 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 807

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G   D   +  L DG    G V+   ++   ME   C  +  +Y+++ N   K  E+ 
Sbjct: 808 ELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN---KMHEVS 864

Query: 257 GAL 259
            +L
Sbjct: 865 SSL 867



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 41/96 (42%)

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           + YN  +  L +    E    ++  L    L+P+ VTY+ MI   C +G +  A   F  
Sbjct: 34  KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRL 93

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           + E  + P   T + L+ G+ R  E  K   L   M
Sbjct: 94  LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 129


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 236/464 (50%), Gaps = 39/464 (8%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           +T LIKGLC E RI +A  L  ++ + G  P V+TY  +++G C++     AL + + + 
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALM 345

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
             NG     C P+  TY ++I GLC  G +D+A+ELL     +   P V+T+T++I G+C
Sbjct: 346 EQNG-----CNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYC 399

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            A+  ++A R+   M+    + ++  + V+++ L K  ++ EA   L+ M  +G+ P+  
Sbjct: 400 KAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVV 459

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            Y +++DG+C  G V  A E+F  ME  GC    ++Y  LI G  ++K++  A++L ++M
Sbjct: 460 IYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKM 519

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
              GI P V+ + TL  G  + H+ + AF+LF+ M++NG+  D   Y    D LCK+G  
Sbjct: 520 QEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRA 579

Query: 326 VEAVEL---------------------------FHTLRILK-----CEFDIRAYNSLIDG 353
            EA                              F  + I K     C+ D+  Y+ L+  
Sbjct: 580 EEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQA 639

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCK  +L  AL +   +    +  N+V Y+I+I  +  +G+ D A+ LF +M  +   P+
Sbjct: 640 LCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPS 699

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             T+ + I  + +I +  +   L+ +M+   V PD     I ++
Sbjct: 700 ATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFIN 743



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 211/417 (50%), Gaps = 7/417 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ ++I   C +  +  A   F  LR  G + D +T   L+ G CRTS    A  L
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M        + C  N  +YT +I GL +   V +A  L+  M       N+  YT +
Sbjct: 237 LMMMPL------MGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLL 290

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I+G C     ++A+ L  EM  +GV P+V T+N ++D  CK+G+M +A  +  LM Q+G 
Sbjct: 291 IKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGC 350

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD +TYN+L+ G C  G+++ A+EL     + G   TV +++ LINGYCK + I+ AL 
Sbjct: 351 NPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALR 409

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + S M+S   K D+  +  L   L +  +++ A +  +EM  NG+A +   Y + IDG C
Sbjct: 410 VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYC 469

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G +  A+E+F  +    C  +   Y SLI GL +  +L  A+ L   +    + P V+
Sbjct: 470 KVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVI 529

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
            Y+ +I G C   + D A  LF  ME+N + P+   +++L     +     +    L
Sbjct: 530 AYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL 586



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 224/533 (42%), Gaps = 95/533 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRI---------------------- 39
           G++     +L   +   FTP  +TFT+LI G C   RI                      
Sbjct: 367 GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAY 426

Query: 40  -------------MEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
                         EA     ++   G  P+V  YT++++G C+      AL +F+ M +
Sbjct: 427 GVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEH 486

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                   C PN  TY ++I GL ++  + KA  L+ +M++  I P V+ YT++I+G C 
Sbjct: 487 EG------CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCK 540

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
             +++ A RLF  M   G+ P+   +NV+ D LCK+G+ +EA   L   ++ GV     T
Sbjct: 541 KHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVT 597

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS------ 260
           Y +L+DGF   G  + A  L   M + GCK  +++YS+L+   CK K++  ALS      
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMT 657

Query: 261 -----------------------------LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
                                        L++EM+S G KP    +        +I Q+E
Sbjct: 658 VSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIE 717

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A  L  EM+R+GV  D  TY  FI+G    GY+  A      +    CE +   Y  L+
Sbjct: 718 EAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLL 777

Query: 352 ----------------DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                            G+     L    +L   +    L P VVTYS +I G C   ++
Sbjct: 778 KHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRL 837

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           ++A  L   M   A+ PN   + MLI+    I    K +  +  M E    P 
Sbjct: 838 EEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQ 890



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 225/488 (46%), Gaps = 60/488 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T+ SLI GL  + ++ +A AL TK++  G  P V  YTTL+ G C+      A  L
Sbjct: 491 PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRL 550

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE M   NG       P+   Y  + D LCK G  ++A   L++   K +    VTYTS+
Sbjct: 551 FE-MMEKNG-----LTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSL 601

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GF  A + + A  L  +M+++G + ++ T++V++  LCK  K++EA  +LD M   GV
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + +   Y  ++      G+ +HAK LF  M S G K +  +Y++ I+ YCK  +IE A  
Sbjct: 662 KCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEH 721

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM   G+ PDVV ++    G   +  ++RAF     M       + WTY   +    
Sbjct: 722 LIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFL 781

Query: 321 K----NGYIVEAVELFHTL----------RILKCEFD--IRAYNSLIDGLCKSGRLEIAL 364
           K    N + ++   +++ +          R++K   +  +  Y+S+I G CK+ RLE A 
Sbjct: 782 KMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEAC 841

Query: 365 ELFRSLPCGVLVPNVVTYSIMIG-----------------------------------GL 389
            L   +    + PN   Y+++I                                    GL
Sbjct: 842 VLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGL 901

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C++G  D+A+ LF D+       N + + +L  G ++        +LL  M   +   D+
Sbjct: 902 CDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDS 961

Query: 450 SIVSIVVD 457
              S++ D
Sbjct: 962 ESYSMLTD 969



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 177/351 (50%), Gaps = 1/351 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+TVTY T+I   CK+G +  A      +++  ++ +  T  +++ G+C   D  +A  L
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            + M   G + N  ++ +++  L +   + EA  L+ +M+Q G   +   Y  L+ G C 
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCK 296

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR++ A+ L   M   G   +V++Y+ +I+GYCK+  ++ AL + + M   G  PD   
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L  GL    +++ A +L +     G      T+   I+G CK   I +A+ +   + 
Sbjct: 357 YNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C+ D++AY  LI+ L K  RL+ A E    +    L PNVV Y+ +I G C  G + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVG 475

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            A ++F  ME     PN  T+  LI G I+  +  K + L+ KM+E  + P
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITP 526



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 1/324 (0%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +L+  ++ +G+ P+ VT+N ++   CK G +  A R   L+ + G++ D +T N LL G+
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C T  +  A  L + M  MGC+   +SY+ILI G  + + +  AL L   M+  G   ++
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNL 284

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
            ++  L  GL +  ++  A  L DEM   GV    WTY   IDG CK+G + +A+ +   
Sbjct: 285 HMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C  D   YNSLI GLC  G+L+ A EL          P V+T++ +I G C   +
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D A  +  +M  +    ++  + +LI   I+     +  E L++M    + P+  I + 
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTS 463

Query: 455 VVDLLAKNEISLNSLPSFTVHEQQ 478
           ++D   K  +   +L  F + E +
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHE 487



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 158/382 (41%), Gaps = 57/382 (14%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+TSL+ G         AA L  K+   GC+ D++TY+ L+  LC+      AL++ ++
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M       GV C  N V YT II  + KEG  D AK L  +M     KP+  TYT  I  
Sbjct: 656 MTVS----GVKC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISS 709

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           +C      EA+ L  EM   GV P+VVT+++ ++     G MD A   L  M+     P+
Sbjct: 710 YCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPN 769

Query: 204 AFTYNTLLDGFCLTGRVNH----------------AKELFVSMESMGCKHTVFSYSILIN 247
            +TY  LL  F     +N                   +L   M   G   TV +YS +I 
Sbjct: 770 CWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIA 829

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIH------------------------------ 277
           G+CK   +E A  L   ML K I P+  I+                              
Sbjct: 830 GFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQP 889

Query: 278 -----NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
                + L VGL +    +RA  LF ++       +   ++   DGL K G++    +L 
Sbjct: 890 QLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949

Query: 333 HTLRILKCEFDIRAYNSLIDGL 354
             +    C  D  +Y+ L D +
Sbjct: 950 AAMDNRHCRIDSESYSMLTDSI 971



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 121/288 (42%), Gaps = 22/288 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+  H   +   ++ S   P A T+T  I   C   +I EA  L  ++   G  PDV TY
Sbjct: 679 GKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTY 738

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK---- 117
              +NG     +   A +  + M + +      CEPN  TY  ++    K   ++     
Sbjct: 739 HIFINGCGHMGYMDRAFSTLKRMVDAS------CEPNCWTYWLLLKHFLKMSLINAHYID 792

Query: 118 ------------AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
                         +LL +M    + P VVTY+S+I GFC A    EA  L   M+ + +
Sbjct: 793 TSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAI 852

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN   + +++   C      +    +  MI+ G +P   +Y+ L+ G C  G  + AK 
Sbjct: 853 SPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKS 912

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           LF  +  M   H   ++ IL +G  K   ++    L + M ++  + D
Sbjct: 913 LFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRID 960



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 20/262 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF---GCEPD 57
           +G++     ++G + +   TPD VT+   I G C     M+ A  F+ L+      CEP+
Sbjct: 713 IGQIEEAEHLIGEMERDGVTPDVVTYHIFING-CGHMGYMDRA--FSTLKRMVDASCEPN 769

Query: 58  VFTYTTLVNGLCRTS----HTI--------VALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
            +TY  L+    + S    H I        + LN   ++     + G+   P  VTY++I
Sbjct: 770 CWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGL--NPTVVTYSSI 827

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I G CK   +++A  LL  M  K I PN   YT +I+  C  K + +      +M++ G 
Sbjct: 828 IAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGF 887

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           QP + +++ ++  LC  G  D A  L   ++      +   +  L DG    G V+   +
Sbjct: 888 QPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQ 947

Query: 226 LFVSMESMGCKHTVFSYSILIN 247
           L  +M++  C+    SYS+L +
Sbjct: 948 LLAAMDNRHCRIDSESYSMLTD 969



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 35/207 (16%)

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N     L      E   KL+  + + G+  DT TY T I   CK G +  A   F  LR
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC----------GVLVP--------- 377
               + D    N+L+ G C++  L  A  L   +P            +L+          
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 378 ----------------NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
                           N+  Y+++I GLC +G++  AR L  +M    VVP+V T++ +I
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G+ +       + +   M++    PD
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPD 353



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 3/119 (2%)

Query: 325 IVEAVELFHTLRIL---KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           + EAV+    +R +   +     + YN  +  L +    E   +L+  L    L+P+ VT
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVT 181

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           Y+ MI   C  G +  A   F  + E+ +  +  T + L+ G+ R ++  K   LL  M
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMM 240


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 245/476 (51%), Gaps = 23/476 (4%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           +++   PD VT+ +LI+GLC +S   EA     ++   GC PD FTY T+++G C+ S  
Sbjct: 247 MRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 306

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A  L ++        G V  P+ VTY ++I+GLC EG V++A EL  + + K IKP++
Sbjct: 307 QEATELLKDAVFK----GFV--PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 360

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           V Y S+++G C       A ++  EM ++G  P++ T+N++++ LCK G + +A+ +++ 
Sbjct: 361 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND 420

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
            I  G  PD FT+NTL+DG+C   +++ A +L   M   G      +Y+ ++NG CK  +
Sbjct: 421 AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 480

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +      + EM+ KG  P+ + +N L       +++E A K+  +M + G+  D  ++ T
Sbjct: 481 VNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNT 540

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I G C+NG +  A  LF  L           +N+LI        + +A ++F  +    
Sbjct: 541 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 600

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
              +  TY ++I G C    +D+A    ++M +   +P++ TF  +I      +   + +
Sbjct: 601 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAV 660

Query: 435 ELLHKMKEINVMPD-------------ASIVSIVVDLLAKNEISLNSLPSFTV-HE 476
            ++H M +I V+P+             A+   +V DL+ K  I   S P++ V HE
Sbjct: 661 GIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHI---SYPTYEVLHE 713



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/437 (33%), Positives = 223/437 (51%), Gaps = 11/437 (2%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L +  +PD  T T  ++  C  +R   A  L   L   G       Y T+V GL    
Sbjct: 110 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHG 165

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           HT  A  LF++M + +        PN   +  ++  LCK G V +A  LL ++  + +  
Sbjct: 166 HTHDARQLFDQMLHTH------VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 219

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N+ TY   IRG C A    EA RL   M    V P+VVT+N ++  LCK     EA   L
Sbjct: 220 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 278

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  G  PD FTYNT++DG+C    V  A EL       G      +Y  LING C  
Sbjct: 279 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 338

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            ++E AL L++E  +KGIKPD+V++N+L  GL     +  A ++ +EM   G   D  TY
Sbjct: 339 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 398

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+GLCK G I +A  + +   +     D+  +N+LIDG CK  +L+ AL+L   +  
Sbjct: 399 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 458

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + P+ +TY+ ++ GLC  G++++  + F +M      PN IT+++LI  F R N+  +
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 518

Query: 433 VIELLHKMKEINVMPDA 449
             +++ KM +  + PDA
Sbjct: 519 ASKVIVKMSQEGLHPDA 535



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 215/428 (50%), Gaps = 12/428 (2%)

Query: 2   GRVSHGFV-----VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG       +  ++L +   P+   F  ++  LC    ++EA  L  K+   G   
Sbjct: 160 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 219

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           ++FTY   + GLC       A+ L + M      + V   P+ VTY T+I GLCK+    
Sbjct: 220 NLFTYNIWIRGLCEAGRLPEAVRLVDGMR----AYAV---PDVVTYNTLIRGLCKKSMPQ 272

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A   L +M ++   P+  TY ++I G+C      EA  L  + + +G  P+ VT+  ++
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           + LC  G ++ A  L +     G++PD   YN+L+ G CL G + HA ++   M   GC 
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 392

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             + +Y+I+ING CK   I  A  + ++ + KG  PDV   NTL  G  +  +++ A +L
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 452

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            + M   G+A DT TY + ++GLCK G + E  E F  + +  C  +   YN LI+  C+
Sbjct: 453 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 512

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           S ++E A ++   +    L P+ V+++ +I G C +G ++ A  LF  +EE        T
Sbjct: 513 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADT 572

Query: 417 FDMLIRGF 424
           F+ LI  F
Sbjct: 573 FNTLIGAF 580



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 206/436 (47%), Gaps = 11/436 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           + + I+      R+ +A   F ++ +F C P    Y  +++ L   ++   A  ++  M 
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM- 111

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                      P+  T+T  +   C       A  LL  +  +      V Y +V+ G  
Sbjct: 112 -----LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLY 162

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                ++A++LF +M+   V PN+  FN ++  LCK G + EA  LL  +IQ G+  + F
Sbjct: 163 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 222

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN  + G C  GR+  A  L   M +      V +Y+ LI G CK    + A+     M
Sbjct: 223 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRM 281

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           +++G  PD   +NT+  G  +I  V+ A +L  +    G   D  TY + I+GLC  G +
Sbjct: 282 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 341

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A+ELF+  +    + DI  YNSL+ GLC  G +  AL++   +      P++ TY+I+
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I GLC  G +  A  +  D      +P+V TF+ LI G+ +  +    ++L+ +M E  +
Sbjct: 402 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461

Query: 446 MPDASIVSIVVDLLAK 461
            PD    + V++ L K
Sbjct: 462 APDTITYNSVLNGLCK 477



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 6/275 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +S   VV+   +   + PD  TF +LI G C   ++  A  L  ++  +G  PD  T
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 467

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +++NGLC+          F+EM          C PN +TY  +I+  C+   +++A +
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEMILKG------CHPNPITYNILIENFCRSNKMEEASK 521

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++++M  + + P+ V++ ++I GFC   D   A  LF ++ ++G      TFN ++    
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 581

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
               M  A ++ D M+  G R D++TY  L+DG C T  V+ A    V M   G   ++ 
Sbjct: 582 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 641

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           ++  +IN    N  +  A+ +   M+  G+ P+VV
Sbjct: 642 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/433 (32%), Positives = 222/433 (51%), Gaps = 40/433 (9%)

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVV----CEPNTVTYTTIIDGLCKEGFVDKAK 119
           +VNG C+  + + A NL  ++ +    F ++    C  N V+YT +I GLC+ G VD+  
Sbjct: 1   MVNGYCKLGNLVEA-NLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGI 59

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  +M++ +  P V TYT ++     +    EA  LF EM ++G +PN+ T+ V+++ +
Sbjct: 60  NIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK  K++E  R+LD M++ G+ P   TYN L+DG+C  G V  A+E+   M S  C    
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI G+C+ K +  A++L S+ML   + P VV +N+L  G  +I  ++ A++L + 
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL------------------------ 335
           M  NGV  D WTY  FID LCK G I EA  LF++L                        
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 336 ---------RIL--KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
                    R+L   C  +   YN+LIDGLCK  +++ AL L  S+    L   V TY+I
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  +  +G  D A  +   M  +   P+V  +   I  F       +  +++  M E  
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419

Query: 445 VMPDASIVSIVVD 457
           VMPDA   ++V+D
Sbjct: 420 VMPDALTYTLVID 432



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 223/426 (52%), Gaps = 6/426 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV  G  +  ++ +    P   T+T ++  L    R MEA  LF+++R  GCEP++ T
Sbjct: 52  VGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHT 111

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT ++N +C+ +       + +EM     E G+V  P+  TY  +IDG CKEG V+ A+E
Sbjct: 112 YTVMINAMCKETKLEEGRRILDEMV----EKGLV--PSVPTYNALIDGYCKEGMVEAAQE 165

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  M   +  PN  TY  +I GFC  K+ + A  L  +M++  + P+VVT+N ++   C
Sbjct: 166 ILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQC 225

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +D A RLL+LM ++GV PD +TY+  +D  C  GR+  A  LF S++  G K    
Sbjct: 226 KIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEV 285

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ LI+GYCK  +++ A SL   ML++   P+   +N L  GL +  +V+ A  L + M
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + G+     TY   I  + K G    A  +   +     + D+  Y + I   C  G +
Sbjct: 346 IQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNI 405

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A ++   +    ++P+ +TY+++I      G ++ A D+   M +    P+  T+  L
Sbjct: 406 KEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCL 465

Query: 421 IRGFIR 426
           I+  ++
Sbjct: 466 IKHLLK 471



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 228/464 (49%), Gaps = 10/464 (2%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V+  F V   + K     + V++T+LI GLC   R+ E   +F K+R   C P V TYT 
Sbjct: 20  VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           +V+ L  +   + A+NLF EM     E G  CEPN  TYT +I+ +CKE  +++ + +L 
Sbjct: 80  IVHALFESGRRMEAINLFSEMR----ERG--CEPNIHTYTVMINAMCKETKLEEGRRILD 133

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M +K + P+V TY ++I G+C       A+ +   M      PN  T+N ++   C+  
Sbjct: 134 EMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKK 193

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +  A  LL  M++  + P   TYN+L+ G C  G ++ A  L   M   G     ++YS
Sbjct: 194 NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYS 253

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           + I+  CK   IE A  L++ +  KGIK + VI+  L  G  +  +++ A  L D M   
Sbjct: 254 VFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE 313

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTL--RILKCEFDIRAYNSLIDGLCKSGRLE 361
               ++ TY   IDGLCK   + EA+ L  ++  + LKC   +  Y  LI  + K G  +
Sbjct: 314 DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCT--VPTYTILIVAMLKEGDFD 371

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +   +      P+V  Y+  I   C  G + +A D+   M E  V+P+ +T+ ++I
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
             +  +   +   ++L +M +    P     S ++  L K E++
Sbjct: 432 DAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELT 475



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 213/478 (44%), Gaps = 36/478 (7%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC  P+  T+  LI G C +  +  A AL +K+      P V TY +L++G C+  +   
Sbjct: 174 SC-NPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDS 232

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A  L   M     E GVV  P+  TY+  ID LCK+G +++A  L   +K+K IK N V 
Sbjct: 233 AYRLLNLM----NENGVV--PDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVI 286

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           YT++I G+C A   ++A  L   M+ +   PN  T+N ++D LCK  K+ EA  L++ MI
Sbjct: 287 YTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMI 346

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           Q G++    TY  L+      G  ++A  +   M S G +  V+ Y+  I+ +C    I+
Sbjct: 347 QKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIK 406

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  + S M  +G+ PD + +  +      +  +  AF +   M   G      TY   I
Sbjct: 407 EAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466

Query: 317 DGLCK-----------------NGYIVE------------AVELFHTLRILKCEFDIRAY 347
             L K                 N +  +            A+ELF  +    C  +I  Y
Sbjct: 467 KHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTY 526

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
             LI GLCK GRL +A +LF  +    + P+   Y+ ++   C  G    A  L   M E
Sbjct: 527 AKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           +  +P + + ++L  G        K   +   + +     D     I++D L KN +S
Sbjct: 587 HGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLS 644



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 213/447 (47%), Gaps = 24/447 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   + +L  + ++   PD  T++  I  LC + RI EA  LF  L+  G + +   
Sbjct: 227 IGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVI 286

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G C+      A +L + M   +      C PN+ TY  +IDGLCKE  V +A  
Sbjct: 287 YTALIDGYCKAGKMDDANSLLDRMLTED------CLPNSSTYNALIDGLCKERKVQEALL 340

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+  M  K +K  V TYT +I       D++ A R+  +M+  G QP+V  +   +   C
Sbjct: 341 LMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFC 400

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G + EA  ++ +M + GV PDA TY  ++D +   G +N A ++   M   GC  +  
Sbjct: 401 TRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHH 460

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV---IHNTLFVGLFEIHQV---ERAF 294
           +YS LI              L  E L+K  K   +   I N  F  + ++ ++   E A 
Sbjct: 461 TYSCLIK------------HLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETAL 508

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +LF++M  +G + +  TY   I GLCK G +  A +LF  +           YNSL++  
Sbjct: 509 ELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCC 568

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C+ G    A+ L  ++     +P + + +++  GL  +G  +KA+ +F ++ +     + 
Sbjct: 569 CELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDE 628

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMK 441
           + + +LI G ++        ELL  M+
Sbjct: 629 VAWKILIDGLLKNGLSDGCSELLGVME 655



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 152/313 (48%)

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
           D N A  +F  M  +G + N V++  ++  LC+ G++DE   +   M +    P   TY 
Sbjct: 19  DVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYT 78

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            ++     +GR   A  LF  M   GC+  + +Y+++IN  CK  ++E    +  EM+ K
Sbjct: 79  VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G+ P V  +N L  G  +   VE A ++ D M  N    +  TY   I G C+   +  A
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + L   +   +    +  YNSLI G CK G L+ A  L   +    +VP+  TYS+ I  
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC  G++++A  LF  ++E  +  N + +  LI G+ +  +      LL +M   + +P+
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN 318

Query: 449 ASIVSIVVDLLAK 461
           +S  + ++D L K
Sbjct: 319 SSTYNALIDGLCK 331



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 166/382 (43%), Gaps = 35/382 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L R+L     P++ T+ +LI GLC E ++ EA  L   +   G +  V TY
Sbjct: 298 GKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTY 357

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+  + +      A  + ++M +   +      P+   YT  I   C  G + +A+++
Sbjct: 358 TILIVAMLKEGDFDYAHRILDQMVSSGYQ------PDVYIYTAFIHAFCTRGNIKEAEDM 411

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M ++ + P+ +TYT VI  +      N A  +   M D G  P+  T++ ++  L K
Sbjct: 412 MSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLK 471

Query: 182 NG-----------------------------KMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
                                          K + A  L + M++HG  P+  TY  L+ 
Sbjct: 472 EELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLII 531

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C  GR+  A++LF  M   G   +   Y+ L+N  C+      A+ L   M+  G  P
Sbjct: 532 GLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLP 591

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
            +   N LF GL+E    E+A  +F  + + G   D   ++  IDGL KNG      EL 
Sbjct: 592 LLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELL 651

Query: 333 HTLRILKCEFDIRAYNSLIDGL 354
             +    C+   + Y  LI+GL
Sbjct: 652 GVMEARGCQIHPQTYRMLIEGL 673


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/402 (34%), Positives = 213/402 (52%), Gaps = 6/402 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +F  +IKG C    + +   +  ++   G  P+V  YTTL++G C+         LF
Sbjct: 150 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLF 209

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M    GE  VV   N  TYT +I+G  K G      EL  +MK   I PNV TY S+I
Sbjct: 210 YKM----GELDVVA--NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 263

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C     N A  LF EM ++GV  NVVT+N ++  LC+  ++ EA RL+  M + G+ 
Sbjct: 264 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 323

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  +YNTL+DG+C  G ++ A  LF  M+S G   ++ +Y+ILI G+ + K   G   +
Sbjct: 324 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 383

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM ++G+ P  V +  L   L     +E+AF+++  M++ G+ AD + Y   I GLC 
Sbjct: 384 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 443

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA +LF +L  +  + +   YN++I G CK G    AL L + +    +VPNV +
Sbjct: 444 VGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 503

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           Y+  I  LC D +  +A  L  DM E  + P++  ++M+ + 
Sbjct: 504 YNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 545



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 221/437 (50%), Gaps = 7/437 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             P + TF +L+  L   +   +A  +F + +    + DV+++  ++ G C   +     
Sbjct: 113 LVPGSNTFNNLLILLIKSNFFEKAWRVFNETK-GNVKLDVYSFGIMIKGCCEVGYLDKGF 171

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            +  +M     E G+   PN V YTT+IDG CK G +++ K+L  +M + ++  N  TYT
Sbjct: 172 EVLGQME----EMGL--SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYT 225

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I GF       +   L+ +M   G+ PNV T+N ++   C +GK++ A  L D M + 
Sbjct: 226 VLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRER 285

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV  +  TYNTL+ G C   RV  A+ L   M+  G    + SY+ LI+GYC    ++ A
Sbjct: 286 GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA 345

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            SL+++M S G  P +  +N L  G  E         +  EM+  G++    TY   +D 
Sbjct: 346 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 405

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L ++  I +A +++ ++       DI  Y  LI GLC  G ++ A +LF+SL    L PN
Sbjct: 406 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 465

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ MI G C +G   +A  L  +M EN +VPNV +++  I    +  + ++   LL 
Sbjct: 466 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLK 525

Query: 439 KMKEINVMPDASIVSIV 455
            M E+ + P  SI +++
Sbjct: 526 DMIELGLKPSISIWNMI 542



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 216/444 (48%), Gaps = 8/444 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P  V     I      S++ E A  +    +  G  P   T+  L+  L +++    A  
Sbjct: 79  PTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWR 138

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +F E   GN +  V       ++  +I G C+ G++DK  E+L QM++  + PNVV YT+
Sbjct: 139 VFNE-TKGNVKLDVY------SFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTT 191

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C   D    K+LF +M +  V  N  T+ V+++   K G   +   L + M   G
Sbjct: 192 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 251

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+ +TYN+++   C  G++N+A ELF  M   G    V +Y+ LI G C+ + +  A 
Sbjct: 252 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 311

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L   M   G+ P+++ +NTL  G   I  +++A  LF++M+ +G +    TY   I G 
Sbjct: 312 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 371

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            +        ++   +           Y  L+D L +S  +E A +++ S+    LV ++
Sbjct: 372 SEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADI 431

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             Y ++I GLC  G M +A  LF  ++E  + PN + ++ +I G+ +     + + LL +
Sbjct: 432 YIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKE 491

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           M E  ++P+ +  +  + +L K+E
Sbjct: 492 MGENGMVPNVASYNSTIXILCKDE 515



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 191/385 (49%), Gaps = 6/385 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +  GF VLG++ +   +P+ V +T+LI G C    I     LF K+       + +T
Sbjct: 164 VGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYT 223

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+NG  +       + L+E+M       G+V  PN  TY ++I   C +G ++ A E
Sbjct: 224 YTVLINGFFKMGLKKDGIELYEKMK----LTGIV--PNVYTYNSMICRCCNDGKLNNAFE 277

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M+++ +  NVVTY ++I G C  +   EA+RL   M   G+ PN++++N ++D  C
Sbjct: 278 LFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYC 337

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G +D+AS L + M   G  P   TYN L+ GF          ++   ME+ G   +  
Sbjct: 338 SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 397

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+IL++   ++  IE A  +YS M   G+  D+ I+  L  GL  +  ++ A KLF  +
Sbjct: 398 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 457

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +  +   Y T I G CK G    A+ L   +       ++ +YNS I  LCK  + 
Sbjct: 458 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKW 517

Query: 361 EIALELFRSLPCGVLVPNVVTYSIM 385
             A  L + +    L P++  ++++
Sbjct: 518 TEAEVLLKDMIELGLKPSISIWNMI 542



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 140/321 (43%), Gaps = 41/321 (12%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG    G  +  ++  +   P+  T+ S+I   C + ++  A  LF ++R  G   +V T
Sbjct: 234 MGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVT 293

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+ GLC+    + A  L   M            PN ++Y T+IDG C  G +DKA  
Sbjct: 294 YNTLIGGLCQERRVLEAERLMCRMKRDG------LSPNLISYNTLIDGYCSIGNLDKASS 347

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL- 179
           L  QMK     P++ TY  +I GF  AK+      +  EM  +G+ P+ VT+ ++MD L 
Sbjct: 348 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 407

Query: 180 ----------------------------------CKNGKMDEASRLLDLMIQHGVRPDAF 205
                                             C  G M EAS+L   + +  ++P+  
Sbjct: 408 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 467

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            YNT++ G+C  G    A  L   M   G    V SY+  I   CK+++   A  L  +M
Sbjct: 468 IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDM 527

Query: 266 LSKGIKPDVVIHNTLFVGLFE 286
           +  G+KP + I N +    F+
Sbjct: 528 IELGLKPSISIWNMISKARFD 548


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 226/443 (51%), Gaps = 9/443 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L R+ K    P   T+ +L+        I +A  +   +  FG EPD++TY
Sbjct: 258 GMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTY 317

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L  GLC+      A  L +EM     + G+V  P+ VTY T++D   K      A  L
Sbjct: 318 NVLAAGLCQAGKVDEAFKLKDEME----QLGIV-SPDVVTYNTLVDACFKCQRSSDALNL 372

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M++K +K ++VT+  +++G C      EA      M ++G+ P+V+T+N ++D  CK
Sbjct: 373 LEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCK 432

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A  L+D M++ G++ D FT NTLL   C   R   A+EL  +    G      S
Sbjct: 433 AGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVS 492

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  ++  Y K  + E AL L+ EM+ + + P +  +NTL  GL  + ++  A    +E+ 
Sbjct: 493 YGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELM 552

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGR 359
             G+  D  TY   I   CK G + +A + FH  ++++  F  D+   N+L++GLC  GR
Sbjct: 553 EMGLVPDDTTYNIIIHAYCKEGDLEKAFQ-FHN-KMVENSFKPDVVTCNTLMNGLCLYGR 610

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LE A++LF S        +V+TY+ +I  LC D  +D A   F DME   + P+V T+++
Sbjct: 611 LEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNV 670

Query: 420 LIRGFIRINEPSKVIELLHKMKE 442
           L+          +  ++LHK+ E
Sbjct: 671 LLSALSEAGRSVEAQKMLHKLNE 693



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 229/461 (49%), Gaps = 7/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++     L ++     +PDAVT+ +L+   C +  + EA  L  +++  G  P   TY
Sbjct: 223 GTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATY 282

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLV+   R      A ++ E M      FG   EP+  TY  +  GLC+ G VD+A +L
Sbjct: 283 NTLVSAYARLGWIKQATDVVEAMT----AFGF--EPDLWTYNVLAAGLCQAGKVDEAFKL 336

Query: 122 LLQMKDKNI-KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
             +M+   I  P+VVTY +++      +  ++A  L  EM ++GV+ ++VT N+I+  LC
Sbjct: 337 KDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLC 396

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+++EA   L++M + G+ PD  TYNTL+D  C  G V  A  L   M   G K   F
Sbjct: 397 REGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTF 456

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + + L+   CK K  E A  L      +G  PD V + T+    F+ ++ E A  L+DEM
Sbjct: 457 TLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM 516

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +  +     TY T I GL   G + EA++  + L  +    D   YN +I   CK G L
Sbjct: 517 IKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDL 576

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +    +      P+VVT + ++ GLC  G+++KA  LF    E     +VIT++ L
Sbjct: 577 EKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTL 636

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I+   + N+    +     M+   + PD    ++++  L++
Sbjct: 637 IQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSE 677



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 174/363 (47%), Gaps = 36/363 (9%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + PN  T+  ++   C      +A     +M   G+ P+ VT+N +++  C+ G + EA 
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M + G+ P   TYNTL+  +   G +  A ++  +M + G +  +++Y++L  G 
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324

Query: 250 CKNKEIEGALSLYSEMLSKGI-KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           C+  +++ A  L  EM   GI  PDVV +NTL    F+  +   A  L +EM+  GV + 
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSS 384

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG---------- 358
             T+   + GLC+ G + EA+     +       D+  YN+LID  CK+G          
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMD 444

Query: 359 -------------------------RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
                                    R E A EL R+ P    VP+ V+Y  ++     + 
Sbjct: 445 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEY 504

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           + + A  L+ +M +  + P++ T++ LI+G   + + ++ I+ L+++ E+ ++PD +  +
Sbjct: 505 KPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYN 564

Query: 454 IVV 456
           I++
Sbjct: 565 III 567



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 190/399 (47%), Gaps = 27/399 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++      L  + +   TPD +T+ +LI   C    + +A  L  ++   G + D FT 
Sbjct: 399 GQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTL 458

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  LC+      A    EE+     + G V  P+ V+Y T++    KE   + A  L
Sbjct: 459 NTLLYNLCKEKRYEEA----EELLRAPPQRGFV--PDEVSYGTVMAAYFKEYKPEPALCL 512

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + + P++ TY ++I+G        EA     E+M+ G+ P+  T+N+I+   CK
Sbjct: 513 WDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCK 572

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +++A +  + M+++  +PD  T NTL++G CL GR+  A +LF S    G K  V +
Sbjct: 573 EGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVIT 632

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI   CK+ +++ AL  +++M  +G++PDV  +N L   L E  +   A K+  ++ 
Sbjct: 633 YNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLN 692

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI-----------RAYNSL 350
            +G     + Y +          I  +VE   T +  + + DI            +YN  
Sbjct: 693 ESGKLYGRFFYPS----------IKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKY 742

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           I  LC  G+L+ A  +   +    +  +  TY  ++ GL
Sbjct: 743 IKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 160/356 (44%), Gaps = 42/356 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+  FV++  +++S    D  T  +L+  LC E R  EA  L       G  PD  +Y
Sbjct: 434 GNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSY 493

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++    +      AL L++EM            P+  TY T+I GL   G + +A + 
Sbjct: 494 GTVMAAYFKEYKPEPALCLWDEMIKRK------LTPSISTYNTLIKGLSTMGKLTEAIDK 547

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++ +  + P+  TY  +I  +C   D  +A +   +M++   +P+VVT N +M+ LC 
Sbjct: 548 LNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCL 607

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++++A +L +  ++ G + D  TYNTL+   C    V+ A   F  ME  G +  VF+
Sbjct: 608 YGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFT 667

Query: 242 YSILINGYCK-NKEIEGALSLYS--------------------EMLSKGIKPDVVI---- 276
           Y++L++   +  + +E    L+                     E +  G  P+V      
Sbjct: 668 YNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIES 727

Query: 277 -----------HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
                      +N     L    Q++ A  + DEM + G++ D  TY T ++GL K
Sbjct: 728 VGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 131/274 (47%), Gaps = 4/274 (1%)

Query: 188 ASRLLDLMIQHG-VRPDAFTYNTLLDGFCLTGRVNHAKEL--FVSMESMGCKHTVFSYSI 244
           A++LL    + G VRP     N +L     +   +    L  F S+ ++      +++++
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNL 214

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L++ +C    +  ALS  S+M   G+ PD V +NTL         +  A  L   M++ G
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEG 274

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +     TY T +    + G+I +A ++   +     E D+  YN L  GLC++G+++ A 
Sbjct: 275 IVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 334

Query: 365 ELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           +L   +   G++ P+VVTY+ ++       +   A +L  +M E  V  +++T +++++G
Sbjct: 335 KLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKG 394

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             R  +  + +  L  M E  + PD    + ++D
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 42/250 (16%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+++     L  +++    PD  T+  +I   C E  + +A     K+     +PDV T
Sbjct: 538 MGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVT 597

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             TL+NGLC       A+ LFE       +  V      +TY T+I  LCK+  VD A  
Sbjct: 598 CNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDV------ITYNTLIQALCKDNDVDTALR 651

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF---------------------IE 159
               M+ + ++P+V TY  ++     A    EA+++                      +E
Sbjct: 652 FFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVE 711

Query: 160 MMDQGVQPNVV---------------TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
            ++ G  P V                ++N  + ELC  G++ EA  +LD M+Q G+  D 
Sbjct: 712 AVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDN 771

Query: 205 FTYNTLLDGF 214
            TY TL++G 
Sbjct: 772 STYITLMEGL 781


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 245/476 (51%), Gaps = 23/476 (4%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           +++   PD VT+ +LI+GLC +S   EA     ++   GC PD FTY T+++G C+ S  
Sbjct: 248 MRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 307

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A  L ++        G V  P+ VTY ++I+GLC EG V++A EL  + + K IKP++
Sbjct: 308 QEATELLKDAVFK----GFV--PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 361

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           V Y S+++G C       A ++  EM ++G  P++ T+N++++ LCK G + +A+ +++ 
Sbjct: 362 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND 421

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
            I  G  PD FT+NTL+DG+C   +++ A +L   M   G      +Y+ ++NG CK  +
Sbjct: 422 AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 481

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +      + EM+ KG  P+ + +N L       +++E A K+  +M + G+  D  ++ T
Sbjct: 482 VNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNT 541

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I G C+NG +  A  LF  L           +N+LI        + +A ++F  +    
Sbjct: 542 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 601

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
              +  TY ++I G C    +D+A    ++M +   +P++ TF  +I      +   + +
Sbjct: 602 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAV 661

Query: 435 ELLHKMKEINVMPD-------------ASIVSIVVDLLAKNEISLNSLPSFTV-HE 476
            ++H M +I V+P+             A+   +V DL+ K  I   S P++ V HE
Sbjct: 662 GIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHI---SYPTYEVLHE 714



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/437 (33%), Positives = 223/437 (51%), Gaps = 11/437 (2%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L +  +PD  T T  ++  C  +R   A  L   L   G       Y T+V GL    
Sbjct: 111 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHG 166

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           HT  A  LF++M + +        PN   +  ++  LCK G V +A  LL ++  + +  
Sbjct: 167 HTHDARQLFDQMLHTH------VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 220

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N+ TY   IRG C A    EA RL   M    V P+VVT+N ++  LCK     EA   L
Sbjct: 221 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 279

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  G  PD FTYNT++DG+C    V  A EL       G      +Y  LING C  
Sbjct: 280 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 339

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            ++E AL L++E  +KGIKPD+V++N+L  GL     +  A ++ +EM   G   D  TY
Sbjct: 340 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 399

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+GLCK G I +A  + +   +     D+  +N+LIDG CK  +L+ AL+L   +  
Sbjct: 400 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 459

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + P+ +TY+ ++ GLC  G++++  + F +M      PN IT+++LI  F R N+  +
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 519

Query: 433 VIELLHKMKEINVMPDA 449
             +++ KM +  + PDA
Sbjct: 520 ASKVIVKMSQEGLHPDA 536



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 215/428 (50%), Gaps = 12/428 (2%)

Query: 2   GRVSHGFV-----VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG       +  ++L +   P+   F  ++  LC    ++EA  L  K+   G   
Sbjct: 161 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 220

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           ++FTY   + GLC       A+ L + M      + V   P+ VTY T+I GLCK+    
Sbjct: 221 NLFTYNIWIRGLCEAGRLPEAVRLVDGMR----AYAV---PDVVTYNTLIRGLCKKSMPQ 273

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A   L +M ++   P+  TY ++I G+C      EA  L  + + +G  P+ VT+  ++
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           + LC  G ++ A  L +     G++PD   YN+L+ G CL G + HA ++   M   GC 
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 393

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             + +Y+I+ING CK   I  A  + ++ + KG  PDV   NTL  G  +  +++ A +L
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 453

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            + M   G+A DT TY + ++GLCK G + E  E F  + +  C  +   YN LI+  C+
Sbjct: 454 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 513

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           S ++E A ++   +    L P+ V+++ +I G C +G ++ A  LF  +EE        T
Sbjct: 514 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADT 573

Query: 417 FDMLIRGF 424
           F+ LI  F
Sbjct: 574 FNTLIGAF 581



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 206/436 (47%), Gaps = 11/436 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           + + I+      R+ +A   F ++ +F C P    Y  +++ L   ++   A  ++  M 
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM- 112

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                      P+  T+T  +   C       A  LL  +  +      V Y +V+ G  
Sbjct: 113 -----LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLY 163

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                ++A++LF +M+   V PN+  FN ++  LCK G + EA  LL  +IQ G+  + F
Sbjct: 164 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 223

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN  + G C  GR+  A  L   M +      V +Y+ LI G CK    + A+     M
Sbjct: 224 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRM 282

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           +++G  PD   +NT+  G  +I  V+ A +L  +    G   D  TY + I+GLC  G +
Sbjct: 283 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 342

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A+ELF+  +    + DI  YNSL+ GLC  G +  AL++   +      P++ TY+I+
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I GLC  G +  A  +  D      +P+V TF+ LI G+ +  +    ++L+ +M E  +
Sbjct: 403 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462

Query: 446 MPDASIVSIVVDLLAK 461
            PD    + V++ L K
Sbjct: 463 APDTITYNSVLNGLCK 478



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 6/275 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +S   VV+   +   + PD  TF +LI G C   ++  A  L  ++  +G  PD  T
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 468

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +++NGLC+          F+EM          C PN +TY  +I+  C+   +++A +
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEMILKG------CHPNPITYNILIENFCRSNKMEEASK 522

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++++M  + + P+ V++ ++I GFC   D   A  LF ++ ++G      TFN ++    
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 582

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
               M  A ++ D M+  G R D++TY  L+DG C T  V+ A    V M   G   ++ 
Sbjct: 583 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 642

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           ++  +IN    N  +  A+ +   M+  G+ P+VV
Sbjct: 643 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 221/418 (52%), Gaps = 7/418 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + V++  ++  LC   ++ EA +L  ++   G  PDV +Y+ +V+G C+       L L 
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EE+           +PN  TY +II  LCK G V +A+++L  MK++ I P+ V YT++I
Sbjct: 311 EELQRKG------LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLI 364

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GF  + + +   +LF EM  + + P+ VT+  ++  LC+ GK+ EA +L   M+  G++
Sbjct: 365 SGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLK 424

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY  L+DG+C  G +  A  L   M   G    V +Y+ L++G CK  E++ A  L
Sbjct: 425 PDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANEL 484

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM  KG++P+V  +N L  GL ++  +E+A KL +EM   G   DT TY T +D  CK
Sbjct: 485 LHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCK 544

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + +A EL   +     +  I  +N L++G C SG LE    L + +    ++PN  T
Sbjct: 545 MGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATT 604

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           ++ ++   C    M    +++  M    VVP+  T+++LI+G  +     K    LHK
Sbjct: 605 FNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARN-MKEAWFLHK 661



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 232/458 (50%), Gaps = 6/458 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L ++      PD V+++ ++ G C   ++ +   L  +L+  G +P+ +T
Sbjct: 265 LGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYT 324

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y ++++ LC+T   + A  +   M N          P+ V YTT+I G  K G V    +
Sbjct: 325 YNSIISFLCKTGRVVEAEQVLRVMKNQR------IFPDNVVYTTLISGFGKSGNVSVEYK 378

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +MK K I P+ VTYTS+I G C A    EA++LF EM+ +G++P+ VT+  ++D  C
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYC 438

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M EA  L + M++ G+ P+  TY  L+DG C  G V+ A EL   M   G +  V 
Sbjct: 439 KAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVC 498

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LING CK   IE A+ L  EM   G  PD + + T+     ++ ++ +A +L   M
Sbjct: 499 TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     T+   ++G C +G + +   L   +       +   +NSL+   C    +
Sbjct: 559 LDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM 618

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
              +E+++ +    +VP+  TY+I+I G C    M +A  L  +M E        +++ L
Sbjct: 619 RATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSL 678

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           I+GF +  +  +  +L  +M+    + +  I  I VD+
Sbjct: 679 IKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDV 716



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 227/428 (53%), Gaps = 7/428 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI-VALNLFE 82
           + F    + L     ++EA  LF KL  +G    V +    +  L  +   I  A  +F 
Sbjct: 182 LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR 241

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           E +    E GV    NTV+Y  I+  LC+ G V +A  LL+QM+ +   P+VV+Y+ ++ 
Sbjct: 242 EYS----EVGVCW--NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+C  +   +  +L  E+  +G++PN  T+N I+  LCK G++ EA ++L +M    + P
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D   Y TL+ GF  +G V+   +LF  M+         +Y+ +I+G C+  ++  A  L+
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           SEMLSKG+KPD V +  L  G  +  +++ AF L ++M   G+  +  TY   +DGLCK 
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G +  A EL H +     + ++  YN+LI+GLCK G +E A++L   +      P+ +TY
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++   C  G+M KA +L   M +  + P ++TF++L+ GF           L+  M +
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595

Query: 443 INVMPDAS 450
             +MP+A+
Sbjct: 596 KGIMPNAT 603



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 191/365 (52%), Gaps = 6/365 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G VS  + +   + +    PD VT+TS+I GLC   +++EA  LF+++   G +PD  TY
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++G C+      A +L  +M     E G+   PN VTYT ++DGLCK G VD A EL
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMV----EKGLT--PNVVTYTALVDGLCKCGEVDIANEL 484

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +K ++PNV TY ++I G C   +  +A +L  EM   G  P+ +T+  IMD  CK
Sbjct: 485 LHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCK 544

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+M +A  LL +M+  G++P   T+N L++GFC++G +   + L   M   G      +
Sbjct: 545 MGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATT 604

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ L+  YC    +   + +Y  M ++G+ PD   +N L  G  +   ++ A+ L  EM 
Sbjct: 605 FNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMV 664

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G +    +Y + I G  K     EA +LF  +R      +   Y+  +D   + G  E
Sbjct: 665 EKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWE 724

Query: 362 IALEL 366
             LEL
Sbjct: 725 NTLEL 729



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 199/400 (49%), Gaps = 6/400 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     VL  +      PD V +T+LI G      +     LF +++     PD  TY
Sbjct: 336 GRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTY 395

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T++++GLC+    + A  LF EM +         +P+ VTYT +IDG CK G + +A  L
Sbjct: 396 TSMIHGLCQAGKVVEARKLFSEMLSKG------LKPDEVTYTALIDGYCKAGEMKEAFSL 449

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM +K + PNVVTYT+++ G C   + + A  L  EM ++G+QPNV T+N +++ LCK
Sbjct: 450 HNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCK 509

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +++A +L++ M   G  PD  TY T++D +C  G +  A EL   M   G + T+ +
Sbjct: 510 VGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVT 569

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++L+NG+C +  +E    L   ML KGI P+    N+L       + +    +++  M 
Sbjct: 570 FNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMH 629

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  DT TY   I G CK   + EA  L   +          +YNSLI G  K  + E
Sbjct: 630 AQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFE 689

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            A +LF  +     +     Y I +     +G  +   +L
Sbjct: 690 EARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 167/309 (54%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A R+F E  + GV  N V++N+I+  LC+ GK+ EA  LL  M   G  PD  +Y+ ++D
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C   ++    +L   ++  G K   ++Y+ +I+  CK   +  A  +   M ++ I P
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D V++ TL  G  +   V   +KLFDEM+R  +  D  TY + I GLC+ G +VEA +LF
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +     + D   Y +LIDG CK+G ++ A  L   +    L PNVVTY+ ++ GLC  
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G++D A +L  +M E  + PNV T++ LI G  ++    + ++L+ +M      PD    
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535

Query: 453 SIVVDLLAK 461
           + ++D   K
Sbjct: 536 TTIMDAYCK 544



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 154/298 (51%), Gaps = 6/298 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +  ++++   TP+ VT+T+L+ GLC    +  A  L  ++   G +P+V TY
Sbjct: 441 GEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTY 500

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGLC+  +   A+ L EEM +  G F     P+T+TYTTI+D  CK G + KA EL
Sbjct: 501 NALINGLCKVGNIEQAVKLMEEM-DLAGFF-----PDTITYTTIMDAYCKMGEMAKAHEL 554

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M DK ++P +VT+  ++ GFC +    + +RL   M+D+G+ PN  TFN +M + C 
Sbjct: 555 LRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI 614

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              M     +   M   GV PD  TYN L+ G C    +  A  L   M   G   T  S
Sbjct: 615 RNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAAS 674

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           Y+ LI G+ K K+ E A  L+ EM + G   +  I++      +E    E   +L DE
Sbjct: 675 YNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 172/337 (51%), Gaps = 9/337 (2%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
            +RL     D G  P  + F+V    L + G + EA +L D ++ +GV     + N  L 
Sbjct: 167 TERLIYTYKDWGAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLA 224

Query: 213 GFCLT-GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
               +   +  A  +F     +G      SY+I+++  C+  +++ A SL  +M  +G  
Sbjct: 225 RLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV 284

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PDVV ++ +  G  ++ Q+ +  KL +E+QR G+  + +TY + I  LCK G +VEA ++
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
              ++  +   D   Y +LI G  KSG + +  +LF  +    +VP+ VTY+ MI GLC 
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G++ +AR LF +M    + P+ +T+  LI G+ +  E  +   L ++M E  + P+   
Sbjct: 405 AGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464

Query: 452 VSIVVDLLAK-NEISL-NSLPSFTVHEQQEEVDESNV 486
            + +VD L K  E+ + N L    +HE  E+  + NV
Sbjct: 465 YTALVDGLCKCGEVDIANEL----LHEMSEKGLQPNV 497



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 6/197 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG ++    +L  +L     P  VTF  L+ G C    + +   L   +   G  P+  T
Sbjct: 545 MGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATT 604

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + +L+   C  ++    + +++ M       GVV  P+T TY  +I G CK   + +A  
Sbjct: 605 FNSLMKQYCIRNNMRATIEIYKGMHAQ----GVV--PDTNTYNILIKGHCKARNMKEAWF 658

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M +K       +Y S+I+GF   K + EA++LF EM   G       +++ +D   
Sbjct: 659 LHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNY 718

Query: 181 KNGKMDEASRLLDLMIQ 197
           + G  +    L D  I+
Sbjct: 719 EEGNWENTLELCDEAIE 735


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 234/447 (52%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       ++  ++     P  VT+ S++KGLC      +A  +F ++  FG  PDV ++
Sbjct: 205 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF 264

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ G CR      AL +++EM +         +P+ V+++ +I    + G +D A   
Sbjct: 265 TILIGGFCRVGEIEEALKIYKEMRHRG------IKPDLVSFSCLIGLFARRGKMDHAMAY 318

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   + P+ V YT VI GFC A   ++A R+  EM+  G  P+VVT+N +++ LCK
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 378

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ +A  LL+ M + GV PD  T+ TL+ G+C+ G+++ A +LF +M +   +  + +
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G C+  +++ A  L+ +M S+ I P+ V ++ L     E  QVE AF   DEM 
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY + I G C++G + +  +    + + K   D+  YN+LI G  K  ++ 
Sbjct: 499 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 558

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L   +    + P+VVTY+++I G    G + +A  +F  M    + P+  T+  +I
Sbjct: 559 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 618

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            G +      +  +L  +M +    PD
Sbjct: 619 NGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 226/436 (51%), Gaps = 6/436 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           +  T   ++   C      +  A+ +++      PDV T+  +V+   R      A+ L 
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + M +         +P  VTY +++ GLC+ G  DKA E+  +M D  + P+V ++T +I
Sbjct: 215 DSMVSKG------LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILI 268

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GFC   +  EA +++ EM  +G++P++V+F+ ++    + GKMD A   L  M   G+ 
Sbjct: 269 GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLV 328

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD   Y  ++ GFC  G ++ A  +   M   GC   V +Y+ L+NG CK + +  A  L
Sbjct: 329 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 388

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
            +EM  +G+ PD+    TL  G     ++++A +LFD M    +  D  TY T IDG+C+
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 448

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + +A +L+  +   +   +   Y+ LID  C+ G++E A      +    ++PN++T
Sbjct: 449 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 508

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ +I G C  G + K +     M  N V P++IT++ LI G+I+ ++     +LL+ M+
Sbjct: 509 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 568

Query: 442 EINVMPDASIVSIVVD 457
           +  V PD    +++++
Sbjct: 569 KEKVQPDVVTYNMLIN 584



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 192/366 (52%), Gaps = 6/366 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +   +      PD V+F+ LI       ++  A A   ++R FG  PD   
Sbjct: 274 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 333

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT ++ G CR      AL + +EM       G  C P+ VTY T+++GLCKE  +  A+ 
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMV------GCGCLPDVVTYNTLLNGLCKERRLLDAEG 387

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M+++ + P++ T+T++I G+C     ++A +LF  M++Q ++P++VT+N ++D +C
Sbjct: 388 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 447

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G +D+A+ L D M    + P+  TY+ L+D  C  G+V  A      M + G    + 
Sbjct: 448 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 507

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I GYC++  +        +M+   + PD++ +NTL  G  +  ++  AFKL + M
Sbjct: 508 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 567

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           ++  V  D  TY   I+G   +G + EA  +F  +     E D   Y S+I+G   +G  
Sbjct: 568 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 627

Query: 361 EIALEL 366
           + A +L
Sbjct: 628 KEAFQL 633



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 210/439 (47%), Gaps = 6/439 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++  +L S  TP    F  LI+      +  EA   F  +              L+  L 
Sbjct: 73  IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALS 132

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R     +A + +  + + N E       NT T   ++   CK    DK   ++ +M+ + 
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEV------NTYTLNIMVHNYCKALEFDKVDAVISEMEKRC 186

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+VVT+  ++     A D   A  L   M+ +G++P +VT+N ++  LC++G  D+A 
Sbjct: 187 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAW 246

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +   M   GV PD  ++  L+ GFC  G +  A +++  M   G K  + S+S LI  +
Sbjct: 247 EVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF 306

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +  +++ A++   EM   G+ PD VI+  +  G      +  A ++ DEM   G   D 
Sbjct: 307 ARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDV 366

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY T ++GLCK   +++A  L + +R      D+  + +LI G C  G+L+ AL+LF +
Sbjct: 367 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 426

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    L P++VTY+ +I G+C  G +DKA DL+ DM    + PN +T+ +LI       +
Sbjct: 427 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 486

Query: 430 PSKVIELLHKMKEINVMPD 448
                  L +M    ++P+
Sbjct: 487 VEDAFGFLDEMINKGILPN 505



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 179/330 (54%), Gaps = 2/330 (0%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N + N  T   ++  +C A ++++   +  EM  + V P+VVT NV++D   + G  + A
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L+D M+  G++P   TYN++L G C +G  + A E+F  M+  G    V S++ILI G
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH-QVERAFKLFDEMQRNGVAA 307
           +C+  EIE AL +Y EM  +GIKPD+V  + L +GLF    +++ A     EM+  G+  
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL-IGLFARRGKMDHAMAYLREMRCFGLVP 329

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D   Y   I G C+ G + +A+ +   +    C  D+  YN+L++GLCK  RL  A  L 
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    + P++ T++ +I G C +G++DKA  LF  M    + P+++T++ LI G  R 
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 449

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +  K  +L   M    + P+    SI++D
Sbjct: 450 GDLDKANDLWDDMHSREIFPNHVTYSILID 479



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 162/330 (49%)

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           +E++  +   +  P    +  +IR +  ++   EA   F  ++D  V       N ++  
Sbjct: 71  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 130

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L + G    A+    L+       + +T N ++  +C     +    +   ME       
Sbjct: 131 LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 190

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +++++++   +  + E A++L   M+SKG+KP +V +N++  GL      ++A+++F 
Sbjct: 191 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 250

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM   GVA D  ++   I G C+ G I EA++++  +R    + D+ +++ LI    + G
Sbjct: 251 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 310

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           +++ A+   R + C  LVP+ V Y+++IGG C  G M  A  +  +M     +P+V+T++
Sbjct: 311 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYN 370

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            L+ G  +         LL++M+E  V PD
Sbjct: 371 TLLNGLCKERRLLDAEGLLNEMRERGVPPD 400



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 2/303 (0%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           QP V  F++++    ++ K  EA     L++ H V   A   N LL      G  + A +
Sbjct: 85  QPRV--FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 142

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            +  + S   +   ++ +I+++ YCK  E +   ++ SEM  + + PDVV HN +    F
Sbjct: 143 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 202

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                E A  L D M   G+     TY + + GLC++G   +A E+F  +       D+R
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           ++  LI G C+ G +E AL++++ +    + P++V++S +IG     G+MD A     +M
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
               +VP+ + + M+I GF R    S  + +  +M     +PD    + +++ L K    
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382

Query: 466 LNS 468
           L++
Sbjct: 383 LDA 385


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/402 (34%), Positives = 213/402 (52%), Gaps = 6/402 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +F  +IKG C    + +   +  ++   G  P+V  YTTL++G C+         LF
Sbjct: 163 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLF 222

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M    GE  VV   N  TYT +I+G  K G      EL  +MK   I PNV TY S+I
Sbjct: 223 YKM----GELDVVA--NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 276

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C     N A  LF EM ++GV  NVVT+N ++  LC+  ++ EA RL+  M + G+ 
Sbjct: 277 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 336

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  +YNTL+DG+C  G ++ A  LF  M+S G   ++ +Y+ILI G+ + K   G   +
Sbjct: 337 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 396

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM ++G+ P  V +  L   L     +E+AF+++  M++ G+ AD + Y   I GLC 
Sbjct: 397 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 456

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA +LF +L  +  + +   YN++I G CK G    AL L + +    +VPNV +
Sbjct: 457 VGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 516

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           Y+  I  LC D +  +A  L  DM E  + P++  ++M+ + 
Sbjct: 517 YNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 558



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 222/437 (50%), Gaps = 7/437 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             P + TF +L+  L   +   +A  +F + +    + DV+++  ++ G C   +     
Sbjct: 126 LVPGSNTFNNLLILLIKSNFFEKAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGF 184

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            +  +M     E G+   PN V YTT+IDG CK G +++ K+L  +M + ++  N  TYT
Sbjct: 185 EVLGQME----EMGL--SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYT 238

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I GF       +   L+ +M   G+ PNV T+N ++   C +GK++ A  L D M + 
Sbjct: 239 VLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRER 298

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV  +  TYNTL+ G C   RV  A+ L   M+  G    + SY+ LI+GYC    ++ A
Sbjct: 299 GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA 358

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            SL+++M S G  P +  +N L  G  E         +  EM+  G++    TY   +D 
Sbjct: 359 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 418

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L ++  I +A +++ ++       DI  Y  LI GLC  G ++ A +LF+SL    L PN
Sbjct: 419 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 478

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ MI G C +G   +A  L  +M EN +VPNV +++  I+   +  + ++   LL 
Sbjct: 479 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLK 538

Query: 439 KMKEINVMPDASIVSIV 455
            M E+ + P  SI +++
Sbjct: 539 DMIELGLKPSISIWNMI 555



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 211/423 (49%), Gaps = 7/423 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A   F ++   G  P   T+  L+  L +++    A  +F E   GN +  V       
Sbjct: 113 QALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVY------ 165

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++  +I G C+ G++DK  E+L QM++  + PNVV YT++I G C   D    K+LF +M
Sbjct: 166 SFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKM 225

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +  V  N  T+ V+++   K G   +   L + M   G+ P+ +TYN+++   C  G++
Sbjct: 226 GELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKL 285

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N+A ELF  M   G    V +Y+ LI G C+ + +  A  L   M   G+ P+++ +NTL
Sbjct: 286 NNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTL 345

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G   I  +++A  LF++M+ +G +    TY   I G  +        ++   +     
Sbjct: 346 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGL 405

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
                 Y  L+D L +S  +E A +++ S+    LV ++  Y ++I GLC  G M +A  
Sbjct: 406 SPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASK 465

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           LF  ++E  + PN + ++ +I G+ +     + + LL +M E  ++P+ +  +  + +L 
Sbjct: 466 LFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILC 525

Query: 461 KNE 463
           K+E
Sbjct: 526 KDE 528



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 191/385 (49%), Gaps = 6/385 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +  GF VLG++ +   +P+ V +T+LI G C    I     LF K+       + +T
Sbjct: 177 VGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYT 236

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+NG  +       + L+E+M       G+V  PN  TY ++I   C +G ++ A E
Sbjct: 237 YTVLINGFFKMGLKKDGIELYEKMK----LTGIV--PNVYTYNSMICRCCNDGKLNNAFE 290

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M+++ +  NVVTY ++I G C  +   EA+RL   M   G+ PN++++N ++D  C
Sbjct: 291 LFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYC 350

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G +D+AS L + M   G  P   TYN L+ GF          ++   ME+ G   +  
Sbjct: 351 SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 410

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+IL++   ++  IE A  +YS M   G+  D+ I+  L  GL  +  ++ A KLF  +
Sbjct: 411 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 470

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +  +   Y T I G CK G    A+ L   +       ++ +YNS I  LCK  + 
Sbjct: 471 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKW 530

Query: 361 EIALELFRSLPCGVLVPNVVTYSIM 385
             A  L + +    L P++  ++++
Sbjct: 531 TEAEVLLKDMIELGLKPSISIWNMI 555



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 180/359 (50%), Gaps = 1/359 (0%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           + + +  II+   +    ++A     QM  + + P   T+ +++     +  + +A R+F
Sbjct: 94  HVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 153

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            E     V+ +V +F +++   C+ G +D+   +L  M + G+ P+   Y TL+DG C  
Sbjct: 154 NET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 212

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G +   K+LF  M  +      ++Y++LING+ K    +  + LY +M   GI P+V  +
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++        ++  AF+LFDEM+  GVA +  TY T I GLC+   ++EA  L   ++ 
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                ++ +YN+LIDG C  G L+ A  LF  +      P++ TY+I+I G         
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 392

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
             D+  +ME   + P+ +T+ +L+   +R +   K  ++   M++  ++ D  I  +++
Sbjct: 393 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLI 451



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 140/321 (43%), Gaps = 41/321 (12%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG    G  +  ++  +   P+  T+ S+I   C + ++  A  LF ++R  G   +V T
Sbjct: 247 MGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVT 306

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+ GLC+    + A  L   M            PN ++Y T+IDG C  G +DKA  
Sbjct: 307 YNTLIGGLCQERRVLEAERLMCRMKRDG------LSPNLISYNTLIDGYCSIGNLDKASS 360

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL- 179
           L  QMK     P++ TY  +I GF  AK+      +  EM  +G+ P+ VT+ ++MD L 
Sbjct: 361 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 420

Query: 180 ----------------------------------CKNGKMDEASRLLDLMIQHGVRPDAF 205
                                             C  G M EAS+L   + +  ++P+  
Sbjct: 421 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 480

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            YNT++ G+C  G    A  L   M   G    V SY+  I   CK+++   A  L  +M
Sbjct: 481 IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDM 540

Query: 266 LSKGIKPDVVIHNTLFVGLFE 286
           +  G+KP + I N +    F+
Sbjct: 541 IELGLKPSISIWNMISKARFD 561


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 245/476 (51%), Gaps = 23/476 (4%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           +++   PD VT+ +LI+GLC +S   EA     ++   GC PD FTY T+++G C+ S  
Sbjct: 250 MRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 309

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A  L ++        G V  P+ VTY ++I+GLC EG V++A EL  + + K IKP++
Sbjct: 310 QEATELLKDAVFK----GFV--PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 363

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           V Y S+++G C       A ++  EM ++G  P++ T+N++++ LCK G + +A+ +++ 
Sbjct: 364 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMND 423

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
            I  G  PD FT+NTL+DG+C   +++ A +L   M   G      +Y+ ++NG CK  +
Sbjct: 424 AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 483

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +      + EM+ KG  P+ + +N L       +++E A K+  +M + G+  D  ++ T
Sbjct: 484 VNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNT 543

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I G C+NG +  A  LF  L           +N+LI        + +A ++F  +    
Sbjct: 544 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 603

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
              +  TY ++I G C    +D+A    ++M +   +P++ TF  +I      +   + +
Sbjct: 604 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAV 663

Query: 435 ELLHKMKEINVMPD-------------ASIVSIVVDLLAKNEISLNSLPSFTV-HE 476
            ++H M +I V+P+             A+   +V DL+ K  I   S P++ V HE
Sbjct: 664 GIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHI---SYPTYEVLHE 716



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 147/437 (33%), Positives = 223/437 (51%), Gaps = 11/437 (2%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L +  +PD  T T  ++  C  +R   A  L   L   G       Y T+V GL    
Sbjct: 113 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHG 168

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           HT  A  LF++M + +        PN   +  ++  LCK G V +A  LL ++  + +  
Sbjct: 169 HTHDARQLFDQMLHTH------VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 222

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N+ TY   IRG C A    EA RL   M    V P+VVT+N ++  LCK     EA   L
Sbjct: 223 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 281

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  G  PD FTYNT++DG+C    V  A EL       G      +Y  LING C  
Sbjct: 282 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 341

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            ++E AL L++E  +KGIKPD+V++N+L  GL     +  A ++ +EM   G   D  TY
Sbjct: 342 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 401

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I+GLCK G I +A  + +   +     D+  +N+LIDG CK  +L+ AL+L   +  
Sbjct: 402 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 461

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             + P+ +TY+ ++ GLC  G++++  + F +M      PN IT+++LI  F R N+  +
Sbjct: 462 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 521

Query: 433 VIELLHKMKEINVMPDA 449
             +++ KM +  + PDA
Sbjct: 522 ASKVIVKMSQEGLHPDA 538



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 215/428 (50%), Gaps = 12/428 (2%)

Query: 2   GRVSHGFV-----VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  +HG       +  ++L +   P+   F  ++  LC    ++EA  L  K+   G   
Sbjct: 163 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 222

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           ++FTY   + GLC       A+ L + M      + V   P+ VTY T+I GLCK+    
Sbjct: 223 NLFTYNIWIRGLCEAGRLPEAVRLVDGMR----AYAV---PDVVTYNTLIRGLCKKSMPQ 275

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A   L +M ++   P+  TY ++I G+C      EA  L  + + +G  P+ VT+  ++
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 335

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           + LC  G ++ A  L +     G++PD   YN+L+ G CL G + HA ++   M   GC 
Sbjct: 336 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 395

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             + +Y+I+ING CK   I  A  + ++ + KG  PDV   NTL  G  +  +++ A +L
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            + M   G+A DT TY + ++GLCK G + E  E F  + +  C  +   YN LI+  C+
Sbjct: 456 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 515

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           S ++E A ++   +    L P+ V+++ +I G C +G ++ A  LF  +EE        T
Sbjct: 516 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADT 575

Query: 417 FDMLIRGF 424
           F+ LI  F
Sbjct: 576 FNTLIGAF 583



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 211/448 (47%), Gaps = 13/448 (2%)

Query: 16  KSCFTPDAVT--FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +S  +P  +   + + I+      R+ +A   F ++ +F C P    Y  +++ L   ++
Sbjct: 44  RSRLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAY 103

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  ++  M            P+  T+T  +   C       A  LL  +  +     
Sbjct: 104 HDQAHKVYVRM------LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG---- 153

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            V Y +V+ G       ++A++LF +M+   V PN+  FN ++  LCK G + EA  LL 
Sbjct: 154 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 213

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            +IQ G+  + FTYN  + G C  GR+  A  L   M +      V +Y+ LI G CK  
Sbjct: 214 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKS 272

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
             + A+     M+++G  PD   +NT+  G  +I  V+ A +L  +    G   D  TY 
Sbjct: 273 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 332

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I+GLC  G +  A+ELF+  +    + DI  YNSL+ GLC  G +  AL++   +   
Sbjct: 333 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 392

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P++ TY+I+I GLC  G +  A  +  D      +P+V TF+ LI G+ +  +    
Sbjct: 393 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 452

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++L+ +M E  + PD    + V++ L K
Sbjct: 453 LQLVERMWEYGIAPDTITYNSVLNGLCK 480



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 6/275 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +S   VV+   +   + PD  TF +LI G C   ++  A  L  ++  +G  PD  T
Sbjct: 411 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 470

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +++NGLC+          F+EM          C PN +TY  +I+  C+   +++A +
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEMILKG------CHPNPITYNILIENFCRSNKMEEASK 524

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++++M  + + P+ V++ ++I GFC   D   A  LF ++ ++G      TFN ++    
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 584

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
               M  A ++ D M+  G R D++TY  L+DG C T  V+ A    V M   G   ++ 
Sbjct: 585 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 644

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           ++  +IN    N  +  A+ +   M+  G+ P+VV
Sbjct: 645 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 231/441 (52%), Gaps = 6/441 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ +++  LC  S++ +   L  +++  G  P+  TY  LV+G C+      A  +
Sbjct: 244 PDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEV 303

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E M  G G       P+  TY T++ GLC EG +D+A  L  +M+   + P+VVTY ++
Sbjct: 304 IELMT-GKGML-----PDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTL 357

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G    +  + A +L  EM  +GV+ N VT N+++   C  GK+DEAS ++  M++ G 
Sbjct: 358 IDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGF 417

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD FTYNT+++G+C  G++  A ++   M   G K   F+ + L++  C  K+++ A +
Sbjct: 418 SPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYT 477

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +   +G   D V + TL +G F+  Q +RA KL++EM+  G+ A   TY T I GLC
Sbjct: 478 LTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLC 537

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            +G   +AV+  + L       D    N +I G C  G +E A +    +    L P++ 
Sbjct: 538 LSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIF 597

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T +I++ GLC +G ++K   LF          + +T++++I  F +        +L+ +M
Sbjct: 598 TCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEM 657

Query: 441 KEINVMPDASIVSIVVDLLAK 461
           +  N+ PD    + +V  L K
Sbjct: 658 EGKNLEPDRYTYNAIVTGLTK 678



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 241/459 (52%), Gaps = 11/459 (2%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           G  +  ++ +  F P+ +T  +L+  L    +   ++ +  +F      G +P+V T+  
Sbjct: 157 GHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNI 216

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++G C  ++T  AL L  +M    GE+G  C P+ VTY T++  LCK   + + ++LLL
Sbjct: 217 LIHGYCSDNNTEEALRLINQM----GEYG--CCPDNVTYNTVLTALCKRSQLTQVRDLLL 270

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           QMK+  + PN  TY  ++ G+C  K   EA  +   M  +G+ P+V T+N ++  LC  G
Sbjct: 271 QMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK-ELFVSMESMGCKHTVFSY 242
           K+DEA RL D M    + PD  TYNTL+DG C   R + A  +L   M++ G K    ++
Sbjct: 331 KIDEAVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTH 389

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +I+I  +C   +I+ A ++  +M+  G  PD   +NT+  G  +  ++  A+K+ DEM R
Sbjct: 390 NIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGR 449

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  DT+T  T +  +C    + +A  L    R      D   Y +LI G  K  + + 
Sbjct: 450 KGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADR 509

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           AL+L+  +    +V  ++TY+ +I GLC  G+ D+A D   ++ E  +VP+  T +++I 
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIH 569

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           G+       K  +  +KM E ++ PD    +I++  L +
Sbjct: 570 GYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCR 608



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 207/464 (44%), Gaps = 54/464 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+ ++++GLC E +I EA  L  K+  F   PDV TY TL++G      +  A  L
Sbjct: 314 PDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKL 373

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            EEM A G  E       N VT+  +I   C EG +D+A  ++++M +    P+  TY +
Sbjct: 374 VEEMKARGVKE-------NGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNT 426

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC------------------- 180
           +I G+C A    EA ++  EM  +G++ +  T N ++  +C                   
Sbjct: 427 MINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRG 486

Query: 181 ----------------KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
                           K+ + D A +L + M + G+     TYNT++ G CL+G+ + A 
Sbjct: 487 YILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAV 546

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +    +   G      + +I+I+GYC    +E A   +++M+   +KPD+   N L  GL
Sbjct: 547 DKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGL 606

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
                +E+   LF+     G   DT TY   I   CK   + +A +L   +     E D 
Sbjct: 607 CREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDR 666

Query: 345 RAYNSLIDGLCKSGRLEIALELF-------RSLPCGVLVPNVVT----YSIMIGGLCNDG 393
             YN+++ GL K+GR E A +L        + +      P + T    YS  I  LC  G
Sbjct: 667 YTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQG 726

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +   A  LF   E+  V  N  T+  L+ G ++  +      LL
Sbjct: 727 KYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLL 770



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 181/366 (49%), Gaps = 17/366 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     V+ ++++S F+PD  T+ ++I G C   ++ EA  +  ++   G + D FT 
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++ +C       A  L  +      + G + +   VTY T+I G  K+   D+A +L
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKAR----KRGYILDE--VTYGTLIMGYFKDEQADRALKL 513

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK+  I   ++TY ++IRG C +   ++A     E++++G+ P+  T N+I+   C 
Sbjct: 514 WEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCW 573

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +++A +  + M++H ++PD FT N LL G C  G +     LF +  S G      +
Sbjct: 574 EGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVT 633

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL---FD 298
           Y+I+I+ +CK + +E A  L +EM  K ++PD   +N +  GL +  + E A KL   F 
Sbjct: 634 YNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFA 693

Query: 299 EMQRNGVAADT--------WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E  +     DT          Y   I  LC  G   +A++LF          +   Y  L
Sbjct: 694 EKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKL 753

Query: 351 IDGLCK 356
           +DGL K
Sbjct: 754 MDGLLK 759



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 52/315 (16%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++   + +  +  K  +  D VT+ +LI G   + +   A  L+ +++  G    + TY 
Sbjct: 471 QLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYN 530

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T++ GLC +  T  A++   E+     E G+V  P+  T   II G C EG V+KA +  
Sbjct: 531 TIIRGLCLSGKTDQAVDKLNELL----EKGLV--PDESTSNIIIHGYCWEGAVEKAFQFH 584

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M + ++KP++ T   ++RG C      +   LF   + +G   + VT+N+I+   CK 
Sbjct: 585 NKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKE 644

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF---------------------------- 214
            ++++A  L+  M    + PD +TYN ++ G                             
Sbjct: 645 RRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDT 704

Query: 215 ------------------CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
                             C  G+   A +LF   E  G     ++Y  L++G  K ++  
Sbjct: 705 SPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSF 764

Query: 257 GALSLYSEMLSKGIK 271
              SL   M+S  I+
Sbjct: 765 TTTSLLPFMVSATIQ 779



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F    ++++    PD  T   L++GLC E  + +   LF      G   D  TY
Sbjct: 575 GAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTY 634

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++  C+      A +L  EM   N       EP+  TY  I+ GL K G  ++A++L
Sbjct: 635 NIIISSFCKERRLEDAFDLMTEMEGKN------LEPDRYTYNAIVTGLTKAGRTEEAEKL 688

Query: 122 LL-------QMKDKNIKPNVVT----YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
            L       Q+K ++  P + T    Y+  I   C    + +A +LF +   +GV  N  
Sbjct: 689 ALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKY 748

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           T+  +MD L K  K    + LL  M+   ++
Sbjct: 749 TYIKLMDGLLKRRKSFTTTSLLPFMVSATIQ 779


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 231/438 (52%), Gaps = 7/438 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    F  +IKGL  +    +A +LF ++   G  PD FTY  L++ LC+      ALNL
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           +E+M     E GV  +P  VTY +++   C  G +D+A +L  +M  K   PNVVTYT++
Sbjct: 409 WEKM----NETGV--KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G      +++A  L  EM   GV  N  T+N +++ LC  G++ E   +L      G 
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P A TYN++++GF   G +  A  ++  M + G    + +Y+  I+GYCK    + AL 
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + +++  KG++PD+  +N+L  G  +   +  A ++   M ++G+  +   Y +FI G  
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYK 642

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
               + EA+ L+  +     + D   Y +LIDG  K G +  AL+L+  +     +P+ +
Sbjct: 643 NLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHI 702

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++ +  GLC +G +D AR L  +M    + PNV+ ++MLI G++R  +  +   L  +M
Sbjct: 703 TFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEM 762

Query: 441 KEINVMPDASIVSIVVDL 458
            E  +MPD +   I+V +
Sbjct: 763 LERKIMPDDTTYDILVGM 780



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 230/459 (50%), Gaps = 7/459 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
            +   +VL ++  + F P   TF S++  L    R+ EA  +  +L   G +  V   TT
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++G C       AL++FEE        G+V  P  VTYT +I G  +EG  +KA EL  
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRD----GLV--PTDVTYTVLIRGCTEEGMPEKAYELCR 341

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           QM+D  + P+   +  VI+G    K W +A  LF EM D G+ P+  T+N+++  LC+  
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRR 400

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ EA  L + M + GV+P   TY++LL  +C+ G ++ A +L+  M   G    V +Y+
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            L+ G+      + A +L +EM   G+  +   +NTL  GL  + +V    ++    +  
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE 520

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G      TY + I+G  K G +  A  ++  +       +I  Y S IDG CK+   ++A
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L++   + C  L P++  Y+ +I G C +G M  A  + + M ++ ++PN+  ++  I G
Sbjct: 581 LKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +  +    + + L  KM +  +  D +  + ++D  +K+
Sbjct: 641 YKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKD 679



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 213/464 (45%), Gaps = 40/464 (8%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           DA  F  +++    E    +A  LF ++     EPD    +  +  LC+      AL + 
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M +     G V  P   T+ +++D L K G +++A  +  ++     K +VV  T+++
Sbjct: 236 RKMQDA----GFV--PWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLM 289

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C  ++  +A  +F E +  G+ P  VT+ V++    + G  ++A  L   M  HG+ 
Sbjct: 290 HGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349

Query: 202 ----------------------------------PDAFTYNTLLDGFCLTGRVNHAKELF 227
                                             PDAFTYN L+   C   ++  A  L+
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLW 409

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G K  + +Y  L+  YC N  ++ A+ LY+EM  KG  P+VV + TL  G    
Sbjct: 410 EKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINK 469

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
              ++A+ L  EM++NGV+ + +TY T I+GLC  G + E  E+               Y
Sbjct: 470 AAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTY 529

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           NS+I+G  K+G +  A  +++ +    + PN+VTY+  I G C     D A  +  D+  
Sbjct: 530 NSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC 589

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
             + P++  ++ LI GF +    S  +++L  M +  ++P+ S+
Sbjct: 590 KGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISV 633



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 174/367 (47%), Gaps = 4/367 (1%)

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           KEG  D A  L  +M    I+P+    +  I   C  +D N A  +  +M D G  P   
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDF 248

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           TFN ++D L K G+M+EA  + D ++  G +       TL+ G+CL   V  A ++F   
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G   T  +Y++LI G  +    E A  L  +M   G+ P     N +  GL      
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           + A  LF EM  +G+  D +TY   I  LC+   I EA+ L+  +     +  I  Y+SL
Sbjct: 369 KDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           +   C +G ++ A++L+  +P     PNVVTY+ ++ G  N    DKA  L  +M++N V
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
             N  T++ LI G   +    +V E+L + +    +P A   + +++   K  +  +   
Sbjct: 488 SCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS--- 544

Query: 471 SFTVHEQ 477
           +F V++Q
Sbjct: 545 AFAVYQQ 551



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 149/287 (51%), Gaps = 13/287 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +L R     F P A+T+ S+I G      +  A A++ ++   G  P++ T
Sbjct: 504 VGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVT 563

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGLCKEGFVDK 117
           YT+ ++G C+TS   +AL +  +         V C+   P+   Y ++I G C+EG +  
Sbjct: 564 YTSFIDGYCKTSCCDLALKMLND---------VRCKGLRPDIAAYNSLIFGFCQEGNMSH 614

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A ++L+ M    + PN+  Y S I G+   K   EA RL+ +M+ +G+  +  T+  ++D
Sbjct: 615 ALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLID 674

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
              K+G +  A +L   M+  G  PD  T+  L  G C  G ++ A++L   M  +  + 
Sbjct: 675 GFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRP 734

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            V  Y++LINGY +N +++ A  L+ EML + I PD   ++ L VG+
Sbjct: 735 NVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDIL-VGM 780



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 142/322 (44%), Gaps = 36/322 (11%)

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA-------------- 204
           EM  +G   +   F+V+M    K G  D+A RL D M    + PD               
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 205 ---------------------FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
                                FT+N+++D     GR+  A  +   + + G K +V   +
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            L++GYC  +E+  AL ++ E L  G+ P  V +  L  G  E    E+A++L  +M+ +
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+   T  +   I GL  +    +AV LF  +       D   YN LI  LC+  ++  A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREA 405

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L L+  +    + P +VTY  ++   C +G MD+A  L+ +M      PNV+T+  L++G
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 424 FIRINEPSKVIELLHKMKEINV 445
            I      K   LL +MK+  V
Sbjct: 466 HINKAAFDKAYALLAEMKQNGV 487



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 7/293 (2%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   GV PDA +   LL     +     A  L   M   G     + + +++    K   
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            + A+ L+ EM +  I+PD  + +     L ++    RA  +  +MQ  G     +T+ +
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +D L K G + EA+ +   L     +  +    +L+ G C    +  AL++F       
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           LVP  VTY+++I G   +G  +KA +L   M ++ ++P+   F+M+I+G +        +
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNVK 487
            L  +M +  + PDA   +I++  L +      +L  +      E+++E+ VK
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLW------EKMNETGVK 418


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 244/512 (47%), Gaps = 66/512 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     ++ R+ +   +P+   + +LI  LC      EA  LF ++   G  P+  TY
Sbjct: 346 GKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTY 405

Query: 62  TTLVNGLCRTSHTIVALNLFEEM---------------ANGNGEFGVVC----------- 95
           + L++  CR      AL+   EM                NG+ +FG +            
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMIN 465

Query: 96  ---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              EP  VTYT+++ G C +G ++KA  L  +M  K I P++ T+T+++ G   A    +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRD 525

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A +LF EM +  V+PN VT+NV+++  C+ G M +A   L+ MI+ G+ PD ++Y  L+ 
Sbjct: 526 AVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIH 585

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS------------ 260
           G CLTG+ + AK     +    C+     Y+ L++G+C+  ++E ALS            
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL 645

Query: 261 -----------------------LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
                                  L  EM  +G+KPD VI+ ++     +    + AF ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           D M   G   +  TY   I+GLCK G++ EA  L   +R      +   Y   +D L K 
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKG 765

Query: 358 -GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G ++ A+EL  ++  G+L  N  TY+++I G C  G+M++A +L   M  + V P+ IT
Sbjct: 766 VGDMKKAVELHNAILKGLLA-NTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCIT 824

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  +I    R N+  K IEL + M E  + PD
Sbjct: 825 YTTMISELCRRNDVKKAIELWNSMTEKGIRPD 856



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 235/511 (45%), Gaps = 76/511 (14%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           ++  R+ K    P+ VT++ LI   C   ++  A +   ++   G +P V+ Y +L+NG 
Sbjct: 388 LLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGH 447

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C+      A +L  EM N         EP  VTYT+++ G C +G ++KA  L  +M  K
Sbjct: 448 CKFGDISAAESLMAEMINKK------LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            I P++ T+T+++ G   A    +A +LF EM +  V+PN VT+NV+++  C+ G M +A
Sbjct: 502 GIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKA 561

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
              L+ MI+ G+ PD ++Y  L+ G CLTG+ + AK     +    C+     Y+ L++G
Sbjct: 562 FEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621

Query: 249 YCKNKEIEGALS-----------------------------------LYSEMLSKGIKPD 273
           +C+  ++E ALS                                   L  EM  +G+KPD
Sbjct: 622 FCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPD 681

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            VI+ ++     +    + AF ++D M   G   +  TY   I+GLCK G++ EA  L  
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCS 741

Query: 334 TLR---------ILKCEFDI--------------------------RAYNSLIDGLCKSG 358
            +R            C  DI                            YN LI G C+ G
Sbjct: 742 KMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQG 801

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R+E A EL   +    + P+ +TY+ MI  LC    + KA +L+  M E  + P+ + ++
Sbjct: 802 RMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
            LI G     E  K  EL ++M    + P+ 
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLKPNT 892



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 221/455 (48%), Gaps = 6/455 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G  ++  +L+  F+P     +SL++GL    ++ EA  L  ++  FG  P++F Y  L++
Sbjct: 316 GLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALID 375

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            LC+  +   A  LF+ M    G+ G+   PN VTY+ +ID  C+ G +D A   L +M 
Sbjct: 376 SLCKGRNFDEAELLFDRM----GKIGLC--PNDVTYSILIDMFCRRGKLDTALSFLGEMI 429

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           D  +KP+V  Y S+I G C   D + A+ L  EM+++ ++P VVT+  +M   C  GK++
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A RL   M   G+ P  +T+ TLL G    G +  A +LF  M     K    +Y+++I
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMI 549

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            GYC+   +  A    +EM+ KGI PD   +  L  GL    Q   A    D + +    
Sbjct: 550 EGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +   Y   + G C+ G + EA+ +   + +   + D+  Y  LIDG  K    ++ L L
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGL 669

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            + +    L P+ V Y+ MI      G   +A  ++  M     VPN +T+  +I G  +
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               ++   L  KM+  N +P+       +D+L K
Sbjct: 730 AGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTK 764



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 240/529 (45%), Gaps = 83/529 (15%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALF----TKLRVFGCEPDV 58
           + S  F  L    + C    + +F  LI+      R+++   +F    TK+ +    P+V
Sbjct: 136 KPSEVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLL---PEV 192

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            T + L++GL +  H  +A+ LF++M N      V   P+   YT +I  LC+   + +A
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFDDMIN------VGIRPDVYIYTGVIRSLCELKDLSRA 246

Query: 119 KELLLQM--------------------------------KD---KNIKPNVVTYTSVIRG 143
           KE+++QM                                KD   K +KP+VVTY +++ G
Sbjct: 247 KEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCG 306

Query: 144 FCYAKDW-----------------------------------NEAKRLFIEMMDQGVQPN 168
            C  +++                                    EA  L   + + GV PN
Sbjct: 307 LCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPN 366

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           +  +N ++D LCK    DEA  L D M + G+ P+  TY+ L+D FC  G+++ A     
Sbjct: 367 IFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLG 426

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M  MG K +V+ Y+ LING+CK  +I  A SL +EM++K ++P VV + +L  G     
Sbjct: 427 EMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKG 486

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           ++ +A +L+ EM   G+    +T+ T + GL + G I +AV+LF  +     + +   YN
Sbjct: 487 KINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYN 546

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            +I+G C+ G +  A E    +    +VP+  +Y  +I GLC  GQ  +A+     + + 
Sbjct: 547 VMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
               N I +  L+ GF R  +  + + +   M    V  D     +++D
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLID 655



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 203/456 (44%), Gaps = 78/456 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S    ++  ++     P  VT+TSL+ G C++ +I +A  L+ ++   G  P ++T+
Sbjct: 451 GDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTF 510

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++GL R      A+ LF EMA  N       +PN VTY  +I+G C+EG + KA E 
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFTEMAEWN------VKPNRVTYNVMIEGYCEEGNMSKAFEF 564

Query: 122 LLQMKDKNIKP-----------------------------------NVVTYTSVIRGFCY 146
           L +M +K I P                                   N + YT ++ GFC 
Sbjct: 565 LNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624

Query: 147 AKDWNEA-------------------------------KRLFI----EMMDQGVQPNVVT 171
                EA                               +++F+    EM D+G++P+ V 
Sbjct: 625 EGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVI 684

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  ++D   K G   EA  + DLMI  G  P+  TY  +++G C  G VN A+ L   M 
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMR 744

Query: 232 SMGCKHTVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
                    +Y   ++   K   +++ A+ L++ +L KG+  +   +N L  G     ++
Sbjct: 745 PGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRM 803

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           E A +L   M  +GV+ D  TY T I  LC+   + +A+EL++++       D  AYN+L
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           I G C +G +  A EL   +    L PN  T    I
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 113/283 (39%), Gaps = 53/283 (18%)

Query: 234 GCKHTVFSYSILING--------------------------------------------- 248
           G  H+  S+ ILI+                                              
Sbjct: 99  GFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCYEKCKLSSSSS 158

Query: 249 -------YCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
                  Y +++ +   + ++  M++K  + P+V   + L  GL +      A +LFD+M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D + Y   I  LC+   +  A E+   +    C+ +I  YN LIDGLCK  ++
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A+ + + L    L P+VVTY  ++ GLC   + +   ++  +M      P+      L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + G  +  +  + + L+ ++ E  V P+  + + ++D L K  
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGR 381


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 156/502 (31%), Positives = 245/502 (48%), Gaps = 45/502 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGRV    V  G +      PD VT+ ++IK  C E  +  A   F  L   G EP+ FT
Sbjct: 167 MGRVYSQLVQDGLL------PDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFT 220

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
              LV G CRT     A  LF  M        + C+ N  +YT +I GLC    V KA  
Sbjct: 221 CNALVLGYCRTGELRKACWLFLMMPL------MGCQRNEYSYTILIQGLCDAKCVRKALV 274

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L MK     PNV  +T +I G C +    +A+ LF  M   GV P+V+T+N ++    
Sbjct: 275 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 334

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M++A ++ +LM ++G  PD +TYNTL+ G C   +   A+EL  +    G   TV 
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVV 393

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LINGYC  ++ + AL + ++M+S   K D+ +   L   L +  +++ A +L +E+
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG+  +  TY + IDG CK+G +  A+E+   +    C+ +   YNSL+ GL K  +L
Sbjct: 454 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN-----VI 415
             A+ L   +    ++PNV+TY+ ++ G C++   D A  LF  ME+N + P+     V+
Sbjct: 514 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 573

Query: 416 T---------------------------FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           T                           +  LI GF +         L+ +M +    PD
Sbjct: 574 TDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 633

Query: 449 ASIVSIVVDLLAKNEISLNSLP 470
           +   S+++  L K +    +LP
Sbjct: 634 SYTYSVLLHALCKQKRLNEALP 655



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 244/513 (47%), Gaps = 74/513 (14%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+   FT LI GLC   R+ +A  LF  +   G  P V TY  ++ G  +      AL 
Sbjct: 285 SPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALK 344

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + +E+   NG     C P+  TY T+I GLC +   ++A+ELL     +   P VVT+T+
Sbjct: 345 I-KELMEKNG-----CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTN 397

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G+C A+ +++A R+  +MM    + ++  F  +++ L K  ++ EA  LL+ +  +G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+  TY +++DG+C +G+V+ A E+   ME  GC+   ++Y+ L+ G  K+K++  A+
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 517

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +L ++M   GI P+V+ + TL  G  + H  + AF+LF+ M++NG+  D   Y    D L
Sbjct: 518 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 320 CKNGYIVEA-----------VELFHTLRI---------------------LKCEFDIRAY 347
           CK G   EA            ++++T  I                       C  D   Y
Sbjct: 578 CKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 637

Query: 348 NSLIDGLCKSGRLEIALEL-----FRSLPCGVLV-------------------------- 376
           + L+  LCK  RL  AL +      R + C +                            
Sbjct: 638 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697

Query: 377 ----PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               P+  TY++ I   C +G+++ A DL L ME   V P+V+T+++LI G   +    +
Sbjct: 698 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 757

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
               L +M   +  P+     +++  L K  ++
Sbjct: 758 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLA 790



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 227/476 (47%), Gaps = 25/476 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     VL  + +    P+A T+ SL+ GL  + ++ +A AL TK++  G  P+V TY
Sbjct: 476 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITY 535

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL+ G C       A  LFE M   NG      +P+   Y  + D LCK G  ++A   
Sbjct: 536 TTLLQGQCDEHDFDNAFRLFE-MMEQNG-----LKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +++   K +    V YT++I GF  A + + A  L   M+D+G  P+  T++V++  LCK
Sbjct: 590 IVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 646

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA  +LD M   G++   F Y  L+D     G+ +HAK ++  M S G K +  +
Sbjct: 647 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 706

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++ IN YCK   +E A  L  +M  +G+ PDVV +N L  G   +  ++RAF     M 
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766

Query: 302 RNGVAADTWTYRTFIDGLCKN--GYIVEA--------VELFHTLRILK------CEFDIR 345
                 + WTY   +  L K    Y+           +EL  T ++L+          + 
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y+SLI G CK+GRLE A  L   +    L PN   Y+++I   C+    +KA      M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            E    P + ++ +L+ G     +  KV  L   + E+    D     I+ D L K
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 942



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 161/340 (47%), Gaps = 22/340 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       ++ R++    TPD+ T++ L+  LC + R+ EA  +  ++ + G +  +F Y
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++ + R      A  ++ EM +   +      P+  TYT  I+  CKEG ++ A++L
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHK------PSATTYTVFINSYCKEGRLEDAEDL 726

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +L+M+ + + P+VVTY  +I G  +    + A      M+    +PN  T+ +++  L K
Sbjct: 727 ILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK 786

Query: 182 NG----------------KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
                             ++D   +LL+ M++HG+ P   TY++L+ GFC  GR+  A  
Sbjct: 787 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 846

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M   G       Y++LI   C  K  E ALS  S M   G +P +  +  L VGL 
Sbjct: 847 LLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLC 906

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
                E+   LF ++   G   D   ++   DGL K GY+
Sbjct: 907 NEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 946



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 162/361 (44%), Gaps = 24/361 (6%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           V +T+LI G         AA L  ++   GC PD +TY+ L++ LC+      AL + ++
Sbjct: 600 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQ 659

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M+      G+ C      YT +ID + +EG  D AK +  +M     KP+  TYT  I  
Sbjct: 660 MSLR----GIKC--TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           +C      +A+ L ++M  +GV P+VVT+N+++D     G +D A   L  M+     P+
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773

Query: 204 AFTYNTLLDGFCLTGRVNHAK-----------------ELFVSMESMGCKHTVFSYSILI 246
            +TY  LL    L G + + +                 +L   M   G   TV +YS LI
Sbjct: 774 YWTYCLLLKHL-LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 832

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G+CK   +E A  L   M  KG+ P+  I+  L     +    E+A      M   G  
Sbjct: 833 AGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQ 892

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
               +YR  + GLC  G   +   LF  L  L    D  A+  L DGL K+G ++I  ++
Sbjct: 893 PQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQM 952

Query: 367 F 367
            
Sbjct: 953 L 953



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 48/303 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+  H   +   +  S   P A T+T  I   C E R+ +A  L  K+   G  PDV TY
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGE--FGVVC------------------------ 95
             L++G     +   A +  + M   + E  +   C                        
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 802

Query: 96  -------------------EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
                               P   TY+++I G CK G +++A  LL  M  K + PN   
Sbjct: 803 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 862

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           YT +I+  C  K + +A      M + G QP + ++ +++  LC  G  ++   L   ++
Sbjct: 863 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G   D   +  L DG    G V+   ++   ME   C  +  +Y+++ N   K  E+ 
Sbjct: 923 ELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN---KMHEVS 979

Query: 257 GAL 259
            +L
Sbjct: 980 SSL 982



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 41/96 (42%)

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           + YN  +  L +    E    ++  L    L+P+ VTY+ MI   C +G +  A   F  
Sbjct: 149 KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRL 208

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           + E  + P   T + L+ G+ R  E  K   L   M
Sbjct: 209 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 214/401 (53%), Gaps = 8/401 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  + +   +PD VT +S+++ LC    +  A   F +     C PD   +
Sbjct: 119 GDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLF 176

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+GLC+ +    A  + EEM+    E G+V  P+ VTY ++IDGLCK   +++A++L
Sbjct: 177 NILVHGLCKANQLSEARQMIEEMS----ERGIV--PDVVTYNSLIDGLCKSYRMEEARQL 230

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  + ++PN+VTY ++I G+C       A +L   M+  G  P+VVTFN ++   C+
Sbjct: 231 LETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQ 290

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+D+A  +L LM +    P+  TYN L+ G C  GR N A EL   M+  G    + +
Sbjct: 291 KSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIIT 350

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI  +C+N +IE A  + + M+ +G+ PD + + TL V L +  + + AF L D M 
Sbjct: 351 YNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMF 410

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   + +T+ + ++GLC +  + EA  L   +R + C+     Y  L+ GLCK+GR++
Sbjct: 411 DAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVD 470

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
            A E+   +    + P V +   ++  L  +G+ D A   F
Sbjct: 471 DAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYF 511



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 129/407 (31%), Positives = 220/407 (54%), Gaps = 16/407 (3%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           +T+ +LI G C    +  A  L  +++  G  PDV T++++V  LC T +   A+  F E
Sbjct: 106 ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
                    V C P++V +  ++ GLCK   + +A++++ +M ++ I P+VVTY S+I G
Sbjct: 166 --------SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDG 217

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C +    EA++L   M+ + V+PN+VT+N ++   CK G    A +L++ MIQ G  PD
Sbjct: 218 LCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPD 277

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             T+N+L+ GFC   +++ A E+   M+   C   + +Y++LI+G C       A  L S
Sbjct: 278 VVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLS 337

Query: 264 EMLSKGIKPDVVIHNTLFVGLF-EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           EM  +GI PD++ +N+L +G+F    Q+E+AF++ + M   GV  D  +Y T    L K+
Sbjct: 338 EMDGRGILPDIITYNSL-IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKS 396

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA---LELFRSLPCGVLVPNV 379
               EA  L   +       ++  +NSL++GLC S RL+ A   L + R + C    P  
Sbjct: 397 ERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCD---PAA 453

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            TY +++ GLC  G++D A+++ + M    + P V +   ++    R
Sbjct: 454 STYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAR 500



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 206/403 (51%), Gaps = 7/403 (1%)

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           FT   L+  L +      A  +F +        G  C+ N +TY T+I G CK G +++A
Sbjct: 70  FTCNCLLRTLVKARRHHQAYQIFRDEL-----LGQHCDTNHITYNTLIGGFCKAGDMERA 124

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            +LL +MK++   P+VVT++S+++  C   + + A + F E ++    P+ V FN+++  
Sbjct: 125 FQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHG 182

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK  ++ EA ++++ M + G+ PD  TYN+L+DG C + R+  A++L  +M     +  
Sbjct: 183 LCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPN 242

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           + +Y+ LI GYCK      A  L   M+  G  PDVV  N+L  G  +  ++++A ++  
Sbjct: 243 LVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLH 302

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M++   A +  TY   I GLC  G   EA EL   +       DI  YNSLI   C++ 
Sbjct: 303 LMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNF 362

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           ++E A ++   +    ++P+ ++Y  +   L    + D+A  L  +M +   +PN+ TF+
Sbjct: 363 QIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFN 422

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            L+ G        +   LL  M+ +   P AS   ++V  L K
Sbjct: 423 SLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCK 465



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 221/439 (50%), Gaps = 11/439 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFT-KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           T   L++ L    R  +A  +F  +L    C+ +  TY TL+ G C+      A  L  E
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M            P+ VT+++I+  LC  G + +A +   +  +    P+ V +  ++ G
Sbjct: 131 MKERGHS------PDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHG 182

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C A   +EA+++  EM ++G+ P+VVT+N ++D LCK+ +M+EA +LL+ M++  VRP+
Sbjct: 183 LCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPN 242

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             TYNTL+ G+C TG    A +L   M   G    V +++ LI+G+C+  +I+ A  +  
Sbjct: 243 LVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVL- 301

Query: 264 EMLSKGI-KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            ++ KG+  P++V +N L  GL +  +   A +L  EM   G+  D  TY + I   C+N
Sbjct: 302 HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRN 361

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
             I +A ++ + +       D  +Y +L   L KS R + A  L  ++     +PN+ T+
Sbjct: 362 FQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTF 421

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++ GLC   ++D+AR L   M      P   T+++L+ G  +        E+L  M  
Sbjct: 422 NSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVS 481

Query: 443 INVMPDASIVSIVVDLLAK 461
             + P  S    +V  LA+
Sbjct: 482 EGIQPLVSSSGTIVHTLAR 500



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 182/329 (55%), Gaps = 4/329 (1%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFI-EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           N  T   ++R    A+  ++A ++F  E++ Q    N +T+N ++   CK G M+ A +L
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  M + G  PD  T+++++   C TG ++ A + F   ES+ C      ++IL++G CK
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF--RESVECAPDSVLFNILVHGLCK 185

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
             ++  A  +  EM  +GI PDVV +N+L  GL + +++E A +L + M +  V  +  T
Sbjct: 186 ANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVT 245

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I G CK G    A +L   +       D+  +NSLI G C+  +++ A E+   + 
Sbjct: 246 YNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMK 305

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
            G+  PN+VTY+++I GLC+ G+ ++A +L  +M+   ++P++IT++ LI  F R  +  
Sbjct: 306 KGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIE 365

Query: 432 KVIELLHKMKEINVMPDA-SIVSIVVDLL 459
           +  ++ + M E  V+PD  S  ++ V LL
Sbjct: 366 QAFQIQNLMVERGVIPDGISYCTLAVALL 394



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 161/324 (49%), Gaps = 45/324 (13%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ SLI GLC   R+ EA  L   +      P++ TY TL+ G C+T  T +A  L
Sbjct: 206 PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQL 265

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E M            P+ VT+ ++I G C++  +DKA E+L  MK     PN+VTY  +
Sbjct: 266 IERMIQSGTH------PDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVL 319

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C A   NEA  L  EM  +G+ P+++T+N ++   C+N ++++A ++ +LM++ GV
Sbjct: 320 ISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGV 379

Query: 201 RPDA-----------------------------------FTYNTLLDGFCLTGRVNHAKE 225
            PD                                    FT+N+L++G C + R++ A+ 
Sbjct: 380 IPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARH 439

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M  +GC     +Y +L+ G CK   ++ A  +   M+S+GI+P V    T+   L 
Sbjct: 440 LLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLA 499

Query: 286 EIHQVERAFKLFDEMQRNGVAADT 309
              + + A   FD++    VAA++
Sbjct: 500 REGKQDLALHYFDQV----VAAES 519



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 153/297 (51%), Gaps = 5/297 (1%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLL--DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           N  T N ++  L K  +  +A ++   +L+ QH    +  TYNTL+ GFC  G +  A +
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQH-CDTNHITYNTLIGGFCKAGDMERAFQ 126

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M+  G    V ++S ++   C    +  A+  + E  S    PD V+ N L  GL 
Sbjct: 127 LLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLC 184

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           + +Q+  A ++ +EM   G+  D  TY + IDGLCK+  + EA +L  T+   K   ++ 
Sbjct: 185 KANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLV 244

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YN+LI G CK+G   +A +L   +      P+VVT++ +I G C   ++DKA ++   M
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM 304

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++    PN++T+++LI G       ++  ELL +M    ++PD    + ++ +  +N
Sbjct: 305 KKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRN 361


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 221/434 (50%), Gaps = 9/434 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T+  LI  LC   ++ +A ++   +   GC PDV TY  L+   C+      A+ L
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            + M A G       C PN VTY  ++DG+C EG VD A ELL  +     KP+ V Y +
Sbjct: 65  IDLMRAEG-------CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 117

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V++G C A+ W +A  L  EM+ +   PN  TFNV++  LC+ G + +A +LL+ M +HG
Sbjct: 118 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 177

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
              +  TYN +++G C    V+ A  L   M+S GCK  + +Y+ L+ G C       A 
Sbjct: 178 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE 237

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L   M   G  PD V  NTL   L +   +  A ++F +M   G   ++ TY T I GL
Sbjct: 238 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 297

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K   + +A+ELF+ +       D + Y  L + L     +E A++  R L    + P+ 
Sbjct: 298 AKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHT 356

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           V Y+ ++ GLC +G+ + A D+   M  +  +P+ +T+ +LI G       ++  ELL K
Sbjct: 357 VLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIK 416

Query: 440 MKEINVMPDASIVS 453
           +   +V+ ++ I S
Sbjct: 417 LCSRDVLVNSLIKS 430



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 209/406 (51%), Gaps = 7/406 (1%)

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           +P+ +TY  L++ LC       AL++ ++M          C P+ VTY  +++  CK   
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDM------LCRGCAPDVVTYNILLEATCKGRG 57

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
             +A EL+  M+ +   PN VTY  ++ G C   D ++A  L   +   G +P+ V +N 
Sbjct: 58  YRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 117

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  LC   +  +A  L+  M++    P+  T+N ++   C  G +  A +L   M   G
Sbjct: 118 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 177

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C   + +Y+ +ING C+ + ++GA+ L S+M S G KPD+V +NTL  GL    +   A 
Sbjct: 178 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE 237

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +L D M +NG   D  T+ T I  LC+ G +V+A+E+F  +    C  +   Y+++I GL
Sbjct: 238 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 297

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            K+ +L+ ALELF  +      P+ + Y ++   L +D  +++A      ++++ + P+ 
Sbjct: 298 AKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHT 356

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           + ++ ++ G  R  +    I+++  M     MPD     I+++ LA
Sbjct: 357 VLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLA 402



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 167/319 (52%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           ++PN  TY  +I   C      +A  +  +M+ +G  P+VVT+N++++  CK     +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L+DLM   G  P+  TYN L+DG C  G V+ A EL  ++ S GCK +  +Y+ ++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C  +    A  L +EML +   P+    N +   L     +++A +L ++M ++G  A+ 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I+GLC+   +  A+ L   ++   C+ DI  YN+L+ GLC + R   A EL  +
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +     +P+ VT++ +IG LC  G M  A ++F  M +    PN IT+  +I G  +  +
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 430 PSKVIELLHKMKEINVMPD 448
             + +EL ++M      PD
Sbjct: 303 LDQALELFNEMGHKGFNPD 321



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 145/277 (52%), Gaps = 11/277 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L ++ K   T + VT+ ++I GLC +  +  A  L +K++ +GC+PD+ TY
Sbjct: 161 GLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTY 220

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GLC  +  + A  L + M   NG     C P+ VT+ T+I  LC++G +  A E+
Sbjct: 221 NTLLKGLCSAARWVDAEELMDNMTQ-NG-----CLPDNVTFNTLIGFLCQKGLMVDAIEV 274

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM DK   PN +TY+++I G   A   ++A  LF EM  +G  P+ + + ++ + L  
Sbjct: 275 FKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLND 333

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +  ++EA + +  +   G+ P    YN +L G C  G+   A ++   M S GC     +
Sbjct: 334 DDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLT 393

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           Y ILI G       EG L+   E+L K    DV++++
Sbjct: 394 YVILIEGL----AYEGYLNEARELLIKLCSRDVLVNS 426



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 105/216 (48%)

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           M  +   ++Y+ LI+  C+  ++  ALS+  +ML +G  PDVV +N L     +     +
Sbjct: 1   MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A +L D M+  G   +  TY   +DG+C  G + +A+EL   L    C+     YN+++ 
Sbjct: 61  AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GLC + R   A EL   +      PN  T++++I  LC  G + +A  L   M ++    
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           N++T++ +I G          + LL KMK     PD
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 216



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 75/152 (49%)

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           V  + +TY   I  LC+ G + +A+ +   +    C  D+  YN L++  CK      A+
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           EL   +      PN VTY++++ G+C +G +D A +L  ++  +   P+ + ++ +++G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
                     EL+ +M   N  P+ +  ++V+
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVI 154


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 226/466 (48%), Gaps = 48/466 (10%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           LK   + DAV+  +L+ G C + R+ +A  +    +V G   +V TYT L+NG CR+   
Sbjct: 136 LKESGSADAVSHNTLVAGYCRDGRLADAERVLEAAKVSGAA-NVVTYTALINGYCRSGRL 194

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             ALNL   M            P+T TY T++ GLC     +KA+EL+ +M   N  PN 
Sbjct: 195 ADALNLIASMPVA---------PDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNE 245

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           VT+ + IR FC     + A +L   M   G  P+VV ++ +++   + G++D+A  LL+ 
Sbjct: 246 VTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNT 305

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+    +P+   YN  L G C+  R     EL   M    C     ++S+L +  C++  
Sbjct: 306 ML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGL 362

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG---------- 304
           ++ A+ +  +M   G +PDVVI+NTL     E  +V+ A  L D M  N           
Sbjct: 363 VDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCNPDTISFNAALK 422

Query: 305 --VAADTW--------------------TYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
                + W                    T+   ID LC++G +  A+E+F  +   +C  
Sbjct: 423 ALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTP 482

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           DI  Y+SLI+G  + G +E A+ELF+S+PC    P++ +Y+ ++ GLC   + + A +L 
Sbjct: 483 DIVTYSSLINGFSEQGLVESAIELFQSMPCK---PDIFSYNAVLKGLCRAARWEDAGELI 539

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +M      PN ITF++LI    +     + IE+  +M E    PD
Sbjct: 540 ANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPD 585



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 235/492 (47%), Gaps = 64/492 (13%)

Query: 4   VSHGFVVLG-----------RILKSCFTPDA---VTFTSLIKGLCAESRIMEAAALFTKL 49
           VSH  +V G           R+L++     A   VT+T+LI G C   R+ +A  L   +
Sbjct: 145 VSHNTLVAGYCRDGRLADAERVLEAAKVSGAANVVTYTALINGYCRSGRLADALNLIASM 204

Query: 50  RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL 109
            V    PD +TY T++ GLC       A  L EEM   N      C PN VT+ T I   
Sbjct: 205 PV---APDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNN------CHPNEVTFATQIRSF 255

Query: 110 CKEGFVDKAKELLLQMKDKNI--------------------------------KPNVVTY 137
           C+ G +D A +LL +M                                     KPN V Y
Sbjct: 256 CQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCKPNTVCY 315

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            + ++G C A+ W +   L  EM+ +   PN  TF+++   LC++G +D A  +++ M +
Sbjct: 316 NAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQK 375

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +G RPD   YNTL++ F   GRV+ A  L   ++SM C     S++  +   C+ +    
Sbjct: 376 YGCRPDVVIYNTLINYFSEQGRVDDALML---LDSMLCNPDTISFNAALKALCRTERWYD 432

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
              L ++ML +      +  N L   L +   V  A ++F++M +     D  TY + I+
Sbjct: 433 VEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLIN 492

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G  + G +  A+ELF ++    C+ DI +YN+++ GLC++ R E A EL  ++      P
Sbjct: 493 GFSEQGLVESAIELFQSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPP 549

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           N +T++I+I  LC  G  D+A ++F  M E    P++ T++ LI GF   +E  ++ + L
Sbjct: 550 NEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGF---SEQGRLDDAL 606

Query: 438 HKMKEINVMPDA 449
           + +  ++  PDA
Sbjct: 607 NLLSTMSCKPDA 618



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 202/424 (47%), Gaps = 18/424 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + H   +L R+ +   TPD V +++L+ G   + R+ +A  L   L    C+P+   Y
Sbjct: 259 GLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVL---LNTMLCKPNTVCY 315

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              + GLC          L  EM   +      C PN  T++ +   LC+ G VD A E+
Sbjct: 316 NAALKGLCMAERWKDVGELIAEMVRKD------CPPNEATFSMLTSCLCQHGLVDCAMEV 369

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + QM+    +P+VV Y ++I  F      ++A  L   M+     P+ ++FN  +  LC+
Sbjct: 370 VEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCR 426

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +  +   L+  M++        T+N L+D  C  G VNHA E+F  M    C   + +
Sbjct: 427 TERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVT 486

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LING+ +   +E A+ L+  M     KPD+  +N +  GL    + E A +L   M 
Sbjct: 487 YSSLINGFSEQGLVESAIELFQSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMA 543

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R     +  T+   I+ LC+ G+   A+E+F  +       DI  YN+LI+G  + GRL+
Sbjct: 544 RKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLD 603

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL L  ++ C    P+ ++Y+  + GLC   +  +A ++  +M      PN +TF    
Sbjct: 604 DALNLLSTMSCK---PDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFKYAN 660

Query: 422 RGFI 425
           + FI
Sbjct: 661 QLFI 664



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 166/324 (51%), Gaps = 9/324 (2%)

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
             +R     +D + A RL +  M     P V+  N+++ +LC + ++ +A R+LD + + 
Sbjct: 81  QTLRRLVQLEDLDAALRL-VGSMPSSEPPAVIACNILIKKLCAHRRLADAERVLDALKES 139

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G   DA ++NTL+ G+C  GR+  A+ +  + +  G  + V +Y+ LINGYC++  +  A
Sbjct: 140 G-SADAVSHNTLVAGYCRDGRLADAERVLEAAKVSGAANVV-TYTALINGYCRSGRLADA 197

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+L + M    + PD   +NT+  GL    Q E+A +L +EM RN    +  T+ T I  
Sbjct: 198 LNLIASM---PVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRS 254

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+NG +  AV+L   +    C  D+  Y++L++G  + GR++ AL L  ++ C    PN
Sbjct: 255 FCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCK---PN 311

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+  + GLC   +     +L  +M      PN  TF ML     +       +E++ 
Sbjct: 312 TVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVE 371

Query: 439 KMKEINVMPDASIVSIVVDLLAKN 462
           +M++    PD  I + +++  ++ 
Sbjct: 372 QMQKYGCRPDVVIYNTLINYFSEQ 395


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 216/431 (50%), Gaps = 12/431 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR------VFGCEPDVFTYTT 63
           +L  + K    P  VTF  L+  LC   RI EA  +F +LR        G EPDV  + T
Sbjct: 303 LLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNT 362

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++GLC+       L+L EEM  GN     +  PNTVTY  +IDG  K G  D+A EL  
Sbjct: 363 LIDGLCKVGKEEDGLSLLEEMKMGN-----INRPNTVTYNCLIDGFFKAGNFDRAHELFR 417

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           QM ++ ++PNV+T  +++ G C     + A   F EM  +G++ N  T+  ++   C   
Sbjct: 418 QMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVN 477

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            ++ A +  + M+  G  PDA  Y +L+ G C+ GR+N A  +   ++  G       Y+
Sbjct: 478 NINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYN 537

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +LI+G+CK K++E    L +EM   G+KPD + +NTL   L +      A K+ ++M + 
Sbjct: 538 VLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKE 597

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEI 362
           G+     TY   I   C    + E +++F  +    K   +   YN LID LC++  ++ 
Sbjct: 598 GLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDR 657

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+ L   +    + PN  TY+ ++ G+ +   + KA +L   M E A  P+ IT ++L  
Sbjct: 658 AISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTE 717

Query: 423 GFIRINEPSKV 433
               + E  K+
Sbjct: 718 WLSAVGEIEKL 728



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 216/441 (48%), Gaps = 2/441 (0%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           DA +  +L+  L     I     L  ++      P V T+  LVN LC+      AL +F
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVF 339

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI-KPNVVTYTSV 140
           + +    G   V  EP+ V + T+IDGLCK G  +    LL +MK  NI +PN VTY  +
Sbjct: 340 DRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCL 399

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GF  A +++ A  LF +M ++GVQPNV+T N ++D LCK+G++  A    + M   G+
Sbjct: 400 IDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGL 459

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + +A TY  L+  FC    +N A + F  M S GC      Y  LI+G C    +  A  
Sbjct: 460 KGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASV 519

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + S++   G   D   +N L  G  +  ++ER ++L  EM+  GV  DT TY T I  L 
Sbjct: 520 VVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLG 579

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL-PCGVLVPNV 379
           K G    A ++   +        +  Y ++I   C    ++  +++F  +     + PN 
Sbjct: 580 KTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNT 639

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           V Y+I+I  LC +  +D+A  L  DM+   V PN  T++ +++G        K  EL+ +
Sbjct: 640 VIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDR 699

Query: 440 MKEINVMPDASIVSIVVDLLA 460
           M E    PD   + ++ + L+
Sbjct: 700 MVEEACRPDYITMEVLTEWLS 720



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 207/430 (48%), Gaps = 14/430 (3%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           E   L  KL   G  PD F  T LV  LC      VA  +   +    G        +  
Sbjct: 229 EVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAV------DAA 282

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           +   ++  L +   + +  ELL +M+ + I+P+VVT+  ++   C A+  +EA ++F  +
Sbjct: 283 SCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRL 342

Query: 161 MDQG------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV-RPDAFTYNTLLDG 213
             +G      V+P+VV FN ++D LCK GK ++   LL+ M    + RP+  TYN L+DG
Sbjct: 343 RGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDG 402

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           F   G  + A ELF  M   G +  V + + L++G CK+  +  A+  ++EM  KG+K +
Sbjct: 403 FFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGN 462

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +  L      ++ + RA + F+EM  +G + D   Y + I GLC  G + +A  +  
Sbjct: 463 AATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVS 522

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            L++     D   YN LI G CK  +LE   EL   +    + P+ +TY+ +I  L   G
Sbjct: 523 KLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM-KEINVMPDASIV 452
               A  +   M +  + P+V+T+  +I  +       + +++  +M     V P+  I 
Sbjct: 583 DFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIY 642

Query: 453 SIVVDLLAKN 462
           +I++D L +N
Sbjct: 643 NILIDALCRN 652



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 174/398 (43%), Gaps = 46/398 (11%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNV---VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           L K G    A  +L +M   N   +V   + +  ++R      D  E   L  ++ ++GV
Sbjct: 184 LLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPD-GEVVGLVAKLGERGV 242

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            P+      ++ +LC + K   A  +L  +++ G   DA + N LL        +    E
Sbjct: 243 FPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNE 302

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG------IKPDVVIHNT 279
           L   ME    + +V ++ IL+N  CK + I+ AL ++  +  KG      ++PDVV+ NT
Sbjct: 303 LLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNT 362

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGV-AADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           L  GL ++ + E    L +EM+   +   +T TY   IDG  K G    A ELF  +   
Sbjct: 363 LIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEE 422

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             + ++   N+L+DGLCK GR+  A+E F  +    L  N  TY+ +I   C    +++A
Sbjct: 423 GVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRA 482

Query: 399 RDLFLDMEENAVVPNVIT-----------------------------------FDMLIRG 423
              F +M  +   P+ +                                    +++LI G
Sbjct: 483 MQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISG 542

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F +  +  +V ELL +M+E  V PD    + ++  L K
Sbjct: 543 FCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGK 580



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 136/311 (43%), Gaps = 7/311 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV         +       +A T+T+LI   C  + I  A   F ++   GC PD   Y
Sbjct: 442 GRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVY 501

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++GLC       A  +  ++          C      Y  +I G CK+  +++  EL
Sbjct: 502 YSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSC------YNVLISGFCKKKKLERVYEL 555

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M++  +KP+ +TY ++I       D+  A ++  +M+ +G++P+VVT+  I+   C 
Sbjct: 556 LTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCS 615

Query: 182 NGKMDEASRLLDLMIQHG-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
              +DE  ++   M     V P+   YN L+D  C    V+ A  L   M+    +    
Sbjct: 616 KKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTT 675

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++ G    K +  A  L   M+ +  +PD +    L   L  + ++E+     +  
Sbjct: 676 TYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGY 735

Query: 301 QRNGVAADTWT 311
           Q +   A + T
Sbjct: 736 QDSSYPASSQT 746


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 225/443 (50%), Gaps = 45/443 (10%)

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
           C PDV +Y T+++GL +      A   + EM +          P+ VTY +II  L K  
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRR------VSPDAVTYNSIIAALSKAQ 60

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            +D+A E+L  M    + PN  TY S++ G+C +    +A  +F +M   G++P+VVT+N
Sbjct: 61  AMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG--------------- 218
            +MD LCKNGK  EA ++ D M++ G++PD  TY TLL G+   G               
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 219 --------------------RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
                               +V+    +F  M   G      +Y  +I+G CK   ++ A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           +  + +M+ KG+ P+VV++ +L   L    + E+A +L  E+   G+  +   + T +D 
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G ++E+ +LF  L  +    D+  Y++LIDG C +G+++ A++L   +    L P+
Sbjct: 297 LCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPD 356

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VTYS +I G C   +M+ A  LF +ME N V P++IT+++++ G  R    +   EL  
Sbjct: 357 SVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYA 416

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
           ++ E     + S  +I++   AK
Sbjct: 417 RITESGTQLELSTYNIILMDFAK 439



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/362 (34%), Positives = 186/362 (51%), Gaps = 29/362 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +  ++      PD VT+ SL+  LC   +  EA  +F  +   G +PD+ TY
Sbjct: 91  GQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTY 150

Query: 62  TTLVNGLCRTS-----HTIVALNLFEEMANGNGEFGV-VCE------------------- 96
            TL++G          H ++AL +   M   +  F + +C                    
Sbjct: 151 GTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQ 210

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN V Y T+IDGLCK G +D A     QM DK + PNVV YTS+I   C    W +
Sbjct: 211 QGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEK 270

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+ L  E++DQG+ PN+V FN I+D LCK G++ E+ +L DL+   GV PD  TY+TL+D
Sbjct: 271 AEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLID 330

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+CL G+++ A +L   M S+G K    +YS LINGYCK   +E AL+L+ EM S G+ P
Sbjct: 331 GYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNP 390

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D++ +N +  GLF   +   A +L+  +  +G   +  TY   +    K   ++     F
Sbjct: 391 DIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCF 450

Query: 333 HT 334
            T
Sbjct: 451 RT 452



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 221/428 (51%), Gaps = 10/428 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   ++    +L    +PDAVT+ S+I  L     +  A  + T + +    P+ FTY
Sbjct: 25  GDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMVM----PNCFTY 80

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++G C +  +  A+ +F +M +         EP+ VTY +++D LCK G   +A+++
Sbjct: 81  NSIMHGYCSSGQSEKAIGIFRKMCSDG------IEPDVVTYNSLMDYLCKNGKCTEARKI 134

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  + +KP++ TY +++ G+       E   L   M+  G+Q +   FN+++    K
Sbjct: 135 FDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTK 194

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+DE   +   M Q G+ P+A  Y T++DG C  GR++ A   F  M   G    V  
Sbjct: 195 QEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVV 254

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+  C   + E A  L  E+L +GI P++V  NT+   L +  +V  + KLFD + 
Sbjct: 255 YTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLG 314

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  D  TY T IDG C  G +  A++L   +  +  + D   Y++LI+G CK  R+E
Sbjct: 315 HIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRME 374

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL LF+ +    + P+++TY+I++ GL    +   A++L+  + E+     + T+++++
Sbjct: 375 DALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434

Query: 422 RGFIRINE 429
             F + N 
Sbjct: 435 MDFAKTNS 442



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 188/400 (47%), Gaps = 74/400 (18%)

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           D    P+VV+Y ++I G     D ++A   + EM+D+ V P+ VT+N I+  L K   MD
Sbjct: 4   DGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMD 63

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  +L +M    V P+ FTYN+++ G+C +G+   A  +F  M S G +  V +Y+ L+
Sbjct: 64  RAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLM 119

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG------LFEIH------------ 288
           +  CKN +   A  ++  M+ +G+KPD+  + TL  G      L E+H            
Sbjct: 120 DYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQ 179

Query: 289 -----------------QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA--- 328
                            +V+    +F +M++ G+  +   YRT IDGLCK G + +A   
Sbjct: 180 LDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLN 239

Query: 329 ------------VELFHTLRILKCEFD--------------------IRAYNSLIDGLCK 356
                       V ++ +L    C +D                    I  +N+++D LCK
Sbjct: 240 FEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCK 299

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            GR+  + +LF  L    + P+V+TYS +I G C  G+MD A  L   M    + P+ +T
Sbjct: 300 EGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVT 359

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +  LI G+ +IN     + L  +M+   V PD    +I++
Sbjct: 360 YSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIIL 399



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 6/217 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+    +   +++    TP+ V +TSLI  LC   +  +A  L  ++   G  P++  
Sbjct: 230 LGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVF 289

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T+++ LC+    I +  LF+ +    G  GV   P+ +TY+T+IDG C  G +D A +
Sbjct: 290 FNTILDSLCKEGRVIESKKLFDLL----GHIGV--NPDVITYSTLIDGYCLAGKMDGAMK 343

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M    +KP+ VTY+++I G+C      +A  LF EM   GV P+++T+N+I+  L 
Sbjct: 344 LLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLF 403

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
           +  +   A  L   + + G + +  TYN +L  F  T
Sbjct: 404 RTRRTAAAKELYARITESGTQLELSTYNIILMDFAKT 440



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 4/207 (1%)

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PDVV +NT+  GLF+   V++A+  + EM    V+ D  TY + I  L K   +  A+E+
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
              + +  C      YNS++ G C SG+ E A+ +FR +    + P+VVTY+ ++  LC 
Sbjct: 69  LTVMVMPNC----FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +G+  +AR +F  M +  + P++ T+  L+ G+       ++ +LL  M +  +  D  +
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 452 VSIVVDLLAKNEISLNSLPSFTVHEQQ 478
            +I++    K E     +  F+   QQ
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQ 211


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/436 (31%), Positives = 220/436 (50%), Gaps = 10/436 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+  LI   C   ++ EA     +++  G E D+  YT+L+ G C          LF+E
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE 272

Query: 84  -MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
            +  G+        P  +TY T+I G CK G + +A E+   M ++ ++PNV TYT +I 
Sbjct: 273 VLERGDS-------PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G C      EA +    M+++  +PN VT+N+I+++LCK+G + +A  +++LM +   RP
Sbjct: 326 GLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           D  TYN LL G C  G ++ A +L   M  +S      V SY+ LI+G CK   +  AL 
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +Y  ++ K    D V  N L     +   V +A +L+ ++  + +  ++ TY   IDG C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G +  A  L   +R+ + +  +  YN L+  LCK G L+ A  LF  +      P+VV
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +++IMI G    G +  A  L + M    + P++ T+  LI  F+++    + I    KM
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625

Query: 441 KEINVMPDASIVSIVV 456
            +    PDA I   V+
Sbjct: 626 VDSGFEPDAHICDSVL 641



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 239/498 (47%), Gaps = 43/498 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M +    F VL  +LK  F  +      L+KGLC      +A +L  ++R     PDVF+
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++ G C       AL L  EM  G+G     C  + VT+  +ID  CK G +D+A  
Sbjct: 180 YNTVIRGFCEGKELEKALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMG 233

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +MK   ++ ++V YTS+IRGFC   + +  K LF E++++G  P  +T+N ++   C
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ EAS + + MI+ GVRP+ +TY  L+DG C  G+   A +    M     +    
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAV 353

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+I+IN  CK+  +  A+ +   M  +  +PD + +N L  GL     ++ A KL   M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 301 QRNG--VAADTWTYRTFIDGLCKN-----------------------------------G 323
            ++      D  +Y   I GLCK                                    G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + +A+EL+  +   K   +   Y ++IDG CK+G L +A  L   +    L P+V  Y+
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            ++  LC +G +D+A  LF +M+ +   P+V++F+++I G ++  +      LL  M   
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593

Query: 444 NVMPDASIVSIVVDLLAK 461
            + PD    S +++   K
Sbjct: 594 GLSPDLFTYSKLINRFLK 611



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 205/442 (46%), Gaps = 50/442 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G  +   +L+   +P A+T+ +LI+G C   ++ EA+ +F  +   G  P+V+TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 62  TTLVNGLC---RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           T L++GLC   +T   +  LNL  E            EPN VTY  II+ LCK+G V  A
Sbjct: 321 TGLIDGLCGVGKTKEALQPLNLMIEKDE---------EPNAVTYNIIINKLCKDGLVADA 371

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIM 176
            E++  MK +  +P+ +TY  ++ G C   D +EA +L   M+       P+V+++N ++
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431

Query: 177 DELCKNGKMDEASRLLDLMIQH---GVR-------------------------------- 201
             LCK  ++ +A  + DL+++    G R                                
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            ++ TY  ++DGFC TG +N AK L   M     + +VF Y+ L++  CK   ++ A  L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EM      PDVV  N +  G  +   ++ A  L   M R G++ D +TY   I+   K
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            GY+ EA+  F  +     E D    +S++      G  +   EL + L    +V +   
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671

Query: 382 YSIMIGGLCN-DGQMDKARDLF 402
              ++  +CN    MD A+ L 
Sbjct: 672 TCTVMDYMCNSSANMDLAKRLL 693



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 116/219 (52%)

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S S L+  Y + ++   A  + + ML +G   +V  HN L  GL    +  +A  L  EM
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +RN +  D ++Y T I G C+   + +A+EL + ++   C + +  +  LID  CK+G++
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A+   + +    L  ++V Y+ +I G C+ G++D+ + LF ++ E    P  IT++ L
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           IRGF ++ +  +  E+   M E  V P+    + ++D L
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 228/461 (49%), Gaps = 10/461 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      +L  + +    PDAV + ++I  LC +  + EAA L  ++ + GC  DV T
Sbjct: 188 LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNT 247

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  +V G+C       A  L + M          C P  +TY  ++ GLC+    D+A+ 
Sbjct: 248 FDDVVRGMCGLGRVREAARLVDRMMTKG------CMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L ++ + N    VV + +VI G        EA  L+  M  +G QP+  T++++M  LC
Sbjct: 302 MLGRVPELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++  A RLL  M + G  P+  TY  +L  FC  G  +  + L   M + G      
Sbjct: 358 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ +I   CK+  ++ A+ L  EM S+G  PD+  +NT+   L    Q+E A  +F+ +
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV A+  TY T I  L ++G   +AV L   + +  C  D+ +YN LI  +CK G +
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 537

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + +L L   +    + PN V+Y+I+I  LC + ++  A +L   M    + P+++T++ L
Sbjct: 538 DRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL 597

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I G  ++      + LL K+   NV PD    +I++    K
Sbjct: 598 INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 226/457 (49%), Gaps = 11/457 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    +L  +L      D  TF  +++G+C   R+ EAA L  ++   GC P V TY
Sbjct: 224 GGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY 283

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLCR      A  +           G V E N V + T+I G   EG + +A EL
Sbjct: 284 GFLLQGLCRVRQADEARAML----------GRVPELNVVLFNTVIGGCLAEGKLAEATEL 333

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  K  +P+  TY+ ++ G C       A RL  EM  +G  PNVVT+ +++   CK
Sbjct: 334 YETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 393

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG  D+   LL+ M   G+  ++  YN ++   C  GR++ A  L   M S GC   + S
Sbjct: 394 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 453

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I   C N+++E A  ++  +L +G+  + + +NT+   L    + + A +L  EM 
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 513

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G + D  +Y   I  +CK+G +  ++ L   +     + +  +YN LI  LCK  R+ 
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 573

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALEL + +    L P++VTY+ +I GLC  G M  A +L   +    V P++IT+++LI
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633

Query: 422 RGFIRINEPSKVIELLHK-MKEINVMPDASIVSIVVD 457
               ++        LL++ M  +  + D  I+ I+ D
Sbjct: 634 SWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPD 670



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 212/441 (48%), Gaps = 10/441 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   TF    + LC   R  EA AL   +   GC PD   Y T+++ LC       A  L
Sbjct: 173 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 232

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM        + C  +  T+  ++ G+C  G V +A  L+ +M  K   P V+TY  +
Sbjct: 233 LNEM------LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFL 286

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G C  +  +EA+     M+ +  + NVV FN ++      GK+ EA+ L + M   G 
Sbjct: 287 LQGLCRVRQADEAR----AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGC 342

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PDA TY+ L+ G C  GR+  A  L   ME  G    V +Y+I+++ +CKN   +   +
Sbjct: 343 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 402

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM +KG+  +   +N +   L +  +++ A  L  EM+  G   D  +Y T I  LC
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            N  + EA  +F  L       +   YN++I  L + GR + A+ L + +       +VV
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y+ +I  +C DG +D++  L  +M E  + PN +++++LI    +       +EL  +M
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582

Query: 441 KEINVMPDASIVSIVVDLLAK 461
               + PD    + +++ L K
Sbjct: 583 LNQGLAPDIVTYNTLINGLCK 603



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 160/349 (45%), Gaps = 6/349 (1%)

Query: 117 KAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNV 174
           +A  LL Q+  +  ++P+  +Y  V+     A    +A  L+  M+ +  V P   TF V
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
               LC+ G+ DEA  LL  M +HG  PDA  Y T++   C  G V  A  L   M  MG
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C   V ++  ++ G C    +  A  L   M++KG  P V+ +  L  GL  + Q + A 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            +   +    V      + T I G    G + EA EL+ T+ +  C+ D   Y+ L+ GL
Sbjct: 301 AMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK GR+  A+ L R +      PNVVTY+I++   C +G  D  R L  +M    +  N 
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             ++ +I    +     + + L+ +M+     PD    + ++  L  NE
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 465


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 239/485 (49%), Gaps = 25/485 (5%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +++S + PDA TF SLI G C  +++  A  LF K+ + G   DV +Y  L+ G C 
Sbjct: 34  LSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCE 93

Query: 71  TSHTIVALNLFEEMAN----------------GNGEFGVV---------CEPNTVTYTTI 105
           T     A+ LF EM                  G GE G++           P+T  Y  +
Sbjct: 94  TGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAV 153

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           +D  C E    +A+E+L +M +K + P VVT T+VI  +C     ++A R+   M  +G 
Sbjct: 154 VDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 213

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +PNV T+N ++   C  GK+ +A  LL+ M   GV PDA TYN L+ G C+ G +  A  
Sbjct: 214 KPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFR 273

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   ME  G     ++Y+ LIN  CK+   + A SL+  + ++GIKP+ V  N+L  GL 
Sbjct: 274 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLC 333

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +  +V+ A+K  ++M   G   DT+TY +FI+ LCK     E +     +     +    
Sbjct: 334 KSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTV 393

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y  +I  L K     +    +  +      P+VVTY+  +   C +G++++A ++ ++M
Sbjct: 394 NYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 453

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
            +N V  + + ++ L+ G   I +    + +L +M  +  +P+     I++  L +  + 
Sbjct: 454 SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLV 513

Query: 466 LNSLP 470
            + LP
Sbjct: 514 EDVLP 518



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 224/484 (46%), Gaps = 23/484 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G ++L R+ +  + P    + +++   C E +  EA  +  ++   G  P V T 
Sbjct: 126 GRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTC 185

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++N  C+      AL + E M          C+PN  TY  ++ G C EG V KA  L
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLRG------CKPNVWTYNALVQGFCNEGKVHKAMAL 239

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   + P+ VTY  +IRG C       A RL   M   G+  +  T+N +++ LCK
Sbjct: 240 LNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 299

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+ D+A  L D +   G++P+A T+N+L++G C +G+V+ A +    M S GC    ++
Sbjct: 300 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYT 359

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS  I   CK K  +  LS   EML K +KP  V +  +   L +        + + EM 
Sbjct: 360 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 419

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   D  TY T +   C  G + EA  +   +       D  AYN+L+DG    G+ +
Sbjct: 420 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 479

Query: 362 IALELFRSLPCGVLVPNVVTYSIMI-----------------GGLCNDGQMDKARDLFLD 404
            A+ + + +     VPN  TY I++                  G+    ++     LF  
Sbjct: 480 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 539

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M++N  +PN  T+  ++ GF       +   L+  MKE ++  +  I + +V    K++ 
Sbjct: 540 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKR 599

Query: 465 SLNS 468
            L++
Sbjct: 600 YLDA 603



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 220/462 (47%), Gaps = 24/462 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  +       D  T+ +LI  LC + R  +A +LF  L   G +P+  T+
Sbjct: 266 GHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 325

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC++    +A    E+M +        C P+T TY++ I+ LCK     +    
Sbjct: 326 NSLINGLCKSGKVDIAWKFLEKMVSAG------CTPDTYTYSSFIEHLCKMKGSQEGLSF 379

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M  K++KP+ V YT VI      +++    R + EM+  G  P+VVT+   M   C 
Sbjct: 380 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 439

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++EA  +L  M ++GV  D   YNTL+DG    G+ +HA  +   M S+      F+
Sbjct: 440 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 499

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y IL+    + + +E  L L                     G+++  ++   F LFD M+
Sbjct: 500 YFILLRHLVRMRLVEDVLPLTP------------------AGVWKAIELTDVFGLFDVMK 541

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +N    ++ TY + ++G  ++G   EA  L   ++      +   Y +L+   CKS R  
Sbjct: 542 KNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYL 601

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L  S+     +P++++Y  ++ GL  +GQ DKA+++F++       P+ I + ++I
Sbjct: 602 DAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVII 661

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            G I+        E++  ++ +N  P     +++ + L   E
Sbjct: 662 DGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDRE 703



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 182/386 (47%), Gaps = 5/386 (1%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  +I  LC+   +  A   L  M     +P+  T+ S+I G+C     + A+ LF +M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
             +G   +VV++  +++  C+ G++DEA  L   M Q    PD   Y  L+ G C  GR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
                +   M+ +G + +  +Y+ +++  C  ++ + A  +  EM  KG+ P VV    +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
                +  ++  A ++ + M+  G   + WTY   + G C  G + +A+ L + +R+   
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             D   YN LI G C  G +E A  L R +    L+ +  TY+ +I  LC DG+ D+A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           LF  +E   + PN +TF+ LI G  +  +     + L KM      PD    S  ++ L 
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 461 KNEISLNSLPSFTVHEQQEEVDESNV 486
           K + S   L SF     Q++V  S V
Sbjct: 369 KMKGSQEGL-SFIGEMLQKDVKPSTV 393


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 226/466 (48%), Gaps = 48/466 (10%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           LK+    DAV+  +L+ G C +  + +A  +    R  G   +V TYT L++G CR+   
Sbjct: 145 LKTSGAADAVSHNTLVAGYCRDGSLWDAERVLEAARASG-AANVVTYTALIDGYCRSGRL 203

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             AL L   M            P+T TY T++ GLC     ++A+EL+ +M   N  PN 
Sbjct: 204 TDALRLIASMPVA---------PDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNE 254

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           VT+ + IR FC     + A  L  +M   G  P+VV ++ +++   ++G++D+A +LL  
Sbjct: 255 VTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLST 314

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+    RP+   YN  L G C+ GR +   EL   M    C     ++S LIN  C+N+ 
Sbjct: 315 ML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRL 371

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-------QRNGV-- 305
            E A+ +  +M   G  PDVV +NT+     E    + A KL + M         N V  
Sbjct: 372 AEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTISFNAVLK 431

Query: 306 ---AADTW--------------------TYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
               A+ W                    T+   ID LC+NG + +A+E+F  +   +C  
Sbjct: 432 CLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTP 491

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           DI  Y+SLI+G  + G  ++A +LFRS+PC     ++ +Y+  + GLC   + D A +L 
Sbjct: 492 DIVTYSSLINGFSEQGLDKVAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELI 548

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            DM     +PN +TF++LI    +    ++ IE+  +M +  + PD
Sbjct: 549 ADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPD 594



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 223/500 (44%), Gaps = 107/500 (21%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  +T   LIK LCA  R+ +A  +   L+  G   D  ++ TLV G CR      A  +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E  A  +G        N VTYT +IDG C+ G +  A  L+  M    + P+  TY +V
Sbjct: 176 LEA-ARASGA------ANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTV 225

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G C+AK W EA+ L  EM+     PN VTF   +   C+NG +D A  LL+ M ++G 
Sbjct: 226 LKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGC 285

Query: 201 RPDAFTYNTLLDGF--------------------------------CLTGRVNHAKELFV 228
            PD   Y+TL++GF                                C+ GR +   EL  
Sbjct: 286 MPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIA 345

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M    C     ++S LIN  C+N+  E A+ +  +M   G  PDVV +NT+     E  
Sbjct: 346 EMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQA 405

Query: 289 QVERAFKLFDEM-------QRNGV-----AADTW--------------------TYRTFI 316
             + A KL + M         N V      A+ W                    T+   I
Sbjct: 406 CADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILI 465

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC---- 372
           D LC+NG + +A+E+F  +   +C  DI  Y+SLI+G  + G  ++A +LFRS+PC    
Sbjct: 466 DSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADI 525

Query: 373 -------------------GVLV---------PNVVTYSIMIGGLCNDGQMDKARDLFLD 404
                              G L+         PN VT++I+I  LC  G +++A +++  
Sbjct: 526 FSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQ 585

Query: 405 MEENAVVPNVITFDMLIRGF 424
           M +  + P++ T++ LI G+
Sbjct: 586 MPKYGITPDIFTYNALINGY 605



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 203/381 (53%), Gaps = 18/381 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +L     P+ V + + +KGLC   R  E   L  ++    C P+  T+
Sbjct: 303 GRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATF 359

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+N LC+      A+ + E+M     ++G +  P+ V+Y TII    ++   D A +L
Sbjct: 360 STLINSLCQNRLAEYAIEVLEQMQ----KYGYM--PDVVSYNTIISCFSEQACADDALKL 413

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M     KP+ +++ +V++  C A+ W +A  L  +M+ +    N +TFN+++D LC+
Sbjct: 414 LNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQ 470

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++ +A  + +LM ++   PD  TY++L++GF   G    A +LF    SM C+  +FS
Sbjct: 471 NGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLF---RSMPCRADIFS 527

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  + G C     + A  L ++M++K   P+ V  N L   L +   V RA +++++M 
Sbjct: 528 YNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMP 587

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+  D +TY   I+G  + G + +A++   T   + CE D  +YNS++ GLC++ R +
Sbjct: 588 KYGITPDIFTYNALINGYSEQGCLDDALKFLST---MPCEPDTISYNSILKGLCRAERWK 644

Query: 362 IALELFRSLPCGVLVPNVVTY 382
            A +L   +      PN VT+
Sbjct: 645 DAEKLVTEMLRKNCTPNEVTF 665



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 202/428 (47%), Gaps = 18/428 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTF + I+  C    +  A  L  ++  +GC PDV  Y+TLVNG         AL L
Sbjct: 252 PNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKL 311

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M         +C PNTV Y   + GLC  G  D+  EL+ +M  K+  PN  T++++
Sbjct: 312 LSTM---------LCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTL 362

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C  +    A  +  +M   G  P+VV++N I+    +    D+A +LL+ M+    
Sbjct: 363 INSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---C 419

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD  ++N +L   C   R   A EL   M    C     +++ILI+  C+N +++ A+ 
Sbjct: 420 KPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIE 479

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++  M      PD+V +++L  G  E    + AF LF  M      AD ++Y   + GLC
Sbjct: 480 MFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMP---CRADIFSYNATLKGLC 536

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
                 +A EL   +    C  +   +N LI+ LC+ G +  A+E++  +P   + P++ 
Sbjct: 537 MAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIF 596

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I G    G +D A      M      P+ I+++ +++G  R        +L+ +M
Sbjct: 597 TYNALINGYSEQGCLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEM 653

Query: 441 KEINVMPD 448
              N  P+
Sbjct: 654 LRKNCTPN 661



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 188/402 (46%), Gaps = 17/402 (4%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P V T   L+  LC       A  + E +             + V++ T++ G C++G +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGAA-------DAVSHNTLVAGYCRDGSL 169

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A E +L+    +   NVVTYT++I G+C +    +A RL   M    V P+  T+N +
Sbjct: 170 WDA-ERVLEAARASGAANVVTYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTV 225

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC   + +EA  L+  MI++   P+  T+ T +  FC  G ++ A EL   M   GC
Sbjct: 226 LKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGC 285

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V  YS L+NG+ ++  ++ AL L S ML    +P+ V +N    GL    + +   +
Sbjct: 286 MPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGE 342

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  EM R     +  T+ T I+ LC+N     A+E+   ++      D+ +YN++I    
Sbjct: 343 LIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFS 402

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +    + AL+L  S+ C    P+ ++++ ++  LC   +   A +L   M +     N +
Sbjct: 403 EQACADDALKLLNSMLCK---PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEM 459

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           TF++LI    +  +    IE+   M +    PD    S +++
Sbjct: 460 TFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLIN 501



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 158/303 (52%), Gaps = 8/303 (2%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P V+T N+++ +LC   ++ +A R+L+ +   G   DA ++NTL+ G+C  G +  A+ +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
             +  + G  + V +Y+ LI+GYC++  +  AL L + M    + PD   +NT+  GL  
Sbjct: 176 LEAARASGAANVV-TYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLKGLCF 231

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
             Q E A +L  EM RN    +  T+ T I   C+NG +  AVEL   +    C  D+  
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y++L++G  + GR++ AL+L  ++ C    PN V Y+  + GLC  G+ D+  +L  +M 
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
                PN  TF  LI    +       IE+L +M++   MPD    + ++   ++   + 
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACAD 408

Query: 467 NSL 469
           ++L
Sbjct: 409 DAL 411



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 173/366 (47%), Gaps = 11/366 (3%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P  +T   +I  LC    +  A+ +L  +K      + V++ +++ G+C      +A+R+
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGAA-DAVSHNTLVAGYCRDGSLWDAERV 175

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
                  G   NVVT+  ++D  C++G++ +A RL+  M    V PD +TYNT+L G C 
Sbjct: 176 LEAARASGAA-NVVTYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLKGLCF 231

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             +   A+EL   M    C     +++  I  +C+N  ++ A+ L  +M   G  PDVVI
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           ++TL  G  E  +V+ A KL   M       +T  Y   + GLC  G   E  EL   + 
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
              C  +   +++LI+ LC++   E A+E+   +     +P+VV+Y+ +I         D
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACAD 408

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L   M      P+ I+F+ +++   R        EL+ KM + +   +    +I++
Sbjct: 409 DALKLLNSM---LCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILI 465

Query: 457 DLLAKN 462
           D L +N
Sbjct: 466 DSLCQN 471


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 237/438 (54%), Gaps = 8/438 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+  T+  LIK  C + +I +A +L   +     +PDVF+Y TL+NG+ +    + AL 
Sbjct: 148 SPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALK 207

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTYT 138
           +F+EM+      GVV   +   Y  +IDG  K G  DK KE+  ++ KD ++ PNVVTY 
Sbjct: 208 VFDEMS----VRGVV--ADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYN 261

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G C    ++E+  ++  M     + ++ T++ ++  LC+ G +D A R+   +++ 
Sbjct: 262 IMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVES 321

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            +  DA T+N +L+GFC  G++  + EL++ M    C+ TV SY+ILI G  +N ++E A
Sbjct: 322 SLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEA 380

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           +S++  +  KG +P+   +  L  GL +  ++ +A K+F E +      D + Y + +DG
Sbjct: 381 ISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDG 440

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G + EA+ + + +     + D    N LI+G  ++ +LE A+  FR + C    P 
Sbjct: 441 LCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPT 500

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +V+Y+ +I GLC   +  +A     +M E    P++IT  +L+ G  +  +    + L  
Sbjct: 501 IVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQ 560

Query: 439 KMKEINVMPDASIVSIVV 456
           +  +    PD ++ +I++
Sbjct: 561 QALDKGFKPDITMYNILM 578



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 238/456 (52%), Gaps = 8/456 (1%)

Query: 2   GRVSHGFVVLGRILKSCFT-PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G    G  +  R++K C   P+ VT+  +I GLC   R  E+  ++ ++     E D+FT
Sbjct: 235 GDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFT 294

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y++L++GLC   +   A+ +++E+     E  +V +   VT+  +++G C+ G + ++ E
Sbjct: 295 YSSLIHGLCEAGNIDGAVRVYKEIV----ESSLVVD--AVTHNAMLNGFCRAGKIKESFE 348

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L + M  +N +  VV+Y  +I+G        EA  ++  +  +G +P   T+ V++  LC
Sbjct: 349 LWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLC 407

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG++++A ++         + DA+ Y++++DG C  GR++ A  +   M+  G K    
Sbjct: 408 KNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPH 467

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
             + LING+ +  ++E A++ + EM  KG  P +V +NTL  GL +  +   A+    EM
Sbjct: 468 VCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEM 527

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                  D  T    +DGLC+   I  A+ L+        + DI  YN L+ GLC   +L
Sbjct: 528 LEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKL 587

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E AL+L+  +     VPN+VT + ++ GL      +KA +++  + ++ + P++I++++ 
Sbjct: 588 EDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNIT 647

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           I+G    +  S  IE L+      ++P A   +I+V
Sbjct: 648 IKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 236/493 (47%), Gaps = 50/493 (10%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTSHT 74
           + C   + V  T +IK         +A   F  ++ +FGC+P V +Y TL+N        
Sbjct: 74  QKCPCKEDVALT-VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAF------ 126

Query: 75  IVALNLFEEMANGNGEF-GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
            V LN ++   + +  F  +   PN  TY  +I   CK+  ++KA  LL  M  +N+KP+
Sbjct: 127 -VELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPD 185

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           V +Y ++I G     D   A ++F EM  +GV  +V  +N+++D   K+G  D+   + +
Sbjct: 186 VFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWE 245

Query: 194 LMIQH-GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
            +++   V P+  TYN +++G C  GR + + E++  M     +  +F+YS LI+G C+ 
Sbjct: 246 RLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEA 305

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             I+GA+ +Y E++   +  D V HN +  G     +++ +F+L+  M +        +Y
Sbjct: 306 GNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVV-SY 364

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              I GL +NG + EA+ ++  L    C  +   Y  LI GLCK+GRL  AL++F+    
Sbjct: 365 NILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAED 424

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDK----------------------------------- 397
           G    +   YS M+ GLC +G+MD+                                   
Sbjct: 425 GPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLED 484

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A + F +ME     P +++++ LI+G  +    S+    + +M E    PD    S+++D
Sbjct: 485 AINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMD 544

Query: 458 LLAKN---EISLN 467
            L +    E++LN
Sbjct: 545 GLCQEKKIEMALN 557


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 232/449 (51%), Gaps = 10/449 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +  R+L    +P+ V+ + LIKG C   RI+EA  LF ++   G EP + T
Sbjct: 393 LGRVIQ---IYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILT 449

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+ G C++ +      L+E+M          CEP+T+ Y+ +I+GLCK+G V  A  
Sbjct: 450 YSALIAGFCKSGNLRDGFYLYEDMIKKR------CEPDTIVYSVLINGLCKQGLVGDALR 503

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              Q  ++ + PNV T  +++  FC  K    A +++  M    ++ + VT+ +++    
Sbjct: 504 FFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAA 563

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G++DEA  L   M++   +PD  TY TL+DG C   + +    +F  M        + 
Sbjct: 564 QFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIA 623

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y++LIN + +   +E AL L+  ++ +G KPDV   NT+        +++ A +LF +M
Sbjct: 624 IYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKM 683

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS-GR 359
               +  +  T+   ID  C+ G + +A+ +F  +     E ++  Y+ LI G  KS   
Sbjct: 684 TSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSM 743

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +E  L+L+  +    + PN+V+YSI+I GLC  G M +A   F    +  ++P+VI + +
Sbjct: 744 MESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTI 803

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LIRG+ ++   ++ + L   M    + PD
Sbjct: 804 LIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 243/471 (51%), Gaps = 30/471 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT------ 74
           P+ VTF++LI   C E  + +A  LF  +   G  PD+  Y+ L++GL +          
Sbjct: 305 PNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRL 364

Query: 75  -IVALNL--------FEEMANGN---GEFGVVCE-----------PNTVTYTTIIDGLCK 111
            +VAL+         F    +     G+ G V +           PN V+ + +I G C+
Sbjct: 365 LLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQ 424

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G + +A  L +Q+     +P+++TY+++I GFC + +  +   L+ +M+ +  +P+ + 
Sbjct: 425 NGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIV 484

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           ++V+++ LCK G + +A R     +  G+ P+ FT NTLLD FC    +  A +++  M 
Sbjct: 485 YSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMG 544

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
            +  K    +Y+ILI G  +   ++ AL L+ +ML K  KPDV+ + TL  GL ++ +  
Sbjct: 545 MLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSS 604

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
               +FD M +N VA D   Y   I+   + G++  A+ LF  +     + D+  +N++I
Sbjct: 605 AGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI 664

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
              C   RL+ A++LF  +    L PN +T++I+I   C +G+MD A  +F  M E    
Sbjct: 665 CCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPE 724

Query: 412 PNVITFDMLIRGFIRINEPSKV-IELLHKMKEINVMPDASIVSIVVDLLAK 461
           PN++T+  LI G+ +     +  ++L ++M E N+ P+    SI++D L K
Sbjct: 725 PNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCK 775



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 248/487 (50%), Gaps = 12/487 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G      +++  F  D +T   ++KG+  ++ I  A   F  +   G +P+V T+
Sbjct: 251 GEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTF 310

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL++  C+  +   A  LF+ MA GNG       P+ + Y+ +IDGL K G ++  + L
Sbjct: 311 STLIDAYCKEGNLDKAFVLFDVMA-GNG-----VTPDLIVYSILIDGLFKAGRLEDGQRL 364

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           LL   DK IK +VV ++S +  +    D     +++  M+++G+ PNVV+ ++++   C+
Sbjct: 365 LLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQ 424

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++ EA  L   +++ G  P   TY+ L+ GFC +G +     L+  M    C+     
Sbjct: 425 NGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIV 484

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS+LING CK   +  AL  + + +++G+ P+V   NTL      +  +  A K++  M 
Sbjct: 485 YSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMG 544

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGR 359
              + ADT TY   I G  + G + EA+ LF   ++LK +F  D+  Y +LIDGLCK  +
Sbjct: 545 MLNIKADTVTYTILIKGAAQFGRVDEALMLF--FQMLKKDFKPDVITYCTLIDGLCKLKK 602

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
               L +F  +    + P++  Y+++I     +G ++ A  LF+ + E    P+V TF+ 
Sbjct: 603 SSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNT 662

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           +I  +         ++L  KM    + P+A   +I++D   +     +++  F+  +  E
Sbjct: 663 MICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFS--KMLE 720

Query: 480 EVDESNV 486
           E  E N+
Sbjct: 721 EGPEPNL 727



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 200/453 (44%), Gaps = 26/453 (5%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTYTTLVNGLC---RTSHTIVAL 78
           A +F +L+  L        AA +F K  + FG + D  T     +G C    T+H++V  
Sbjct: 114 APSFCALLHVLLQNQLFSRAACVFDKFIMQFGNDYD--TLDAFRDGFCDLDSTNHSVVYG 171

Query: 79  NLFEEMANGNGEF-------------GVVCEPNTVTYT--TIIDGLCKEGFVDKAKELLL 123
            L E      G F             G+   PN V     ++ID  C E  VDK  EL  
Sbjct: 172 FLIESYCR-KGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCS 230

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M+++        Y  V+  F    +     R    ++  G   +++T N I+  +    
Sbjct: 231 AMREQPFS----VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQN 286

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +  A    +++++ G +P+  T++TL+D +C  G ++ A  LF  M   G    +  YS
Sbjct: 287 DIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYS 346

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           ILI+G  K   +E    L    L KGIK DVV  ++      +I  + R  +++  M   
Sbjct: 347 ILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNE 406

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G++ +  +    I G C+NG I+EA  LF  +  L  E  I  Y++LI G CKSG L   
Sbjct: 407 GISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDG 466

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             L+  +      P+ + YS++I GLC  G +  A   F       + PNV T + L+  
Sbjct: 467 FYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDS 526

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           F R+      +++ + M  +N+  D    +I++
Sbjct: 527 FCRLKCIVGAMKVYYLMGMLNIKADTVTYTILI 559



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 153/294 (52%), Gaps = 7/294 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+T LIKG     R+ EA  LF ++     +PDV TY TL++GLC+   +   L +F
Sbjct: 551 DTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIF 610

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + M            P+   Y  +I+   +EG ++ A  L + + ++  KP+V T+ ++I
Sbjct: 611 DFMCKN------AVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI 664

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
             +C  K  ++A +LF +M  + ++PN +TF +++D  C+ G+MD+A  +   M++ G  
Sbjct: 665 CCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPE 724

Query: 202 PDAFTYNTLLDG-FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           P+  TY+ L+ G F     +    +L+  M        + SYSILI+G CK   ++ A  
Sbjct: 725 PNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASC 784

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            +   L K + PDV+ +  L  G  ++ ++  A  L+D M  N +  D +  RT
Sbjct: 785 AFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERT 838



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 147/293 (50%), Gaps = 12/293 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV    ++  ++LK  F PD +T+ +LI GLC   +      +F  +      PD+  Y
Sbjct: 566 GRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIY 625

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N   R  H   AL LF  +     +      P+  T+ T+I   C    +D A +L
Sbjct: 626 NVLINMHSREGHLEAALGLFVHVVERGPK------PDVFTFNTMICCYCNFKRLDDAVQL 679

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  + ++PN +T+T +I  FC     ++A  +F +M+++G +PN+VT++ ++    K
Sbjct: 680 FAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFK 739

Query: 182 NGKMDEAS-RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  M E+  +L + M+++ + P+  +Y+ L+DG C  G +  A   F           V 
Sbjct: 740 SQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVI 799

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           +Y+ILI GYCK   +  A+ LY  ML   + PD  +  TL     E +Q+++A
Sbjct: 800 AYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL-----EEYQLKKA 847



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 163/379 (43%), Gaps = 43/379 (11%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI--KPNVVTYT--SVIRGFCYAKDWNEA 153
           ++V Y  +I+  C++G  DK+ ++ + +  K I   PNVV     S+I   C     ++ 
Sbjct: 166 HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKY 225

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             L   M +Q        +  +M+     G+++   R    ++Q G   D  T N +L G
Sbjct: 226 GELCSAMREQPFS----VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKG 281

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
             +   +  A + F                                   + ++  G KP+
Sbjct: 282 IWMQNDIGVADDYF-----------------------------------NMVVRIGPKPN 306

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV  +TL     +   +++AF LFD M  NGV  D   Y   IDGL K G + +   L  
Sbjct: 307 VVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLL 366

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
                  + D+  ++S +D   K G L   +++++ +    + PNVV+ SI+I G C +G
Sbjct: 367 VALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNG 426

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           ++ +A  LF+ + +    P+++T+  LI GF +         L   M +    PD  + S
Sbjct: 427 RILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYS 486

Query: 454 IVVDLLAKNEISLNSLPSF 472
           ++++ L K  +  ++L  F
Sbjct: 487 VLINGLCKQGLVGDALRFF 505


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 215/404 (53%), Gaps = 8/404 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ ++F  +IK +C    +  A  LF ++ V  C PD +TY TL++GLC+      A++L
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM          C P+  T+  +I+GLCK+G   +  +L+  M  K   PN VTY ++
Sbjct: 239 LDEMQIEG------CFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTL 292

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C     ++A  L   M+     PN VT+  I++ L K G+  + +R+L LM + G 
Sbjct: 293 IHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGY 352

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             + + Y+ L+ G    G+   A  LF      GCK     YS L++G C++++ + A+ 
Sbjct: 353 IVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMK 412

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + SEM  KG  P+    ++L  G FE+    +A +++ +M +   A +   Y   I GLC
Sbjct: 413 ILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLC 472

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC--GVLVPN 378
           K+G ++EA+ ++  +    C  D+ AY+S+I GLC +G +E AL+L+  + C      P+
Sbjct: 473 KDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPD 532

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           V+TY+I+   LC    + +A DL   M +    P+++T ++ +R
Sbjct: 533 VITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLR 576



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 212/406 (52%), Gaps = 8/406 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V ++  ++  +C+      A+ LF EM          C P+  TY T++DGLCK   +
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRK------CVPDAYTYCTLMDGLCKVDRI 232

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A  LL +M+ +   P+  T+  +I G C   D+    +L   M  +G  PN VT+N +
Sbjct: 233 DEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTL 292

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC  GK+D+A  LLD M+     P+  TY T+++G    GR      + V ME  G 
Sbjct: 293 IHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGY 352

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
               + YS+L++G  K  + E A+ L+ E + KG K + V+++ L  GL    + + A K
Sbjct: 353 IVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMK 412

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +  EM   G A + +T+ + + G  + G   +A+E++  +  + C  +   Y+ LI GLC
Sbjct: 413 ILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLC 472

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM--EENAVVPN 413
           K G++  A+ ++  +      P+VV YS MI GLC+ G +++A  L+ +M   E    P+
Sbjct: 473 KDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPD 532

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           VIT+++L     + +  S+ ++LL+ M +    PD    +I + +L
Sbjct: 533 VITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRML 578



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 203/442 (45%), Gaps = 45/442 (10%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT---YTTLVNGLCRTSHTIVALNLF 81
           TF SLI+     S       +  ++R+   E  VF+   +  +     +      A+ LF
Sbjct: 74  TFYSLIENYAYSSDFNSLEKVLNRMRL---ENRVFSEKSFFVMFKAYGKAHLPNKAIELF 130

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             M+     F   C+P   ++ ++++ + + GF D+A E                Y  V+
Sbjct: 131 YRMS-----FEFYCKPTVKSFNSVLNVIIQAGFHDRALEF---------------YNHVV 170

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
                AKD N             + PNV++FN+I+  +CK G +D A  L   M      
Sbjct: 171 G----AKDMN-------------ILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCV 213

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PDA+TY TL+DG C   R++ A  L   M+  GC  +  ++++LING CK  +      L
Sbjct: 214 PDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKL 273

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              M  KG  P+ V +NTL  GL    ++++A  L D M  +    +  TY T I+GL K
Sbjct: 274 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVK 333

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR-SLPCGVLVPNVV 380
            G  ++   +   +       +   Y+ L+ GL K G+ E A+ LF+ S+  G  + N V
Sbjct: 334 QGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKL-NTV 392

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            YS ++ GLC D + D+A  +  +M +    PN  TF  L++GF  +    K IE+   M
Sbjct: 393 LYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDM 452

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
            +IN   +    S+++  L K+
Sbjct: 453 TKINCAENEVCYSVLIHGLCKD 474



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 160/303 (52%), Gaps = 11/303 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L R++ S   P+ VT+ ++I GL  + R ++ A +   +   G   + + Y
Sbjct: 300 GKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVY 359

Query: 62  TTLVNGLCRTSHTIVALNLFEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + LV+GL +   +  A+ LF+E M  G       C+ NTV Y+ ++DGLC++   D+A +
Sbjct: 360 SVLVSGLFKEGKSEEAMRLFKESMDKG-------CKLNTVLYSALVDGLCRDRKPDEAMK 412

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L +M DK   PN  T++S+++GF    + ++A  ++ +M       N V ++V++  LC
Sbjct: 413 ILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLC 472

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM--GCKHT 238
           K+GK+ EA  +   M+  G RPD   Y++++ G C  G V  A +L+  M  +    +  
Sbjct: 473 KDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPD 532

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE-IHQVERAFKLF 297
           V +Y+IL N  CK   I  A+ L + ML +G  PD+V  N     L E +   +   K  
Sbjct: 533 VITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFL 592

Query: 298 DEM 300
           DE+
Sbjct: 593 DEL 595



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 141/310 (45%), Gaps = 15/310 (4%)

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAF-----TYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +NG   E+S + D +     +  +F     T+ +L++ +  +   N  +++   +  M  
Sbjct: 44  ENGSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKV---LNRMRL 100

Query: 236 KHTVFS---YSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVE 291
           ++ VFS   + ++   Y K      A+ L+  M      KP V   N++   + +    +
Sbjct: 101 ENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHD 160

Query: 292 RAFKLFDEM---QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           RA + ++ +   +   +  +  ++   I  +CK G +  A+ELF  + + KC  D   Y 
Sbjct: 161 RALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYC 220

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +L+DGLCK  R++ A+ L   +      P+  T++++I GLC  G   +   L  +M   
Sbjct: 221 TLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLK 280

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
             VPN +T++ LI G     +  K + LL +M     +P+      +++ L K   +L+ 
Sbjct: 281 GCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDG 340

Query: 469 LPSFTVHEQQ 478
                + E++
Sbjct: 341 ARVLVLMEER 350



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 24/203 (11%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + V ++ LI GLC + ++MEA  ++ K+   GC PDV  Y++++ GLC       AL L+
Sbjct: 460 NEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLY 519

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM     +     +P+ +TY  + + LCK+  + +A +LL  M D+   P++VT     
Sbjct: 520 NEMLCLEPD----SQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCN--- 572

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQP---NVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
                         +F+ M+ + + P        + ++  L K  +   AS+++++M+Q 
Sbjct: 573 --------------IFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQK 618

Query: 199 GVRPDAFTYNTLLDGFCLTGRVN 221
            + P A T+  ++   C   ++ 
Sbjct: 619 FLSPKASTWARVVHELCQPKKIQ 641


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 228/461 (49%), Gaps = 10/461 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      +L  + +    PDAV + ++I  LC +  + EAA L  ++ + GC  DV T
Sbjct: 172 LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNT 231

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  +V G+C       A  L + M          C P  +TY  ++ GLC+    D+A+ 
Sbjct: 232 FDDVVRGMCGLGRVREAARLVDRMMTKG------CMPGVMTYGFLLQGLCRVRQADEARA 285

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L ++ + N    VV + +VI G        EA  L+  M  +G QP+  T++++M  LC
Sbjct: 286 MLGRVPELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 341

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++  A RLL  M + G  P+  TY  +L  FC  G  +  + L   M + G      
Sbjct: 342 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 401

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ +I   CK+  ++ A+ L  EM S+G  PD+  +NT+   L    Q+E A  +F+ +
Sbjct: 402 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 461

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV A+  TY T I  L ++G   +AV L   + +  C  D+ +YN LI  +CK G +
Sbjct: 462 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 521

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + +L L   +    + PN V+Y+I+I  LC + ++  A +L   M    + P+++T++ L
Sbjct: 522 DRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL 581

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I G  ++      + LL K+   NV PD    +I++    K
Sbjct: 582 INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 622



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 226/457 (49%), Gaps = 11/457 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    +L  +L      D  TF  +++G+C   R+ EAA L  ++   GC P V TY
Sbjct: 208 GGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY 267

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLCR      A  +           G V E N V + T+I G   EG + +A EL
Sbjct: 268 GFLLQGLCRVRQADEARAML----------GRVPELNVVLFNTVIGGCLAEGKLAEATEL 317

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  K  +P+  TY+ ++ G C       A RL  EM  +G  PNVVT+ +++   CK
Sbjct: 318 YETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 377

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG  D+   LL+ M   G+  ++  YN ++   C  GR++ A  L   M S GC   + S
Sbjct: 378 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 437

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I   C N+++E A  ++  +L +G+  + + +NT+   L    + + A +L  EM 
Sbjct: 438 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 497

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G + D  +Y   I  +CK+G +  ++ L   +     + +  +YN LI  LCK  R+ 
Sbjct: 498 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 557

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALEL + +    L P++VTY+ +I GLC  G M  A +L   +    V P++IT+++LI
Sbjct: 558 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617

Query: 422 RGFIRINEPSKVIELLHK-MKEINVMPDASIVSIVVD 457
               ++        LL++ M  +  + D  I+ I+ D
Sbjct: 618 SWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPD 654



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 212/441 (48%), Gaps = 10/441 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   TF    + LC   R  EA AL   +   GC PD   Y T+++ LC       A  L
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM        + C  +  T+  ++ G+C  G V +A  L+ +M  K   P V+TY  +
Sbjct: 217 LNEM------LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFL 270

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G C  +  +EA+     M+ +  + NVV FN ++      GK+ EA+ L + M   G 
Sbjct: 271 LQGLCRVRQADEAR----AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGC 326

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PDA TY+ L+ G C  GR+  A  L   ME  G    V +Y+I+++ +CKN   +   +
Sbjct: 327 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 386

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM +KG+  +   +N +   L +  +++ A  L  EM+  G   D  +Y T I  LC
Sbjct: 387 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 446

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            N  + EA  +F  L       +   YN++I  L + GR + A+ L + +       +VV
Sbjct: 447 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 506

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y+ +I  +C DG +D++  L  +M E  + PN +++++LI    +       +EL  +M
Sbjct: 507 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 566

Query: 441 KEINVMPDASIVSIVVDLLAK 461
               + PD    + +++ L K
Sbjct: 567 LNQGLAPDIVTYNTLINGLCK 587



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 137/299 (45%), Gaps = 4/299 (1%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V P   TF V    LC+ G+ DEA  LL  M +HG  PDA  Y T++   C  G V  A 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            L   M  MGC   V ++  ++ G C    +  A  L   M++KG  P V+ +  L  GL
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
             + Q + A  +   +    V      + T I G    G + EA EL+ T+ +  C+ D 
Sbjct: 275 CRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y+ L+ GLCK GR+  A+ L R +      PNVVTY+I++   C +G  D  R L  +
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           M    +  N   ++ +I    +     + + L+ +M+     PD    + ++  L  NE
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 449



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 1/156 (0%)

Query: 292 RAFKLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           R F L+  M  R+ V   T+T+      LC+ G   EA+ L   +    C  D   Y ++
Sbjct: 141 RRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 200

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I  LC  G +  A  L   +       +V T+  ++ G+C  G++ +A  L   M     
Sbjct: 201 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 260

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
           +P V+T+  L++G  R+ +  +   +L ++ E+NV+
Sbjct: 261 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV 296


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 221/423 (52%), Gaps = 6/423 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G ++LG +      P  VT+ +L+  L  +  + + A+L +++R     P+V  Y
Sbjct: 308 GDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIY 367

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++ LC+      AL + ++M  G       C+P+ +T++T+I GLC+EG V +A+ L
Sbjct: 368 NSVIDALCKCRSASQALVVLKQMFAGG------CDPDAITFSTLISGLCQEGRVQEAERL 421

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +     + PN+ +YTS+I GFC   +   A  L +EMM++G  P+VVTF  ++  L  
Sbjct: 422 LRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVV 481

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA  + + M    + PDA  YN L+ G C    +  A+ L   M         + 
Sbjct: 482 AGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYV 541

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+ +N+ ++ A  ++  M  KGI PDVV +N +  G  +   +  A +    M+
Sbjct: 542 YTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMR 601

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G   D +TY T I G  K G I  A+ L   +   +C+ ++ AY+SLI+G CK G  +
Sbjct: 602 KVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTD 661

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF S+    L PNV+TY+I+IG L    ++ +A   F  M  N   PN  T   L+
Sbjct: 662 AAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLV 721

Query: 422 RGF 424
            G 
Sbjct: 722 TGL 724



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 214/441 (48%), Gaps = 21/441 (4%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
            S   VVL ++      PDA+TF++LI GLC E R+ EA  L  +   +   P++ +YT+
Sbjct: 380 ASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTS 439

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++G C     IVA NL  EM     E G    P+ VT+  +I GL   G V +A  +  
Sbjct: 440 LIHGFCVRGEVIVASNLLVEMM----ERGHT--PDVVTFGALIHGLVVAGQVSEALLVRE 493

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M  + + P+   Y  +I G C  K    A+ L  EM++Q V P+   +  ++D   +N 
Sbjct: 494 KMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNE 553

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +DEA ++ + M Q G+ PD   YN ++ G+C  G +N A E   +M  +G     F+Y+
Sbjct: 554 SLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYT 613

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI GY K   I GALSL  +M+ +  +P+VV +++L  G  ++   + A  LF  M+  
Sbjct: 614 TLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQ 673

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  +  TY   I  L K   +V A   F  + + +C  +    +SL+ GLC S    I+
Sbjct: 674 GLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIIS 733

Query: 364 ---------------LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
                          L++FR+L      P    Y+ +I  LC    + +A DL   M   
Sbjct: 734 SHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANK 793

Query: 409 AVVPNVITFDMLIRGFIRINE 429
              P+  TF  L+ GF  + +
Sbjct: 794 GYKPDSATFLSLLYGFCSVGK 814



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 211/435 (48%), Gaps = 6/435 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           +++GLC E  + +   L       GC P+   Y  L++G CR       + L  EM    
Sbjct: 265 MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEM-EAK 323

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           G       P  VTY T++  L ++G ++K   LL +M+++ + PNV  Y SVI   C  +
Sbjct: 324 GLL-----PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCR 378

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
             ++A  +  +M   G  P+ +TF+ ++  LC+ G++ EA RLL    +  + P+  +Y 
Sbjct: 379 SASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYT 438

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           +L+ GFC+ G V  A  L V M   G    V ++  LI+G     ++  AL +  +M ++
Sbjct: 439 SLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAAR 498

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
            + PD  I+N L  GL +   +  A  L +EM    V  D + Y T IDG  +N  + EA
Sbjct: 499 QLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEA 558

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            ++F  +       D+  YN++I G C+ G +  A+E   ++     +P+  TY+ +IGG
Sbjct: 559 RKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGG 618

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               G +  A  L  DM +    PNV+ +  LI G+ ++ +      L   M+   + P+
Sbjct: 619 YAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPN 678

Query: 449 ASIVSIVVDLLAKNE 463
               +I++  L K +
Sbjct: 679 VITYTILIGSLFKKD 693



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 160/324 (49%), Gaps = 6/324 (1%)

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
            G  P     N ++  L +  + D+A +L D M+      D ++   ++ G CL G V  
Sbjct: 218 HGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEK 277

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
             +L  +    GC      Y++LI+GYC+  ++   + L  EM +KG+ P VV + TL  
Sbjct: 278 GLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMS 337

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
            L     +E+   L  EM+   +  +   Y + ID LCK     +A+ +   +    C+ 
Sbjct: 338 WLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDP 397

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D   +++LI GLC+ GR++ A  L R      L PN+ +Y+ +I G C  G++  A +L 
Sbjct: 398 DAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLL 457

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++M E    P+V+TF  LI G +   + S+ + +  KM    ++PDA+I ++++  L K 
Sbjct: 458 VEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKK 517

Query: 463 EISLNSLPSFTVHEQQEEVDESNV 486
           ++    LP+       EE+ E NV
Sbjct: 518 KM----LPA--ARNLIEEMLEQNV 535



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 160/329 (48%)

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
           W++A++L+ EM+ +    +  +  V++  LC  G +++  +L++     G  P+A  YN 
Sbjct: 240 WDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNV 299

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           L+DG+C  G V     L   ME+ G   TV +Y  L++   +  ++E   SL SEM  + 
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           + P+V I+N++   L +     +A  +  +M   G   D  T+ T I GLC+ G + EA 
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAE 419

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
            L       +   ++ +Y SLI G C  G + +A  L   +      P+VVT+  +I GL
Sbjct: 420 RLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGL 479

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
              GQ+ +A  +   M    ++P+   +++LI G  +         L+ +M E NV PD 
Sbjct: 480 VVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDK 539

Query: 450 SIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
            + + ++D   +NE    +   F   EQ+
Sbjct: 540 YVYTTLIDGFIRNESLDEARKIFEFMEQK 568


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 219/408 (53%), Gaps = 9/408 (2%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D   Y TL+ GLC+      AL L   MA  NG      + + VTYTT+IDGLCK G +D
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMA-ANGY-----DASVVTYTTLIDGLCKSGDLD 62

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
            A+ LL +M D    PNVVTYT++I G C A+  ++A +    M+  G +P++VT+N ++
Sbjct: 63  AAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLI 122

Query: 177 DELCKNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
             LC   +MD+A  +L +LMI+ G  PD  TYNT + G C  G+++   E+   M+  G 
Sbjct: 123 HGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGI 182

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V ++  +I+G CK   I+ A  ++  ML +G  PD + ++ +   L   ++++   +
Sbjct: 183 SPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEE 242

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + + M ++G  A + TY   I  L + G I  A   +       C  ++  +N+ I  LC
Sbjct: 243 VLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALC 302

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV-PNV 414
           +SG+  +A  +   +     +PN+++Y+ +I GLC  G +D A  L   M ++    P+V
Sbjct: 303 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 362

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINV-MPDASIVSIVVDLLAK 461
           I F+ LI GF +    S+  +LL +MK  N+ +PD    + ++D  +K
Sbjct: 363 IFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSK 410



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 220/429 (51%), Gaps = 9/429 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F  DA  + +LI GLC   +   A  L   +   G +  V TYTTL++GLC++     A 
Sbjct: 6   FRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQ 65

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L ++MA+        C PN VTYT +IDGLCK      A + + +M     +P++VTY 
Sbjct: 66  ALLQKMADAG------CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYN 119

Query: 139 SVIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           S+I G C A   ++A  +  E+M + G  P+VVT+N  +  LCK GK+D+   +L+ M +
Sbjct: 120 SLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDR 179

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ PD  T+ +++ G C   R++ A ++F  M   GC     +YSI+++   +   ++ 
Sbjct: 180 GGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDT 239

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
              +   M+  G       +  L   L     +E A   +++    G   + +T+  FI 
Sbjct: 240 VEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIG 299

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LPCGVLV 376
            LC++G    A  +   +       ++ +YN +IDGLCKSG ++ A +L R  L  G   
Sbjct: 300 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK 359

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           P+V+ ++ +I G C  G++ +A+ L  +M+ +N  VP+V+T++ +I G  +     +   
Sbjct: 360 PDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKL 419

Query: 436 LLHKMKEIN 444
           LL +M+ + 
Sbjct: 420 LLEEMQAVG 428



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/407 (31%), Positives = 208/407 (51%), Gaps = 15/407 (3%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           H   +L  +  + +    VT+T+LI GLC    +  A AL  K+   GC P+V TYT L+
Sbjct: 28  HALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALI 87

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ- 124
           +GLC+      A+   + M          CEP+ VTY ++I GLC    +D A  L+LQ 
Sbjct: 88  DGLCKARRPHDAIQTVKRMLRSG------CEPDLVTYNSLIHGLCMANRMDDAG-LVLQE 140

Query: 125 -MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M +    P+VVTY + I G C A   ++   +  EM   G+ P+VVTF  I+  LCK  
Sbjct: 141 LMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKAN 200

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++D+A ++   M++ G  PD+ TY+ +LD      R++  +E+   M   G      +Y+
Sbjct: 201 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYA 260

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+   +  +IE A   Y + +  G   +V  HN     L    +   A  +   M  +
Sbjct: 261 PLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIES 320

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK---CEFDIRAYNSLIDGLCKSGRL 360
           G   +  +Y   IDGLCK+G + +A +L  + ++L    C+ D+  +N+LI G CK+GRL
Sbjct: 321 GSLPNLLSYNFVIDGLCKSGNVDDAWKL--SRKMLDSGCCKPDVIFFNTLISGFCKAGRL 378

Query: 361 EIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
             A +L + +    + VP+VVTY+ MI G    G + +A+ L  +M+
Sbjct: 379 SQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 164/353 (46%), Gaps = 38/353 (10%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M  ++ + +   Y ++I G C A+    A  L   M   G   +VVT+  ++D LCK+G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D A  LL  M   G  P+  TY  L+DG C   R + A +    M   GC+  + +Y+ 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 245 LINGYC-KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           LI+G C  N+  +  L L   M+  G  PDVV +NT   GL +  ++++  ++ +EM R 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G++ D  T+ + I GLCK   I +A ++F  +    C  D   Y+ ++D L ++ RL+  
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 364 LELF------------------------------------RSLPCGVLVPNVVTYSIMIG 387
            E+                                     +++  G  V  V T++  IG
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGC-VMEVYTHNAFIG 299

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            LC  G+   A+++ L M E+  +PN+++++ +I G  +        +L  KM
Sbjct: 300 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 352



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 156/330 (47%), Gaps = 44/330 (13%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTYTTLVNGLCRT 71
           R+L+S   PD VT+ SLI GLC  +R+ +A  +  +L +  G  PDV TY T ++GLC+ 
Sbjct: 105 RMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKA 164

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                 L + EEM  G         P+ VT+ +II GLCK   +D A ++   M ++   
Sbjct: 165 GKLDKGLEMLEEMDRGG------ISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCV 218

Query: 132 PNVVTYT-----------------------------------SVIRGFCYAKDWNEAKRL 156
           P+ +TY+                                    +I     A D   A   
Sbjct: 219 PDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWA 278

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           + + M+ G    V T N  +  LC++GK   A  +L  MI+ G  P+  +YN ++DG C 
Sbjct: 279 YEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 338

Query: 217 TGRVNHAKELFVSMESMGC-KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDV 274
           +G V+ A +L   M   GC K  V  ++ LI+G+CK   +  A  L  EM +K I  PDV
Sbjct: 339 SGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDV 398

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           V +NT+  G  +   +++A  L +EMQ  G
Sbjct: 399 VTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 141/270 (52%), Gaps = 8/270 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++  G  +L  + +   +PD VTF S+I GLC  +RI +A  +F  +   GC PD  TY
Sbjct: 165 GKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTY 224

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + +++ L R +       + E M   +G + +     + TY  +I  L + G ++ A   
Sbjct: 225 SIMLDNLSRANRLDTVEEVLEHMVK-SGHYAL-----SATYAPLIHALIRAGDIESASWA 278

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             Q  +      V T+ + I   C +  +  AK + + M++ G  PN++++N ++D LCK
Sbjct: 279 YEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 338

Query: 182 NGKMDEASRLLDLMIQHG-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTV 239
           +G +D+A +L   M+  G  +PD   +NTL+ GFC  GR++ A++L   M++   C   V
Sbjct: 339 SGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDV 398

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKG 269
            +Y+ +I+G  K   ++ A  L  EM + G
Sbjct: 399 VTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 2/202 (0%)

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M S+  + D  I+NTL  GL +  +   A +L   M  NG  A   TY T IDGLCK+G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A  L   +    C  ++  Y +LIDGLCK+ R   A++  + +      P++VTY+ 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 385 MIGGLCNDGQMDKARDLFLD-MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           +I GLC   +MD A  +  + M E+  +P+V+T++  I G  +  +  K +E+L +M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 444 NVMPD-ASIVSIVVDLLAKNEI 464
            + PD  +  SI+  L   N I
Sbjct: 181 GISPDVVTFCSIISGLCKANRI 202


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 218/406 (53%), Gaps = 6/406 (1%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           LKS    DA +F  +IKG C     ++   L   L  FG  P+V  YTTL++G C+  + 
Sbjct: 150 LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNV 209

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
           ++A NLF +M       G+V  PN  TY+ +++G  K+G   +  ++   MK   I PN 
Sbjct: 210 MLAKNLFCKM----DRLGLV--PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
             Y  +I  +C     ++A ++F EM ++G+   V+T+N+++  LC+  K  EA +L+  
Sbjct: 264 YAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           + + G+ P+  TYN L++GFC  G+++ A  LF  ++S G   T+ +Y+ LI GY K + 
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           + GAL L  EM  + I P  V +  L      ++  E+A ++   M+++G+  D +TY  
Sbjct: 384 LAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSV 443

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I GLC +G + EA +LF +L  +  + +   YN++I G CK G    AL L   +    
Sbjct: 444 LIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSG 503

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +VPNV ++   IG LC D +  +A  L   M  + + P+V  + M+
Sbjct: 504 MVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 212/435 (48%), Gaps = 7/435 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P + TF +L+  L   +   +A  +F +L+      D +++  ++ G C   + +    L
Sbjct: 122 PLSNTFNNLMCLLIRSNYFDKAWWIFNELKS-KVVLDAYSFGIMIKGCCEAGYFVKGFRL 180

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              +     EFG+   PN V YTT+IDG CK G V  AK L  +M    + PN  TY+ +
Sbjct: 181 LAMLE----EFGL--SPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVL 234

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GF       E  +++  M   G+ PN   +N ++ E C  G +D+A ++   M + G+
Sbjct: 235 MNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGI 294

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
                TYN L+ G C   +   A +L   +  +G    + +Y+ILING+C   +++ A+ 
Sbjct: 295 ACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVR 354

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L++++ S G+ P +V +NTL  G  ++  +  A  L  EM+   +A    TY   ID   
Sbjct: 355 LFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFA 414

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           +  Y  +A E+   +       D+  Y+ LI GLC  G ++ A +LF+SL    L PN V
Sbjct: 415 RLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSV 474

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+ MI G C +G   +A  L  +M  + +VPNV +F   I    R  +  +   LL +M
Sbjct: 475 IYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQM 534

Query: 441 KEINVMPDASIVSIV 455
               + P  S+  +V
Sbjct: 535 INSGLKPSVSLYKMV 549



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 179/362 (49%), Gaps = 1/362 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C   T  Y TI++        D+A   L  M  +   P   T+ +++     +  +++A 
Sbjct: 85  CLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAW 144

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            +F E+  + V  +  +F +++   C+ G   +  RLL ++ + G+ P+   Y TL+DG 
Sbjct: 145 WIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G V  AK LF  M+ +G      +YS+L+NG+ K         +Y  M   GI P+ 
Sbjct: 204 CKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +N L         V++AFK+F EM+  G+A    TY   I GLC+     EAV+L H 
Sbjct: 264 YAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +  +    +I  YN LI+G C  G+++ A+ LF  L    L P +VTY+ +I G      
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +  A DL  +MEE  + P+ +T+ +LI  F R+N   K  E+   M++  ++PD    S+
Sbjct: 384 LAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSV 443

Query: 455 VV 456
           ++
Sbjct: 444 LI 445



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 222/490 (45%), Gaps = 47/490 (9%)

Query: 10  VLGRILKSCFTPDAVTFT-SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           +L  +L S   P A +    LI G    S +++     T+     C      Y T+VN  
Sbjct: 44  ILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQ----LTQAHFTPCLTYTPLYDTIVNAY 99

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
             +  T  AL     M +  G       P + T+  ++  L +  + DKA  +  ++K K
Sbjct: 100 VHSHSTDQALTFLHHMIH-EGHV-----PLSNTFNNLMCLLIRSNYFDKAWWIFNELKSK 153

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            +  +  ++  +I+G C A  + +  RL   + + G+ PNVV +  ++D  CK G +  A
Sbjct: 154 -VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLA 212

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L   M + G+ P+  TY+ L++GF   G      +++ +M+  G     ++Y+ LI+ 
Sbjct: 213 KNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISE 272

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           YC    ++ A  +++EM  KGI   V+ +N L  GL    +   A KL  ++ + G++ +
Sbjct: 273 YCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPN 332

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY   I+G C  G +  AV LF+ L+       +  YN+LI G  K   L  AL+L +
Sbjct: 333 IVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392

Query: 369 SL------PCGV-----------------------------LVPNVVTYSIMIGGLCNDG 393
            +      P  V                             LVP+V TYS++I GLC  G
Sbjct: 393 EMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHG 452

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            M +A  LF  + E  + PN + ++ +I G+ +     + + LL++M    ++P+ +   
Sbjct: 453 NMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFC 512

Query: 454 IVVDLLAKNE 463
             + LL ++E
Sbjct: 513 STIGLLCRDE 522



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 6/207 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  ++  S  +P  VT+ +LI G      +  A  L  ++      P   T
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++   R ++T  A  +   M       G+V  P+  TY+ +I GLC  G + +A +
Sbjct: 406 YTILIDAFARLNYTEKACEMHSLMEKS----GLV--PDVYTYSVLIHGLCVHGNMKEASK 459

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   + + +++PN V Y ++I G+C       A RL  EM+  G+ PNV +F   +  LC
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLC 519

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTY 207
           ++ K  EA  LL  MI  G++P    Y
Sbjct: 520 RDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 239/482 (49%), Gaps = 25/482 (5%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++S + PDA TF SLI G C  +++  A  LF K+ + G   DV +Y TL+ GLC    
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 74  TIVALNLFEEMANGN----------------GEFGVV---------CEPNTVTYTTIIDG 108
              A+ LF EM   +                GE G++           P+T  Y  ++D 
Sbjct: 61  IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            C+E    +A+E+L +M +K + P VVT T+VI  +C     ++A R+   M  +G +PN
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           V T+N ++   C  GK+ +A  LL+ M   GV PDA TYN L+ G C+ G +  A  L  
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            ME  G     ++Y+ LIN  CK+   + A SL+  + ++GIKP+ V  N+L  GL +  
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           + + A+K  ++M   G   DT+TY +FI+ LCK     E +     +     +     Y 
Sbjct: 301 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 360

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            +I  L K     +    +  +      P+VVTY+  +   C +G++++A ++ ++M +N
Sbjct: 361 IVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 420

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
            V  + + ++ L+ G   I +    + +L +M  +  +P+     I++  L +  +  + 
Sbjct: 421 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 480

Query: 469 LP 470
           LP
Sbjct: 481 LP 482



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 222/483 (45%), Gaps = 23/483 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G ++L R+ +  + P    + +++   C E +  EA  +  ++   G  P V T T
Sbjct: 91  RGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCT 150

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++N  C+      AL + E M          C+PN  TY  ++ G C EG V KA  LL
Sbjct: 151 AVINAYCKEGRMSDALRVLELMKLRG------CKPNVWTYNALVQGFCNEGKVHKAMTLL 204

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+   + P+ VTY  +IRG C       A RL   M   G+  +  T+N +++ LCK+
Sbjct: 205 NKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKD 264

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+ D+A  L D +   G++P+A T+N+L++G C +G+ + A +    M S GC    ++Y
Sbjct: 265 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTY 324

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S  I   CK K  +  LS   EML K +KP  V +  +   L +        + + EM  
Sbjct: 325 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS 384

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G   D  TY T +   C  G + EA  +   +       D  AYN+L+DG    G+ + 
Sbjct: 385 SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDH 444

Query: 363 ALELFRSLPCGVLVPNVVTYSIMI-----------------GGLCNDGQMDKARDLFLDM 405
           A+ + + +     VPN  TY I++                  G+    ++     LF  M
Sbjct: 445 AVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 504

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           ++N  +PN  T+  ++ GF       +   L+  MKE ++  +  I + +V    K++  
Sbjct: 505 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 564

Query: 466 LNS 468
           L++
Sbjct: 565 LDA 567



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 219/462 (47%), Gaps = 24/462 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  +       D  T+ +LI  LC + R  +A +LF  L   G +P+  T+
Sbjct: 230 GHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 289

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC++    +A    E+M +        C P+T TY++ I+ LCK     +    
Sbjct: 290 NSLINGLCKSGKADIAWKFLEKMVSAG------CTPDTYTYSSFIEHLCKMKGSQEGLSF 343

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M  K++KP+ V YT VI      +++    R + EM+  G  P+VVT+   M   C 
Sbjct: 344 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 403

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++EA  +L  M ++GV  D   YNTL+DG    G+ +HA  +   M S+      F+
Sbjct: 404 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 463

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y IL+    + + +E  L L                     G+++  ++   F LFD M+
Sbjct: 464 YFILLRHLVRMRLVEDVLPLTP------------------AGVWKAIELTDVFGLFDVMK 505

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +N    ++ TY + ++G  ++G   EA  L   ++      +   Y +L+   CKS R  
Sbjct: 506 KNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYL 565

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L  S+     +P +++Y  ++ GL  +GQ DKA+++F++       P+ I + ++I
Sbjct: 566 DAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVII 625

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            G I+        E++  ++ +N  P     +++ + L   E
Sbjct: 626 DGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDRE 667



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 5/356 (1%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +P+  T+ S+I G+C     + A+ LF +M  +G   +VV++  +++ LC+ G++DEA  
Sbjct: 7   RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVE 66

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M Q    PD   Y  L+ G C   R      +   M+ +G + +  +Y+ +++  C
Sbjct: 67  LFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRC 122

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           + ++ + A  +  EM  KG+ P VV    +     +  ++  A ++ + M+  G   + W
Sbjct: 123 RERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW 182

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY   + G C  G + +A+ L + +R      D   YN LI G C  G +E A  L R +
Sbjct: 183 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 242

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               L+ +  TY+ +I  LC DG+ D+A  LF  +E   + PN +TF+ LI G  +  + 
Sbjct: 243 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 302

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNV 486
               + L KM      PD    S  ++ L K + S   L SF     Q++V  S V
Sbjct: 303 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL-SFIGEMLQKDVKPSTV 357


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 214/401 (53%), Gaps = 8/401 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   + VL R+    F+PD VT+  LI  LC+   +  A     +L    C+P V TYT
Sbjct: 141 RIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYT 200

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+           A+ L +EM   N       +P+  TY +II G+C+EG+VD+A +++
Sbjct: 201 ILIEATLLQGGIDEAMKLLDEMLEIN------LQPDMFTYNSIIRGMCREGYVDRAFQII 254

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             +  K   P+V+TY  ++RG      W     L  +M+ +G + NVVT++V++  +C++
Sbjct: 255 SSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRD 314

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK++E   LL  M + G++PD + Y+ L+   C  GRV+ A E+   M S GC   + +Y
Sbjct: 315 GKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNY 374

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + ++   CK K  + ALS++ ++   G  P+   +N++F  L+      RA  +  EM  
Sbjct: 375 NTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLD 434

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI--LKCEFDIRAYNSLIDGLCKSGRL 360
            GV  D  TY + I  LC++G + EA+EL   + +   +C+  + +YN ++ GLCK  R+
Sbjct: 435 KGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRV 494

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
             A+E+  ++      PN  TY+ +I G+   G ++ ARDL
Sbjct: 495 SDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 228/458 (49%), Gaps = 9/458 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  +     L  ++     PD V  T LI GL     I +A  +   L   G  PD+  Y
Sbjct: 71  GNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAY 129

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ G CR +    A  + + M N          P+ VTY  +I  LC  G +D A E 
Sbjct: 130 NAIITGFCRANRIDSAYQVLDRMKNKG------FSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             Q+  +N KP VVTYT +I         +EA +L  EM++  +QP++ T+N I+  +C+
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A +++  +   G  PD  TYN LL G    G+     EL   M + GC+  V +
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS+LI+  C++ ++E  + L  +M  KG+KPD   ++ L   L +  +V+ A ++ D M 
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   D   Y T +  LCK     EA+ +F  L  + C  +  +YNS+   L  +G   
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD--MEENAVVPNVITFDM 419
            AL +   +    + P+ +TY+ +I  LC DG +D+A +L +D  ME +   P+V+++++
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           ++ G  +++  S  IE+L  M +    P+ +  + +++
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIE 521



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 224/462 (48%), Gaps = 14/462 (3%)

Query: 11  LGRILKSCFTPDAVTF----TSLIKGL---CAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           + R L S   P   T     T L+K L   C      E+      L   G +PDV   T 
Sbjct: 38  INRTLSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTK 97

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++GL  +     A+ +   + N          P+ + Y  II G C+   +D A ++L 
Sbjct: 98  LIHGLFTSKTIDKAIQVMHILENHG-------HPDLIAYNAIITGFCRANRIDSAYQVLD 150

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +MK+K   P++VTY  +I   C     + A     +++ +  +P VVT+ ++++     G
Sbjct: 151 RMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQG 210

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +DEA +LLD M++  ++PD FTYN+++ G C  G V+ A ++  S+ S G    V +Y+
Sbjct: 211 GIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYN 270

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           IL+ G     + E    L S+M+++G + +VV ++ L   +    +VE    L  +M++ 
Sbjct: 271 ILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKK 330

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  D + Y   I  LCK G +  A+E+   +    C  DI  YN+++  LCK  R + A
Sbjct: 331 GLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEA 390

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L +F  L      PN  +Y+ M   L + G   +A  + L+M +  V P+ IT++ LI  
Sbjct: 391 LSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISC 450

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
             R     + IELL  M+  +     S+VS  + LL   ++S
Sbjct: 451 LCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVS 492



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 163/328 (49%), Gaps = 1/328 (0%)

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A ++NE+      ++++G +P+VV    ++  L  +  +D+A +++ ++  HG  PD 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             YN ++ GFC   R++ A ++   M++ G    + +Y+ILI   C    ++ AL   ++
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           +L +  KP VV +  L         ++ A KL DEM    +  D +TY + I G+C+ GY
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A ++  ++       D+  YN L+ GL   G+ E   EL   +       NVVTYS+
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  +C DG++++   L  DM++  + P+   +D LI    +       IE+L  M    
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 445 VMPDASIVSIVVDLLAKNEISLNSLPSF 472
            +PD    + ++  L K + +  +L  F
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIF 394



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 141/285 (49%), Gaps = 8/285 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F ++  I    + PD +T+  L++GL  + +      L + +   GCE +V TY
Sbjct: 245 GYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTY 304

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++ +CR       + L ++M           +P+   Y  +I  LCKEG VD A E+
Sbjct: 305 SVLISSVCRDGKVEEGVGLLKDMKKKG------LKPDGYCYDPLIAALCKEGRVDLAIEV 358

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M      P++V Y +++   C  K  +EA  +F ++ + G  PN  ++N +   L  
Sbjct: 359 LDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWS 418

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME--SMGCKHTV 239
            G    A  ++  M+  GV PD  TYN+L+   C  G V+ A EL V ME  S  CK +V
Sbjct: 419 TGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSV 478

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            SY+I++ G CK   +  A+ + + M+ KG +P+   +  L  G+
Sbjct: 479 VSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 9/252 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V  G  +L  + K    PD   +  LI  LC E R+  A  +   +   GC PD+  Y
Sbjct: 315 GKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNY 374

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++  LC+      AL++FE++    GE G  C PN  +Y ++   L   G   +A  +
Sbjct: 375 NTILACLCKQKRADEALSIFEKL----GEVG--CSPNASSYNSMFSALWSTGHKVRALGM 428

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI--EMMDQGVQPNVVTFNVIMDEL 179
           +L+M DK + P+ +TY S+I   C     +EA  L +  EM     +P+VV++N+++  L
Sbjct: 429 ILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGL 488

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK  ++ +A  +L  M+  G RP+  TY  L++G    G +N A++L  ++ +M    + 
Sbjct: 489 CKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAI-SE 547

Query: 240 FSYSILINGYCK 251
            S+  L   +CK
Sbjct: 548 HSFERLYKTFCK 559


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 246/502 (49%), Gaps = 45/502 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGRV    V  G +      PD VT+ ++IK  C E  +  A   F  L   G EP+ FT
Sbjct: 167 MGRVYSQLVQDGLL------PDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFT 220

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
              LV G CRT     A  LF  M        + C+ N  +YT +I GLC+   V +A  
Sbjct: 221 CNALVLGYCRTGELRKACWLFLMMPL------MGCQRNEYSYTILIQGLCEAKCVREALV 274

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L MK     PNV  +T +I G C +    +A+ LF  M   GV P+V+T+N ++    
Sbjct: 275 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 334

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M++A ++ +LM ++G  PD +TYNTL+ G C   +   A+EL  +    G   TV 
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVV 393

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ LINGYC  ++ + AL + ++M+S   K D+ +   L   L +  +++ A +L +E+
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             NG+  +  TY + IDG CK+G +  A+E+   +    C+ +   YNSL+ GL K  +L
Sbjct: 454 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN-----VI 415
             A+ L   +    ++PNV+TY+ ++ G C++   D A  LF  ME+N + P+     V+
Sbjct: 514 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 573

Query: 416 T---------------------------FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           T                           +  LI GF +         L+ +M +    PD
Sbjct: 574 TDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 633

Query: 449 ASIVSIVVDLLAKNEISLNSLP 470
           +   S+++  L K +    +LP
Sbjct: 634 SYTYSVLLHALCKQKRLNEALP 655



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 244/513 (47%), Gaps = 74/513 (14%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+   FT LI GLC   R+ +A  LF  +   G  P V TY  ++ G  +      AL 
Sbjct: 285 SPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALK 344

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + +E+   NG     C P+  TY T+I GLC +   ++A+ELL     +   P VVT+T+
Sbjct: 345 I-KELMEKNG-----CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTN 397

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G+C A+ +++A R+  +MM    + ++  F  +++ L K  ++ EA  LL+ +  +G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+  TY +++DG+C +G+V+ A E+   ME  GC+   ++Y+ L+ G  K+K++  A+
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 517

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +L ++M   GI P+V+ + TL  G  + H  + AF+LF+ M++NG+  D   Y    D L
Sbjct: 518 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 320 CKNGYIVEA-----------VELFHTLRI---------------------LKCEFDIRAY 347
           CK G   EA            ++++T  I                       C  D   Y
Sbjct: 578 CKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 637

Query: 348 NSLIDGLCKSGRLEIALEL-----FRSLPCGVLV-------------------------- 376
           + L+  LCK  RL  AL +      R + C +                            
Sbjct: 638 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697

Query: 377 ----PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               P+  TY++ I   C +G+++ A DL L ME   V P+V+T+++LI G   +    +
Sbjct: 698 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 757

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
               L +M   +  P+     +++  L K  ++
Sbjct: 758 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLA 790



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 227/476 (47%), Gaps = 25/476 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     VL  + +    P+A T+ SL+ GL  + ++ +A AL TK++  G  P+V TY
Sbjct: 476 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITY 535

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL+ G C       A  LFE M   NG      +P+   Y  + D LCK G  ++A   
Sbjct: 536 TTLLQGQCDEHDFDNAFRLFE-MMEQNG-----LKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +++   K +    V YT++I GF  A + + A  L   M+D+G  P+  T++V++  LCK
Sbjct: 590 IVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 646

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA  +LD M   G++   F Y  L+D     G+ +HAK ++  M S G K +  +
Sbjct: 647 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 706

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++ IN YCK   +E A  L  +M  +G+ PDVV +N L  G   +  ++RAF     M 
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766

Query: 302 RNGVAADTWTYRTFIDGLCKN--GYIVEA--------VELFHTLRILK------CEFDIR 345
                 + WTY   +  L K    Y+           +EL  T ++L+          + 
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y+SLI G CK+GRLE A  L   +    L PN   Y+++I   C+    +KA      M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            E    P + ++ +L+ G     +  KV  L   + E+    D     I+ D L K
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 942



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 161/340 (47%), Gaps = 22/340 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       ++ R++    TPD+ T++ L+  LC + R+ EA  +  ++ + G +  +F Y
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++ + R      A  ++ EM +   +      P+  TYT  I+  CKEG ++ A++L
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHK------PSATTYTVFINSYCKEGRLEDAEDL 726

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +L+M+ + + P+VVTY  +I G  +    + A      M+    +PN  T+ +++  L K
Sbjct: 727 ILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK 786

Query: 182 NG----------------KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
                             ++D   +LL+ M++HG+ P   TY++L+ GFC  GR+  A  
Sbjct: 787 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 846

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M   G       Y++LI   C  K  E ALS  S M   G +P +  +  L VGL 
Sbjct: 847 LLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLC 906

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
                E+   LF ++   G   D   ++   DGL K GY+
Sbjct: 907 NEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 946



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 162/361 (44%), Gaps = 24/361 (6%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           V +T+LI G         AA L  ++   GC PD +TY+ L++ LC+      AL + ++
Sbjct: 600 VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQ 659

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M+      G+ C      YT +ID + +EG  D AK +  +M     KP+  TYT  I  
Sbjct: 660 MSLR----GIKC--TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           +C      +A+ L ++M  +GV P+VVT+N+++D     G +D A   L  M+     P+
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773

Query: 204 AFTYNTLLDGFCLTGRVNHAK-----------------ELFVSMESMGCKHTVFSYSILI 246
            +TY  LL    L G + + +                 +L   M   G   TV +YS LI
Sbjct: 774 YWTYCLLLKHL-LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 832

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G+CK   +E A  L   M  KG+ P+  I+  L     +    E+A      M   G  
Sbjct: 833 AGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQ 892

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
               +YR  + GLC  G   +   LF  L  L    D  A+  L DGL K+G ++I  ++
Sbjct: 893 PQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQM 952

Query: 367 F 367
            
Sbjct: 953 L 953



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 48/303 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+  H   +   +  S   P A T+T  I   C E R+ +A  L  K+   G  PDV TY
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGE--FGVVC------------------------ 95
             L++G     +   A +  + M   + E  +   C                        
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 802

Query: 96  -------------------EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
                               P   TY+++I G CK G +++A  LL  M  K + PN   
Sbjct: 803 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 862

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           YT +I+  C  K + +A      M + G QP + ++ +++  LC  G  ++   L   ++
Sbjct: 863 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G   D   +  L DG    G V+   ++   ME   C  +  +Y+++ N   K  E+ 
Sbjct: 923 ELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN---KMHEVS 979

Query: 257 GAL 259
            +L
Sbjct: 980 SSL 982



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 41/96 (42%)

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           + YN  +  L +    E    ++  L    L+P+ VTY+ MI   C +G +  A   F  
Sbjct: 149 KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRL 208

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           + E  + P   T + L+ G+ R  E  K   L   M
Sbjct: 209 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 232/461 (50%), Gaps = 27/461 (5%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L     P+  T+  LI+ LC      EA ++   +R  GC P+V TY TLV    R   
Sbjct: 141 MLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 200

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  L   M +G        +PN VT+ ++++G+CK G ++ A+++  +M  + + P+
Sbjct: 201 VDGAERLVGMMLDGG------LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPD 254

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            V+Y +++ G+C A   +EA  +F EM  +G+ P+VVTF  ++  +CK G ++ A  L+ 
Sbjct: 255 GVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVR 314

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M + G++ +  T+  L+DGFC  G ++ A      M     K +V  Y+ LINGYC   
Sbjct: 315 QMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVG 374

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++ A  L  EM +KG+KPDVV ++T+     +      AF+L  +M   GV  D  TY 
Sbjct: 375 RMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYS 434

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I  LC+   + +A  LF  +  L  + D   Y SLIDG CK G +E AL L   +   
Sbjct: 435 SLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKA 494

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD--------------- 418
            ++P+VVTYS++I GL    +  +A+ L   +     +P    +D               
Sbjct: 495 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVL 554

Query: 419 MLIRGFIR---INEPSKVIELLHKMKEINVMPDASIVSIVV 456
            L++GF     +NE  KV +    M + N   D S+ S+++
Sbjct: 555 ALLKGFCMKGLMNEADKVYQ---SMLDRNWNLDGSVYSVLI 592



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 236/491 (48%), Gaps = 44/491 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     ++G +L     P+ VTF S++ G+C   ++ +A  +F ++   G  PD  +Y
Sbjct: 199 GEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSY 258

Query: 62  TTLVNGLCRTSHTIVALNLFEEMAN--------------------GNGEFGVV------- 94
            TLV G C+   +  AL++F EM                      GN E+ V        
Sbjct: 259 NTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRE 318

Query: 95  --CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              + N VT+T +IDG CK+GF+D A   +  M+   IKP+VV Y ++I G+C     +E
Sbjct: 319 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDE 378

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+ L  EM  +G++P+VVT++ I+   CKN     A  L   M++ GV PDA TY++L+ 
Sbjct: 379 ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 438

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C   R++ A  LF +M  +G +   F+Y+ LI+G+CK   +E ALSL+ +M+  G+ P
Sbjct: 439 VLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLP 498

Query: 273 DVVIHNTLFVGLFEIHQVERA----FKL-----------FDEMQRNGVAADTWTYRTFID 317
           DVV ++ L  GL +  +   A    FKL           +D +      A+  +    + 
Sbjct: 499 DVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLK 558

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C  G + EA +++ ++       D   Y+ LI G C++G +  AL   + +      P
Sbjct: 559 GFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAP 618

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           N  +   +I GL  +G + +A  +   +     + +      LI   +       V+++L
Sbjct: 619 NSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVL 678

Query: 438 HKMKEINVMPD 448
           H M +  ++P 
Sbjct: 679 HGMAKDGLLPS 689



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 208/430 (48%), Gaps = 42/430 (9%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  P V  Y  ++  L   S T  A   F+ M +     GV   PN  TY  +I  LC  
Sbjct: 111 GYVPSVLAYNAVLLALSDASLT-SARRFFDSMLSD----GVA--PNVYTYNILIRALCGR 163

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G   +A  +L  M+     PNVVTY +++  F  A + + A+RL   M+D G++PN+VTF
Sbjct: 164 GHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTF 223

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N +++ +CK GKM++A ++ D M++ G+ PD  +YNTL+ G+C  G  + A  +F  M  
Sbjct: 224 NSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 283

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------------------- 269
            G    V +++ LI+  CK   +E A++L  +M  +G                       
Sbjct: 284 KGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 343

Query: 270 ------------IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
                       IKP VV +N L  G   + +++ A +L  EM+  G+  D  TY T I 
Sbjct: 344 ALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIIS 403

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
             CKN     A EL   +       D   Y+SLI  LC+  RL  A  LF+++    L P
Sbjct: 404 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQP 463

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +  TY+ +I G C +G +++A  L   M +  V+P+V+T+ +LI G  +     +  +LL
Sbjct: 464 DEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523

Query: 438 HKMKEINVMP 447
            K+     +P
Sbjct: 524 FKLYHEEPIP 533



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 176/332 (53%), Gaps = 1/332 (0%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+V+ Y +V+     A     A+R F  M+  GV PNV T+N+++  LC  G   EA  +
Sbjct: 114 PSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L  M   G  P+  TYNTL+  F   G V+ A+ L   M   G K  + +++ ++NG CK
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
             ++E A  ++ EM+ +G+ PD V +NTL  G  +      A  +F EM + G+  D  T
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           + + I  +CK G +  AV L   +R    + +   + +LIDG CK G L+ AL   R + 
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+VV Y+ +I G C  G+MD+AR+L  +ME   + P+V+T+  +I  + +  +  
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
              EL  +M E  V+PDA   S ++ +L + +
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVLCEEK 444



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 26/335 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +L  +      PD VT++++I   C       A  L  ++   G  PD  T
Sbjct: 373 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 432

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y++L+  LC       A  LF+ M     + G+  +P+  TYT++IDG CKEG V++A  
Sbjct: 433 YSSLIRVLCEEKRLSDAHVLFKNMI----KLGL--QPDEFTYTSLIDGHCKEGNVERALS 486

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M    + P+VVTY+ +I G   +    EA++L  ++  +   P    ++ +M   C
Sbjct: 487 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM-HCC 545

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  ++                    +   LL GFC+ G +N A +++ SM          
Sbjct: 546 RKAELK-------------------SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGS 586

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            YS+LI+G+C+   +  ALS + +ML +G  P+     +L  GLFE   V  A ++  ++
Sbjct: 587 VYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 646

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
                 AD    +  ID     G +   +++ H +
Sbjct: 647 LNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGM 681



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 83/210 (39%), Gaps = 36/210 (17%)

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  P V+ +N + + L +   +  A + FD M  +GVA + +TY                
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTY---------------- 153

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
                              N LI  LC  G  + AL + R +      PNVVTY+ ++  
Sbjct: 154 -------------------NILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAA 194

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               G++D A  L   M +  + PN++TF+ ++ G  +  +     ++  +M    + PD
Sbjct: 195 FFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPD 254

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
               + +V    K   S  +L  F    Q+
Sbjct: 255 GVSYNTLVGGYCKAGCSHEALSVFAEMTQK 284


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 230/438 (52%), Gaps = 7/438 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    F  +IKGL  +    +A +LF ++   G  PD FTY  L++ LC+      ALNL
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           +E+M     E GV  +P  VTY +++   C  G +D+A +L  +M  K   PNVVTYT++
Sbjct: 409 WEKM----NETGV--KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G      +++A  L  EM   GV  N  T+N +++ LC  G++ E   +L      G 
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P A TYN++++GF   G +  A  ++  M + G    + +Y+  I+GYCK    + AL 
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + +++  KG++PD+  +N+L  G  +   +  A ++   M ++G+  +   Y +FI G  
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYK 642

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
               + EA+  +  +     + D   Y +LIDG  K G +  AL+L+  +     +P+ +
Sbjct: 643 NLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHI 702

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++ +  GLC +G +D AR L  +M    + PNV+ ++MLI G++R  +  +   L  +M
Sbjct: 703 TFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEM 762

Query: 441 KEINVMPDASIVSIVVDL 458
            E  +MPD +   I+V +
Sbjct: 763 LERKIMPDDTTYDILVGM 780



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 229/459 (49%), Gaps = 7/459 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
            +   +VL ++  + F P   TF S++  L    R+ EA  +  +L   G +  V   TT
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++G C       AL++FEE        G+V  P  VTYT +I G  +EG  +KA EL  
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRD----GLV--PTDVTYTVLIRGCTEEGMPEKAYELCR 341

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           QM+D  + P+   +  VI+G    K W +A  LF EM D G+ P+  T+N+++  LC+  
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRR 400

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ EA  L + M + GV+P   TY++LL  +C+ G ++ A +L+  M   G    V +Y+
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            L+ G+      + A +L +EM   G+  +   +NTL  GL  + +V    ++    +  
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE 520

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G      TY + I+G  K G +  A  ++  +       +I  Y S IDG CK+   ++A
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L++   + C  L P++  Y+ +I G C +G M  A  + + M ++ ++PN+  ++  I G
Sbjct: 581 LKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +  +    + +    KM +  +  D +  + ++D  +K+
Sbjct: 641 YKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKD 679



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 213/464 (45%), Gaps = 40/464 (8%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           DA  F  +++    E    +A  LF ++     EPD    +  +  LC+      AL + 
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M +     G V  P   T+ +++D L K G +++A  +  ++     K +VV  T+++
Sbjct: 236 RKMQDA----GFV--PWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLM 289

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C  ++  +A  +F E +  G+ P  VT+ V++    + G  ++A  L   M  HG+ 
Sbjct: 290 HGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349

Query: 202 ----------------------------------PDAFTYNTLLDGFCLTGRVNHAKELF 227
                                             PDAFTYN L+   C   ++  A  L+
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLW 409

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G K  + +Y  L+  YC N  ++ A+ LY+EM  KG  P+VV + TL  G    
Sbjct: 410 EKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINK 469

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
              ++A+ L  EM++NGV+ + +TY T I+GLC  G + E  E+               Y
Sbjct: 470 AAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTY 529

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           NS+I+G  K+G +  A  +++ +    + PN+VTY+  I G C     D A  +  D+  
Sbjct: 530 NSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC 589

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
             + P++  ++ LI GF +    S  +++L  M +  ++P+ S+
Sbjct: 590 KGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISV 633



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 174/367 (47%), Gaps = 4/367 (1%)

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           KEG  D A  L  +M    I+P+    +  I   C  +D N A  +  +M D G  P   
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDF 248

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           TFN ++D L K G+M+EA  + D ++  G +       TL+ G+CL   V  A ++F   
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G   T  +Y++LI G  +    E A  L  +M   G+ P     N +  GL      
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           + A  LF EM  +G+  D +TY   I  LC+   I EA+ L+  +     +  I  Y+SL
Sbjct: 369 KDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           +   C +G ++ A++L+  +P     PNVVTY+ ++ G  N    DKA  L  +M++N V
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
             N  T++ LI G   +    +V E+L + +    +P A   + +++   K  +  +   
Sbjct: 488 SCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS--- 544

Query: 471 SFTVHEQ 477
           +F V++Q
Sbjct: 545 AFAVYQQ 551



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 148/287 (51%), Gaps = 13/287 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +L R     F P A+T+ S+I G      +  A A++ ++   G  P++ T
Sbjct: 504 VGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVT 563

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGLCKEGFVDK 117
           YT+ ++G C+TS   +AL +  +         V C+   P+   Y ++I G C+EG +  
Sbjct: 564 YTSFIDGYCKTSCCDLALKMLND---------VRCKGLRPDIAAYNSLIYGFCQEGNMSH 614

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A ++L+ M    + PN+  Y S I G+   K   EA R + +M+ +G+  +  T+  ++D
Sbjct: 615 ALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLID 674

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
              K+G +  A +L   M+  G  PD  T+  L  G C  G ++ A++L   M  +  + 
Sbjct: 675 GFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRP 734

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            V  Y++LINGY +N +++ A  L+ EML + I PD   ++ L VG+
Sbjct: 735 NVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDIL-VGM 780



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 142/322 (44%), Gaps = 36/322 (11%)

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA-------------- 204
           EM  +G   +   F+V+M    K G  D+A RL D M    + PD               
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 205 ---------------------FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
                                FT+N+++D     GR+  A  +   + + G K +V   +
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            L++GYC  +E+  AL ++ E L  G+ P  V +  L  G  E    E+A++L  +M+ +
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+   T  +   I GL  +    +AV LF  +       D   YN LI  LC+  ++  A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREA 405

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L L+  +    + P +VTY  ++   C +G MD+A  L+ +M      PNV+T+  L++G
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 424 FIRINEPSKVIELLHKMKEINV 445
            I      K   LL +MK+  V
Sbjct: 466 HINKAAFDKAYALLAEMKQNGV 487



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 7/293 (2%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   GV PDA +   LL     +     A  L   M   G     + + +++    K   
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            + A+ L+ EM +  I+PD  + +     L ++    RA  +  +MQ  G     +T+ +
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +D L K G + EA+ +   L     +  +    +L+ G C    +  AL++F       
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           LVP  VTY+++I G   +G  +KA +L   M ++ ++P+   F+M+I+G +        +
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNVK 487
            L  +M +  + PDA   +I++  L +      +L  +      E+++E+ VK
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLW------EKMNETGVK 418


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 242/512 (47%), Gaps = 66/512 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     ++ R++    +P+   + +LI  LC   +  EA  LF ++   G  P+  TY
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVVC----------- 95
           + L++  CR      AL+   EM                NG+ +FG +            
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465

Query: 96  ---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              EP  VTYT+++ G C +G ++KA  L  +M  K I P++ T+T+++ G   A    +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A +LF EM +  V+PN VT+NV+++  C+ G M +A   L  M + G+ PD ++Y  L+ 
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G CLTG+ + AK     +    C+     Y+ L++G+C+  ++E ALS+  EM+ +G+  
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D+V +  L  G  +    +  F L  EM   G+  D   Y + ID   K G   EA  ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSG---------------------------------- 358
             +    C  +   Y ++I+GLCK+G                                  
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765

Query: 359 --RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
              ++ A+EL  ++  G+L  N  TY+++I G C  G++++A +L   M  + V P+ IT
Sbjct: 766 EVDMQKAVELHNAILKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  +I    R N+  K IEL + M E  + PD
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 213/449 (47%), Gaps = 6/449 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+P     +SL++GL    +I EA  L  ++  FG  P++F Y  L++ LC+      A 
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF+ M    G+ G+   PN VTY+ +ID  C+ G +D A   L +M D  +K +V  Y 
Sbjct: 388 LLFDRM----GKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I G C   D + A+    EM+++ ++P VVT+  +M   C  GK+++A RL   M   
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P  +T+ TLL G    G +  A +LF  M     K    +Y+++I GYC+  ++  A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
                EM  KGI PD   +  L  GL    Q   A    D + +     +   Y   + G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+ G + EA+ +   +     + D+  Y  LIDG  K    ++   L + +    L P+
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ MI      G   +A  ++  M     VPN +T+  +I G  +    ++   L  
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLN 467
           KM+ ++ +P+       +D+L K E+ + 
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 220/485 (45%), Gaps = 60/485 (12%)

Query: 3   RVSHGFVVLGR-ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           RV  G +V    I K    P+  T ++L+ GL        A  LF  +   G  PDV+ Y
Sbjct: 171 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 230

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           T ++  LC       A  +   M A G       C+ N V Y  +IDGLCK+  V +A  
Sbjct: 231 TGVIRSLCELKDLSRAKEMIAHMEATG-------CDVNIVPYNVLIDGLCKKQKVWEAVG 283

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   +  K++KP+VVTY +++ G C  +++     +  EM+     P+    + +++ L 
Sbjct: 284 IKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLR 343

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK++EA  L+  ++  GV P+ F YN L+D  C   + + A+ LF  M  +G +    
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDV 403

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YSILI+ +C+  +++ ALS   EM+  G+K  V                          
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV-------------------------- 437

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                    + Y + I+G CK G I  A      +   K E  +  Y SL+ G C  G++
Sbjct: 438 ---------YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL L+  +    + P++ T++ ++ GL   G +  A  LF +M E  V PN +T++++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD----------------ASIVSIVVDLLAKNEI 464
           I G+    + SK  E L +M E  ++PD                AS   + VD L K   
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 465 SLNSL 469
            LN +
Sbjct: 609 ELNEI 613



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 160/343 (46%), Gaps = 31/343 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S  F  L  + +    PD  ++  LI GLC   +  EA      L    CE +   Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC-------------------------- 95
           T L++G CR      AL++ +EM     +  +VC                          
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675

Query: 96  ---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              +P+ V YT++ID   K G   +A  +   M ++   PN VTYT+VI G C A   NE
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNG-KMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           A+ L  +M      PN VT+   +D L K    M +A  L + +++ G+  +  TYN L+
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLI 794

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            GFC  GR+  A EL   M   G      +Y+ +IN  C+  +++ A+ L++ M  KGI+
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           PD V +NTL  G     ++ +A +L +EM R G+  +  T RT
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 113/283 (39%), Gaps = 53/283 (18%)

Query: 234 GCKHTVFSYSILING--------------------------------------------- 248
           G  H+  S+ ILI+                                              
Sbjct: 99  GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSS 158

Query: 249 -------YCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
                  Y +++ +   + ++  M++K  + P+V   + L  GL +      A +LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+  D + Y   I  LC+   +  A E+   +    C+ +I  YN LIDGLCK  ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A+ + + L    L P+VVTY  ++ GLC   + +   ++  +M      P+      L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + G  +  +  + + L+ ++ +  V P+  + + ++D L K  
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 233/458 (50%), Gaps = 6/458 (1%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           +K    P+  T+  LI  LC    +  A  +   ++  G  P+V T   +++ LC+    
Sbjct: 399 MKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKL 458

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A ++FE M +       +C P+ VT+ ++IDGL K+G VD A  L  QM D +  PN 
Sbjct: 459 DEACSIFEGMNHK------ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNA 512

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           V YTS+I+ F       +  ++F EM+ +G  P++   N  MD + K G+  +   L + 
Sbjct: 513 VVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEE 572

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           +   G  PD  +Y+ L+ G    G      ELF +M+  GC     +Y+  I+G+CK+ +
Sbjct: 573 IKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGK 632

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  A  L  EM +KG +P VV + ++  GL +I +++ A+ LF+E + NG+  +   Y +
Sbjct: 633 VNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSS 692

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            IDG  K G I EA  +   L       ++  +N L+D L K+  +  AL  F+++    
Sbjct: 693 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLK 752

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             PN +TYSI+I GLC   + +KA   + +M++  + PN IT+  +I G  +    ++  
Sbjct: 753 GTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEAS 812

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
            L  + K    +PD++  + +++ L+ +  ++ +   F
Sbjct: 813 SLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIF 850



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 224/497 (45%), Gaps = 42/497 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  +  +C   D V +   I       ++  A   F +++  G  PD  TY
Sbjct: 247 GRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTY 306

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+++  LC+ +    A+ +FE+M            P    Y T+I G    G  D+A  L
Sbjct: 307 TSMIGVLCKGNRLDEAVEIFEQMEQNRNV------PCAYAYNTMIMGYGSAGKFDEAYSL 360

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L + K +   P+V+ Y  ++          EA R F E M +   PN+ T+NV++D LCK
Sbjct: 361 LERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTF-EEMKKDAAPNLSTYNVLIDMLCK 419

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++ A ++ D M + G+ P+  T N ++D  C   +++ A  +F  M    C     +
Sbjct: 420 AGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVT 479

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK------ 295
           +  LI+G  K   ++ A  LY +ML     P+ V++ +L    F+  + E   K      
Sbjct: 480 FCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMI 539

Query: 296 -----------------------------LFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
                                        LF+E++  G   D  +Y   I GL K G+  
Sbjct: 540 HRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFAR 599

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           E  ELF+ ++   C  D  AYN+ IDG CKSG++  A +L   +      P VVTY  +I
Sbjct: 600 ETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVI 659

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GL    ++D+A  LF + + N +  NV+ +  LI GF ++    +   ++ ++ +  + 
Sbjct: 660 DGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 719

Query: 447 PDASIVSIVVDLLAKNE 463
           P+    + ++D L K E
Sbjct: 720 PNVYTWNCLLDALVKAE 736



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 194/397 (48%), Gaps = 41/397 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIK---------------------GLCAESRIM 40
           GRV   + +  ++L S   P+AV +TSLIK                     G   + R++
Sbjct: 491 GRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLL 550

Query: 41  EA--------------AALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
            A               ALF +++  G  PDV +Y+ L++GL +         LF  M  
Sbjct: 551 NAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKE 610

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                   C  +T  Y T IDG CK G V+KA +LL +MK K  +P VVTY SVI G   
Sbjct: 611 QG------CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAK 664

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
               +EA  LF E    G++ NVV ++ ++D   K G++DEA  +++ ++Q G+ P+ +T
Sbjct: 665 IDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 724

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           +N LLD       +N A   F +M+++       +YSILING C+ ++   A   + EM 
Sbjct: 725 WNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQ 784

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +G+KP+ + + T+  GL +   +  A  LF+  + NG   D+ +Y   I+GL  +   +
Sbjct: 785 KQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAM 844

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           EA ++F   R+  C    +   +L+D L K   LE A
Sbjct: 845 EAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 215/469 (45%), Gaps = 7/469 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +LG +  + F P   T   LI      +++ E   L   +R F   P    YTTL+  L 
Sbjct: 150 ILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALS 209

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
               + + L LF +M     E G   E +   +TT+I    +EG +D A  LL +MK   
Sbjct: 210 SVQESDIMLTLFHQMQ----ELGY--EVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNC 263

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +  ++V Y   I  F  A   + A + F E+   G+ P+ VT+  ++  LCK  ++DEA 
Sbjct: 264 LHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAV 323

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            + + M Q+   P A+ YNT++ G+   G+ + A  L    ++ GC  +V +Y+ ++   
Sbjct: 324 EIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCL 383

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K   +  AL  + EM  K   P++  +N L   L +  +VE AFK+ D M+  G+  + 
Sbjct: 384 GKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNV 442

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            T    ID LCK   + EA  +F  +    C  D   + SLIDGL K GR++ A  L+  
Sbjct: 443 MTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQ 502

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +     +PN V Y+ +I      G+ +    +F +M      P++   +  +    +  E
Sbjct: 503 MLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGE 562

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
             K   L  ++K    +PD    SI++  L K   +  +   F   ++Q
Sbjct: 563 TGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQ 611



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 162/347 (46%), Gaps = 7/347 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    G  +   I    F PD ++++ LI GL       E   LF  ++  GC  D   Y
Sbjct: 561 GETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAY 620

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T ++G C++     A  L EEM     +      P  VTY ++IDGL K   +D+A  L
Sbjct: 621 NTFIDGFCKSGKVNKAYQLLEEMKTKGRQ------PTVVTYGSVIDGLAKIDRLDEAYML 674

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + K   ++ NVV Y+S+I GF      +EA  +  E+M +G+ PNV T+N ++D L K
Sbjct: 675 FEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 734

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA      M      P+  TY+ L++G C   + N A   +  M+  G K    +
Sbjct: 735 AEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTIT 794

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I G  K   I  A SL+    + G  PD   +N +  GL    +   A+K+F+E +
Sbjct: 795 YTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETR 854

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR-ILKCEFDIRAY 347
             G    T T    +D L K+  + +A  +   LR I K +   R++
Sbjct: 855 MKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAKSQHAARSW 901



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 141/318 (44%), Gaps = 6/318 (1%)

Query: 147 AKDWNEAKRLFI---EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           AKD N+A   F       DQ + P    ++ ++  + KN K D   ++L  M   G  P 
Sbjct: 105 AKDVNQAISYFRWTERKTDQALCPEA--YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPS 162

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             T   L+     + ++    +L   M     +    +Y+ LI      +E +  L+L+ 
Sbjct: 163 TKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFH 222

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           +M   G +  V +  T+        +++ A  L DEM+ N + AD   Y   ID   K G
Sbjct: 223 QMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAG 282

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            +  A + FH ++      D   Y S+I  LCK  RL+ A+E+F  +     VP    Y+
Sbjct: 283 KVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYN 342

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            MI G  + G+ D+A  L    +    +P+VI ++ ++    +     + +    +MK+ 
Sbjct: 343 TMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK- 401

Query: 444 NVMPDASIVSIVVDLLAK 461
           +  P+ S  ++++D+L K
Sbjct: 402 DAAPNLSTYNVLIDMLCK 419



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   ++++  +++   TP+  T+  L+  L     I EA   F  ++     P+  T
Sbjct: 700 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHIT 759

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+NGLCR      A   ++EM           +PNT+TYTT+I GL K G + +A  
Sbjct: 760 YSILINGLCRVRKFNKAFVFWQEMQKQG------LKPNTITYTTMIAGLAKAGNIAEASS 813

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + K     P+  +Y ++I G  Y++   EA ++F E   +G   +  T   ++D L 
Sbjct: 814 LFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQ 873

Query: 181 KNGKMDEAS 189
           K+  +++A+
Sbjct: 874 KDECLEQAA 882


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 243/495 (49%), Gaps = 49/495 (9%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           + V G +  +  +PD  T+++LI+  C    +  A  +  ++R  GC  +V TY TL+ G
Sbjct: 228 WKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGG 287

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           LCR      A    +EM     ++G+V  P+  TY  II+GLCK G  D+AK LL +M  
Sbjct: 288 LCRAGAIEEAFGYKKEME----DYGLV--PDGFTYGAIINGLCKRGRPDQAKCLLDEMSC 341

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
             + PNVV Y+++I GF    + +EA ++  EM   GVQPN +T++ ++  LCK G+M  
Sbjct: 342 AGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGR 401

Query: 188 ASRLLDLMI--------------------QH---------------GVRPDAFTYNTLLD 212
           ASR+L  M                     QH               G+ P+ +TY+ +++
Sbjct: 402 ASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIIN 461

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK---- 268
           G C  G    A  L   M + G K   F Y+ LI+GYC+    EG+ SL  E L K    
Sbjct: 462 GLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCR----EGSFSLACETLKKMTRE 517

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
            + PD+  +N+L +GL  + +++ A + +DEM   G   + +TY   I G    G + +A
Sbjct: 518 NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKA 577

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            +L H +       +   Y  +++G  KS  LE      +S+    L+P+   Y I+I  
Sbjct: 578 EQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHN 637

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           L + G M  A  +   +E+N +VP+ + +  LI GF +  +  K + LL +M +  + P 
Sbjct: 638 LSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPG 697

Query: 449 ASIVSIVVDLLAKNE 463
            S  + ++D   K++
Sbjct: 698 ISCYNALIDGFCKSD 712



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 207/422 (49%), Gaps = 6/422 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     F ++  +  +   P+ +T+ +LI+GLC   R+  A+ +  ++   G   D  TY
Sbjct: 362 GNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTY 421

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ G  R  +   A  L  EM  G         PN  TY+ II+GLC+ G  ++A  L
Sbjct: 422 NLVIEGHLRQHNKEEAFLLLNEMRKGG------ISPNVYTYSIIINGLCQIGESERASGL 475

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM    +KPN   Y  +I G+C    ++ A     +M  + + P++  +N ++  L  
Sbjct: 476 LEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSN 535

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GKMDEA    D M++ G +P+ FTY  L+ G+ + G +  A++L   M + G     F 
Sbjct: 536 VGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFI 595

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++ GY K+  +E   S    ML KG+ PD  ++  +   L     ++ A  +   ++
Sbjct: 596 YAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIE 655

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +NG+  D+  Y + I G CK   + +AV L   +     E  I  YN+LIDG CKS  + 
Sbjct: 656 KNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDIS 715

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +F S+ C  L PN VTY+ +I G C  G +  A DL+ +M    V P+   + +L 
Sbjct: 716 HARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLA 775

Query: 422 RG 423
            G
Sbjct: 776 AG 777



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 219/441 (49%), Gaps = 10/441 (2%)

Query: 48  KLRVF----GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
           K+R F    G  PDV+TY+TL+   C+      A  + EEM     E G  C  N VTY 
Sbjct: 229 KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMR----ETG--CSLNVVTYN 282

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           T+I GLC+ G +++A     +M+D  + P+  TY ++I G C     ++AK L  EM   
Sbjct: 283 TLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCA 342

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G+ PNVV ++ ++D   + G  DEA +++  M   GV+P+  TY+ L+ G C  GR+  A
Sbjct: 343 GLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRA 402

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             +   M  +G      +Y+++I G+ +    E A  L +EM   GI P+V  ++ +  G
Sbjct: 403 SRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIING 462

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L +I + ERA  L ++M  +G+  + + Y   I G C+ G    A E    +       D
Sbjct: 463 LCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPD 522

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  YNSLI GL   G+++ A+E +  +      PN  TY  +I G    G ++KA  L  
Sbjct: 523 LYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLH 582

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            M  + + PN   +  ++ G+ + +   KV   L  M E  +MPD  +  IV+  L+ + 
Sbjct: 583 QMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSG 642

Query: 464 ISLNSLPSFTVHEQQEEVDES 484
               ++   +V E+   V +S
Sbjct: 643 HMQAAVSVLSVIEKNGLVPDS 663



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 221/473 (46%), Gaps = 41/473 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
             PD  T+ ++I GLC   R  +A  L  ++   G  P+V  Y+TL++G  R  +   A 
Sbjct: 309 LVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAF 368

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            + +EM+      GV  +PN +TY  +I GLCK G + +A  +L QM       + +TY 
Sbjct: 369 KIVKEMSAA----GV--QPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYN 422

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            VI G     +  EA  L  EM   G+ PNV T+++I++ LC+ G+ + AS LL+ MI  
Sbjct: 423 LVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIAD 482

Query: 199 GVRPDAFTYNTLLDGFC-------------------LT----------------GRVNHA 223
           G++P+AF Y  L+ G+C                   LT                G+++ A
Sbjct: 483 GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            E +  M   G +   F+Y  LI+GY     +E A  L  +ML+ G+ P+  I+  +  G
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            F+   +E+       M   G+  D   Y   I  L  +G++  AV +   +       D
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              Y SLI G CK+  +E A+ L   +    + P +  Y+ +I G C    +  AR++F 
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFN 722

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +    + PN +T+  LI G+ +  +    I+L ++M    V PDA + S++ 
Sbjct: 723 SIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLA 775



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 217/516 (42%), Gaps = 97/516 (18%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRT 71
           R+  S   PDA  F  L   LCA     +A  L  ++ R +   P V +          +
Sbjct: 112 RLAPSAPAPDA--FAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLS----------S 159

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD---- 127
            H  ++        +  G   VV +        ++D   K G V    E++L MKD    
Sbjct: 160 VHRALS-------GSDQGRRPVVLD-------VLVDTYKKTGRVRDGAEVVLLMKDLGLA 205

Query: 128 -------------------------------KNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
                                            I P+V TY+++I  +C  +D   AK++
Sbjct: 206 PSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKV 265

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             EM + G   NVVT+N ++  LC+ G ++EA      M  +G+ PD FTY  +++G C 
Sbjct: 266 VEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCK 325

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR + AK L   M   G    V  YS LI+G+ +    + A  +  EM + G++P+ + 
Sbjct: 326 RGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKIT 385

Query: 277 HNTLFVGLFEI-----------------------------------HQVERAFKLFDEMQ 301
           ++ L  GL ++                                   H  E AF L +EM+
Sbjct: 386 YDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMR 445

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G++ + +TY   I+GLC+ G    A  L   +     + +   Y  LI G C+ G   
Sbjct: 446 KGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFS 505

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A E  + +    L P++  Y+ +I GL N G+MD+A + + +M E    PN  T+  LI
Sbjct: 506 LACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLI 565

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            G+       K  +LLH+M    + P+  I + +++
Sbjct: 566 HGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILE 601



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 183/381 (48%), Gaps = 37/381 (9%)

Query: 2   GRVSHGFVVLG----------RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV 51
           G + HG+ + G          ++L S   P+   +  +++G      + + ++    +  
Sbjct: 562 GGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLE 621

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
            G  PD   Y  +++ L  + H   A+++   +       G+V  P+++ Y ++I G CK
Sbjct: 622 KGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKN----GLV--PDSLIYGSLISGFCK 675

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
              ++KA  LL +M  K I+P +  Y ++I GFC + D + A+ +F  ++ +G+ PN VT
Sbjct: 676 AADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVT 735

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  ++D  CK G + +A  L + M+  GV PDAF Y+ L  G   +G +  A  LF++ E
Sbjct: 736 YTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQA--LFITEE 793

Query: 232 SMGCKHTVFS-YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            +   + + S ++ L++G+CK  +++  +     M+ K I P ++    + +GL E  ++
Sbjct: 794 MIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKL 853

Query: 291 ERAFKLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
             A  +F E+ Q+N    DT    +    +   G +   +++ H               +
Sbjct: 854 SEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLV--PLDVIH---------------N 896

Query: 350 LIDGLCKSGRLEIALELFRSL 370
           +I   CK G L+ AL L  +L
Sbjct: 897 MIQSHCKQGYLDKALMLHDAL 917



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 6/175 (3%)

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
           +  V RA    D+ +R  V          +D   K G + +  E+   ++ L     +R 
Sbjct: 157 LSSVHRALSGSDQGRRPVV------LDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRC 210

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
            N L+  L ++  L++  ++   +    + P+V TYS +I   C    ++ A+ +  +M 
Sbjct: 211 CNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMR 270

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           E     NV+T++ LI G  R     +      +M++  ++PD      +++ L K
Sbjct: 271 ETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCK 325


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 142/441 (32%), Positives = 241/441 (54%), Gaps = 7/441 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+  +I  +C E  ++ A +LF +++  G  PD+ TY +L++G  +      +  LFEEM
Sbjct: 254 TYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEM 313

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            +      V CEP+ +TY  +I+  CK   + KA   L +MK+  +KPNVVTY+++I   
Sbjct: 314 KD------VGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDAL 367

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C      +A +  ++M   G+ PN  T+  ++D  CK G + +A +L D M+Q  V  + 
Sbjct: 368 CKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNV 427

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY TLLDG C  GR+  A++LF +M   G    + +Y+ L++G+ KNK +E AL L  E
Sbjct: 428 VTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKE 487

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           +  K IKPD++++ T+  GL   +++E    +  EM+  G+ A++  Y   +D   K G 
Sbjct: 488 IKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGK 547

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP-NVVTYS 383
            VEA+ L   +  L  E  I  +  LIDGLCK G +E A++ F  +    L P NV   +
Sbjct: 548 TVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCT 607

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I GLC +  ++ A+ LF +M++  +VP+ I +  LI G ++  +  + + +  +M E+
Sbjct: 608 ALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSEL 667

Query: 444 NVMPDASIVSIVVDLLAKNEI 464
            +  D    + +V  L++  +
Sbjct: 668 GMELDLHAYTSLVWGLSQGNL 688



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 219/434 (50%), Gaps = 15/434 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TPD VT+ SLI G      + E+  LF +++  GCEPDV TY  L+N  C+      A +
Sbjct: 284 TPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFH 343

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
              EM N         +PN VTY+T+ID LCKE  + +A + LL M+   + PN  TYTS
Sbjct: 344 FLHEMKNSG------LKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTS 397

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C A   ++A +L  EM+   V  NVVT+  ++D LCK G+M EA  L   MI+ G
Sbjct: 398 LIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAG 457

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V P+  TY  L+ G     RV +A EL   ++    K  +  Y  +I G C   ++E   
Sbjct: 458 VTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECE 517

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + SEM + GI+ + VI+       F+  +   A  L  EM   GV     T+   IDGL
Sbjct: 518 FVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGL 577

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYN-----SLIDGLCKSGRLEIALELFRSLPCGV 374
           CK G + EA++ F  +     +F+++  N     +LIDGLCK+  +E A +LF  +    
Sbjct: 578 CKKGLVEEAIDYFARM----ADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKN 633

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           +VP+ + Y+ +I G        +A ++   M E  +  ++  +  L+ G  + N   +  
Sbjct: 634 MVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQAR 693

Query: 435 ELLHKMKEINVMPD 448
             L++M    ++PD
Sbjct: 694 MFLNEMIGKGIVPD 707



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 206/376 (54%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           VC P    +  +     + G +++A +   +M    + P   +  + +         + +
Sbjct: 177 VCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLS 236

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            + F +M+  G+  +V T+N+++  +CK G M  A  L   M Q G+ PD  TYN+L+DG
Sbjct: 237 NKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDG 296

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +   G ++ +  LF  M+ +GC+  V +Y+ LIN +CK +++  A     EM + G+KP+
Sbjct: 297 YGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPN 356

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VV ++TL   L + H +++A K   +M+R G++ + +TY + ID  CK GY+ +A++L  
Sbjct: 357 VVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLAD 416

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +  ++  F++  Y +L+DGLCK GR+  A +LFR++    + PN+ TY+ ++ G   + 
Sbjct: 417 EMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK 476

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           +++ A +L  +++E  + P+++ +  +I G    N+  +   ++ +MK   +  ++ I +
Sbjct: 477 RVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYT 536

Query: 454 IVVDLLAKNEISLNSL 469
           I +D   K   ++ +L
Sbjct: 537 IRMDAYFKTGKTVEAL 552



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 202/400 (50%), Gaps = 7/400 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++   F  L  +  S   P+ VT+++LI  LC E  + +A      +R  G  P+ FTYT
Sbjct: 337 QMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYT 396

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++  C+  +   AL L +EM      F      N VTYTT++DGLCKEG + +A++L 
Sbjct: 397 SLIDANCKAGYLSDALKLADEMLQVQVGF------NVVTYTTLLDGLCKEGRMMEAEDLF 450

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M    + PN+ TYT+++ G    K    A  L  E+ ++ ++P+++ +  I+  LC  
Sbjct: 451 RAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQ 510

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K++E   ++  M   G+R ++  Y   +D +  TG+   A  L   M  +G + T+ ++
Sbjct: 511 NKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTF 570

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKP-DVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            +LI+G CK   +E A+  ++ M    ++P +V +   L  GL + + +E A KLFDEMQ
Sbjct: 571 CVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQ 630

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +  D   Y   IDG  K+    EA+ +   +  L  E D+ AY SL+ GL +   ++
Sbjct: 631 DKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQ 690

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            A      +    +VP+ +    ++      G +D+A +L
Sbjct: 691 QARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIEL 730



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 213/443 (48%), Gaps = 25/443 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T+ +LI   C   ++ +A     +++  G +P+V TY+TL++ LC+      A+  
Sbjct: 320 PDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKF 379

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M        V   PN  TYT++ID  CK G++  A +L  +M    +  NVVTYT++
Sbjct: 380 LLDMRR------VGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTL 433

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C      EA+ LF  M+  GV PN+ T+  ++    KN +++ A  LL  + +  +
Sbjct: 434 LDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKI 493

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD   Y T++ G C   ++   + +   M++ G +     Y+I ++ Y K  +   AL+
Sbjct: 494 KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALN 553

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-----QRNGVAADTWTYRTF 315
           L  EM   G++  +V    L  GL +   VE A   F  M     Q N VA  T      
Sbjct: 554 LLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCT----AL 609

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           IDGLCKN YI  A +LF  ++      D  AY +LIDG  K    + AL +   +    +
Sbjct: 610 IDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGM 669

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI- 434
             ++  Y+ ++ GL     + +AR    +M    +VP+ I    L+R +  +    + I 
Sbjct: 670 ELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIE 729

Query: 435 ---ELLHK------MKEINVMPD 448
              ELL K      ++E N+MP+
Sbjct: 730 LHDELLKKVPLDELLEEQNLMPE 752


>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
          Length = 462

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 227/440 (51%), Gaps = 28/440 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  ++T ++ G   +  +++   LF  +   G  PD++T+  L+           A+ +
Sbjct: 27  PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMII 86

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM     + GV  +P+ VTY T+I  LC+ G +D A E   QM D+ + P+   Y  +
Sbjct: 87  FNEMR----DHGV--KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 140

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I+GFC      +AK L  E+M+ G++ ++V F  I++ LCK G++ +A  + DL +  G+
Sbjct: 141 IQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL 200

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PDA  YN L+DG+CL G++  A  +F +M S G +  V                     
Sbjct: 201 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV-------------------- 240

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
              EML KGIKP  +++N +  GLFE  +   A   F EM  +G+A +  TY   + GL 
Sbjct: 241 --GEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLF 298

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           KN    EA+ LF  LR +  + DI   N++I G+ ++ R+E A +LF S+    LVP  V
Sbjct: 299 KNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAV 358

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TYSIMI  L  +G +++A D+F  M+     P+    + ++R  ++ NE  +    L K+
Sbjct: 359 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 418

Query: 441 KEINVMPDASIVSIVVDLLA 460
            E N   +     ++VDL +
Sbjct: 419 DERNFSLEHLTAMLLVDLFS 438



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 148/303 (48%), Gaps = 17/303 (5%)

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           M  LCK GK+ E   + D M   G  PD F+Y  +L+G+   G +    +LF  M   G 
Sbjct: 1   MGSLCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 60

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              ++++++LI  Y     ++ A+ +++EM   G+KP VV + T+   L  I +++ A +
Sbjct: 61  APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 120

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
            F++M   GV  D + Y   I G C +G +++A EL   +       DI  + S+I+ LC
Sbjct: 121 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 180

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV- 414
           K GR+  A  +F       L P+ V Y++++ G C  G+M+KA  +F  M    + PNV 
Sbjct: 181 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 240

Query: 415 ------------ITFDMLIRGFIRINE--PSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
                       I ++++I G        P+KV    H+M E  +  +    SIV+  L 
Sbjct: 241 GEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV--KFHEMTESGIAMNKCTYSIVLRGLF 298

Query: 461 KNE 463
           KN 
Sbjct: 299 KNR 301



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 153/345 (44%), Gaps = 19/345 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++        +++     PD   +  LI+G C    +++A  L +++   G   D+  
Sbjct: 112 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 171

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA-- 118
           + +++N LC+    + A N+F+   N      V   P+ V Y  ++DG C  G ++KA  
Sbjct: 172 FGSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYNMLMDGYCLVGKMEKALR 225

Query: 119 -----------KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
                        ++ +M  K IKP+ + Y  +I G   A     AK  F EM + G+  
Sbjct: 226 VFDAMVSAGIEPNVVGEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 285

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N  T+++++  L KN   DEA  L   +    V+ D  T NT++ G   T RV  AK+LF
Sbjct: 286 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 345

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
            S+   G      +YSI+I    K   +E A  ++S M + G +PD  + N +   L + 
Sbjct: 346 ASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 405

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +++ RA     ++     + +  T    +D     G   E +   
Sbjct: 406 NEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 450


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 216/384 (56%), Gaps = 3/384 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ V+Y+T+I+G C  G + K  +L+ +M+ K +KPN+ TY S+I   C +   ++A+R+
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             EM++QG+ P+ V +  ++D  CK G +  A +L D M +  + PD   Y  ++ G C 
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G++  A ++F  M S G +    +Y+ LI+GYCK+ E+E A SL+++M+  G+ P+VV 
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +  L  GL ++ QV+ A +L  EM   G+  +  TY + ++GLCK+G I +AV+L   + 
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
           +     D   + +L+D  CK+G +  A EL R +    L P V+T+++++ G C  G ++
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
               L   M E  ++PN  T++ L++ +   N      E+   M    VMPD++  +I++
Sbjct: 308 DGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILI 367

Query: 457 DLLAKNEISLNSLPSFTVHEQQEE 480
               K   + N   ++ +H++  E
Sbjct: 368 KGHCK---ARNMKEAWFLHKEMAE 388



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 232/439 (52%), Gaps = 6/439 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD V+++++I G C    + +   L  ++++ G +P+++TY +++  LC++     A  
Sbjct: 7   APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  EM N     G+V  P+TV YTT+IDG CK G +  A +L  +M+ + I P+ + YT+
Sbjct: 67  VLREMINQ----GIV--PDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           VI G C      EA ++F +M  +GV+P+ VT+  ++D  CK+G+M++A  L + M+Q G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+  TY  L DG C  G+V+ A EL   M   G +  + +Y+ L+NG CK+  I  A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  EM   G+ PD +   TL     +  ++ +A +L  EM   G+     T+   ++G 
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C +G + +   L   +       +   YNSL+   C    +    E+++ +    ++P+ 
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+I+I G C    M +A  L  +M E        +++ +I+GF +  + S+  EL  +
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEE 420

Query: 440 MKEINVMPDASIVSIVVDL 458
           M+   +  DA I ++ VD+
Sbjct: 421 MRREGMAADAEIYNLFVDI 439



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 114/326 (34%), Positives = 189/326 (57%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           MK +   P+VV+Y++VI G+C   +  +  +L  EM  +G++PN+ T+N I+  LCK+GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A R+L  MI  G+ PD   Y TL+DGFC  G +  A +LF  ME         +Y+ 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I G C+  ++  A  ++++M S+G++PD V + TL  G  +  ++E+AF L ++M ++G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  +  TY    DGLCK G +  A EL H +     + +I  YNSL++GLCKSG +  A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +L   +    + P+ +T++ ++   C  G+M KA +L  +M +  + P VITF++L+ GF
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 425 IRINEPSKVIELLHKMKEINVMPDAS 450
                      LL  M E  +MP+ +
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTT 326



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 206/394 (52%), Gaps = 6/394 (1%)

Query: 49  LRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG 108
           ++  G  PDV +Y+T++NG C        L L +EM           +PN  TY +II  
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKG------LKPNLYTYNSIILL 54

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           LCK G VD A+ +L +M ++ I P+ V YT++I GFC   +   A +LF EM  Q + P+
Sbjct: 55  LCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPD 114

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
            + +  ++  LC+ GKM EA ++ + M   GV PD  TY TL+DG+C +G +  A  L  
Sbjct: 115 FIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHN 174

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M   G    V +Y+ L +G CK  +++ A  L  EM  KG++ ++  +N+L  GL +  
Sbjct: 175 QMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSG 234

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            + +A KL +EM+  G+  DT T+ T +D  CK G +V+A EL   +     +  +  +N
Sbjct: 235 NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFN 294

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            L++G C SG LE    L   +    ++PN  TY+ ++   C    M    +++  M   
Sbjct: 295 VLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
            V+P+  T+++LI+G  +     +   L  +M E
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAE 388



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   + +   + K    PD + +T++I GLC   ++MEA  +F K+   G EPD  T
Sbjct: 93  LGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVT 152

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL++G C++     A +L  +M     + G+   PN VTYT + DGLCK G VD A E
Sbjct: 153 YTTLIDGYCKSGEMEKAFSLHNQMV----QSGLT--PNVVTYTALADGLCKLGQVDTANE 206

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  K ++ N+ TY S++ G C + +  +A +L  EM   G+ P+ +TF  +MD  C
Sbjct: 207 LLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYC 266

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M +A  LL  M+  G++P   T+N L++GFC++G +   + L   M   G      
Sbjct: 267 KTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTT 326

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+  YC    +     +Y  M ++G+ PD   +N L  G  +   ++ A+ L  EM
Sbjct: 327 TYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 386

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G      +Y + I G  K   I EA ELF  +R      D   YN  +D     G +
Sbjct: 387 AEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNM 446

Query: 361 EIALEL 366
           E ALEL
Sbjct: 447 ETALEL 452



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/413 (31%), Positives = 207/413 (50%), Gaps = 6/413 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     VL  ++     PD V +T+LI G C    I  A  LF ++      PD   Y
Sbjct: 59  GKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAY 118

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++ GLCR    + A  +F +M      F    EP+ VTYTT+IDG CK G ++KA  L
Sbjct: 119 TAVICGLCRCGKMMEADKVFNKM------FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSL 172

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM    + PNVVTYT++  G C     + A  L  EM  +G+Q N+ T+N +++ LCK
Sbjct: 173 HNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCK 232

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G + +A +L++ M   G+ PD  T+ TL+D +C TG +  A EL   M   G + TV +
Sbjct: 233 SGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVIT 292

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++L+NG+C +  +E    L + ML KGI P+   +N+L       + +    +++  M 
Sbjct: 293 FNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMC 352

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  D+ TY   I G CK   + EA  L   +          +YNS+I G  K  ++ 
Sbjct: 353 ARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKIS 412

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            A ELF  +    +  +   Y++ +     +G M+ A +L  +  EN  +  +
Sbjct: 413 EARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIENCFLNRI 465



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 3/178 (1%)

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+  G A D  +Y T I+G C  G + + ++L   +++   + ++  YNS+I  LCKSG+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A  + R +    +VP+ V Y+ +I G C  G +  A  LF +ME+  +VP+ I +  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           +I G  R  +  +  ++ +KM    V PD    + ++D   K   S     +F++H Q
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCK---SGEMEKAFSLHNQ 175


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 248/527 (47%), Gaps = 93/527 (17%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+    F ++  +++  F PD  T++ +I  LC   ++ +A  LF +++  G  PDV+T
Sbjct: 433 MGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYT 492

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++  C+      A + F+EM +      V C P+ VTYT ++    K   V +A +
Sbjct: 493 YTILIDSFCKVGLIEQARSWFDEMES------VGCSPSVVTYTALLHAYLKTKQVPQASD 546

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD----------------QG 164
           +  +M D    PN +TY++++ G C A +  +A  ++ +M+                   
Sbjct: 547 IFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDS 606

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + PNVVT+  ++D LCK  K+ +A  LLD+M  +G  P+   Y+ L+DGFC  G++++A+
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQ 666

Query: 225 ELFVSMESMG-----------------------------------CKHTVFSYSILINGY 249
           E+F  M   G                                   C   V +Y+ +I+G 
Sbjct: 667 EVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGL 726

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+  E + AL L S M  +G  P+VV + +L  GL +  +V+ + +LF +M   G A + 
Sbjct: 727 CRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNY 786

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS-------------------- 349
            TYR  I+  C  G + EA  L   ++       ++ Y S                    
Sbjct: 787 VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELE 846

Query: 350 -------------LIDGLCKSGRLEIALELFRSL---PCGVLVPNVVTYSIMIGGLCNDG 393
                        LID   K+GRLE ALEL + +      + + +  TY+ +I  LC   
Sbjct: 847 SHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLAS 906

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           Q++KA +L+ ++    VVP +  F  LI+G I++N+ ++ ++L + M
Sbjct: 907 QLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSM 953



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 233/480 (48%), Gaps = 31/480 (6%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC  P+ VT+ +L+ G   + ++     + + +   GC P+   + +LV+  C       
Sbjct: 304 SCI-PNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPY 362

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK------EGFVDKAKELLLQMKDKNI 130
           A  L   MA      G  C P  V Y   I  +C          +  A+++  +M   + 
Sbjct: 363 AYKLLNRMA------GCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSC 416

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
             N V   +  R  C    +++A ++   MM +G  P+  T++ ++  LC+  K+++A  
Sbjct: 417 VLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFL 476

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M   GV PD +TY  L+D FC  G +  A+  F  MES+GC  +V +Y+ L++ Y 
Sbjct: 477 LFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYL 536

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM---------- 300
           K K++  A  ++  M+  G  P+ + ++ L  GL +  + ++A +++ +M          
Sbjct: 537 KTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSD 596

Query: 301 ------QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                   + +A +  TY   IDGLCK   +V+A EL   +    CE +   Y++LIDG 
Sbjct: 597 FYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGF 656

Query: 355 CKSGRLEIALEL-FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           CK G+L+ A E+ FR   CG L P V TY+ +I  +  D ++D A  +   M E++  PN
Sbjct: 657 CKVGKLDNAQEVFFRMSKCGYL-PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPN 715

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           V+T+  +I G  RI E  K ++LL  M++    P+    + ++D L K+     SL  FT
Sbjct: 716 VVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFT 775



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 205/500 (41%), Gaps = 59/500 (11%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VLGR+L             +++  C      +A     +L+ FG  P   TY  LV  L 
Sbjct: 170 VLGRLL-----------NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLA 218

Query: 70  RTSHTIVALNLFEEMAN---GNGEFGVVC-----------------------EPNTVTYT 103
                 +   + +EM+       +F V C                       + +TV  T
Sbjct: 219 TAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCT 278

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
            +I GL +    D+A   L +M+  +  PNVVTY +++ GF   K     KR+   MM++
Sbjct: 279 QMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNE 338

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH- 222
           G  PN   FN ++   C       A +LL+ M   G  P    YN  +   C    +   
Sbjct: 339 GCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSP 398

Query: 223 -----AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
                A++++  M +  C     + +      C   + + A  +   M+ KG  PD   +
Sbjct: 399 DLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTY 458

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           + +   L E  +VE+AF LF EM+  GV  D +TY   ID  CK G I +A   F  +  
Sbjct: 459 SKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMES 518

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
           + C   +  Y +L+    K+ ++  A ++F  +      PN +TYS ++ GLC  G+  K
Sbjct: 519 VGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQK 578

Query: 398 ARDLFLDM----------------EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           A +++  M                  +++ PNV+T+  LI G  + ++     ELL  M 
Sbjct: 579 ACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMS 638

Query: 442 EINVMPDASIVSIVVDLLAK 461
                P+  I   ++D   K
Sbjct: 639 SNGCEPNHIIYDALIDGFCK 658



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 154/334 (46%), Gaps = 45/334 (13%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ + + +LI G C   ++  A  +F ++   G  P V TYT+L++ + +     +A+ +
Sbjct: 644 PNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKV 703

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M   +      C PN VTYT +IDGLC+ G   KA +LL  M+ +   PNVVTYTS+
Sbjct: 704 LSQMLESS------CTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSL 757

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ--- 197
           I G   +   + + +LF +M+ QG  PN VT+ V+++  C  G +DEA  LL  M Q   
Sbjct: 758 IDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYW 817

Query: 198 ------------------------------HGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
                                         HG+   A  Y  L+D F   GR+  A EL 
Sbjct: 818 PKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELH 877

Query: 228 VSMESMGCKHTVFS---YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
             M  +     + S   Y+ LI   C   ++E A  LYSE+  KG+ P++     L  GL
Sbjct: 878 KEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGL 937

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            ++++   A +L   M   GV    W      DG
Sbjct: 938 IKVNKWNEALQLCYSMCDEGV---NWQSNNSFDG 968



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 106/249 (42%), Gaps = 45/249 (18%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G       +L  + K    P+ VT+TSLI GL    ++  +  LFT++   GC P+  T
Sbjct: 729 IGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVT 788

Query: 61  YTTLVN-----GLCRTSHT----------------------------IVALNLFEEMANG 87
           Y  L+N     GL   +H+                            I +L L EE+ + 
Sbjct: 789 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELES- 847

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV---TYTSVIRGF 144
           +G   +        Y  +ID   K G ++KA EL  +M + +   N+    TYTS+I+  
Sbjct: 848 HGMVSI-----APVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQAL 902

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A    +A  L+ E+  +GV P +  F  ++  L K  K +EA +L   M   GV    
Sbjct: 903 CLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGVN--- 959

Query: 205 FTYNTLLDG 213
           +  N   DG
Sbjct: 960 WQSNNSFDG 968



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 7/241 (2%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++++   C++     AL     +   G +P    +N L   L    Q++  F++  EM  
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G   D +T   F   LCK G   +A+ +         + D      +I GL ++   + 
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDF---KLDTVLCTQMISGLMEASLFDE 292

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+     + C   +PNVVTY  ++ G     Q+   + +   M      PN   F+ L+ 
Sbjct: 293 AISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVH 352

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
            +    +     +LL++M      P   + +I +  +   E     LPS  +    E+V 
Sbjct: 353 SYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGE----ELPSPDLLALAEKVY 408

Query: 483 E 483
           E
Sbjct: 409 E 409


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 237/485 (48%), Gaps = 42/485 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V  ++ ++   PD  T   + K  C    ++ A     ++   G E ++  Y
Sbjct: 222 GDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAY 281

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NG C    T  A  + + +  G G       PN VTYT ++ G C E  +++A+ +
Sbjct: 282 HAVMNGYCEVGQTNDARRMLDSLP-GRG-----FSPNIVTYTLLVKGYCNEKNMEEAEGV 335

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           + ++ K+K +  +   + +VI G+C      +A RL  EM+D  +Q N+  +N++++  C
Sbjct: 336 VQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYC 395

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M EA  +L  M   GVRPD ++YN+L+DG+C  G +N A E + +M   G   T  
Sbjct: 396 KLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTL 455

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+ G+C    I+ AL L+  ML KGI P+ +  +TL  G F+  + E+A  L+ E 
Sbjct: 456 TYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKET 515

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+A +T T+ T I+GLCK   + EA EL   ++  +C  DI  Y +L  G CK G +
Sbjct: 516 LARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDM 575

Query: 361 EIA---------------LELFRSLPCGVLV--------------------PNVVTYSIM 385
           + A               +E F SL  G  +                    PN V Y  +
Sbjct: 576 DRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGAL 635

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G C +G +  A +L+L+M E  +VPN+     L+  F R  +  +   +L  +   ++
Sbjct: 636 IAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDM 695

Query: 446 MPDAS 450
           +PD S
Sbjct: 696 IPDIS 700



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 234/474 (49%), Gaps = 34/474 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++  F     +L++ F    +T+ +L+KG C+   I +A  L+  +   G  P+  + 
Sbjct: 433 GLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISC 492

Query: 62  TTLVNGLCRTSHTIVALNLFEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +TL++G  ++  T  ALNL++E +A G  +       NT T+ T+I+GLCK   + +A+E
Sbjct: 493 STLLDGFFKSGKTEKALNLWKETLARGLAK-------NTTTFNTVINGLCKIERMPEAEE 545

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+ +MK     P+++TY ++  G+C   D + A R+  E+ + G  P +  FN ++    
Sbjct: 546 LVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHF 605

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
              +  + + +L  M   G+ P+   Y  L+ G+C  G ++ A  L++ M   G    +F
Sbjct: 606 IAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLF 665

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV-------------------------- 274
             S L++ + +  + + A  +   ++   + PD+                          
Sbjct: 666 ICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAK 725

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           ++ N +  GL ++ ++E A  L  +++  G  AD +TY + I G   +G++  A +L  T
Sbjct: 726 IMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDT 785

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +  +    +I  YNSLI GLCKSG L  A+ LF+ L    + PN +TY+ +I   C DG 
Sbjct: 786 MLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGY 845

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           + +A  L   M E  + P V T+ +LI G        + I+LL +M E NV P+
Sbjct: 846 ITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPN 899



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 231/520 (44%), Gaps = 67/520 (12%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+     +L  ++ S    +   +  +I G C   R++EA  +  ++   G  PD ++
Sbjct: 362 MGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYS 421

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +LV+G C+      A   +  M   NG F       T+TY  ++ G C  G +D A  
Sbjct: 422 YNSLVDGYCKKGLMNKAFETYNTMLR-NG-FAAT----TLTYNALLKGFCSLGSIDDALR 475

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M  K I PN ++ ++++ GF  +    +A  L+ E + +G+  N  TFN +++ LC
Sbjct: 476 LWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLC 535

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV- 239
           K  +M EA  L+D M Q    PD  TY TL  G+C  G ++ A  +   +E++G   T+ 
Sbjct: 536 KIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIE 595

Query: 240 ----------------------------------FSYSILINGYCKNKEIEGALSLYSEM 265
                                              +Y  LI G+CK  ++  A +LY EM
Sbjct: 596 FFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEM 655

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR-------TFID- 317
           + KG+ P++ I ++L    +   + + A  +   +    +  D    R        FID 
Sbjct: 656 IEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDT 715

Query: 318 ------------------GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
                             GLCK G I +A  L   L+      D   Y+SLI G   SG 
Sbjct: 716 VAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGF 775

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +++A +L  ++    L PN+VTY+ +I GLC  G++ +A  LF  +    + PN IT++ 
Sbjct: 776 VDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNT 835

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           LI    +    ++  +L  +M E  + P     SI+++ L
Sbjct: 836 LIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGL 875



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 194/424 (45%), Gaps = 42/424 (9%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           ++  L+  L        AL +F+EM        + C  +  +  +I++ L + G +    
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRT------LGCRLSMRSCNSILNRLAQTGDLGATV 228

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  QM+     P+  T   + + +C  K    A     EM   GV+ N+V ++ +M+  
Sbjct: 229 AVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGY 288

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTL----------------------------- 210
           C+ G+ ++A R+LD +   G  P+  TY  L                             
Sbjct: 289 CEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVD 348

Query: 211 -------LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
                  ++G+C  GR+  A  L   M     +  +F Y+I+INGYCK   +  A ++  
Sbjct: 349 EAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILH 408

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM   G++PD   +N+L  G  +   + +AF+ ++ M RNG AA T TY   + G C  G
Sbjct: 409 EMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLG 468

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            I +A+ L+  +       +  + ++L+DG  KSG+ E AL L++      L  N  T++
Sbjct: 469 SIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFN 528

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I GLC   +M +A +L   M++    P++IT+  L  G+ +I +  +   +L++++ +
Sbjct: 529 TVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENL 588

Query: 444 NVMP 447
              P
Sbjct: 589 GFAP 592



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 175/367 (47%), Gaps = 1/367 (0%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           +  ++  ++  L   G +D A ++  +M+    + ++ +  S++       D      +F
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M   G  P+  T  ++    CK   +  A   ++ M + GV  +   Y+ +++G+C  
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVI 276
           G+ N A+ +  S+   G    + +Y++L+ GYC  K +E A  +  E+  +K +  D  +
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
              +  G  ++ ++E A +L +EM  + +  + + Y   I+G CK G +VEA  + H + 
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
            +    D  +YNSL+DG CK G +  A E + ++         +TY+ ++ G C+ G +D
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L+  M +  + PN I+   L+ GF +  +  K + L  +     +  + +  + V+
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531

Query: 457 DLLAKNE 463
           + L K E
Sbjct: 532 NGLCKIE 538



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 150/316 (47%), Gaps = 22/316 (6%)

Query: 6   HGFV--VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           HG V  +L  +     +P+ V + +LI G C E  +  A  L+ ++   G  P++F  ++
Sbjct: 610 HGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSS 669

Query: 64  LVNGLCRTS---------HTIVALNLFEEMANGNGEFGVVC-----------EPNTVTYT 103
           LV+   R             +V  ++  +++    E G V                + + 
Sbjct: 670 LVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWN 729

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
            +I GLCK G ++ AK LL  +KDK    +  TY+S+I G   +   + A  L   M+  
Sbjct: 730 IVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSV 789

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G+ PN+VT+N ++  LCK+G++  A  L   +   G+ P+A TYNTL+D  C  G +  A
Sbjct: 790 GLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEA 849

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            +L   M   G   TVF+YSILING C    +E A+ L  +M+   + P+ V + TL  G
Sbjct: 850 FKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQG 909

Query: 284 LFEIHQVERAFKLFDE 299
                 V+      D+
Sbjct: 910 YVRCESVDVPIMPLDQ 925



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 161/410 (39%), Gaps = 90/410 (21%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +    L      +  TF ++I GLC   R+ EA  L  K++ + C PD+ TY
Sbjct: 503 GKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITY 562

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANG-------------NGEF-----GVVCE------- 96
            TL +G C+      A  +  E+ N               G F     G V +       
Sbjct: 563 RTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSN 622

Query: 97  ----PNTVTYTTIIDGLCKE-----------------------------------GFVDK 117
               PNTV Y  +I G CKE                                   G  D+
Sbjct: 623 RGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDE 682

Query: 118 AKELLLQMKDKNIKPNV--------------------------VTYTSVIRGFCYAKDWN 151
           A  +L  +   ++ P++                          + +  VI G C      
Sbjct: 683 ANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIE 742

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +AK L  ++ D+G   +  T++ ++     +G +D A  L D M+  G+ P+  TYN+L+
Sbjct: 743 DAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLI 802

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C +G ++ A  LF  + + G      +Y+ LI+ +CK+  I  A  L   M+ +GI 
Sbjct: 803 YGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIH 862

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           P V  ++ L  GL     +E A KL D+M  N V  +  TY T I G  +
Sbjct: 863 PTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 240/456 (52%), Gaps = 14/456 (3%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI-VA 77
           + P+ + F    + L     + EA  L  KL  +G    V +    ++ +   S  I +A
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMA 245

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           + +F        E+G+    NT +Y  II  LC+ G V +A  LL+QM  ++  P+VV+Y
Sbjct: 246 IKVF-------CEYGISW--NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSY 296

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           ++VI G+C+  +  +A +L  +M  +G++PN  T+N I+  LCK GK  EA ++L  M+ 
Sbjct: 297 STVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS 356

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
             + PD   Y TL+ GF   G V  A + F  M S        +Y+ LI G+ +  ++  
Sbjct: 357 QKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
             +L+ EM+S+G+KPD V + TL     +  ++  AF L +EM + G+  +  TY   ID
Sbjct: 417 PQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLCK+G +  A EL   +R    + ++  YNS+++G+CK+G +E A++L + +    + P
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + +TY+ +I   C  G +DKA  L  +M +  + P V+TF++L+ GF  +        LL
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
             M E  ++PDA    I  + L K     NS+ + T
Sbjct: 597 GWMLEKGIVPDA----ITYNTLMKQHCIRNSMNTTT 628



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 236/470 (50%), Gaps = 9/470 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L ++     TPD V+++++I G C    + +A  L   +++ G +P+ +T
Sbjct: 271 LGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYT 330

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +++  LC+   +  A  +  EM +          P+ V YTT+I G  K G V  A +
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQK------IIPDNVVYTTLIHGFFKLGHVRTANK 384

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M  K I P+ +TYT++I+GF       E + LF EM+ +G++P+ VT+  ++D  C
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M  A  L + M+Q G+ P+  TY  L+DG C  G ++ A EL   M   G +  V 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ ++NG CK   IE A+ L  EM   GI PD + + T+      +  +++A KL  EM
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     T+   ++G C  G + +   L   +       D   YN+L+   C    +
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
               ++++ +    + P+  TY+I+I G C    + +A  L+ +M E   VP V +++ L
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN---EISLN 467
           I+ F +  +  +  EL  +M+   ++ D  I +  VD+  +    EI+LN
Sbjct: 685 IKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLN 734



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 215/405 (53%), Gaps = 6/405 (1%)

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
           +G   +  +Y  ++  LCR      A  L  +M   +        P+ V+Y+T+IDG C 
Sbjct: 252 YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST------PDVVSYSTVIDGYCH 305

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G + KA +L+  M+ K +KPN  TY S+I   C      EA+++  EMM Q + P+ V 
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  ++    K G +  A++  D M+   + PD  TY TL+ GF   G+V   + LF  M 
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           S G K    +Y+ LI+ YCK  E+  A SL++EM+  G+ P++V +  L  GL +  +++
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +L DEM++ G+  +   Y + ++G+CK G I +A++L   + +   + D   Y ++I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           D  C+ G ++ A +L + +    L P VVT+++++ G C  G ++    L   M E  +V
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           P+ IT++ L++     N  +   ++  +M+   V PD++  +I++
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 223/451 (49%), Gaps = 6/451 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           +  ++  +I  LC   ++ EA  L  ++      PDV +Y+T+++G C       AL L 
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           ++M           +PN  TY +II  LCK G   +A+++L +M  + I P+ V YT++I
Sbjct: 317 DDMQIKG------LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GF        A + F EM+ + + P+ +T+  ++    + GK+ E   L   MI  G++
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY TL+D +C  G + +A  L   M  MG    + +Y  LI+G CK+ E++ A  L
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM  KG++ +V I+N++  G+ +   +E+A KL  EM+  G+  D  TY T ID  C+
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G I +A +L   +     +  +  +N L++G C  G LE    L   +    +VP+ +T
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT 610

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ ++   C    M+    ++  M    V P+  T+++LI+G  +     +   L  +M 
Sbjct: 611 YNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMI 670

Query: 442 EINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           E   +P  +  + ++    K +  L +   F
Sbjct: 671 EKGYVPTVTSYNALIKRFYKKKKILEARELF 701



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 6/298 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + + F +   +++   TP+ VT+ +LI GLC    +  A  L  ++R  G + +V  Y
Sbjct: 447 GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++VNG+C+  +   A+ L +EM           +P+ +TYTT+ID  C+ G +DKA +L
Sbjct: 507 NSMVNGICKAGNIEQAIKLMKEMEVAG------IDPDAITYTTVIDAYCRLGDIDKAHKL 560

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D+ ++P VVT+  ++ GFC      +  RL   M+++G+ P+ +T+N +M + C 
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              M+  +++   M   GV PD+ TYN L+ G C    +  A  L+  M   G   TV S
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           Y+ LI  + K K+I  A  L+ EM   G+  D  I+N      +E   VE    L DE
Sbjct: 681 YNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 242/492 (49%), Gaps = 25/492 (5%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           ++     L  +++S + PDA TF SLI G C  +++  A  LF K+ + G   DV +Y T
Sbjct: 169 LARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAT 228

Query: 64  LVNGLCRTSHTIVALNLFEEMANGN----------------GEFGVV---------CEPN 98
           L+ GLC       A+ LF EM   +                GE G++           P+
Sbjct: 229 LIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPS 288

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
           T  Y  ++D  C+E    +A+E+L +M +K + P VVT T+VI  +C     ++A R+  
Sbjct: 289 TRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLE 348

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            M  +G +PNV T+N ++   C  GK+ +A  LL+ M   GV PDA TYN L+ G C+ G
Sbjct: 349 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 408

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            +  A  L   ME  G     ++Y+ LIN  CK+   + A SL+  + ++GIKP+ V  N
Sbjct: 409 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 468

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           +L  GL +  + + A+K  ++M   G   DT+TY +FI+ LCK     E +     +   
Sbjct: 469 SLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 528

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             +     Y  +I  L K     +    +  +      P+VVTY+  +   C +G++++A
Sbjct: 529 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 588

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            ++ ++M +N V  + + ++ L+ G   I +    + +L +M  +  +P+     I++  
Sbjct: 589 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRH 648

Query: 459 LAKNEISLNSLP 470
           L +  +  + LP
Sbjct: 649 LVRMRLVEDVLP 660



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 214/408 (52%), Gaps = 12/408 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P A T+ ++I+ LC  + +  A    + +   G  PD +T+ +L+ G CRT+   VA +
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209

Query: 80  LFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           LF++M   G  +       + V+Y T+I+GLC+ G +D+A EL  +M     +P++  Y 
Sbjct: 210 LFDKMPLRGFAQ-------DVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYA 258

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++++G C A+   E   +   M + G +P+   +  ++D  C+  K  EA  +L  M + 
Sbjct: 259 ALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEK 318

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P   T   +++ +C  GR++ A  +   M+  GCK  V++Y+ L+ G+C   ++  A
Sbjct: 319 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 378

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           ++L ++M + G+ PD V +N L  G      +E AF+L   M+ +G+ AD +TY   I+ 
Sbjct: 379 MTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 438

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK+G   +A  LF +L     + +   +NSLI+GLCKSG+ +IA +    +      P+
Sbjct: 439 LCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPD 498

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
             TYS  I  LC      +      +M +  V P+ + + ++I   ++
Sbjct: 499 TYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLK 546



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 219/462 (47%), Gaps = 24/462 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  +       D  T+ +LI  LC + R  +A +LF  L   G +P+  T+
Sbjct: 408 GHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 467

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC++    +A    E+M +        C P+T TY++ I+ LCK     +    
Sbjct: 468 NSLINGLCKSGKADIAWKFLEKMVSAG------CTPDTYTYSSFIEHLCKMKGSQEGLSF 521

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M  K++KP+ V YT VI      +++    R + EM+  G  P+VVT+   M   C 
Sbjct: 522 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 581

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++EA  +L  M ++GV  D   YNTL+DG    G+ +HA  +   M S+      F+
Sbjct: 582 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 641

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y IL+    + + +E  L L                     G+++  ++   F LFD M+
Sbjct: 642 YFILLRHLVRMRLVEDVLPLTP------------------AGVWKAIELTDVFGLFDVMK 683

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +N    ++ TY + ++G  ++G   EA  L   ++      +   Y +L+   CKS R  
Sbjct: 684 KNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYL 743

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L  S+     +P +++Y  ++ GL  +GQ DKA+++F++       P+ I + ++I
Sbjct: 744 DAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVII 803

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            G I+        E++  ++ +N  P     +++ + L   E
Sbjct: 804 DGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDRE 845



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 222/483 (45%), Gaps = 23/483 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G ++L R+ +  + P    + +++   C E +  EA  +  ++   G  P V T T
Sbjct: 269 RGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCT 328

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++N  C+      AL + E M          C+PN  TY  ++ G C EG V KA  LL
Sbjct: 329 AVINAYCKEGRMSDALRVLELMKLRG------CKPNVWTYNALVQGFCNEGKVHKAMTLL 382

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+   + P+ VTY  +IRG C       A RL   M   G+  +  T+N +++ LCK+
Sbjct: 383 NKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKD 442

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+ D+A  L D +   G++P+A T+N+L++G C +G+ + A +    M S GC    ++Y
Sbjct: 443 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTY 502

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S  I   CK K  +  LS   EML K +KP  V +  +   L +        + + EM  
Sbjct: 503 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS 562

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G   D  TY T +   C  G + EA  +   +       D  AYN+L+DG    G+ + 
Sbjct: 563 SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDH 622

Query: 363 ALELFRSLPCGVLVPNVVTYSIMI-----------------GGLCNDGQMDKARDLFLDM 405
           A+ + + +     VPN  TY I++                  G+    ++     LF  M
Sbjct: 623 AVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 682

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           ++N  +PN  T+  ++ GF       +   L+  MKE ++  +  I + +V    K++  
Sbjct: 683 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 742

Query: 466 LNS 468
           L++
Sbjct: 743 LDA 745



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 207/456 (45%), Gaps = 16/456 (3%)

Query: 37  SRIMEAAALFTKLRVFGCEPDVF------TYTTLVNGLCRTSHTIVALNLFEEMANGNGE 90
           SR + A AL   LR+    P          + +L+  L R +   +AL LF  M      
Sbjct: 90  SRHLLAVALPVVLRLHSLSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPP 149

Query: 91  FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
                 P   TY  +I  LC+   + +A   L  M     +P+  T+ S+I G+C     
Sbjct: 150 -----APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQV 204

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           + A+ LF +M  +G   +VV++  +++ LC+ G++DEA  L   M Q    PD   Y  L
Sbjct: 205 DVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAAL 260

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           + G C   R      +   M+ +G + +  +Y+ +++  C+ ++ + A  +  EM  KG+
Sbjct: 261 VKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL 320

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P VV    +     +  ++  A ++ + M+  G   + WTY   + G C  G + +A+ 
Sbjct: 321 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 380

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L + +R      D   YN LI G C  G +E A  L R +    L+ +  TY+ +I  LC
Sbjct: 381 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 440

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            DG+ D+A  LF  +E   + PN +TF+ LI G  +  +     + L KM      PD  
Sbjct: 441 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 500

Query: 451 IVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNV 486
             S  ++ L K + S   L SF     Q++V  S V
Sbjct: 501 TYSSFIEHLCKMKGSQEGL-SFIGEMLQKDVKPSTV 535


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 218/424 (51%), Gaps = 7/424 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L     P+  T+  L++ LC      EA ++   +R  GC P+V TY TLV    R   
Sbjct: 181 MLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 240

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  L   M  G        +PN VT+ ++++G+CK G ++ A+++  +M  + + P+
Sbjct: 241 VDGAERLVGMMREGG------LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPD 294

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            V+Y +++ G+C A   +EA  +F EM  +G+ P+VVTF  ++  +CK G ++ A  L+ 
Sbjct: 295 GVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVR 354

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M + G++ +  T+  L+DGFC  G ++ A      M+    K +V  Y+ LINGYC   
Sbjct: 355 QMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVG 414

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++ A  L  EM +KG+KPDVV ++T+     +      AF+L  +M   GV  D  TY 
Sbjct: 415 RMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYS 474

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + I  LC    + +A  LF  +  L  + D   Y SLIDG CK G +E AL L   +   
Sbjct: 475 SLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA 534

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            ++P+VVTYS++I GL    +  +A+ L   +     +P    +D L+    R  E   V
Sbjct: 535 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH-CCRKAELKSV 593

Query: 434 IELL 437
           + LL
Sbjct: 594 LALL 597



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 236/490 (48%), Gaps = 44/490 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     ++G + +    P+ VTF S++ G+C   ++ +A  +F ++   G  PD  +Y
Sbjct: 239 GEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSY 298

Query: 62  TTLVNGLCRTSHTIVALNLFEEMAN--------------------GNGEFGVV------- 94
            TLV G C+   +  AL++F EM                      GN E  V        
Sbjct: 299 NTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRE 358

Query: 95  --CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              + N VT+T +IDG CK+GF+D A   +  MK   IKP+VV Y ++I G+C     +E
Sbjct: 359 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDE 418

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+ L  EM  +G++P+VVT++ I+   CKN     A  L   M++ GV PDA TY++L+ 
Sbjct: 419 ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 478

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C   R++ A  LF +M  +G +   F+Y+ LI+G+CK   +E ALSL+ +M+  G+ P
Sbjct: 479 VLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLP 538

Query: 273 DVVIHNTLFVGLFEIHQVERA----FKL-----------FDEMQRNGVAADTWTYRTFID 317
           DVV ++ L  GL +  +   A    FKL           +D +      A+  +    + 
Sbjct: 539 DVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLK 598

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C  G + EA +++ ++       D   Y+ LI G C++G +  AL   + +  G   P
Sbjct: 599 GFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAP 658

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           N  +   +I GL  +G + +A  +   +     + +      LI   +       V+++L
Sbjct: 659 NSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVL 718

Query: 438 HKMKEINVMP 447
           H M +  ++P
Sbjct: 719 HGMAKDGLLP 728



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 206/430 (47%), Gaps = 42/430 (9%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  P V  Y  ++  L   S T  A   F+ M +     GV   PN  TY  ++  LC  
Sbjct: 151 GYVPSVLAYNAVLLALSDASLT-SARRFFDSMLSD----GVA--PNVYTYNILVRALCGR 203

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G   +A  +L  M+     PNVVTY +++  F  A + + A+RL   M + G++PN+VTF
Sbjct: 204 GHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTF 263

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N +++ +CK GKM++A ++ D M++ G+ PD  +YNTL+ G+C  G  + A  +F  M  
Sbjct: 264 NSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 323

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------------------- 269
            G    V +++ LI+  CK   +E A++L  +M  +G                       
Sbjct: 324 KGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 383

Query: 270 ------------IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
                       IKP VV +N L  G   + +++ A +L  EM+  G+  D  TY T I 
Sbjct: 384 ALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIIS 443

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
             CKN     A EL   +       D   Y+SLI  LC   RL  A  LF+++    L P
Sbjct: 444 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP 503

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +  TY+ +I G C +G ++ A  L   M +  V+P+V+T+ +LI G  +     +  +LL
Sbjct: 504 DEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563

Query: 438 HKMKEINVMP 447
            K+   + +P
Sbjct: 564 FKLYHEDPIP 573



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 151/335 (45%), Gaps = 26/335 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     +L  +      PD VT++++I   C       A  L  ++   G  PD  T
Sbjct: 413 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 472

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y++L+  LC       A  LF+ M     + G+  +P+  TYT++IDG CKEG V+ A  
Sbjct: 473 YSSLIRVLCGEKRLSDAHVLFKNMI----KLGL--QPDEFTYTSLIDGHCKEGNVESALS 526

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M    + P+VVTY+ +I G   +    EA++L  ++  +   P    ++ +M   C
Sbjct: 527 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM-HCC 585

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  ++                    +   LL GFC+ G +N A +++ SM          
Sbjct: 586 RKAELK-------------------SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGS 626

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            YS+LI+G+C+   +  ALS + +ML  G  P+     +L  GLFE   V  A ++  ++
Sbjct: 627 VYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 686

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
                 AD    +  ID     G +   +++ H +
Sbjct: 687 LNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGM 721



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 83/210 (39%), Gaps = 36/210 (17%)

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  P V+ +N + + L +   +  A + FD M  +GVA + +TY                
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTY---------------- 193

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
                              N L+  LC  G  + AL + R +      PNVVTY+ ++  
Sbjct: 194 -------------------NILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAA 234

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               G++D A  L   M E  + PN++TF+ ++ G  +  +     ++  +M    + PD
Sbjct: 235 FFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPD 294

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
               + +V    K   S  +L  F    Q+
Sbjct: 295 GVSYNTLVGGYCKAGCSHEALSVFAEMTQK 324


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 240/456 (52%), Gaps = 14/456 (3%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI-VA 77
           + P+ + F    + L     + EA  L  KL  +G    V +    ++ +   S  I +A
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMA 245

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           + +F        E+G+    NT +Y  II  LC+ G V +A  LL+QM  ++  P+VV+Y
Sbjct: 246 IKVF-------CEYGISW--NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSY 296

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           ++VI G+C+  +  +A +L  +M  +G++PN  T+N I+  LCK GK  EA ++L  M+ 
Sbjct: 297 STVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS 356

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
             + PD   Y TL+ GF   G V  A + F  M S        +Y+ LI G+ +  ++  
Sbjct: 357 QKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
             +L+ EM+S+G+KPD V + TL     +  ++  AF L +EM + G+  +  TY   ID
Sbjct: 417 PQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLCK+G +  A EL   +R    + ++  YNS+++G+CK+G +E A++L + +    + P
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + +TY+ +I   C  G +DKA  L  +M +  + P V+TF++L+ GF  +        LL
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
             M E  ++PDA    I  + L K     NS+ + T
Sbjct: 597 GWMLEKGIVPDA----ITYNTLMKQHCIRNSMNTTT 628



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 236/470 (50%), Gaps = 9/470 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L ++     TPD V+++++I G C    + +A  L   +++ G +P+ +T
Sbjct: 271 LGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYT 330

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +++  LC+   +  A  +  EM +          P+ V YTT+I G  K G V  A +
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQK------IIPDNVVYTTLIHGFFKLGHVRTANK 384

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M  K I P+ +TYT++I+GF       E + LF EM+ +G++P+ VT+  ++D  C
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M  A  L + M+Q G+ P+  TY  L+DG C  G ++ A EL   M   G +  V 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ ++NG CK   IE A+ L  EM   GI PD + + T+      +  +++A KL  EM
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     T+   ++G C  G + +   L   +       D   YN+L+   C    +
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
               ++++ +    + P+  TY+I+I G C    + +A  L+ +M E   VP V +++ L
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN---EISLN 467
           I+ F +  +  +  EL  +M+   ++ D  I +  VD+  +    EI+LN
Sbjct: 685 IKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLN 734



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 215/405 (53%), Gaps = 6/405 (1%)

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
           +G   +  +Y  ++  LCR      A  L  +M   +        P+ V+Y+T+IDG C 
Sbjct: 252 YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST------PDVVSYSTVIDGYCH 305

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G + KA +L+  M+ K +KPN  TY S+I   C      EA+++  EMM Q + P+ V 
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  ++    K G +  A++  D M+   + PD  TY TL+ GF   G+V   + LF  M 
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           S G K    +Y+ LI+ YCK  E+  A SL++EM+  G+ P++V +  L  GL +  +++
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +L DEM++ G+  +   Y + ++G+CK G I +A++L   + +   + D   Y ++I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           D  C+ G ++ A +L + +    L P VVT+++++ G C  G ++    L   M E  +V
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           P+ IT++ L++     N  +   ++  +M+   V PD++  +I++
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 155/298 (52%), Gaps = 6/298 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + + F +   +++   TP+ VT+ +LI GLC    +  A  L  ++R  G + +V  Y
Sbjct: 447 GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++VNG+C+  +   A+ L +EM           +P+ +TYTT+ID  C+ G +DKA +L
Sbjct: 507 NSMVNGICKAGNIEQAIKLMKEMEVAG------IDPDAITYTTVIDAYCRLGDIDKAHKL 560

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D+ ++P VVT+  ++ GFC      +  RL   M+++G+ P+ +T+N +M + C 
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              M+  +++   M   GV PD+ TYN L+ G C    +  A  L+  M   G   TV S
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           Y+ LI  + K ++   A  L+ EM   G+  D  I+N      +E   VE    L DE
Sbjct: 681 YNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 238/448 (53%), Gaps = 14/448 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+ +TF  +IK +C    + +A  +F  + +  CEPDV+TY TL++GLC+      A++
Sbjct: 196 SPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVS 255

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +EM          C P+ VT+  +I+GLCK+G + +A +L+  M  K   PN VTY +
Sbjct: 256 LLDEMQIDG------CFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNT 309

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C      +A  L   M+     PNVVT+  I++ L K G+  + + +L LM + G
Sbjct: 310 LIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERG 369

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
              + + Y+TL+ G    G+   A  LF  M   G +     YS +I+G C++ + + A+
Sbjct: 370 YCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAV 429

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + SEM +KG  P+    ++L  G FE     RA +++ +M ++    +   Y   I GL
Sbjct: 430 EVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGL 489

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL--VP 377
           CK+G + EA+ ++  +    C+ D+ AY+S+I+GL  +G +E A++L+  + C      P
Sbjct: 490 CKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQP 549

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI-RINEPSKVIEL 436
           +VVTY+I++  LC    + +A DL   M +    P+++T  + +R    +++ P    E 
Sbjct: 550 DVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREF 609

Query: 437 LHK-----MKEINVMPDASIVSIVVDLL 459
           L +     +K   V+  + IV +++  L
Sbjct: 610 LDELVVRLLKRQRVLGASKIVEVMLQKL 637



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 226/453 (49%), Gaps = 15/453 (3%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTYTTLVNGLCRTS 72
           I + CF    V F +  K    E    +A  LF ++   F C+    ++ +++N + +  
Sbjct: 123 IFEKCFI---VIFKAYGKAHLPE----KAVDLFDRMACEFECKRTGKSFNSVLNVIIQEG 175

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               AL  +  +    G  GV   PN +T+  +I  +CK G VD A ++   M  +  +P
Sbjct: 176 LFHRALEFYNHVI---GAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEP 232

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +V TY +++ G C A   +EA  L  EM   G  P+ VTFNV+++ LCK G +  A++L+
Sbjct: 233 DVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLV 292

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M   G  P+  TYNTL+ G CL G++  A  L   M S  C   V +Y  +ING  K 
Sbjct: 293 DNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQ 352

Query: 253 -KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            + ++GA  L + M  +G   +  +++TL  GLF+  + + A  LF EM   G   +T  
Sbjct: 353 GRALDGACVL-ALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIV 411

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   IDGLC++G   +AVE+   +    C  +    +SL+ G  ++G    A+E+++ + 
Sbjct: 412 YSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMA 471

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                 N V YS++I GLC DG++ +A  ++  M      P+V+ +  +I G        
Sbjct: 472 KHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVE 531

Query: 432 KVIELLHKM--KEINVMPDASIVSIVVDLLAKN 462
             ++L ++M  +  +  PD    +I+++ L K 
Sbjct: 532 DAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQ 564



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 173/343 (50%), Gaps = 29/343 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L R++ S   P+ VT+ ++I GL  + R ++ A +   +   G   + + Y
Sbjct: 318 GKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVY 377

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL++GL +   +  A++LF+EM     E       NT+ Y+ +IDGLC++G  D A E+
Sbjct: 378 STLISGLFKEGKSQEAMHLFKEMTVKGYEL------NTIVYSAVIDGLCRDGKPDDAVEV 431

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +K   PN  T +S+++GF  A + + A  ++ +M       N V ++V++  LCK
Sbjct: 432 LSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCK 491

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTV 239
           +GK+ EA  +   M+  G +PD   Y+++++G  + G V  A +L+  M   G   +  V
Sbjct: 492 DGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDV 551

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV---------------------IHN 278
            +Y+IL+N  CK   I  A+ L + ML +G  PD+V                       +
Sbjct: 552 VTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLD 611

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
            L V L +  +V  A K+ + M +  +     T+   ++ LCK
Sbjct: 612 ELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCK 654



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 154/332 (46%), Gaps = 6/332 (1%)

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T+ S+I  +    D+   +++   M  +        F VI     K    ++A  L D M
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151

Query: 196 I-QHGVRPDAFTYNTLLDGFCLTGRVNHAKELF---VSMESMGCKHTVFSYSILINGYCK 251
             +   +    ++N++L+     G  + A E +   +  + +     V +++++I   CK
Sbjct: 152 ACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCK 211

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              ++ A+ ++ +M  +  +PDV  + TL  GL +  +++ A  L DEMQ +G      T
Sbjct: 212 VGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 271

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           +   I+GLCK G +  A +L   + +  C  +   YN+LI GLC  G+LE A+ L   + 
Sbjct: 272 FNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 331

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQ-MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               VPNVVTY  +I GL   G+ +D A  L L MEE     N   +  LI G  +  + 
Sbjct: 332 SSKCVPNVVTYGTIINGLVKQGRALDGACVLAL-MEERGYCVNEYVYSTLISGLFKEGKS 390

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + + L  +M       +  + S V+D L ++
Sbjct: 391 QEAMHLFKEMTVKGYELNTIVYSAVIDGLCRD 422



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 154/329 (46%), Gaps = 35/329 (10%)

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           + G++P+      I D++ K+G    + RL D            T+ +L++ +   G   
Sbjct: 63  ENGIEPD----PPISDKIFKSGPKMGSYRLGD-----------STFYSLINNYANLGDF- 106

Query: 222 HAKELFVSMESMGC-KHTVFS--YSILINGYCKNKEIEGALSLYSEMLSK------GIKP 272
             K L   ++ M C K  +F   + ++   Y K    E A+ L+  M  +      G   
Sbjct: 107 --KSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSF 164

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEM---QRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           + V++  +  GLF      RA + ++ +   +   ++ +  T+   I  +CK G + +A+
Sbjct: 165 NSVLNVIIQEGLFH-----RALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAI 219

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           ++F  + I KCE D+  Y +L+DGLCK+ R++ A+ L   +      P+ VT++++I GL
Sbjct: 220 QVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGL 279

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C  G + +A  L  +M     +PN +T++ LI G     +  K I LL +M     +P+ 
Sbjct: 280 CKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNV 339

Query: 450 SIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
                +++ L K   +L+      + E++
Sbjct: 340 VTYGTIINGLVKQGRALDGACVLALMEER 368



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 18/220 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V   + K  FT + V ++ LI GLC + ++ EA  ++T++   GC+PDV  Y
Sbjct: 458 GNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAY 517

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++++NGL        A+ L+ EM       G   +P+ VTY  +++ LCK+  + +A +L
Sbjct: 518 SSMINGLSIAGLVEDAMQLYNEMLCQ----GPDSQPDVVTYNILLNTLCKQSSISRAIDL 573

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M D+   P++VT T  +R      D  +  R F++ +              +  L K
Sbjct: 574 LNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDEL--------------VVRLLK 619

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
             ++  AS+++++M+Q  + P   T+  +++  C   +V 
Sbjct: 620 RQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQ 659


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 231/463 (49%), Gaps = 6/463 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V  G  +  R+      P    +  LI GLC   R+ +A  LF ++      P + TY T
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++G C+  +   +  + E M   +       EP+ +T+ T++ GL K G V+ A+ +L 
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADH------IEPSLITFNTLLKGLFKAGMVEDAENVLK 308

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +MKD    P+  T++ +  G+   +    A  ++   +D GV+ N  T +++++ LCK G
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG 368

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+++A  +L   +  G+ P+   YNT++DG+C  G +  A+    +ME  G K    +Y+
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI  +C+  E+E A    ++M  KG+ P V  +N L  G    ++ ++ F +  EM+ N
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  +Y T I+ LCK   ++EA  +   +        +R YN LIDG C  G++E A
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
               + +    +  N+VTY+ +I GL   G++ +A DL L++    + P+V T++ LI G
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
           +       + I L  +MK   + P      +++ L  K  I L
Sbjct: 609 YGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIEL 651



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 232/488 (47%), Gaps = 41/488 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     F V  R+      P  +TF +L+KGL     + +A  +  +++  G  PD FT+
Sbjct: 263 GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF 322

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L +G         AL ++E   +     GV  + N  T + +++ LCKEG ++KA+E+
Sbjct: 323 SILFDGYSSNEKAEAALGVYETAVDS----GV--KMNAYTCSILLNALCKEGKIEKAEEI 376

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELC 180
           L +   K + PN V Y ++I G+C   D   A R+ IE M+ QG++P+ + +N ++   C
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEKQGMKPDHLAYNCLIRRFC 435

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+M+ A + ++ M   GV P   TYN L+ G+      +   ++   ME  G    V 
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY  LIN  CK  ++  A  +  +M  +G+ P V I+N L  G     ++E AF+   EM
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + G+  +  TY T IDGL   G + EA +L   +     + D+  YNSLI G   +G +
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNV 615

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCND---------------------------- 392
           +  + L+  +    + P + TY ++I  LC                              
Sbjct: 616 QRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHC 674

Query: 393 ----GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               G M+KA +L   M E ++  +  T++ LI G +++ +  +V  L+ +M    + P+
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734

Query: 449 ASIVSIVV 456
           A   +I+V
Sbjct: 735 ADTYNIIV 742



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 229/477 (48%), Gaps = 31/477 (6%)

Query: 3   RVSHGFVVLGRILKSCFTP--------DAVTFTS----------LIKGLCAESR-IMEAA 43
           R+     VL  +L+S  TP         A + +S          L+  L  ES+ I EAA
Sbjct: 70  RIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAA 129

Query: 44  ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
            LF  LR  G  P   + T L++ L +T    V +N+F  +   +        P+   Y 
Sbjct: 130 DLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD------FRPSKFMYG 183

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
             I    K   V K  EL  +MK   I P+V  Y  +I G C  K  N+A++LF EM+ +
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
            + P+++T+N ++D  CK G  +++ ++ + M    + P   T+NTLL G    G V  A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           + +   M+ +G     F++SIL +GY  N++ E AL +Y   +  G+K +    + L   
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L +  ++E+A ++       G+  +   Y T IDG C+ G +V A      +     + D
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
             AYN LI   C+ G +E A +    +    + P+V TY+I+IGG     + DK  D+  
Sbjct: 424 HLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIE---LLHKMKEINVMPDASIVSIVVD 457
           +ME+N  +PNV+++  LI    +    SK++E   +   M++  V P   I ++++D
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCK---GSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 199/427 (46%), Gaps = 18/427 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +LGR +     P+ V + ++I G C +  ++ A      +   G +PD   Y
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV----CEPNTVTYTTIIDGLCKEGFVDK 117
             L+   C             EM N   E   +      P+  TY  +I G  ++   DK
Sbjct: 428 NCLIRRFCELG----------EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
             ++L +M+D    PNVV+Y ++I   C      EA+ +  +M D+GV P V  +N+++D
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
             C  GK+++A R    M++ G+  +  TYNTL+DG  +TG+++ A++L + +   G K 
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            VF+Y+ LI+GY     ++  ++LY EM   GIKP +  ++ L + L     +E   +LF
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLF 656

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            EM    +  D   Y   +     +G + +A  L   +       D   YNSLI G  K 
Sbjct: 657 GEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           G+L     L   +    + P   TY+I++ G C       A   + +M+E   + +V   
Sbjct: 714 GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIG 773

Query: 418 DMLIRGF 424
           + L+ G 
Sbjct: 774 NELVSGL 780



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 171/375 (45%), Gaps = 37/375 (9%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K    PD + +  LI+  C    +  A     K+++ G  P V TY  L+ G  R     
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
              ++ +EM + NG       PN V+Y T+I+ LCK   + +A+ +   M+D+ + P V 
Sbjct: 477 KCFDILKEMED-NGTM-----PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVR 530

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
            Y  +I G C      +A R   EM+ +G++ N+VT+N ++D L   GK+ EA  LL  +
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI--------- 246
            + G++PD FTYN+L+ G+   G V     L+  M+  G K T+ +Y +LI         
Sbjct: 591 SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIE 650

Query: 247 ------------------NG----YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
                             NG    Y  + ++E A +L  +M+ K I  D   +N+L +G 
Sbjct: 651 LTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            ++ ++     L DEM    +  +  TY   + G C+    + A   +  ++      D+
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770

Query: 345 RAYNSLIDGLCKSGR 359
              N L+ GL +  R
Sbjct: 771 CIGNELVSGLKEEWR 785



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 150/325 (46%), Gaps = 39/325 (12%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F +L  +  +   P+ V++ +LI  LC  S+++EA  +   +   G  P V  Y  L++G
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
            C       A    +EM     E       N VTY T+IDGL   G + +A++LLL++  
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIEL------NLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK------ 181
           K +KP+V TY S+I G+ +A +      L+ EM   G++P + T+++++  LC       
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIEL 651

Query: 182 --------------------------NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
                                     +G M++A  L   MI+  +  D  TYN+L+ G  
Sbjct: 652 TERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G++   + L   M +   +    +Y+I++ G+C+ K+   A   Y EM  KG   DV 
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVC 771

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEM 300
           I N L  GL E  + + A  +  EM
Sbjct: 772 IGNELVSGLKEEWRSKEAEIVISEM 796



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 9/245 (3%)

Query: 224 KELF--VSMESMGCKHTVFSY---SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           KELF   S+ S   KH  FSY   S+L+N   ++K I  A  L+  + ++GI P      
Sbjct: 93  KELFSAFSLSSPSLKHD-FSYLLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLT 148

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L   L +  Q      +F  +  +      + Y   I    K   + + +ELF+ ++  
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 208

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
           +    +  YN LIDGLCK  R+  A +LF  +    L+P+++TY+ +I G C  G  +K+
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             +   M+ + + P++ITF+ L++G  +         +L +MK++  +PDA   SI+ D 
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328

Query: 459 LAKNE 463
            + NE
Sbjct: 329 YSSNE 333



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 120/242 (49%)

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++ A +LF ++ + G   +  S ++L++   K K+    ++++  +L    +P   ++  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
                 ++  V +  +LF+ M+ + +    + Y   IDGLCK   + +A +LF  +   +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
               +  YN+LIDG CK+G  E + ++   +    + P+++T++ ++ GL   G ++ A 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           ++  +M++   VP+  TF +L  G+    +    + +     +  V  +A   SI+++ L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364

Query: 460 AK 461
            K
Sbjct: 365 CK 366


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 231/477 (48%), Gaps = 41/477 (8%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ VT+ ++I GLC   R+ EA     K+      P + TY+  +NGL +      A  
Sbjct: 288 APNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANC 347

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           + +EM+    E G V  PN V Y T+IDG CK G + +A ++   M  K I PN VT  S
Sbjct: 348 VLKEMS----ELGFV--PNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNS 401

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD---------------------- 177
           +I+GFC +    +A+ +  EM+ +G+  N  +F+++++                      
Sbjct: 402 LIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN 461

Query: 178 -------------ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
                         LCK GK  EA  L   ++  G  P+  T N L+ G C  G +    
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETL 521

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +L   M   G      +Y+ LI+G CK  +++    L  EM+ KGI+PD+   N L  GL
Sbjct: 522 KLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGL 581

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               +++ A +L+ E ++NG   + +TY   IDG CK   + E   L + L   K E + 
Sbjct: 582 CNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNS 641

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YNSLI   C +G +  A  L   +    ++ +  TYS ++ GLCN G +D A+ L  +
Sbjct: 642 VVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDE 701

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           M +  ++PNV+ +  +I G+ ++ + +KV  +L +M   N+ P+    +I++D   K
Sbjct: 702 MRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCK 758



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 234/457 (51%), Gaps = 6/457 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +S    +   +L    +P++VT  SLI+G C   +I +A  +  ++   G   +  +
Sbjct: 374 MGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGS 433

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           ++ ++N LC     + AL+   EM   N        PN    TT++ GLCK G   +A E
Sbjct: 434 FSMVINWLCLKFRFVTALHFIREMLLRN------LRPNDGLLTTLVSGLCKAGKQGEAVE 487

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++  K   PN+VT  ++I G C A +  E  +L  +M+++G+  + +T+N ++   C
Sbjct: 488 LWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCC 547

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ E   L + M++ G++PD +T+N LL G C   +++ A  L+   +  G    V+
Sbjct: 548 KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y ++I+GYCK  ++E   +L +E++SK ++ + V++N+L         +  AF+L D+M
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  GV     TY + + GLC  G + +A  L   +R      ++  Y ++I G  K G++
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQM 727

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
                + + +    + PN  TY+IMI G C  G+  +A  L  +M E  ++P+ +T++  
Sbjct: 728 NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAF 787

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             G  +  +  +  ++  +M    V  D    + ++D
Sbjct: 788 TNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLID 824



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 226/459 (49%), Gaps = 6/459 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++     VL  + +  F P+ V + +LI G C    I EA  +   +   G  P+  T  
Sbjct: 341 KIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLN 400

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L+ G C++     A N+ EEM       G     N  +++ +I+ LC +     A   +
Sbjct: 401 SLIQGFCKSDQIGQAENVLEEM------IGRGLPINQGSFSMVINWLCLKFRFVTALHFI 454

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  +N++PN    T+++ G C A    EA  L+  ++ +G  PN+VT N ++  LCK 
Sbjct: 455 REMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKA 514

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G M E  +LL  M++ G+  D  TYNTL+ G C  G+V    EL   M   G +  ++++
Sbjct: 515 GNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTF 574

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++L++G C   +I+ A  L+ E    G  P+V  +  +  G  + ++VE    L +E+  
Sbjct: 575 NLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVS 634

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  ++  Y + I   C NG +  A  L   ++          Y+SL+ GLC  G ++ 
Sbjct: 635 KKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDD 694

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  L   +    L+PNVV Y+ +IGG    GQM+K   +  +M  + + PN  T+ ++I 
Sbjct: 695 AKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMID 754

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           GF ++ +  +  +LL++M E  ++PDA   +   + L K
Sbjct: 755 GFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCK 793



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 230/447 (51%), Gaps = 10/447 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   + K    P   T T L+  L   + + ++  ++  + + G  PDV  ++T++N  C
Sbjct: 208 VFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFC 267

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A+ LF +M     + GV   PN VTY  II GLCK G +D+A     +M  + 
Sbjct: 268 KGHREDDAIGLFSKME----KLGVA--PNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+++TY+  I G    +  +EA  +  EM + G  PN V +N ++D  CK G + EA 
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           ++ D M+  G+ P++ T N+L+ GFC + ++  A+ +   M   G      S+S++IN  
Sbjct: 382 KIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWL 441

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C       AL    EML + ++P+  +  TL  GL +  +   A +L+  +   G   + 
Sbjct: 442 CLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNI 501

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            T    I GLCK G + E ++L   +      FD   YN+LI G CK G+++   EL   
Sbjct: 502 VTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEE 561

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P++ T+++++ GLCN  ++D+A  L+ + ++N  VPNV T+ ++I G+ + N+
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621

Query: 430 PSK----VIELLHKMKEINVMPDASIV 452
             +    + EL+ K  E+N +   S++
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLI 648



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 166/317 (52%), Gaps = 6/317 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L  +L+     D +T+ +LI G C E ++ E   L  ++   G +PD++T+
Sbjct: 515 GNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTF 574

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++GLC       A  L+ E    NG       PN  TY  +IDG CK   V++ + L
Sbjct: 575 NLLLHGLCNADKIDEASRLWHE-CKKNGYV-----PNVYTYGVMIDGYCKANKVEEGENL 628

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++  K ++ N V Y S+IR +C   + N A RL  +M  +GV  +  T++ +M  LC 
Sbjct: 629 LNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCN 688

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D+A  LLD M + G+ P+   Y T++ G+   G++N    +   M S       F+
Sbjct: 689 IGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFT 748

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+I+G+CK  + + A  L +EM  KGI PD V +N    GL +  +VE AFK+ DEM 
Sbjct: 749 YTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMS 808

Query: 302 RNGVAADTWTYRTFIDG 318
              V  D  TY T IDG
Sbjct: 809 SGAVCLDEITYTTLIDG 825



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 178/368 (48%), Gaps = 41/368 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+    T+L+ GLC   +  EA  L+ +L   G  P++ T   L++GLC+  +    L L
Sbjct: 464 PNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKL 523

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M     E G+V +   +TY T+I G CKEG V +  EL  +M  K I+P++ T+  +
Sbjct: 524 LRDML----ERGLVFD--RITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLL 577

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C A   +EA RL+ E    G  PNV T+ V++D  CK  K++E   LL+ ++   +
Sbjct: 578 LHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKL 637

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             ++  YN+L+  +C+ G +N A  L   M+S G   +  +YS L++G C    ++ A  
Sbjct: 638 ELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKH 697

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER---------------------------- 292
           L  EM  +G+ P+VV + T+  G  ++ Q+ +                            
Sbjct: 698 LLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFC 757

Query: 293 -------AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                  A KL +EM   G+  D  TY  F +GLCK G + EA ++   +       D  
Sbjct: 758 KLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEI 817

Query: 346 AYNSLIDG 353
            Y +LIDG
Sbjct: 818 TYTTLIDG 825



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 35/366 (9%)

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A ++   +  K + P++ T T ++     A +  ++  ++  +   G+ P+V  F+ +++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA---KELFVS----- 229
             CK  + D+A  L   M + GV P+  TYN ++ G C +GR++ A   KE  V      
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 230 ---------------------------MESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
                                      M  +G       Y+ LI+GYCK   I  AL + 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +MLSKGI P+ V  N+L  G  +  Q+ +A  + +EM   G+  +  ++   I+ LC  
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
              V A+     + +     +     +L+ GLCK+G+   A+EL+  L     VPN+VT 
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS 504

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + +I GLC  G M +   L  DM E  +V + IT++ LI G  +  +  +  EL  +M +
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564

Query: 443 INVMPD 448
             + PD
Sbjct: 565 KGIQPD 570



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 109/206 (52%)

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  ++S +  KG+ P +     L   L + ++++++++++D +   G+  D   + T I+
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
             CK     +A+ LF  +  L    ++  YN++I GLCKSGRL+ A      +    + P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +++TYS+ I GL    ++D+A  +  +M E   VPN + ++ LI G+ ++   S+ +++ 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNE 463
             M    + P++  ++ ++    K++
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSD 410



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 6/108 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++   +VL  +      P+  T+T +I G C   +  EAA L  ++   G  PD  T
Sbjct: 724 LGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVT 783

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG 108
           Y    NGLC+      A  + +EM++     G VC  + +TYTT+IDG
Sbjct: 784 YNAFTNGLCKEGKVEEAFKVCDEMSS-----GAVC-LDEITYTTLIDG 825


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 233/464 (50%), Gaps = 9/464 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V   +     +      PD VTFTS+I  LC   R+ EA  LF +L      P V+ 
Sbjct: 285 VGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYA 344

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++ G         A +L E            C P+ + Y  I+  L ++G V++A  
Sbjct: 345 YNTMIMGYGSVGKFNEAYSLLERQKRKG------CIPSVIAYNCILTCLGRKGKVEEALR 398

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  MK  +  PN+ +Y  +I   C A +   A ++   M + G+ PN++T N+++D LC
Sbjct: 399 ILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLC 457

Query: 181 KNGKMDEASRLLDLMIQHGV-RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           K  ++DEA  +  L + H V  PD+ T+ +L+DG    G+VN A  L+  M   G     
Sbjct: 458 KAQRLDEACSIF-LGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNA 516

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+ LI  + K    E    +Y EM+ +G  PD+++ N     +F+  ++E+   LF+E
Sbjct: 517 VVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEE 576

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           ++  G+  D  +Y   I GL K G+  +  +LF+ ++      D RAYN +IDG CKSG+
Sbjct: 577 IKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGK 636

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A +L   +    L P VVTY  +I GL    ++D+A  LF + +  AV  NV+ +  
Sbjct: 637 VNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSS 696

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           LI GF ++    +   +L ++ +  + P+    + ++D L K E
Sbjct: 697 LIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAE 740



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 248/516 (48%), Gaps = 61/516 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L   +K    P+  ++  LI  LC    +  A  +   ++  G  P++ T 
Sbjct: 391 GKVEEALRIL-EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITV 449

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++ LC+      A ++F  + +       VC P++VT+ ++IDGL + G V+ A  L
Sbjct: 450 NIMIDRLCKAQRLDEACSIFLGLDHK------VCTPDSVTFCSLIDGLGRHGKVNDAYML 503

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M D    PN V YTS+IR F       +  +++ EMM +G  P+++  N  MD + K
Sbjct: 504 YEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFK 563

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTY---------------------------------- 207
            G++++   L + +   G+ PD  +Y                                  
Sbjct: 564 AGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRA 623

Query: 208 -NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
            N ++DGFC +G+VN A +L   M++ G + TV +Y  +I+G  K   ++ A  L+ E  
Sbjct: 624 YNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 683

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           SK +  +VV++++L  G  ++ +++ A+ + +E+ + G+  +T+T+   +D L K   I 
Sbjct: 684 SKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEID 743

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA+  F  ++ LKC  +   Y+ +++GLCK  +   A   ++ +    L PN +TY+ MI
Sbjct: 744 EALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 803

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP---------------- 430
            GL   G + +A+DLF   + +  +P+   ++ +I G    N+                 
Sbjct: 804 SGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCR 863

Query: 431 --SKV-IELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             SK  + LL  + + + +  A+IV  V+  +AK++
Sbjct: 864 IYSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQ 899



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 209/479 (43%), Gaps = 42/479 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P   T   ++       ++ EA  +   +R F   P    YTTL+  L         L
Sbjct: 163 FGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPML 222

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L  +M     E G   E     +TT+I    +EG VD A  LL +MK  +   ++V Y 
Sbjct: 223 TLLRQMQ----EIGY--EVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYN 276

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
             I  F      + A + F E+  QG+ P+ VTF  ++  LCK  ++DEA  L + +  +
Sbjct: 277 VCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSN 336

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
              P  + YNT++ G+   G+ N A  L    +  GC  +V +Y+ ++    +  ++E A
Sbjct: 337 KSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEA 396

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L +  E +     P++  +N L   L +  ++E A K+ D M+  G+  +  T    ID 
Sbjct: 397 LRIL-EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDR 455

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK   + EA  +F  L    C  D   + SLIDGL + G++  A  L+  +      PN
Sbjct: 456 LCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPN 515

Query: 379 VVTYSIMIGG---------------------------LCND--------GQMDKARDLFL 403
            V Y+ +I                             L N+        G+++K R LF 
Sbjct: 516 AVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFE 575

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +++   + P+V ++ +LI G ++        +L ++MKE  +  D    +IV+D   K+
Sbjct: 576 EIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKS 634



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 187/397 (47%), Gaps = 7/397 (1%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            Y  L+  + RT +      + EEM+     FG    P+  T   ++    K   + +A 
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAG--FG----PSNNTCIEMVASFVKSRKLREAF 187

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            ++  M+    +P    YT++I     A + +    L  +M + G +  V  F  ++   
Sbjct: 188 GVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVF 247

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            + G++D A  LLD M  +    D   YN  +D F   G+V+ A + F  ++S G     
Sbjct: 248 AREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDD 307

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +++ +I   CK + ++ A+ L+ E+ S    P V  +NT+ +G   + +   A+ L + 
Sbjct: 308 VTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLER 367

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            +R G       Y   +  L + G + EA+ +   ++ +    ++ +YN LID LCK+G 
Sbjct: 368 QKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGE 426

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LE AL++  S+    L PN++T +IMI  LC   ++D+A  +FL ++     P+ +TF  
Sbjct: 427 LEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCS 486

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           LI G  R  + +    L  KM +    P+A + + ++
Sbjct: 487 LIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLI 523



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 157/328 (47%), Gaps = 1/328 (0%)

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
            Y +++      ++    +++  EM   G  P+  T   ++    K+ K+ EA  +++ M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            +   RP    Y TL+         +    L   M+ +G + TV  ++ LI  + +   +
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + ALSL  EM S     D+V++N       ++ +V+ A+K F E++  G+  D  T+ + 
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I  LCK   + EAVELF  L   K    + AYN++I G    G+   A  L         
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           +P+V+ Y+ ++  L   G++++A  +   M+ +A  PN+ ++++LI    +  E    ++
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALK 432

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +   MKE  + P+   V+I++D L K +
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQ 460



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   +++L  +++   TP+  T+  L+  L     I EA   F  ++   C P+  T
Sbjct: 704 VGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVT 763

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +VNGLC+      A   ++EM           +PNT+TYTT+I GL + G V +AK+
Sbjct: 764 YSIMVNGLCKVRKFNKAFVFWQEMQKQG------LKPNTITYTTMISGLARVGNVLEAKD 817

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + K     P+   Y ++I G   A    +A  LF E   +G +    T  V++D L 
Sbjct: 818 LFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALH 877

Query: 181 KNGKMDEAS 189
           K   +++A+
Sbjct: 878 KADCLEQAA 886


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 213/437 (48%), Gaps = 12/437 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++      +  + +    PD  T+  +I  LC   RI  A   F  +     EPDV TY
Sbjct: 49  GKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTY 104

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GLC+      A +LF  M       G    P+ VTYTT+ID  CK    + A  L
Sbjct: 105 NTLLGGLCKNGRVAQACSLFGSME------GAGITPSDVTYTTLIDVFCKMCQFETAYGL 158

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  +   P V +Y S+I G C  +  ++A +LF EM   G +P+ VT+N ++  LC 
Sbjct: 159 LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 218

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA  LL +M+++G +PD  T+  L++G C T R+  A  LF  M   GC   + +
Sbjct: 219 KQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVT 278

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++L++  C  +++  ALS+            V+++  +F  L      +RA +L  +M 
Sbjct: 279 HTVLVSKLCILRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAARLLQKMA 336

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R GV  +  TY  F  GL      + A   F  +     E D+ AYN L+DG CK+ RL+
Sbjct: 337 RRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLD 396

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A ++ R +    L PN+VTY+ ++G  C  G+++   +L   M      P+V T+  L+
Sbjct: 397 MAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLV 456

Query: 422 RGFIRINEPSKVIELLH 438
            G   + +       L+
Sbjct: 457 AGLFMVGQADAAYSFLN 473



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 180/373 (48%), Gaps = 6/373 (1%)

Query: 91  FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
           F   C+PN ++Y  ++  LC+ G +DKA   + +M  + + P+V TY  VI   C A+  
Sbjct: 27  FSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 86

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           + A    IE  +   +P+VVT+N ++  LCKNG++ +A  L   M   G+ P   TY TL
Sbjct: 87  SRA----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 142

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           +D FC   +   A  L   M S  C  TV+SY  +ING CKN++++ A  L+ EM   G 
Sbjct: 143 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 202

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           KPD V +NTL  GL    ++  A  L   M  NG   D  T+   I+GLC    I EA  
Sbjct: 203 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFV 262

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           LF  +    C  D+  +  L+  LC   +L  AL + R+ P       V+ Y+ +   L 
Sbjct: 263 LFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYP--ACPEAVILYTPIFRELG 320

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
                D+A  L   M    V PNV+T+    +G     E  +      +M E  + PD  
Sbjct: 321 RRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 380

Query: 451 IVSIVVDLLAKNE 463
             +++VD   K +
Sbjct: 381 AYNVLVDGFCKAD 393



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 10/285 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ +LI GLC + R+ EA  L T +   G +PD  T+T L+ GLC T     A  L
Sbjct: 204 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVL 263

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN-VVTYTS 139
           F+ MA         C P+ VT+T ++  LC    + K +  L  +++    P  V+ YT 
Sbjct: 264 FQGMAKQG------CAPDLVTHTVLVSKLC---ILRKLRPALSVVRNYPACPEAVILYTP 314

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           + R     + ++ A RL  +M  +GV PNVVT+      L    +   A R    M++ G
Sbjct: 315 IFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQG 374

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD   YN L+DGFC   R++ A+++   M+  G    + +Y+ L+  +C+  ++E   
Sbjct: 375 IEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIG 434

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
            L   M+S+G +PDV   +TL  GLF + Q + A+   +     G
Sbjct: 435 ELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 135/254 (53%), Gaps = 14/254 (5%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F PD +TFT+LI+GLC   RI EA  LF  +   GC PD+ T+T LV+ LC       AL
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++              C    + YT I   L +    D+A  LL +M  + + PNVVTYT
Sbjct: 297 SVVRNYP--------ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYT 348

Query: 139 SVIRGFCYAKDWNE---AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +  +G     DW E   A R F  M++QG++P++V +NV++D  CK  ++D A +++  M
Sbjct: 349 AFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYM 405

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            Q G+ P+  TYNTL+   C  G+V    EL  +M S G +  V ++S L+ G     + 
Sbjct: 406 DQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQA 465

Query: 256 EGALSLYSEMLSKG 269
           + A S  +  +S+G
Sbjct: 466 DAAYSFLNLAMSQG 479



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 140/266 (52%), Gaps = 4/266 (1%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F  +  Q  +PN +++  ++  LC+ GK+D+A   +  M +  + PD FTYN ++D  C
Sbjct: 22  VFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLC 81

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
              R++ A E F +M     +  V +Y+ L+ G CKN  +  A SL+  M   GI P  V
Sbjct: 82  KARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV 137

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            + TL     ++ Q E A+ L   M     +   ++Y + I+GLCKN  + +A +LF  +
Sbjct: 138 TYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEM 197

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           ++  C+ D   YN+LI GLC   RL  A +L   +      P+ +T++ +I GLC   ++
Sbjct: 198 KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRI 257

Query: 396 DKARDLFLDMEENAVVPNVITFDMLI 421
            +A  LF  M +    P+++T  +L+
Sbjct: 258 KEAFVLFQGMAKQGCAPDLVTHTVLV 283



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 118/258 (45%), Gaps = 4/258 (1%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T N LLD      R      +F  + S  CK    SY  L+   C+  +I+ A S  +EM
Sbjct: 2   TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             + + PDV  +N +   L +  ++ RA + F+ M       D  TY T + GLCKNG +
Sbjct: 62  AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRV 117

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +A  LF ++           Y +LID  CK  + E A  L + +      P V +Y  +
Sbjct: 118 AQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSI 177

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I GLC + ++D+A  LF +M+     P+ +T++ LI G        +  +LL  M E   
Sbjct: 178 INGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGF 237

Query: 446 MPDASIVSIVVDLLAKNE 463
            PD    + +++ L   +
Sbjct: 238 QPDKITFTALIEGLCTTD 255


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 227/436 (52%), Gaps = 7/436 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P     + ++KGL  + R  +A  LF ++   G  PDVFTY  L++  C+      ALNL
Sbjct: 365 PSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNL 423

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+ M       GV  +P+  TY +++ G CK+G +D+A +L  +M  +  KPNVVTY ++
Sbjct: 424 FDRMKKA----GV--KPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITL 477

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +RG+   KD++ A  L  EM   GV  N  T+NV+++ +C   ++ E   +L   +  G 
Sbjct: 478 MRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGF 537

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P   TYN++++GF   G +  A  ++  M   G    + +Y+  I+GYC+    + AL 
Sbjct: 538 IPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALK 597

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + +++  +G++PD+V +N L  G  +   +  A +L   + ++G+A +T  Y + I G  
Sbjct: 598 MLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYK 657

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
               + E  + + ++       D   Y +LIDG  K G +  ALEL+  +     +P+  
Sbjct: 658 NLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAF 717

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++ +  GLC  G +D A+ L  +M    V PNV  ++MLI G++R  +  +   L  +M
Sbjct: 718 TFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEM 777

Query: 441 KEINVMPDASIVSIVV 456
             + + PD +   I+V
Sbjct: 778 LNMGIQPDDTTYDILV 793



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 217/438 (49%), Gaps = 7/438 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+ +++  L    R+ EA  +  ++R  G + DV   TTL+ G C       ALNLF+E 
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                  G+V  P  V Y  +I G  + G   KA EL  QM  + + P+    + V++G 
Sbjct: 324 LKD----GIV--PTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGL 377

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
              + W +A  LF EM D G+ P+V T+N ++   C+  K+ EA  L D M + GV+P  
Sbjct: 378 LNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSI 436

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TYN+LL G+C  G ++ A +L+  M   G K  V +Y  L+ GY   K+ + A +L  E
Sbjct: 437 NTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDE 496

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M   G+  +   +N L  G+  + +V     +       G      TY + I+G  K G 
Sbjct: 497 MKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGM 556

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A  ++  +R      +I  Y S IDG C++G  ++AL++   +    L P++V Y+ 
Sbjct: 557 MGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNA 616

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I G C +G M  A  L + + ++ + PN + ++ LI G+  +N   +V +    M +  
Sbjct: 617 LINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676

Query: 445 VMPDASIVSIVVDLLAKN 462
           ++ D S  + ++D  +K+
Sbjct: 677 IVADTSTYTTLIDGFSKD 694



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 219/454 (48%), Gaps = 7/454 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V +   +    LK    P  V +  LI+G        +A  L  ++   G  P  F  + 
Sbjct: 313 VGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSL 372

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           ++ GL        A+ LFEEMA+          P+  TY  +I   C+   + +A  L  
Sbjct: 373 VLKGLLNDRRWKDAVCLFEEMADSG-------LPDVFTYNNLIHWHCQAHKLREALNLFD 425

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +MK   +KP++ TY S++ G+C     +EA +L+ EM  +G +PNVVT+  +M       
Sbjct: 426 RMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKK 485

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
             D A  LLD M Q+GV  + +TYN L++G C+  RV     +  S  S G   T+ +Y+
Sbjct: 486 DFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYN 545

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +ING+ K   +  A ++Y +M  KG+ P+++ + +   G       + A K+ ++++R 
Sbjct: 546 SIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRR 605

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  D   Y   I+G C+ G +  A++L   L       +   YNSLI G      ++  
Sbjct: 606 GLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEV 665

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            + + S+  G +V +  TY+ +I G   DG +  A +L+ +M     +P+  TF  L  G
Sbjct: 666 SKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHG 725

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             R  +     +LL +M+ ++V P+  I +++++
Sbjct: 726 LCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLIN 759



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 184/374 (49%), Gaps = 6/374 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+ K+   P   T+ SL+ G C +  + EA  L++++ + G +P+V TY TL+ G     
Sbjct: 426 RMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKK 485

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A  L +EM       GV C  N  TY  +I+G+C    V +   +L     +   P
Sbjct: 486 DFDNAYALLDEMKQN----GVSC--NDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIP 539

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            ++TY S+I GF  A     A  ++ +M ++G+ PN++T+   +D  C+ G  D A ++L
Sbjct: 540 TMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKML 599

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + + + G++PD   YN L++GFC  G ++HA +L V +   G       Y+ LI GY   
Sbjct: 600 NDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNL 659

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             ++     Y  M+  GI  D   + TL  G  +   V  A +L+ EM   G   D +T+
Sbjct: 660 NMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTF 719

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
                GLC++G I  A +L   +R L    ++  YN LI+G  +  +L+ A  L   +  
Sbjct: 720 TALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLN 779

Query: 373 GVLVPNVVTYSIMI 386
             + P+  TY I++
Sbjct: 780 MGIQPDDTTYDILV 793



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 163/311 (52%), Gaps = 6/311 (1%)

Query: 6   HGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV 65
           + + +L  + ++  + +  T+  LI G+C   R+ E   +       G  P + TY +++
Sbjct: 489 NAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSII 548

Query: 66  NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
           NG  +      A  ++++M     E G+   PN +TYT+ IDG C+ G  D A ++L  +
Sbjct: 549 NGFVKAGMMGSAFTVYQQMR----EKGL--PPNIITYTSFIDGYCRTGCSDMALKMLNDV 602

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           + + ++P++V Y ++I GFC   + + A +L + ++  G+ PN V +N ++        M
Sbjct: 603 RRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMM 662

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
            E S+  + MI+ G+  D  TY TL+DGF   G V  A EL+  M + G     F+++ L
Sbjct: 663 KEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTAL 722

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
            +G C++ +I+GA  L  EM    ++P+V I+N L  G     +++ AF+L DEM   G+
Sbjct: 723 THGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGI 782

Query: 306 AADTWTYRTFI 316
             D  TY   +
Sbjct: 783 QPDDTTYDILV 793



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 169/354 (47%), Gaps = 3/354 (0%)

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
           GVV  P+  + T ++    +      A  L ++M+ +  + +   + +++          
Sbjct: 152 GVV--PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHE 209

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A RLF EM    + P+   + + +  LCK G    A R+L  M + G     FTY T++
Sbjct: 210 DAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMV 269

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           D    TGR+  A  +   M   G K  V   + L+ GYC  +E+  AL+L+ E L  GI 
Sbjct: 270 DVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIV 329

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P  V++  L  G  ++   ++A++L  +M   G+   T+     + GL  +    +AV L
Sbjct: 330 PTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCL 389

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +       D+  YN+LI   C++ +L  AL LF  +    + P++ TY+ ++ G C 
Sbjct: 390 FEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCK 448

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
            G MD+A  L+ +M      PNV+T+  L+RG+I   +      LL +MK+  V
Sbjct: 449 KGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGV 502



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 41/273 (15%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L   +   F P  +T+ S+I G      +  A  ++ ++R  G  P++ TYT+ ++G C
Sbjct: 528 MLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYC 587

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           RT  + +AL +  ++           +P+ V Y  +I+G C+EG +  A +LL+ +    
Sbjct: 588 RTGCSDMALKMLNDVRRRG------LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG 641

Query: 130 IKPNVVTYTSVIRGF---------------------------------CYAKDWNEA--K 154
           + PN V Y S+I G+                                  ++KD N A   
Sbjct: 642 LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFAL 701

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L+ EMM +G  P+  TF  +   LC++G +D A +LL+ M +  VRP+ F YN L++G+
Sbjct: 702 ELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGY 761

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
               ++  A  L   M +MG +    +Y IL++
Sbjct: 762 LRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 6/177 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +SH   +L  +LK    P+ V + SLI G    + + E +  +  +   G   D  TY
Sbjct: 625 GNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTY 684

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++G  +  +   AL L+ EM       G +  P+  T+T +  GLC+ G +D AK+L
Sbjct: 685 TTLIDGFSKDGNVAFALELYSEMMAK----GYI--PDAFTFTALTHGLCRSGDIDGAKKL 738

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           L +M+  +++PNV  Y  +I G+       EA RL  EM++ G+QP+  T+++++ +
Sbjct: 739 LEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSK 795



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 7/257 (2%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE---LFVSMESMGCKHTVFSYSILINGYCK 251
           M+  GV PD  +   LL     T R + AK+   LF+ M   G +   + +  L++   K
Sbjct: 148 MVARGVVPDIKSRTDLL---IRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
               E A+ L+ EM    I PD  ++      L ++    RA ++  EM+  G     +T
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFT 264

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           YRT +D L K G + EA+ +   +R    + D+    +L+ G C    +  AL LF+   
Sbjct: 265 YRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL 324

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              +VP  V Y ++I G    G   KA +L   M    ++P+     ++++G +      
Sbjct: 325 KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWK 384

Query: 432 KVIELLHKMKEINVMPD 448
             + L  +M + + +PD
Sbjct: 385 DAVCLFEEMAD-SGLPD 400



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 35/152 (23%)

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A   Y+ M+++G+ PD+     L +        + A  LF EM+  G   D W +   
Sbjct: 139 SAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMF--- 195

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
                                           ++L+    K G  E A+ LF  +P   +
Sbjct: 196 --------------------------------DALMSACLKEGMHEDAVRLFDEMPGAEI 223

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            P+   Y++ I  LC  G   +A  +  +M+E
Sbjct: 224 DPDQRVYALAITALCKLGDGGRALRMLREMKE 255


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 236/476 (49%), Gaps = 47/476 (9%)

Query: 21  PDAVTFTSLI----KGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           P+  T+T ++    +G+     I  A+ +  K+ + G  P+V TY T + GLC+     V
Sbjct: 204 PNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGV 263

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A  L + +   N      C      +  +I GLC+ G +D+A E+  +MK+  I P+V +
Sbjct: 264 AWRLIQNLCRKNQPLNNHC------FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYS 317

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y+ +I GFC     ++A  +F EM + G+ PN+ ++++++D  CK G++D+A  + + M 
Sbjct: 318 YSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMK 377

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G+ PD ++Y+ L+DGFC  G ++ A + +  M S     + F+Y  LI GY K+K+  
Sbjct: 378 NSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFA 437

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL  +  M   G+ PD +  N +           +A  L ++ Q NGV  + ++Y  FI
Sbjct: 438 NALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFI 497

Query: 317 DGLCKNGYIVE------------------------------------AVELFHTLRILKC 340
             +C+ G + E                                    AV LF  +  +  
Sbjct: 498 HRICR-GSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGI 556

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
            F+++ Y  LI+      ++++A  LF+ +    + P+ + Y+ ++ G CN G+M +AR 
Sbjct: 557 TFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARA 616

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           LF +M      PNV+T+   I  ++++N+ ++  +L  KMKE  V PD  + ++++
Sbjct: 617 LFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLI 672



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 206/417 (49%), Gaps = 6/417 (1%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F ++I GLC    + EA+ +F +++  G  PDV++Y+ L++G CR      A  +F+EM 
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
           N     G++  PN  +Y+ +IDG CKEG VDKA E+  +MK+  I P+V +Y+ +I GFC
Sbjct: 343 NS----GIL--PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFC 396

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
              D + A + + EM      P+   +  ++    K+ +   A +   +M + G+ PD  
Sbjct: 397 RKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTI 456

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
             N +L  +C     N A  L    +  G     +SY+  I+  C+    E AL L   M
Sbjct: 457 ACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVM 516

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L + + PDVV ++TL     +    E+A  LF +M + G+  +  TY   I+    +  +
Sbjct: 517 LKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKM 576

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A  LF  ++  +   D  AY SL+ G C +G +  A  LF  +      PNVVTY+  
Sbjct: 577 DVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCF 636

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           I       + ++A  L+  M+E  V P+ I + MLI  F    E ++   L  +MK+
Sbjct: 637 INEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQ 693



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 210/440 (47%), Gaps = 10/440 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           V F  LIK   + S +  A  +F + +  G E ++ +   L+  L   +       LFE 
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCK----EGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +     +FG    PN  TYT +++  C+       + +A E+L ++      PNVVTY +
Sbjct: 197 LI----KFGP--RPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGT 250

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            I+G C    +  A RL   +  +    N   FN ++  LC+ G +DEAS +   M   G
Sbjct: 251 YIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSG 310

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD ++Y+ L+DGFC  GRV+ A E+F  M + G    ++SYSILI+G+CK   ++ AL
Sbjct: 311 ILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKAL 370

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++ EM + GI PDV  ++ L  G      ++ A K ++EM  N  +   + Y + I G 
Sbjct: 371 EVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGY 430

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K+     A++ F  ++ L    D  A N ++   C+      AL L        +  N 
Sbjct: 431 YKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNP 490

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            +Y+  I  +C     +KA  L   M +  V+P+V+ +  LI  F +     K + L  K
Sbjct: 491 YSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIK 550

Query: 440 MKEINVMPDASIVSIVVDLL 459
           M ++ +  +    +I+++L 
Sbjct: 551 MTKVGITFNVKTYTILINLF 570



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 199/413 (48%), Gaps = 13/413 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     V   +  S   P+  +++ LI G C E R+ +A  +F +++  G  PDV++Y
Sbjct: 329 GRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSY 388

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK-EGFVDKAKE 120
           + L++G CR      A+  +EEM + N        P+   Y ++I G  K + F +  KE
Sbjct: 389 SILIDGFCRKGDMDSAIKFWEEMTSNN------FSPSAFNYCSLIKGYYKSKQFANALKE 442

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
             + M+   + P+ +    ++  +C   D+N+A  L  +  + GV  N  ++N  +  +C
Sbjct: 443 FRI-MQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRIC 501

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE--LFVSMESMGCKHT 238
           +    ++A +LL +M++  V PD   Y+TL+   C   R+N  K   LF+ M  +G    
Sbjct: 502 RGSVPEKALQLLPVMLKRNVLPDVVNYSTLIS--CFAKRLNSEKAVMLFIKMTKVGITFN 559

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +Y+ILIN +  + +++ A  L+  M    + PD + + +L  G     ++ RA  LFD
Sbjct: 560 VKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFD 619

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM R G + +  TY  FI+   K     +A +L+  ++      D   Y  LI   C +G
Sbjct: 620 EMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTG 679

Query: 359 RLEIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
            +  A  LF  +   G   PNVV Y+ +I       + D+A  L+ +M    +
Sbjct: 680 EMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 187/372 (50%), Gaps = 8/372 (2%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY----AKDWN 151
           E N ++   ++  L ++  VD  + L   +     +PN+ TYT ++  FC     + D  
Sbjct: 168 ELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIR 227

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
            A  +  ++   G  PNVVT+   +  LCK G    A RL+  + +     +   +N ++
Sbjct: 228 RASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVI 287

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C  G ++ A E+F  M++ G    V+SYSILI+G+C+   ++ A  ++ EM + GI 
Sbjct: 288 YGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGIL 347

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P++  ++ L  G  +  +V++A ++F+EM+ +G+  D ++Y   IDG C+ G +  A++ 
Sbjct: 348 PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKF 407

Query: 332 FHTLRILKCEFDIRAYN--SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           +  +      F   A+N  SLI G  KS +   AL+ FR +    + P+ +  + ++   
Sbjct: 408 WEEM--TSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIY 465

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C     +KA  L    +EN V  N  +++  I    R + P K ++LL  M + NV+PD 
Sbjct: 466 CRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDV 525

Query: 450 SIVSIVVDLLAK 461
              S ++   AK
Sbjct: 526 VNYSTLISCFAK 537



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 163/323 (50%), Gaps = 5/323 (1%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           K NVV +  +I+ F        A  +F+   D G++ N+++ N ++  L ++ ++D    
Sbjct: 134 KSNVV-FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRL 192

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFC----LTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           L +++I+ G RP+  TY  +++ FC     +  +  A E+   +   G    V +Y   I
Sbjct: 193 LFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYI 252

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G CK      A  L   +  K    +    N +  GL +   ++ A ++F EM+ +G+ 
Sbjct: 253 KGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGIL 312

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D ++Y   IDG C+ G + +A E+F  +R      +I +Y+ LIDG CK GR++ ALE+
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  +    ++P+V +YSI+I G C  G MD A   + +M  N   P+   +  LI+G+ +
Sbjct: 373 FEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYK 432

Query: 427 INEPSKVIELLHKMKEINVMPDA 449
             + +  ++    M+++ + PD 
Sbjct: 433 SKQFANALKEFRIMQKLGMWPDT 455



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 171/336 (50%), Gaps = 6/336 (1%)

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
           Y ++  +A  L   ++D  V+ + V F++++     N  ++ A+ +       G+  +  
Sbjct: 115 YKEENRDAGELVSLLLD--VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIM 172

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           + N LL       RV+  + LF  +   G +  + +Y+I++N +C+       +   SE+
Sbjct: 173 SCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEI 232

Query: 266 LSK----GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           L K    G  P+VV + T   GL ++     A++L   + R     +   +   I GLC+
Sbjct: 233 LGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQ 292

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA E+F  ++      D+ +Y+ LIDG C+ GR++ A E+F+ +    ++PN+ +
Sbjct: 293 GGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYS 352

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           YSI+I G C +G++DKA ++F +M+ + ++P+V ++ +LI GF R  +    I+   +M 
Sbjct: 353 YSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMT 412

Query: 442 EINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
             N  P A     ++    K++   N+L  F + ++
Sbjct: 413 SNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQK 448



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 146/326 (44%), Gaps = 46/326 (14%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+P A  + SLIKG     +   A   F  ++  G  PD      +++  CR      AL
Sbjct: 416 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKAL 475

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L E+       F      N  +Y   I  +C+    +KA +LL  M  +N+ P+VV Y+
Sbjct: 476 ALSEKFQENGVHF------NPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYS 529

Query: 139 SVIRGFCYAKDWNEAKR--LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           ++I   C+AK  N  K   LFI+M   G+  NV T+ ++++    + KMD A RL   M 
Sbjct: 530 TLIS--CFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMK 587

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           +  V PD   Y +L+ GFC TG +  A+ LF  M   GC   V +Y+  IN Y K  +  
Sbjct: 588 ESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNN 647

Query: 257 GALSLYSEMLSKGIKPD------------------------------------VVIHNTL 280
            A  LY +M  +G+ PD                                    VV++  L
Sbjct: 648 QAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCL 707

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVA 306
                ++++ ++A KL++EM+  G++
Sbjct: 708 INSYIKLNKRDQAEKLYEEMRAKGLS 733



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 7/209 (3%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           ++ K   T +  T+T LI    ++ ++  A  LF  ++     PD   YT+LV G C T 
Sbjct: 550 KMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTG 609

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A  LF+EM+         C PN VTYT  I+   K    ++A +L  +MK++ + P
Sbjct: 610 EMTRARALFDEMSREG------CSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYP 663

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRL 191
           + + YT +I  FC   + N A+ LF EM  +G   PNVV +  +++   K  K D+A +L
Sbjct: 664 DQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKL 723

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            + M   G+     +  ++ + +C   +V
Sbjct: 724 YEEMRAKGLSRLCSSEGSVSESWCCRHQV 752


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 234/465 (50%), Gaps = 9/465 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +L++ F PD+  +TS + G C    +  A  LF  + + GC    FTYT L++GLC 
Sbjct: 95  LSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCG 154

Query: 71  TSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                 A+++F  M A+G       C P+   Y T++ GLC  G   +A+ LL     + 
Sbjct: 155 AGMVREAMSVFAGMQADG-------CAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEG 207

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +PNVV Y ++I G+C   D   A  +F  M   G  PNV T+  ++   CK+ K+D A 
Sbjct: 208 FEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAM 267

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L   M+  G+ P+  TY  L+ G C  G+++ A  L  SME+ G     ++ S+LI+  
Sbjct: 268 MLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDAL 327

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK++ +  A  L   ++ KGIK + +++ +L  GL +  +   A +L   +   G   D 
Sbjct: 328 CKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDA 387

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + IDGLC+   + EA+ +   +     +     Y  +ID L +    + + ++   
Sbjct: 388 HTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDK 447

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P+V TY+I +   C++G+M+ A  + L M ++ V PN++T++ LI G+  +  
Sbjct: 448 MIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGL 507

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
            S+       M      P+    ++++ LL K E S N++P+ +V
Sbjct: 508 TSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESS-NNIPANSV 551



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 200/397 (50%), Gaps = 6/397 (1%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TYTTL+N  C      +A +L     + +        P++  YT+ + G C+ G +  A 
Sbjct: 74  TYTTLINAYC------LAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHAC 127

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L + M  +       TYT+++ G C A    EA  +F  M   G  P+   +  ++  L
Sbjct: 128 RLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGL 187

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C  G+  EA  LL   +  G  P+   YN L+DG+C  G +  A ++F  M+  GC   V
Sbjct: 188 CGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNV 247

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+G+CK+++++ A+ L+S M+  G+ P+VV +  L  G     Q++ A++L   
Sbjct: 248 RTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQS 307

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+ +G+  + WT    ID LCK+  + EA  L  +L     + +   Y SLIDGLCK+GR
Sbjct: 308 MENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGR 367

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
              A  L ++L     VP+  TYS +I GLC   ++ +A  +  DM E  V P+ +T+ +
Sbjct: 368 FAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTI 427

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +I   +R        ++L KM    + PD    +I V
Sbjct: 428 IIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFV 464



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 202/425 (47%), Gaps = 41/425 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     V   +      PD   + +++ GLC   R  EA  L +     G EP+V  Y
Sbjct: 156 GMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVY 215

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C      +A+++FE M + NG     C PN  TYT +I G CK   +D+A  L
Sbjct: 216 NALIDGYCNVGDLELAVDVFERM-DVNG-----CSPNVRTYTELISGFCKSRKLDRAMML 269

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M D  + PNVVTYT++I+G C     + A RL   M + G+ PN  T +V++D LCK
Sbjct: 270 FSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCK 329

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + ++ EA  LL  +IQ G++ +   Y +L+DG C  GR   A  L  ++ S G      +
Sbjct: 330 HERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHT 389

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI+G C+ KE+  A+ +  +M+ KG++P  V +  +   L      + + K+ D+M 
Sbjct: 390 YSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMI 449

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D +TY  F                            +R+Y       C  GR+E
Sbjct: 450 AAGIKPDVFTYTIF----------------------------VRSY-------CHEGRME 474

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +   +    + PN+VTY+ +I G  N G   +A   F  M  N   PN  ++ +L+
Sbjct: 475 DAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534

Query: 422 RGFIR 426
           R  I+
Sbjct: 535 RLLIK 539



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 213/485 (43%), Gaps = 57/485 (11%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+  T+T LI G C   ++  A  LF+++   G  P+V TYT L+ G C       A  
Sbjct: 244 SPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYR 303

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L + M N     G+V  PN  T + +ID LCK   V +A+ LL  +  K IK N + YTS
Sbjct: 304 LLQSMENS----GLV--PNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTS 357

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C A  +  A RL   ++ QG  P+  T++ ++D LC+  ++ EA  +LD M++ G
Sbjct: 358 LIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG 417

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V+P   TY  ++D        + +K++   M + G K  VF+Y+I +  YC    +E A 
Sbjct: 418 VQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAE 477

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY----RTF 315
            +   M+  G+ P++V +N L  G   +    +AF  F  M  NG   +  +Y    R  
Sbjct: 478 HMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLL 537

Query: 316 IDGLCKNGYIVEAVELFHTLRI------------LKCEFDIRAYNSLIDGLCKSGRLE-- 361
           I     N     +V ++    +            L+   +I  YN  +  LC+  RL+  
Sbjct: 538 IKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEA 597

Query: 362 ---------------------------------IALELFRSLPCGVLVPNVVTYSIMIGG 388
                                             AL    S+     +P + +Y  +I  
Sbjct: 598 KILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISS 657

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC +G +  A+ +F DM         I + +LI G ++    ++   LL  M+E N  P 
Sbjct: 658 LCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPS 717

Query: 449 ASIVS 453
            ++ +
Sbjct: 718 DALYA 722



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 150/294 (51%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N+ T+  +++  C  G +  + R L  +++ G  PD+  Y + + G+C  G + HA  LF
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
           V M   GC  T F+Y+ L++G C    +  A+S+++ M + G  PD  ++ T+  GL   
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            +   A  L  +    G   +   Y   IDG C  G +  AV++F  + +  C  ++R Y
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
             LI G CKS +L+ A+ LF  +    LVPNVVTY+ +I G C+DGQ+D A  L   ME 
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + +VPN  T  +LI    +     +   LL  + +  +  +  + + ++D L K
Sbjct: 311 SGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCK 364



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 169/384 (44%), Gaps = 57/384 (14%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV    ++LG +++     + + +TSLI GLC   R   A  L   L   G  PD  TY+
Sbjct: 332 RVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYS 391

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++GLCR      A+ + ++M     E GV  +P+ VTYT IID L +E   D +K++L
Sbjct: 392 SLIDGLCRQKELSEAMLVLDDMM----EKGV--QPSPVTYTIIIDELVREVGADGSKKIL 445

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M    IKP+V TYT  +R +C+     +A+ + + M+D GV PN+VT+N ++      
Sbjct: 446 DKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANL 505

Query: 183 GKMDEASRLLDLMIQHGVRP--DAFT---------------------------------- 206
           G   +A      M+ +G +P  +++T                                  
Sbjct: 506 GLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGL 565

Query: 207 ---------------YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
                          YN  L   C   R++ AK L + M+S     +   Y+ +I   C+
Sbjct: 566 LEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCR 625

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            K +  AL+    M+  G  P +  +  +   L E   ++ A ++F +M       +   
Sbjct: 626 LKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIA 685

Query: 312 YRTFIDGLCKNGYIVEAVELFHTL 335
           +R  IDGL + GY+ E   L   +
Sbjct: 686 WRILIDGLLQKGYVAECSSLLSVM 709



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 123/288 (42%), Gaps = 24/288 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L +++ +   PD  T+T  ++  C E R+ +A  +   +   G  P++ TY  L+ G  
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYA 503

Query: 70  RTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD----------KA 118
               T  A + F+ M ANG       C+PN  +YT ++  L K+   +          K 
Sbjct: 504 NLGLTSQAFSTFKHMVANG-------CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKI 556

Query: 119 KE------LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
            E      LL +M    +   +  Y   +   C     +EAK L IEM    + P+   +
Sbjct: 557 AEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVY 616

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
             I+   C+   + EA   +D M++ G  P   +Y  ++   C  G +  AK++F  M S
Sbjct: 617 TSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLS 676

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
               +   ++ ILI+G  +   +    SL S M  K  +P   ++  L
Sbjct: 677 KEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARL 724



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 6/153 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+    ++L  +  +  TP    +TS+I   C    + EA      +   G  P + +Y 
Sbjct: 593 RLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYR 652

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++ LC       A  +F +M +    +        + +  +IDGL ++G+V +   LL
Sbjct: 653 HIISSLCEEGSIQTAKQVFGDMLSKEYNY------EEIAWRILIDGLLQKGYVAECSSLL 706

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
             M++KN +P+   Y  +      A D  E  R
Sbjct: 707 SVMEEKNYRPSDALYARLTGKITDANDIQEIAR 739



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 76/201 (37%), Gaps = 47/201 (23%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           +   +  LC   R+ EA  L  +++     P    YT+++   CR      AL   + M 
Sbjct: 581 YNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMV 640

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                 G +  P   +Y  II  LC+EG +  AK++   M                    
Sbjct: 641 KS----GYI--PQLESYRHIISSLCEEGSIQTAKQVFGDM-------------------- 674

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            +K++N  +               + + +++D L + G + E S LL +M +   RP   
Sbjct: 675 LSKEYNYEE---------------IAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDA 719

Query: 206 TYNTLLDGFCLTGRVNHAKEL 226
            Y        LTG++  A ++
Sbjct: 720 LYAR------LTGKITDANDI 734


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 208/389 (53%), Gaps = 11/389 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F PD  T+  LI+ LC    +++A A+F  +   GC P V TY+ L++  C+ S    A+
Sbjct: 156 FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAV 215

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L +EM +        CEP+ VTY  +I+ +C +G V +A ++L  +     KP+ VTYT
Sbjct: 216 VLLDEMRSKG------CEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYT 269

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            V++  C ++ W EA +L  +M      P+ VTFN ++  LC+ G +  A+++L  M +H
Sbjct: 270 PVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEH 329

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHA----KELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           G  PD  TY++++DG C   RV+ A    KEL   M S  C     +++ +I   C+   
Sbjct: 330 GCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGL 389

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVG-LFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            + A+ +  EM   G  PD+  +N +  G L +  + E A  L + M  NG+  DT TY+
Sbjct: 390 FDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYK 449

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           +   GL +   +  A+ +F  ++ +    D   YN+++ GLCK  R ++A++ F  +   
Sbjct: 450 SLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSN 509

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
             +P+  TY I++ G+  +G +++A++L 
Sbjct: 510 GCMPDESTYIILVEGIAYEGFLEEAKELL 538



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 203/406 (50%), Gaps = 14/406 (3%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           +T+ +++ G C    I  A  +   +      PD FTY  L+  LC     + AL +F++
Sbjct: 129 ITYNTMVNGYCRAGNIDAARRMIDSVPF---APDTFTYNPLIRALCVRGCVLDALAVFDD 185

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M +        C P+ VTY+ ++D  CKE    +A  LL +M+ K  +P++VTY  +I  
Sbjct: 186 MLHRG------CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINA 239

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C   D  EA ++   +   G +P+ VT+  ++  LC + + +EA +LL  M  +   PD
Sbjct: 240 MCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPD 299

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY- 262
             T+N ++   C  G V  A ++   M   GC   + +YS +++G CK + ++ A+ L  
Sbjct: 300 EVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLK 359

Query: 263 ---SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG- 318
              +EM+SK   PD V  NT+   L +    +RA K+ DEM  +G   D  TY   +DG 
Sbjct: 360 ELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGF 419

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK+    EA++L + +       D   Y SL  GL +   +E A+ +FR +    L P+
Sbjct: 420 LCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPD 479

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            + Y+ ++ GLC   + D A D F  M  N  +P+  T+ +L+ G 
Sbjct: 480 KMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGI 525



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 216/445 (48%), Gaps = 17/445 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  +    LIK LCA+ R+ +A  +   L   G    + TY T+VNG CR  +   A  +
Sbjct: 94  PAVIPCNILIKKLCADGRVADAERVVEAL---GPSATIITYNTMVNGYCRAGNIDAARRM 150

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +          V   P+T TY  +I  LC  G V  A  +   M  +   P+VVTY+ +
Sbjct: 151 IDS---------VPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSIL 201

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C    + +A  L  EM  +G +P++VT+NV+++ +C  G + EA ++L+ +  +G 
Sbjct: 202 LDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGC 261

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PDA TY  +L   C + R   A +L   M S  C     +++ +I   C+   +  A  
Sbjct: 262 KPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATK 321

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA----ADTWTYRTFI 316
           + ++M   G  PD++ ++++  GL +  +V+ A KL  E+    V+     D  T+ T I
Sbjct: 322 VLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTII 381

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG-LCKSGRLEIALELFRSLPCGVL 375
             LC+ G    A+++   +    C  DI  YN ++DG LCKS + E AL+L   +    L
Sbjct: 382 TSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGL 441

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+  TY  +  GL  + +M++A  +F  ++   + P+ + ++ ++ G  +       I+
Sbjct: 442 CPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAID 501

Query: 436 LLHKMKEINVMPDASIVSIVVDLLA 460
               M     MPD S   I+V+ +A
Sbjct: 502 FFAYMVSNGCMPDESTYIILVEGIA 526



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 206/437 (47%), Gaps = 17/437 (3%)

Query: 30  IKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNG 89
           ++GL     +  A  L   +   G +P V     L+  LC       A  + E +     
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP--- 124

Query: 90  EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
                     +TY T+++G C+ G +D A+ ++  +      P+  TY  +IR  C    
Sbjct: 125 ------SATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGC 175

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
             +A  +F +M+ +G  P+VVT+++++D  CK     +A  LLD M   G  PD  TYN 
Sbjct: 176 VLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNV 235

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           L++  C  G V  A ++  S+ S GCK    +Y+ ++   C ++  E A  L ++M S  
Sbjct: 236 LINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND 295

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
             PD V  N +   L +   V RA K+  +M  +G   D  TY + +DGLCK   + EA+
Sbjct: 296 CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAI 355

Query: 330 ELFHTLRI----LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
           +L   L        C  D   +N++I  LC+ G  + A+++   +     +P++ TY+ +
Sbjct: 356 KLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCI 415

Query: 386 IGG-LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           + G LC   + ++A DL   M  N + P+  T+  L  G  R +E  + I +  +++ + 
Sbjct: 416 VDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMG 475

Query: 445 VMPDASIVSIVVDLLAK 461
           + PD  + + ++  L K
Sbjct: 476 LSPDKMLYNAILLGLCK 492



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 6/218 (2%)

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           + G  +  E++GAL L   +   G  P V+  N L   L    +V  A ++ + +   G 
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GP 124

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
           +A   TY T ++G C+ G I  A  +  ++       D   YN LI  LC  G +  AL 
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSVPFAP---DTFTYNPLIRALCVRGCVLDALA 181

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           +F  +      P+VVTYSI++   C +    +A  L  +M      P+++T+++LI    
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
              +  + +++L+ +      PDA   + V+  L  +E
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSE 279


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 229/440 (52%), Gaps = 6/440 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+  +I  LC   ++  A  +   ++  G  P+V T   +V+ LC+      A ++
Sbjct: 407 PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSI 466

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE + +        C P+ VTY ++I+GL + G VD+A +L  QM D N  PN V YTS+
Sbjct: 467 FEGLDHK------TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           IR F       +  +++ EM+  G  P+++  N  MD + K G++++   L   +   G 
Sbjct: 521 IRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGF 580

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PDA +Y  L+ G    G  + A ELF +M+  GC     +Y+ +I+G+CK+ ++  A  
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM +KG +P VV + ++  GL +I +++ A+ LF+E +  G+  +   Y + IDG  
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G I EA  +   L       ++  +N L+D L K+  +  AL  F+S+      PN +
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYI 760

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TYSI+I GLC   + +KA   + +M++    PNV T+  +I G  +     +   L  K 
Sbjct: 761 TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKF 820

Query: 441 KEINVMPDASIVSIVVDLLA 460
           KE   + D++I + +++ L+
Sbjct: 821 KEKGGVADSAIYNAIIEGLS 840



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 230/462 (49%), Gaps = 7/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   +     +  +    D VT+TS+I  LC   R+ EA  LF  +      P  + Y
Sbjct: 284 GKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAY 343

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ G         A +L E            C P+ V+Y  I+  L ++G VD+A + 
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKG------CIPSVVSYNCILSCLGRKGQVDEALKK 397

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK K+  PN+ TY  +I   C A     A  +   M D G+ PNV+T N+++D LCK
Sbjct: 398 FEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCK 456

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++D+A  + + +     RPDA TY +L++G    GRV+ A +L+  M           
Sbjct: 457 AQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVV 516

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI  + K    E    +Y+EML  G  PD+++ NT    +F+  ++E+   LF E++
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  +Y   I GL K G+  EA ELF+T++   C  D RAYN++IDG CKSG++ 
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L   +      P VVTY  +I GL    ++D+A  LF + +   +  NV+ +  LI
Sbjct: 637 KAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            GF ++    +   ++ ++ +  + P+    + ++D L K E
Sbjct: 697 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 738



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 217/441 (49%), Gaps = 7/441 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P A  + ++I G     +  +A +L  + R  GC P V +Y  +++ L R      AL  
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKK 397

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FEEM            PN  TY  +ID LCK G ++ A  +   MKD  + PNV+T   +
Sbjct: 398 FEEMKKD-------AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIM 450

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C A+  ++A  +F  +  +  +P+ VT+  +++ L ++G++DEA +L + M+    
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+A  Y +L+  F   GR     +++  M  +GC   +   +  ++   K  EIE   +
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ E+ + G  PD   +  L  GL +      A++LF  M+  G   DT  Y T IDG C
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+G + +A +L   ++    E  +  Y S+IDGL K  RL+ A  LF       +  NVV
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            YS +I G    G++D+A  +  ++ +  + PNV T++ L+   ++  E S+ +     M
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 441 KEINVMPDASIVSIVVDLLAK 461
           K++   P+    SI++  L K
Sbjct: 751 KDLKCTPNYITYSILIHGLCK 771



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 183/362 (50%), Gaps = 6/362 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +   +L+   +PD +   + +  +     I +  ALF +++  G  PD  +Y
Sbjct: 528 GRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSY 587

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GL +      A  LF  M          C  +T  Y T+IDG CK G V+KA +L
Sbjct: 588 TILIHGLVKAGFAHEAYELFYTMKEQG------CVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK K  +P VVTY SVI G       +EA  LF E   +G++ NVV ++ ++D   K
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA  +++ ++Q G+ P+ +T+N LLD       ++ A   F SM+ + C     +
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYIT 761

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILI+G CK ++   A   + EM  +G KP+V  + T+  GL +   +  A  LF++ +
Sbjct: 762 YSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G  AD+  Y   I+GL       +A  LF   R+  C    +    L+D L K+  +E
Sbjct: 822 EKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIE 881

Query: 362 IA 363
            A
Sbjct: 882 QA 883



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 222/460 (48%), Gaps = 7/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+    + +L R  +    P  V++  ++  L  + ++ EA   F +++     P++ TY
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTY 412

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++ LC+      AL + + M +  G F     PN +T   ++D LCK   +D A  +
Sbjct: 413 NIMIDMLCKAGKLETALVVRDAMKDA-GLF-----PNVITVNIMVDRLCKAQRLDDACSI 466

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K  +P+ VTY S+I G       +EA +L+ +M+D    PN V +  ++    K
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ ++  ++ + M++ G  PD    NT +D     G +   + LF  ++++G      S
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS 586

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+G  K      A  L+  M  +G   D   +NT+  G  +  +V +A++L +EM+
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G      TY + IDGL K   + EA  LF   +    E ++  Y+SLIDG  K GR++
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +   L    L PNV T++ ++  L    ++ +A   F  M++    PN IT+ +LI
Sbjct: 707 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILI 766

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G  +I + +K      +M++    P+    + ++  LAK
Sbjct: 767 HGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAK 806



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 212/460 (46%), Gaps = 7/460 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P   T   ++       ++ EA      +R     P    YT L+  L  +  +   L
Sbjct: 161 FGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF++M     E G     N   +TT+I    +EG VD A  LL +MK  +++P+VV Y 
Sbjct: 221 TLFQQMQ----ELGYAV--NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYN 274

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
             I  F  A   + A + F EM   G+  + VT+  ++  LCK  +++EA  L + M Q+
Sbjct: 275 VCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
              P A+ YNT++ G+ + G+   A  L       GC  +V SY+ +++   +  +++ A
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEA 394

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L  + EM    I P++  +N +   L +  ++E A  + D M+  G+  +  T    +D 
Sbjct: 395 LKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDR 453

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK   + +A  +F  L    C  D   Y SLI+GL + GR++ A +L+  +     +PN
Sbjct: 454 LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPN 513

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ +I      G+ +    ++ +M      P+++  +  +    +  E  K   L  
Sbjct: 514 AVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQ 573

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           ++K +  +PDA   +I++  L K   +  +   F   ++Q
Sbjct: 574 EIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 163/335 (48%), Gaps = 6/335 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G  +   I    F PDA ++T LI GL       EA  LF  ++  GC  D   Y
Sbjct: 563 GEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G C++     A  L EEM     E      P  VTY ++IDGL K   +D+A  L
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHE------PTVVTYGSVIDGLAKIDRLDEAYML 676

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + K K I+ NVV Y+S+I GF      +EA  +  E+M +G+ PNV T+N ++D L K
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA      M      P+  TY+ L+ G C   + N A   +  M+  G K  VF+
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT 796

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K   I  A +L+ +   KG   D  I+N +  GL   ++   A++LF+E +
Sbjct: 797 YTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
             G +  T T    +D L K   I +A  +   LR
Sbjct: 857 LKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 185/397 (46%), Gaps = 7/397 (1%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            Y +L+  + RT        + EEM+     FG    P+  T   I+    K   + +A 
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAG--FG----PSNNTCIEIVLSFIKSRKLREAF 185

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
             +  M+    +P    YT++I     ++D +    LF +M + G   NV  F  ++   
Sbjct: 186 TFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVF 245

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            + G++D A  LLD M  + + PD   YN  +D F   G+V+ A + F  M++ G     
Sbjct: 246 AREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDD 305

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +I   CK   +  A+ L+  M      P    +NT+ +G     + E A+ L + 
Sbjct: 306 VTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER 365

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            +R G      +Y   +  L + G + EA++ F  ++      ++  YN +ID LCK+G+
Sbjct: 366 QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGK 424

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LE AL +  ++    L PNV+T +IM+  LC   ++D A  +F  ++     P+ +T+  
Sbjct: 425 LETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCS 484

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           LI G  R     +  +L  +M + N +P+A + + ++
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   ++++  +++   TP+  T+  L+  L     I EA   F  ++   C P+  T
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYIT 761

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L++GLC+      A   ++EM           +PN  TYTT+I GL K G + +A  
Sbjct: 762 YSILIHGLCKIRKFNKAFVFWQEMQKQG------FKPNVFTYTTMISGLAKAGNIVEADT 815

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + K+K    +   Y ++I G   A   ++A RLF E   +G      T  V++D L 
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLH 875

Query: 181 KNGKMDEAS 189
           K   +++A+
Sbjct: 876 KAECIEQAA 884



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 91/205 (44%)

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L + +    +     ++ +EM   G      T    +    K+  + EA     T+R
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
            LK      AY +LI  L  S   +  L LF+ +       NV  ++ +I     +G++D
Sbjct: 193 KLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVD 252

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L  +M+ N++ P+V+ +++ I  F +  +     +  H+MK   ++ D    + ++
Sbjct: 253 AALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMI 312

Query: 457 DLLAKNEISLNSLPSFTVHEQQEEV 481
            +L K +    ++  F   +Q ++V
Sbjct: 313 GVLCKADRLNEAVELFEHMDQNKQV 337


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 229/440 (52%), Gaps = 6/440 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+  +I  LC   ++  A  +   ++  G  P+V T   +V+ LC+      A ++
Sbjct: 407 PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSI 466

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE + +        C P+ VTY ++I+GL + G VD+A +L  QM D N  PN V YTS+
Sbjct: 467 FEGLDHK------TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           IR F       +  +++ EM+  G  P+++  N  MD + K G++++   L   +   G 
Sbjct: 521 IRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGF 580

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PDA +Y  L+ G    G  + A ELF +M+  GC     +Y+ +I+G+CK+ ++  A  
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM +KG +P VV + ++  GL +I +++ A+ LF+E +  G+  +   Y + IDG  
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G I EA  +   L       ++  +N L+D L K+  +  AL  F+S+      PN +
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYI 760

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TYSI+I GLC   + +KA   + +M++    PNV T+  +I G  +     +   L  K 
Sbjct: 761 TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKF 820

Query: 441 KEINVMPDASIVSIVVDLLA 460
           KE   + D++I + +++ L+
Sbjct: 821 KEKGGVADSAIYNAIIEGLS 840



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 230/462 (49%), Gaps = 7/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   +     +  +    D VT+TS+I  LC   R+ EA  LF  +      P  + Y
Sbjct: 284 GKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAY 343

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ G         A +L E            C P+ V+Y  I+  L ++G VD+A + 
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKG------CIPSVVSYNCILSCLGRKGQVDEALKK 397

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK K+  PN+ TY  +I   C A     A  +   M D G+ PNV+T N+++D LCK
Sbjct: 398 FEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCK 456

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++D+A  + + +     RPDA TY +L++G    GRV+ A +L+  M           
Sbjct: 457 AQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVV 516

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI  + K    E    +Y+EML  G  PD+++ NT    +F+  ++E+   LF E++
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  +Y   I GL K G+  EA ELF+T++   C  D RAYN++IDG CKSG++ 
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L   +      P VVTY  +I GL    ++D+A  LF + +   +  NV+ +  LI
Sbjct: 637 KAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            GF ++    +   ++ ++ +  + P+    + ++D L K E
Sbjct: 697 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 738



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 217/441 (49%), Gaps = 7/441 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P A  + ++I G     +  +A +L  + R  GC P V +Y  +++ L R      AL  
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKK 397

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FEEM            PN  TY  +ID LCK G ++ A  +   MKD  + PNV+T   +
Sbjct: 398 FEEMKKD-------AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIM 450

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C A+  ++A  +F  +  +  +P+ VT+  +++ L ++G++DEA +L + M+    
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+A  Y +L+  F   GR     +++  M  +GC   +   +  ++   K  EIE   +
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ E+ + G  PD   +  L  GL +      A++LF  M+  G   DT  Y T IDG C
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+G + +A +L   ++    E  +  Y S+IDGL K  RL+ A  LF       +  NVV
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            YS +I G    G++D+A  +  ++ +  + PNV T++ L+   ++  E S+ +     M
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 441 KEINVMPDASIVSIVVDLLAK 461
           K++   P+    SI++  L K
Sbjct: 751 KDLKCTPNYITYSILIHGLCK 771



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 183/362 (50%), Gaps = 6/362 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +   +L+   +PD +   + +  +     I +  ALF +++  G  PD  +Y
Sbjct: 528 GRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSY 587

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GL +      A  LF  M          C  +T  Y T+IDG CK G V+KA +L
Sbjct: 588 TILIHGLVKAGFAHEAYELFYTMKEQG------CVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK K  +P VVTY SVI G       +EA  LF E   +G++ NVV ++ ++D   K
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA  +++ ++Q G+ P+ +T+N LLD       ++ A   F SM+ + C     +
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYIT 761

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILI+G CK ++   A   + EM  +G KP+V  + T+  GL +   +  A  LF++ +
Sbjct: 762 YSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G  AD+  Y   I+GL       +A  LF   R+  C    +    L+D L K+  +E
Sbjct: 822 EKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIE 881

Query: 362 IA 363
            A
Sbjct: 882 QA 883



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 222/460 (48%), Gaps = 7/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+    + +L R  +    P  V++  ++  L  + ++ EA   F +++     P++ TY
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTY 412

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++ LC+      AL + + M +  G F     PN +T   ++D LCK   +D A  +
Sbjct: 413 NIMIDMLCKAGKLETALVVRDAMKDA-GLF-----PNVITVNIMVDRLCKAQRLDDACSI 466

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K  +P+ VTY S+I G       +EA +L+ +M+D    PN V +  ++    K
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ ++  ++ + M++ G  PD    NT +D     G +   + LF  ++++G      S
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS 586

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI+G  K      A  L+  M  +G   D   +NT+  G  +  +V +A++L +EM+
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G      TY + IDGL K   + EA  LF   +    E ++  Y+SLIDG  K GR++
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +   L    L PNV T++ ++  L    ++ +A   F  M++    PN IT+ +LI
Sbjct: 707 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILI 766

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G  +I + +K      +M++    P+    + ++  LAK
Sbjct: 767 HGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAK 806



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 212/460 (46%), Gaps = 7/460 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P   T   ++       ++ EA      +R     P    YT L+  L  +  +   L
Sbjct: 161 FGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF++M     E G     N   +TT+I    +EG VD A  LL +MK  +++P+VV Y 
Sbjct: 221 TLFQQMQ----ELGYAV--NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYN 274

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
             I  F  A   + A + F EM   G+  + VT+  ++  LCK  +++EA  L + M Q+
Sbjct: 275 VCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
              P A+ YNT++ G+ + G+   A  L       GC  +V SY+ +++   +  +++ A
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEA 394

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L  + EM    I P++  +N +   L +  ++E A  + D M+  G+  +  T    +D 
Sbjct: 395 LKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDR 453

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK   + +A  +F  L    C  D   Y SLI+GL + GR++ A +L+  +     +PN
Sbjct: 454 LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPN 513

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            V Y+ +I      G+ +    ++ +M      P+++  +  +    +  E  K   L  
Sbjct: 514 AVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQ 573

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           ++K +  +PDA   +I++  L K   +  +   F   ++Q
Sbjct: 574 EIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 163/335 (48%), Gaps = 6/335 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G  +   I    F PDA ++T LI GL       EA  LF  ++  GC  D   Y
Sbjct: 563 GEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G C++     A  L EEM     E      P  VTY ++IDGL K   +D+A  L
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHE------PTVVTYGSVIDGLAKIDRLDEAYML 676

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + K K I+ NVV Y+S+I GF      +EA  +  E+M +G+ PNV T+N ++D L K
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA      M      P+  TY+ L+ G C   + N A   +  M+  G K  VF+
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT 796

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K   I  A +L+ +   KG   D  I+N +  GL   ++   A++LF+E +
Sbjct: 797 YTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
             G +  T T    +D L K   I +A  +   LR
Sbjct: 857 LKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 185/397 (46%), Gaps = 7/397 (1%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            Y +L+  + RT        + EEM+     FG    P+  T   I+    K   + +A 
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAG--FG----PSNNTCIEIVLSFIKSRKLREAF 185

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
             +  M+    +P    YT++I     ++D +    LF +M + G   NV  F  ++   
Sbjct: 186 TFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVF 245

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            + G++D A  LLD M  + + PD   YN  +D F   G+V+ A + F  M++ G     
Sbjct: 246 AREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDD 305

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +I   CK   +  A+ L+  M      P    +NT+ +G     + E A+ L + 
Sbjct: 306 VTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER 365

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            +R G      +Y   +  L + G + EA++ F  ++      ++  YN +ID LCK+G+
Sbjct: 366 QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGK 424

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LE AL +  ++    L PNV+T +IM+  LC   ++D A  +F  ++     P+ +T+  
Sbjct: 425 LETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCS 484

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           LI G  R     +  +L  +M + N +P+A + + ++
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   ++++  +++   TP+  T+  L+  L     I EA   F  ++   C P+  T
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYIT 761

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L++GLC+      A   ++EM           +PN  TYTT+I GL K G + +A  
Sbjct: 762 YSILIHGLCKIRKFNKAFVFWQEMQKQG------FKPNVFTYTTMISGLAKAGNIVEADT 815

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + K+K    +   Y ++I G   A   ++A RLF E   +G      T  V++D L 
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLH 875

Query: 181 KNGKMDEAS 189
           K   +++A+
Sbjct: 876 KAECIEQAA 884



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 91/205 (44%)

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L + +    +     ++ +EM   G      T    +    K+  + EA     T+R
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
            LK      AY +LI  L  S   +  L LF+ +       NV  ++ +I     +G++D
Sbjct: 193 KLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVD 252

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L  +M+ N++ P+V+ +++ I  F +  +     +  H+MK   ++ D    + ++
Sbjct: 253 AALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMI 312

Query: 457 DLLAKNEISLNSLPSFTVHEQQEEV 481
            +L K +    ++  F   +Q ++V
Sbjct: 313 GVLCKADRLNEAVELFEHMDQNKQV 337


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 227/444 (51%), Gaps = 18/444 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    G   L R+L++   P+A+ + +LI  LC    + EA +   ++    C P+V +Y
Sbjct: 43  GSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSY 101

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C+  +   AL    EM     E G    P    Y++I+   CK G V KA ++
Sbjct: 102 NIIIDGYCKARNIEKALAFLREME----ELGH--PPTPHAYSSIVQSFCKTGNVSKAMDV 155

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K  +P++V +  ++ G   A+  +EA+ LF  M  +G +P+VVT+N ++  LCK
Sbjct: 156 FAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCK 215

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+DEA  LL+ M Q  V P   TY TL+D  C   R+  A E+F  M    C  T  +
Sbjct: 216 WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPA 275

Query: 242 YS--ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           YS  ILING CK +    A  ++ EM  +GI P VV +NTL  GL    +++ A +L   
Sbjct: 276 YSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYF 335

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M     A + +TY   I  LCK   + EA +L   +R       ++ +  L+  L ++GR
Sbjct: 336 MLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGR 395

Query: 360 LEIALELFRSLP---CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           L+ A EL++ +    C  LV    + +I++ G+   G +D+A+D    M +  +VP+  T
Sbjct: 396 LDDAFELYKEMSRINCQQLVG---SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFT 452

Query: 417 FDMLIRGFI---RINEPSKVIELL 437
           +D L+ G     + ++  K++E L
Sbjct: 453 YDKLVVGLCWQGKADQARKLVEEL 476



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 211/430 (49%), Gaps = 9/430 (2%)

Query: 30  IKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNG 89
           I+ L     + +A A+  +++  G  PDV ++  L+ G  ++       +  + M    G
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEA-G 59

Query: 90  EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
            F     PN + Y  +I  LCK G + +A+  L +M  ++  PNVV+Y  +I G+C A++
Sbjct: 60  LF-----PNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARN 113

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
             +A     EM + G  P    ++ I+   CK G + +A  +   M   G  PD   +N 
Sbjct: 114 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 173

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           LL G     +++ A+ELF SM S GCK  V +Y+ +I G CK K+++ A+ L   M  + 
Sbjct: 174 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 233

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI--DGLCKNGYIVE 327
           + P  V + TL   L +  ++++A+++F++M           Y   I  +GLCK     E
Sbjct: 234 VSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGE 293

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A E+F  +R       +  YN+L++GL  + +L+ A+EL   +   V  PN+ TY I+I 
Sbjct: 294 AKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILIS 353

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC   Q+++A  L   M +   VP++  +++L+    R        EL  +M  IN   
Sbjct: 354 SLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQ 413

Query: 448 DASIVSIVVD 457
                +I++D
Sbjct: 414 LVGSSNILLD 423



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 198/367 (53%), Gaps = 3/367 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+  ++  +I G  K G   +    L +M +  + PN + Y ++I   C A    EA+  
Sbjct: 27  PDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAES- 85

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           +++ M Q   PNVV++N+I+D  CK   +++A   L  M + G  P    Y++++  FC 
Sbjct: 86  YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           TG V+ A ++F  M + GC+  + ++++L++G  + ++I  A  L+  M S+G KPDVV 
Sbjct: 146 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 205

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +NT+  GL +  +++ A  L + M++  V+    TY T ID LCK   + +A E+F  + 
Sbjct: 206 YNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMA 265

Query: 337 ILKCEFDIRAYNS--LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
              C     AY+   LI+GLCK+ R   A E+F+ +    + P VVTY+ ++ GL +  +
Sbjct: 266 EGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAK 325

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +  A +L   M +    PN+ T+++LI    + ++  +  +LL  M++   +P   I  +
Sbjct: 326 LQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEV 385

Query: 455 VVDLLAK 461
           ++  LA+
Sbjct: 386 LLSRLAR 392



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 180/363 (49%), Gaps = 9/363 (2%)

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I  L +   V +A+ ++ +MK     P+V ++  +IRGF  +  +         M++ G+
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN + +N ++  LCK G + EA   L  M QH   P+  +YN ++DG+C    +  A  
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKALA 119

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
               ME +G   T  +YS ++  +CK   +  A+ +++EM +KG +PD+V  N L  GL+
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              ++  A +LF  M   G   D  TY T I GLCK   + EAV L   ++         
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 346 AYNSLIDGLCKSGRLEIALELFRSL---PCGVLVPNVVTYS--IMIGGLCNDGQMDKARD 400
            Y +LID LCK  RL+ A E+F  +   PC    P    YS  I+I GLC   +  +A++
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEP---AYSVLILINGLCKARRPGEAKE 296

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           +F +M    + P V+T++ L+ G +   +    +EL + M +    P+     I++  L 
Sbjct: 297 MFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLC 356

Query: 461 KNE 463
           K +
Sbjct: 357 KTD 359



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 147/284 (51%), Gaps = 4/284 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ ++I GLC   ++ EA  L  +++     P   TYTTL++ LC+ +    A  +
Sbjct: 201 PDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEV 260

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE+MA G       C     +   +I+GLCK     +AKE+  +M+ + I P VVTY ++
Sbjct: 261 FEKMAEGP----CPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTL 316

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G        +A  L   M+DQ   PN+ T+ +++  LCK  +++EA +LL  M   G 
Sbjct: 317 LEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGF 376

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P    +  LL      GR++ A EL+  M  + C+  V S +IL++G  +   ++ A  
Sbjct: 377 VPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKD 436

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
              +M   GI PD   ++ L VGL    + ++A KL +E+ R+G
Sbjct: 437 FLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 231/463 (49%), Gaps = 34/463 (7%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P  ++   L+  L    +I  A A++  L+  G  P+ +TY   +  LCR  +   A+
Sbjct: 188 FVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAV 247

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++F EM     E GV   PN VT +T I+GLC     D   E L  ++  N   +   YT
Sbjct: 248 DVFREME----EAGV--NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYT 301

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +VIRGFC      EA+ +FI+M+++G+ P+   +  ++   CK G + +A  L + M+ +
Sbjct: 302 AVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSN 361

Query: 199 GVRP----------------DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++                 D   YN ++D  C  G+V  A EL   M+       V  Y
Sbjct: 362 GIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHY 421

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI GYC   ++  A +++ EM  +GI+PD+V +N L  G       + A +L D +  
Sbjct: 422 TTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGT 481

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  ++ T+   I+GLC  G + EA    +TL   KC   +  Y++++DG CK+     
Sbjct: 482 QGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED-KC---LENYSAMVDGYCKANFTRK 537

Query: 363 ALELFRSLP-CGVLV-------PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           A ELF  L   G+L        PN + Y  +IG  C DG M +A+ +F  + E  + P+V
Sbjct: 538 AYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDV 597

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           IT+ M+I G+ R+N   +  ++ + MKE  + PD    ++V+D
Sbjct: 598 ITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLD 640



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 221/415 (53%), Gaps = 27/415 (6%)

Query: 2   GRVSHGFVVLG----RILKSCFTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  SH    LG    R L++   P D   +T++I+G C+E ++ EA  +F  +   G  P
Sbjct: 271 GLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAP 330

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE----------PNTVTYTTII 106
           D + Y  L++  C+  + + A+ L  +M +   +  +V +           + V Y  ++
Sbjct: 331 DGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVV 390

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           D LCK G V++A ELL +MK + +  +VV YT++I G+C      +AK +F EM ++G++
Sbjct: 391 DALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIE 450

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P++VT+N+++    +NG   EA  LLD +   G++P++ T+N +++G C+ G+V  A+  
Sbjct: 451 PDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAF 510

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--------KPDVVIHN 278
             ++E       + +YS +++GYCK      A  L+S +  +GI        +P+ +++ 
Sbjct: 511 LNTLED----KCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYG 566

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L         ++RA  +FD +   G+  D  TY   I+G C+   + EA ++F+ ++  
Sbjct: 567 KLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKER 626

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
             + D+  Y  ++DG  K+  L+ A+ L+  +    L P++VTY+ ++ G CN G
Sbjct: 627 GIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFG 681



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 162/291 (55%), Gaps = 18/291 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L  +     + D V +T+LI G C + ++++A  +F +++  G EPD+ T
Sbjct: 396 LGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVT 455

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  LV G  R      AL L + +    G  G+  +PN+ T+  II+GLC  G V +A+ 
Sbjct: 456 YNILVGGFSRNGLKKEALELLDCI----GTQGL--KPNSATHNRIIEGLCMAGKVKEAEA 509

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG--------VQPNVVTF 172
            L  ++DK ++     Y++++ G+C A    +A  LF  +  QG        V+PN + +
Sbjct: 510 FLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMY 565

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
             ++   C++G M  A  + D++++ G+ PD  TY  +++G+C    +  A+++F  M+ 
Sbjct: 566 GKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKE 625

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            G K  V +Y+++++G+ K   ++ A++LY EM+++G++PD+V +  L  G
Sbjct: 626 RGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPG 676



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 205/439 (46%), Gaps = 41/439 (9%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGE----------F 91
           A + FT+L+  G + +V TY  L+  LCR        +L  E+  G+ E          F
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV-GSKESVLGFDITALF 138

Query: 92  GVV-------CEPNTVTYTTIIDGLCKE----GFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            V+          ++     ++D L K     G  D+A + L Q K +   P++++   +
Sbjct: 139 DVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFL 198

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +         + A  ++  +   G+ PN  T+ + +  LC+ G  +EA  +   M + GV
Sbjct: 199 MNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGV 258

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+A T +T ++G C   R +   E   ++ +       F+Y+ +I G+C   +++ A  
Sbjct: 259 NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAED 318

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ +M+++GI PD  I+  L     +   + +A  L ++M  NG+  +            
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNL----------- 367

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
                   V+ F   R      D   YN ++D LCK G++E A+EL   +    +  +VV
Sbjct: 368 --------VDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVV 419

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+ +I G C  G++  A+++F +M+E  + P+++T+++L+ GF R     + +ELL  +
Sbjct: 420 HYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCI 479

Query: 441 KEINVMPDASIVSIVVDLL 459
               + P+++  + +++ L
Sbjct: 480 GTQGLKPNSATHNRIIEGL 498



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 139/327 (42%), Gaps = 25/327 (7%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           N A   F ++ + G Q NV T+  ++  LC+     +   LL  ++  G +         
Sbjct: 78  NLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV--GSKESVL----- 130

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
             GF +T   +  +E    +E       +    +L+  Y +    + A+    +   +G 
Sbjct: 131 --GFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGF 188

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P ++  N L   L E  +++ A  ++  ++R G+  + +TY  FI  LC+ G   EAV+
Sbjct: 189 VPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVD 248

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +F  +       +    ++ I+GLC   R ++  E  R+L       +   Y+ +I G C
Sbjct: 249 VFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFC 308

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM---------- 440
           ++ ++ +A D+F+DM    + P+   +  LI  + +     + + L + M          
Sbjct: 309 SEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLV 368

Query: 441 ------KEINVMPDASIVSIVVDLLAK 461
                 ++  +  D  + +IVVD L K
Sbjct: 369 DQFKEFRDSGIFLDEVLYNIVVDALCK 395


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 236/513 (46%), Gaps = 76/513 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       V   + K    P   +  SL+  L       +A  ++ ++   G  PD+F+Y
Sbjct: 200 GMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSY 259

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +VN  C+      A N  +EM          CEPN VTY ++IDG    G V  AK++
Sbjct: 260 TIMVNAYCKEGRVDEAFNFVKEMERS------CCEPNVVTYNSLIDGYVSLGDVCGAKKV 313

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +K I  N  TYT +I+G+C      +A++L   MM++ +  +   + V++   C 
Sbjct: 314 LALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCT 373

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D+A R+ D M++ G++ +    N+L++G+C  G VN A E+ VSM+    K   + 
Sbjct: 374 AGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYG 433

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G+CK ++   A  L  EM +KG+   VV +NTL   LF +  VE A  +++ M 
Sbjct: 434 YNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMH 493

Query: 302 RNGVAADTWTYRTFID-----------------------------------GLCKNGYIV 326
           + GVA +  TY T +D                                   G CK   +V
Sbjct: 494 KRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLV 553

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL---------------ELFRSLP 371
           +A E+F  ++ L    D   Y +LIDG CK G L  AL               E++ SL 
Sbjct: 554 QAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLI 613

Query: 372 CGV--------------------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            GV                    L PNVVTY  +I G C+ G MDKA + +  M +  + 
Sbjct: 614 TGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIA 673

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           PN+I    ++    R  +  +   +LH++ +I+
Sbjct: 674 PNIIIGSKIVSSLYRHGKIDEANLILHQIADID 706



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 231/525 (44%), Gaps = 76/525 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +   +LK     + V   SLI G C    + +AA +   ++ +  +PD + Y
Sbjct: 375 GRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGY 434

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+    I A  L +EM N    F VV      TY T++  L   G V+ A  +
Sbjct: 435 NTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVV------TYNTLLKNLFHVGHVEHALHI 488

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  + + PN VTY +++  F     ++ A  ++ + + +G   ++  +N ++   CK
Sbjct: 489 WNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCK 548

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+ +A  +   M + G  PD  TY TL+DG+C  G +  A +L    E  G   +   
Sbjct: 549 MEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEM 608

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G  +++E++    L +EM ++ + P+VV + +L  G  +   +++A+  + +M 
Sbjct: 609 YNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMI 668

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT--------------------LRILKCE 341
             G+A +       +  L ++G I EA  + H                     LR L+ +
Sbjct: 669 DKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQ 728

Query: 342 -----FDIRA----------YNSLIDGLCKS----------------------------- 357
                F  +A          YN  I GLCKS                             
Sbjct: 729 KIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLI 788

Query: 358 ------GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
                 G++  A  L   +    LVPN+V Y+ +I GLC  G +D+AR LF  +    + 
Sbjct: 789 HACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLS 848

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           P V+T++ LI G+ +    ++ +EL  KM+E  + P +   S ++
Sbjct: 849 PTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLI 893



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 213/447 (47%), Gaps = 55/447 (12%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G      ++    L   FT     + ++I G C   ++++A  +F K++  G  PD  T
Sbjct: 514 VGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEIT 573

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G C+  + + AL L ++M+  +G        +T  Y ++I G+ +   + K   
Sbjct: 574 YRTLIDGYCKVGNLVEALKL-KDMSERDG-----ISSSTEMYNSLITGVFRSEELQKLNG 627

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +MK++ + PNVVTY S+I G+C     ++A   + +M+D+G+ PN++  + I+  L 
Sbjct: 628 LLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLY 687

Query: 181 KNGKMDEASRLLDLMIQHGVRP-DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           ++GK+DEA+ +L  +    + P  A  ++  L        + H +   + ++S G K   
Sbjct: 688 RHGKIDEANLILHQIAD--IDPIAAHAHSVELP----KSDLRHLETQKI-VDSFGKKAMS 740

Query: 240 FS------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
                   Y+I I G CK+K I+    + S++L KG  PD   + +L      + +V  A
Sbjct: 741 IPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEA 800

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
           F L D+M   G+  +                                   I  YN+LI+G
Sbjct: 801 FCLRDDMINAGLVPN-----------------------------------IVVYNALING 825

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCKSG L+ A  LF  L    L P VVTY+ +I G C  G+  +A +L   M E  + P+
Sbjct: 826 LCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPS 885

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKM 440
            IT+  LI G     +  + + LL++M
Sbjct: 886 SITYSTLIHGLYMEGKSEQSVGLLNEM 912



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 198/427 (46%), Gaps = 10/427 (2%)

Query: 33  LCAESRIMEAA--ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGE 90
           LC  + I  A    L +  R F   P VF     V        T  AL +F+ M    G+
Sbjct: 161 LCKNNYIASAVWDELVSVYREFSFSPTVFDMILKV--FAEKGMTKFALCVFDNM----GK 214

Query: 91  FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
            G V  P+  +  +++  L + G   KA  +  QM    I P++ +YT ++  +C     
Sbjct: 215 CGRV--PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRV 272

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           +EA     EM     +PNVVT+N ++D     G +  A ++L LM + G+  ++ TY  L
Sbjct: 273 DEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLL 332

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           + G+C  G++  A++L   M           Y +LI+ YC    ++ AL +   ML  G+
Sbjct: 333 IKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGL 392

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           K + VI N+L  G  ++  V +A ++   M+   +  D++ Y T +DG CK    ++A +
Sbjct: 393 KMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFK 452

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +      F +  YN+L+  L   G +E AL ++  +    + PN VTY  ++    
Sbjct: 453 LCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFF 512

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             G  D+A  ++ D        ++  ++ +I GF ++ +  +  E+  KMKE+   PD  
Sbjct: 513 KVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEI 572

Query: 451 IVSIVVD 457
               ++D
Sbjct: 573 TYRTLID 579



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 179/407 (43%), Gaps = 22/407 (5%)

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
            PDV +Y       C+  H +    +++E+     E  V+C+ N +  + + D       
Sbjct: 129 RPDVSSY-------CKIVHILSRARMYKEVRVYLNELVVLCKNNYIA-SAVWD------- 173

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
                EL+   ++ +  P V  +  +++ F        A  +F  M   G  P++ + N 
Sbjct: 174 -----ELVSVYREFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNS 226

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  L +NG+  +A  + + MI  G+ PD F+Y  +++ +C  GRV+ A      ME   
Sbjct: 227 LLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSC 286

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C+  V +Y+ LI+GY    ++ GA  + + M  KGI  +   +  L  G  +  Q+E+A 
Sbjct: 287 CEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAE 346

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           KL   M    +  D   Y   I   C  G + +A+ +   +  +  + +    NSLI+G 
Sbjct: 347 KLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGY 406

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK G +  A E+  S+    L P+   Y+ ++ G C      KA  L  +M    V   V
Sbjct: 407 CKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTV 466

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +T++ L++    +      + + + M +  V P+      ++D   K
Sbjct: 467 VTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFK 513



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 29/280 (10%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS------ 72
            +P+ VT+ SLI G C +  + +A   + K+   G  P++   + +V+ L R        
Sbjct: 637 LSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEAN 696

Query: 73  ---HTIVALNLFEEMANGN----------------GEFG----VVCEPNTVTYTTIIDGL 109
              H I  ++     A+                    FG     +   N + Y   I GL
Sbjct: 697 LILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGL 756

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           CK   +D  + +L  +  K   P+  TY S+I         NEA  L  +M++ G+ PN+
Sbjct: 757 CKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNI 816

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           V +N +++ LCK+G +D A RL + + + G+ P   TYNTL+DG+C  GR   A EL   
Sbjct: 817 VVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDK 876

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           M   G   +  +YS LI+G     + E ++ L +EM+  G
Sbjct: 877 MREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 150/343 (43%), Gaps = 20/343 (5%)

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           L  K    +P+V +Y  ++     A+ + E +    E++                 LCKN
Sbjct: 121 LASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELV----------------VLCKN 164

Query: 183 GKMDEA--SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             +  A    L+ +  +    P  F  + +L  F   G    A  +F +M   G   ++ 
Sbjct: 165 NYIASAVWDELVSVYREFSFSPTVF--DMILKVFAEKGMTKFALCVFDNMGKCGRVPSLR 222

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S + L++   +N E   AL +Y +M++ GI PD+  +  +     +  +V+ AF    EM
Sbjct: 223 SCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEM 282

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +R+    +  TY + IDG    G +  A ++   +       + R Y  LI G CK G++
Sbjct: 283 ERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQM 342

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A +L   +    L  +   Y ++I   C  G++D A  +   M +  +  N +  + L
Sbjct: 343 EQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSL 402

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           I G+ ++   +K  E+L  MK+ N+ PD+   + ++D   K E
Sbjct: 403 INGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQE 445



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 87/164 (53%), Gaps = 3/164 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+  TY ++I      G V++A  L   M +  + PN+V Y ++I G C + + + A+RL
Sbjct: 779 PDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRL 838

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F ++  +G+ P VVT+N ++D  CK G+  EA  L D M + G+ P + TY+TL+ G  +
Sbjct: 839 FNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYM 898

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK--NKEIEGA 258
            G+   +  L   M   G   +V    ++   Y K  +K+ E A
Sbjct: 899 EGKSEQSVGLLNEMMKAGKGSSVMD-PLVARAYVKWRDKQSESA 941


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 230/447 (51%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +  ++L     P+ VT+  L+ GLC   R+ E   L  ++      PD FTY
Sbjct: 65  GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTY 124

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L +GL RT  +   L+LF E        G        T + +++GLCK+G V KA+++
Sbjct: 125 SILFDGLTRTGESRTMLSLFAESLKKGVMLGAY------TCSILLNGLCKDGKVAKAEQV 178

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  +    + P  V Y ++I G+C  +D   A  +F +M  + ++P+ +T+N +++ LCK
Sbjct: 179 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 238

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + +A  L+  M + GV P   T+NTL+D +   G++     +   M+  G K  V S
Sbjct: 239 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 298

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +  ++  +CKN +I  A+++  +M+ K + P+  ++N++     E    E+AF L ++M+
Sbjct: 299 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 358

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +GV+A   TY   + GLC++  I EA EL +TLR      D+ +YN++I   C  G  +
Sbjct: 359 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 418

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALEL + +    + P + TY  ++  L + G++     L+  M    V P+   + +++
Sbjct: 419 KALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 478

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
             ++R    SKV  L  +M E  +  D
Sbjct: 479 DAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 223/440 (50%), Gaps = 6/440 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA ++  +I GL    +  +A  +F ++   G  P+  TY T+++G  +         L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            ++M +   +      PN VTY  ++ GLC+ G +D+ + L+ +M   ++ P+  TY+ +
Sbjct: 74  RDQMLHDGPK------PNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 127

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
             G     +      LF E + +GV     T +++++ LCK+GK+ +A ++L++++  G+
Sbjct: 128 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 187

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P    YNTL++G+C    +  A  +F  M+S   +    +Y+ LING CK + +  A  
Sbjct: 188 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 247

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM   G+ P V   NTL        Q+E+ F +  +MQ+ G+ +D  ++ + +   C
Sbjct: 248 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 307

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           KNG I EAV +   +       + + YNS+ID   +SG  E A  L   +    +  ++V
Sbjct: 308 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIV 367

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY++++ GLC   Q+D+A +L   +    + P+V++++ +I       +  K +ELL +M
Sbjct: 368 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 427

Query: 441 KEINVMPDASIVSIVVDLLA 460
            +  + P       +V  LA
Sbjct: 428 NKYGIRPTLRTYHTLVSALA 447



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 2/227 (0%)

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            FSY+++I G  ++ +   AL ++ EM+  G+ P+ + +NT+  G  +   +E  F+L D
Sbjct: 16  AFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRD 75

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M  +G   +  TY   + GLC+ G + E   L   +       D   Y+ L DGL ++G
Sbjct: 76  QMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTG 135

Query: 359 RLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
                L LF  SL  GV++    T SI++ GLC DG++ KA  +   +    +VP  + +
Sbjct: 136 ESRTMLSLFAESLKKGVML-GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           + LI G+ ++ +      +  +MK  ++ PD    + +++ L K E+
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 241



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 65/131 (49%)

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D  +YN +I GL +SG+   AL++F  +    +VPN +TY+ MI G    G ++    L 
Sbjct: 15  DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             M  +   PN++T+++L+ G  R     +   L+ +M   ++ PD    SI+ D L + 
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 463 EISLNSLPSFT 473
             S   L  F 
Sbjct: 135 GESRTMLSLFA 145



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 32/54 (59%)

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           G   P+  +Y+++I GL   G+   A  +F +M +  VVPN IT++ +I G ++
Sbjct: 10  GAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVK 63


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 217/423 (51%), Gaps = 6/423 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G ++LG +    F P  VT+ SLI  L  +  + +  +LF ++R  G  P+V  Y
Sbjct: 253 GDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIY 312

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            ++++ LC+      A+ + ++M      F   C+P+ +T+ T+I GLC EG V KA+  
Sbjct: 313 NSVIDALCKCWSATQAMVILKQM------FASGCDPDIITFNTLITGLCHEGHVRKAEHF 366

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +   + + PN ++YT +I GFC   +   A  L +EMM +G  P+VVTF  ++  L  
Sbjct: 367 LREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVV 426

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA  + + M +  V PD   YN L+ G C    +  AK +   M     +   F 
Sbjct: 427 AGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFV 486

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+ +++ +  A  ++  M  KG++PD+V  N +  G  +   +  A      M+
Sbjct: 487 YATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 546

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G   D +TY T I G  K G +  A+     +   KC+ ++  Y+SLI+G CK+G  +
Sbjct: 547 KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTD 606

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF ++    L PNVVTY+I+IG L    ++ +A   F  M  N   PN +T   L+
Sbjct: 607 SAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLV 666

Query: 422 RGF 424
            G 
Sbjct: 667 NGL 669



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 199/435 (45%), Gaps = 45/435 (10%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L++GLC E R+ E   L       GC P V  Y  L++G CR       L L  EM    
Sbjct: 210 LVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEM-EAK 268

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           G       P  VTY ++I+ L K+G ++K   L L+M+ + + PNV  Y SVI   C   
Sbjct: 269 GFL-----PTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCW 323

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
              +A  +  +M   G  P+++TFN ++  LC  G + +A   L   I+  + P+  +Y 
Sbjct: 324 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 383

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHT------------------------------ 238
            L+ GFC+ G +  A +L   ME MG  HT                              
Sbjct: 384 PLIHGFCMRGELMAASDLL--MEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 441

Query: 239 ---VFS----YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
              VF     Y++LI+G CK   +  A ++  EML K ++PD  ++ TL  G      + 
Sbjct: 442 ERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 501

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A K+F+ M+  GV  D  +    I G C+ G + EA+     +R + C  D   Y ++I
Sbjct: 502 DARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 561

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            G  K G L  AL     +      PNVVTYS +I G C  G  D A  LF +M+  A+ 
Sbjct: 562 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALS 621

Query: 412 PNVITFDMLIRGFIR 426
           PNV+T+ +LI    +
Sbjct: 622 PNVVTYTILIGSLFK 636



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 188/393 (47%), Gaps = 7/393 (1%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           +P  + ++T++  L +    D   + L  M      P      +++  +  A    +A  
Sbjct: 95  DPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATD 154

Query: 156 LFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +   + +Q G  P V   N ++  L +  + D+A +L D M+      D ++   L+ G 
Sbjct: 155 MCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGL 214

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           CL GRV    +L  +    GC   V  Y++LI+GYC+  ++   L L  EM +KG  P +
Sbjct: 215 CLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTL 274

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V + +L   L +   +E+   LF EM++ G++ +   Y + ID LCK     +A+ +   
Sbjct: 275 VTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQ 334

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C+ DI  +N+LI GLC  G +  A    R      L PN ++Y+ +I G C  G+
Sbjct: 335 MFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 394

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +  A DL ++M      P+V+TF  LI G +   + S+ + +  KM E  V PD +I ++
Sbjct: 395 LMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 454

Query: 455 VVDLLAKNEISLNSLPSFTVHEQQEEVDESNVK 487
           ++  L K  +    LP+       EE+ E NV+
Sbjct: 455 LISGLCKKHM----LPA--AKNILEEMLEKNVQ 481



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 118/280 (42%), Gaps = 58/280 (20%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V+  ++IKG C    + EA    + +R  GC PD FTYTT+++G  +  +   AL  
Sbjct: 517 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 576

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M          C+PN VTY+++I+G CK G  D A+ L   M+ + + PNVVTYT +
Sbjct: 577 LCDMIKRK------CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 630

Query: 141 IRGFCYAKDWNEAKRLFIE-MMDQGVQPNVVT---------------------------- 171
           I G  + KD      L+ E M+     PN VT                            
Sbjct: 631 I-GSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 689

Query: 172 ----------------------FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
                                 +N I+  LC++  + EA    + M + G  P+  T+ +
Sbjct: 690 KDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLS 749

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           LL GFC  G+  + + +  +         +F Y  L + Y
Sbjct: 750 LLYGFCSVGKSMNWRTILPNEFQQEEFEIIFRYKFLFDQY 789



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 13/138 (9%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +P+ VT+T LI  L  + +++ A   F  + +  C P+  T   LVNGL  TS T   +
Sbjct: 620 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL--TSCTPCVI 677

Query: 79  NLF---EEMANGNGEFGVV--------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           N         +G     VV         +P    Y  II  LC+   + +A +   +M  
Sbjct: 678 NSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAK 737

Query: 128 KNIKPNVVTYTSVIRGFC 145
           K   PN +T+ S++ GFC
Sbjct: 738 KGYVPNPITFLSLLYGFC 755


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 234/474 (49%), Gaps = 44/474 (9%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+   I GLC   R+ EA  +   L   G + D+ TY TLV GLCR     V + + +E
Sbjct: 261 VTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDE 320

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M     E G V  P+    + +I+GL K G ++ A ELL ++    + PN+  Y S+I  
Sbjct: 321 MI----ELGYV--PSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINS 374

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C      EA+ LF  M ++G+ PN VT+ +++D   +  K+D A    + MI+ G+   
Sbjct: 375 LCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISAT 434

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
            ++YN++++  C  G++  A+ LF  M   G K TV +Y+ LI+GYCK+  +  A  LY 
Sbjct: 435 VYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYH 494

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVE-------------------------------- 291
           EM  KGI P+ V    L  GL +I+++                                 
Sbjct: 495 EMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREG 554

Query: 292 ---RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
              RAF+L DEM + G++ DT+TYR  I GLC  G + EA E  + L       D   Y 
Sbjct: 555 NTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYT 614

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR-DLFLDMEE 407
           +L+ G CK GR++ AL   + +    L  ++V+Y+++I G  N  Q D+   +L  +M  
Sbjct: 615 ALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALN--QNDRILFELLREMHG 672

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             + P+ + + +LI GFI+     K  E  + M     +P++   + +V+ L K
Sbjct: 673 KGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFK 726



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 247/563 (43%), Gaps = 98/563 (17%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +   F +L ++ K    P+   + S+I  LC   ++ EA  LF+ +   G  P+  T
Sbjct: 343 MGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVT 402

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVV----------- 94
           YT L++G  R +   VA   F +M                N   +FG +           
Sbjct: 403 YTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMV 462

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +P   TYT++I G CK+G V KA +L  +M  K I PN VT+T++I G C      
Sbjct: 463 DKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMA 522

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           EA +LF EM++  + PN VT+NV+++  C+ G    A  LLD MI+ G+ PD +TY  L+
Sbjct: 523 EASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLI 582

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL------------ 259
            G C TGRV+ AKE    +     +     Y+ L+ G+CK   I+ AL            
Sbjct: 583 AGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQ 642

Query: 260 ----------------------SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
                                  L  EM  KG++PD VI+  L  G  +   +++AF+ +
Sbjct: 643 MDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFW 702

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
             M   G   ++ TY   ++GL K GY+ EA  LF  + + +   +   Y   +D L K 
Sbjct: 703 YIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKE 762

Query: 358 GRLEIALELFRSLPCGV----------------------------------LVPNVVTYS 383
           G +E AL+L  ++  G                                   +VP+ +TYS
Sbjct: 763 GNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYS 822

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
             I   C  G +D A D++  M +  + P+ + F+ LI       E  + ++L + M   
Sbjct: 823 TFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLR 882

Query: 444 NVMPDASIV-SIVVDLLAKNEIS 465
            + P  S   S++V L  +  ++
Sbjct: 883 GLKPTQSTYHSLMVQLAQRARLT 905



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 241/521 (46%), Gaps = 80/521 (15%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G  ++  +++  + P     + LI+GL     I  A  L  K+   G  P++F Y +++N
Sbjct: 314 GMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMIN 373

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL----------------- 109
            LC+T     A  LF  MA    E G+   PN VTYT +IDG                  
Sbjct: 374 SLCKTGKLEEAELLFSVMA----ERGL--NPNDVTYTILIDGFGRRAKLDVAFYYFNKMI 427

Query: 110 ------------------CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                             CK G +  A+ L  +M DK +KP V TYTS+I G+C      
Sbjct: 428 ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR--------------------- 190
           +A +L+ EM  +G+ PN VTF  ++  LC+  KM EAS+                     
Sbjct: 488 KAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLI 547

Query: 191 --------------LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
                         LLD MI+ G+ PD +TY  L+ G C TGRV+ AKE    +     +
Sbjct: 548 EGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQR 607

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA-FK 295
                Y+ L+ G+CK   I+ AL    EM+ +G++ D+V +  L  G   ++Q +R  F+
Sbjct: 608 LDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG--ALNQNDRILFE 665

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  EM   G+  D   Y   IDG  K+G + +A E ++ +       +   Y +L++GL 
Sbjct: 666 LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLF 725

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K+G +  A  LF+ +  G  +PN +TY   +  L  +G M+ A  L   M + +   N +
Sbjct: 726 KAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFA-NTV 784

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           T+++LIRG+ +I +  +  +LL  M  I ++PD    S  +
Sbjct: 785 TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFI 825



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 244/529 (46%), Gaps = 75/529 (14%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV  G +V+  +      P+  T ++L+  L    +  +   LF  L   G +PD + YT
Sbjct: 170 RVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYT 229

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +V  LC       A  +  + A GNG     C  + VTY   I+GLCK   V +A E+ 
Sbjct: 230 VVVKCLCELKDFNKAKEIINQ-AEGNG-----CSLSIVTYNVFINGLCKSKRVWEAVEVK 283

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG------------------ 164
             + +K +K ++VTY +++ G C  +++     +  EM++ G                  
Sbjct: 284 RSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKM 343

Query: 165 -----------------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                            V PN+  +N +++ LCK GK++EA  L  +M + G+ P+  TY
Sbjct: 344 GSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTY 403

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             L+DGF    +++ A   F  M   G   TV+SY+ +IN  CK  +++ A  L+ EM+ 
Sbjct: 404 TILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVD 463

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           KG+KP V  + +L  G  +   V +AFKL+ EM   G+A +T T+   I GLC+   + E
Sbjct: 464 KGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAE 523

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A +LF  +  LK   +   YN LI+G C+ G    A EL   +    L P+  TY  +I 
Sbjct: 524 ASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIA 583

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR--------------------- 426
           GLC+ G++ +A++   D+       + + +  L++GF +                     
Sbjct: 584 GLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQM 643

Query: 427 ------------INEPSKVI-ELLHKMKEINVMPDASIVSIVVDLLAKN 462
                       +N+  +++ ELL +M    + PD  I +I++D   K+
Sbjct: 644 DLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKS 692



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 230/459 (50%), Gaps = 7/459 (1%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  LI+      R+M+   +   +R +G  P+V T + L+N L R       L LF+ + 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
           N     GV  +P+   YT ++  LC+    +KAKE++ Q +      ++VTY   I G C
Sbjct: 218 NA----GV--KPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLC 271

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            +K   EA  +   + ++G++ ++VT+  ++  LC+  + +    ++D MI+ G  P   
Sbjct: 272 KSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEA 331

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
             + L++G    G +  A EL   +  +G    +F Y+ +IN  CK  ++E A  L+S M
Sbjct: 332 AVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVM 391

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             +G+ P+ V +  L  G     +++ AF  F++M   G++A  ++Y + I+  CK G +
Sbjct: 392 AERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKM 451

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A  LF  +     +  +  Y SLI G CK G +  A +L+  +    + PN VT++ +
Sbjct: 452 KMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTAL 511

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I GLC   +M +A  LF +M E  ++PN +T+++LI G  R    ++  ELL +M +  +
Sbjct: 512 ICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL 571

Query: 446 MPDA-SIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDE 483
            PD  +   ++  L +   +S        +H + + +DE
Sbjct: 572 SPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 159/354 (44%), Gaps = 29/354 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  +  F +L  ++K   +PD  T+  LI GLC+  R+ EA      L       D   Y
Sbjct: 554 GNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCY 613

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC-------------------------- 95
           T L+ G C+      AL   +EM     +  +V                           
Sbjct: 614 TALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGK 673

Query: 96  --EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
             +P+ V YT +IDG  K G + KA E    M  +   PN VTYT+++ G   A   NEA
Sbjct: 674 GMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEA 733

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           K LF  M+     PN +T+   +D L K G M+ A +L + M+Q G   +  TYN L+ G
Sbjct: 734 KLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRG 792

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +C  G+   A +L   M  +G      +YS  I  YCK   ++ A+ ++  ML +G+KPD
Sbjct: 793 YCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPD 852

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            V+ N L        +++RA +L ++M   G+     TY + +  L +   + +
Sbjct: 853 RVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQ 906



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 94/212 (44%), Gaps = 18/212 (8%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           H+  S+ ILI+   +N     A SL   +L +G+ P               HQ+   F+ 
Sbjct: 101 HSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNP---------------HQI---FEN 142

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F E  +    + +  +   I    +N  +++ V + + +R      ++R  ++L++ L +
Sbjct: 143 FFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALAR 202

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
             +    LELF +L    + P+   Y++++  LC     +KA+++    E N    +++T
Sbjct: 203 IRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVT 262

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +++ I G  +     + +E+   + E  +  D
Sbjct: 263 YNVFINGLCKSKRVWEAVEVKRSLGEKGLKAD 294


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 222/405 (54%), Gaps = 7/405 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L R L   +TP    +  +I GLC  SR+M+A  +  K+      P+VFTYT L+NGLCR
Sbjct: 76  LVRELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCR 135

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
           ++ T +A  +F+EM   NG     C+PN +TY T+I  L + G +D+A  ++++ +   +
Sbjct: 136 SNKTKLAREVFQEMKR-NG-----CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLEL 189

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
             +V+T T+++ G C A   ++A +   EM   GV+PN VT++ ++    ++G++D   R
Sbjct: 190 PTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIR 249

Query: 191 LLDL-MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             +    + G   +A  Y   LD  C  G ++ A++    +   G    V +YS+LIN +
Sbjct: 250 FFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTF 309

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +  + + +L L  +M   G+KPDVV ++TL   L +  + + AF+L + M+  G   + 
Sbjct: 310 ARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNV 369

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + +DGLCK+G + E   ++  +   +C  D+  Y+ +++GL K+G L+ A++LF  
Sbjct: 370 VTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFEL 429

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           +      P+   YS++I  LC  G++++A  ++  ME      N+
Sbjct: 430 IKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNI 474



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 214/426 (50%), Gaps = 11/426 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           T+  ++ GLC      +A  L  +L  V+   P VF Y  ++ GLCR S  + A  + E+
Sbjct: 56  TYKLVVDGLCGAGMANQALELVRELSGVY--TPTVFIYNGIITGLCRASRVMDAYKVLEK 113

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M     E  +V  PN  TYT +++GLC+      A+E+  +MK    KPN +TY ++I+ 
Sbjct: 114 MV----EESIV--PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQH 167

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
              A + +EA R+ IE     +  +V+T   I+  LCK  ++D+A + ++ M Q GVRP+
Sbjct: 168 LSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPN 227

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESM-GCKHTVFSYSILINGYCKNKEIEGALSLY 262
             TY+ L+ GF   G ++     F   ++  G      +Y   ++  CK   ++ A    
Sbjct: 228 EVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSV 287

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            E+   G+ PDVV ++ L        Q + + +L ++M+RNGV  D  TY T I+ LCK 
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
               +A  L   +       ++  YNS++DGLCKSG+++    ++  +      P+VVTY
Sbjct: 348 RKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTY 407

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           SI++ GL   G +D A  LF  ++ +   P+   + M+I    R  +  +   + H M E
Sbjct: 408 SIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGM-E 466

Query: 443 INVMPD 448
           + V  D
Sbjct: 467 VTVAGD 472



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 208/401 (51%), Gaps = 8/401 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV   + VL ++++    P+  T+T L+ GLC  ++   A  +F +++  GC+P+  TY 
Sbjct: 103 RVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYG 162

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+  L R      AL +  E      +  +    + +T TTI+ GLCK   +D A + +
Sbjct: 163 TLIQHLSRAGEIDEALRVMIE------QRSLELPTDVITCTTIVGGLCKASRLDDALKFM 216

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF-IEMMDQGVQPNVVTFNVIMDELCK 181
            +M+   ++PN VTY++++ GF    + +   R F  E   +G       +   +D LCK
Sbjct: 217 EEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCK 276

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A + ++ + Q GV PD  TY+ L++ F   G+ + + EL   M   G K  V +
Sbjct: 277 AGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVT 336

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LIN  CK ++ + A  L   M + G  P+VV +N++  GL +  +++   ++++ M 
Sbjct: 337 YSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMML 396

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++  + D  TY   ++GL K G +  AV+LF  ++  +   D  AY+ +I  LC++G+LE
Sbjct: 397 KSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLE 456

Query: 362 IALELFRSLPCGVLVPNVV-TYSIMIGGLCNDGQMDKARDL 401
            A  ++  +   V   N+    + ++  LC+  + D AR +
Sbjct: 457 EACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRI 497



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 215/441 (48%), Gaps = 8/441 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D+  FT L   L   S+  E   LFT L   G      TY  +V+GLC       AL L 
Sbjct: 18  DSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV 77

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            E++        V  P    Y  II GLC+   V  A ++L +M +++I PNV TYT ++
Sbjct: 78  RELSG-------VYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILL 130

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C +     A+ +F EM   G +PN +T+  ++  L + G++DEA R++       + 
Sbjct: 131 NGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELP 190

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            D  T  T++ G C   R++ A +    M  MG +    +YS L++G+ ++ E++  +  
Sbjct: 191 TDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRF 250

Query: 262 YSE-MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           + E    KG   +   +      L +   ++RA K  +E++++GV  D  TY   I+   
Sbjct: 251 FEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFA 310

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G    ++EL   +R    + D+  Y++LI+ LCK  + + A  L   +      PNVV
Sbjct: 311 RAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVV 370

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ GLC  G+MD+   ++  M ++   P+V+T+ +++ G  +       ++L   +
Sbjct: 371 TYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELI 430

Query: 441 KEINVMPDASIVSIVVDLLAK 461
           K     PDA+  S+V+  L +
Sbjct: 431 KSSREGPDAAAYSMVITSLCR 451



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 165/329 (50%), Gaps = 4/329 (1%)

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           TY  V+ G C A   N+A  L  E+   GV  P V  +N I+  LC+  ++ +A ++L+ 
Sbjct: 56  TYKLVVDGLCGAGMANQALELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEK 113

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M++  + P+ FTY  LL+G C + +   A+E+F  M+  GCK    +Y  LI    +  E
Sbjct: 114 MVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGE 173

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           I+ AL +  E  S  +  DV+   T+  GL +  +++ A K  +EM++ GV  +  TY  
Sbjct: 174 IDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSN 233

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKC-EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
            + G  ++G +   +  F   +  K    +  AY   +D LCK+G L+ A +    L   
Sbjct: 234 LVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQS 293

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            +VP+VVTYS++I      GQ D + +L  DM  N V P+V+T+  LI    +  +    
Sbjct: 294 GVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDA 353

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
             LL  M+     P+    + V+D L K+
Sbjct: 354 FRLLELMEAAGSPPNVVTYNSVMDGLCKS 382



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 160/345 (46%), Gaps = 37/345 (10%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           AK L   +++ G + +   F ++  +L +  K  E  RL  L+   GV     TY  ++D
Sbjct: 3   AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C  G  N A EL   +  +    TVF Y+ +I G C+   +  A  +  +M+ + I P
Sbjct: 63  GLCGAGMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +V  +  L  GL   ++ + A ++F EM+RNG   +  TY T I  L + G I EA+ + 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG---- 388
              R L+   D+    +++ GLCK+ RL+ AL+    +    + PN VTYS ++ G    
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 389 --------------------------------LCNDGQMDKARDLFLDMEENAVVPNVIT 416
                                           LC  G +D+AR    ++ ++ VVP+V+T
Sbjct: 242 GELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVT 301

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + MLI  F R  +    +ELL  M+   V PD    S ++++L K
Sbjct: 302 YSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCK 346



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 5/116 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +LKS  +PD VT++ ++ GL     +  A  LF  ++     PD   Y+ ++  LCR   
Sbjct: 395 MLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGK 454

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
              A  ++  M     E  V  +        ++  LC     D A+ ++   +++ 
Sbjct: 455 LEEACGMYHGM-----EVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERG 505


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 229/440 (52%), Gaps = 9/440 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +S    +   ++ +  +P++VT  SLI+G C  +++  A  L  ++   G   +  T
Sbjct: 315 IGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGT 374

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T++++ LC       AL    EM   N       +PN    T ++ GLC+ G   +A E
Sbjct: 375 FTSVIHRLCLKCRFDSALLFIMEMLLRN------FKPNDGLLTLLVSGLCQNGKQSEAIE 428

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++ +K    N VT  ++I G C A    EA +L  EM+++G+  + +++N ++   C
Sbjct: 429 LWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACC 488

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK++E  +L + M++ G++PD +TYN LL G C  G++  A  L+   +  G     +
Sbjct: 489 KEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAY 548

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y I+I+GYCK   +E    L+ EM++  I+ + V++ TL     E   +  AF+L D+M
Sbjct: 549 TYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDM 608

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G+   + TY + I GL   G +  A +L   +R      ++  Y +LI G CK G++
Sbjct: 609 RSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQM 668

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
                + + +    + PN +TY+IMI G C  G M  A  L  +M +  +VP+ +T++ L
Sbjct: 669 HKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNAL 728

Query: 421 IRGFI---RINEPSKVIELL 437
             GF    ++ E  KV +L+
Sbjct: 729 TNGFCKEGKMEEALKVCDLM 748



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 225/491 (45%), Gaps = 41/491 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +  ++ K    P+ VT+ ++I GLC   R+ EA     K+     +P + TY
Sbjct: 211 GRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTY 270

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGL +      A  + +EM++          PN V Y T+IDG C+ G +  A ++
Sbjct: 271 GVLINGLVKLERFDEANCILKEMSDRG------YAPNNVVYNTLIDGYCRIGNISTALQI 324

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG----------------- 164
              M    I PN VT  S+I+G+C +     A+ L  EM+  G                 
Sbjct: 325 RDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCL 384

Query: 165 ------------------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
                              +PN     +++  LC+NGK  EA  L   +++ G   +  T
Sbjct: 385 KCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVT 444

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
            N L+ G C  G    A +L   M   G      SY+ LI   CK  ++E    L  EM+
Sbjct: 445 SNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMV 504

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +GI+PD+  +N L  GL  + ++E A  L+ E ++NG   D +TY   IDG CK   + 
Sbjct: 505 RRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVE 564

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           E  +LF  +  +K E +   Y +LI   C++G +  A  L   +    +     TYS +I
Sbjct: 565 EGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLI 624

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GL N G +D A  L  +M +  + PNV+ +  LI G+ ++ +  KV  +L +M   NV 
Sbjct: 625 HGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVH 684

Query: 447 PDASIVSIVVD 457
           P+    +I+++
Sbjct: 685 PNKITYTIMIN 695



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 229/442 (51%), Gaps = 6/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T   L+  L   + +  +  +F  +   G  PDV+ ++T+VN  C       A+ L
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M     + GV   PN VTY  II GLCK G +D+A +   +M+ + +KP++VTY  +
Sbjct: 220 FRKME----KVGVA--PNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVL 273

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G    + ++EA  +  EM D+G  PN V +N ++D  C+ G +  A ++ D MI +G+
Sbjct: 274 INGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGI 333

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P++ T N+L+ G+C + ++ HA+ L   M + G      +++ +I+  C     + AL 
Sbjct: 334 SPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALL 393

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
              EML +  KP+  +   L  GL +  +   A +L+  +   G AA+T T    I GLC
Sbjct: 394 FIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLC 453

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G   EA +L   +       D  +YN+LI   CK G++E   +L   +    + P++ 
Sbjct: 454 EAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMY 513

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY++++ GLCN G++++A  L+ + ++N   P+  T+ ++I G+ + N   +  +L  +M
Sbjct: 514 TYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
             + +  +A +   ++    +N
Sbjct: 574 VTMKIEQNAVVYGTLIRAYCEN 595



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 215/422 (50%), Gaps = 6/422 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++ H   +L  +L      +  TFTS+I  LC + R   A     ++ +   +P+    T
Sbjct: 352 QMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLT 411

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LV+GLC+      A+ L+  +     E G     NTVT   +I GLC+ G  ++A +LL
Sbjct: 412 LLVSGLCQNGKQSEAIELWYRLL----EKGFAA--NTVTSNALIHGLCEAGSKEEAAKLL 465

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M ++ +  + ++Y ++I   C      E  +L  EM+ +G+QP++ T+N+++  LC  
Sbjct: 466 KEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNM 525

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK++EA  L     ++G  PDA+TY  ++DG+C   RV   ++LF  M +M  +     Y
Sbjct: 526 GKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVY 585

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
             LI  YC+N  +  A  L  +M S+GI      +++L  GL  I  V+ A +L DEM++
Sbjct: 586 GTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRK 645

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G++ +   Y   I G CK G + +   +   + I     +   Y  +I+G CK G ++ 
Sbjct: 646 EGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKA 705

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A +L   +    +VP+ VTY+ +  G C +G+M++A  +   M    +  + IT+  LI 
Sbjct: 706 AAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLID 765

Query: 423 GF 424
           G+
Sbjct: 766 GW 767



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V  GF +   +++    PD  T+  L+ GLC   +I EA  L+ + +  G  PD +TY
Sbjct: 491 GKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTY 550

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV---------CE---------------- 96
             +++G C+ +       LF+EM     E   V         CE                
Sbjct: 551 GIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRS 610

Query: 97  ---PNT-VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              P T  TY+++I GL   G VD A +LL +M+ + + PNVV YT++I G+C     ++
Sbjct: 611 RGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHK 670

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
              +  EM    V PN +T+ ++++  CK G M  A++LL+ M Q G+ PDA TYN L +
Sbjct: 671 VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTN 730

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           GFC  G++  A ++   M + G      +Y+ LI+G+ K
Sbjct: 731 GFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 160/330 (48%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           EL   + +K + P++ T   ++     A +   + ++F  M   GV P+V  F+ +++  
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C  G++D+A  L   M + GV P+  TYN ++ G C  GR++ A +    ME    K ++
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y +LING  K +  + A  +  EM  +G  P+ V++NTL  G   I  +  A ++ D+
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M  NG++ ++ T  + I G CK+  +  A  L   +       +   + S+I  LC   R
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            + AL     +      PN    ++++ GLC +G+  +A +L+  + E     N +T + 
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           LI G        +  +LL +M E  ++ D+
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDS 477



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  N L+  L K+  ++++ ++F  +  CGV  P+V  +S M+   C  G++D A +L
Sbjct: 161 SLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGV-TPDVYLFSTMVNAFCTGGRVDDAIEL 219

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F  ME+  V PNV+T++ +I G  +     +  +   KM++  V P      ++++ L K
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVK 279

Query: 462 NE 463
            E
Sbjct: 280 LE 281



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 34/67 (50%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +L  + +    PDAVT+ +L  G C E ++ EA  +   +   G   D  T
Sbjct: 700 LGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDIT 759

Query: 61  YTTLVNG 67
           YTTL++G
Sbjct: 760 YTTLIDG 766



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 45/101 (44%)

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +  ELF  L    L P++ T + ++  L    ++  +  +F  M    V P+V  F  ++
Sbjct: 145 VVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMV 204

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             F         IEL  KM+++ V P+    + ++  L KN
Sbjct: 205 NAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKN 245


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 224/440 (50%), Gaps = 8/440 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           + PD +  T LIKG      I +A  +   L   G +PDVF Y  +++G C+ +    A 
Sbjct: 6   YQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAK 64

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTY 137
            + + M            P+ VT+  +I   C +G +D A ++  ++ KD N KP ++TY
Sbjct: 65  TVLDRMKRKG------FSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITY 118

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           T +I  +      +EA +L  EM+ +G++P+  T+NVI   LCK GK+D A   +  +  
Sbjct: 119 TILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNS 178

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G +PD  TYN LL      G+ +  ++    + S GC+  V +YSILI+  C++ +IE 
Sbjct: 179 RGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEE 238

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           +++L   M  KG+ PD   ++ L        +++ A +  D M  +G   D   Y T + 
Sbjct: 239 SVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMA 298

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LCKNG    AVE+F  L  + C  ++ +YN+++  L  SG    AL +   +    + P
Sbjct: 299 ALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDP 358

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +V+TY+ +I  LC DG +D+A  L  DM      PN++++  ++ G  + +     IE+L
Sbjct: 359 DVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVL 418

Query: 438 HKMKEINVMPDASIVSIVVD 457
             M E    P+ +  +++++
Sbjct: 419 AAMIENGCQPNETTYTLLIE 438



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 214/400 (53%), Gaps = 7/400 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTY 61
           R+     VL R+ +  F+PD VT   +I   C + +I  A  +F +L +   C+P + TY
Sbjct: 59  RIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITY 118

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+           AL L +EM +         EP+T TY  I  GLCKEG VD+A E 
Sbjct: 119 TILIEAYILEGGIDEALKLLDEMLSRG------LEPDTFTYNVITRGLCKEGKVDRAFEF 172

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  +  +  KP+V+TY  ++R       W+E ++   E+  +G +PNVVT+++++  LC+
Sbjct: 173 VRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCR 232

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +GK++E+  L+ +M + G+ PDA+ Y+ L+  FC  G+++ A E    M   G    + +
Sbjct: 233 DGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVN 292

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++   CKN   + A+ ++ ++   G  P+V  +NT+   L+      RA  +  +M 
Sbjct: 293 YNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQML 352

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  TY + I  LC++G + EA+ L   +   + + +I +Y +++ GLCK+ R++
Sbjct: 353 SKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRID 412

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            A+E+  ++      PN  TY+++I G+   G   +A +L
Sbjct: 413 DAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 214/437 (48%), Gaps = 5/437 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           IL+    PD   + ++I G C  +RI  A  +  +++  G  PDV T+  ++   C    
Sbjct: 35  ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGK 94

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
             +AL +FEE+   N      C+P  +TYT +I+    EG +D+A +LL +M  + ++P+
Sbjct: 95  IDLALKVFEELLKDNN-----CKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPD 149

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             TY  + RG C     + A      +  +G +P+V+T+N+++  L   GK DE  + + 
Sbjct: 150 TFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMS 209

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            +   G  P+  TY+ L+   C  G++  +  L   M+  G     + Y  LI  +C+  
Sbjct: 210 EIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREG 269

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ A+     M+  G  PD+V +NT+   L +    + A ++F ++   G   +  +Y 
Sbjct: 270 KLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYN 329

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T +  L  +G    A+ +   +     + D+  YNSLI  LC+ G ++ A+ L   +  G
Sbjct: 330 TMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSG 389

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              PN+V+Y  ++ GLC   ++D A ++   M EN   PN  T+ +LI G       ++ 
Sbjct: 390 RFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQA 449

Query: 434 IELLHKMKEINVMPDAS 450
           +EL + +  +N + + S
Sbjct: 450 MELANSLYIMNAISEDS 466



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 186/368 (50%), Gaps = 2/368 (0%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           +P+ +  T +I G      +DKA  ++  + +K+ KP+V  Y +VI GFC A     AK 
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRVM-GILEKHGKPDVFAYNAVISGFCKANRIESAKT 65

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD-LMIQHGVRPDAFTYNTLLDGF 214
           +   M  +G  P+VVT N+++   C  GK+D A ++ + L+  +  +P   TY  L++ +
Sbjct: 66  VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
            L G ++ A +L   M S G +   F+Y+++  G CK  +++ A      + S+G KPDV
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +N L   L    + +   K   E+   G   +  TY   I  LC++G I E+V L   
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKV 245

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           ++      D   Y+ LI   C+ G+L++A+E    + C   +P++V Y+ ++  LC +G 
Sbjct: 246 MKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGN 305

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
            D A ++F  ++E    PNV +++ ++       +  + + ++ +M    + PD    + 
Sbjct: 306 GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNS 365

Query: 455 VVDLLAKN 462
           ++  L ++
Sbjct: 366 LISCLCRD 373



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 167/337 (49%), Gaps = 6/337 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L  +L     PD  T+  + +GLC E ++  A      L   GC+PDV TY
Sbjct: 129 GGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITY 188

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+  L              E+      F   CEPN VTY+ +I  LC++G ++++  L
Sbjct: 189 NILLRALLNQGKWDEGEKWMSEI------FSRGCEPNVVTYSILISSLCRDGKIEESVNL 242

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  MK+K + P+   Y  +I  FC     + A      M+  G  P++V +N IM  LCK
Sbjct: 243 VKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCK 302

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG  D A  +   + + G  P+  +YNT+L     +G    A  +   M S G    V +
Sbjct: 303 NGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVIT 362

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+  C++  ++ A+ L ++MLS   +P++V + T+ +GL + H+++ A ++   M 
Sbjct: 363 YNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMI 422

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            NG   +  TY   I+G+  +G   +A+EL ++L I+
Sbjct: 423 ENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIM 459



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 154/304 (50%), Gaps = 2/304 (0%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+ +  QP+V+    ++     +  +D+A+R++ ++ +HG +PD F YN ++ GFC   R
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIHN 278
           +  AK +   M+  G    V +++I+I  +C   +I+ AL ++ E+L     KP ++ + 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L         ++ A KL DEM   G+  DT+TY     GLCK G +  A E   TL   
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            C+ D+  YN L+  L   G+ +   +    +      PNVVTYSI+I  LC DG+++++
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            +L   M+E  + P+   +D LI  F R  +    IE L  M     +PD    + ++  
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 459 LAKN 462
           L KN
Sbjct: 300 LCKN 303


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 229/469 (48%), Gaps = 11/469 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  + +  F+ D  T T +++ LC + R  + +  F ++   G  P+V  Y
Sbjct: 87  GKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNY 146

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T  ++GLC+  +   A ++ EEM  G G      +PN  T+TT+IDGLCK G+ ++A  L
Sbjct: 147 TAWIDGLCKRRYVKQAFHVLEEMV-GRG-----LKPNVYTHTTLIDGLCKIGWTERAFRL 200

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L++ K  + KPNV TYT +I G+C       A+ L + M++QG++PN  T+  ++   C
Sbjct: 201 FLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC 260

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G  D A  L++ M Q G  P+ +TYN ++DGFC  G++  A ++     S G K    
Sbjct: 261 KGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKI 320

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILI  +CK   I  AL L+  M+  G  PD+  + +L     +  Q+E + K FD+ 
Sbjct: 321 TYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKC 380

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     TY + I G CK G    A+ +F  +    C  D   Y +LI GLCK  RL
Sbjct: 381 LMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRL 440

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A  L+  +    LVP  VT   +    C   +   A  +   +++      V T D++
Sbjct: 441 EEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR---QQVHTVDVV 497

Query: 421 IRGFIRINEPSKVIELLHK-MKEINVMPDASIVSIVVDLLAKNEISLNS 468
           +R    + +       L K + E   +  A+    +      N  +L S
Sbjct: 498 VRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALAS 546



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 226/468 (48%), Gaps = 11/468 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P    F +L+   C E ++ E  AL   +  +G   D  T T +V  LC          
Sbjct: 70  SPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 129

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            F  M     E G    PN V YT  IDGLCK  +V +A  +L +M  + +KPNV T+T+
Sbjct: 130 FFRRML----ETGT--PPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 183

Query: 140 VIRGFCYAKDWNE-AKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           +I G C    W E A RLF++++     +PNV T+ V++   C+ GK+  A  LL  M++
Sbjct: 184 LIDGLCKI-GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 242

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G++P+  TY TL+ G C  G  + A EL   M+  G    +++Y+ +I+G+CK  +I+ 
Sbjct: 243 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 302

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  +     S+G+K D + +  L     +   +  A  LFD M  NG   D   Y + I 
Sbjct: 303 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 362

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
             C+   + E+ + F    ++      + Y S+I G CK GR  +AL +F  +       
Sbjct: 363 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFA 422

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + +TY  +I GLC + ++++A+ L+  M +  +VP  +T   L   + R  + S  + +L
Sbjct: 423 DSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVL 482

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESN 485
            ++ +   +    +V  V  L A  ++   SL    V ++   VD + 
Sbjct: 483 DRLDKRQQVHTVDVV--VRKLSALGDVDAASLFLKKVLDEDYAVDHAT 528



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 1/281 (0%)

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++ EA+ ++  M  HG+     T N +L     TG   +A+++F  M   G       +
Sbjct: 17  GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGF 76

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
             L+   C+  ++E   +L + M   G   D      +   L E  + +   + F  M  
Sbjct: 77  GALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 136

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G   +   Y  +IDGLCK  Y+ +A  +   +     + ++  + +LIDGLCK G  E 
Sbjct: 137 TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 196

Query: 363 ALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           A  LF  L       PNV TY++MIGG C +G++ +A  L + M E  + PN  T+  LI
Sbjct: 197 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 256

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            G  +     +  EL++KMK+   +P+    + V+D   K 
Sbjct: 257 GGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKK 297



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPD 57
           +GR +    V  R++++    D++T+ +LI GLC ESR+ EA AL+  +   R+  CE  
Sbjct: 402 VGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCE-- 459

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
             T  TL    CR   T +A+++ + +                T   ++  L   G VD 
Sbjct: 460 -VTRVTLTFEYCRREKTSIAVSVLDRLDK---------RQQVHTVDVVVRKLSALGDVDA 509

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
           A   L ++ D++   +  TYT  I   CY
Sbjct: 510 ASLFLKKVLDEDYAVDHATYTGFINS-CY 537


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 220/406 (54%), Gaps = 8/406 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V ++  ++  +C+      A+ +F EMA         CEP+  TY T++DGLCKE  +
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQK------CEPDVFTYCTLMDGLCKEDRI 239

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A  LL +M+ +   P+ VT+  +I G C   D     +L   M  +G  PN VT+N I
Sbjct: 240 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 299

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++ LC  GK+D+A  LLD M+     P+  TY TL++G    GR      L  S+E  G 
Sbjct: 300 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 359

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
               ++YS LI+G  K ++ E A+ L+ +M+ KG +P++V+++ L  GL    +++ A +
Sbjct: 360 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 419

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +  EM   G   + +TY + I G  K G   +A+ ++  +    C  +   Y+ LI GLC
Sbjct: 420 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 479

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM--EENAVVPN 413
           + G+L  A+ ++  +    L P+VV YS MI GLCN G ++    LF +M  +E+   P+
Sbjct: 480 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPD 539

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           V+T+++L+R   + N  S  I+LL+ M +    PD    +I ++ L
Sbjct: 540 VVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 191/371 (51%), Gaps = 43/371 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+ +L+ GLC E RI EA  L  ++++ GC P   T+  L+NGLC+    +    L
Sbjct: 221 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKL 280

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M      F   C PN VTY TII+GLC +G +DKA  LL +M      PN VTY ++
Sbjct: 281 VDNM------FLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTL 334

Query: 141 IRGFC--------------------YAKDW---------------NEAKRLFIEMMDQGV 165
           I G                      +A ++                EA  L+ +M+++G 
Sbjct: 335 INGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGC 394

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           QPN+V ++ ++D LC+ GK+DEA  +L  M+  G  P+AFTY++L+ GF  TG    A  
Sbjct: 395 QPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 454

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           ++  M    C      YS+LI+G C++ ++  A+ +++ ML +G++PDVV ++++  GL 
Sbjct: 455 VWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLC 514

Query: 286 EIHQVERAFKLFDEM--QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
               VE   KLF+EM  Q +    D  TY   +  LCK   I  A++L +++    C  D
Sbjct: 515 NAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPD 574

Query: 344 IRAYNSLIDGL 354
           +   N  ++ L
Sbjct: 575 LITCNIFLNAL 585



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 115/201 (57%), Gaps = 9/201 (4%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C  P+ V +++LI GLC E ++ EA  +  ++   GC P+ FTY++L+ G  +T ++ 
Sbjct: 392 KGC-QPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 450

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A+ +++EMA  N      C PN + Y+ +I GLC++G + +A  +   M  + ++P+VV
Sbjct: 451 KAIRVWKEMAKNN------CVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVV 504

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQ--GVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            Y+S+I G C A       +LF EM+ Q    QP+VVT+N+++  LCK   +  A  LL+
Sbjct: 505 AYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLN 564

Query: 194 LMIQHGVRPDAFTYNTLLDGF 214
            M+  G  PD  T N  L+  
Sbjct: 565 SMLDRGCNPDLITCNIFLNAL 585



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 133/279 (47%), Gaps = 9/279 (3%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF---SYSILINGYCKNKEIEGALSLY 262
           T+ +L++ +  +G       LF   + M  +  VF   ++ ++   Y K    E A+ L+
Sbjct: 82  TFYSLIENYANSGDFG---TLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELF 138

Query: 263 SEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFD--EMQRNGVAADTWTYRTFIDGL 319
             M+ +   +  V   N++   + +     RA + ++     +  ++ +  ++   I  +
Sbjct: 139 GRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAM 198

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G +  A+E+F  + I KCE D+  Y +L+DGLCK  R++ A+ L   +      P+ 
Sbjct: 199 CKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSS 258

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++++I GLC  G M +   L  +M     VPN +T++ +I G     +  K + LL +
Sbjct: 259 VTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 318

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           M     +P+      +++ L K   S++ +   +  E++
Sbjct: 319 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 357


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 237/480 (49%), Gaps = 41/480 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R      +   I++S   PD   +   I+       +  A  L T ++  G  P VF Y 
Sbjct: 162 RYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYN 221

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++ GLC+      A  LF+EM +          PN +TY T+IDG CK G +++A  + 
Sbjct: 222 VVIGGLCKEKRMKDAEKLFDEMLDRR------VAPNRITYNTLIDGYCKVGQLEEAFNIR 275

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF---------- 172
            +MK +N++P ++T+ S++ G C A+   EA+R+  EM   G  P+  T+          
Sbjct: 276 ERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKC 335

Query: 173 -------------------------NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                                    +++++ LCK G M++A  +L   +++G+ P    +
Sbjct: 336 GNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFF 395

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           NT+++G+C  G +N A      ME++G +    +Y+ L+  +C+ K +E A     +M+ 
Sbjct: 396 NTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVE 455

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           KG+ P+V  +NTL  G       +R F++ +EM++ G+  +  +Y   I+ LCK+  I+E
Sbjct: 456 KGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILE 515

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  +   +       + + YN LIDG C +G+L+ A   F  +    +VP +VTY+I+I 
Sbjct: 516 AEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILIN 575

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           GLC  G++ +A +L  ++    +  +VIT++ LI G+       K +EL   MK+  + P
Sbjct: 576 GLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKP 635



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 230/448 (51%), Gaps = 7/448 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   F +  R+      P  +TF SL+ GLC    + EA  +  ++ V+G  PD FT
Sbjct: 265 VGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFT 324

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL +G  +  +   ++ L EE      +          T + +++ LCKEG ++KA+E
Sbjct: 325 YTTLFDGHLKCGNVDASITLSEEAVRKGVQI------LDYTCSILLNALCKEGNMEKAEE 378

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L +  +  + P  V + +++ G+C   D N+A     +M   G++PN VT+N ++ + C
Sbjct: 379 VLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFC 438

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +   M+EA + +  M++ GV P+  TYNTL+DG+  +   +   ++   ME  G K  V 
Sbjct: 439 EMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVI 498

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY  LIN  CK+  I  A  +  +M+ +G+ P+  I+N L  G     +++ AF+ FDEM
Sbjct: 499 SYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEM 558

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +     TY   I+GLCK G ++EA  L   +      FD+  YNSLI G   +G +
Sbjct: 559 VAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNV 618

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + ALEL+ ++    + P + TY  +I G C    +     ++ +M +  +VP+ + ++ L
Sbjct: 619 QKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNAL 677

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD 448
           I  ++   +  K   L   M+   + PD
Sbjct: 678 IHCYVEHGDVQKACSLHSAMEAQGIQPD 705



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 192/424 (45%), Gaps = 42/424 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G ++  +  + ++      P+ VT+ SL+K  C    + EA     K+   G  P+V T
Sbjct: 405 VGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVET 464

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G  R+        + EEM           +PN ++Y  +I+ LCK+  + +A+ 
Sbjct: 465 YNTLIDGYGRSCLFDRCFQILEEMEKKG------LKPNVISYGCLINCLCKDANILEAEV 518

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  M  + + PN   Y  +I G C A    +A R F EM+ + + P +VT+N++++ LC
Sbjct: 519 ILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLC 578

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  L   + + G+  D  TYN+L+ G+   G V  A EL+ +M+  G K T+ 
Sbjct: 579 KKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLN 638

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI G C  + +     +Y EML   + PD VI+N L     E   V++A  L   M
Sbjct: 639 TYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAM 697

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G+  D  TY                                   N LI G  K GR+
Sbjct: 698 EAQGIQPDKMTY-----------------------------------NCLILGHFKEGRM 722

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
                L   +    L+P   TY I+I G C     D A   + +M EN   P+V   D L
Sbjct: 723 HKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNL 782

Query: 421 IRGF 424
           I G 
Sbjct: 783 ITGL 786



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 202/444 (45%), Gaps = 42/444 (9%)

Query: 20  TPDAVTFTSLIKGLCAESRIM-EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           TP    F+ ++  +C+ES+++ E+A L+  ++  G  P V +    +  L  T      L
Sbjct: 108 TPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTL 167

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF E+     E G+   P+   Y   I    K G + +A EL+  MK            
Sbjct: 168 QLFSEIV----ESGL--RPDQFMYGKAIQAAVKLGDLKRAIELMTCMK------------ 209

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
              RG                    GV P V  +NV++  LCK  +M +A +L D M+  
Sbjct: 210 ---RG--------------------GVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDR 246

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            V P+  TYNTL+DG+C  G++  A  +   M+    + T+ +++ L+NG C+ + +E A
Sbjct: 247 RVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEA 306

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             +  EM   G  PD   + TLF G  +   V+ +  L +E  R GV    +T    ++ 
Sbjct: 307 QRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNA 366

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G + +A E+               +N++++G C+ G +  A      +    L PN
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPN 426

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VTY+ ++   C    M++A      M E  V+PNV T++ LI G+ R     +  ++L 
Sbjct: 427 HVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILE 486

Query: 439 KMKEINVMPDASIVSIVVDLLAKN 462
           +M++  + P+      +++ L K+
Sbjct: 487 EMEKKGLKPNVISYGCLINCLCKD 510



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 178/370 (48%), Gaps = 5/370 (1%)

Query: 91  FGVVCEPNTVTYTTIIDGLCKEG-FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
           F +   P    ++ ++  +C E   V ++ EL + MK   + P+V +    +      K 
Sbjct: 103 FSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKR 162

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
           + +  +LF E+++ G++P+   +   +    K G +  A  L+  M + GV P  F YN 
Sbjct: 163 YEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNV 222

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           ++ G C   R+  A++LF  M          +Y+ LI+GYCK  ++E A ++   M  + 
Sbjct: 223 VIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           ++P ++  N+L  GL     +E A ++ +EM+  G   D +TY T  DG  K G +  ++
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASI 342

Query: 330 ELFHTLRILKCEFDIRAYNS--LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
            L  +   ++    I  Y    L++ LCK G +E A E+ +      L P  V ++ ++ 
Sbjct: 343 TL--SEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVN 400

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           G C  G ++KA      ME   + PN +T++ L++ F  +    +  + + KM E  V+P
Sbjct: 401 GYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLP 460

Query: 448 DASIVSIVVD 457
           +    + ++D
Sbjct: 461 NVETYNTLID 470



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 7/296 (2%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           V+LG ++     P+A  +  LI G C   ++ +A   F ++      P + TY  L+NGL
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C+    + A NL  E+      F V+      TY ++I G    G V KA EL   MK  
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVI------TYNSLISGYSSAGNVQKALELYETMKKS 631

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            IKP + TY  +I G C  +     ++++ EM+   + P+ V +N ++    ++G + +A
Sbjct: 632 GIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKA 690

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L   M   G++PD  TYN L+ G    GR++  K L   M+  G      +Y ILI G
Sbjct: 691 CSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVG 750

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +CK K+ +GA   Y EM   G  P V I + L  GL E  +   A  +  EM   G
Sbjct: 751 HCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 230/447 (51%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +  ++L     P+ VT+  L+ GLC   R+ E   L  ++      PD FTY
Sbjct: 243 GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTY 302

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L +GL RT  +   L+LF E        G        T + +++GLCK+G V KA+++
Sbjct: 303 SILFDGLTRTGESRTMLSLFAESLKKGVMLGAY------TCSILLNGLCKDGKVAKAEQV 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  +    + P  V Y ++I G+C  +D   A  +F +M  + ++P+ +T+N +++ LCK
Sbjct: 357 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + +A  L+  M + GV P   T+NTL+D +   G++     +   M+  G K  V S
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +  ++  +CKN +I  A+++  +M+ K + P+  ++N++     E    E+AF L ++M+
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 536

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +GV+A   TY   + GLC++  I EA EL +TLR      D+ +YN++I   C  G  +
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 596

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALEL + +    + P + TY  ++  L + G++     L+  M    V P+   + +++
Sbjct: 597 KALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
             ++R    SKV  L  +M E  +  D
Sbjct: 657 DAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 237/497 (47%), Gaps = 43/497 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEP-DV 58
           +GR +      G ++ +   PD   +  +++   A   +  A A+  ++ R  G  P D 
Sbjct: 135 VGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDA 194

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           F+Y  ++ GL R+     AL +F+EM     + GVV  PN +TY T+IDG  K G ++  
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMV----DMGVV--PNWITYNTMIDGHVKGGDLEAG 248

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK------------------------ 154
             L  QM     KPN+VTY  ++ G C A   +E +                        
Sbjct: 249 FRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDG 308

Query: 155 -----------RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
                       LF E + +GV     T +++++ LCK+GK+ +A ++L++++  G+ P 
Sbjct: 309 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 368

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
              YNTL++G+C    +  A  +F  M+S   +    +Y+ LING CK + +  A  L  
Sbjct: 369 TVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVM 428

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM   G+ P V   NTL        Q+E+ F +  +MQ+ G+ +D  ++ + +   CKNG
Sbjct: 429 EMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNG 488

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            I EAV +   +       + + YNS+ID   +SG  E A  L   +    +  ++VTY+
Sbjct: 489 KIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYN 548

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           +++ GLC   Q+D+A +L   +    + P+V++++ +I       +  K +ELL +M + 
Sbjct: 549 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 608

Query: 444 NVMPDASIVSIVVDLLA 460
            + P       +V  LA
Sbjct: 609 GIRPTLRTYHTLVSALA 625



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 149/301 (49%), Gaps = 4/301 (1%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P++ + N++++ L   G+  +      L++  G RPD F +N ++      G ++ A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 227 FVSM-ESMGCKHT-VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
              M  S G      FSY+++I G  ++ +   AL ++ EM+  G+ P+ + +NT+  G 
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +   +E  F+L D+M  +G   +  TY   + GLC+ G + E   L   +       D 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 345 RAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
             Y+ L DGL ++G     L LF  SL  GV++    T SI++ GLC DG++ KA  +  
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVML-GAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +    +VP  + ++ LI G+ ++ +      +  +MK  ++ PD    + +++ L K E
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 464 I 464
           +
Sbjct: 419 M 419



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 11/205 (5%)

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           ++++ + LFVG      V  AF L   +   G   DT+ +   +      G +  A+ + 
Sbjct: 126 NLLLESLLFVGRHA--DVRAAFGL---LVAAGARPDTFAWNKVVQACVAAGDLDVALAMV 180

Query: 333 HTLRILKCEF----DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
              R+ + E     D  +YN +I GL +SG+   AL++F  +    +VPN +TY+ MI G
Sbjct: 181 R--RMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               G ++    L   M  +   PN++T+++L+ G  R     +   L+ +M   ++ PD
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFT 473
               SI+ D L +   S   L  F 
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFA 323


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 246/465 (52%), Gaps = 24/465 (5%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L R L   +TP    +  +I GLC  SR+M+A  +  K+      P+VFTYT L+NGLCR
Sbjct: 76  LVRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCR 135

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
           ++ T +A  +F+EM   NG     C+PN +TY T+I  L + G +D+A  ++++ +   +
Sbjct: 136 SNKTKLAREVFQEMKR-NG-----CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLEL 189

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
             +V+T T+++ G C A   ++A +   EM   GV+PN VT++ ++    ++G++D   R
Sbjct: 190 PTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIR 249

Query: 191 LLDL-MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
             +    + G   +A  Y   LD  C  G ++ A++    +   G    V +YS+LIN +
Sbjct: 250 FFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTF 309

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +  + + +L L  +M   G+KPDVV ++TL   L +  + + AF+L + M+  G   + 
Sbjct: 310 ARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNV 369

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + +DGLCK+G + E   ++  +   +C  D+  Y+ +++GL K+G L+ A++LF  
Sbjct: 370 VTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFEL 429

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---- 425
           +      P+   YS++I  LC  G++++A  ++  ME      N+      + G +    
Sbjct: 430 IKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICR---ALAGLVAALC 486

Query: 426 ---RINEPSKVIELL----HKMKEINVMPDASIVSIVVDLLAKNE 463
              R +   +++E+     H+M +     D  +V IV D L +++
Sbjct: 487 DAERTDSARRIVEVASERGHRMTKSG---DTDLVKIVEDHLLESK 528



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 212/456 (46%), Gaps = 30/456 (6%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D+  FT L   L   S+  E   LFT L   G      TY  +V+GLC       AL L 
Sbjct: 18  DSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV 77

Query: 82  EEMAN--------GNGEFGVVCE--------------------PNTVTYTTIIDGLCKEG 113
            E++          NG    +C                     PN  TYT +++GLC+  
Sbjct: 78  RELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSN 137

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
               A+E+  +MK    KPN +TY ++I+    A + +EA R+ IE     +  +V+T  
Sbjct: 138 KTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCT 197

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            I+  LCK  ++D+A + ++ M Q GVRP+  TY+ L+ GF   G ++     F   ++ 
Sbjct: 198 TIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKAR 257

Query: 234 -GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G      +Y   ++  CK   ++ A     E+   G+ PDVV ++ L        Q + 
Sbjct: 258 KGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDA 317

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           + +L ++M+RNGV  D  TY T I+ LCK     +A  L   +       ++  YNS++D
Sbjct: 318 SLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMD 377

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GLCKSG+++    ++  +      P+VVTYSI++ GL   G +D A  LF  ++ +   P
Sbjct: 378 GLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +   + M+I    R  +  +   + H M E+ V  D
Sbjct: 438 DAAAYSMVITSLCRAGKLEEACGMYHGM-EVTVAGD 472



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 208/401 (51%), Gaps = 8/401 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV   + VL ++++    P+  T+T L+ GLC  ++   A  +F +++  GC+P+  TY 
Sbjct: 103 RVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYG 162

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+  L R      AL +  E      +  +    + +T TTI+ GLCK   +D A + +
Sbjct: 163 TLIQHLSRAGEIDEALRVMIE------QRSLELPTDVITCTTIVGGLCKASRLDDALKFM 216

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF-IEMMDQGVQPNVVTFNVIMDELCK 181
            +M+   ++PN VTY++++ GF    + +   R F  E   +G       +   +D LCK
Sbjct: 217 EEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCK 276

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A + ++ + Q GV PD  TY+ L++ F   G+ + + EL   M   G K  V +
Sbjct: 277 AGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVT 336

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LIN  CK ++ + A  L   M + G  P+VV +N++  GL +  +++   ++++ M 
Sbjct: 337 YSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMML 396

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++  + D  TY   ++GL K G +  AV+LF  ++  +   D  AY+ +I  LC++G+LE
Sbjct: 397 KSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLE 456

Query: 362 IALELFRSLPCGVLVPNVV-TYSIMIGGLCNDGQMDKARDL 401
            A  ++  +   V   N+    + ++  LC+  + D AR +
Sbjct: 457 EACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRI 497



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 171/380 (45%), Gaps = 35/380 (9%)

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           AK L   + +  +K +   +T +         ++E  RLF  +  +GV     T+ +++D
Sbjct: 3   AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 178 ELCKNGKMDE----------------------------ASRLLDL------MIQHGVRPD 203
            LC  G  ++                            ASR++D       M++  + P+
Sbjct: 63  GLCGAGMANQALELVRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPN 122

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
            FTY  LL+G C + +   A+E+F  M+  GCK    +Y  LI    +  EI+ AL +  
Sbjct: 123 VFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMI 182

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           E  S  +  DV+   T+  GL +  +++ A K  +EM++ GV  +  TY   + G  ++G
Sbjct: 183 EQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHG 242

Query: 324 YIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
            +   +  F   +  K    +  AY   +D LCK+G L+ A +    L    +VP+VVTY
Sbjct: 243 ELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTY 302

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           S++I      GQ D + +L  DM  N V P+V+T+  LI    +  +      LL  M+ 
Sbjct: 303 SMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEA 362

Query: 443 INVMPDASIVSIVVDLLAKN 462
               P+    + V+D L K+
Sbjct: 363 AGSPPNVVTYNSVMDGLCKS 382


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 215/422 (50%), Gaps = 10/422 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  + +  F+ D  T T +++ LC + R  + +  F ++   G  P+V  Y
Sbjct: 195 GKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNY 254

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T  ++GLC+  +   A ++ EEM  G G      +PN  T+TT+IDGLCK G+ ++A  L
Sbjct: 255 TAWIDGLCKRRYVKQAFHVLEEMV-GRG-----LKPNVYTHTTLIDGLCKIGWTERAFRL 308

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L++ K  + KPNV TYT +I G+C       A+ L + M++QG++PN  T+  ++   C
Sbjct: 309 FLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC 368

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G  D A  L++ M Q G  P+ +TYN ++DGFC  G++  A ++     S G K    
Sbjct: 369 KGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKI 428

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILI  +CK   I  AL L+  M+  G  PD+  + +L     +  Q+E + K FD+ 
Sbjct: 429 TYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKC 488

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     TY + I G CK G    A+ +F  +    C  D   Y +LI GLCK  RL
Sbjct: 489 LMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRL 548

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A  L+  +    LVP  VT   +    C   +   A  +   +++      V T D++
Sbjct: 549 EEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ---QVHTVDVV 605

Query: 421 IR 422
           +R
Sbjct: 606 VR 607



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 227/467 (48%), Gaps = 11/467 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  +F +L+   C E ++ E  AL   +  +G   D  T T +V  LC           
Sbjct: 179 PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 238

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  M     E G    PN V YT  IDGLCK  +V +A  +L +M  + +KPNV T+T++
Sbjct: 239 FRRML----ETGT--PPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 292

Query: 141 IRGFCYAKDWNE-AKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           I G C    W E A RLF++++     +PNV T+ V++   C+ GK+  A  LL  M++ 
Sbjct: 293 IDGLCKI-GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 351

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G++P+  TY TL+ G C  G  + A EL   M+  G    +++Y+ +I+G+CK  +I+ A
Sbjct: 352 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 411

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             +     S+G+K D + +  L     +   +  A  LFD M  NG   D   Y + I  
Sbjct: 412 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 471

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+   + E+ + F    ++      + Y S+I G CK GR  +AL +F  +       +
Sbjct: 472 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFAD 531

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            +TY  +I GLC + ++++A+ L+  M +  +VP  +T   L   + R  + S  + +L 
Sbjct: 532 SITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLD 591

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESN 485
           ++ +   +    +V  V  L A  ++   SL    V ++   VD + 
Sbjct: 592 RLDKRQQVHTVDVV--VRKLSALGDVDAASLFLKKVLDEDYAVDHAT 636



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 203/425 (47%), Gaps = 7/425 (1%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           R+ EAA +  ++R  G    V T   ++     T   + A  +F+ M         VC P
Sbjct: 126 RLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG-----VC-P 179

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           +  ++  ++   C+EG V++   LL  M       +  T T V+R  C    + +    F
Sbjct: 180 DERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFF 239

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M++ G  PNVV +   +D LCK   + +A  +L+ M+  G++P+ +T+ TL+DG C  
Sbjct: 240 RRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKI 299

Query: 218 GRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           G    A  LF+ + +S   K  V +Y+++I GYC+  ++  A  L   M+ +G+KP+   
Sbjct: 300 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNT 359

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + TL  G  +    +RAF+L ++M++ G   + +TY   IDG CK G I EA ++     
Sbjct: 360 YTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMAT 419

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               +FD   Y  LI   CK G +  AL+LF  +      P++  Y+ +I   C   QM+
Sbjct: 420 SQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQME 479

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +++  F       ++P   T+  +I G+ ++   +  + +  +M +     D+     ++
Sbjct: 480 ESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALI 539

Query: 457 DLLAK 461
             L K
Sbjct: 540 SGLCK 544



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 171/379 (45%), Gaps = 36/379 (9%)

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           ++    + G + +A +++L+M+   +   V T   V+R       +  A+++F  M   G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V P+  +F  ++   C+ GK++E   LL  M ++G   D  T   ++   C  GR     
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           E F  M   G    V +Y+  I+G CK + ++ A  +  EM+ +G+KP+V  H TL  GL
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 285 FEIHQVERAFKLFDE------------------------------------MQRNGVAAD 308
            +I   ERAF+LF +                                    M   G+  +
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T TY T I G CK G    A EL + ++      +I  YN++IDG CK G+++ A ++ R
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
                 L  + +TY+I+I   C  G +  A DLF  M EN   P++  +  LI  + +  
Sbjct: 417 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 476

Query: 429 EPSKVIELLHKMKEINVMP 447
           +  +  +   K   I ++P
Sbjct: 477 QMEESQKFFDKCLMIGLLP 495



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 7/304 (2%)

Query: 1   MGRVSHGFVVLGRILKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +G     F +  +++KS  + P+  T+T +I G C E ++  A  L  ++   G +P+  
Sbjct: 299 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 358

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TYTTL+ G C+      A  L  +M     + G +  PN  TY  +IDG CK+G + +A 
Sbjct: 359 TYTTLIGGHCKGGSFDRAFELMNKMK----QEGFL--PNIYTYNAVIDGFCKKGKIQEAY 412

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           ++L     + +K + +TYT +I   C       A  LF  M++ G  P++  +  ++   
Sbjct: 413 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 472

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+  +M+E+ +  D  +  G+ P   TY +++ G+C  GR   A  +F  M   GC    
Sbjct: 473 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADS 532

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y  LI+G CK   +E A +LY  ML K + P  V   TL        +   A  + D 
Sbjct: 533 ITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDR 592

Query: 300 MQRN 303
           + + 
Sbjct: 593 LDKR 596


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 227/466 (48%), Gaps = 48/466 (10%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           LK+    DAV+  +L+ G C +  + +A  +    R  G   +V TYT L++G CR+   
Sbjct: 142 LKASGAADAVSHNTLVAGYCRDGSLGDAERVVEAARASG-TANVVTYTALIDGYCRSGRL 200

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             AL L   M            P+T TY T++ GLC     ++A+EL+ +M   +  PN 
Sbjct: 201 ADALRLIASMPVA---------PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNE 251

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           VT+ + IR FC     + A  L  +M   G  P+V+ ++ +++   ++G++DEA +LL+ 
Sbjct: 252 VTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNT 311

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+    RP+   YN  L G C+ GR     EL   M    C     ++S LIN  C+N+ 
Sbjct: 312 ML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRL 368

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF-------DEMQRNGV-- 305
           +E A+ +  +M   G  PDVV +NT+     +  + + A KL        D +  N V  
Sbjct: 369 VEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLK 428

Query: 306 ---AADTW--------------------TYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
               A  W                    T+   ID LC+NG + +A+E+F  +   +C  
Sbjct: 429 CLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMP 488

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           DI  Y+SLI+G  + G  E+A +LFRS+PC     ++ +Y+  + GLC   + D A +L 
Sbjct: 489 DIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELI 545

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            DM     +PN +TF++LI    +    ++ I++  +M +  + PD
Sbjct: 546 ADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPD 591



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 205/435 (47%), Gaps = 19/435 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I  SC  P+ VTF + I+  C    +  A  L  ++  +GC PDV  Y+TLVNG      
Sbjct: 243 IRNSCH-PNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGR 301

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL L   M         +C PNTV Y   + GLC  G  ++  EL+ +M  K+  PN
Sbjct: 302 VDEALKLLNTM---------LCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPN 352

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             T++++I   C  +    A  +  +M   G  P+VV++N I+       + D+A +LL 
Sbjct: 353 DATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLK 412

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M+    +PD  ++N +L   C   R   A EL   M    C+    +++ILI+  C+N 
Sbjct: 413 SML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNG 469

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ A+ ++  M      PD+V +++L  G  E    E AF LF  M      AD ++Y 
Sbjct: 470 QVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYN 526

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             + GLC      +A EL   +    C  +   +N LI  LC+ G +  A++++  +P  
Sbjct: 527 ATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKY 586

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + P++ TY+ +I G    G++D A      M      P+ I+++ +++G  R       
Sbjct: 587 GITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDA 643

Query: 434 IELLHKMKEINVMPD 448
            +L+ +M   N  P+
Sbjct: 644 EKLVTEMLRKNCTPN 658



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 202/381 (53%), Gaps = 18/381 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +L     P+ V + + +KGLC   R  E   L  ++    C P+  T+
Sbjct: 300 GRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATF 356

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+N LC+      A+ + E+M     ++G +  P+ V+Y TII     +   D A +L
Sbjct: 357 STLINSLCQNRLVEYAVEVLEQMQ----KYGYM--PDVVSYNTIISCFSDQARADDALKL 410

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M     KP+ +++ +V++  C AK W +A  L  +M+ +  + N +TFN+++D LC+
Sbjct: 411 LKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQ 467

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++ +A  + +LM ++   PD  TY++L++GF   G    A +LF    SM C+  +FS
Sbjct: 468 NGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLF---RSMPCRADIFS 524

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  + G C     + A  L ++M+++   P+ V  N L   L +   V RA  ++++M 
Sbjct: 525 YNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMP 584

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+  D +TY   I+G  + G + +A++   T+    CE D  +YNS++ GLC++ R +
Sbjct: 585 KYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWK 641

Query: 362 IALELFRSLPCGVLVPNVVTY 382
            A +L   +      PN VT+
Sbjct: 642 DAEKLVTEMLRKNCTPNEVTF 662



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 147/274 (53%), Gaps = 16/274 (5%)

Query: 13  RILKSCF-TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
           ++LKS    PD ++F +++K LC   R  +A  L  K+    C  +  T+  L++ LC+ 
Sbjct: 409 KLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQN 468

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                A+ +FE M          C P+ VTY+++I+G  ++G  + A +L   M     +
Sbjct: 469 GQVKDAIEVFELMPKYR------CMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CR 519

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
            ++ +Y + ++G C A  W++A  L  +M+ +   PN VTFN+++  LC+ G ++ A  +
Sbjct: 520 ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDV 579

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            + M ++G+ PD FTYN L++G+   GR++ A +    + +M C+    SY+ ++ G C+
Sbjct: 580 YEQMPKYGITPDIFTYNALINGYSEQGRLDDALKF---LSTMPCEPDTISYNSILKGLCR 636

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVI---HNTLFV 282
            +  + A  L +EML K   P+ V     N LF+
Sbjct: 637 AERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFI 670



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 14/236 (5%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++ ++LK     + +TF  LI  LC   ++ +A  +F  +  + C PD+ TY++L+NG  
Sbjct: 442 LVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFS 501

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                 +A +LF  M          C  +  +Y   + GLC     D A EL+  M  ++
Sbjct: 502 EQGLDEMAFDLFRSMP---------CRADIFSYNATLKGLCMAARWDDAGELIADMVTED 552

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PN VT+  +I   C     N A  ++ +M   G+ P++ T+N +++   + G++D+A 
Sbjct: 553 CLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDAL 612

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC--KHTVFSYS 243
           + L  M      PD  +YN++L G C   R   A++L   M    C      F Y+
Sbjct: 613 KFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYA 665



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 43/298 (14%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P V++ N+++ +LC   ++ +A R+L+ +   G   DA ++NTL+ G+C  G +  A+ +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
             +  + G  + V +Y+ LI+GYC++  +  AL L + M                     
Sbjct: 173 VEAARASGTANVV-TYTALIDGYCRSGRLADALRLIASM--------------------- 210

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                             VA DT+TY T + GLC      +A EL   +    C  +   
Sbjct: 211 -----------------PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVT 253

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           + + I   C++G L+ A+EL   +P     P+V+ YS ++ G    G++D+A  L   M 
Sbjct: 254 FATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM- 312

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
                PN + ++  ++G        +V EL+ +M   +  P+ +  S +++ L +N +
Sbjct: 313 --LCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRL 368


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 231/439 (52%), Gaps = 6/439 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       ++  ++     P  VT+ S++KGLC      +A  +F ++  FG  PDV ++
Sbjct: 144 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF 203

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ G CR      AL +++EM +         +P+ V+++ +I    + G +D A   
Sbjct: 204 TILIGGFCRVGEIEEALKIYKEMRHRG------IKPDLVSFSCLIGLFARRGKMDHAMAY 257

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   + P+ V YT VI GFC A   ++A R+  EM+  G  P+VVT+N +++ LCK
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 317

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ +A  LL+ M + GV PD  T+ TL+ G+C+ G+++ A +LF +M +   +  + +
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G C+  +++ A  L+ +M S+ I P+ V ++ L     E  QVE AF   DEM 
Sbjct: 378 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 437

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  +  TY + I G C++G + +  +    + + K   D+  YN+LI G  K  ++ 
Sbjct: 438 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 497

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +L   +    + P+VVTY+++I G    G + +A  +F  M    + P+  T+  +I
Sbjct: 498 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 557

Query: 422 RGFIRINEPSKVIELLHKM 440
            G +      +  +L  +M
Sbjct: 558 NGHVTAGNSKEAFQLHDEM 576



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 225/433 (51%), Gaps = 6/433 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T   ++   C      +  A+ +++      PDV T+  +V+   R      A+ L + M
Sbjct: 97  TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            +         +P  VTY +++ GLC+ G  DKA E+  +M D  + P+V ++T +I GF
Sbjct: 157 VSKG------LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGF 210

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C   +  EA +++ EM  +G++P++V+F+ ++    + GKMD A   L  M   G+ PD 
Sbjct: 211 CRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 270

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             Y  ++ GFC  G ++ A  +   M   GC   V +Y+ L+NG CK + +  A  L +E
Sbjct: 271 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 330

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  +G+ PD+    TL  G     ++++A +LFD M    +  D  TY T IDG+C+ G 
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + +A +L+  +   +   +   Y+ LID  C+ G++E A      +    ++PN++TY+ 
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I G C  G + K +     M  N V P++IT++ LI G+I+ ++     +LL+ M++  
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510

Query: 445 VMPDASIVSIVVD 457
           V PD    +++++
Sbjct: 511 VQPDVVTYNMLIN 523



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 192/366 (52%), Gaps = 6/366 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +   +      PD V+F+ LI       ++  A A   ++R FG  PD   
Sbjct: 213 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 272

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT ++ G CR      AL + +EM       G  C P+ VTY T+++GLCKE  +  A+ 
Sbjct: 273 YTMVIGGFCRAGLMSDALRVRDEMV------GCGCLPDVVTYNTLLNGLCKERRLLDAEG 326

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M+++ + P++ T+T++I G+C     ++A +LF  M++Q ++P++VT+N ++D +C
Sbjct: 327 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 386

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G +D+A+ L D M    + P+  TY+ L+D  C  G+V  A      M + G    + 
Sbjct: 387 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I GYC++  +        +M+   + PD++ +NTL  G  +  ++  AFKL + M
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 506

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           ++  V  D  TY   I+G   +G + EA  +F  +     E D   Y S+I+G   +G  
Sbjct: 507 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 566

Query: 361 EIALEL 366
           + A +L
Sbjct: 567 KEAFQL 572



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 210/439 (47%), Gaps = 6/439 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++  +L S  TP    F  LI+      +  EA   F  +              L+  L 
Sbjct: 12  IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALS 71

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R     +A + +  + + N E       NT T   ++   CK    DK   ++ +M+ + 
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEV------NTYTLNIMVHNYCKALEFDKVDAVISEMEKRC 125

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+VVT+  ++     A D   A  L   M+ +G++P +VT+N ++  LC++G  D+A 
Sbjct: 126 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAW 185

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +   M   GV PD  ++  L+ GFC  G +  A +++  M   G K  + S+S LI  +
Sbjct: 186 EVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF 245

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +  +++ A++   EM   G+ PD VI+  +  G      +  A ++ DEM   G   D 
Sbjct: 246 ARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDV 305

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY T ++GLCK   +++A  L + +R      D+  + +LI G C  G+L+ AL+LF +
Sbjct: 306 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 365

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    L P++VTY+ +I G+C  G +DKA DL+ DM    + PN +T+ +LI       +
Sbjct: 366 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 425

Query: 430 PSKVIELLHKMKEINVMPD 448
                  L +M    ++P+
Sbjct: 426 VEDAFGFLDEMINKGILPN 444



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 162/284 (57%), Gaps = 6/284 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ +L+ GLC E R+++A  L  ++R  G  PD+ T+TTL++G C       AL L
Sbjct: 303 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 362

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+ M N          P+ VTY T+IDG+C++G +DKA +L   M  + I PN VTY+ +
Sbjct: 363 FDTMLNQR------LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 416

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      +A     EM+++G+ PN++T+N I+   C++G + +  + L  M+ + V
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TYNTL+ G+    +++ A +L   ME    +  V +Y++LING+  +  ++ A  
Sbjct: 477 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 536

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           ++ +M +KGI+PD   + ++  G       + AF+L DEM + G
Sbjct: 537 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 179/330 (54%), Gaps = 2/330 (0%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N + N  T   ++  +C A ++++   +  EM  + V P+VVT NV++D   + G  + A
Sbjct: 90  NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L+D M+  G++P   TYN++L G C +G  + A E+F  M+  G    V S++ILI G
Sbjct: 150 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 209

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH-QVERAFKLFDEMQRNGVAA 307
           +C+  EIE AL +Y EM  +GIKPD+V  + L +GLF    +++ A     EM+  G+  
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL-IGLFARRGKMDHAMAYLREMRCFGLVP 268

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D   Y   I G C+ G + +A+ +   +    C  D+  YN+L++GLCK  RL  A  L 
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +    + P++ T++ +I G C +G++DKA  LF  M    + P+++T++ LI G  R 
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +  K  +L   M    + P+    SI++D
Sbjct: 389 GDLDKANDLWDDMHSREIFPNHVTYSILID 418



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 162/330 (49%)

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           +E++  +   +  P    +  +IR +  ++   EA   F  ++D  V       N ++  
Sbjct: 10  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 69

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L + G    A+    L+       + +T N ++  +C     +    +   ME       
Sbjct: 70  LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 129

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +++++++   +  + E A++L   M+SKG+KP +V +N++  GL      ++A+++F 
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 189

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM   GVA D  ++   I G C+ G I EA++++  +R    + D+ +++ LI    + G
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 249

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           +++ A+   R + C  LVP+ V Y+++IGG C  G M  A  +  +M     +P+V+T++
Sbjct: 250 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYN 309

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            L+ G  +         LL++M+E  V PD
Sbjct: 310 TLLNGLCKERRLLDAEGLLNEMRERGVPPD 339



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 2/303 (0%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           QP V  F++++    ++ K  EA     L++ H V   A   N LL      G  + A +
Sbjct: 24  QPRV--FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 81

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            +  + S   +   ++ +I+++ YCK  E +   ++ SEM  + + PDVV HN +    F
Sbjct: 82  AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 141

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                E A  L D M   G+     TY + + GLC++G   +A E+F  +       D+R
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           ++  LI G C+ G +E AL++++ +    + P++V++S +IG     G+MD A     +M
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
               +VP+ + + M+I GF R    S  + +  +M     +PD    + +++ L K    
Sbjct: 262 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321

Query: 466 LNS 468
           L++
Sbjct: 322 LDA 324


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 230/452 (50%), Gaps = 6/452 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+  LI  LC E ++  A  +   +   G  P+V T   +++ LC+      A ++
Sbjct: 157 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSI 216

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE M +       VC PN VT++++IDGL K G VD A  L  +M D    P  + YTS+
Sbjct: 217 FEGMDDK------VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 270

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           IR F       +  +++ EM+  G  P++   N  MD + K G+ ++   L   +  HG 
Sbjct: 271 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 330

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PDA +Y+ L+ G    G  N   ELF +M+  GC     +Y+ +I+G+CK+ ++  A  
Sbjct: 331 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 390

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM  KG  P VV + ++  GL +I +++ A+ LF+E + NG+  +   Y + IDG  
Sbjct: 391 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 450

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G I EA  +   L       ++  +N L+D L K+  +  AL  F+S+      PN +
Sbjct: 451 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 510

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TYSI+I GLC   + +KA   + +M++  + PN IT+  +I G  +     +   L  + 
Sbjct: 511 TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRF 570

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           K    +PD++  + +++ L+    ++++   F
Sbjct: 571 KANGGIPDSASYNAMIEGLSSANKAMDAYALF 602



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 218/492 (44%), Gaps = 52/492 (10%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG--------- 67
           S F P +     L+       ++ EA  +   +R F   P    YT L+           
Sbjct: 4   SGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPW 63

Query: 68  -LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            LC+ +    A+ LFE++            P    Y T+I G    G  D+A  LL + K
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKV------PCAYAYNTMIMGYGSAGKFDEAYGLLERQK 117

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            K   P+V+ Y  ++      +   EA R+F EM    V PNV T+N+++D LC+ GK++
Sbjct: 118 AKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLN 176

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  + D M + G+ P+  T N ++D  C   ++  A  +F  M+   C     ++S LI
Sbjct: 177 AALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLI 236

Query: 247 NGYCKNKEIEGALSL-----------------------------------YSEMLSKGIK 271
           +G  K   ++ A SL                                   Y EM+  G  
Sbjct: 237 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCS 296

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PD+ + NT    +F+  + E+   LF E+  +G   D  +Y   I GL K G   E  EL
Sbjct: 297 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 356

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F+ ++   C  D  AYN++IDG CKSG++  A +L   +      P VVTY  +I GL  
Sbjct: 357 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 416

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
             ++D+A  LF + + N +  NV+ +  LI GF ++    +   ++ ++ +  + P+   
Sbjct: 417 IDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 476

Query: 452 VSIVVDLLAKNE 463
            + ++D L K E
Sbjct: 477 WNCLLDALVKAE 488



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 176/362 (48%), Gaps = 6/362 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +   ++ +  +PD     + +  +       +  ALF ++   G  PD  +Y
Sbjct: 278 GRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +         LF  M          C  +T  Y  +IDG CK G V+KA +L
Sbjct: 338 SILIHGLVKAGLANETYELFYAMKEQG------CVLDTHAYNAVIDGFCKSGKVNKAYQL 391

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK K   P VVTY SVI G       +EA  LF E    G++ NVV ++ ++D   K
Sbjct: 392 LEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGK 451

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA  +++ ++Q G+ P+ +T+N LLD       +N A   F SM+ + C     +
Sbjct: 452 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQIT 511

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILING C+ ++   A   + EM   G+KP+ + + T+  GL +   +  A  LF   +
Sbjct: 512 YSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFK 571

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   D+ +Y   I+GL      ++A  LF   R+  C    +    L+D L K+  LE
Sbjct: 572 ANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLE 631

Query: 362 IA 363
            A
Sbjct: 632 QA 633



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   ++++  +++   TP+  T+  L+  L     I EA   F  ++   C P+  T
Sbjct: 452 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQIT 511

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+NGLCR      A   ++EM     + G+  +PNT+TYTT+I GL K G + +A  
Sbjct: 512 YSILINGLCRVRKFNKAFVFWQEMQ----KLGL--KPNTITYTTMISGLAKAGNILEASG 565

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + K     P+  +Y ++I G   A    +A  LF E   +G   +  T  V++D L 
Sbjct: 566 LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALH 625

Query: 181 KNGKMDEAS 189
           K   +++A+
Sbjct: 626 KAECLEQAA 634


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 230/452 (50%), Gaps = 6/452 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+  LI  LC E ++  A  +   +   G  P+V T   +++ LC+      A ++
Sbjct: 402 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSI 461

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE M +       VC PN VT++++IDGL K G VD A  L  +M D    P  + YTS+
Sbjct: 462 FEGMDDK------VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 515

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           IR F       +  +++ EM+  G  P++   N  MD + K G+ ++   L   +  HG 
Sbjct: 516 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 575

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PDA +Y+ L+ G    G  N   ELF +M+  GC     +Y+ +I+G+CK+ ++  A  
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 635

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM  KG  P VV + ++  GL +I +++ A+ LF+E + NG+  +   Y + IDG  
Sbjct: 636 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 695

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G I EA  +   L       ++  +N L+D L K+  +  AL  F+S+      PN +
Sbjct: 696 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 755

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TYSI+I GLC   + +KA   + +M++  + PN IT+  +I G  +     +   L  + 
Sbjct: 756 TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRF 815

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           K    +PD++  + +++ L+    ++++   F
Sbjct: 816 KANGGIPDSASYNAMIEGLSSANKAMDAYALF 847



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 226/497 (45%), Gaps = 42/497 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +  +    D V +   I       ++  +   F +++  G  PD  TY
Sbjct: 244 GRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTY 303

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+++  LC+ +    A+ LFE++            P    Y T+I G    G  D+A  L
Sbjct: 304 TSMIGVLCKANRLDEAVELFEQLEQNRKV------PCAYAYNTMIMGYGSAGKFDEAYGL 357

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L + K K   P+V+ Y  ++      +   EA R+F EM    V PNV T+N+++D LC+
Sbjct: 358 LERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCR 416

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK++ A  + D M + G+ P+  T N ++D  C   ++  A  +F  M+   C     +
Sbjct: 417 EGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVT 476

Query: 242 YSILINGYCKNKEIEGALSL-----------------------------------YSEML 266
           +S LI+G  K   ++ A SL                                   Y EM+
Sbjct: 477 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G  PD+ + NT    +F+  + E+   LF E+  +G   D  +Y   I GL K G   
Sbjct: 537 HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLAN 596

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           E  ELF+ ++   C  D  AYN++IDG CKSG++  A +L   +      P VVTY  +I
Sbjct: 597 ETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVI 656

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GL    ++D+A  LF + + N +  NV+ +  LI GF ++    +   ++ ++ +  + 
Sbjct: 657 DGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 716

Query: 447 PDASIVSIVVDLLAKNE 463
           P+    + ++D L K E
Sbjct: 717 PNVYTWNCLLDALVKAE 733



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 176/362 (48%), Gaps = 6/362 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +   ++ +  +PD     + +  +       +  ALF ++   G  PD  +Y
Sbjct: 523 GRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSY 582

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +         LF  M          C  +T  Y  +IDG CK G V+KA +L
Sbjct: 583 SILIHGLVKAGLANETYELFYAMKEQG------CVLDTHAYNAVIDGFCKSGKVNKAYQL 636

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK K   P VVTY SVI G       +EA  LF E    G++ NVV ++ ++D   K
Sbjct: 637 LEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGK 696

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA  +++ ++Q G+ P+ +T+N LLD       +N A   F SM+ + C     +
Sbjct: 697 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQIT 756

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILING C+ ++   A   + EM   G+KP+ + + T+  GL +   +  A  LF   +
Sbjct: 757 YSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFK 816

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   D+ +Y   I+GL      ++A  LF   R+  C    +    L+D L K+  LE
Sbjct: 817 ANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLE 876

Query: 362 IA 363
            A
Sbjct: 877 QA 878



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 224/495 (45%), Gaps = 48/495 (9%)

Query: 8   FVVLGRILK----SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           F  L RIL+    S F P +     L+       ++ EA  +   +R F   P    YT 
Sbjct: 141 FDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTI 200

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+  L         L LF +M     E G   E N   +TT+I    +EG VD A  LL 
Sbjct: 201 LIGALSEVREPDPMLILFHQMQ----ELGY--EVNVHLFTTLIRVFAREGRVDAALSLLD 254

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +MK  ++  ++V Y   I  F  A   + + + F EM   G+ P+ VT+  ++  LCK  
Sbjct: 255 EMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKAN 314

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++DEA  L + + Q+   P A+ YNT++ G+   G+ + A  L    ++ G   +V +Y+
Sbjct: 315 RLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYN 374

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            ++    K + +E AL ++ EM    + P+V  +N L   L    ++  A ++ D+M+R 
Sbjct: 375 CILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERA 433

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  +  T    ID LCK   + EA  +F  +    C  +   ++SLIDGL K GR++ A
Sbjct: 434 GLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDA 493

Query: 364 LELF-RSLPCGVLVPNVVTYSIMI---------------------GGLCND--------- 392
             L+ + L CG  VP  + Y+ +I                      G   D         
Sbjct: 494 YSLYEKMLDCG-HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMD 552

Query: 393 -----GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
                G+ +K R LF ++  +  +P+  ++ +LI G ++    ++  EL + MKE   + 
Sbjct: 553 CVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVL 612

Query: 448 DASIVSIVVDLLAKN 462
           D    + V+D   K+
Sbjct: 613 DTHAYNAVIDGFCKS 627



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 165/361 (45%), Gaps = 1/361 (0%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            Y +++  + +    D  + +L +M      P+      ++     ++   EA  +   M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
                +P    + +++  L +  + D    L   M + G   +   + TL+  F   GRV
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A  L   M+S      +  Y++ I+ + K  +++ +   + EM S G+ PD V + ++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L + ++++ A +LF+++++N      + Y T I G    G   EA  L    +    
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
              + AYN ++  L K  R+E AL +F  +     VPNV TY+I+I  LC +G+++ A +
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALE 425

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           +  DME   + PNV+T +++I    +  +  +   +   M +    P+A   S ++D L 
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 461 K 461
           K
Sbjct: 486 K 486



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   ++++  +++   TP+  T+  L+  L     I EA   F  ++   C P+  T
Sbjct: 697 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQIT 756

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+NGLCR      A   ++EM     + G+  +PNT+TYTT+I GL K G + +A  
Sbjct: 757 YSILINGLCRVRKFNKAFVFWQEMQ----KLGL--KPNTITYTTMISGLAKAGNILEASG 810

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + K     P+  +Y ++I G   A    +A  LF E   +G   +  T  V++D L 
Sbjct: 811 LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALH 870

Query: 181 KNGKMDEAS 189
           K   +++A+
Sbjct: 871 KAECLEQAA 879



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/205 (20%), Positives = 90/205 (43%)

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L + +    + +   ++ +EM  +G    +      +    K+  + EA ++  T+R
Sbjct: 128 YNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMR 187

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             K      AY  LI  L +    +  L LF  +       NV  ++ +I     +G++D
Sbjct: 188 KFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVD 247

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L  +M+ N++  +++ +++ I  F +  +     +  H+MK   +MPD    + ++
Sbjct: 248 AALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMI 307

Query: 457 DLLAKNEISLNSLPSFTVHEQQEEV 481
            +L K      ++  F   EQ  +V
Sbjct: 308 GVLCKANRLDEAVELFEQLEQNRKV 332


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 234/463 (50%), Gaps = 41/463 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  +TF ++I G C + R++   +L   +  F C PDV T+  L+N  C    T VA++ 
Sbjct: 245 PSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDW 304

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M       GV  EP+  T+TTI+  LC+EG V +A++L   ++D  I PN   Y ++
Sbjct: 305 LHLMVRS----GV--EPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTL 358

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G+  A++  +A  L+ EM   GV P+ VTFN+++    K G+++++ RLL  +I  G+
Sbjct: 359 MDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGL 418

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY----------- 249
             D+  Y+ ++   C  GR++ A +L   +   G   +V +++ LI  Y           
Sbjct: 419 FLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFE 478

Query: 250 ------------------------CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
                                   C+   ++ A  L   ML KG   + V +  L  G F
Sbjct: 479 AYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYF 538

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +++ +E A  L+ EM+  G+  D   +   IDGL K G + EA E+F  +  +    +  
Sbjct: 539 KMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNF 598

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           AYNSLI GLC  GR+  AL+L + +    L+ +  T++I+I G C  GQM  A + FLDM
Sbjct: 599 AYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDM 658

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +   ++P++ TF++LI G+ +  +     E+++KM    + PD
Sbjct: 659 QRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPD 701



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 232/481 (48%), Gaps = 41/481 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV  G  +L  + K   +PD VTF  LI   C   R   A      +   G EP V T+T
Sbjct: 262 RVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFT 321

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+++ LCR  + + A  LF+    G  + G+   PN   Y T++DG  K   V +A  L 
Sbjct: 322 TILHALCREGNVVEARKLFD----GIQDMGIA--PNAAIYNTLMDGYFKAREVAQASLLY 375

Query: 123 LQMKDKNIKPNVVTYTSVIRG-----------------------------------FCYA 147
            +M+   + P+ VT+  ++ G                                    C+A
Sbjct: 376 EEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWA 435

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
              +EA +L  E++++G+  +VV FN ++    + G  D+A     +M++ G  P + T 
Sbjct: 436 GRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTC 495

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N+LL G C  G +  A+ L   M   G      +Y++L++GY K   +EGA  L+ EM  
Sbjct: 496 NSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKE 555

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +GI PD V    L  GL +   VE A+++F EM   G   + + Y + I GLC  G + E
Sbjct: 556 RGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTE 615

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A++L   +R      D   +N +IDG C+ G+++ A+E F  +    L+P++ T++I+IG
Sbjct: 616 ALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIG 675

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           G C    M  A ++   M    + P++ T++  + G+ R+ + ++ + +L ++    ++P
Sbjct: 676 GYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVP 735

Query: 448 D 448
           D
Sbjct: 736 D 736



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 233/513 (45%), Gaps = 77/513 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR       L  +++S   P   TFT+++  LC E  ++EA  LF  ++  G  P+   Y
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G  +      A  L+EEM       GV   P+ VT+  ++ G  K G ++ +  L
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTT----GV--SPDCVTFNILVWGHYKYGRIEDSDRL 409

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  +    +  +   Y  ++   C+A   +EA +L  E++++G+  +VV FN ++    +
Sbjct: 410 LKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSR 469

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G  D+A     +M++ G  P + T N+LL G C  G +  A+ L   M   G      +
Sbjct: 470 AGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVA 529

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI------------------------- 276
           Y++L++GY K   +EGA  L+ EM  +GI PD V                          
Sbjct: 530 YTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMS 589

Query: 277 ----------HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
                     +N+L  GL +  +V  A KL  EM++ G+ +DT+T+   IDG C+ G + 
Sbjct: 590 AIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMK 649

Query: 327 EAVELF------------HTLRILKCEF-----------------------DIRAYNSLI 351
            A+E F             T  IL   +                       DI  YN+ +
Sbjct: 650 FAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYM 709

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            G C+  ++  A+ +   L    +VP+ VTY+ M+ G+C+D  +D+A  L   + +   +
Sbjct: 710 HGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMILTAKLLKMGFI 768

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           PNVIT +ML+  F +   P K +    K++EI+
Sbjct: 769 PNVITTNMLLSHFCKQGMPEKALIWGQKLREIS 801



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 218/446 (48%), Gaps = 40/446 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF---GCEPDV 58
           GR+     +L  +L+   T   V F SLI    A SR       F   R+    G  P  
Sbjct: 436 GRLDEAMKLLQELLEKGLTLSVVAFNSLIG---AYSRAGLEDKAFEAYRIMVRCGFTPSS 492

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            T  +L+ GLCR      A  L   M      F +    N V YT ++DG  K   ++ A
Sbjct: 493 STCNSLLMGLCRKGWLQEARILLYRMLEKG--FPI----NKVAYTVLLDGYFKMNNLEGA 546

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           + L  +MK++ I P+ V +T++I G   A +  EA  +F+EM   G  PN   +N ++  
Sbjct: 547 QFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRG 606

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LC  G++ EA +L   M Q G+  D FT+N ++DGFC  G++  A E F+ M+ +G    
Sbjct: 607 LCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPD 666

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           +F+++ILI GYCK  ++ GA  + ++M S G+ PD+  +NT   G   + ++ +A  + D
Sbjct: 667 IFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILD 726

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCK 356
           ++   G+  DT TY T + G+C +  I++   +  T ++LK  F  ++   N L+   CK
Sbjct: 727 QLISAGIVPDTVTYNTMLSGICSD--ILDRAMIL-TAKLLKMGFIPNVITTNMLLSHFCK 783

Query: 357 SGRLEIAL---ELFRSLPCGVLVPNVVTYSIMIGGLC---NDGQMDKA---RDLFLDMEE 407
            G  E AL   +  R +  G    + ++Y I+    C   +D ++ +    + LF+D   
Sbjct: 784 QGMPEKALIWGQKLREISFGF---DEISYRILDQAYCLMQDDVELVRGTYEKHLFMDFLM 840

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKV 433
                  ITFD   R     N+P K+
Sbjct: 841 ------YITFDYFSR-----NKPQKI 855



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 193/408 (47%), Gaps = 8/408 (1%)

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           E D     TL+ G         AL +   M       GV   P   + T ++  L + G 
Sbjct: 174 ESDFSVLNTLLRGFLNVGMGFEALEVLRMMR------GVGVRPGLSSITILLRLLLRIGD 227

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
                +L   M  K  +P+ +T+ ++I GFC        + L   M      P+VVTFN+
Sbjct: 228 YGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNI 287

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++  C  G+   A   L LM++ GV P   T+ T+L   C  G V  A++LF  ++ MG
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                  Y+ L++GY K +E+  A  LY EM + G+ PD V  N L  G ++  ++E + 
Sbjct: 348 IAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSD 407

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +L  ++  +G+  D+  Y   +  LC  G + EA++L   L        + A+NSLI   
Sbjct: 408 RLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAY 467

Query: 355 CKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            ++G  + A E +R +  CG   P+  T + ++ GLC  G + +AR L   M E     N
Sbjct: 468 SRAGLEDKAFEAYRIMVRCG-FTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPIN 526

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            + + +L+ G+ ++N       L  +MKE  + PDA   + ++D L+K
Sbjct: 527 KVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSK 574



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 42/71 (59%), Gaps = 3/71 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFT-KLRVFGCEPDVF 59
           M +++   ++L +++ +   PD VT+ +++ G+C++  I++ A + T KL   G  P+V 
Sbjct: 715 MRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD--ILDRAMILTAKLLKMGFIPNVI 772

Query: 60  TYTTLVNGLCR 70
           T   L++  C+
Sbjct: 773 TTNMLLSHFCK 783


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 220/406 (54%), Gaps = 8/406 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V ++  ++  +C+      A+ +F EMA         CEP+  TY T++DGLCKE  +
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQK------CEPDVFTYCTLMDGLCKEDRI 223

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A  LL +M+ +   P+ VT+  +I G C   D     +L   M  +G  PN VT+N I
Sbjct: 224 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++ LC  GK+D+A  LLD M+     P+  TY TL++G    GR      L  S+E  G 
Sbjct: 284 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 343

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
               ++YS LI+G  K ++ E A+ L+ +M+ KG +P++V+++ L  GL    +++ A +
Sbjct: 344 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 403

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +  EM   G   + +TY + I G  K G   +A+ ++  +    C  +   Y+ LI GLC
Sbjct: 404 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 463

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM--EENAVVPN 413
           + G+L  A+ ++  +    L P+VV YS MI GLCN G ++    LF +M  +E+   P+
Sbjct: 464 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPD 523

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           V+T+++L+R   + N  S  I+LL+ M +    PD    +I ++ L
Sbjct: 524 VVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 191/371 (51%), Gaps = 43/371 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+ +L+ GLC E RI EA  L  ++++ GC P   T+  L+NGLC+    +    L
Sbjct: 205 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKL 264

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M      F   C PN VTY TII+GLC +G +DKA  LL +M      PN VTY ++
Sbjct: 265 VDNM------FLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTL 318

Query: 141 IRGFC--------------------YAKDW---------------NEAKRLFIEMMDQGV 165
           I G                      +A ++                EA  L+ +M+++G 
Sbjct: 319 INGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGC 378

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           QPN+V ++ ++D LC+ GK+DEA  +L  M+  G  P+AFTY++L+ GF  TG    A  
Sbjct: 379 QPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 438

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           ++  M    C      YS+LI+G C++ ++  A+ +++ ML +G++PDVV ++++  GL 
Sbjct: 439 VWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLC 498

Query: 286 EIHQVERAFKLFDEM--QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
               VE   KLF+EM  Q +    D  TY   +  LCK   I  A++L +++    C  D
Sbjct: 499 NAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPD 558

Query: 344 IRAYNSLIDGL 354
           +   N  ++ L
Sbjct: 559 LITCNIFLNAL 569



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 115/201 (57%), Gaps = 9/201 (4%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C  P+ V +++LI GLC E ++ EA  +  ++   GC P+ FTY++L+ G  +T ++ 
Sbjct: 376 KGC-QPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A+ +++EMA  N      C PN + Y+ +I GLC++G + +A  +   M  + ++P+VV
Sbjct: 435 KAIRVWKEMAKNN------CVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVV 488

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQ--GVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            Y+S+I G C A       +LF EM+ Q    QP+VVT+N+++  LCK   +  A  LL+
Sbjct: 489 AYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLN 548

Query: 194 LMIQHGVRPDAFTYNTLLDGF 214
            M+  G  PD  T N  L+  
Sbjct: 549 SMLDRGCNPDLITCNIFLNAL 569



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 133/279 (47%), Gaps = 9/279 (3%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF---SYSILINGYCKNKEIEGALSLY 262
           T+ +L++ +  +G       LF   + M  +  VF   ++ ++   Y K    E A+ L+
Sbjct: 66  TFYSLIENYANSGDFG---TLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELF 122

Query: 263 SEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFD--EMQRNGVAADTWTYRTFIDGL 319
             M+ +   +  V   N++   + +     RA + ++     +  ++ +  ++   I  +
Sbjct: 123 GRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAM 182

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G +  A+E+F  + I KCE D+  Y +L+DGLCK  R++ A+ L   +      P+ 
Sbjct: 183 CKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSS 242

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++++I GLC  G M +   L  +M     VPN +T++ +I G     +  K + LL +
Sbjct: 243 VTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 302

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           M     +P+      +++ L K   S++ +   +  E++
Sbjct: 303 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 341


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 216/423 (51%), Gaps = 6/423 (1%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G +  G ++LG +    F P  VT+ SLI  L  +  + +  +LF ++R  G  P+V  Y
Sbjct: 1196 GDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIY 1255

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++++ LC+      A+ + ++M      F   C+P+ +T+ T+I GLC EG V KA+  
Sbjct: 1256 NSVIDALCKCRSATQAMVILKQM------FASGCDPDIITFNTLITGLCHEGHVRKAEHF 1309

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L +   + + PN ++YT +I GFC   +   A  L +EMM +G  P+VVTF  ++  L  
Sbjct: 1310 LREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVV 1369

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             GK+ EA  + + M +  V PD   YN L+ G C    +  AK +   M     +   F 
Sbjct: 1370 AGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFV 1429

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            Y+ LI+G+ +++ +  A  ++  M  KGI PD+V  N +  G  +   +  A      M+
Sbjct: 1430 YATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 1489

Query: 302  RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            + G   D +TY T I G  K G +  A+     +   KC+ ++  Y+SLI+G CK+G  +
Sbjct: 1490 KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTD 1549

Query: 362  IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             A  LF ++    L PNVVTY+I+IG L    ++ +A   F  M  N   PN +T   L+
Sbjct: 1550 FAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLV 1609

Query: 422  RGF 424
             G 
Sbjct: 1610 NGL 1612



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 209/440 (47%), Gaps = 6/440 (1%)

Query: 29   LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
            L++GLC E R+ E   L       GC P V  Y  L++G CR       L L  EM    
Sbjct: 1153 LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETK- 1211

Query: 89   GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
               G +  P  VTY ++I+ L K+G ++K   L L+M+ +   PNV  Y SVI   C  +
Sbjct: 1212 ---GFL--PTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCR 1266

Query: 149  DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
               +A  +  +M   G  P+++TFN ++  LC  G + +A   L   I+  + P+  +Y 
Sbjct: 1267 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 1326

Query: 209  TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
             L+ GFC+ G +  A +L V M   G    V ++  LI+G     ++  AL +  +M  +
Sbjct: 1327 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 1386

Query: 269  GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
             + PDV I+N L  GL +   +  A  + +EM    V  D + Y T IDG  ++  + +A
Sbjct: 1387 QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 1446

Query: 329  VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
             ++F  +       DI + N++I G C+ G +  A+    ++     +P+  TY+ +I G
Sbjct: 1447 RKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1506

Query: 389  LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
                G ++ A     DM +    PNV+T+  LI G+ +  +      L   M+   + P+
Sbjct: 1507 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPN 1566

Query: 449  ASIVSIVVDLLAKNEISLNS 468
                +I++  L K +  L +
Sbjct: 1567 VVTYTILIGSLFKKDKVLRA 1586



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 204/436 (46%), Gaps = 46/436 (10%)

Query: 4    VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
             +   V+L ++  S   PD +TF +LI GLC E  + +A     +       P+  +YT 
Sbjct: 1268 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 1327

Query: 64   LVNGLCRTSHTIVALNLFEEMANGNGE------FGVVCE--------------------- 96
            L++G C     +VA +L  EM  G G       FG +                       
Sbjct: 1328 LIHGFCMRGELMVASDLLVEMM-GRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 1386

Query: 97   ---PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
               P+   Y  +I GLCK+  +  AK +L +M +KN++P+   Y ++I GF  +++  +A
Sbjct: 1387 QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 1446

Query: 154  KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            +++F  M  +G+ P++V+ N ++   C+ G M EA   +  M + G  PD FTY T++ G
Sbjct: 1447 RKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1506

Query: 214  FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            +   G +N A      M    CK  V +YS LINGYCK  + + A  L++ M ++ + P+
Sbjct: 1507 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPN 1566

Query: 274  VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK------NGYIVE 327
            VV +  L   LF+  +V RA   F+ M  N  + +  T    ++GL        N     
Sbjct: 1567 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCN 1626

Query: 328  AVELFHTLRIL----KCEFDI-----RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
              E+     +L    K  FDI      AYN++I  LC+   L  AL+    +     VPN
Sbjct: 1627 TSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN 1686

Query: 379  VVTYSIMIGGLCNDGQ 394
             +T+  ++ G C+ G+
Sbjct: 1687 PITFLSLLYGFCSVGK 1702



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 194/437 (44%), Gaps = 6/437 (1%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            P+      L+K L  + R  +A  L+ ++       D ++   LV GLC        L L
Sbjct: 1110 PEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKL 1169

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             E        +G  C P+ V Y  +IDG C+ G + +   LL +M+ K   P +VTY S+
Sbjct: 1170 IE------ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSL 1223

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
            I       D  +   LF+EM  +G  PNV  +N ++D LCK     +A  +L  M   G 
Sbjct: 1224 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGC 1283

Query: 201  RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             PD  T+NTL+ G C  G V  A+                SY+ LI+G+C   E+  A  
Sbjct: 1284 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASD 1343

Query: 261  LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            L  EM+ +G  PDVV    L  GL    +V  A  + ++M    V  D   Y   I GLC
Sbjct: 1344 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 1403

Query: 321  KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            K   +  A  +   +     + D   Y +LIDG  +S  L  A ++F  +    + P++V
Sbjct: 1404 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIV 1463

Query: 381  TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            + + MI G C  G M +A     +M +   +P+  T+  +I G+ +    +  +  L  M
Sbjct: 1464 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 1523

Query: 441  KEINVMPDASIVSIVVD 457
             +    P+    S +++
Sbjct: 1524 IKRKCKPNVVTYSSLIN 1540



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 179/374 (47%), Gaps = 9/374 (2%)

Query: 116  DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNV 174
            D   + L  M      P      +++  +  A    +A ++   + +Q G  P V   N 
Sbjct: 1058 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNR 1117

Query: 175  IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
            ++  L +  + D+A +L D M+      D ++   L+ G CL  RV    +L  +    G
Sbjct: 1118 LLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAG 1177

Query: 235  C-KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
            C  H VF Y++LI+GYC+  ++   L L  EM +KG  P +V + +L   L +   +E+ 
Sbjct: 1178 CIPHVVF-YNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKI 1236

Query: 294  FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
              LF EM++ G + +   Y + ID LCK     +A+ +   +    C+ DI  +N+LI G
Sbjct: 1237 GSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITG 1296

Query: 354  LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            LC  G +  A    R      L PN ++Y+ +I G C  G++  A DL ++M      P+
Sbjct: 1297 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1356

Query: 414  VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
            V+TF  LI G +   + S+ + +  KM E  V PD +I ++++  L K  +    LP+  
Sbjct: 1357 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM----LPA-- 1410

Query: 474  VHEQQEEVDESNVK 487
                 EE+ E NV+
Sbjct: 1411 AKNILEEMLEKNVQ 1424



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 173/368 (47%), Gaps = 1/368 (0%)

Query: 97   PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKR 155
            P       ++      G + KA ++  +++++    P V     +++     + W++A++
Sbjct: 1074 PTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 1133

Query: 156  LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
            L+ EM+ +    +  +  V++  LC   +++E  +L++     G  P    YN L+DG+C
Sbjct: 1134 LYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 1193

Query: 216  LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
              G +     L   ME+ G   T+ +Y  LIN   K  ++E   SL+ EM  +G  P+V 
Sbjct: 1194 RRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1253

Query: 276  IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            I+N++   L +     +A  +  +M  +G   D  T+ T I GLC  G++ +A       
Sbjct: 1254 IYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1313

Query: 336  RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               +   +  +Y  LI G C  G L +A +L   +      P+VVT+  +I GL   G++
Sbjct: 1314 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1373

Query: 396  DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
             +A  +   M E  V P+V  +++LI G  +         +L +M E NV PD  + + +
Sbjct: 1374 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1433

Query: 456  VDLLAKNE 463
            +D   ++E
Sbjct: 1434 IDGFIRSE 1441


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 231/460 (50%), Gaps = 5/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   F +L  + +     D +  ++LI+GLC + RI EA   F  +    C P+V TY
Sbjct: 125 GQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITY 183

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+VNGLC+ +    AL LF++M     E    CEP+ ++Y+T+ID LCK   VDKA E 
Sbjct: 184 NTVVNGLCKANRIDEALELFDDMEK-RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEY 242

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+     PNVVTY+S+I G C     +E   L + M ++G   N++ FN ++  L K
Sbjct: 243 FKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWK 302

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N + ++A +  + +++ G +P+  TYN  + G C  GRV+ A  + + M        V +
Sbjct: 303 NDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVIT 362

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +I+G+CK   ++ A  +++ M+     P  V   TL  G  E  +   AF++ ++M 
Sbjct: 363 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 422

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G      TY   +D +C    +  A+E++H ++  K + D   Y  LI  LC++ R++
Sbjct: 423 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVD 482

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A E    +    +VPN      ++  LC  G++D+A  +  ++ E    P   TF +L+
Sbjct: 483 EAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILV 542

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                  +     +LL   +    + DA+  S+ V  + K
Sbjct: 543 EELYLRKKWEAASKLL---RSPGFVADAATYSLCVAEICK 579



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 219/450 (48%), Gaps = 47/450 (10%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G + + +T   L+N   +      A  L +E      E   +C PN + YTT+I+G CK 
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKE------ELEPLCFPNEIMYTTVINGFCKA 124

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G VD+A ELL +MK++ +K +V+ ++++I+G C     +EA   F  M ++   PNV+T+
Sbjct: 125 GQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITY 183

Query: 173 NVIMDELCKNGKMDEASRLLDLM-----IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N +++ LCK  ++DEA  L D M       HG  PD  +Y+T++D  C   RV+ A E F
Sbjct: 184 NTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYF 243

Query: 228 VSMESMGCKHTVFSYSILINGYCK-----------------------------------N 252
             M ++GC   V +YS LI+G CK                                   N
Sbjct: 244 KRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKN 303

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            E E A   +  +L  G KP+VV +N    GL +  +V+ A+++  EM  + V  D  TY
Sbjct: 304 DEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITY 363

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            + IDG CK G + +A ++F  + + +C      + +L+ G  +  +   A  +   +  
Sbjct: 364 SSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN 423

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
              +P + TY++++  +C    ++ A +++  M+     P+  T+  LI+   R     +
Sbjct: 424 AGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDE 483

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             E L  M+  NV+P+ +I   +V++L K 
Sbjct: 484 AKEFLDVMEADNVVPNGAICHALVEVLCKQ 513



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 221/486 (45%), Gaps = 50/486 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-----VFGCEP 56
           GR+         + + C +P+ +T+ +++ GLC  +RI EA  LF  +        GCEP
Sbjct: 160 GRIDEALEQFKSMGEEC-SPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEP 218

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           DV +Y+T+++ LC+      A   F+ M        V C PN VTY+++IDGLCK     
Sbjct: 219 DVISYSTVIDALCKAQRVDKAYEYFKRMR------AVGCAPNVVTYSSLIDGLCKVDRPS 272

Query: 117 KAKELLLQMKDKNI-----------------------------------KPNVVTYTSVI 141
           +  ELLL MK+K                                     KPNVVTY   +
Sbjct: 273 ECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAV 332

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C A   +EA R+ +EM++  V P+V+T++ I+D  CK G+MD+A  +   M+ H   
Sbjct: 333 HGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 392

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P   T+ TLL GF    +   A  +   M + G    + +Y++L++  C    +E AL +
Sbjct: 393 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEI 452

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           Y +M  K  +PD   +  L   L    +V+ A +  D M+ + V  +       ++ LCK
Sbjct: 453 YHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 512

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA  +   +  + C+     +  L++ L    + E A +L RS      V +  T
Sbjct: 513 QGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRS---PGFVADAAT 569

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           YS+ +  +C  G+ D+A ++   M    V P+  T+  ++R    ++     I    KM 
Sbjct: 570 YSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMA 629

Query: 442 EINVMP 447
                P
Sbjct: 630 SRGCAP 635



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 200/461 (43%), Gaps = 61/461 (13%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD ++++++I  LC   R+ +A   F ++R  GC P+V TY++L++GLC+       L L
Sbjct: 218 PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLEL 277

Query: 81  FEEMANG------------------NGEFGVVCE-----------PNTVTYTTIIDGLCK 111
              M                     N E    C+           PN VTY   + GLCK
Sbjct: 278 LLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCK 337

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G VD+A  +LL+M +  + P+V+TY+S+I GFC A   ++A  +F  MM     P+ VT
Sbjct: 338 AGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVT 397

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           F  ++    ++ K  EA R+ + M+  G  P   TYN L+D  C    V  A E++  M+
Sbjct: 398 FMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMK 457

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
               +    +Y+ LI   C+ + ++ A      M +  + P+  I + L   L +  +V+
Sbjct: 458 RKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVD 517

Query: 292 RAFKLFDE--------------------------------MQRNGVAADTWTYRTFIDGL 319
            A  + D                                 ++  G  AD  TY   +  +
Sbjct: 518 EACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEI 577

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G   EAVE+   + +     D   Y +++  LC   R+E A+  F  +      P +
Sbjct: 578 CKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGL 637

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           VTY+++IG  C+    D+A  +F  M      P   T   L
Sbjct: 638 VTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 160/355 (45%), Gaps = 38/355 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   + +L  +++S  TPD +T++S+I G C   R+ +A  +FT++ V  C P   T+
Sbjct: 339 GRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 398

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G      +  A  + E+M N     G +  P   TY  ++D +C    V+ A E+
Sbjct: 399 MTLLHGFSEHKKSREAFRVHEDMVNA----GFI--PGLQTYNVLMDCVCGADSVESALEI 452

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK K  +P+  TY  +I+  C A+  +EAK     M    V PN    + +++ LCK
Sbjct: 453 YHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 512

Query: 182 NGKMDEASRLLDLMIQHGVRP--------------------------------DAFTYNT 209
            G++DEA  +LD +++ G +P                                DA TY+ 
Sbjct: 513 QGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSL 572

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
            +   C  G+ + A E+   M   G +    +Y  ++   C    +E A++ + +M S+G
Sbjct: 573 CVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRG 632

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
             P +V +  L          + AF++F+ M   G      T RT    L   GY
Sbjct: 633 CAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGY 687



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 9/185 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     VL  +++    P   TF  L++ L    +   A+ L   LR  G   D  TY
Sbjct: 514 GEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAATY 570

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +  V  +C+      A+ + E+M       GV   P+  TY  ++  LC    V+ A   
Sbjct: 571 SLCVAEICKAGKPDEAVEVIEQMVLK----GV--RPDEGTYVAVLRSLCGLDRVESAIAE 624

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  +   P +VTYT +I   C A   +EA R+F  M+  G  P   T   +   L  
Sbjct: 625 FEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRD 684

Query: 182 NGKMD 186
            G  D
Sbjct: 685 AGYQD 689


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 235/452 (51%), Gaps = 15/452 (3%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCE---PDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           LI GLC +SR+ +A    T LR  G E   P V ++  L++G C+     VA + F  M 
Sbjct: 241 LIDGLCRQSRLQDAV---TFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMI 297

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
               ++G++  P+  +Y  ++ GLC  G +++A E    M++  ++P++VTY  +  GF 
Sbjct: 298 ----KYGLL--PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFR 351

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                + A ++   M+  G+ P++VT+ +++   C+ G ++E+ +L + M+  G++    
Sbjct: 352 ILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TY  LL   C +GR++ A  L   ME +G K  + +YS+LI+G CK   +E A+ LY EM
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEM 471

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            SK I P+  + + +  GLFE   +  A   FD + ++ VA +   Y   IDG  K G I
Sbjct: 472 CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNI 531

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EAV  +  +        I  +NSLI G CK G+L  A++L  ++    LVP  VTY+ +
Sbjct: 532 GEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTL 591

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + G C +G M    D+  +ME  A+ P  IT+ ++++G  +     + ++LL  M    +
Sbjct: 592 MNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL 651

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
            PD    + V+    K     +   +F +H Q
Sbjct: 652 FPDQITYNTVIQSFCKAH---DLQKAFQLHNQ 680



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 229/447 (51%), Gaps = 6/447 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +   F +  ++L        VT+T L+  LC   RI EA  L  ++ V G +PD+ T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L++GLC+      A+ L+EEM +          PN+   + II GL ++G + +A+ 
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKR------IYPNSFVCSAIISGLFEKGAISEAQM 501

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               +   ++   ++ Y  +I G+    +  EA R + +++++G+ P +VTFN ++   C
Sbjct: 502 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 561

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA +LLD +  HG+ P + TY TL++G+C  G ++   ++   ME+   K T  
Sbjct: 562 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++++ G CK   +  ++ L   M ++G+ PD + +NT+     + H +++AF+L ++M
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            ++ +     TY   I+GLC  G + +A  L  TL+         AY ++I   C  G +
Sbjct: 682 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 741

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + AL  F  +       ++  YS +I  LC    +  A+  F  M  + + P+     ++
Sbjct: 742 QNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVM 801

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMP 447
           +  F R  +P+ V E+   M +  ++P
Sbjct: 802 LNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 215/425 (50%), Gaps = 8/425 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG V         ++K    PD  ++  L+ GLC    + EA      +   G EPD+ T
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVT 342

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y  L NG         A  + + M  NG         P+ VTYT +I G C+ G ++++ 
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNG-------LNPDLVTYTILICGHCQMGNIEESF 395

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L  +M  + +K ++VTYT ++   C +   +EA  L  EM   G++P+++T++V++  L
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGL 455

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G ++EA  L + M    + P++F  + ++ G    G ++ A+  F S+        +
Sbjct: 456 CKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 515

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+I+I+GY K   I  A+  Y +++ KGI P +V  N+L  G  +  ++  A KL D 
Sbjct: 516 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 575

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           ++ +G+   + TY T ++G C+ G +    ++ H +     +     Y  ++ GLCK GR
Sbjct: 576 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGR 635

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  +++L + +    L P+ +TY+ +I   C    + KA  L   M ++++ P+ +T+++
Sbjct: 636 LHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNV 695

Query: 420 LIRGF 424
           LI G 
Sbjct: 696 LINGL 700



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 232/516 (44%), Gaps = 76/516 (14%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P  V+F +L+ G C    +  A + F  +  +G  PDV++Y  L++GLC       AL
Sbjct: 266 FGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEAL 325

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
               +M N     GV  EP+ VTY  + +G    G +  A +++ +M    + P++VTYT
Sbjct: 326 EFTNDMEN----HGV--EPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYT 379

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G C   +  E+ +L  +M+ QG++ ++VT+ V++  LCK+G++DEA  LL  M   
Sbjct: 380 ILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVI 439

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-------ESMGCK--------------- 236
           G++PD  TY+ L+ G C  G V  A EL+  M        S  C                
Sbjct: 440 GLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA 499

Query: 237 -------------HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
                          +  Y+I+I+GY K   I  A+  Y +++ KGI P +V  N+L  G
Sbjct: 500 QMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYG 559

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG------------------------- 318
             +  ++  A KL D ++ +G+   + TY T ++G                         
Sbjct: 560 FCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPT 619

Query: 319 ----------LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
                     LCK G + E+V+L   +       D   YN++I   CK+  L+ A +L  
Sbjct: 620 QITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHN 679

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L P+ VTY+++I GLC  G +  A  L + +++ ++    + +  +I+      
Sbjct: 680 QMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKG 739

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           +    +   H+M E          S V++ L K  +
Sbjct: 740 DVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNL 775



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 180/382 (47%), Gaps = 32/382 (8%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS------------------ 139
           N V +  +     +   V  A  +L +MK  N++ ++ TY S                  
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEI 226

Query: 140 --------------VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
                         +I G C      +A     E   +   P+VV+FN +M   CK G +
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           D A     +MI++G+ PD ++YN LL G C+ G +  A E    ME+ G +  + +Y+IL
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
            NG+     I GA  +   ML  G+ PD+V +  L  G  ++  +E +FKL ++M   G+
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
                TY   +  LCK+G I EAV L H + ++  + D+  Y+ LI GLCK G +E A+E
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIE 466

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           L+  +    + PN    S +I GL   G + +A+  F  + ++ V   +I ++++I G+ 
Sbjct: 467 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 526

Query: 426 RINEPSKVIELLHKMKEINVMP 447
           ++    + +    ++ E  + P
Sbjct: 527 KLGNIGEAVRSYKQIIEKGISP 548



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 126/256 (49%), Gaps = 3/256 (1%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN+LL     T   +   +++  +++ G     ++  ILI+G C+   ++ A++   E 
Sbjct: 205 TYNSLLYNLRHT---DIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRET 261

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             +   P VV  N L  G  ++  V+ A   F  M + G+  D ++Y   + GLC  G +
Sbjct: 262 GGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSM 321

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA+E  + +     E DI  YN L +G    G +  A ++ + +    L P++VTY+I+
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G C  G ++++  L   M    +  +++T+ +L+    +     + + LLH+M+ I +
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 446 MPDASIVSIVVDLLAK 461
            PD    S+++  L K
Sbjct: 442 KPDLLTYSVLIHGLCK 457


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 241/495 (48%), Gaps = 43/495 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSL------------------------------- 29
           +G V      + +I+++   PD  T+TSL                               
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290

Query: 30  ----IKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
               I GLC   RI EA  LF K++   C P V TYT L+  LC +     ALNL +EM 
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
               E G+  +PN  TYT +ID LC +   +KA+ELL QM +K + PNV+TY ++I G+C
Sbjct: 351 ----ETGI--KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                 +A  +   M  + + PN  T+N ++   CK+  + +A  +L+ M++  V PD  
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVV 463

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN+L+DG C +G  + A  L   M   G     ++Y+ +I+  CK+K +E A  L+  +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             KG+ P+VV++  L  G  +  +V+ A  + ++M       ++ T+   I GLC +G +
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA  L   +  +  +  +     LI  L K G  + A   F+ +      P+  TY+  
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I   C +G++  A D+   M EN V P++ T+  LI+G+  + + +   ++L +M++   
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703

Query: 446 MPDA-SIVSIVVDLL 459
            P   + +S++  LL
Sbjct: 704 EPSQHTFLSLIKHLL 718



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/407 (32%), Positives = 208/407 (51%), Gaps = 7/407 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+++TY  +VNG C+  +   A     ++     E G+  +P+  TYT++I G C+   +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIV----EAGL--DPDFFTYTSLIMGYCQRKDL 269

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D A ++  +M  K  + N V YT +I G C A+  +EA  LF++M D    P V T+ V+
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC + +  EA  L+  M + G++P+  TY  L+D  C   +   A+EL   M   G 
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +Y+ LINGYCK   IE A+ +   M S+ + P+   +N L  G  +   V +A  
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMG 448

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + ++M    V  D  TY + IDG C++G    A  L   +       D   Y S+ID LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS R+E A +LF SL    + PNVV Y+ +I G C  G++D+A  +   M     +PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           TF+ LI G     +  +   L  KM +I + P  S  +I++  L K+
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 217/443 (48%), Gaps = 25/443 (5%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R S    ++  + ++   P+  T+T LI  LC++ +  +A  L  ++   G  P+V TY 
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+NG C+      A+++ E M +          PNT TY  +I G CK   V KA  +L
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRK------LSPNTRTYNELIKGYCKSN-VHKAMGVL 450

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M ++ + P+VVTY S+I G C + +++ A RL   M D+G+ P+  T+  ++D LCK+
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            +++EA  L D + Q GV P+   Y  L+DG+C  G+V+ A  +   M S  C     ++
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+G C + +++ A  L  +M+  G++P V     L   L +    + A+  F +M  
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G   D  TY TFI   C+ G +++A ++   +R      D+  Y+SLI G    G+   
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIG------------------GLCNDGQMDKARDLFLD 404
           A ++ + +      P+  T+  +I                    + N  + D   +L   
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750

Query: 405 MEENAVVPNVITFDMLIRGFIRI 427
           M E++V PN  +++ LI G   +
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEV 773



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 184/356 (51%), Gaps = 1/356 (0%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y T+++ L + G VD+ K++ ++M +  + PN+ TY  ++ G+C   +  EA +   +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           + G+ P+  T+  ++   C+   +D A ++ + M   G R +   Y  L+ G C+  R++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A +LFV M+   C  TV +Y++LI   C ++    AL+L  EM   GIKP++  +  L 
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L    + E+A +L  +M   G+  +  TY   I+G CK G I +AV++   +   K  
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            + R YN LI G CKS  +  A+ +   +    ++P+VVTY+ +I G C  G  D A  L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
              M +  +VP+  T+  +I    +     +  +L   +++  V P+  + + ++D
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 212/475 (44%), Gaps = 62/475 (13%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V     VL ++L+    PD VT+ SLI G C       A  L + +   G  PD +TYT+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           +++ LC++     A +LF+ +     + GV   PN V YT +IDG CK G VD+A  +L 
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLE----QKGV--NPNVVMYTALIDGYCKAGKVDEAHLMLE 556

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M  KN  PN +T+ ++I G C      EA  L  +M+  G+QP V T  +++  L K+G
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
             D A      M+  G +PDA TY T +  +C  GR+  A+++   M   G    +F+YS
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676

Query: 244 ILING----------------------------------------YCKNK---------- 253
            LI G                                        Y K K          
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736

Query: 254 ---EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN-GVAADT 309
              E +  + L  +M+   + P+   +  L +G+ E+  +  A K+FD MQRN G++   
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             +   +   CK     EA ++   +  +     + +   LI GL K G  E    +F++
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856

Query: 370 L-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L  CG    + + + I+I G+   G ++   +LF  ME+N    +  T+ +LI G
Sbjct: 857 LLQCGY-YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 185/371 (49%), Gaps = 25/371 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V    ++L ++L     P+++TF +LI GLCA+ ++ EA  L  K+   G +P V T 
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++ L +      A + F++M +   +      P+  TYTT I   C+EG +  A+++
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTK------PDAHTYTTFIQTYCREGRLLDAEDM 659

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD---- 177
           + +M++  + P++ TY+S+I+G+      N A  +   M D G +P+  TF  ++     
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719

Query: 178 -----------ELCKNGKM---DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
                      ELC    M   D    LL+ M++H V P+A +Y  L+ G C  G +  A
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779

Query: 224 KELFVSME-SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
           +++F  M+ + G   +   ++ L++  CK K+   A  +  +M+  G  P +     L  
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
           GL++  + ER   +F  + + G   D   ++  IDG+ K G +    ELF+ +    C+F
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKF 899

Query: 343 DIRAYNSLIDG 353
             + Y+ LI+G
Sbjct: 900 SSQTYSLLIEG 910


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 220/443 (49%), Gaps = 10/443 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T   ++ GLC   +++ A   F      GC  D+ TYT +V+ L +      A+ L
Sbjct: 128 PSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVAL 187

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            E++ ANG       C P   TY  +++GLCK G +++A +LL ++ D    P+VVTYTS
Sbjct: 188 MEKITANG-------CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 240

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G    K   EA +LF EM  +G+  + V +  ++  L + GK+ +AS +   M   G
Sbjct: 241 LIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 300

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD  T +T++DG C  GR+  A  +F SME+ G       YS LI+G CK ++++ AL
Sbjct: 301 CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 360

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + ++M      PD + +N L  GL +   VE A   FDEM   G   D +TY   + G 
Sbjct: 361 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGF 420

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G    A  +F  +    C  ++  Y +LI GLCK  +L  A   F+ +      P+ 
Sbjct: 421 CKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDS 480

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             YS ++ GLC  G+++    LF +ME + V  N  T   LI    + N   + + L + 
Sbjct: 481 FVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNA 539

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           +++   MP     + ++  L K+
Sbjct: 540 IRK-EGMPHPYAYNSIISTLIKS 561



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/360 (35%), Positives = 197/360 (54%), Gaps = 8/360 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+     +L +I+ +  TPD VT+TSLI GL  E R  EA  LF ++ + G   D   
Sbjct: 213 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVC 272

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ GL +      A ++++ M +        C P+ VT +T+IDGLCK G +  A  
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQG------CVPDVVTLSTMIDGLCKAGRIGAAVR 326

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M+ + + PN V Y+++I G C A+  + A  +  +M      P+ +T+N+++D LC
Sbjct: 327 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 386

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G ++ A    D M++ G +PD +TYN L+ GFC  G  + A  +F  M S  C   V 
Sbjct: 387 KSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVV 446

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI+G CK +++  A   +  M  +G  PD  ++++L  GL +  ++E    LFDEM
Sbjct: 447 TYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 506

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +R+GV A++ T    I  LCK   + EAV LF+ +R         AYNS+I  L KS ++
Sbjct: 507 ERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISTLIKSAKV 564



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 218/451 (48%), Gaps = 7/451 (1%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTYTTLVNGLCRTSH 73
           L + F PD  T+  LI G C      EA A+  ++   +G  P + T+  +++GLC++  
Sbjct: 86  LATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK 145

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
            + A++ FE     NG     C  +  TYT I+D L K   +  A  L+ ++      P 
Sbjct: 146 VLAAMDHFETTTT-NG-----CTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPT 199

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           + TY +++ G C      EA  L  +++D G  P+VVT+  ++D L K  +  EA +L  
Sbjct: 200 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 259

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G+  D   Y  L+ G    G++  A  ++ +M S GC   V + S +I+G CK  
Sbjct: 260 EMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAG 319

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            I  A+ ++  M ++G+ P+ V+++ L  GL +  +++ A ++  +M++     DT TY 
Sbjct: 320 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 379

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             IDGLCK+G +  A   F  +    C+ D+  YN L+ G CK+G  + A  +F  +   
Sbjct: 380 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSS 439

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              PNVVTY  +I GLC   Q+ KA   F  M+E    P+   +  L+ G  +  +    
Sbjct: 440 HCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGG 499

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             L  +M+   V    +   ++  L   N +
Sbjct: 500 CMLFDEMERSGVANSQTRTRLIFHLCKANRV 530



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 173/331 (52%), Gaps = 1/331 (0%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +V T  +++  F   K   EA  L    +     P+V T+NV++   C   + +EA  ++
Sbjct: 58  SVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVI 117

Query: 193 DLMIQ-HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
             M + +GV P   T+N +L G C +G+V  A + F +  + GC   + +Y+ +++   K
Sbjct: 118 REMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAK 177

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           NK+I+ A++L  ++ + G  P +  +N L  GL ++ ++E A  L  ++  NG   D  T
Sbjct: 178 NKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 237

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y + IDGL K     EA +LF  + +     D   Y +LI GL ++G++  A  +++++ 
Sbjct: 238 YTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMT 297

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
               VP+VVT S MI GLC  G++  A  +F  ME   + PN + +  LI G  +  +  
Sbjct: 298 SQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 357

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             +E+L +MK+    PD    +I++D L K+
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGLCKS 388



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 114/212 (53%), Gaps = 8/212 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L ++ K+  TPD +T+  LI GLC    +  A A F ++   GC+PDV+TY  LV+G C
Sbjct: 362 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFC 421

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +  +T  A  +F++M++ +      C PN VTY T+I GLCK   + KA      MK++ 
Sbjct: 422 KAGNTDAACGVFDDMSSSH------CSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERG 475

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+   Y+S++ G C +        LF EM   GV  N  T   ++  LCK  ++DEA 
Sbjct: 476 CPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAV 534

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            L + + + G+ P  + YN+++     + +VN
Sbjct: 535 SLFNAIRKEGM-PHPYAYNSIISTLIKSAKVN 565



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 38/253 (15%)

Query: 223 AKELFVSMES--MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           A ELF  + S   G +H+V + + L++ + + K    A +L    L+    PDV   N L
Sbjct: 41  AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVL 100

Query: 281 FVGLFEIHQVERAFKLFDEMQRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
             G     + E AF +  EM+ + GVA                                 
Sbjct: 101 ITGYCLAREPEEAFAVIREMEEDYGVAPS------------------------------- 129

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
               ++ +N ++ GLCKSG++  A++ F +        ++ TY+ ++  L  + ++  A 
Sbjct: 130 ----LKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAV 185

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            L   +  N   P + T++ L+ G  ++    + I+LL K+ +    PD    + ++D L
Sbjct: 186 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 245

Query: 460 AKNEISLNSLPSF 472
            K + S  +   F
Sbjct: 246 GKEKRSFEAYKLF 258


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 228/441 (51%), Gaps = 7/441 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+  LI  LC    + +A  +  ++R  G    V+ Y +L+N  C+     +A+  
Sbjct: 370 PNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGF 429

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM     E G+   PN  +Y+ +I GLC++G +  A EL  +M +K +  N  T+T++
Sbjct: 430 LSEMV----EIGLT--PNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTAL 483

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC AK  +EA RLF +M +  ++PN VTFN +++  C  G + +A +L D M+  G+
Sbjct: 484 INGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGL 543

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD +TY +L+ G CLT   + AKE    +E+       FS + L++G+C+   +  A  
Sbjct: 544 TPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYH 603

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +++EM   G K D++    +     + H  E++  LF EM+  GV  D   +   I+   
Sbjct: 604 VWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYS 663

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G +V+A+  +  +       +   Y +L++ LCKS  L  A  L + +     +PN  
Sbjct: 664 KEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSY 723

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++  +     +G ++ A+DL+  M +   + N+++ + LI+GF ++ +  + I+L+ + 
Sbjct: 724 TFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRS 782

Query: 441 KEINVMPDASIVSIVVDLLAK 461
            E    PD    S V+  L K
Sbjct: 783 TENGFFPDCISYSTVIHELCK 803



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 213/449 (47%), Gaps = 6/449 (1%)

Query: 12  GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
           G + +  F P     + ++ GL  + R+ EA  L  +L      P++F Y  L+N +C+ 
Sbjct: 291 GDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKN 350

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                A  L  EM++         EPN VTY  +I  LCK G +D A  +L +M++K ++
Sbjct: 351 GMFSEADRLVNEMSDKG------LEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVR 404

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
             V  Y S+I   C   D + A     EM++ G+ PN  +++ ++  LC+ G +  A  L
Sbjct: 405 MTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVEL 464

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
              M + GV  + +T+  L++GFC   +++ A  LF  M     +    +++ +I GYC 
Sbjct: 465 HRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCL 524

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
             +I  A  LY +M+ +G+ PD   + +L  GL       +A +   +++ N    + ++
Sbjct: 525 VGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFS 584

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
               + G C+ G + EA  +++ + +   + D+ ++  ++    K    E +  LFR + 
Sbjct: 585 LTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMK 644

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+ V ++ MI     +G M +A + + +M  +  +PN +T+  L+    +    S
Sbjct: 645 EKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLS 704

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLA 460
               L  +M   + +P++   +  +D  A
Sbjct: 705 SAELLCKEMLASHFLPNSYTFNCFLDYFA 733



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 195/418 (46%), Gaps = 41/418 (9%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           AV +  LI GLC   R+ EA  +   +   G   D  T  TLV G CRT    +AL +  
Sbjct: 232 AVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTG 291

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           +MA      G V  P+    + ++DGL K+G V+                          
Sbjct: 292 DMA----RLGFV--PSEANCSFMLDGLRKKGRVE-------------------------- 319

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
                    EA RL  ++ +  + PN+  +N +++ +CKNG   EA RL++ M   G+ P
Sbjct: 320 ---------EAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEP 370

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           +  TY  L+   C  G ++ A  +   M   G + TV+ Y+ LIN  CK  +++ A+   
Sbjct: 371 NEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFL 430

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
           SEM+  G+ P+   ++ +  GL     +  A +L  +M   GVA +T+T+   I+G CK 
Sbjct: 431 SEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKA 490

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
             + EA  LF+ +     E +   +N++I+G C  G +  A +L+  + C  L P+  TY
Sbjct: 491 KKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTY 550

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
             +I GLC      KA++   D+E N  V N  +   L+ GF R    ++   + ++M
Sbjct: 551 RSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEM 608



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 218/460 (47%), Gaps = 6/460 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     V   +L      D VT  +L+ G C    +  A  +   +   G  P     +
Sbjct: 247 RVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCS 306

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++GL +      A  L  ++    GE  +V  PN   Y  +++ +CK G   +A  L+
Sbjct: 307 FMLDGLRKKGRVEEAFRLACQL----GELRMV--PNIFAYNALLNNMCKNGMFSEADRLV 360

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M DK ++PN VTY  +I   C     ++A  +   M ++GV+  V  +N +++  CK 
Sbjct: 361 NEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKK 420

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
             +D A   L  M++ G+ P+A +Y+ ++ G C  G ++ A EL   M   G     +++
Sbjct: 421 DDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTF 480

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LING+CK K+++ A  L+++M    ++P+ V  N +  G   +  + +AF+L+D+M  
Sbjct: 481 TALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMC 540

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  D +TYR+ I GLC      +A E    L       +  +  +L+ G C+ GRL  
Sbjct: 541 RGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTE 600

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  ++  +       ++++++I++         +K+  LF +M+E  V P+ +    +I 
Sbjct: 601 AYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMIN 660

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + +     + +    +M     +P+    + +V+ L K+
Sbjct: 661 MYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKS 700



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 173/361 (47%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+  T + I+  L K      A+ L   M    +  +   YT+ IR +C  ++ + AK L
Sbjct: 160 PDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGL 219

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M D+G + + V +NV++  LCKN ++ EA  + + M+  GV  D  T  TL+ GFC 
Sbjct: 220 VARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCR 279

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           T  ++ A E+   M  +G   +  + S +++G  K   +E A  L  ++    + P++  
Sbjct: 280 TEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFA 339

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L   + +      A +L +EM   G+  +  TY   I  LCK G + +A+ +   +R
Sbjct: 340 YNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMR 399

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                  +  YNSLI+  CK   L++A+     +    L PN  +YS +I GLC  G + 
Sbjct: 400 EKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLS 459

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A +L   M E  V  N  TF  LI GF +  +  +   L +KM E N+ P+    + V+
Sbjct: 460 GAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVI 519

Query: 457 D 457
           +
Sbjct: 520 E 520



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 191/403 (47%), Gaps = 20/403 (4%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  PD  T + ++  L +     +A +LF+ M +     GV+ +     YT  I   C+ 
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHS----GVLLD--EYVYTAGIRAYCEV 210

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
             +D AK L+ +M+D+  K + V Y  +I G C  +   EA  +   M+ +GV  + VT 
Sbjct: 211 RNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTC 270

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
             ++   C+  ++D A  +   M + G  P     + +LDG    GRV  A  L   +  
Sbjct: 271 RTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGE 330

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           +     +F+Y+ L+N  CKN     A  L +EM  KG++P+ V +  L   L +   ++ 
Sbjct: 331 LRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDD 390

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKN-------GYIVEAVELFHTLRILKCEFDIR 345
           A  + D M+  GV    + Y + I+  CK        G++ E VE+  T        +  
Sbjct: 391 ALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTP-------NAA 443

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           +Y+ +I GLC+ G L  A+EL R +    +  N  T++ +I G C   +MD+A  LF  M
Sbjct: 444 SYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKM 503

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            E+ + PN +TF+ +I G+  + +  K  +L  +M    + PD
Sbjct: 504 TESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPD 546



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 180/379 (47%), Gaps = 7/379 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +  ++ +S   P+ VTF ++I+G C    I +A  L+ ++   G  PD +TY +L++GLC
Sbjct: 499 LFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLC 558

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
            T     A     ++ N           N  + T ++ G C+EG + +A  +  +M    
Sbjct: 559 LTDGASKAKEFVADLENNCSVL------NKFSLTALLHGFCREGRLTEAYHVWNEMAMWG 612

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            K +++++T ++       D  ++  LF EM ++GV+P+ V    +++   K G M +A 
Sbjct: 613 GKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQAL 672

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
              D MI  G  P+  TY  L++  C +  ++ A+ L   M +       ++++  ++ +
Sbjct: 673 NCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYF 732

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
                +E A  LY  ML +G   ++V  NTL  G  ++ Q++ A  L      NG   D 
Sbjct: 733 ATEGNLETAKDLYFAML-QGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDC 791

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            +Y T I  LCK G I EA+EL++ +     + DI AYN LI      G  +  L ++  
Sbjct: 792 ISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYID 851

Query: 370 LPCGVLVPNVVTYSIMIGG 388
           +    + PN  T+  +  G
Sbjct: 852 MVKKGVQPNWHTHRALFVG 870



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 153/316 (48%), Gaps = 7/316 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  +++    TPD  T+ SLI GLC      +A      L       + F+
Sbjct: 525 VGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFS 584

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T L++G CR      A +++ EMA   G+       + +++T I+    K+   +K+  
Sbjct: 585 LTALLHGFCREGRLTEAYHVWNEMAMWGGKL------DLISFTIIVYAALKQHDSEKSCV 638

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +MK+K ++P+ V +T +I  +    +  +A   + EM+  G  PN VT+  +++ LC
Sbjct: 639 LFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLC 698

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+  +  A  L   M+     P+++T+N  LD F   G +  AK+L+ +M   G    + 
Sbjct: 699 KSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIV 757

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S + LI G+CK  +I+ A+ L S     G  PD + ++T+   L +   +  A +L++EM
Sbjct: 758 SVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEM 817

Query: 301 QRNGVAADTWTYRTFI 316
              GV  D   Y   I
Sbjct: 818 LYKGVKPDIVAYNILI 833



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 148/306 (48%), Gaps = 1/306 (0%)

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +  G+ P+  T + I+  L K  +   A  L D M+  GV  D + Y   +  +C    +
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + AK L   M+  G K +   Y++LI G CKN+ +  A+ + + ML++G+  D V   TL
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTL 273

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G     +++ A ++  +M R G           +DGL K G + EA  L   L  L+ 
Sbjct: 274 VYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM 333

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             +I AYN+L++ +CK+G    A  L   +    L PN VTY+I+I  LC  G MD A  
Sbjct: 334 VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALC 393

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS-IVVDLL 459
           +   M E  V   V  ++ LI    + ++    +  L +M EI + P+A+  S ++  L 
Sbjct: 394 MLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLC 453

Query: 460 AKNEIS 465
            K ++S
Sbjct: 454 RKGDLS 459



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 144/283 (50%), Gaps = 9/283 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++  + V   +       D ++FT ++     +    ++  LF +++  G  PD   +
Sbjct: 596 GRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFH 655

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           T ++N   +  + + ALN ++EM A+G+        PNTVTYT +++ LCK   +  A+ 
Sbjct: 656 TCMINMYSKEGNMVQALNCWDEMIADGH-------LPNTVTYTALVNNLCKSWHLSSAEL 708

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M   +  PN  T+   +  F    +   AK L+  M+ QG   N+V+ N ++   C
Sbjct: 709 LCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAML-QGFLANIVSVNTLIKGFC 767

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++ EA  L+    ++G  PD  +Y+T++   C  G +N A EL+  M   G K  + 
Sbjct: 768 KVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIV 827

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           +Y+ILI     + E +  L +Y +M+ KG++P+   H  LFVG
Sbjct: 828 AYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 28/229 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V  T +I     E  +++A   + ++   G  P+  TYT LVN LC++ H   A  L
Sbjct: 650 PDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELL 709

Query: 81  FEEM--------------------ANGNGE------FGVVCE--PNTVTYTTIIDGLCKE 112
            +EM                      GN E      F ++     N V+  T+I G CK 
Sbjct: 710 CKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKV 769

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G + +A +L+ +  +    P+ ++Y++VI   C   D NEA  L+ EM+ +GV+P++V +
Sbjct: 770 GQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAY 829

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           N+++     +G+ D+   +   M++ GV+P+  T+  L  G  L  + N
Sbjct: 830 NILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVGTSLMSKGN 878


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 228/454 (50%), Gaps = 34/454 (7%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++++   P+  TF  LI+ LC  + +  A  LF K+   GC+P+ FT   LV G CR   
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
           T  AL   +    GN         N V Y T++   CK+   D+A++L+ +M +K + P+
Sbjct: 202 TKQALEFVDGKMGGN--------VNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPD 253

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG----VQPNVVTFNVIMDELCKNGKMDEAS 189
           VVT+ S I   C A    EA R+F +M   G     +PNVVTFN+++   C+ G M+EA 
Sbjct: 254 VVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEAR 313

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L++ M + G      +YNT L G    G++   + +   M   G +  ++SY+I+++G 
Sbjct: 314 SLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGL 373

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+N  +  A  L   M+S G+ PD V + TL  G     +V  A  + +EM R G   +T
Sbjct: 374 CRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNT 433

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +T  T ++ L K G   EA E+   +     + D    N +++GLC++G LE A E+   
Sbjct: 434 YTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSE 493

Query: 370 L------------PCGVL----------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           +            P   L          VP+V+TY+ +I GLC  G++++A+  F++M  
Sbjct: 494 MWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMA 553

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
             + P+ +T+D  +  F +  + S  + +L  M+
Sbjct: 554 KNLHPDSVTYDTFVLNFCKQGKISSALRVLKDME 587



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 223/463 (48%), Gaps = 60/463 (12%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + V + +L+   C +    EA  L  ++   G  PDV T+ + ++ LCR      A  +F
Sbjct: 218 NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIF 277

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M   +GE G+  +PN VT+  ++ G C+EG +++A+ L+  MK      ++ +Y + +
Sbjct: 278 RDMQM-DGELGLP-KPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWL 335

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G        E + +  EM++ G++PN+ ++N++MD LC+N  M +A RL+DLM+ +GV 
Sbjct: 336 LGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVY 395

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF--------------------- 240
           PD  TY TLL G+C  G+V  AK +   M   GC    +                     
Sbjct: 396 PDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEM 455

Query: 241 -------SY-------SILINGYCKNKEIEGALSLYSEMLSKGIK--------------- 271
                  SY       +I++NG C+N E+E A  + SEM + G                 
Sbjct: 456 LQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSI 515

Query: 272 -------PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
                  PDV+ + TL  GL ++ ++E A K F EM    +  D+ TY TF+   CK G 
Sbjct: 516 HNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGK 575

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           I  A+ +   +    C   ++ YNSLI GL   G++     L   +    + P++ TY+ 
Sbjct: 576 ISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNN 635

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVV-PNVITFDMLIRGFIR 426
           MI  LC  G+   A  L  +M +  VV PNV +F +LI+ F +
Sbjct: 636 MINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCK 678



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 213/459 (46%), Gaps = 32/459 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++  G  VL  ++++   P+  ++  ++ GLC    +++A  L   +   G  PD  TY
Sbjct: 342 GKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTY 401

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++G C       A  +  EM          C PNT T  T+++ L KEG   +A+E+
Sbjct: 402 TTLLHGYCSKGKVFEAKAILNEMIRKG------CHPNTYTCNTLLNSLWKEGRKSEAEEM 455

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ--------------- 166
           L +M +K+ + + VT   V+ G C   +  +A  +  EM   G                 
Sbjct: 456 LQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSI 515

Query: 167 -------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
                  P+V+T+  +++ LCK GK++EA +    M+   + PD+ TY+T +  FC  G+
Sbjct: 516 HNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGK 575

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++ A  +   ME  GC  T+ +Y+ LI G     +I     L  EM  +GI PD+  +N 
Sbjct: 576 ISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNN 635

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNG-VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           +   L E  + + A  L  EM   G V+ +  +++  I   CK+G    A ELF  + + 
Sbjct: 636 MINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELF-DVALS 694

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFR-SLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
            C      Y+ + + L   G+L  A ELF  SL   +L  N + Y  +I  LC DG++D 
Sbjct: 695 VCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFM-YEDLIDKLCKDGRLDD 753

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           A  L   + +     +  +F  +I G  +     +  EL
Sbjct: 754 AHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 153/310 (49%), Gaps = 6/310 (1%)

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           L+ +M+  GV P   TFN+++  LC++  +D A  L D M + G +P+ FT   L+ GFC
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             GR   A E FV  + MG       Y+ L++ +CK    + A  L   M  KG+ PDVV
Sbjct: 198 RAGRTKQALE-FVDGK-MGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNG----VAADTWTYRTFIDGLCKNGYIVEAVEL 331
             N+    L    +V  A ++F +MQ +G       +  T+   + G C+ G + EA  L
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
             T++       + +YN+ + GL ++G+L     +   +    + PN+ +Y+I++ GLC 
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCR 375

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +  M  AR L   M  N V P+ +T+  L+ G+    +  +   +L++M      P+   
Sbjct: 376 NHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYT 435

Query: 452 VSIVVDLLAK 461
            + +++ L K
Sbjct: 436 CNTLLNSLWK 445



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 187/440 (42%), Gaps = 95/440 (21%)

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT--------- 171
           L   M    + P   T+  +I+  C +   + A+ LF +M ++G QPN  T         
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 172 ------------------------FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                                   +N ++   CK    DEA +L++ M + G+ PD  T+
Sbjct: 198 RAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTF 257

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMG----CKHTVFSYSILINGYCKNKEIEGALSL-- 261
           N+ +   C  G+V  A  +F  M+  G     K  V ++++++ G+C+   +E A SL  
Sbjct: 258 NSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVE 317

Query: 262 ---------------------------------YSEMLSKGIKPDVVIHNTLFVGLFEIH 288
                                              EM+  GI+P++  +N +  GL   H
Sbjct: 318 TMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNH 377

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
            +  A +L D M  NGV  DT TY T + G C  G + EA  + + +    C  +    N
Sbjct: 378 MMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCN 437

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM--- 405
           +L++ L K GR   A E+ + +       + VT +I++ GLC +G+++KA ++  +M   
Sbjct: 438 TLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTD 497

Query: 406 ------EENAV-------------VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
                 +EN V             VP+VIT+  LI G  ++ +  +  +   +M   N+ 
Sbjct: 498 GTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLH 557

Query: 447 PDA-SIVSIVVDLLAKNEIS 465
           PD+ +  + V++   + +IS
Sbjct: 558 PDSVTYDTFVLNFCKQGKIS 577



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 124/254 (48%), Gaps = 6/254 (2%)

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           R ++   L+  M   G     +++++LI   C++  ++ A  L+ +M  KG +P+     
Sbjct: 131 RPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVG 190

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L  G     + ++A +  D   + G   +   Y T +   CK     EA +L   +   
Sbjct: 191 ILVRGFCRAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEK 248

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVLVPNVVTYSIMIGGLCNDGQ 394
               D+  +NS I  LC++G++  A  +FR +      G+  PNVVT+++M+ G C +G 
Sbjct: 249 GLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGM 308

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           M++AR L   M++     ++ +++  + G +R  +  +   +L +M E  + P+    +I
Sbjct: 309 MEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNI 368

Query: 455 VVDLLAKNEISLNS 468
           V+D L +N + L++
Sbjct: 369 VMDGLCRNHMMLDA 382



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 16/235 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    VL  + ++  +    T+ SLI GL ++ +I E   L  ++R  G  PD+ TY
Sbjct: 574 GKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTY 633

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N LC    T  A +L  EM +     GVV  PN  ++  +I   CK G    A EL
Sbjct: 634 NNMINCLCEGGKTKDATSLLHEMLDK----GVV-SPNVSSFKILIKAFCKSGDFKVACEL 688

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK-----DWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
                  ++  +V  +   +    + +       ++AK LF   +++ +      +  ++
Sbjct: 689 F------DVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLI 742

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           D+LCK+G++D+A  LL  +I  G   D  ++  ++DG    G    A EL   ME
Sbjct: 743 DKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIME 797


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 237/439 (53%), Gaps = 10/439 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P++VTF+ LI+       + +A   + K+   G  P VF   T++ G  +      AL 
Sbjct: 370 SPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALK 429

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF+E    + E G+    N     TI+  LCK+G +DKA ELL +M+ + I PNVV+Y +
Sbjct: 430 LFDE----SFETGLA---NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNN 482

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V+   C  K+ + A+ +F  M+++G++PN  T+++++D   KN        +++ M    
Sbjct: 483 VMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSN 542

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILINGYCKNKEIEG 257
           +  +   Y T+++G C  G+ + A+EL  +M  E   C  +  SY+ +I+G+ K  E++ 
Sbjct: 543 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCV-SCMSYNSIIDGFIKEGEMDY 601

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A++ Y EM + GI P+V+ + +L  GL + +++++A ++ DEM+  GV  D   Y   I 
Sbjct: 602 AVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIH 661

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G CK   +  A  LF  L           YNSLI G    G +  AL+L++ +    L  
Sbjct: 662 GFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 721

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           ++ TY+ +I GL  +G +  A DL+ +M+   +VP+ I + +++ G  +  +  KV+++ 
Sbjct: 722 DLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMF 781

Query: 438 HKMKEINVMPDASIVSIVV 456
            +MK+ NV P+  I + V+
Sbjct: 782 EEMKKNNVTPNVLIYNAVI 800



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 219/410 (53%), Gaps = 7/410 (1%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           +++  LC + +I +A  L  K+   G  P+V +Y  ++   CR  +  +A  +F  M   
Sbjct: 447 TILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNML-- 504

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
             E G+  +PN  TY+ +IDG  K        E++ QM   NI+ N V Y ++I G C  
Sbjct: 505 --EKGL--KPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKV 560

Query: 148 KDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              ++A+ L   M+++     + +++N I+D   K G+MD A    + M  +G+ P+  T
Sbjct: 561 GQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVIT 620

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y +L+DG C   R++ A E+   M++ G K  + +Y  LI+G+CK   +E A +L+SE+L
Sbjct: 621 YTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELL 680

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +G+ P   ++N+L  G   +  +  A  L+ +M ++G+  D  TY T IDGL K G ++
Sbjct: 681 EEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLI 740

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            A +L+  ++ +    D   Y  +++GL K G+    +++F  +    + PNV+ Y+ +I
Sbjct: 741 LASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 800

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            G   +G +D+A  L  +M +  ++P+  TFD+L+ G +   +P +   L
Sbjct: 801 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPIRAASL 850



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 228/471 (48%), Gaps = 42/471 (8%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T   L++    E +  EA  +F++    G EPD   Y+  V   C+T +  +A +L 
Sbjct: 231 DNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLL 290

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM         +C P+  TYT++I    K+G ++ A     +M    I  NVV  TS+I
Sbjct: 291 REMKEKK-----LCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLI 345

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C   D   A  LF +M ++G  PN VTF+V+++   KNG+M++A      M   G+ 
Sbjct: 346 TGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLT 405

Query: 202 PDAFTYNTLLDGF----------------------------------CLTGRVNHAKELF 227
           P  F  +T++ G+                                  C  G+++ A EL 
Sbjct: 406 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELL 465

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             MES G    V SY+ ++  +C+ K ++ A +++S ML KG+KP+   ++ L  G F+ 
Sbjct: 466 RKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKN 525

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR-- 345
           H  +   ++ ++M  + +  +   Y+T I+GLCK G   +A EL   + I +  F +   
Sbjct: 526 HDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM-IEEKRFCVSCM 584

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           +YNS+IDG  K G ++ A+  +  +    + PNV+TY+ ++ GLC + +MD+A ++  +M
Sbjct: 585 SYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEM 644

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +   V  ++  +  LI GF + +       L  ++ E  + P   + + ++
Sbjct: 645 KNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLI 695



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 238/482 (49%), Gaps = 43/482 (8%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K    P   T+TS+I     +  + +A     ++   G   +V   T+L+ G C+ +   
Sbjct: 296 KKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLG 355

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            AL+LF +M N          PN+VT++ +I+   K G ++KA E   +M+   + P+V 
Sbjct: 356 SALDLFYKMENEGP------SPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVF 409

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
              ++I+G+   +   EA +LF E  + G+  NV   N I+  LCK GK+D+A+ LL  M
Sbjct: 410 HVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLRKM 468

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ P+  +YN ++   C    ++ A+ +F +M   G K   ++YSILI+G  KN + 
Sbjct: 469 ESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDE 528

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL------------------- 296
           +  L + ++M S  I+ + V++ T+  GL ++ Q  +A +L                   
Sbjct: 529 QNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNS 588

Query: 297 -----------------FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
                            ++EM  NG++ +  TY + +DGLCKN  + +A+E+   ++   
Sbjct: 589 IIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKG 648

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + DI AY +LI G CK   +E A  LF  L    L P+   Y+ +I G  N G M  A 
Sbjct: 649 VKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAAL 708

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           DL+  M ++ +  ++ T+  LI G ++        +L  +M+ + ++PD  + +++V+ L
Sbjct: 709 DLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGL 768

Query: 460 AK 461
           +K
Sbjct: 769 SK 770



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 199/452 (44%), Gaps = 42/452 (9%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
           L T    +G   D+     L+  +  ++ T +A  L   + +    FG   E N+  +  
Sbjct: 115 LVTSPETYGRASDL-----LIRYVSTSNPTPMASVLVSNLVDSAKLFGF--EVNSRAFNY 167

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           +++   K+   D A +++ QM +  + P V      +          EAK L+  M+  G
Sbjct: 168 LLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIG 227

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V  +  T  ++M    +  K  EA  +    I+ G  PD+  Y+  +   C T  +  A 
Sbjct: 228 VDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMAN 287

Query: 225 ELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            L   M E   C  +  +Y+ +I    K   +E A+    EM+S GI  +VV   +L  G
Sbjct: 288 SLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITG 347

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF----------- 332
             + + +  A  LF +M+  G + ++ T+   I+   KNG + +A+E +           
Sbjct: 348 HCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPS 407

Query: 333 ----HT-----LRILKCEFDIRAY--------------NSLIDGLCKSGRLEIALELFRS 369
               HT     L+  K E  ++ +              N+++  LCK G+++ A EL R 
Sbjct: 408 VFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRK 467

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + PNVV+Y+ ++   C    MD AR +F +M E  + PN  T+ +LI G  + ++
Sbjct: 468 MESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHD 527

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              V+E++++M   N+  +  +   +++ L K
Sbjct: 528 EQNVLEVVNQMTSSNIEVNGVVYQTIINGLCK 559



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 142/297 (47%), Gaps = 7/297 (2%)

Query: 1   MGRVSHGFVVLGRILKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +G+ S    +L  +++   F    +++ S+I G   E  +  A A + ++   G  P+V 
Sbjct: 560 VGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVI 619

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TYT+L++GLC+ +    AL + +EM N   +  +        Y  +I G CK+  ++ A 
Sbjct: 620 TYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPA------YGALIHGFCKKSNMESAS 673

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L  ++ ++ + P+   Y S+I GF    +   A  L+ +M+  G++ ++ T+  ++D L
Sbjct: 674 ALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 733

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K G +  AS L   M   G+ PD   Y  +++G    G+     ++F  M+       V
Sbjct: 734 LKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV 793

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             Y+ +I G+ +   ++ A  L+ EML KGI PD    + L  G     Q  RA  L
Sbjct: 794 LIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPIRAASL 850



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/310 (22%), Positives = 121/310 (39%), Gaps = 36/310 (11%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G + N   FN +++   K+ + D A  +++ M++ GV P     N  L        +  A
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           KEL+  M ++G      +  +L+    + ++   AL ++S  + +G +PD ++       
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLL------- 269

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEF 342
                                       Y   +   CK   +  A  L   ++  K C  
Sbjct: 270 ----------------------------YSLAVQACCKTLNLAMANSLLREMKEKKLCVP 301

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
               Y S+I    K G +E A+     +    +  NVV  + +I G C +  +  A DLF
Sbjct: 302 SQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLF 361

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             ME     PN +TF +LI  F +  E  K +E   KM+ + + P    V  ++    K 
Sbjct: 362 YKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKG 421

Query: 463 EISLNSLPSF 472
           +    +L  F
Sbjct: 422 QKHEEALKLF 431


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 245/508 (48%), Gaps = 34/508 (6%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR--- 70
           ++K    P  VTF +++   C E  +  A  +   +R+FGC+P+  +Y  LVNGL     
Sbjct: 198 MIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGE 257

Query: 71  ------------------TSHTIVAL-------NLFEEMANGNGE-FGVVCEPNTVTYTT 104
                             ++HT   L        +FEE  +   E  G    P  VTY T
Sbjct: 258 FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNT 317

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           I+  LC+ G V  A+  L  M ++++ P++V+Y ++I G+    ++ EA  LF E+  + 
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + P+VVT+N ++D  C+ G +D A  + D MI+HG+ PD  T+  L+ GFC  G +  AK
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAK 437

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           ELF  M S G K    +Y+  I G  K      A  +  EM ++G  PD++ +N L  GL
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGL 497

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            ++   + A +L  +M+  G+  D  TY + I     +G + +A E+F  +        +
Sbjct: 498 CKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSV 557

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y  LI      GRL+ A + F  +    + PNV+TY+ +I GLC +  MD A +LF +
Sbjct: 558 VTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAE 617

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE- 463
           ME   V PN  T+ +LI     +      ++L   M +  + PD+   S ++  L+K+  
Sbjct: 618 MESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYK 677

Query: 464 ----ISLNSLPSFTVHEQQEEVDESNVK 487
               + L +LP   V      + E  VK
Sbjct: 678 LLAVLRLENLPLAIVEINSTWIAEGFVK 705



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 202/375 (53%), Gaps = 7/375 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRVS     L  ++     PD V++ +LI G        EA  LF++LR     P V T
Sbjct: 325 LGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVT 384

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G CRT +  +A  + ++M         +C P+ VT+T ++ G C+ G +  AKE
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHG-----LC-PDVVTFTILVRGFCQMGNLPMAKE 438

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  + +KP+ + YT+ I G     + ++A  +  EM  +G  P+++T+NV+++ LC
Sbjct: 439 LFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLC 498

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G  D+A+ L+  M   G+ PD  TY +++    ++G +  A+E+F  M   G   +V 
Sbjct: 499 KLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVV 558

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++LI+ Y     ++ A   + EM  KG+ P+V+ +N L  GL + + ++ A+ LF EM
Sbjct: 559 TYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEM 618

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  GV+ + +TY   I+      Y  +A++L+  +   + + D   +++L+  L K  +L
Sbjct: 619 ESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKL 678

Query: 361 EIALELFRSLPCGVL 375
              L L  +LP  ++
Sbjct: 679 LAVLRL-ENLPLAIV 692



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 190/374 (50%), Gaps = 4/374 (1%)

Query: 92  GVVCEPNTVTYTTIIDGL----CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
           G+ C  N+     ++D L     K+  ++K   +  +M +  + P+V     V++     
Sbjct: 126 GIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDK 185

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
              NE + ++  M+   ++P +VTFN +MD  CK G++  A  +LD+M   G  P+  +Y
Sbjct: 186 SMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSY 245

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L++G    G  + AKEL   M  +G K +  +Y+ LI G+CK +  E A  L  EML 
Sbjct: 246 NVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG 305

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G  P VV +NT+   L  + +V  A +  D M    +  D  +Y T I G  + G   E
Sbjct: 306 RGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAE 365

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A+ LF  LR       +  YN+LIDG C++G L+IA  +   +    L P+VVT++I++ 
Sbjct: 366 ALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVR 425

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           G C  G +  A++LF +M    + P+ I +   I G +++  PSK   +  +MK     P
Sbjct: 426 GFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPP 485

Query: 448 DASIVSIVVDLLAK 461
           D    +++++ L K
Sbjct: 486 DLITYNVLINGLCK 499


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 199/351 (56%), Gaps = 6/351 (1%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           ++  V   C+ S    A+ L +EM N   +      P+ VTY  +I+G+CKEG +D+A +
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSK------PDVVTYNVLINGICKEGRLDEAIK 138

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L  M     +PNV+T+  ++R  C    W +A++L  +M+ +G  P+VVTFN++++ LC
Sbjct: 139 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 198

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G +  A  +L+ M  HG  P++ +YN LL GFC   +++ A E    M S GC   + 
Sbjct: 199 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 258

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L+   CK+ +++ A+ + +++ SKG  P ++ +NT+  GL ++ + ERA KL DEM
Sbjct: 259 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 318

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +R G+  D  TY + + GL + G + EA++ FH L  L    +   YNS++ GLCKS + 
Sbjct: 319 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 378

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           + A++    +      P   TY+I+I G+  +G   +A DL  ++    +V
Sbjct: 379 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 190/358 (53%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           ++  +   CKE  V +A +LL +M++K  KP+VVTY  +I G C     +EA +    M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
             G QPNV+T N+I+  +C  G+  +A +LL  M++ G  P   T+N L++  C  G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A ++   M   GC     SY+ L++G+CK K+++ A+     M+S+G  PD+V +NTL 
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L +  +V+ A ++ +++   G +    TY T IDGL K G    A++L   +R    +
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            DI  Y+SL+ GL + G+++ A++ F  L    + PN +TY+ ++ GLC   Q D+A D 
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
              M      P   T+ +LI G        + ++LL+++    ++  +S   +   +L
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAAPVL 442



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 183/358 (51%), Gaps = 8/358 (2%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           + L  CF+    +F   ++  C ES + +A  L  ++R  G +PDV TY  L+NG+C+  
Sbjct: 74  QTLFPCFSLSGFSF--YVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 131

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+     M +    +G  C+PN +T+  I+  +C  G    A++LL  M  K   P
Sbjct: 132 RLDEAIKFLNNMPS----YG--CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 185

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +VVT+  +I   C       A  +  +M   G  PN +++N ++   CK  KMD A   L
Sbjct: 186 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 245

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D+M+  G  PD  TYNTLL   C  G+V+ A E+   + S GC   + +Y+ +I+G  K 
Sbjct: 246 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 305

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            + E A+ L  EM  KG+KPD++ +++L  GL    +V+ A K F +++  G+  +  TY
Sbjct: 306 GKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITY 365

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            + + GLCK+     A++    +   +C+     Y  LI+G+   G  + AL+L   L
Sbjct: 366 NSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 184/333 (55%)

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           ++  ++  C      +A +L  EM ++G +P+VVT+NV+++ +CK G++DEA + L+ M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
            +G +P+  T+N +L   C TGR   A++L   M   GC  +V +++ILIN  C+   + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+ +  +M   G  P+ + +N L  G  +  +++RA +  D M   G   D  TY T +
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
             LCK+G +  AVE+ + L    C   +  YN++IDGL K G+ E A++L   +    L 
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+++TYS ++ GL  +G++D+A   F D+E   + PN IT++ ++ G  +  +  + I+ 
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           L  M      P  +  +I+++ +A   ++  +L
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 417



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 158/308 (51%), Gaps = 6/308 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+      L  +      P+ +T   +++ +C+  R M+A  L + +   GC P V T+
Sbjct: 131 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 190

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N LCR      A+++ E+M          C PN+++Y  ++ G CKE  +D+A E 
Sbjct: 191 NILINFLCRQGLLGRAIDILEKMPMHG------CTPNSLSYNPLLHGFCKEKKMDRAIEY 244

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  +   P++VTY +++   C     + A  +  ++  +G  P ++T+N ++D L K
Sbjct: 245 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 304

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK + A +LLD M + G++PD  TY++L+ G    G+V+ A + F  +E +G +    +
Sbjct: 305 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 364

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++ G CK+++ + A+   + M+SK  KP    +  L  G+      + A  L +E+ 
Sbjct: 365 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 424

Query: 302 RNGVAADT 309
             G+   +
Sbjct: 425 SRGLVKKS 432



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 6/125 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      +L  + +    PD +T++SL+ GL  E ++ EA   F  L   G  P+  T
Sbjct: 305 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 364

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +++ GLC++  T  A++    M +        C+P   TYT +I+G+  EG   +A +
Sbjct: 365 YNSIMLGLCKSRQTDRAIDFLAYMISKR------CKPTEATYTILIEGIAYEGLAKEALD 418

Query: 121 LLLQM 125
           LL ++
Sbjct: 419 LLNEL 423



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 57/121 (47%)

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           F +  ++  +   CK   +  A++L   +      P+VVTY+++I G+C +G++D+A   
Sbjct: 80  FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +M      PNVIT ++++R            +LL  M      P     +I+++ L +
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 199

Query: 462 N 462
            
Sbjct: 200 Q 200


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 233/475 (49%), Gaps = 41/475 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR------------ 50
           R      VLG++      PD +T+ +++ GLC + R+ EA  L   ++            
Sbjct: 212 RFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFN 271

Query: 51  --VFGC---------------------EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
             V GC                      PD +TY  +++G C+      A+ L EEM N 
Sbjct: 272 ILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMEN- 330

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                +   P+ VTY T+I+G  + G  ++  +L+ +M+ + +KPN VTY  +++ F   
Sbjct: 331 -----LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKK 385

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
              +E  +   +M + G  P++VT+N ++   CK GKMDEA RL+D M + G++ D  T 
Sbjct: 386 GKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTL 445

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           NT+L   C   +++ A +L  S    G      SY  LI GY K+++   AL L+ EM  
Sbjct: 446 NTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKE 505

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           K I P ++ +N++  GL ++ +  +A    DE+  +G+  D  TY T I G C+ G + +
Sbjct: 506 KEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEK 565

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A +  + +     + D+   N+L+ GLCK G LE AL+LF +        + V+Y+ +I 
Sbjct: 566 AFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIIL 625

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
            LC + +  +A DL  +MEE  + P+  T++ ++ G           E + K+ E
Sbjct: 626 SLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAE 680



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 232/452 (51%), Gaps = 34/452 (7%)

Query: 30  IKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR--TSHTI------------ 75
           I    A  R  +AA +F +++  G +P + T  TL+N L R  +SH+I            
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 76  ----VALNLFEEMANGN---GEFGVV-----------CEPNTVTYTTIIDGLCKEGFVDK 117
               +  N F  + +G+     FG             C P+ +TY TI+DGLCK+G +++
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIM 176
           A++LLL MK+K + PN  T+  ++ G C      EA  + IE+M Q  V P+  T+NV++
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANV-IELMSQNSVVPDAWTYNVMI 309

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              CK G++ EA RL + M    + PD  TYNTL++G    G      +L   ME  G K
Sbjct: 310 SGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMK 369

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +Y++++  + K  +++       +M   G  PD+V +NTL     ++ +++ AF+L
Sbjct: 370 PNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRL 429

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            DEM R G+  D  T  T +  LC+   + EA +L  + R      D  +Y +LI G  K
Sbjct: 430 MDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFK 489

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
             +   AL L+  +    ++P+++TY+ MI GLC  G+ ++A D   ++ E+ +VP+ IT
Sbjct: 490 HEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEIT 549

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           ++ +I G+ +  +  K  +  +KM E N  PD
Sbjct: 550 YNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPD 581



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 227/432 (52%), Gaps = 10/432 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           +F  LI G C E+R  EA  +  K+R +GC PD  TY T+++GLC+      A +L  +M
Sbjct: 199 SFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDM 258

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            N  G F     PN  T+  ++ G C+ G++ +A  ++  M   ++ P+  TY  +I GF
Sbjct: 259 KN-KGLF-----PNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGF 312

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C      EA RL  EM +  + P+VVT+N +++   ++G  +E  +L++ M   G++P++
Sbjct: 313 CKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNS 372

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TYN ++  F   G+++   +    ME  GC   + +Y+ LI+ +CK  +++ A  L  E
Sbjct: 373 VTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDE 432

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  KG+K D V  NT+   L    +++ A  L    +R G   D  +Y T I G  K+  
Sbjct: 433 MGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEK 492

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
             +A+ L+  ++  +    I  YNS+I GLC+ G+   A++    L    LVP+ +TY+ 
Sbjct: 493 ASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNT 552

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH----KM 440
           +I G C +GQ++KA      M E    P+V+T + L+ G  +     K ++L +    K 
Sbjct: 553 IIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKG 612

Query: 441 KEINVMPDASIV 452
           K+++ +   +I+
Sbjct: 613 KDVDAVSYNTII 624



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 207/413 (50%), Gaps = 6/413 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     V+  + ++   PDA T+  +I G C + RI EA  L  ++      PDV T
Sbjct: 280 LGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVT 339

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG      +     L EEM       G   +PN+VTY  ++    K+G +D+  +
Sbjct: 340 YNTLINGCFEHGSSEEGFKLIEEME------GRGMKPNSVTYNVMVKWFVKKGKMDEVDK 393

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            + +M++    P++VTY ++I   C     +EA RL  EM  +G++ + VT N ++  LC
Sbjct: 394 TVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALC 453

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  K+DEA  LL    + G   D  +Y TL+ G+    + + A  L+  M+      ++ 
Sbjct: 454 RERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSII 513

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I G C+  +   A+    E+L  G+ PD + +NT+  G  +  QVE+AF+  ++M
Sbjct: 514 TYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKM 573

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                  D  T  T + GLCK G + +A++LF+T      + D  +YN++I  LCK  R 
Sbjct: 574 VEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRF 633

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
             A +L   +    L P+  TY+ ++GGL + G+M  A +    + E     N
Sbjct: 634 GEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN 686



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 6/219 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V++ +LI G     +  +A  L+ +++     P + TY +++ GLC+   T  A++  
Sbjct: 476 DEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKL 535

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +E+     E G+V  P+ +TY TII G C+EG V+KA +   +M +KN KP+VVT  +++
Sbjct: 536 DELL----ESGLV--PDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLL 589

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C      +A +LF   + +G   + V++N I+  LCK  +  EA  LL+ M +  + 
Sbjct: 590 CGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLG 649

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           PD +TYN +L G    GR+  A+E    +   G     F
Sbjct: 650 PDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQF 688



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 29/207 (14%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+ +     L  +L+S   PD +T+ ++I G C E ++ +A     K+     +PDV T
Sbjct: 525 MGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVT 584

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             TL+ GLC+      AL LF    +   +       + V+Y TII  LCKE    +A +
Sbjct: 585 CNTLLCGLCKEGMLEKALKLFNTWISKGKDV------DAVSYNTIILSLCKEKRFGEAFD 638

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---------------- 164
           LL +M++K + P+  TY +++ G   A    +A+    ++ ++G                
Sbjct: 639 LLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDAR 698

Query: 165 -------VQPNVVTFNVIMDELCKNGK 184
                    PN + ++  ++ELC  G+
Sbjct: 699 TSEIPQEPHPNAIAYSNKINELCSQGR 725


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 228/499 (45%), Gaps = 65/499 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F + GR+++    P  VTF  LI GL    R  E  A+  ++  FG  P+   Y
Sbjct: 265 GRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIY 324

Query: 62  TTLVNGLCRTSH------------------TIVALNL-----------------FEEMA- 85
             L+   CR  H                  T+V  NL                  +EM  
Sbjct: 325 NQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLL 384

Query: 86  ------------------NGNGEFGVVC-----------EPNTVTYTTIIDGLCKEGFVD 116
                              G G   VV            +PN    T  I  LCK G  +
Sbjct: 385 AGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHE 444

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A E+   +  K +  N+ T  ++I G C   +  EA ++   M+D GV+ + +T+N+++
Sbjct: 445 EAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMI 504

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              CK  KM+EA +L D MI+ G +PD FT+NT L  +C  G+V     L   M+S G K
Sbjct: 505 QFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLK 564

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             + +Y  +I+GYCK K++  A     E++  G++P+ VI+N L  G      +  A  +
Sbjct: 565 PDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGV 624

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            D M+ NG+     TY + +  +C  G + EA E+F    +   E  +  Y  +I G CK
Sbjct: 625 LDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCK 684

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G+++ A+  F+ +    + PN +TY+ ++   C  G  ++A  LF +M  + +VP+ ++
Sbjct: 685 IGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVS 744

Query: 417 FDMLIRGFIRINEPSKVIE 435
           ++ LI G   ++   K++E
Sbjct: 745 YNTLISGCCEVDSLDKIVE 763



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 220/518 (42%), Gaps = 77/518 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   FV+L  + +S   P  VT+  L+  LC   R+ EA  L  ++      P + T+
Sbjct: 230 GEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTF 289

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGL R         + +EM      FG+   PN V Y  +I   C+EG   +A  L
Sbjct: 290 GILINGLARGQRFGEVDAVLQEMEG----FGIT--PNEVIYNQLIGWHCREGHCSEALRL 343

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK--------------------------- 154
             +M  K IK  VVTY  + +  C   +   A+                           
Sbjct: 344 FDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLR 403

Query: 155 ---------RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                    RL  EM+ + ++PN       + ELCK GK +EA+ +  L++  G+  +  
Sbjct: 404 GTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIA 463

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T N L+ G C    +  A ++  +M   G +    +Y+I+I   CK  ++E A+ L  +M
Sbjct: 464 TSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDM 523

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK---- 321
           + +G KPD+   NT       + +VE    L D+M+  G+  D  TY T IDG CK    
Sbjct: 524 IKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDV 583

Query: 322 -------------------------------NGYIVEAVELFHTLRILKCEFDIRAYNSL 350
                                          NG I +A+ +  T++    +     YNSL
Sbjct: 584 HKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSL 643

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           +  +C +G +E A E+F       +   V+ Y+I+I G C  G++D+A   F +M    +
Sbjct: 644 MYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDI 703

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            PN +T+  L+  + +     +  +L  +M    ++PD
Sbjct: 704 RPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPD 741



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 204/429 (47%), Gaps = 7/429 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD  T+T +IK LC    I  A  +  +L   G +P V TY  L++ LCR+     A  
Sbjct: 213 APDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQ 272

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M  G         P+ VT+  +I+GL +     +   +L +M+   I PN V Y  
Sbjct: 273 LKGRMVEGR------LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQ 326

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C     +EA RLF EM+ +G++  VVT+N+I   LCK G+M+ A ++LD M+  G
Sbjct: 327 LIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAG 386

Query: 200 VRPDAFTYNTLLDGFCL-TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           +      +N+++      TGR++    L   M +   K      +  I   CK  + E A
Sbjct: 387 MTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEA 446

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             ++  +L KG+  ++   N L  GL + + ++ A K+   M  +GV  D  TY   I  
Sbjct: 447 AEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQF 506

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK   + EA++L   +     + D+  +N+ +   C  G++E  L L   +    L P+
Sbjct: 507 CCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPD 566

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +VTY  +I G C    + KA    +++ +N + PN + ++ LI G+ R    S  I +L 
Sbjct: 567 IVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLD 626

Query: 439 KMKEINVMP 447
            MK   + P
Sbjct: 627 TMKHNGIQP 635



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 202/421 (47%), Gaps = 14/421 (3%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           AA  F +L   G  P + T   LV  L       +A  +F EM +GN        P+  T
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNA-----VAPDVYT 218

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           YT +I  LC+ G +D A  +L +++   I+P VVTY  ++   C +    EA +L   M+
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           +  ++P++VTF ++++ L +  +  E   +L  M   G+ P+   YN L+   C  G  +
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  LF  M S G K TV +Y+++    CK  E+E A  +  EML  G+     +H +LF
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGM----TVHCSLF 394

Query: 282 VGLFEIH-----QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
             +   H     +++   +L  EM    +  +       I  LCK G   EA E++  + 
Sbjct: 395 NSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVL 454

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 +I   N+LI GLC+   ++ A ++ +++    +  + +TY+IMI   C   +M+
Sbjct: 455 GKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKME 514

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A  L  DM +    P++ TF+  +R +  + +   ++ LL +MK   + PD      ++
Sbjct: 515 EAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTII 574

Query: 457 D 457
           D
Sbjct: 575 D 575



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 210/445 (47%), Gaps = 8/445 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +P   T   L++ L    ++  A  +F ++R      PDV+TYT ++  LCR      A 
Sbjct: 177 SPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAF 236

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            +  E+           +P  VTY  ++D LC+ G V++A +L  +M +  ++P++VT+ 
Sbjct: 237 VMLAELERSG------IQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFG 290

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G    + + E   +  EM   G+ PN V +N ++   C+ G   EA RL D M+  
Sbjct: 291 ILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSK 350

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK-HTVFSYSILINGYCKNKEIEG 257
           G++    TYN +    C  G + HA+++   M   G   H     S++         ++ 
Sbjct: 351 GIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDV 410

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
            L L  EM+++ +KP+  +       L +  + E A +++  +   G+  +  T    I 
Sbjct: 411 VLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIH 470

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLC+   + EA ++   +     EFD   YN +I   CK+ ++E A++L   +      P
Sbjct: 471 GLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKP 530

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           ++ T++  +   CN G+++    L   M+   + P+++T+  +I G+ +  +  K  + L
Sbjct: 531 DLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYL 590

Query: 438 HKMKEINVMPDASIVSIVVDLLAKN 462
            ++ +  + P+A I + ++    +N
Sbjct: 591 IELIKNGLRPNAVIYNALIGGYGRN 615



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 6/292 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL  ++ S    D +T+  +I+  C  S++ EA  L   +   G +PD+FT+ T +   C
Sbjct: 484 VLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYC 543

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                   L+L ++M +         +P+ VTY TIIDG CK   V KA + L+++    
Sbjct: 544 NLGKVEDILHLLDQMKSEG------LKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNG 597

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           ++PN V Y ++I G+      ++A  +   M   G+QP  +T+N +M  +C  G ++EA 
Sbjct: 598 LRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAK 657

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +    I   +      Y  ++ GFC  G+++ A   F  M     +    +Y+ L+  Y
Sbjct: 658 EIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAY 717

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           CK    E A  L+ EM+S GI PD V +NTL  G  E+  +++  +   EM 
Sbjct: 718 CKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMS 769



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 164/351 (46%), Gaps = 2/351 (0%)

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVT 171
           G +  A +  L++  +   P++ T   ++         + A+++F EM D   V P+V T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           + V++  LC+ G++D A  +L  + + G++P   TYN L+D  C +GRV  A +L   M 
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
               + ++ ++ ILING  + +      ++  EM   GI P+ VI+N L           
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +LFDEM   G+     TY      LCK G +  A ++   + +         +NS++
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 352 DG-LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
              L  +GRL++ L L R +    L PN    +  I  LC  G+ ++A +++  +    +
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             N+ T + LI G  + N   +  ++L  M +  V  D    +I++    K
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCK 509



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 8/255 (3%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++K  F PD  TF + ++  C   ++ +   L  +++  G +PD+ TY T+++G C+   
Sbjct: 523 MIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 582

Query: 74  TIVALN-LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
              A   L E + NG         PN V Y  +I G  + G +  A  +L  MK   I+P
Sbjct: 583 VHKANKYLIELIKNG-------LRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQP 635

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
             +TY S++   C+A    EAK +F + + + ++  V+ + +I+   CK GK+DEA    
Sbjct: 636 TPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYF 695

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M    +RP+  TY TL+  +C  G    A +LF  M S G      SY+ LI+G C+ 
Sbjct: 696 KEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEV 755

Query: 253 KEIEGALSLYSEMLS 267
             ++  +   +EM S
Sbjct: 756 DSLDKIVESPAEMSS 770



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 116/232 (50%), Gaps = 6/232 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L ++      PD VT+ ++I G C    + +A     +L   G  P+   
Sbjct: 545 LGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVI 604

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ G  R      A+ + + M + NG      +P  +TY +++  +C  G V++AKE
Sbjct: 605 YNALIGGYGRNGSISDAIGVLDTMKH-NG-----IQPTPITYNSLMYWMCHAGLVEEAKE 658

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  Q   KNI+  V+ YT +I+GFC     +EA   F EM  + ++PN +T+  +M   C
Sbjct: 659 IFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYC 718

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           K G  +EA +L D M+  G+ PD  +YNTL+ G C    ++   E    M S
Sbjct: 719 KCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 5/196 (2%)

Query: 250 CKNKEIEGALS----LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR-NG 304
           C N    G+LS     + E+ ++G  P +   N L   L    Q++ A K+F EM+  N 
Sbjct: 152 CLNSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNA 211

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           VA D +TY   I  LC+ G I  A  +   L     +  +  YN L+D LC+SGR+E A 
Sbjct: 212 VAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAF 271

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +L   +  G L P++VT+ I+I GL    +  +   +  +ME   + PN + ++ LI   
Sbjct: 272 QLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWH 331

Query: 425 IRINEPSKVIELLHKM 440
            R    S+ + L  +M
Sbjct: 332 CREGHCSEALRLFDEM 347



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 73/142 (51%), Gaps = 1/142 (0%)

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG-VLVPNVVT 381
           G +  A + F  L        I+  N L++ L   G+L++A ++F  +  G  + P+V T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y++MI  LC  G++D A  +  ++E + + P V+T+++L+    R     +  +L  +M 
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 442 EINVMPDASIVSIVVDLLAKNE 463
           E  + P      I+++ LA+ +
Sbjct: 279 EGRLRPSIVTFGILINGLARGQ 300


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 222/446 (49%), Gaps = 16/446 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P A  +  L+  LC   ++ +A  L   +   GC PDV TY  L+   C+      A+ L
Sbjct: 150 PSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMEL 209

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M          C P  VTY  I+DG+C+EG VD A+ELL  +      PN V Y +V
Sbjct: 210 IDLMRVEG------CTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTV 263

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G   A  W + + L  EM  +   P+  T +V++  LC+ G    A RLL+ M +H  
Sbjct: 264 LKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDC 323

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             +  TYN ++ G C  G V+ A  L  +M++ GCK  +F+Y+IL+ G C  +  E A  
Sbjct: 324 TANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAED 383

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L ++M      PD++  NT+   L +     +A ++F +M   G   ++ TY + I+GL 
Sbjct: 384 LMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLA 443

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + +++EL + +       +I  Y+ L + L +  +L  A+++   L    + P  V
Sbjct: 444 KTGKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAV 502

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+ ++ GLC +G+ D+A D+  +M  +  +P+  T+ +LI+G        +  ELL  +
Sbjct: 503 LYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562

Query: 441 KEINVMPDASIVSIVVDLLAKNEISL 466
              +V         +VD L KN+ SL
Sbjct: 563 SSRDV---------IVDNLIKNDASL 579



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 214/451 (47%), Gaps = 14/451 (3%)

Query: 13  RILKSCFTPDAVTFTS-LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
           R+++S   P  V   + L++ LC   R  +AA +   +   G      TY+ L +G CR 
Sbjct: 77  RVVESSLCPPDVALANRLVRDLCRRGRPADAARV---VEACGSAATAVTYSALADGYCRV 133

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                A  + +         G+   P+   Y  ++  LC  G V  A  LL  M  +   
Sbjct: 134 GRLDEARRVVD---------GMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCA 184

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+VVTY  ++   C  + + +A  L   M  +G  P  VT+NVIMD +C+ G +D A  L
Sbjct: 185 PDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYAREL 244

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           L+ +  +G  P+   YNT+L G    GR    +EL   M S  C  +  + S++I+  C+
Sbjct: 245 LNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQ 304

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
               + A+ L  +M       ++V +N +  GL E   V+ A  L   MQ +G   + +T
Sbjct: 305 EGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFT 364

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   + GLC      +A +L   +    C  DI  +N++I  LC+ G    A+E+F+ +P
Sbjct: 365 YNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMP 424

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                PN VTYS +I GL   G+M+++ +L  +M      P  I + +L       ++  
Sbjct: 425 EKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-INYHLLAECLNEEDKLV 483

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + I+++HK+++  + P A + + ++  L +N
Sbjct: 484 EAIQMVHKLQDTGISPQAVLYNTILLGLCRN 514



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 168/334 (50%), Gaps = 7/334 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V +   +L  +     TP+ V + +++KGL    R  +   L  ++    C P   T 
Sbjct: 236 GDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATL 295

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + +++ LC+      A+ L E+M+  +      C  N VTY  ++ GLC++G VD A  L
Sbjct: 296 SVVISSLCQEGLFQRAIRLLEKMSKHD------CTANIVTYNAVVSGLCEQGHVDGALYL 349

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+    KPN+ TY  +++G C A+ W +A+ L  +M      P+++TFN I+  LC+
Sbjct: 350 LSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQ 409

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G   +A  +   M + G  P++ TY+++++G   TG++  + EL   M S G    + +
Sbjct: 410 KGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI-N 468

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y +L     +  ++  A+ +  ++   GI P  V++NT+ +GL    + ++A  +   M 
Sbjct: 469 YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMV 528

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +G   D  TY   I GL   GY+ EA EL  TL
Sbjct: 529 SDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 160/341 (46%), Gaps = 6/341 (1%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+V     ++R  C      +A R+ +E    G     VT++ + D  C+ G++DEA R+
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARV-VEAC--GSAATAVTYSALADGYCRVGRLDEARRV 142

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           +D M    V P A+ YN L+   C+ G+V  A  L  +M   GC   V +Y+IL+   CK
Sbjct: 143 VDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACK 199

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            +    A+ L   M  +G  P  V +N +  G+     V+ A +L + +   G   +T  
Sbjct: 200 GRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVN 259

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T + GL   G   +  EL   +    C       + +I  LC+ G  + A+ L   + 
Sbjct: 260 YNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMS 319

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                 N+VTY+ ++ GLC  G +D A  L  +M+ +   PN+ T+++L++G        
Sbjct: 320 KHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWE 379

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
              +L+ KM + + +PD    + ++  L +  +++ ++  F
Sbjct: 380 DAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVF 420



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 143/277 (51%), Gaps = 7/277 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G       +L ++ K   T + VT+ +++ GLC +  +  A  L + ++  GC+P++FTY
Sbjct: 306 GLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTY 365

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV GLC       A +L  +M+  +      C P+ +T+ TII  LC++G   +A E+
Sbjct: 366 NILVKGLCNAERWEDAEDLMAKMSQTD------CLPDILTFNTIIGFLCQKGLTMQAVEV 419

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM +K   PN VTY+SVI G        ++  L  EM  +G  P +  ++++ + L +
Sbjct: 420 FKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI-NYHLLAECLNE 478

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+ EA +++  +   G+ P A  YNT+L G C  G+ + A ++  +M S GC     +
Sbjct: 479 EDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDEST 538

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           YSILI G      ++ A  L S + S+ +  D +I N
Sbjct: 539 YSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKN 575


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 217/406 (53%), Gaps = 6/406 (1%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           LKS    DA +F  +IKG C     ++   L   L  FG  P+V  YTTL++G C+  + 
Sbjct: 150 LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNV 209

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
           ++A NLF +M       G+V  PN  TY+ +++G  K+G   +  ++   MK   I PN 
Sbjct: 210 MLAKNLFCKM----NRLGLV--PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
             Y  +I  +C     ++A ++F EM ++G+   V+T+N+++  LC+  K  EA +L+  
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           + + G+ P+  TYN L++GFC   +++ A  LF  ++S G   T+ +Y+ LI GY K + 
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           + GAL L  EM  + I P  V +  L      ++  E+A ++   M+++G+  D +TY  
Sbjct: 384 LAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSV 443

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            + GLC +G + EA +LF +L  +  + +   YN++I G CK G    AL L   +    
Sbjct: 444 LLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSG 503

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +VPNV ++   IG LC D +  +A  L   M  + + P+V  + M+
Sbjct: 504 MVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 219/445 (49%), Gaps = 7/445 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  ++     P + TF +L+  L   +   +A  +F +L+      D +++  ++ G C 
Sbjct: 112 LHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKS-KVVLDAYSFGIMIKGCCE 170

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
             + +    L   +     EFG+   PN V YTT+IDG CK+G V  AK L  +M    +
Sbjct: 171 AGYFVKGFRLLAMLE----EFGL--SPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGL 224

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PN  TY+ ++ GF       E  +++  M   G+ PN   +N ++ E C +G +D+A +
Sbjct: 225 VPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFK 284

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +   M + G+     TYN L+ G C   +   A +L   +  +G    + +Y+ILING+C
Sbjct: 285 VFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
             ++++ A+ L++++ S G+ P +V +NTL  G  ++  +  A  L  EM+   +A    
Sbjct: 345 DVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKV 404

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY   ID   +  +  +A E+   +       D+  Y+ L+ GLC  G ++ A +LF+SL
Sbjct: 405 TYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSL 464

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               L PN V Y+ MI G C +G   +A  L  +M ++ +VPNV +F   I    R  + 
Sbjct: 465 GEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKW 524

Query: 431 SKVIELLHKMKEINVMPDASIVSIV 455
            +   LL +M    + P  S+  +V
Sbjct: 525 KEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 235/466 (50%), Gaps = 14/466 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLC---AESRIMEAAALFTKLRVF-GCEPD 57
           GR+    ++  ++ ++ FTP + T+T L   +      S   + A  F    +  G  P 
Sbjct: 67  GRIPSSLML--QLTQAHFTPCS-TYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPL 123

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
             T+  L+  L R+++   A  +F E+ +      VV +    ++  +I G C+ G+  K
Sbjct: 124 SNTFNNLLCLLIRSNYFDKAWWIFNELKSK-----VVLD--AYSFGIMIKGCCEAGYFVK 176

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
              LL  +++  + PNVV YT++I G C   +   AK LF +M   G+ PN  T++V+M+
Sbjct: 177 GFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMN 236

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
              K G   E  ++ + M + G+ P+A+ YN L+  +C  G V+ A ++F  M   G   
Sbjct: 237 GFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIAC 296

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            V +Y+ILI G C+ K+   A+ L  ++   G+ P++V +N L  G  ++ +++ A +LF
Sbjct: 297 GVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLF 356

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           ++++ +G++    TY T I G  K   +  A++L   +           Y  LID   + 
Sbjct: 357 NQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARL 416

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
              E A E+   +    LVP+V TYS+++ GLC  G M +A  LF  + E  + PN + +
Sbjct: 417 NHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 476

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + +I G+ +     + + LL++M +  ++P+ +     + LL ++E
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDE 522



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 150/312 (48%), Gaps = 6/312 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    GF +   + +S   P+A  +  LI   C +  + +A  +F ++R  G    V TY
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTY 301

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLCR      A+ L  ++        V   PN VTY  +I+G C    +D A  L
Sbjct: 302 NILIGGLCRGKKFGEAVKLVHKVNK------VGLSPNIVTYNILINGFCDVRKMDSAVRL 355

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             Q+K   + P +VTY ++I G+   ++   A  L  EM ++ + P+ VT+ +++D   +
Sbjct: 356 FNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFAR 415

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
               ++A  +  LM + G+ PD +TY+ LL G C+ G +  A +LF S+  M  +     
Sbjct: 416 LNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVI 475

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+GYCK      AL L +EM+  G+ P+V    +    L    + + A  L  +M 
Sbjct: 476 YNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMI 535

Query: 302 RNGVAADTWTYR 313
            +G+      Y+
Sbjct: 536 NSGLKPSVSLYK 547


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 236/444 (53%), Gaps = 5/444 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           TF  +I  L  E R++EA ++  +    G  P+V T+  +++G  +     +AL L  +M
Sbjct: 165 TFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKM 224

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
              +G      +P++VTY + ++G CK G +  A+E   +M  K I+PNV TY +++ G+
Sbjct: 225 EVMSG---CSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGY 281

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
                   A RL  E++++G+ PN V +N I+  L   G M+ AS LL  MI   + PD 
Sbjct: 282 TRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQ 341

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
           FTY+ +++G C  G +N A +    +  M      FS++++IN  C++  + GA  L + 
Sbjct: 342 FTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLAN 401

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  +G+ PDVV   TL     +  +VE A +++++M + G   +   Y + I+G  K G 
Sbjct: 402 MYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGS 461

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
              A+ L  TLR +   FD+  YN+LI G C  G+++ A  LF  +    ++ + VTY+ 
Sbjct: 462 FDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNT 520

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  LC  G + +A++L   M    ++P+ +T+ +LI  F +   P +VIEL   M    
Sbjct: 521 LINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKG 580

Query: 445 VMPD-ASIVSIVVDLLAKNEISLN 467
           V+PD  +  ++V+ LL +  +  +
Sbjct: 581 VVPDRQTYQTMVIPLLQEESVEFD 604



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 222/423 (52%), Gaps = 10/423 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GC--EPDV 58
           GR+     V+ R LK+   P+ VTF  +I G      +  A  L  K+ V  GC  +PD 
Sbjct: 177 GRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDS 236

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            TY + VNG C+  +  VA    +EM       G   EPN  TY T++DG  + G ++ A
Sbjct: 237 VTYNSFVNGFCKIGNLAVAEEFKKEM------LGKEIEPNVRTYATLVDGYTRVGSLENA 290

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             L  ++ +K + PN V Y S+I       D   A  L  +M+D+ + P+  T++++++ 
Sbjct: 291 FRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEG 350

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LC+NG ++EA + L ++++  +  DAF++N +++  C +  +  AK+L  +M   G    
Sbjct: 351 LCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPD 410

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V ++  LI+ +CK+ ++E A+ +Y +M+  G KP+++I+N++  G  +    + A  L D
Sbjct: 411 VVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLID 470

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            ++R G+  D  TY T I G C  G I +A  LF  +R          YN+LI+ LCK+G
Sbjct: 471 TLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAG 529

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            +  A EL + +    L+P+ VTY+I+I         ++  +L   M    VVP+  T+ 
Sbjct: 530 HVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQ 589

Query: 419 MLI 421
            ++
Sbjct: 590 TMV 592



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 183/390 (46%), Gaps = 38/390 (9%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           +C+ +   +  ++    + G  + A E++ +++       V  + + +       D N  
Sbjct: 88  ICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRF 147

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            +++ EM+  G   NV TFN+I+  L K G++ EA  ++   ++ G+ P+  T+N ++DG
Sbjct: 148 WKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDG 207

Query: 214 FCLTGRVNHAKELFVSMESM-GC--KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
               G ++ A +L   ME M GC  K    +Y+  +NG+CK   +  A     EML K I
Sbjct: 208 AIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEI 267

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG-------------------------- 304
           +P+V  + TL  G   +  +E AF+L DE+   G                          
Sbjct: 268 EPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASL 327

Query: 305 ---------VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
                    +  D +TY   I+GLC+NGY+ EA +    +  +    D  ++N +I+ LC
Sbjct: 328 LLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLC 387

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +S  L  A +L  ++    LVP+VVT+  +I   C DG+++ A  ++  M +    PN++
Sbjct: 388 RSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLL 447

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINV 445
            ++ +I GF +       I L+  ++ + +
Sbjct: 448 IYNSVINGFAKEGSFDPAILLIDTLRRMGL 477



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 157/316 (49%), Gaps = 7/316 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G + + F +   +++    P++V + S+I  L  E  +  A+ L + +      PD FT
Sbjct: 284 VGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFT 343

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ ++ GLCR  +   A    + +     E  +V   +  ++  +I+ LC+   +  AK+
Sbjct: 344 YSIVIEGLCRNGYLNEAFKFLQMIL----EMSLV--RDAFSHNVVINYLCRSNNLAGAKQ 397

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M  + + P+VVT+ ++I   C       A +++ +M+  G +PN++ +N +++   
Sbjct: 398 LLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFA 457

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G  D A  L+D + + G+  D  TYNTL+ G+C  G+++ A  LF  M + G   +  
Sbjct: 458 KEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHV 516

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LIN  CK   +  A  L   M+ +G+ PD V +  L     +    E   +L D M
Sbjct: 517 TYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYM 576

Query: 301 QRNGVAADTWTYRTFI 316
              GV  D  TY+T +
Sbjct: 577 VLKGVVPDRQTYQTMV 592



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 6/115 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F +   +  S      VT+ +LI  LC    +++A  L   + + G  PD  TY
Sbjct: 494 GKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTY 553

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           T L+    +       + L + M       GVV  P+  TY T++  L +E  V+
Sbjct: 554 TILITSFSKKCSPEEVIELHDYMVLK----GVV--PDRQTYQTMVIPLLQEESVE 602


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 230/432 (53%), Gaps = 16/432 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   GF    R     +   A++   L+  L  E+R  +   ++ ++     +P+VFT+ 
Sbjct: 168 RFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFN 227

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK---EGFVDKAK 119
            ++N LC+T     A ++ E+M      +G  C PN V+Y T+IDG CK    G + KA 
Sbjct: 228 VVINALCKTGKMNKARDVMEDMK----VYG--CSPNVVSYNTLIDGYCKLGGNGKMYKAD 281

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +L +M + ++ PN+ T+  +I GF    +   + ++F EM+DQ V+PNV+++N +++ L
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C  GK+ EA  + D M+  GV+P+  TYN L++GFC    +  A ++F S++  G   T 
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y++LI+ YCK  +I+   +L  EM  +GI PDV  +N L  GL     +E A KLFD+
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           +   G+  D  T+   ++G C+ G   +A  L   +  +  +     YN ++ G CK G 
Sbjct: 462 LTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520

Query: 360 LEIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF- 417
           L+ A  +   +     L  NV +Y++++ G    G+++ A  L  +M E  +VPN IT+ 
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580

Query: 418 ----DMLIRGFI 425
               +M+ +GF+
Sbjct: 581 IVKEEMVDQGFV 592



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 170/322 (52%), Gaps = 4/322 (1%)

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            L KE      + +  +M  + I+PNV T+  VI   C     N+A+ +  +M   G  P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256

Query: 168 NVVTFNVIMDELCK---NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           NVV++N ++D  CK   NGKM +A  +L  M+++ V P+  T+N L+DGF     +  + 
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           ++F  M     K  V SY+ LING C   +I  A+S+  +M+S G++P+++ +N L  G 
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +   ++ A  +F  ++  G    T  Y   ID  CK G I +   L   +       D+
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN LI GLC++G +E A +LF  L    L P++VT+ I++ G C  G+  KA  L  +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495

Query: 405 MEENAVVPNVITFDMLIRGFIR 426
           M +  + P  +T++++++G+ +
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCK 517



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 167/325 (51%), Gaps = 8/325 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     VL  ++++  +P+  TF  LI G   +  +  +  +F ++     +P+V +Y
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC       A+++ ++M +     GV  +PN +TY  +I+G CK   + +A ++
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSA----GV--QPNLITYNALINGFCKNDMLKEALDM 388

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +K +   P    Y  +I  +C     ++   L  EM  +G+ P+V T+N ++  LC+
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG ++ A +L D +   G+ PD  T++ L++G+C  G    A  L   M  MG K    +
Sbjct: 449 NGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507

Query: 242 YSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           Y+I++ GYCK   ++ A ++ ++M   + ++ +V  +N L  G  +  ++E A  L +EM
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYI 325
              G+  +  TY    + +   G++
Sbjct: 568 LEKGLVPNRITYEIVKEEMVDQGFV 592



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 167/331 (50%), Gaps = 39/331 (11%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G + + ++   +M  L K  +  +   +   MI+  ++P+ FT+N +++  C TG++N A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCK---NKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           +++   M+  GC   V SY+ LI+GYCK   N ++  A ++  EM+   + P++   N L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G ++   +  + K+F EM    V  +  +Y + I+GLC  G I EA+ +   +     
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLP------------------CGV-------- 374
           + ++  YN+LI+G CK+  L+ AL++F S+                   C +        
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422

Query: 375 ---------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
                    +VP+V TY+ +I GLC +G ++ A+ LF D   +  +P+++TF +L+ G+ 
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTSKGLPDLVTFHILMEGYC 481

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           R  E  K   LL +M ++ + P     +IV+
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 131/277 (47%), Gaps = 24/277 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    +  +++ +   P+ +T+ +LI G C    + EA  +F  ++  G  P    Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++  C+         L EEM       G+V  P+  TY  +I GLC+ G ++ AK+L
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEME----REGIV--PDVGTYNCLIAGLCRNGNIEAAKKL 458

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             Q+  K + P++VT+  ++ G+C   +  +A  L  EM   G++P  +T+N++M   CK
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517

Query: 182 NGKMDEASRLLDLM-IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            G +  A+ +   M  +  +R +  +YN LL G+   G++  A  L   M   G      
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRI 577

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           +Y I+       KE         EM+ +G  PD+  H
Sbjct: 578 TYEIV-------KE---------EMVDQGFVPDIEGH 598



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 132/268 (49%), Gaps = 3/268 (1%)

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +G +  A +   L+       R    + ++  M     +  VF+++++IN  CK  ++  
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK---LFDEMQRNGVAADTWTYRT 314
           A  +  +M   G  P+VV +NTL  G  ++    + +K   +  EM  N V+ +  T+  
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            IDG  K+  +  ++++F  +     + ++ +YNSLI+GLC  G++  A+ +   +    
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + PN++TY+ +I G C +  + +A D+F  ++    VP    ++MLI  + ++ +     
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
            L  +M+   ++PD    + ++  L +N
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRN 449



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 132/278 (47%), Gaps = 6/278 (2%)

Query: 209 TLLDGFCLTGRVNHAKELF--VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           + LDGF   G  +    +F  +SM    C +++ +  +L+  Y  N   E     +    
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSG 180

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G K   +    L + L + ++      ++ EM R  +  + +T+   I+ LCK G + 
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCK---SGRLEIALELFRSLPCGVLVPNVVTYS 383
           +A ++   +++  C  ++ +YN+LIDG CK   +G++  A  + + +    + PN+ T++
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           I+I G   D  +  +  +F +M +  V PNVI+++ LI G     + S+ I +  KM   
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360

Query: 444 NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
            V P+    + +++   KN++   +L  F   + Q  V
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 97/184 (52%), Gaps = 8/184 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++  GF +   + +    PD  T+  LI GLC    I  A  LF +L   G  PD+ T
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVT 472

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  L+ G CR   +  A  L +EM+    + G+  +P  +TY  ++ G CKEG +  A  
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMS----KMGL--KPRHLTYNIVMKGYCKEGNLKAATN 526

Query: 121 LLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +  QM K++ ++ NV +Y  +++G+       +A  L  EM+++G+ PN +T+ ++ +E+
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEM 586

Query: 180 CKNG 183
              G
Sbjct: 587 VDQG 590



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 46/254 (18%)

Query: 261 LYSEMLSKGIKPDVVI-HNTLFVGLFEIH-QVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+ +++S  + PD+ + + +  V   +I   +E  FKL   +     A      R+F+DG
Sbjct: 70  LFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLAN---AKRYSKIRSFLDG 126

Query: 319 LCKNGYIVEAVELFHTLRILK--CEFDIRAYNSLIDGLCKSGRLEIALELFR-------- 368
             +NG   +   +FH + +    C   I A + L+     + R E+  E F+        
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSGYYGYK 185

Query: 369 --SLPCGVLV-------------------------PNVVTYSIMIGGLCNDGQMDKARDL 401
             +L C  L+                         PNV T++++I  LC  G+M+KARD+
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE---LLHKMKEINVMPDASIVSIVVDL 458
             DM+     PNV++++ LI G+ ++    K+ +   +L +M E +V P+ +  +I++D 
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305

Query: 459 LAKNEISLNSLPSF 472
             K++    S+  F
Sbjct: 306 FWKDDNLPGSMKVF 319


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 237/447 (53%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++   VV  R+L    +P+ VT+T LIKGLC + RI EA  ++ ++   G EP + TY
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++G C+  +      L+E+M        +   P+ V Y  ++DGL K+G +  A   
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIK------MGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            ++M  ++I+ NVV + S+I G+C    ++EA ++F  M   G++P+V TF  +M     
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+++EA  L   M + G+ PDA  Y TL+D FC   +     +LF  M+       +  
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            +++I+   K   IE A   ++ ++   ++PD+V +NT+  G   + +++ A ++F+ ++
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
                 +T T    I  LCKN  +  A+ +F  +     + +   Y  L+D   KS  +E
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            + +LF  +    + P++V+YSI+I GLC  G++D+A ++F    +  ++P+V+ + +LI
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
           RG+ ++    +   L   M    V PD
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVKPD 810



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 230/481 (47%), Gaps = 29/481 (6%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +L     P+ VTF +LI G C    +  A  LF  +   G EPD+  Y+TL++G  
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332

Query: 70  RTSHTIVALNLFEEMANGNGEFGVV--------------------------CE---PNTV 100
           +     +   LF +  +   +  VV                          C+   PN V
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TYT +I GLC++G + +A  +  Q+  + ++P++VTY+S+I GFC   +      L+ +M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +  G  P+VV + V++D L K G M  A R    M+   +R +   +N+L+DG+C   R 
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A ++F  M   G K  V +++ ++        +E AL L+  M   G++PD + + TL
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
                +  +     +LFD MQRN ++AD       I  L K   I +A + F+ L   K 
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           E DI  YN++I G C   RL+ A  +F  L      PN VT +I+I  LC +  MD A  
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           +F  M E    PN +T+  L+  F +  +     +L  +M+E  + P     SI++D L 
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752

Query: 461 K 461
           K
Sbjct: 753 K 753


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  227 bits (579), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 240/459 (52%), Gaps = 8/459 (1%)

Query: 1   MGRVSHGFVVLGRI-LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +G++     +L R+  K C  PD V++T++I G C    + +   L  ++++ G +P+++
Sbjct: 123 LGKIREAHHLLMRMEFKGCI-PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLY 181

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY++++  LC++   +    +  EM    G F     P+ V YTT+IDG CK G    A 
Sbjct: 182 TYSSIILLLCKSGKVVEGEKVLREMMK-RGVF-----PDHVIYTTLIDGFCKLGNTQAAY 235

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L  +M+ + I P+ + ++++I G   +    EA +LF EM+ +G +P+ VT+  ++D  
Sbjct: 236 KLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGY 295

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G+M +A  L + M+Q G+ P+  TY  L DG C +G ++ A EL   M   G +  +
Sbjct: 296 CKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNI 355

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ ++NG CK   I  A+ L  EM   G+ PD + + TL    ++  ++ +A +L  E
Sbjct: 356 STYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLRE 415

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G+     T+   ++GLC +G + +   L   +       +   YNS++   C    
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNN 475

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           + I+ E++R +    +VP+  TY+I+I G C    M +A  L  +M E        +++ 
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNA 535

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           LI+GF +  +  +  +L  +M+   ++  A I ++ VD+
Sbjct: 536 LIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDM 574



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 214/372 (57%), Gaps = 1/372 (0%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           NT +Y  +++ L + G + +A  LL++M+ K   P+VV+YT++I G+C+  +  +  +L 
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM  +G++PN+ T++ I+  LCK+GK+ E  ++L  M++ GV PD   Y TL+DGFC  
Sbjct: 169 KEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKL 228

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G    A +LF  ME+        ++S LI G   + ++  A  L++EM+ KG +PD V +
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             L  G  ++ ++++AF L ++M + G+  +  TY    DGLCK+G +  A EL H +  
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              + +I  YN++++GLCK+G +  A++L   +    L P+ +TY+ ++      G+M K
Sbjct: 349 KGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVK 408

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV-SIVV 456
           AR+L  +M +  + P V+TF++L+ G     +      LL  M E  +MP+A+   SI+ 
Sbjct: 409 ARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMK 468

Query: 457 DLLAKNEISLNS 468
               +N + +++
Sbjct: 469 QYCIRNNMRIST 480



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/412 (31%), Positives = 221/412 (53%), Gaps = 6/412 (1%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
           +F++    G   +  +Y  L+N L R      A +L   M     EF   C P+ V+YTT
Sbjct: 97  VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRM-----EFKG-CIPDVVSYTT 150

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           IIDG C  G + K  +L+ +M+ K +KPN+ TY+S+I   C +    E +++  EMM +G
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG 210

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V P+ V +  ++D  CK G    A +L   M    + PD+  ++ L+ G   +G+V  A 
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEAD 270

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +LF  M   G +    +Y+ LI+GYCK  E++ A  L+++M+  G+ P+VV +  L  GL
Sbjct: 271 KLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGL 330

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +  +++ A +L  EM R G+  +  TY T ++GLCK G I++AV+L   ++      D 
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y +L+D   K+G +  A EL R +    L P VVT+++++ GLC  G+++    L   
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           M E  ++PN  T++ +++ +   N      E+   M    V+PD++  +I++
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILI 502



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 186/330 (56%), Gaps = 6/330 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +   ++K  F PD VT+T+LI G C    + +A  L  ++   G  P+V TY
Sbjct: 264 GKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTY 323

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L +GLC++     A  L  EM     +       N  TY TI++GLCK G + +A +L
Sbjct: 324 TALADGLCKSGELDTANELLHEMCRKGLQL------NISTYNTIVNGLCKAGNILQAVKL 377

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +MK+  + P+ +TYT+++  +    +  +A+ L  EM+D+G+QP VVTFNV+M+ LC 
Sbjct: 378 MEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCM 437

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +GK+++  RLL  M++ G+ P+A TYN+++  +C+   +  + E++  M + G      +
Sbjct: 438 SGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNT 497

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI G+CK + ++ A  L+ EM+ K        +N L  G F+  ++  A +LF+EM+
Sbjct: 498 YNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMR 557

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           R G+ A    Y  F+D   + G +   +EL
Sbjct: 558 REGLVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V  G  VL  ++K    PD V +T+LI G C       A  LF+++      PD   +
Sbjct: 194 GKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAF 253

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+ GL  +   + A  LF EM           EP+ VTYT +IDG CK G + KA  L
Sbjct: 254 SALICGLSGSGKVVEADKLFNEMIKKG------FEPDEVTYTALIDGYCKLGEMKKAFFL 307

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM    + PNVVTYT++  G C + + + A  L  EM  +G+Q N+ T+N I++ LCK
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A +L++ M + G+ PD  TY TL+D +  TG +  A+EL   M   G + TV +
Sbjct: 368 AGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVT 427

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++L+NG C + ++E    L   ML KGI P+   +N++       + +  + +++  M 
Sbjct: 428 FNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMC 487

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  D+ TY   I G CK   + EA  L   +   +      +YN+LI G  K  +L 
Sbjct: 488 AQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLL 547

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            A +LF  +    LV +   Y++ +     +G M+   +L
Sbjct: 548 EARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 164/307 (53%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           ++F E    GV  N  ++N++M+ L + GK+ EA  LL  M   G  PD  +Y T++DG+
Sbjct: 96  KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G +    +L   M+  G K  +++YS +I   CK+ ++     +  EM+ +G+ PD 
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           VI+ TL  G  ++   + A+KLF EM+   +  D+  +   I GL  +G +VEA +LF+ 
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     E D   Y +LIDG CK G ++ A  L   +    L PNVVTY+ +  GLC  G+
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D A +L  +M    +  N+ T++ ++ G  +     + ++L+ +MKE  + PD    + 
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395

Query: 455 VVDLLAK 461
           ++D   K
Sbjct: 396 LMDAYYK 402



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 162/300 (54%), Gaps = 8/300 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  ++++   TP+ VT+T+L  GLC    +  A  L  ++   G + ++ T
Sbjct: 298 LGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIST 357

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+VNGLC+  + + A+ L EEM     E G+   P+T+TYTT++D   K G + KA+E
Sbjct: 358 YNTIVNGLCKAGNILQAVKLMEEMK----EAGL--HPDTITYTTLMDAYYKTGEMVKARE 411

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M D+ ++P VVT+  ++ G C +    + +RL   M+++G+ PN  T+N IM + C
Sbjct: 412 LLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYC 471

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
               M  ++ +   M   GV PD+ TYN L+ G C    +  A  L   M       T  
Sbjct: 472 IRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTAS 531

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL-FEIHQVERAFKLFDE 299
           SY+ LI G+ K K++  A  L+ EM  +G+     I+N LFV + +E   +E   +L DE
Sbjct: 532 SYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYN-LFVDMNYEEGNMETTLELCDE 590



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 36/304 (11%)

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           +RL     D G  P+V  F+V    L + G ++EA +  D ++ +GV   A + N  L  
Sbjct: 26  ERLIYTYKDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLT- 82

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            CL+ + +        M  M                         L ++SE    G+  +
Sbjct: 83  -CLSSKRD--------MLGM------------------------VLKVFSEFPQLGVCWN 109

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +N L   LF + ++  A  L   M+  G   D  +Y T IDG C  G + + V+L  
Sbjct: 110 TESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVK 169

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +++   + ++  Y+S+I  LCKSG++    ++ R +    + P+ V Y+ +I G C  G
Sbjct: 170 EMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLG 229

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
               A  LF +ME   +VP+ I F  LI G     +  +  +L ++M +    PD    +
Sbjct: 230 NTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYT 289

Query: 454 IVVD 457
            ++D
Sbjct: 290 ALID 293



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 88/193 (45%), Gaps = 12/193 (6%)

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           KP++ I N+        H VER    + +       +D   +  F   L + G + EA +
Sbjct: 12  KPNLDISNSF------THFVERLIYTYKDW-----GSDPHVFDVFFQVLVEAGLLNEARK 60

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLC-KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
            F  L          + N  +  L  K   L + L++F   P   +  N  +Y+I++  L
Sbjct: 61  FFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSL 120

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
              G++ +A  L + ME    +P+V+++  +I G+  + E  KV++L+ +M+   + P+ 
Sbjct: 121 FRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNL 180

Query: 450 SIVSIVVDLLAKN 462
              S ++ LL K+
Sbjct: 181 YTYSSIILLLCKS 193


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  227 bits (579), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 242/490 (49%), Gaps = 40/490 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF-- 59
           G V+    +   +++   TP+   F+ LI+       + +A  L+T+++  G +P VF  
Sbjct: 341 GDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFIL 400

Query: 60  --------------------------------TYTTLVNGLCRTSHTIVALNLFEEMANG 87
                                           TY  ++  LC       A NL+++M   
Sbjct: 401 NFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKM--- 457

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
               G    P+ V+Y  +I G CK+G +D A E++  + +  +KPN +TYT ++ G    
Sbjct: 458 ---IGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKK 514

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
            D   A  +F +M+  G+ P   TFN I++ LCK G++ EA   L+  I+    P + TY
Sbjct: 515 GDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTY 574

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N ++DG+   G ++ A+ ++  M        V +Y+ LING+CK+ +++ AL ++ +M  
Sbjct: 575 NCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKR 634

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           KG++ D+ ++ TL  G  ++  +E A K F ++   G+  +T  Y   I        +  
Sbjct: 635 KGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEA 694

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A+ L   +   K   D++ Y SLIDGL K G+L  AL+L+  + C  +VP++  Y+++I 
Sbjct: 695 ALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLIN 754

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           GLCN GQ++ A  +  +M+ N + P V+ ++ LI G  +     +   L  +M +  ++P
Sbjct: 755 GLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVP 814

Query: 448 DASIVSIVVD 457
           D +   I+V+
Sbjct: 815 DDTTYDILVN 824



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 209/400 (52%), Gaps = 6/400 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+  ++  LC   ++ EA  L+ K+   G  P + +Y  ++ G C+       ++   E
Sbjct: 432 VTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKG----CMDDAHE 487

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           + NG  E G+  +PN +TYT +++G  K+G  + A  +  QM    I P   T+ S+I G
Sbjct: 488 VMNGIIESGL--KPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIING 545

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C     +EA+      + Q   P  +T+N I+D   K G +D A  +   M +  + P+
Sbjct: 546 LCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPN 605

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             TY +L++GFC + +++ A ++   M+  G +  +  Y+ LI G+CK +++E A   +S
Sbjct: 606 VITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFS 665

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           ++L  G+ P+ +++N +      ++ +E A  L  EM  N +  D   Y + IDGL K G
Sbjct: 666 KLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEG 725

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            +  A++L+  +       DI  YN LI+GLC  G+LE A ++ + +    + P V+ Y+
Sbjct: 726 KLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYN 785

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            +I G   +G + +A  L  +M +  +VP+  T+D+L+ G
Sbjct: 786 TLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 217/435 (49%), Gaps = 7/435 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T   L++      + +EA   F +    G + D  +Y+ ++  +CR S     L+L 
Sbjct: 221 DCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSD----LDLA 276

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            ++  G+ E G V  P+  TY  +I    + G   +A  L  +M D  +  NV   TS+I
Sbjct: 277 SKLVEGDEELGWV--PSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLI 334

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G+C   D N A RLF E+++ GV PNV  F+V+++   K G +++A+ L   M   G++
Sbjct: 335 KGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQ 394

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P  F  N LL GF     + +A  L       G   +V +Y+I++   C+  ++  A +L
Sbjct: 395 PTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNL 453

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +M+ KGI P +V +N + +G  +   ++ A ++ + +  +G+  +  TY   ++G  K
Sbjct: 454 WDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFK 513

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G    A  +F  +           +NS+I+GLCK GR+  A +   +      +P  +T
Sbjct: 514 KGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMT 573

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ +I G   +G +D A  ++ +M  + + PNVIT+  LI GF + N+    +++   MK
Sbjct: 574 YNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMK 633

Query: 442 EINVMPDASIVSIVV 456
              +  D ++ + ++
Sbjct: 634 RKGLELDITVYATLI 648



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 216/433 (49%), Gaps = 7/433 (1%)

Query: 27  TSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
           TSLIKG C    +  A  LF ++   G  P+V  ++ L+    +  +   A  L+  M  
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMK- 389

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                 +  +P       ++ G  K+  ++ A  LLL    +N   +VVTY  V+   C 
Sbjct: 390 -----CMGLQPTVFILNFLLKGFRKQNLLENAY-LLLDGAVENGIASVVTYNIVLLWLCE 443

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
               NEA  L+ +M+ +G+ P++V++N ++   CK G MD+A  +++ +I+ G++P+A T
Sbjct: 444 LGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAIT 503

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y  L++G    G   HA  +F  M + G   T ++++ +ING CK   +  A    +  +
Sbjct: 504 YTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFI 563

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +   P  + +N +  G  +   ++ A  ++ EM R+ ++ +  TY + I+G CK+  + 
Sbjct: 564 KQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMD 623

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            A+++   ++    E DI  Y +LI G CK   +E A + F  L    L PN + Y+IMI
Sbjct: 624 LALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMI 683

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
               N   M+ A +L  +M  N +  ++  +  LI G ++  + S  ++L  +M    ++
Sbjct: 684 SAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIV 743

Query: 447 PDASIVSIVVDLL 459
           PD  + +++++ L
Sbjct: 744 PDIFMYNVLINGL 756



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 12/347 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V+  I++S   P+A+T+T L++G   +     A  +F ++   G  P  +T+ +++NGLC
Sbjct: 488 VMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLC 547

Query: 70  ---RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
              R S     LN F + +           P ++TY  IIDG  KEG +D A+ +  +M 
Sbjct: 548 KVGRVSEARDKLNTFIKQS---------FIPTSMTYNCIIDGYVKEGAIDSAESVYREMC 598

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
              I PNV+TYTS+I GFC +   + A ++  +M  +G++ ++  +  ++   CK   M+
Sbjct: 599 RSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDME 658

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A +    +++ G+ P+   YN ++  +     +  A  L   M +      +  Y+ LI
Sbjct: 659 NACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLI 718

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G  K  ++  AL LYSEML +GI PD+ ++N L  GL    Q+E A K+  EM  N + 
Sbjct: 719 DGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNIT 778

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
                Y T I G  K G + EA  L   +       D   Y+ L++G
Sbjct: 779 PTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 198/436 (45%), Gaps = 7/436 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D+  F  L+      ++I EA   F  +   G  P V     L+  + R +    A  LF
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EMA     +G     +  T   ++    K G   +A+    Q   + +K +  +Y+ VI
Sbjct: 211 DEMAERR-IYG-----DCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVI 264

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +  C   D + A +L     + G  P+  T+  ++    + G   EA RL D M+   V 
Sbjct: 265 QAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVP 324

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            +     +L+ G+C+ G VN A  LF  +  +G    V  +S+LI    K   +E A  L
Sbjct: 325 VNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANEL 384

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           Y+ M   G++P V I N L  G  + + +E A+ L D    NG+A+   TY   +  LC+
Sbjct: 385 YTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIAS-VVTYNIVLLWLCE 443

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA  L+  +        + +YN +I G CK G ++ A E+   +    L PN +T
Sbjct: 444 LGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAIT 503

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+I++ G    G  + A ++F  M    +VP   TF+ +I G  ++   S+  + L+   
Sbjct: 504 YTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFI 563

Query: 442 EINVMPDASIVSIVVD 457
           + + +P +   + ++D
Sbjct: 564 KQSFIPTSMTYNCIID 579



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 6/283 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRVS     L   +K  F P ++T+  +I G   E  I  A +++ ++      P+V T
Sbjct: 549 VGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVIT 608

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT+L+NG C+++   +AL + ++M     E  +        Y T+I G CK   ++ A +
Sbjct: 609 YTSLINGFCKSNKMDLALKMHDDMKRKGLELDI------TVYATLIAGFCKMQDMENACK 662

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              ++ +  + PN + Y  +I  +    +   A  L  EM++  +  ++  +  ++D L 
Sbjct: 663 FFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLL 722

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+  A  L   M+  G+ PD F YN L++G C  G++ +A ++   M+      TV 
Sbjct: 723 KEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVL 782

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            Y+ LI G+ K   ++ A  L+ EML KG+ PD   ++ L  G
Sbjct: 783 LYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 217/392 (55%), Gaps = 6/392 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+A T+ +++  LC   ++ +A  +  +     C PDV T T L++  C+ S    A+ 
Sbjct: 168 APNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMK 227

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           LF EM  G G     C+P+ VTY  +I G CKEG +D+A   L ++     + +V+++  
Sbjct: 228 LFNEM-RGKG-----CKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNM 281

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++R  C    W +A +L   M+ +G  P+VVTFN++++ LC+ G + +A  +L++M +HG
Sbjct: 282 ILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHG 341

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P++ ++N L+ GFC    ++ A E    M S GC   + +Y+IL+   CK+ +++ A+
Sbjct: 342 HTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAV 401

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + S++ SKG  P ++ +NT+  GL ++ + E A +L +EM   G+  D  T  + + GL
Sbjct: 402 VILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGL 461

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G + EA++ FH L+    + +   YNS++ GLCK+ +  +A++    +      P  
Sbjct: 462 SREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTE 521

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            +Y+ +I G+  +G  ++A  L  ++    +V
Sbjct: 522 ASYTTLIKGITYEGLAEEASKLSNELYSRGLV 553



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 212/436 (48%), Gaps = 10/436 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V  T+LI+  C   R   A  +   L   G   D  +Y  L+N  C++     AL +
Sbjct: 102 PDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRV 161

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +  +           PN  TY  ++  LC  G + +A ++L +       P+VVT T +
Sbjct: 162 LDHTS---------VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVL 212

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      +A +LF EM  +G +P+VVT+NV++   CK G++DEA   L  +  +G 
Sbjct: 213 IDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGC 272

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + D  ++N +L   C  GR   A +L  +M   GC  +V +++ILIN  C+   +  AL+
Sbjct: 273 QSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALN 332

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +   M   G  P+    N L  G      ++RA +  + M   G   D  TY   +  LC
Sbjct: 333 VLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALC 392

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K+G + +AV +   L    C   + +YN++IDGL K G+ E+A+EL   +    L P+++
Sbjct: 393 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLI 452

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T + ++GGL  +G++ +A   F  ++   + PN   ++ ++ G  +  + S  I+ L  M
Sbjct: 453 TCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDM 512

Query: 441 KEINVMP-DASIVSIV 455
                 P +AS  +++
Sbjct: 513 VANGCKPTEASYTTLI 528



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 180/369 (48%), Gaps = 6/369 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     VL R L+S   PD VT T LI   C ES + +A  LF ++R  GC+PDV TY
Sbjct: 185 GKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTY 244

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ G C+      A+   +++ +    +G  C+ + +++  I+  LC  G    A +L
Sbjct: 245 NVLIKGFCKEGRLDEAIIFLKKLPS----YG--CQSDVISHNMILRSLCSGGRWMDAMKL 298

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  K   P+VVT+  +I   C      +A  +   M   G  PN  +FN ++   C 
Sbjct: 299 LATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCN 358

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              +D A   L++M+  G  PD  TYN LL   C  G+V+ A  +   + S GC  ++ S
Sbjct: 359 RKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLIS 418

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K  + E A+ L  EM  KG+KPD++   ++  GL    +V  A K F  ++
Sbjct: 419 YNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLK 478

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  + + Y + + GLCK      A++    +    C+    +Y +LI G+   G  E
Sbjct: 479 GFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAE 538

Query: 362 IALELFRSL 370
            A +L   L
Sbjct: 539 EASKLSNEL 547



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 197/412 (47%), Gaps = 10/412 (2%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PDV   T L+   C+   T  A  +   +     E G V + N+  Y  +I+  CK G +
Sbjct: 102 PDVVACTALIREFCKIGRTKNATRIMGILE----ESGAVIDANS--YNVLINAYCKSGEI 155

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           ++A  +L      ++ PN  TY +V+   C      +A ++    +     P+VVT  V+
Sbjct: 156 EEALRVL---DHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVL 212

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D  CK   + +A +L + M   G +PD  TYN L+ GFC  GR++ A      + S GC
Sbjct: 213 IDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGC 272

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V S+++++   C       A+ L + ML KG  P VV  N L   L +   + +A  
Sbjct: 273 QSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALN 332

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + + M ++G   ++ ++   I G C    I  A+E    +    C  DI  YN L+  LC
Sbjct: 333 VLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALC 392

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K G+++ A+ +   L      P++++Y+ +I GL   G+ + A +L  +M    + P++I
Sbjct: 393 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLI 452

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV-SIVVDLLAKNEISL 466
           T   ++ G  R  +  + I+  H +K   + P+A I  SI++ L    + SL
Sbjct: 453 TCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSL 504



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 178/385 (46%), Gaps = 32/385 (8%)

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           L + G +++    L  M +K   P+VV  T++IR FC       A R+   + + G   +
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 169 VVTFNVIMDELCKNGKMDEASR--------------------------------LLDLMI 196
             ++NV+++  CK+G+++EA R                                +LD  +
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL 198

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           Q    PD  T   L+D  C    V  A +LF  M   GCK  V +Y++LI G+CK   ++
Sbjct: 199 QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLD 258

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+    ++ S G + DV+ HN +   L    +   A KL   M R G      T+   I
Sbjct: 259 EAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILI 318

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           + LC+ G + +A+ +   +       + R++N LI G C    ++ A+E    +      
Sbjct: 319 NFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCY 378

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P++VTY+I++  LC DG++D A  +   +      P++I+++ +I G +++ +    +EL
Sbjct: 379 PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 438

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
           L +M    + PD    + VV  L++
Sbjct: 439 LEEMCYKGLKPDLITCTSVVGGLSR 463


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 227/461 (49%), Gaps = 7/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++     L  +     +PDAVT+ +L+   C +  + EA AL  +++  G  P   TY
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLV+   R      A  + E M      +G   EP+  TY  +  GLC+ G VD+A  L
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMT----AYGF--EPDLRTYNVLAVGLCQAGKVDEAFRL 335

Query: 122 LLQMKDKNIK-PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
             +M+  +   P+VVTY +++      +  ++A RL  EM D+GV+P +VT N+++  LC
Sbjct: 336 KDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLC 395

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK++EA   L+ + + G+ PD  TYNTL+D +C  G V  A  L   M   G K   F
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + + ++   CK K  E A  L      +G  PD V + T+    F+ +  E A +L+D+M
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +     TY T I GLC+   + EA++  + L       D   YN +I   CK G L
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A      +      P+VVT + ++ GLC  G++DKA  LF    E     +VIT++ L
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I+   ++ +    +     M+   + PDA   ++V+  L++
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSE 676



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 217/443 (48%), Gaps = 9/443 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L R+ +    P   T+ +L+        I +A  +   +  +G EPD+ TY
Sbjct: 257 GMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTY 316

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L  GLC+      A  L +EM     E      P+ VTY T++D   K      A  L
Sbjct: 317 NVLAVGLCQAGKVDEAFRLKDEM-----ERLSTALPDVVTYNTLVDACFKWRCSSDALRL 371

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+DK +KP +VT+  V++  C      EA     ++ ++G+ P+V+T+N ++D  CK
Sbjct: 372 LEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCK 431

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A  L+D M+  G++ D FT NT+L   C   R   A+EL  S    G      S
Sbjct: 432 AGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVS 491

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  ++  Y K    E AL L+ +M+ + + P +  +NTL  GL  + +++ A    +E+ 
Sbjct: 492 YGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELV 551

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGR 359
             G+  D  TY   I   CK G +  A   FH  ++++  F  D+   N+L++GLC  G+
Sbjct: 552 EKGLVPDETTYNIIIHAYCKEGDLENAFR-FHN-KMVENSFKPDVVTCNTLMNGLCLHGK 609

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ AL+LF S        +V+TY+ +I  +C  G +D A   F DME   + P+  T+++
Sbjct: 610 LDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNV 669

Query: 420 LIRGFIRINEPSKVIELLHKMKE 442
           ++          +   +LHK+ +
Sbjct: 670 VLSALSEAGRSEEAHNMLHKLAD 692



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 219/469 (46%), Gaps = 50/469 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAAL--FTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           P      +++  L      +  A+L  F  L      P+ +T+  LV+  C       AL
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
                M      FG+   P+ VTY T+++  C++G + +A+ LL +MK   I P   TY 
Sbjct: 229 ATLSTMQG----FGL--SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +++  F       +A ++   M   G +P++ T+NV+   LC+ GK+DEA RL D M + 
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERL 342

Query: 199 GVR-PDAFTYNTLLDGFCLTGRVNH-AKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
               PD  TYNTL+D  C   R +  A  L   M   G K T+ +++I++   CK  ++E
Sbjct: 343 STALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLE 401

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL    ++  +G+ PDV+ +NTL     +   V +AF L DEM   G+  DT+T  T +
Sbjct: 402 EALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461

Query: 317 DGLCKNGYIVEAVELFHT-----------------------------LRIL------KCE 341
             LCK     +A EL H+                             LR+       K  
Sbjct: 462 YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLI 521

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
             I  YN+LI GLC+  RL+ A++    L    LVP+  TY+I+I   C +G ++ A   
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL----LHKMKEINVM 446
              M EN+  P+V+T + L+ G     +  K ++L    + K K+++V+
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 224/498 (44%), Gaps = 78/498 (15%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVF 59
           +G +     V+  +    F PD  T+  L  GLC   ++ EA  L  ++ R+    PDV 
Sbjct: 291 LGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVV 350

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY TLV+   +   +  AL L EEM +     GV  +P  VT+  ++  LCKEG +++A 
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDK----GV--KPTLVTHNIVVKSLCKEGKLEEAL 404

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
             L ++ ++ + P+V+TY ++I  +C A +  +A  L  EM+ +G++ +  T N ++  L
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464

Query: 180 CKNGKMDEAS-----------------------------------RLLDLMIQHGVRPDA 204
           CK  + ++A                                    RL D MI+  + P  
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSI 524

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TYNTL+ G C   R+  A +    +   G      +Y+I+I+ YCK  ++E A   +++
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNK 584

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+    KPDVV  NTL  GL    ++++A KLF+     G   D  TY T I  +CK G 
Sbjct: 585 MVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGD 644

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL----------ELFRSLPCGV 374
           +  A+  F  + +   + D   YN ++  L ++GR E A           +L +S  C +
Sbjct: 645 VDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPL 704

Query: 375 LVPNVV--------------------------TYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           L P+                            TY   + GLC  GQ+ +A+ +  +M + 
Sbjct: 705 LKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQK 764

Query: 409 AVVPNVITFDMLIRGFIR 426
            +  +  T+  L+ G I+
Sbjct: 765 GMPVDSSTYITLMEGLIK 782



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 167/363 (46%), Gaps = 36/363 (9%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + PN  T+  ++   C      +A      M   G+ P+ VT+N +++  C+ G + EA 
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 263

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M + G+ P   TYNTL+  F   G +  A ++  SM + G +  + +Y++L  G 
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGL 323

Query: 250 CKNKEIE------------------------------------GALSLYSEMLSKGIKPD 273
           C+  +++                                     AL L  EM  KG+KP 
Sbjct: 324 CQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           +V HN +   L +  ++E A    +++   G+A D  TY T ID  CK G + +A  L  
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +     + D    N+++  LCK  R E A EL  S P    VP+ V+Y  ++     + 
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
             + A  L+  M E  ++P++ T++ LI+G  R+    + I+ L+++ E  ++PD +  +
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYN 563

Query: 454 IVV 456
           I++
Sbjct: 564 III 566



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 161/335 (48%), Gaps = 4/335 (1%)

Query: 118 AKELLLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRL--FIEMMDQGVQPNVVTFNV 174
           A +LL  ++ +  ++P++    +V+     +        L  F  +++  + PN  TFN+
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++   C  G + +A   L  M   G+ PDA TYNTLL+  C  G +  A+ L   M+  G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
              T  +Y+ L++ + +   I+ A  +   M + G +PD+  +N L VGL +  +V+ AF
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF 333

Query: 295 KLFDEMQRNGVA-ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
           +L DEM+R   A  D  TY T +D   K     +A+ L   +R    +  +  +N ++  
Sbjct: 334 RLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCK G+LE AL     +    L P+V+TY+ +I   C  G + KA  L  +M    +  +
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             T + ++    ++       ELLH   +   +PD
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 128/277 (46%), Gaps = 3/277 (1%)

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV--NHAKELFVSMESMGCKHTVFSYSIL 245
           A  L  L  + GVRP     N +L     +       + ++F S+  +      +++++L
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++ +C    +  AL+  S M   G+ PD V +NTL         +  A  L   M+R+G+
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
           A    TY T +    + G+I +A ++  ++     E D+R YN L  GLC++G+++ A  
Sbjct: 275 APTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFR 334

Query: 366 LFRSLP-CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           L   +      +P+VVTY+ ++           A  L  +M +  V P ++T +++++  
Sbjct: 335 LKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSL 394

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +  +  + +  L K+ E  + PD    + ++D   K
Sbjct: 395 CKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCK 431


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 198/364 (54%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C P+ +TYT +I+  C E  V +A +LL +M  +  KP+VVTY  ++ G C     +EA 
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +    M   G QPNV+T N+I+  +C  G+  +A +LL  M++ G  P   T+N L++  
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G +  A ++   M + GC     SY+ L++G+CK K+++ A+     M+S+G  PD+
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +NT+   L +  +V+ A +L +++   G +    TY T IDGL K G   +AVEL H 
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +R    + D+  Y+SLI GL + G++E A++ F  +    + PN  TY+ ++ GLC   Q
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
            D+A D    M      P  +++ +LI G        + +ELL+++    V+  +S   +
Sbjct: 312 TDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQV 371

Query: 455 VVDL 458
           VV L
Sbjct: 372 VVRL 375



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 192/362 (53%), Gaps = 8/362 (2%)

Query: 10  VLGRIL-KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           VL R L K C+ PD +T+T LI+  CAES + +A  L  ++   GC+PDV TY  LVNG+
Sbjct: 3   VLDRQLEKECY-PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C+      A+     M +    +G   +PN +T+  I+  +C  G    A++LL +M  K
Sbjct: 62  CKEGRLDEAIKFLNSMPS----YG--SQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRK 115

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
              P+VVT+  +I   C       A  +  +M   G  PN +++N ++   CK  KMD A
Sbjct: 116 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRA 175

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            + L++M+  G  PD  TYNT+L   C  G+V+ A EL   + S GC   + +Y+ +I+G
Sbjct: 176 IQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDG 235

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
             K  + + A+ L  EM  KG+KPDV+ +++L  GL    +VE A K F +++  GV  +
Sbjct: 236 LSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPN 295

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            +TY + + GLCK      A++    +    C+    +Y  LI+G+   G  + ALEL  
Sbjct: 296 AFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLN 355

Query: 369 SL 370
            L
Sbjct: 356 EL 357



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 193/350 (55%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+L +  +K   P+V+TYT +I   C      +A +L  EM  +G +P+VVT+NV+++ +
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G++DEA + L+ M  +G +P+  T+N +L   C TGR   A++L   M   GC  +V
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +++ILIN  C+   +  A+ +  +M + G  P+ + +N L  G  +  +++RA +  + 
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M   G   D  TY T +  LCK+G +  AVEL + L    C   +  YN++IDGL K G+
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            + A+EL   +    L P+V+TYS +I GL  +G++++A   F D+E   V PN  T++ 
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           ++ G  +  +  + I+ L  M      P     +I+++ +A   ++  +L
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEAL 351



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 158/308 (51%), Gaps = 6/308 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+      L  +      P+ +T   +++ +C+  R M+A  L T++   GC P V T+
Sbjct: 65  GRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTF 124

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N LCR      A+++ E+M          C PN+++Y  ++ G CKE  +D+A + 
Sbjct: 125 NILINFLCRKGLLGRAIDILEKMPTHG------CTPNSLSYNPLLHGFCKEKKMDRAIQY 178

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  +   P++VTY +++   C     + A  L  ++  +G  P ++T+N ++D L K
Sbjct: 179 LEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSK 238

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK D+A  LL  M   G++PD  TY++L+ G    G+V  A + F  +E  G K   F+
Sbjct: 239 VGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFT 298

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++ G CK ++ + A+   + M+SKG KP  V +  L  G+      + A +L +E+ 
Sbjct: 299 YNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELC 358

Query: 302 RNGVAADT 309
             GV   +
Sbjct: 359 SRGVVKKS 366



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 98/204 (48%)

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           + +    L K   PDV+ +  L         V +A KL DEM   G   D  TY   ++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           +CK G + EA++  +++     + ++  +N ++  +C +GR   A +L   +      P+
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVT++I+I  LC  G + +A D+   M  +   PN ++++ L+ GF +  +  + I+ L 
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 439 KMKEINVMPDASIVSIVVDLLAKN 462
            M      PD    + ++  L K+
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKD 204



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      +L  +      PD +T++SLI GL  E ++ EA   F  +  FG +P+ FT
Sbjct: 239 VGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFT 298

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +++ GLC+   T  A++    M +        C+P  V+YT +I+G+  EG   +A E
Sbjct: 299 YNSIMFGLCKAQQTDRAIDFLAYMISKG------CKPTEVSYTILIEGIANEGLAKEALE 352

Query: 121 LLLQMKDKNIKPNVVTYTSVIR 142
           LL ++  + +         V+R
Sbjct: 353 LLNELCSRGVVKKSSAEQVVVR 374


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 237/468 (50%), Gaps = 37/468 (7%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A+TF  +IK +C    + +A  +F ++ +  C PD +TY+TL++GLC+      A++L
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM    G F     PN V +  +I  LCK+G + +A +L+  M  K   PN VTY ++
Sbjct: 228 LDEM-QVEGTF-----PNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNAL 281

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C      +A  L  +M+     PN VTF  +++     G+  + +R+L  +   G 
Sbjct: 282 VHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGH 341

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           R + + Y++L+ G C  G+ N A EL+  M   GC      YS LI+G C+  +++ A  
Sbjct: 342 RGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARG 401

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
             SEM +KG  P+   +++L  G FE     +A  ++ EM  N    +   Y   I+GLC
Sbjct: 402 FLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLC 461

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG--VLVPN 378
           K+G  +EA+ ++  +     + D+ AY+S+I G C +  +E  L+LF  + C   V+ P+
Sbjct: 462 KDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPD 521

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR-INEP------- 430
           V+TY+I++   C    + +A D+   M +    P+ IT D+ ++     +N P       
Sbjct: 522 VITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFL 581

Query: 431 ----------------SKVIE-LLHKMKEINVMPDASIVSIVVDLLAK 461
                           SK+IE ++HK     ++P AS  ++VV  + K
Sbjct: 582 DELVVRLVKRQRTIGASKIIEVMMHKF----LLPKASTWAMVVQQVCK 625



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 226/443 (51%), Gaps = 11/443 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           +F S++  +  E     A   +  +   +     P+  T+  ++  +CR      A+ +F
Sbjct: 134 SFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVF 193

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            E+   N      C P+  TY+T++ GLCKE  +D+A  LL +M+ +   PN+V +  +I
Sbjct: 194 REIPLRN------CAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLI 247

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C   D   A +L   M  +G  PN VT+N ++  LC  GK+++A  LL+ M+ +   
Sbjct: 248 SALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCV 307

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  T+ TL++GF + GR +    + VS+E+ G +   + YS LI+G CK  +   A+ L
Sbjct: 308 PNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMEL 367

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EM+ KG  P+ ++++ L  GL    +++ A     EM+  G   +++TY + + G  +
Sbjct: 368 WKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFE 427

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G   +A+ ++  +    C  +   Y+ LI+GLCK G+   AL +++ +    +  +VV 
Sbjct: 428 AGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVA 487

Query: 382 YSIMIGGLCNDGQMDKARDLFLDM--EENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           YS MI G CN   +++   LF  M  +   V P+VIT+++L+  F       + I++L+ 
Sbjct: 488 YSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNI 547

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M +    PD     I +  L +N
Sbjct: 548 MLDQGCDPDFITCDIFLKTLREN 570



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 211/442 (47%), Gaps = 65/442 (14%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           L++C  PD  T+++L+ GLC E RI EA +L  +++V G  P++  +  L++ LC+    
Sbjct: 198 LRNC-APDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDL 256

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A  L + M      F   C PN VTY  ++ GLC +G ++KA  LL QM      PN 
Sbjct: 257 GRAAKLVDNM------FLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPND 310

Query: 135 VT-----------------------------------YTSVIRGFCYAKDWNEAKRLFIE 159
           VT                                   Y+S+I G C    +N+A  L+ E
Sbjct: 311 VTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKE 370

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+ +G  PN + ++ ++D LC+ GK+DEA   L  M   G  P++FTY++L+ G+   G 
Sbjct: 371 MVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGD 430

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
            + A  ++  M +  C H    YSILING CK+ +   AL ++ +MLS+GIK DVV +++
Sbjct: 431 SHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSS 490

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNG--VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           +  G    + VE+  KLF++M   G  V  D  TY   ++  C    I  A+++ + +  
Sbjct: 491 MIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLD 550

Query: 338 LKCEFDI--------------------RAY-NSLIDGLCKSGRLEIALELFRSLPCGVLV 376
             C+ D                     R + + L+  L K  R   A ++   +    L+
Sbjct: 551 QGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLL 610

Query: 377 PNVVTYSIMIGGLCNDGQMDKA 398
           P   T+++++  +C    + KA
Sbjct: 611 PKASTWAMVVQQVCKPKNVRKA 632



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 22/210 (10%)

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEI-HQVERAFKLFDEMQRNGVAADTWTYRTF 315
           G LS YS + S     D       F  L E+ HQ++R  ++F  +++N        +   
Sbjct: 60  GDLSFYSLIESHASSLD-------FRSLEEVLHQMKRERRVF--LEKN--------FIVM 102

Query: 316 IDGLCKNGYIVEAVELFHTLR-ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
                K     +AV+LFH +    +C+  ++++NS+++ + + G    ALE +  +    
Sbjct: 103 FKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASK 162

Query: 375 ---LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + PN +T++++I  +C  G +DKA ++F ++      P+  T+  L+ G  +     
Sbjct: 163 SLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERID 222

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + + LL +M+     P+    ++++  L K
Sbjct: 223 EAVSLLDEMQVEGTFPNLVAFNVLISALCK 252


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 230/465 (49%), Gaps = 20/465 (4%)

Query: 2   GRVSHGFVVLGRILKS-CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G +    ++L  +L S    P+   F SLI  L   +R+ +AA     +R  G  PDV T
Sbjct: 73  GDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVT 132

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T ++ G C+      A  +F+EM   N      C+P+   Y  +IDG CKE  +D+A E
Sbjct: 133 FTVMIRGFCKNRMMERAWEIFQEMIKSN-----RCQPDCFLYGVLIDGYCKELRMDRALE 187

Query: 121 LLLQMK-DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE-MMDQGVQPNVVTFNVIMDE 178
           LL +M+ ++ I+P+VV Y S++ G C +  + EA +   E M+ QG  P VVT+  ++  
Sbjct: 188 LLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRG 247

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            CK  KM  A R+ + M++  ++P   +Y+ ++DG    GRV  A  +   ME++GC+  
Sbjct: 248 ACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELN 307

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V  Y+ LI+G CK+  ++ A +LY  M   G  P+   + TL        + E A  LFD
Sbjct: 308 VVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFD 367

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            + R+    D   Y   + GLC+   + +A  LF  +R+     D  AYN L+ G  +S 
Sbjct: 368 HI-RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSE 426

Query: 359 RLEIALELFRSL----PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           R E A  +   L     C   V N++TY+ +I G C +  M     LF +M +  + P+ 
Sbjct: 427 RPEEAFRILEELGDDPGC---VANLLTYNTVIAGCCLESGM----VLFYEMRQRGIAPDF 479

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            T+  LI   +   E  +  +L  +M    + P + ++  VV  L
Sbjct: 480 ATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARL 524



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 187/380 (49%), Gaps = 12/380 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           PD   +  LI G C E R+  A  L  ++RV    +PDV  Y ++V+GLCR++  + A  
Sbjct: 164 PDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWK 223

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
             +E     G     C P  VTYT++I G CK   +  A  +   M ++ I+P +V+Y+ 
Sbjct: 224 FLDETMVLQG-----CSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSV 278

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G   A    +A R+  EM   G + NVV +  ++D LCK+G +D+A  L  +M + G
Sbjct: 279 IIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSG 338

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TY TL+D FC   R   A  LF  +    C   V  Y+ +++G C+ + ++ A 
Sbjct: 339 AFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CPLDVAMYTAVVSGLCRERRLDDAR 397

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN-GVAADTWTYRTFIDG 318
           +L+ EM   G+  D   +N L  G F   + E AF++ +E+  + G  A+  TY T I G
Sbjct: 398 ALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAG 457

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C    +V    LF+ +R      D   Y++LID L  SG +  A +L   +    L P 
Sbjct: 458 CCLESGMV----LFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPP 513

Query: 379 VVTYSIMIGGLCNDGQMDKA 398
                 ++  LC   + D A
Sbjct: 514 SGVLGRVVARLCWSRRGDLA 533



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 168/328 (51%), Gaps = 5/328 (1%)

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQP-NVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           VI   C + D   A  +   M+  G  P N   F  ++D L K+ ++ +A+R L+LM   
Sbjct: 65  VIDRACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDA 124

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEG 257
           G+ PD  T+  ++ GFC    +  A E+F  M +S  C+   F Y +LI+GYCK   ++ 
Sbjct: 125 GIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDR 184

Query: 258 ALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE-MQRNGVAADTWTYRTF 315
           AL L  EM + + I+PDVVI+N++  GL   ++   A+K  DE M   G +    TY + 
Sbjct: 185 ALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSL 244

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I G CK   +  AV +++ +   K +  I +Y+ +IDGL K+GR+  A  + R +     
Sbjct: 245 IRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGC 304

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
             NVV Y+ +I GLC  G +D A  L+  M+ +   PN  T+  LI  F R +     + 
Sbjct: 305 ELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALG 364

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNE 463
           L   +++   + D ++ + VV  L +  
Sbjct: 365 LFDHIRDYCPL-DVAMYTAVVSGLCRER 391



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 19/311 (6%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L+ C +P  VT+TSLI+G C   ++  A  ++  +     +P + +Y+ +++GL +   
Sbjct: 230 VLQGC-SPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGR 288

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  +  EM        + CE N V YTT+IDGLCK GF+D A  L   MK     PN
Sbjct: 289 VYDAYRVVREMET------LGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPN 342

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             TY ++I  FC       A  LF  + D     +V  +  ++  LC+  ++D+A  L  
Sbjct: 343 QRTYATLIDTFCRNDRTETALGLFDHIRDY-CPLDVAMYTAVVSGLCRERRLDDARALFR 401

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM----GCKHTVFSYSILINGY 249
            M   GV  D   YN LL G     R    +E F  +E +    GC   + +Y+ +I G 
Sbjct: 402 EMRLAGVSADTHAYNVLLHG---AFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGC 458

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C    +E  + L+ EM  +GI PD   ++ L   L    ++ RAF L +EM  +G++  +
Sbjct: 459 C----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPS 514

Query: 310 WTYRTFIDGLC 320
                 +  LC
Sbjct: 515 GVLGRVVARLC 525



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 6/250 (2%)

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVV 275
           +G  N A        + G     F  S++I+  CK+ ++ GAL + + ML  G   P+  
Sbjct: 37  SGDANAAARFLREKTAAGSIFPGFLSSVVIDRACKSGDLRGALLILATMLHSGTPPPNQH 96

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
              +L   L +  ++  A +  + M+  G+  D  T+   I G CKN  +  A E+F  +
Sbjct: 97  AFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEM 156

Query: 336 -RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV-PNVVTYSIMIGGLCNDG 393
            +  +C+ D   Y  LIDG CK  R++ ALEL R +     + P+VV Y+ ++ GLC   
Sbjct: 157 IKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSN 216

Query: 394 QMDKARDLFLD--MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           +  +A   FLD  M      P V+T+  LIRG  +  +    + + + M E  + P    
Sbjct: 217 RFLEAWK-FLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVS 275

Query: 452 VSIVVDLLAK 461
            S+++D L+K
Sbjct: 276 YSVIIDGLSK 285



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D   +T+++ GLC E R+ +A ALF ++R+ G   D   Y  L++G  R+     A  + 
Sbjct: 376 DVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRIL 435

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKE-GFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           EE+ +  G     C  N +TY T+I G C E G V     L  +M+ + I P+  TY+++
Sbjct: 436 EELGDDPG-----CVANLLTYNTVIAGCCLESGMV-----LFYEMRQRGIAPDFATYSAL 485

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           I     + +   A  L  EM+  G+ P       ++  LC + + D A++++++ +
Sbjct: 486 IDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKVIEMAM 541


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 225/448 (50%), Gaps = 6/448 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F V  R+       D V + SL+ GLC    +  A  +   ++  G EP+V T
Sbjct: 187 VGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVT 246

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT  +   CR +    A +L+EEM       GV+  P+ VT + ++ GLCK+G   +A  
Sbjct: 247 YTMFIVEYCRRNAVDDAFSLYEEMVRK----GVL--PDVVTLSALVGGLCKDGRFSEAYA 300

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M+     PN VTY  +I     A+  NE+  L  E++ +GV  +++ +  +MD LC
Sbjct: 301 LFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLC 360

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+DEA  +    +     P+  TY  L+D  C  G V+ A+++   ME       V 
Sbjct: 361 KEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVV 420

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           ++S +ING  K   +  A     EM  +GI P+VV + T+  G F+    E A  ++ EM
Sbjct: 421 TFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEM 480

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  + +   + ++GL KNG I +A  LF  +       D   Y +LIDGL K+G L
Sbjct: 481 LCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNL 540

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A ++ + L    L+P+ V Y++ I  LC  G+  +A     +M+   + P+ +T++ +
Sbjct: 541 PAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTM 600

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD 448
           I    R  + +K ++LL+ MK  ++ P+
Sbjct: 601 IAAQSREGKTAKALKLLNGMKRSSIKPN 628



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 239/467 (51%), Gaps = 8/467 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V   F +   +++    PD VT ++L+ GLC + R  EA ALF ++   G  P+  TY  
Sbjct: 260 VDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCM 319

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++ L +      +L+L  E+ +     GVV +   + YT ++D LCKEG +D+AK++  
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVS----RGVVMD--LIMYTALMDWLCKEGKIDEAKDMFR 373

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
                N  PN VTYT +I   C A + + A+++  EM ++ + PNVVTF+ I++ L K G
Sbjct: 374 HALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRG 433

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDG-FCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            + +A+  +  M + G+ P+  TY T++DG F   G+   A +++  M   G +   F  
Sbjct: 434 WVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQ-EAALDVYHEMLCEGVEVNKFIV 492

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
             L+NG  KN +IE A +L+ EM  +G+  D V + TL  GLF+   +  AFK+  E+  
Sbjct: 493 DSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTE 552

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D   Y  FI+ LC  G   EA      ++    + D   YN++I    + G+   
Sbjct: 553 KNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAK 612

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           AL+L   +    + PN++TYS +I GL   G ++KA+ L  +M  +   P  +T   +++
Sbjct: 613 ALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ 672

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
              +      ++E+   M    +  D ++ + +V +L  N ++  ++
Sbjct: 673 ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAM 719



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 211/429 (49%), Gaps = 6/429 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+T  I   C  + + +A +L+ ++   G  PDV T + LV GLC+      A  L
Sbjct: 242 PNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYAL 301

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM        +   PN VTY  +ID L K    +++  LL ++  + +  +++ YT++
Sbjct: 302 FREMEK------IGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTAL 355

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C     +EAK +F   +     PN VT+ V++D LCK G +D A ++L  M +  +
Sbjct: 356 MDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSI 415

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  T++++++G    G V  A +    M+  G    V +Y  +I+G  K    E AL 
Sbjct: 416 SPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALD 475

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +Y EML +G++ +  I ++L  GL +  ++E+A  LF EM   GV  D   Y T IDGL 
Sbjct: 476 VYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLF 535

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G +  A ++   L       D   YN  I+ LC  G+ + A      +    L P+ V
Sbjct: 536 KTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQV 595

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ MI     +G+  KA  L   M+ +++ PN+IT+  LI G        K   LL++M
Sbjct: 596 TYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEM 655

Query: 441 KEINVMPDA 449
                 P +
Sbjct: 656 SSSGFSPTS 664



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 230/481 (47%), Gaps = 40/481 (8%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L+S  + D V++  ++ G  +E   +   AL  ++   G   D  T  T++ GLCR   
Sbjct: 94  LLRSSESVDTVSYNVVMSGF-SEQGGLAPEALLAEMCKRGVPFDAVTVNTVLVGLCRDGR 152

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  L E M  G G  G+    + V + +++DG CK G ++ A  +  +MK + +  +
Sbjct: 153 VDRAAALAEVMVRGGGIGGL----DVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVD 208

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VV Y S++ G C A + + A+ +   M   GV+PNVVT+ + + E C+   +D+A  L +
Sbjct: 209 VVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYE 268

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M++ GV PD  T + L+ G C  GR + A  LF  ME +G      +Y +LI+   K +
Sbjct: 269 EMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQ 328

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
               +LSL  E++S+G+  D++++  L   L +  +++ A  +F     +    +  TY 
Sbjct: 329 RGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYT 388

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             ID LCK G +  A ++   +       ++  ++S+I+GL K G +  A +  R +   
Sbjct: 389 VLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKER 448

Query: 374 VLVPNVVTYSIMI-----------------------------------GGLCNDGQMDKA 398
            + PNVVTY  +I                                    GL  +G+++KA
Sbjct: 449 GIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKA 508

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             LF +M E  V+ + + +  LI G  +        ++  ++ E N++PDA + ++ ++ 
Sbjct: 509 EALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINC 568

Query: 459 L 459
           L
Sbjct: 569 L 569



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 230/495 (46%), Gaps = 41/495 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +    L    TP+ VT+T LI  LC    +  A  + +++      P+V T+
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF 422

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG------------- 108
           ++++NGL +      A +   EM     E G+  +PN VTY T+IDG             
Sbjct: 423 SSIINGLVKRGWVGKATDYMREMK----ERGI--DPNVVTYGTVIDGSFKCLGQEAALDV 476

Query: 109 ----LC------------------KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
               LC                  K G ++KA+ L  +M ++ +  + V YT++I G   
Sbjct: 477 YHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFK 536

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
             +   A ++  E+ ++ + P+ V +NV ++ LC  GK  EA   L+ M   G++PD  T
Sbjct: 537 TGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVT 596

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YNT++      G+   A +L   M+    K  + +YS LI G  +   +E A  L +EM 
Sbjct: 597 YNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMS 656

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           S G  P  + H  +     +  + +   ++ + M   G+ AD   Y T +  LC NG   
Sbjct: 657 SSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTR 716

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A+ +   +       D   +N+LI G  KSG L+ A   +  +    + PNV T++ ++
Sbjct: 717 KAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLL 776

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
           GGL + G++ ++  +  +M++  + P+ +T+D+L+ G+ + +   + + L  +M     +
Sbjct: 777 GGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFL 836

Query: 447 PDASIVSIVVDLLAK 461
           P  S  + ++   +K
Sbjct: 837 PKVSTYNALISDFSK 851



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 212/441 (48%), Gaps = 6/441 (1%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           SL+ GL    +I +A ALF ++   G   D   YTTL++GL +T +   A  + +E+   
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK 553

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
           N        P+ V Y   I+ LC  G   +A+  L +M+   +KP+ VTY ++I      
Sbjct: 554 N------LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSRE 607

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
               +A +L   M    ++PN++T++ ++  L + G +++A  LL+ M   G  P + T+
Sbjct: 608 GKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTH 667

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             +L       R +   E+   M + G    +  Y+ L+   C N     A+ +  EM  
Sbjct: 668 RRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSG 727

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +GI PD +  N L +G F+   ++ AF  +D+M  +G++ +  T+ T + GL   G I E
Sbjct: 728 RGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGE 787

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           +  + + ++    E     Y+ L+ G  K      A+ L+  +     +P V TY+ +I 
Sbjct: 788 SDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALIS 847

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
                G M +A++LF +M+   V+P   T+D+L+ G+ ++   ++V + L  MKE    P
Sbjct: 848 DFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSP 907

Query: 448 DASIVSIVVDLLAKNEISLNS 468
               +S +    +K  +S  +
Sbjct: 908 SKGTLSSISRAFSKPGMSWEA 928



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 151/334 (45%), Gaps = 6/334 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +    +L  + +S   P+ +T+++LI GL     + +A  L  ++   G  P   T+
Sbjct: 608 GKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTH 667

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++    +   + + L + E M N       +C   TV Y T++  LC  G   KA  +
Sbjct: 668 RRVLQACSQGRRSDLILEIHEWMMNAG-----LCADITV-YNTLVRVLCYNGMTRKAMVV 721

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  + I P+ +T+ ++I G   +   + A   + +M+  G+ PNV TFN ++  L  
Sbjct: 722 LEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLES 781

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ E+  +L+ M + G+ P   TY+ L+ G+        A  L+  M   G    V +
Sbjct: 782 AGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVST 841

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+ + K   +  A  L++EM ++G+ P    ++ L  G  ++       K   +M+
Sbjct: 842 YNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMK 901

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             G +    T  +      K G   EA  L   L
Sbjct: 902 EKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 122/234 (52%), Gaps = 9/234 (3%)

Query: 241 SYSILINGYCKNKEIEGALS---LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           SY+++++G+ +    +G L+   L +EM  +G+  D V  NT+ VGL    +V+RA  L 
Sbjct: 105 SYNVVMSGFSE----QGGLAPEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 298 DEMQRNGVAA--DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + M R G     D   + + +DG CK G +  A  +   ++      D+  YNSL+ GLC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           ++G ++ A ++  ++    + PNVVTY++ I   C    +D A  L+ +M    V+P+V+
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           T   L+ G  +    S+   L  +M++I   P+     +++D LAK +    SL
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 200/371 (53%), Gaps = 13/371 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  + + F  L+KGLCA+ R  +A  +  + +   GC P+VF+
Sbjct: 104 GRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFS 163

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T ++ GLC  + +  AL L   MA+  G     C PN V+Y+T+ DGL K G  DKA  
Sbjct: 164 HTIILKGLCHENRSQEALELLHMMADDGGG----CLPNVVSYSTVTDGLLKGGDPDKAYA 219

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I PNVVTY+S+I   C  +  ++A  +   M+  GV PN  T+  ++   C
Sbjct: 220 TYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFC 279

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G++ EA + L+ M  +GV P+  TY++ +D  C  GR   A+++F SM   G K  + 
Sbjct: 280 SSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDIT 339

Query: 241 SYSILINGYCKNKEIEGAL----SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           +YS L++GY     IEGAL     L+  M+   ++PD  + NTL     +  +V+ A  +
Sbjct: 340 TYSSLLHGY----AIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLV 395

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F +M+  G+  +  TY T I+G CK   +  A+ LF  +       +   YN ++ GL +
Sbjct: 396 FSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFR 455

Query: 357 SGRLEIALELF 367
           +GR   A E +
Sbjct: 456 TGRTGTAKEFY 466



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 198/417 (47%), Gaps = 14/417 (3%)

Query: 28  SLIKGLCAESRIMEAAAL--FTKLRVFGCE---PDVFTYTTLVNGLCRTSHTIVALNLFE 82
           SL   L   +R   AAA+  F ++   G     P V TY  L+   C      +      
Sbjct: 55  SLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALG 114

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ-MKDKNIKPNVVTYTSVI 141
            +     + G   EP  + +  ++ GLC +   D A +++L+ M +    PNV ++T ++
Sbjct: 115 HVV----KKGFRVEP--IIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIIL 168

Query: 142 RGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +G C+     EA  L   M D G    PNVV+++ + D L K G  D+A      M+   
Sbjct: 169 KGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRR 228

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+  TY++++   C    ++ A E+   M   G     F+Y+ L++G+C + ++  A+
Sbjct: 229 ILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAI 288

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
               +M S G++P+VV +++    L +  +   A K+F  M + G+  D  TY + + G 
Sbjct: 289 KFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGY 348

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
              G +VE   LF  +     + D   +N+LI    K G+++ A+ +F  +    L PN 
Sbjct: 349 AIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNC 408

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           VTY+ +I G C   +M+ A  LF +M  N V PN IT++++++G  R        E 
Sbjct: 409 VTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEF 465



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 164/357 (45%), Gaps = 38/357 (10%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P V TY  +I   C A   +        ++ +G +   + FN ++  LC + + D+A 
Sbjct: 86  VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145

Query: 190 RL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILI 246
            + L  M + G  P+ F++  +L G C   R   A EL   M  +  GC   V SYS + 
Sbjct: 146 DIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVT 205

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G  K  + + A + Y EML + I P+VV ++++   L +   +++A ++ D M +NGV 
Sbjct: 206 DGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVT 265

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            + +TY + + G C +G + EA++    +     E ++  Y+S +D LCK+GR   A ++
Sbjct: 266 PNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325

Query: 367 FRSLPCGVLVPNVVTYSIMIGGL-----------------------------------CN 391
           F S+    L P++ TYS ++ G                                      
Sbjct: 326 FYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAK 385

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            G++D+A  +F  M    + PN +T++ LI G+ +I      + L  +M    V P+
Sbjct: 386 QGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPN 442



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 7/178 (3%)

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF---DIRA 346
            E A  +FDE+ R G+ A   +    +  + ++     AV  F+ +           +  
Sbjct: 34  AEDALDVFDELLRRGIGAPIRSLNGALADVARDN-PAAAVSRFNRMARAGASMVTPTVHT 92

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL-DM 405
           Y  LI   C +GRL++       +         + ++ ++ GLC D + D A D+ L  M
Sbjct: 93  YGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGM 152

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI--NVMPDASIVSIVVDLLAK 461
            E   VPNV +  ++++G    N   + +ELLH M +     +P+    S V D L K
Sbjct: 153 TELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLK 210


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 197/373 (52%), Gaps = 28/373 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F VL +ILK    PD  TFT+LI+GLC E +I EA  LF K+   G +P+V T
Sbjct: 93  LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 152

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+  +T  A+ L   M  GN      C+P+ V YT+IID LCK+  V +A  
Sbjct: 153 YGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVVIYTSIIDSLCKDRQVTEAFN 206

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  QM  + I P++ TYTS++   C   +W     L  +M++  + P+VV F+ ++D LC
Sbjct: 207 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 266

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  ++D+MIQ GV PD  TY TL+DG CL   ++ A ++F  M   G    V 
Sbjct: 267 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 326

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL-FVGLFEIHQVERAFKLFDE 299
           SY+ LIN     K+  G +SL   +      PD V    +  +   ++   E+   L +E
Sbjct: 327 SYTTLINA--GKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNE 384

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M  + +  +   + T +D LCK G ++EA                   + ++D + K G 
Sbjct: 385 MVNSKIMPNVVIFSTVVDALCKEGKVMEA-------------------HDVVDMMIKRGV 425

Query: 360 LEIALELFRSLPC 372
              A+++F ++ C
Sbjct: 426 EPNAVKVFDTMKC 438



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 198/410 (48%), Gaps = 10/410 (2%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L     P  V F  L+  +          +L T++  FG  P+V+T   L+N  C  +
Sbjct: 35  RLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLN 94

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A ++  ++        +  +P+  T+TT+I GLC EG + +A  L  +M D+  +P
Sbjct: 95  RVGFAFSVLAKI------LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQP 148

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           NVVTY ++I G C   + + A RL   M     QP+VV +  I+D LCK+ ++ EA  L 
Sbjct: 149 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 208

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  G+ PD FTY +L+   C      H   L   M +      V  +S +++  CK 
Sbjct: 209 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 268

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            ++  A  +   M+ +G++PDVV + TL  G     +++ A K+FD M R G A D  +Y
Sbjct: 269 GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 328

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFD-IRAYNSLIDGLCKSGRLEIALELFRSLP 371
            T I+   K+G  +  V L   + ++K   D ++     +    K    E    L   + 
Sbjct: 329 TTLINAGKKDGGGL--VSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMV 386

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI-TFDML 420
              ++PNVV +S ++  LC +G++ +A D+   M +  V PN +  FD +
Sbjct: 387 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTM 436



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 182/366 (49%), Gaps = 3/366 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ V +  ++  + K         L  QM    + PNV T   +I  FC+      A  +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             +++  G QP+  TF  ++  LC  GK+ EA  L D MI  G +P+  TY TL++G C 
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  + A  L  SME   C+  V  Y+ +I+  CK++++  A +L+S+M+ +GI PD+  
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +L   L  + + +    L ++M  + +  D   + T +D LCK G + EA E+   + 
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI-GGLCNDGQM 395
               E D+  Y +L+DG C    ++ A+++F  +      P+V++Y+ +I  G  + G +
Sbjct: 283 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGL 342

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
              +++   ++E          +++ +  +++ E  +   LL++M    +MP+  I S V
Sbjct: 343 VSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRT--LLNEMVNSKIMPNVVIFSTV 400

Query: 456 VDLLAK 461
           VD L K
Sbjct: 401 VDALCK 406



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 153/322 (47%), Gaps = 6/322 (1%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ---HGVRPDAFTY 207
           ++A   F  ++     P++V F  ++  +    KM   S +L L  Q    GV P+ +T 
Sbjct: 27  DDALSSFNRLLHMHPPPSIVDFAKLLTSI---AKMKHYSTVLSLSTQMDSFGVPPNVYTL 83

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N L++ FC   RV  A  +   +  +G +    +++ LI G C   +I  AL L+ +M+ 
Sbjct: 84  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 143

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G +P+VV + TL  GL ++     A +L   M++     D   Y + ID LCK+  + E
Sbjct: 144 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 203

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  LF  +       DI  Y SL+  LC     +    L   +    ++P+VV +S ++ 
Sbjct: 204 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 263

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC +G++ +A ++   M +  V P+V+T+  L+ G    +E  + +++   M      P
Sbjct: 264 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 323

Query: 448 DASIVSIVVDLLAKNEISLNSL 469
           D    + +++   K+   L SL
Sbjct: 324 DVISYTTLINAGKKDGGGLVSL 345



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 127/273 (46%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + ++     P    +  LL         +    L   M+S G    V++ +I
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LIN +C    +  A S+ +++L  G +PD     TL  GL    ++  A  LFD+M   G
Sbjct: 86  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY T I+GLCK G    A+ L  ++    C+ D+  Y S+ID LCK  ++  A 
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + P++ TY+ ++  LCN  +      L   M  + ++P+V+ F  ++   
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 265

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +  + ++  E++  M +  V PD    + ++D
Sbjct: 266 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 298



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 35/242 (14%)

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           ++ ALS ++ +L     P +V    L   + ++        L  +M   GV  + +T   
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            I+  C    +  A  +   +  L  + D   + +LI GLC  G++  AL LF  +    
Sbjct: 86  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145

Query: 375 LVPNVVTYSIMIGG-----------------------------------LCNDGQMDKAR 399
             PNVVTY  +I G                                   LC D Q+ +A 
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +LF  M    + P++ T+  L+     + E   V  LL++M    ++PD  I S VVD L
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 265

Query: 460 AK 461
            K
Sbjct: 266 CK 267


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 242/457 (52%), Gaps = 34/457 (7%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+  +I  LC E  +  A +LFT+++  G  PD+ TY +L++G  +       + +FE+M
Sbjct: 58  TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 117

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            + +      C+P+ +TY  +I+  CK   + KA E L +MK   +KPNVVTY++ I  F
Sbjct: 118 KDAD------CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAF 171

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C      EA + F++M    + PN  T+  ++D  CK G + EA +L++ ++Q G++ + 
Sbjct: 172 CKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNV 231

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  LLDG C  GR+  A+E+F +M + G      +Y+ L++G+ K KE+E A  +  E
Sbjct: 232 VTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKE 291

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT---------- 314
           M  K IKPD++++ T+  GL    ++E A  L  E++ +G+  +   Y T          
Sbjct: 292 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 351

Query: 315 -------------FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
                         +DGLCKN     A +LF  +       D  AY +LIDG  K G L+
Sbjct: 352 ATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQ 411

Query: 362 IALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            AL L  R +  G+ + ++  Y+ +I GL + GQ+ KAR+L  +M    V+P+ + +  L
Sbjct: 412 EALNLRDRMIEIGMEL-DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCL 470

Query: 421 IRGFIRINEPSKVIELLHKMKE---INVMPDASIVSI 454
           I+ +  + +  + +EL ++M +   I  + D ++ S+
Sbjct: 471 IKKYYALGKVDEALELQNEMAKRGMITGLSDHAVPSV 507



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 190/355 (53%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +++A E  L+M+   + P   +  +++         + +++ F +M   G++ +V T+N+
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++D LCK G ++ A  L   M + G  PD  TYN+L+DG    G ++    +F  M+   
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C   V +Y+ LIN +CK + +  A     EM + G+KP+VV ++T      +   ++ A 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           K F +M+R  +  + +TY + ID  CK G + EA++L   +     + ++  Y +L+DGL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C+ GR++ A E+FR++    + PN  TY+ ++ G     +M+ A+D+  +M+E  + P++
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + +  ++ G    +   +   L+ ++KE  +  +A I + ++D   K+  +  +L
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 177/364 (48%), Gaps = 18/364 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   F  L  +  +   P+ VT+++ I   C E  + EA   F  +R     P+ FTYT
Sbjct: 141 RMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 200

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++  C+  +   AL L EE+     +       N VTYT ++DGLC+EG + +A+E+ 
Sbjct: 201 SLIDANCKAGNLAEALKLVEEILQAGIKL------NVVTYTALLDGLCEEGRMKEAEEVF 254

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M +  + PN  TYT+++ GF  AK+   AK +  EM ++ ++P+++ +  I+  LC  
Sbjct: 255 RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 314

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            +++EA  L+  + + G+  +A  Y TL+D +  +G+   A  L   M            
Sbjct: 315 SRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD---------- 364

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
             L++G CKN   E A  L+ EML KG+ PD + +  L  G  +   ++ A  L D M  
Sbjct: 365 --LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIE 422

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  D   Y   I GL  +G + +A  L   +       D   Y  LI      G+++ 
Sbjct: 423 IGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDE 482

Query: 363 ALEL 366
           ALEL
Sbjct: 483 ALEL 486



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 173/344 (50%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P   +   ++  L K G  D +++    M    IK +V TY  +I   C   D   A+ L
Sbjct: 19  PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 78

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F +M + G  P++VT+N ++D   K G +DE   + + M      PD  TYN L++ FC 
Sbjct: 79  FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 138

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             R+  A E    M++ G K  V +YS  I+ +CK   ++ A+  + +M    + P+   
Sbjct: 139 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 198

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +L     +   +  A KL +E+ + G+  +  TY   +DGLC+ G + EA E+F  + 
Sbjct: 199 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 258

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 +   Y +L+ G  K+  +E A ++ + +    + P+++ Y  ++ GLCN+ +++
Sbjct: 259 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 318

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +A+ L  +++E+ +  N + +  L+  + +  + ++ + LL +M
Sbjct: 319 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 362



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 156/304 (51%), Gaps = 18/304 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++    ++  IL++    + VT+T+L+ GLC E R+ EA  +F  +   G  P+  TY
Sbjct: 210 GNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETY 269

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T LV+G  +      A ++ +EM           +P+ + Y TI+ GLC E  +++AK L
Sbjct: 270 TALVHGFIKAKEMEYAKDILKEMKEK------CIKPDLLLYGTILWGLCNESRLEEAKLL 323

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + ++K+  I  N V YT+++  +  +    EA  L  EM+D            ++D LCK
Sbjct: 324 IGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCK 371

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N   + A +L D M+  G+ PD   Y  L+DG    G +  A  L   M  +G +  + +
Sbjct: 372 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 431

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G   + +++ A +L  EM+ KG+ PD V++  L    + + +V+ A +L +EM 
Sbjct: 432 YTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMA 491

Query: 302 RNGV 305
           + G+
Sbjct: 492 KRGM 495


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/407 (31%), Positives = 211/407 (51%), Gaps = 10/407 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
            TF  +++ LC+  +   A  L  ++      P+  TY T++ G C       AL++  E
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 170

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIR 142
           M    G       PN  TY T+I G CK G VD+A ++  +M  K  +KP  V Y ++I 
Sbjct: 171 MRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 225

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+C     + A      M+++GV   V T+N+++  L  +G+  EA  L++ M   G+ P
Sbjct: 226 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 285

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D FTYN L++G C  G V  A E+F +M   G + TV +Y+ LI    K  +++    L+
Sbjct: 286 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 345

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            E + +GI+PD+V++N L         ++RAF++  EM++  +A D  TY T + GLC  
Sbjct: 346 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 405

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G + EA +L   +     + D+  YN+LI G    G ++ AL +   +      P ++TY
Sbjct: 406 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 465

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           + +I GLC +GQ D A ++  +M EN + P+  T+  LI G    +E
Sbjct: 466 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 215/432 (49%), Gaps = 19/432 (4%)

Query: 42  AAALFT---KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           A ALF    +LR+  C     T+  ++  LC       AL L  +M            PN
Sbjct: 98  AFALFADMFRLRLPLC---TTTFNIMLRHLCSAGKPARALELLRQMP----------RPN 144

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            VTY T+I G C  G V  A +++ +M+++  I PN  TY +VI G+C     +EA ++F
Sbjct: 145 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 204

Query: 158 IEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            EM+ +G V+P  V +N ++   C  GK+D A    D M++ GV     TYN L+    +
Sbjct: 205 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 264

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR   A EL   M   G    VF+Y+ILING+CK   ++ AL ++  M  +G++  VV 
Sbjct: 265 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 324

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +  L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   + 
Sbjct: 325 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 384

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +   D   YN+L+ GLC  GR++ A +L   +    + P++VTY+ +I G    G + 
Sbjct: 385 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI-VSIV 455
            A  +  +M      P ++T++ LI+G  +  +      ++ +M E  + PD S  +S++
Sbjct: 445 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504

Query: 456 VDLLAKNEISLN 467
             L  ++E +++
Sbjct: 505 EGLTTEDERAID 516



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 190/382 (49%), Gaps = 6/382 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTS 72
           +L+    P+AVT+ ++I G C+  R+  A  +  ++R   G  P+ +TY T+++G C+  
Sbjct: 136 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 195

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ +F+EM    GE     +P  V Y  +I G C +G +D A     +M ++ +  
Sbjct: 196 RVDEAVKVFDEMLT-KGE----VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM 250

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            V TY  ++          EA  L  EM  +G+ P+V T+N++++  CK G + +A  + 
Sbjct: 251 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 310

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M + GVR    TY  L+      G+V    +LF      G +  +  Y+ LIN +  +
Sbjct: 311 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 370

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             I+ A  +  EM  K I PD V +NTL  GL  + +V+ A KL DEM   G+  D  TY
Sbjct: 371 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 430

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I G    G + +A+ + + +        +  YN+LI GLCK+G+ + A  + + +  
Sbjct: 431 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 490

Query: 373 GVLVPNVVTYSIMIGGLCNDGQ 394
             + P+  TY  +I GL  + +
Sbjct: 491 NGITPDDSTYISLIEGLTTEDE 512



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 167/320 (52%), Gaps = 7/320 (2%)

Query: 1   MGRVSHGFVVLGRIL-KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +GRV     V   +L K    P+AV + +LI G C + ++  A     ++   G    V 
Sbjct: 194 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 253

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY  LV+ L        A  L EEM  G G       P+  TY  +I+G CKEG V KA 
Sbjct: 254 TYNLLVHALFMDGRGTEAYELVEEMG-GKG-----LAPDVFTYNILINGHCKEGNVKKAL 307

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+   M  + ++  VVTYT++I          E  +LF E + +G++P++V +N +++  
Sbjct: 308 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 367

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
             +G +D A  ++  M +  + PD  TYNTL+ G CL GRV+ A++L   M   G +  +
Sbjct: 368 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDL 427

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+GY    +++ AL + +EM++KG  P ++ +N L  GL +  Q + A  +  E
Sbjct: 428 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 487

Query: 300 MQRNGVAADTWTYRTFIDGL 319
           M  NG+  D  TY + I+GL
Sbjct: 488 MVENGITPDDSTYISLIEGL 507



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 22/214 (10%)

Query: 257 GALSLYSEMLS--KGIKPDVVIH----------NTLFVGLFEIHQVERAFKLFDEMQRNG 304
            AL+L+  +LS  K + P  V+           N L      +     + +L+  M+   
Sbjct: 19  AALALFKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLS 78

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +   T +    +  L        A  LF  +  L+       +N ++  LC +G+   AL
Sbjct: 79  LPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 134

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDMLIRG 423
           EL R +P     PN VTY+ +I G C+ G++  A D+  +M E   + PN  T+  +I G
Sbjct: 135 ELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISG 190

Query: 424 FIRINEPSKVIELLHKM-KEINVMPDASIVSIVV 456
           + ++    + +++  +M  +  V P+A + + ++
Sbjct: 191 WCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 224



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 41/146 (28%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++G + K    PD VT+ +L++GLC   R+ EA  L  ++   G +PD+ TY
Sbjct: 371 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 430

Query: 62  TTLV-----------------------------------NGLCRTSHTIVALNLFEEMAN 86
            TL+                                    GLC+      A N+ +EM  
Sbjct: 431 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV- 489

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKE 112
              E G+   P+  TY ++I+GL  E
Sbjct: 490 ---ENGIT--PDDSTYISLIEGLTTE 510


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 222/448 (49%), Gaps = 6/448 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V G + +    P  VT+ +++   C E R+ +A  L ++++  GC P+  TY  LVNGL 
Sbjct: 202 VYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLS 261

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  L EEM N           +  TY  +I+G C++G   +A +L+ +M ++ 
Sbjct: 262 KKGELEQAKGLIEEMLNSG------LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P + TY +++ G C        +  F +M+     P++V+FN ++   C+ G + EA 
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L D +    + P   TYNTL+ G C+ G ++ A  L   M   G    +F+Y+IL+NG 
Sbjct: 376 LLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGC 435

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K   +  A   ++EMLSKG+KPD   +NT  VG  +I     AF + +EM   G   D 
Sbjct: 436 FKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDV 495

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY  F+  LC+ G   EA +L   +       D   Y S+I+G  K+G L  A E+F  
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P+VVTY+++I        +D A   F  M E +V  NVIT++ +I G      
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVD 457
             +  +   +M+E  ++P+    +I+++
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILIN 643



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 222/461 (48%), Gaps = 6/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  + +    P+ VT+  L+ GL  +  + +A  L  ++   G     +TY
Sbjct: 229 GRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTY 288

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+    + A +L EEM N          P   TY T++ GLCK   V   +  
Sbjct: 289 NPLINGFCQKGLFVEAFDLVEEMVNRRAF------PTLSTYNTLMYGLCKWVQVTGVRLR 342

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M      P++V++ S++ G+C     +EA  LF E+  + + P V+T+N ++  LC 
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A RL   M   G+ PD FTY  L++G    G V+ A+  F  M S G K   F+
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  I G  K  +   A S+  EML+ G  PDV+ +N     L +    E A  L + M 
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  D  TY + I+G  KNG++ +A E+F+ +        +  Y  LI        L+
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A   F  +    +  NV+TY+ +I GLC   +MD+A   F +MEE  ++PN  ++ +LI
Sbjct: 583 LAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                +    + + L  +M +  + PD+   S+ +  L ++
Sbjct: 643 NESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRD 683



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 196/389 (50%), Gaps = 5/389 (1%)

Query: 79  NLFEEMANGNG---EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           NL  +  N  G   +FG+  +P  VTY T++D  CKEG VD+A ELL +M+++   PN V
Sbjct: 194 NLLSKAKNVYGMMEQFGI--KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY  ++ G     +  +AK L  EM++ G+  +  T+N +++  C+ G   EA  L++ M
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +     P   TYNTL+ G C   +V   +  F  M        + S++ L+ GYC+   I
Sbjct: 312 VNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCI 371

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  L+ E+  + + P V+ +NTL  GL     ++ A +L  EM   G+  D +TY   
Sbjct: 372 SEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           ++G  K GY+  A   F+ +     + D  AYN+ I G  K     +A  +   +     
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+V+TY++ +  LC  G  ++A DL  +M  + ++P+ +T+  +I GF++     K  E
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           + ++M    V P     ++++   A  ++
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 191/398 (47%), Gaps = 23/398 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T+ +L+ GLC   ++      F+ +      PD+ ++ +L+ G CRT     A  L
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 81  FEEMANGNGEFGVVCE---PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           F+E+          C    P  +TY T+I GLC  G++D A  L  +M D+ + P++ TY
Sbjct: 378 FDELK---------CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTY 428

Query: 138 TSVIRGFCYAKDW-NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           T ++ G C+   + + A+  F EM+ +G++P+   +N  +    K      A  + + M+
Sbjct: 429 TILVNG-CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEML 487

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G  PD  TYN  +   C  G    A +L  +M S G      +Y+ +ING+ KN  + 
Sbjct: 488 AAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLR 547

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A  +++EMLSKG+ P VV +  L         ++ AF  F +M    V A+  TY   I
Sbjct: 548 KAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAII 607

Query: 317 DGLCKNGYIVEAVELFHTLR---ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           +GLC    + EA + F  +    IL  +F   +Y  LI+  C  G  E AL L+R +   
Sbjct: 608 NGLCMTRRMDEAYKYFDEMEEKGILPNKF---SYTILINESCNMGYWEEALRLYREMLDR 664

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKAR---DLFLDMEEN 408
            + P+  T+S+ +  L  D Q+   +    L  ++E+N
Sbjct: 665 KIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDN 702



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 143/309 (46%), Gaps = 50/309 (16%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFT---KLRVFGCEPD 57
           +G VS        +L     PD   + + I G   E +I + +  F+   ++   G  PD
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG---EMKIADTSVAFSMQEEMLAAGFPPD 494

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           V TY   V+ LC+  +   A +L E M +     G++  P+ VTYT+II+G  K G + K
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSD----GLI--PDHVTYTSIINGFVKNGHLRK 548

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A+E+  +M  K + P+VVTYT +I      +  + A   F +M+++ V  NV+T+N I++
Sbjct: 549 AREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIIN 608

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LC   +MDEA +  D M + G+ P+ F+Y                              
Sbjct: 609 GLCMTRRMDEAYKYFDEMEEKGILPNKFSY------------------------------ 638

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL---FEIHQVERAF 294
                +ILIN  C     E AL LY EML + I+PD   H+     L   +++H V+   
Sbjct: 639 -----TILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVE 693

Query: 295 KLFDEMQRN 303
            L   ++ N
Sbjct: 694 SLIQNVEDN 702



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 90/190 (47%)

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L ++ +M+  G+ PDV   N +   L + + + +A  ++  M++ G+     TY T +D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G + +A+EL   ++   C  +   YN L++GL K G LE A  L   +    L  +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
             TY+ +I G C  G   +A DL  +M      P + T++ L+ G  +  + + V     
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 439 KMKEINVMPD 448
            M +    PD
Sbjct: 345 DMLKSKFTPD 354


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/407 (31%), Positives = 211/407 (51%), Gaps = 10/407 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
            TF  +++ LC+  +   A  L  ++      P+  TY T++ G C       AL++  E
Sbjct: 42  TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 97

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIR 142
           M    G       PN  TY T+I G CK G VD+A ++  +M  K  +KP  V Y ++I 
Sbjct: 98  MRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 152

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+C     + A      M+++GV   V T+N+++  L  +G+  EA  L++ M   G+ P
Sbjct: 153 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 212

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D FTYN L++G C  G V  A E+F +M   G + TV +Y+ LI    K  +++    L+
Sbjct: 213 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 272

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            E + +GI+PD+V++N L         ++RAF++  EM++  +A D  TY T + GLC  
Sbjct: 273 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 332

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G + EA +L   +     + D+  YN+LI G    G ++ AL +   +      P ++TY
Sbjct: 333 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 392

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           + +I GLC +GQ D A ++  +M EN + P+  T+  LI G    +E
Sbjct: 393 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 216/432 (50%), Gaps = 19/432 (4%)

Query: 42  AAALFT---KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           A ALF    +LR+  C     T+  ++  LC       AL L  +M            PN
Sbjct: 25  AFALFADMFRLRLPLC---TTTFNIMLRHLCSAGKPARALELLRQMP----------RPN 71

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            VTY T+I G C  G V  A +++ +M+++  I PN  TY +VI G+C     +EA ++F
Sbjct: 72  AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 131

Query: 158 IEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            EM+ +G V+P  V +N ++   C  GK+D A    D M++ GV     TYN L+    +
Sbjct: 132 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 191

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR   A EL   M   G    VF+Y+ILING+CK   ++ AL ++  M  +G++  VV 
Sbjct: 192 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 251

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   + 
Sbjct: 252 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 311

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +   D   YN+L+ GLC  GR++ A +L   +    + P++VTY+ +I G    G + 
Sbjct: 312 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 371

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI-VSIV 455
            A  +  +M      P ++T++ LI+G  +  +      ++ +M E  + PD S  +S++
Sbjct: 372 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 431

Query: 456 VDLLAKNEISLN 467
             L  ++E +++
Sbjct: 432 EGLTTEDERAID 443



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 192/382 (50%), Gaps = 6/382 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTS 72
           +L+    P+AVT+ ++I G C+  R+  A  +  ++R   G  P+ +TY T+++G C+  
Sbjct: 63  LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 122

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ +F+EM    GE     +P  V Y  +I G C +G +D A     +M ++ +  
Sbjct: 123 RVDEAVKVFDEMLT-KGE----VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM 177

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            V TY  ++          EA  L  EM  +G+ P+V T+N++++  CK G + +A  + 
Sbjct: 178 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 237

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M + GVR    TY +L+      G+V    +LF      G +  +  Y+ LIN +  +
Sbjct: 238 ENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 297

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             I+ A  +  EM  K I PD V +NTL  GL  + +V+ A KL DEM + G+  D  TY
Sbjct: 298 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 357

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I G    G + +A+ + + +        +  YN+LI GLCK+G+ + A  + + +  
Sbjct: 358 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 417

Query: 373 GVLVPNVVTYSIMIGGLCNDGQ 394
             + P+  TY  +I GL  + +
Sbjct: 418 NGITPDDSTYISLIEGLTTEDE 439



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 166/320 (51%), Gaps = 7/320 (2%)

Query: 1   MGRVSHGFVVLGRIL-KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +GRV     V   +L K    P+AV + +LI G C + ++  A     ++   G    V 
Sbjct: 121 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 180

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY  LV+ L        A  L EEM       G    P+  TY  +I+G CKEG V KA 
Sbjct: 181 TYNLLVHALFMDGRGTEAYELVEEMG------GKGLAPDVFTYNILINGHCKEGNVKKAL 234

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+   M  + ++  VVTYTS+I          E  +LF E + +G++P++V +N +++  
Sbjct: 235 EIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 294

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
             +G +D A  ++  M +  + PD  TYNTL+ G CL GRV+ A++L   M   G +  +
Sbjct: 295 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDL 354

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+GY    +++ AL + +EM++KG  P ++ +N L  GL +  Q + A  +  E
Sbjct: 355 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 414

Query: 300 MQRNGVAADTWTYRTFIDGL 319
           M  NG+  D  TY + I+GL
Sbjct: 415 MVENGITPDDSTYISLIEGL 434



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 41/146 (28%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++G + K    PD VT+ +L++GLC   R+ EA  L  ++   G +PD+ TY
Sbjct: 298 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 357

Query: 62  TTLV-----------------------------------NGLCRTSHTIVALNLFEEMAN 86
            TL+                                    GLC+      A N+ +EM  
Sbjct: 358 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV- 416

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKE 112
              E G+   P+  TY ++I+GL  E
Sbjct: 417 ---ENGIT--PDDSTYISLIEGLTTE 437


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 225/470 (47%), Gaps = 25/470 (5%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           + H    L  +++S + PDA TF SLI G C   ++  A  LF K+   G   D  +Y  
Sbjct: 145 LRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAA 204

Query: 64  LVNGLCRTSHTIVALNLFEEMAN----------------GNGEFGVV---------CEPN 98
           L+ G C       AL LF EM                  G GE G+            P 
Sbjct: 205 LIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPT 264

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
           T  Y  ++D  C+E   ++A+++L +M D  + P VVT T V+  +C     + A R+F 
Sbjct: 265 TRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFE 324

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            M  +G +PNV T+N I+   C  GK+ +A  LLD M + GV PD  TYN L+ G C+ G
Sbjct: 325 SMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDG 384

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            +  A  L   ME  G     ++Y++LI+  CK  +++ A SL+  +  +GI+P+ V  N
Sbjct: 385 HIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFN 444

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           T+  GL +  + + A    + M   G A DT+TY  FI+ LCK     E +     +   
Sbjct: 445 TVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQK 504

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             +     Y  +I+ L       +A  ++  +      P+VVTY+  +   CN+G++D+A
Sbjct: 505 DVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEA 564

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            ++  +M++   + + + ++ LI G   I +  + + +L  M  +  MP+
Sbjct: 565 ENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPN 614



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 208/403 (51%), Gaps = 12/403 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P   T+ +LI+ LC  + +  A    + +   G  PD FT+ +L+ G CRT    VA +
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185

Query: 80  LFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           LF +M   G  +       + V+Y  +I+G C+ G +D+A EL  +M     +P++ T+ 
Sbjct: 186 LFCKMPFRGFSQ-------DAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHA 234

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++++G C A    E   +  +M + G +P    +  ++D  C+  K +EA ++L+ M   
Sbjct: 235 ALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDS 294

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P   T   +++ +C  GR++ A  +F SM   GC+  V++Y+ ++ G+C   ++  A
Sbjct: 295 GLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKA 354

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           ++L  +M   G++PDVV +N L  G      +  AF+L   M+ NG+AAD +TY   ID 
Sbjct: 355 MALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDA 414

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G + EA  LF  L       +   +N++I+GLCK+G+ ++A     ++      P+
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPD 474

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             TYS  I  LC      +      +M +  V P+ + + ++I
Sbjct: 475 TYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVI 517



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 223/476 (46%), Gaps = 22/476 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +L ++ +  + P    + +L+   C E +  EA  +  ++   G  P V T 
Sbjct: 244 GRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTC 303

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +VN  CR      A+ +FE M          CEPN  TY  I+ G C  G V KA  L
Sbjct: 304 TIVVNAYCREGRMSGAVRVFESMRFKG------CEPNVWTYNAIVQGFCNAGKVYKAMAL 357

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM++  ++P+VVTY  +IRG C       A RL   M   G+  +  T+NV++D LCK
Sbjct: 358 LDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCK 417

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+DEA  L D +   G+RP++ T+NT+++G C  G+ + A     +M S G     ++
Sbjct: 418 TGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYT 477

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS  I   CK K  +  L    EML K +KP  V +  +   LF       A +++ +M 
Sbjct: 478 YSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMV 537

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G + D  TY T +   C  G + EA  +   ++  +   D  AYN+LIDG    G+ +
Sbjct: 538 SQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTD 597

Query: 362 IALELFRSLPCGVLVPNVVTYSIM----------------IGGLCNDGQMDKARDLFLDM 405
            A+ + + +     +PN  T+ I+                   +    ++    +LF  M
Sbjct: 598 RAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELM 657

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++N+V  +  T+  ++ GF       +V  L+  MKE N+  +  I + +V+   K
Sbjct: 658 KKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCK 713



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 200/439 (45%), Gaps = 16/439 (3%)

Query: 49  LRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG 108
           LR F   P    + +L+    R + T + L LF  M            P   TY  +I  
Sbjct: 88  LRPFFDRP----FRSLLTHFSRYALTPLMLRLFAHMYRHAPP-----APTGATYNALIRA 138

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           LC+   +  A+  L  M     +P+  T+ S+I G+C  +    A  LF +M  +G   +
Sbjct: 139 LCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQD 198

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
            V++  +++  C+ G++DEA  L   M Q    PD +T+  L+ G C  GR      +  
Sbjct: 199 AVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQ 254

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M+ +G + T  +Y+ L++ +C+ ++ E A  + +EM   G+ P VV    +        
Sbjct: 255 KMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREG 314

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           ++  A ++F+ M+  G   + WTY   + G C  G + +A+ L   +R    E D+  YN
Sbjct: 315 RMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYN 374

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            LI G C  G +  A  L R +    L  +  TY+++I  LC  G++D+A  LF  +E  
Sbjct: 375 LLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR 434

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
            + PN +TF+ +I G  +  +       L  M      PD    S  ++ L K + S   
Sbjct: 435 GIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEG 494

Query: 469 LPSFTVHEQ-QEEVDESNV 486
           L  F + E  Q++V  S V
Sbjct: 495 L--FFIDEMLQKDVKPSTV 511



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 188/404 (46%), Gaps = 10/404 (2%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P   TY  L+  LCR +    A      M            P+  T+ ++I G C+   +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWR------PDAFTFNSLILGYCRTQQL 180

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           + A +L  +M  +    + V+Y ++I GFC A   +EA  LF EM     QP++ T   +
Sbjct: 181 EVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAAL 236

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC  G+ +E   +L  M + G RP    Y  L+D +C   +   A+++   M   G 
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL 296

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V + +I++N YC+   + GA+ ++  M  KG +P+V  +N +  G     +V +A  
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMA 356

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L D+M+  GV  D  TY   I G C +G+I  A  L   +       D   YN LID LC
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K+G+++ A  LF  L    + PN VT++ +I GLC  G+ D A     +M      P+  
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTY 476

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           T+   I    +     + +  + +M + +V P     +IV++ L
Sbjct: 477 TYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRL 520



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 224/540 (41%), Gaps = 92/540 (17%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +  S   P  VT T ++   C E R+  A  +F  +R  GCEP+V+TY  +V G C
Sbjct: 287 ILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFC 346

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  A+ L ++M     E GV  EP+ VTY  +I G C +G +  A  LL  M+   
Sbjct: 347 NAGKVYKAMALLDQMR----ECGV--EPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNG 400

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +  +  TY  +I   C     +EA  LF  +  +G++PN VTFN +++ LCK GK D A 
Sbjct: 401 LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVAC 460

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLT--------------------GRVNH------- 222
             L+ MI  G  PD +TY+  ++  C T                      VN+       
Sbjct: 461 TFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRL 520

Query: 223 --------AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
                   A  ++  M S GC   V +Y+  +  YC    ++ A ++ +EM       D 
Sbjct: 521 FNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDA 580

Query: 275 VIHNTLFVGLFEIHQVERA----------------------------------------- 293
           + +NTL  G   I Q +RA                                         
Sbjct: 581 MAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATS 640

Query: 294 ----------FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                     F+LF+ M++N V +   TY + ++G  +   + E   L   ++      +
Sbjct: 641 VWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLN 700

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              YN+L++  CK      A  L  S+     +PN++ Y  ++ GL  +GQ D+A+++F 
Sbjct: 701 EDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFR 760

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
                    + I + ++I GFIR        +++  ++++   P     +++ + L   E
Sbjct: 761 SSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEELPTRE 820


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 228/443 (51%), Gaps = 7/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V++TS++  LC   R+ EA  LF ++      P  + Y T++ G         A  L
Sbjct: 279 PDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKL 338

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E +     E G  C P+ V++ +I+  L K+  VD+A  L   MK K+ KPN+ TY  +
Sbjct: 339 LERLR----ERG--CIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNII 391

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C A   NEA ++  EM   G+ PN+++ N+++D LCK  +++EA R+ +   + G 
Sbjct: 392 IDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGC 451

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P++ TY +L+DG    G+++ A  LF  M   G       Y+ LI  +  +   E    
Sbjct: 452 NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHK 511

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +Y EM+ +G +PD+ + NT    +F+  +VE+   +F++M+  G   D  +Y   I GL 
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G   E   +F  +       D RAYN+++DGLCKSG+++ A E+   +    + P V 
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVA 631

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY  ++ GL    ++D+A  LF + +   +  NVI +  LI GF ++    +   +L +M
Sbjct: 632 TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
            +  + P+    + ++D L K E
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTE 714



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 244/509 (47%), Gaps = 60/509 (11%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++K    P+  T+  +I  LC   R+ EA  +  ++ + G  P++ +   +V+ LC+ + 
Sbjct: 376 VMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQ 435

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  +FE  A+  G     C PN+VTY ++IDGL K+G +D A  L  +M D     N
Sbjct: 436 LEEAHRIFES-ASERG-----CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDAN 489

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD---------------- 177
            + YTS+IR F       +  +++ EM+ +G +P++   N  MD                
Sbjct: 490 PIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFE 549

Query: 178 -------------------ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
                               L K G+  E S +   M Q G   DA  YN ++DG C +G
Sbjct: 550 DMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSG 609

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           +V+ A E+   M+      TV +Y  +++G  K   ++ A  L+ E  SKGI+ +V++++
Sbjct: 610 KVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYS 669

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           +L  G  ++ +++ A+ + +EM + G+  + +T+ + +D L K   I EA+  F +++ +
Sbjct: 670 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEM 729

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
           KC  +   Y+ LI+GLC+  +   A   ++ +    L+PNVVTY+ MI GL   G +  A
Sbjct: 730 KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDA 789

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV-------------------IELLHK 439
             LF   + N  +P+  +F+ LI G    N P +                    I LL  
Sbjct: 790 YSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDA 849

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNS 468
           + +   +  A+IV  V+  +AK++ +  S
Sbjct: 850 LNKTECLEQAAIVGAVLSEIAKSQHAYRS 878



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 195/362 (53%), Gaps = 6/362 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +   +++    PD     + +  +     + +  A+F  ++ FG  PDV +Y
Sbjct: 504 GRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSY 563

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +        N+F+ M+     F +    +   Y  ++DGLCK G VDKA E+
Sbjct: 564 SILIHGLTKAGQARETSNIFQAMSQQG--FAL----DARAYNAVVDGLCKSGKVDKAYEV 617

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK K++ P V TY S++ G       +EA  LF E   +G++ NV+ ++ ++D   K
Sbjct: 618 LEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGK 677

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA  +L+ M++ G+ P+ +T+N+L+D    T  ++ A   F SM+ M C    ++
Sbjct: 678 VGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYT 737

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILING C+ ++   A   + EM  +G+ P+VV + T+  GL ++  +  A+ LF+  +
Sbjct: 738 YSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFK 797

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   D+ ++   I+G+      +EA ++F   R+  C  +++   SL+D L K+  LE
Sbjct: 798 TNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLE 857

Query: 362 IA 363
            A
Sbjct: 858 QA 859



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 231/495 (46%), Gaps = 42/495 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     + G++      P A  + ++I G  +  R  +A  L  +LR  GC P V ++
Sbjct: 295 GRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSF 354

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++  L +      AL LF+ M           +PN  TY  IID LC  G V++A ++
Sbjct: 355 NSILTCLGKKRKVDEALTLFDVMKKD-------AKPNISTYNIIIDMLCMAGRVNEAYKI 407

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+   + PN+++   ++   C A    EA R+F    ++G  PN VT+  ++D L K
Sbjct: 408 RDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGK 467

Query: 182 NGKMDEASRLLDLM-----------------------------------IQHGVRPDAFT 206
            GK+D+A RL + M                                   I+ G RPD   
Sbjct: 468 KGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTL 527

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
            NT +D     G V   + +F  M+S G    V SYSILI+G  K  +     +++  M 
Sbjct: 528 LNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMS 587

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +G   D   +N +  GL +  +V++A+++ +EM+   V     TY + +DGL K   + 
Sbjct: 588 QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD 647

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA  LF   +    E ++  Y+SLIDG  K GR++ A  +   +    L PNV T++ ++
Sbjct: 648 EAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L    ++D+A   F  M+E    PN  T+ +LI G  R+ + +K      +M++  ++
Sbjct: 708 DALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLI 767

Query: 447 PDASIVSIVVDLLAK 461
           P+    + ++  LAK
Sbjct: 768 PNVVTYTTMISGLAK 782



 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 237/489 (48%), Gaps = 32/489 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R+   F V+G +    F P    +T LI G  AE+R  E A  L  +++  G E  V  +
Sbjct: 156 RLEDAFRVIGAMRHLKFRPPFSAYTVLI-GALAEARQPERALELLRQMQDVGYEVSVPLF 214

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV--------------------------- 94
           TTLV  L R      AL L +E+     E  +V                           
Sbjct: 215 TTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKA 274

Query: 95  --CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P+ V+YT+++  LCK G + +A+EL  QM+ +   P    Y ++I G+  A+ +++
Sbjct: 275 HGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDD 334

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A +L   + ++G  P+VV+FN I+  L K  K+DEA  L D+M +   +P+  TYN ++D
Sbjct: 335 AYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIID 393

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C+ GRVN A ++   ME  G    + S +I+++  CK  ++E A  ++     +G  P
Sbjct: 394 MLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNP 453

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           + V + +L  GL +  +++ A++LF++M   G  A+   Y + I     +G   +  +++
Sbjct: 454 NSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIY 513

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +       D+   N+ +D + K+G +E    +F  +     +P+V +YSI+I GL   
Sbjct: 514 KEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKA 573

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           GQ  +  ++F  M +     +   ++ ++ G  +  +  K  E+L +MK  +V P  +  
Sbjct: 574 GQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATY 633

Query: 453 SIVVDLLAK 461
             +VD LAK
Sbjct: 634 GSIVDGLAK 642



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 172/371 (46%), Gaps = 10/371 (2%)

Query: 72  SHTIVAL-NLFEEMAN-GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           SH + AL  + EEM++ G G     C         ++  L +   ++ A  ++  M+   
Sbjct: 119 SHDLAALEKVLEEMSHLGYGLPNPAC-------AALVATLVRSRRLEDAFRVIGAMRHLK 171

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +P    YT +I     A+    A  L  +M D G + +V  F  ++  L + G+M+ A 
Sbjct: 172 FRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPAL 231

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L+D +    + PD   YN  +D F   G V+ A + F  +++ G +    SY+ ++   
Sbjct: 232 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVL 291

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK   +  A  L+ +M ++   P    +NT+ +G     + + A+KL + ++  G     
Sbjct: 292 CKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSV 351

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            ++ + +  L K   + EA+ LF  ++    + +I  YN +ID LC +GR+  A ++   
Sbjct: 352 VSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDE 410

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    L PN+++ +IM+  LC   Q+++A  +F    E    PN +T+  LI G  +  +
Sbjct: 411 MELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGK 470

Query: 430 PSKVIELLHKM 440
                 L  KM
Sbjct: 471 IDDAYRLFEKM 481



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   +++L  ++K   TP+  T+ SL+  L     I EA   F  ++   C P+ +T
Sbjct: 678 VGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYT 737

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+NGLCR      A   ++EM       G++  PN VTYTT+I GL K G +  A  
Sbjct: 738 YSILINGLCRVQKYNKAFVFWQEMQKQ----GLI--PNVVTYTTMISGLAKVGNITDAYS 791

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + K     P+  ++ ++I G   A    EA ++F E   +G + NV T   ++D L 
Sbjct: 792 LFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALN 851

Query: 181 KNGKMDEAS 189
           K   +++A+
Sbjct: 852 KTECLEQAA 860



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 4/276 (1%)

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PDA  YN +L    L+  +   +++   M  +G      + + L+    +++ +E A  +
Sbjct: 108 PDA--YNAVLP--FLSHDLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRV 163

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              M     +P    +  L   L E  Q ERA +L  +MQ  G       + T +  L +
Sbjct: 164 IGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAR 223

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G +  A+ L   ++    E DI  YN  ID   K+G +++A + F  L    L P+ V+
Sbjct: 224 EGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVS 283

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ M+  LC  G++ +A +LF  ME    VP    ++ +I G+          +LL +++
Sbjct: 284 YTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLR 343

Query: 442 EINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           E   +P     + ++  L K      +L  F V ++
Sbjct: 344 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK 379


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/370 (35%), Positives = 201/370 (54%), Gaps = 9/370 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F   A++   ++  L  E RI    +++ ++       +V T+  ++NGLC+      A 
Sbjct: 190 FRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAG 249

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++ E+M      +G    P+ +TY TIIDG CK G + KA  LL +M  K I PN +T+ 
Sbjct: 250 DVVEDMK----AWGF--SPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFN 303

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I GFC  ++   AK++F EM  QG+QPNVVT+N +++ LC NGK+DEA  L D M   
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G++P+  TYN L++GFC    +  A+E+   +   G    V +++ LI+ Y K   ++ A
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L S ML  G+ P+V  +N L VG      V+ A KL  EM+ NG+ AD  TY   +D 
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483

Query: 319 LCKNGYIVEAVELFHTLRILKCE---FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           LCK G   +AV L   + +++ +    +I  YN LI G C  G+LE A  L   +    L
Sbjct: 484 LCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 543

Query: 376 VPNVVTYSIM 385
           +PN  TY I+
Sbjct: 544 IPNRTTYDIL 553



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 187/336 (55%), Gaps = 8/336 (2%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N VT+  +I+GLCK G   KA +++  MK     P+V+TY ++I G+C A    +A  L 
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM+ + + PN +TFN+++D  C++  +  A ++ + M + G++P+  TYN+L++G C  
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G+++ A  L   M  MG K  V +Y+ LING+CK K ++ A  +  ++  +G+ P+V+  
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           NTL     +  +++ AF L   M   GV  +  TY   I G C+ G + EA +L   +  
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC---GVLVPNVVTYSIMIGGLCNDGQ 394
              + D+  YN L+D LCK G    A+ L   +          N+VTY+++I G CN G+
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGK 527

Query: 395 MDKARDLFLDMEENAVVPNVITFD-----MLIRGFI 425
           +++A  L  +M E  ++PN  T+D     M+ +GFI
Sbjct: 528 LEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 213/417 (51%), Gaps = 20/417 (4%)

Query: 49  LRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFG-----VVCEPNTVTYT 103
           L  +GC   +     LV    +     +AL  F+      G++G     + C P  V+  
Sbjct: 151 LGSWGCANSIIV-DMLVWAYVKNGEMDLALEGFDRA----GDYGFRLSALSCNPMLVS-- 203

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
                L KEG +   + +  +M  + I  NVVT+  VI G C    + +A  +  +M   
Sbjct: 204 -----LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW 258

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G  P+V+T+N I+D  CK GKM +A  LL  M+   + P+  T+N L+DGFC    V  A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           K++F  M+  G +  V +Y+ LING C N +++ AL L  +M   G+KP+VV +N L  G
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
             +   ++ A ++ D++ + G+A +  T+ T ID   K G + +A  L   +       +
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  YN LI G C+ G ++ A +L + +    L  ++VTY+I++  LC  G+  KA  L  
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLD 498

Query: 404 DM---EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +M   E+     N++T+++LI+GF    +  +   LL++M E  ++P+ +   I+ D
Sbjct: 499 EMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 555



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 175/337 (51%), Gaps = 9/337 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     V   +++     + VTF  +I GLC   +  +A  +   ++ +G  P V TY
Sbjct: 208 GRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITY 267

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G C+      A  L +EM            PN +T+  +IDG C++  V  AK++
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMV------AKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+ + ++PNVVTY S+I G C     +EA  L  +M   G++PNVVT+N +++  CK
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + EA  +LD + + G+ P+  T+NTL+D +   GR++ A  L   M   G    V +
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE-- 299
           Y+ LI G+C+   ++ A  L  EM   G+K D+V +N L   L +  +  +A +L DE  
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMT 501

Query: 300 -MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            M++ G  A+  TY   I G C  G + EA  L + +
Sbjct: 502 LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 538



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 153/282 (54%), Gaps = 9/282 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  ++     P+ +TF  LI G C +  +  A  +F +++  G +P+V TY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC       AL L ++M+      G+  +PN VTY  +I+G CK+  + +A+E+
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMS------GMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  +  + + PNV+T+ ++I  +  A   ++A  L   M+D GV PNV T+N ++   C+
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF---VSMESMGCKHT 238
            G + EA +L   M  +G++ D  TYN L+D  C  G    A  L      ME  G +  
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRAN 511

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + +Y++LI G+C   ++E A  L +EML KG+ P+   ++ L
Sbjct: 512 IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 160/305 (52%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F    D G + + ++ N ++  L K G++     +   MI+  +  +  T++ +++G C 
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCK 241

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G+   A ++   M++ G   +V +Y+ +I+GYCK  ++  A +L  EM++K I P+ + 
Sbjct: 242 VGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            N L  G      V  A K+F+EMQR G+  +  TY + I+GLC NG + EA+ L   + 
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
            +  + ++  YN+LI+G CK   L+ A E+   +    L PNV+T++ +I      G+MD
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L   M +  V PNV T++ LI GF R     +  +L  +M+   +  D    +I+V
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481

Query: 457 DLLAK 461
           D L K
Sbjct: 482 DALCK 486



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 159/341 (46%), Gaps = 17/341 (4%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN-------------VIMDEL 179
           NV  +  ++     AK++N+ + L           N   F+             +I+D L
Sbjct: 106 NVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDML 165

Query: 180 C----KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
                KNG+MD A    D    +G R  A + N +L      GR+   + ++  M     
Sbjct: 166 VWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRI 225

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V ++ ++ING CK  + + A  +  +M + G  P V+ +NT+  G  +  ++ +A  
Sbjct: 226 GVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADA 285

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  EM    +  +  T+   IDG C++  +  A ++F  ++    + ++  YNSLI+GLC
Sbjct: 286 LLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLC 345

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
            +G+L+ AL L   +    L PNVVTY+ +I G C    + +AR++  D+ +  + PNVI
Sbjct: 346 SNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVI 405

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           TF+ LI  + +         L   M +  V P+ S  + ++
Sbjct: 406 TFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 118/241 (48%), Gaps = 44/241 (18%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   + +    P+ VT+ SLI GLC+  ++ EA  L  K+   G +P+V TY  L+NG C
Sbjct: 321 VFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFC 380

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +       L    EM +  G+ G+   PN +T+ T+ID   K G +D A  L   M D  
Sbjct: 381 KKK----MLKEAREMLDDIGKRGLA--PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG------ 183
           + PNV TY  +I GFC   +  EA++L  EM   G++ ++VT+N+++D LCK G      
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494

Query: 184 --------------------------------KMDEASRLLDLMIQHGVRPDAFTYNTLL 211
                                           K++EA+RLL+ M++ G+ P+  TY+ L 
Sbjct: 495 RLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR 554

Query: 212 D 212
           D
Sbjct: 555 D 555



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 61/383 (15%)

Query: 132 PNVVTY-TSVIRGFCYAKDWNEAKRLFIE---------MMDQGVQPNVVT--FNVIMDEL 179
           PN  T+ T  I      + W++ K +  E         + +   QP+++   F     E 
Sbjct: 42  PNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEF 101

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYN---TLLDGFCLTGRVNHAKELFVSME---SM 233
                +++  RLL L+       +A  YN    LLD F      +++  +F S+    S 
Sbjct: 102 GAIHNVEQFCRLLHLL------ANAKNYNKIRALLDSFAKNAHYSNS-TIFHSLSVLGSW 154

Query: 234 GCKHTVFSYSILINGYCKNKEIEGAL---------------------------------- 259
           GC +++    +L+  Y KN E++ AL                                  
Sbjct: 155 GCANSII-VDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 260 -SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            S+Y EM+ + I  +VV  + +  GL ++ + ++A  + ++M+  G +    TY T IDG
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G + +A  L   +   +   +   +N LIDG C+   +  A ++F  +    L PN
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVTY+ +I GLC++G++D+A  L   M    + PNV+T++ LI GF +     +  E+L 
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
            + +  + P+    + ++D   K
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGK 416



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 9/177 (5%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  I K    P+ +TF +LI       R+ +A  L + +   G  P+V TY  L+ G C
Sbjct: 391 MLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFC 450

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM---K 126
           R  +   A  L +EM  GNG      + + VTY  ++D LCK+G   KA  LL +M   +
Sbjct: 451 REGNVKEARKLAKEME-GNG-----LKADLVTYNILVDALCKKGETRKAVRLLDEMTLME 504

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            K  + N+VTY  +I+GFC      EA RL  EM+++G+ PN  T++++ DE+ + G
Sbjct: 505 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 23/170 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+   F++   +L +   P+  T+  LI G C E  + EA  L  ++   G + D+ TY
Sbjct: 418 GRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY 477

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA--NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
             LV+ LC+   T  A+ L +EM      G        N VTY  +I G C +G +++A 
Sbjct: 478 NILVDALCKKGETRKAVRLLDEMTLMEKKGR-----RANIVTYNVLIKGFCNKGKLEEAN 532

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
            LL +M +K + PN  TY  ++R                EMM++G  P++
Sbjct: 533 RLLNEMLEKGLIPNRTTY-DILRD---------------EMMEKGFIPDI 566


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 231/445 (51%), Gaps = 8/445 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +  ++L+    P+ +T+  L+ GLC   R+ E AA+  ++      PD FTY
Sbjct: 237 GDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTY 296

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L +G  RT  +   L+LFEE      + G        T + +++GLCK+G + KA+E+
Sbjct: 297 SILFDGHSRTGDSQTMLSLFEESVKKGVKIG------AYTCSILLNGLCKDGKISKAEEV 350

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  + +  +    V Y ++I G+C   D   A  +F +M  + ++P+ +T+N +++ L K
Sbjct: 351 LQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK 410

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ EA  L+  M ++GV P   T+NTL+D +   G++     +   M+  G K  V S
Sbjct: 411 VERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVS 470

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  ++N +CKN +I  A+++  +M  K + P   ++N +     E    ++AF L ++M+
Sbjct: 471 YGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMK 530

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +GV     TY   I GLCK   I EA EL  +LR      D+ +YN+LI   C     +
Sbjct: 531 SSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTD 590

Query: 362 IALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            ALEL + +  CG+  P+  TY ++   L   G++ +  +L+  M +  VVP    ++++
Sbjct: 591 RALELEKEMWKCGI-KPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIM 649

Query: 421 IRGFIRINEPSKVIELLHKMKEINV 445
           +  + +  E SKV  L  +M +  +
Sbjct: 650 VDAYAKCGEESKVEALRKEMSDKGI 674



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 226/466 (48%), Gaps = 48/466 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE----PDVFTYTTLVNGLCRTSHTIV 76
           PD  T+   ++       + EA  +   LR  GC+    P+ F+Y  ++ GL +      
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGM---LRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCD 206

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A+ LF+EM     E  VV  PN +TY T+IDG  K+G ++    L  QM    +KPNV+T
Sbjct: 207 AVKLFDEMP----EKAVV--PNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVIT 260

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y  ++ G C A    E   +  EM  + + P+  T++++ D   + G       L +  +
Sbjct: 261 YNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESV 320

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + GV+  A+T + LL+G C  G+++ A+E+  ++ + G   T   Y+ LINGYC+  ++E
Sbjct: 321 KKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLE 380

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
           GA S++ +M S+ I+PD + +N L  GL ++ ++  A  L  EM++NGV     T+ T I
Sbjct: 381 GAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLI 440

Query: 317 D-----------------------------------GLCKNGYIVEAVELFHTLRILKCE 341
           D                                     CKNG I+EAV +   + I    
Sbjct: 441 DAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVL 500

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
              + YN++ID   + G  + A  L   +    + P++VTY+++I GLC   Q+ +A +L
Sbjct: 501 PGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEEL 560

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
              +    + P+VI+++ LI      +   + +EL  +M +  + P
Sbjct: 561 LDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKP 606



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 185/363 (50%), Gaps = 1/363 (0%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMK-DKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
            P+T T+   +      G +D+A  +L +M  D    PN  +Y  VI G   A    +A 
Sbjct: 149 RPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAV 208

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +LF EM ++ V PN +T+N ++D   K G ++   RL   M++HG++P+  TYN LL G 
Sbjct: 209 KLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGL 268

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  GR+     +   M S       F+YSIL +G+ +  + +  LSL+ E + KG+K   
Sbjct: 269 CRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
              + L  GL +  ++ +A ++   +  +G+   T  Y T I+G C+ G +  A  +F  
Sbjct: 329 YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQ 388

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           ++      D   YN+LI+GL K  R+  A +L   +    + P+V T++ +I      GQ
Sbjct: 389 MKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           ++K   +  DM+E  + PNV+++  ++  F +  +  + + +L  M   +V+P A + + 
Sbjct: 449 LEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNA 508

Query: 455 VVD 457
           ++D
Sbjct: 509 IID 511



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 176/349 (50%), Gaps = 4/349 (1%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM-MDQGVQPNVVTFN 173
           V  A ELL+  +    +P+  T+   ++    A D +EA  +   M  D    PN  ++N
Sbjct: 136 VRGAFELLVAAR---ARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYN 192

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           V++  L K G   +A +L D M +  V P+  TYNT++DG    G +     L+  M   
Sbjct: 193 VVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRH 252

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           G K  V +Y++L++G C+   +    ++  EM S+ + PD   ++ LF G       +  
Sbjct: 253 GLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTM 312

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             LF+E  + GV    +T    ++GLCK+G I +A E+  TL           YN+LI+G
Sbjct: 313 LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLING 372

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            C+ G LE A  +F+ +   ++ P+ +TY+ +I GL    ++ +A DL ++ME+N V P+
Sbjct: 373 YCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPS 432

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           V TF+ LI  + R  +  K   +L  M+E  + P+      +V+   KN
Sbjct: 433 VETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKN 481



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 148/314 (47%), Gaps = 6/314 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F +  ++      PD +T+ +LI GL    RI EA  L  ++   G  P V T
Sbjct: 376 IGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVET 435

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + TL++   R         +  +M     E G+  +PN V+Y +I++  CK G + +A  
Sbjct: 436 FNTLIDAYGRAGQLEKCFIILSDMQ----EKGL--KPNVVSYGSIVNAFCKNGKILEAVA 489

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  M  K++ P    Y ++I  +      ++A  L  +M   GV P++VT+N+++  LC
Sbjct: 490 ILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLC 549

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++ EA  LLD +  +G+ PD  +YNTL+   C     + A EL   M   G K +  
Sbjct: 550 KQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPR 609

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y +L +       +    +LY +ML K + P   I+N +     +  +  +   L  EM
Sbjct: 610 TYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEM 669

Query: 301 QRNGVAADTWTYRT 314
              G+A   +T  T
Sbjct: 670 SDKGIAVGDYTSMT 683



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 139/286 (48%), Gaps = 9/286 (3%)

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT---- 238
           G+  +     +L++    RPD FT+N  +    + G ++ A  +   +  MGC       
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGM---LRRMGCDGAPAPN 187

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            FSY+++I G  K      A+ L+ EM  K + P+ + +NT+  G  +   +E  F+L+ 
Sbjct: 188 AFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWS 247

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M R+G+  +  TY   + GLC+ G + E   +   +   K   D   Y+ L DG  ++G
Sbjct: 248 QMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTG 307

Query: 359 RLEIALELFR-SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
             +  L LF  S+  GV +    T SI++ GLC DG++ KA ++   +  + ++   + +
Sbjct: 308 DSQTMLSLFEESVKKGVKI-GAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIY 366

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + LI G+ +I +      +  +MK   + PD    + +++ L K E
Sbjct: 367 NTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVE 412


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 216/423 (51%), Gaps = 6/423 (1%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G +  G ++LG +  + F P  VT+ SLI  L  +  + +  +LF ++R  G  P+V  Y
Sbjct: 1027 GDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIY 1086

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++++ LC       A+ + ++M      F   C+P+ +T+ T+I GLC EG V KA+  
Sbjct: 1087 NSVIDALCNCRSATQAMVILKQM------FASGCDPDIITFNTLITGLCHEGHVRKAEHF 1140

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L +   + + PN ++YT +I GFC   +   A  L +EMM +G  P+VVTF  ++  L  
Sbjct: 1141 LREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVV 1200

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             GK+ EA  + + M +  V PD   YN L+ G C    +  AK +   M     +   F 
Sbjct: 1201 AGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFV 1260

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            Y+ LI+G+ +++ +  A  ++  M  KG+ PD+V  N +  G  +   +  A      M+
Sbjct: 1261 YATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 1320

Query: 302  RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            + G   D +TY T I G  K G +  A+     +   KC+ ++  Y+SLI+G CK+G  +
Sbjct: 1321 KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTD 1380

Query: 362  IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             A  LF ++    L PNVVTY+I+IG L    ++ +A   F  M  N   PN +T   L+
Sbjct: 1381 SAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLV 1440

Query: 422  RGF 424
             G 
Sbjct: 1441 NGL 1443



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 209/440 (47%), Gaps = 6/440 (1%)

Query: 29   LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
            L++GLC E R+ E   L       GC P V  Y  L++G CR       L L  EM   N
Sbjct: 984  LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMET-N 1042

Query: 89   GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
            G       P  VTY ++I+ L K+G ++K   L L+M+ +   PNV  Y SVI   C  +
Sbjct: 1043 GFL-----PTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCR 1097

Query: 149  DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
               +A  +  +M   G  P+++TFN ++  LC  G + +A   L   I+  + P+  +Y 
Sbjct: 1098 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 1157

Query: 209  TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
             L+ GFC+ G +  A +L V M   G    V ++  LI+G     ++  AL +  +M  +
Sbjct: 1158 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 1217

Query: 269  GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
             + PDV I+N L  GL +   +  A  + +EM    V  D + Y T IDG  ++  + +A
Sbjct: 1218 QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 1277

Query: 329  VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
             ++F  +       DI + N++I G C+ G +  A+    ++     +P+  TY+ +I G
Sbjct: 1278 RKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1337

Query: 389  LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
                G ++ A     DM +    PNV+T+  LI G+ +  +      L   M+   + P+
Sbjct: 1338 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPN 1397

Query: 449  ASIVSIVVDLLAKNEISLNS 468
                +I++  L K +  L +
Sbjct: 1398 VVTYTILIGSLFKKDKVLRA 1417



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 204/436 (46%), Gaps = 46/436 (10%)

Query: 4    VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
             +   V+L ++  S   PD +TF +LI GLC E  + +A     +       P+  +YT 
Sbjct: 1099 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 1158

Query: 64   LVNGLCRTSHTIVALNLFEEMANGNGE------FGVVCE--------------------- 96
            L++G C     +VA +L  EM  G G       FG +                       
Sbjct: 1159 LIHGFCMRGELMVASDLLVEMM-GRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 1217

Query: 97   ---PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
               P+   Y  +I GLCK+  +  AK +L +M +KN++P+   Y ++I GF  +++  +A
Sbjct: 1218 QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 1277

Query: 154  KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            +++F  M  +GV P++V+ N ++   C+ G M EA   +  M + G  PD FTY T++ G
Sbjct: 1278 RKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1337

Query: 214  FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            +   G +N A      M    CK  V +YS LINGYCK  + + A  L++ M ++ + P+
Sbjct: 1338 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPN 1397

Query: 274  VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK------NGYIVE 327
            VV +  L   LF+  +V RA   F+ M  N  + +  T    ++GL        N     
Sbjct: 1398 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCN 1457

Query: 328  AVELFHTLRIL----KCEFDI-----RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
              E+     +L    K  FDI      AYN++I  LC+   L  AL+    +     VPN
Sbjct: 1458 TSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN 1517

Query: 379  VVTYSIMIGGLCNDGQ 394
             +T+  ++ G C+ G+
Sbjct: 1518 PITFLSLLYGFCSVGK 1533



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 192/437 (43%), Gaps = 6/437 (1%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            P+      L+K L  + R  +A  L+ ++       D ++   LV GLC        L L
Sbjct: 941  PEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKL 1000

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             E        +G  C P+ V Y  +IDG C+ G + +   LL +M+     P +VTY S+
Sbjct: 1001 IE------ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSL 1054

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
            I       D  +   LF+EM  +G  PNV  +N ++D LC      +A  +L  M   G 
Sbjct: 1055 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGC 1114

Query: 201  RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             PD  T+NTL+ G C  G V  A+                SY+ LI+G+C   E+  A  
Sbjct: 1115 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASD 1174

Query: 261  LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            L  EM+ +G  PDVV    L  GL    +V  A  + ++M    V  D   Y   I GLC
Sbjct: 1175 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 1234

Query: 321  KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            K   +  A  +   +     + D   Y +LIDG  +S  L  A ++F  +    + P++V
Sbjct: 1235 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIV 1294

Query: 381  TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            + + MI G C  G M +A     +M +   +P+  T+  +I G+ +    +  +  L  M
Sbjct: 1295 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 1354

Query: 441  KEINVMPDASIVSIVVD 457
             +    P+    S +++
Sbjct: 1355 IKRKCKPNVVTYSSLIN 1371



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 186/394 (47%), Gaps = 9/394 (2%)

Query: 96   EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
            +P  + ++T++  L +    D   + L  M      P      +++  +  A    +A  
Sbjct: 869  DPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATE 928

Query: 156  LFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            +   + +Q G  P V   N ++  L +  + D+A +L D M+      D ++   L+ G 
Sbjct: 929  MCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGL 988

Query: 215  CLTGRVNHAKELFVSMESMGC-KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            CL  RV    +L  +    GC  H VF Y++LI+GYC+  ++   L L  EM + G  P 
Sbjct: 989  CLERRVEEGLKLIEARWGAGCIPHVVF-YNVLIDGYCRRGDMGRGLLLLGEMETNGFLPT 1047

Query: 274  VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            +V + +L   L +   +E+   LF EM++ G + +   Y + ID LC      +A+ +  
Sbjct: 1048 LVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILK 1107

Query: 334  TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
             +    C+ DI  +N+LI GLC  G +  A    R      L PN ++Y+ +I G C  G
Sbjct: 1108 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 1167

Query: 394  QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            ++  A DL ++M      P+V+TF  LI G +   + S+ + +  KM E  V PD +I +
Sbjct: 1168 ELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 1227

Query: 454  IVVDLLAKNEISLNSLPSFTVHEQQEEVDESNVK 487
            +++  L K  +    LP+       EE+ E NV+
Sbjct: 1228 VLISGLCKKRM----LPA--AKNILEEMLEKNVQ 1255



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 172/368 (46%), Gaps = 1/368 (0%)

Query: 97   PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKR 155
            P       ++      G + KA E+  +++++    P V     +++     + W++A++
Sbjct: 905  PTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 964

Query: 156  LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
            L+ EM+ +    +  +  V++  LC   +++E  +L++     G  P    YN L+DG+C
Sbjct: 965  LYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 1024

Query: 216  LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
              G +     L   ME+ G   T+ +Y  LIN   K  ++E   SL+ EM  +G  P+V 
Sbjct: 1025 RRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1084

Query: 276  IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            I+N++   L       +A  +  +M  +G   D  T+ T I GLC  G++ +A       
Sbjct: 1085 IYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1144

Query: 336  RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               +   +  +Y  LI G C  G L +A +L   +      P+VVT+  +I GL   G++
Sbjct: 1145 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1204

Query: 396  DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
             +A  +   M E  V P+V  +++LI G  +         +L +M E NV PD  + + +
Sbjct: 1205 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1264

Query: 456  VDLLAKNE 463
            +D   ++E
Sbjct: 1265 IDGFIRSE 1272


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 241/507 (47%), Gaps = 66/507 (13%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL   +K    P+  +F  LI G C ES++ +A     K+  FGC PD  +Y T+++ L 
Sbjct: 200 VLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALL 259

Query: 70  RTSHTIVALNLFEEMAN---------------GNGEFGVVCE--------------PNTV 100
           +      A +L  +M +               G    G++ E              P   
Sbjct: 260 KRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVW 319

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  +++G C +G +D+A  +  +M+  N+ P+VVTY ++I G    +D +E   L  EM
Sbjct: 320 TYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
             +GV+ N VT+N+I+  +CK G M EA+  LD M ++G+ PD  TYNTL+  +C  G++
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439

Query: 221 NHAKELFVSMESMGCKHTVF-----------------------------------SYSIL 245
             A  +   M S G K   +                                   SY IL
Sbjct: 440 GKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGIL 499

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I GY K+++ + AL+L+ EM  + I P  + +N++  GL +  +V++A    +EM  NG+
Sbjct: 500 ILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGL 559

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC-EFDIRAYNSLIDGLCKSGRLEIAL 364
             D  TY   I G C  G + +A + FH   I    + D+   N L+ GLC+ G LE AL
Sbjct: 560 VPDETTYNIIIHGFCLEGNVEKAFQ-FHNEMIENLFKPDVYTCNILLRGLCREGMLEKAL 618

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +LF +L       +VVTY+ +I  LC +G+ + A DL  +ME   + P+  T+ ++I   
Sbjct: 619 KLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678

Query: 425 IRINEPSKVIELLHKMKEINVMPDASI 451
                  +  E   KM E  ++ D ++
Sbjct: 679 TDAGRIKEAEEFTLKMVESGIVHDQNL 705



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 227/450 (50%), Gaps = 9/450 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           +  ++ +  + P+ +T  +L+  L    + S I+ A  +       G  P+  ++  L+ 
Sbjct: 162 IFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIY 221

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G C  S    AL+   +M+    EFG  C P+TV+Y TI+D L K   + +A++LLL MK
Sbjct: 222 GYCLESKVKDALDWVNKMS----EFG--CVPDTVSYNTILDALLKRRLLQEARDLLLDMK 275

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            K + PN  TY  ++ G+C      EA ++   M    + P V T+N++++  C +GK+D
Sbjct: 276 SKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKID 335

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA R+ D M +  V PD  TYNTL+DG       +    L   M+  G K    +Y+I++
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
              CK   +  A +   +M   G+ PD V +NTL     +  ++ +AF++ DEM   G+ 
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            DTWT  T +  LC    + EA  L  +        D  +Y  LI G  K  + + AL L
Sbjct: 456 IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNL 515

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           +  +    ++P+ +TY+ +IGGLC   ++D+A D   +M EN +VP+  T++++I GF  
Sbjct: 516 WDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCL 575

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVV 456
                K  +  ++M E    PD    +I++
Sbjct: 576 EGNVEKAFQFHNEMIENLFKPDVYTCNILL 605



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 220/415 (53%), Gaps = 3/415 (0%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A  +F K++     P++ T  TL+N L R   +   L L  ++   + + GVV  PNT +
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSIL-LARQVLKDSIKLGVV--PNTNS 215

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           +  +I G C E  V  A + + +M +    P+ V+Y +++      +   EA+ L ++M 
Sbjct: 216 FNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMK 275

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +G+ PN  T+N+++   C+ G + EA++++++M ++ + P  +TYN L++GFC  G+++
Sbjct: 276 SKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKID 335

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  +   ME M     V +Y+ LI+G  + ++     SL  EM  KG+K + V +N + 
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             + +   +  A    D+M+ NG++ D  TY T I   CK G + +A  +   +     +
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D    N+++  LC   +L+ A  L  S      + + V+Y I+I G   D + D+A +L
Sbjct: 456 IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNL 515

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           + +M+E  ++P+ IT++ +I G  +  +  + I+ L++M E  ++PD +  +I++
Sbjct: 516 WDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIII 570



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 213/484 (44%), Gaps = 64/484 (13%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     V+  + ++   P   T+  L+ G C + +I EA  +  ++      PDV T
Sbjct: 296 LGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVT 355

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G  +   +    +L EEM     + GV C  N VTY  I+  +CK+G + +A  
Sbjct: 356 YNTLIDGCSQWRDSSEVYSLIEEM----DKKGVKC--NAVTYNIILKWMCKKGNMTEATT 409

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +M++  + P+ VTY ++I  +C A    +A R+  EM  +G++ +  T N I+  LC
Sbjct: 410 TLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLC 469

Query: 181 KNGKMDEASRLL-----------------------------------DLMIQHGVRPDAF 205
              K+DEA  LL                                   D M +  + P   
Sbjct: 470 VEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTI 529

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN+++ G C + +V+ A +    M   G      +Y+I+I+G+C    +E A   ++EM
Sbjct: 530 TYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEM 589

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           +    KPDV   N L  GL     +E+A KLF+ +   G   D  TY T I  LCK G  
Sbjct: 590 IENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKF 649

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-----------RSLPCG- 373
             A +L   +   K   D   Y  +I  L  +GR++ A E             ++L  G 
Sbjct: 650 ENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGK 709

Query: 374 ---VLVPNV--------VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
              VL   V        + YS  I  LCN  +   A  LF+++ +  V  N  T+  L+ 
Sbjct: 710 GQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLME 769

Query: 423 GFIR 426
           G I+
Sbjct: 770 GLIK 773



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 7/277 (2%)

Query: 192 LDLMIQHGVR----PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           L  +I H  R    P     +T +  +    + + A ++F  M+ +  +  + + + L+N
Sbjct: 124 LHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMN 183

Query: 248 G---YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
               Y  +  I  A  +  + +  G+ P+    N L  G     +V+ A    ++M   G
Sbjct: 184 SLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFG 243

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              DT +Y T +D L K   + EA +L   ++      +   YN L+ G C+ G L+ A 
Sbjct: 244 CVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEAT 303

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           ++   +    L+P V TY++++ G CNDG++D+A  +  +ME+  V+P+V+T++ LI G 
Sbjct: 304 KVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGC 363

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +  + S+V  L+ +M +  V  +A   +I++  + K
Sbjct: 364 SQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCK 400



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 18/252 (7%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V      L  +L++   PD  T+  +I G C E  + +A     ++     +PDV+T  
Sbjct: 543 KVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCN 602

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+ GLCR      AL LF  + +   +  VV      TY TII  LCKEG  + A +LL
Sbjct: 603 ILLRGLCREGMLEKALKLFNTLVSKGKDIDVV------TYNTIISSLCKEGKFENAYDLL 656

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ K + P+  TY  +I     A    EA+   ++M++ G+         + D+   N
Sbjct: 657 TEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI---------VHDQ---N 704

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K+ +   +L   +       +  Y+  ++  C   +   A  LFV +   G     ++Y
Sbjct: 705 LKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTY 764

Query: 243 SILINGYCKNKE 254
             L+ G  K ++
Sbjct: 765 LNLMEGLIKRRK 776



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 30/213 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F     ++++ F PD  T   L++GLC E  + +A  LF  L   G + DV TY
Sbjct: 577 GNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTY 636

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++ LC+      A +L  EM     + G    P+  TY  II  L   G + +A+E 
Sbjct: 637 NTIISSLCKEGKFENAYDLLTEMEAK--KLG----PDQYTYKVIIAALTDAGRIKEAEEF 690

Query: 122 LLQM------KDKNIK----PNVVT-------------YTSVIRGFCYAKDWNEAKRLFI 158
            L+M       D+N+K     NV+T             Y+  I   C    + +A  LF+
Sbjct: 691 TLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFV 750

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGK-MDEASR 190
           E+  +GV  N  T+  +M+ L K  K   +ASR
Sbjct: 751 EVTKEGVALNKYTYLNLMEGLIKRRKSTSKASR 783


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/439 (31%), Positives = 219/439 (49%), Gaps = 9/439 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRV--FGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           P  VT+ +L+     E R  EA+ L  ++     GC  +  TY  +++ L R  H   A 
Sbjct: 241 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAA 300

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L + M           + ++ TY  +I  L + GFV K + L ++M+++ I P +VTY 
Sbjct: 301 KLVDSMRLSK-------KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYN 353

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I G   ++    A+  F EM   G+ P+++T+N +++  CK G + EA  LL  + + 
Sbjct: 354 AIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRA 413

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P   TYNTL+DG+C  G +  A+ L   M   GC   V +Y+IL+NG  K + +  A
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMA 473

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
              + EMLSKG++PD   +NT       +    +AF+L + M   G+  DT TY   IDG
Sbjct: 474 REFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDG 533

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G + +A +L   +     + D   Y  LI   C+ G L  A +L   +    L P+
Sbjct: 534 LCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPS 593

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VVTY+I+I   C  G +  A   F  M +  + PN IT+++LI    R           H
Sbjct: 594 VVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFH 653

Query: 439 KMKEINVMPDASIVSIVVD 457
           +M E  + P+    ++++D
Sbjct: 654 EMLERGLAPNKYTYTLLID 672



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 199/402 (49%), Gaps = 6/402 (1%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           + T+  LI  L     + +  AL  ++   G  P + TY  +++GL ++     A   F 
Sbjct: 314 SFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA 373

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           EM       G++  P+ +TY ++++G CK G + +A  LL  ++   + P V+TY ++I 
Sbjct: 374 EMR----AMGLL--PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 427

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+C      EA+RL  EM++QG  P+V T+ ++M+   K   +  A    D M+  G++P
Sbjct: 428 GYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQP 487

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D F YNT +    + G  + A +L   M   G      +Y+++I+G CK   ++ A  L 
Sbjct: 488 DCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLK 547

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            +M+S G++PD + +  L     E   +  A KL + M  +G+     TY   I   C+ 
Sbjct: 548 MKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRR 607

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G +  A   F  +  +  E +   YN LI  LC++GR  +A   F  +    L PN  TY
Sbjct: 608 GNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTY 667

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +++I G C +G    A  L+ +M +N + P+  T + L +GF
Sbjct: 668 TLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 177/353 (50%), Gaps = 7/353 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T+ S++ G C    + EA  L   LR  G  P V TY TL++G CR      A  L
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            EEM          C P+  TYT +++G  K   +  A+E   +M  K ++P+   Y + 
Sbjct: 442 KEEMVEQG------CFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTR 495

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I       D ++A +L   MM +G+ P+ VT+NVI+D LCK G + +A  L   M+  G+
Sbjct: 496 ICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGL 555

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD  TY  L+   C  G ++ A++L   M S G + +V +Y+ILI+  C+   +  A  
Sbjct: 556 QPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYG 615

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            + +ML  GI+P+ + +N L   L    +   A+  F EM   G+A + +TY   IDG C
Sbjct: 616 WFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNC 675

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + G   +A+ L+  +       D   +N+L  G  K G +  A+E   ++  G
Sbjct: 676 REGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK-GHMYHAIEYLENIVLG 727



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 153/316 (48%), Gaps = 29/316 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +LG + ++   P  +T+ +LI G C    + EA  L  ++   GC PDV TY
Sbjct: 398 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTY 457

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGE---FGV---VCE------------------- 96
           T L+NG  +  +  +A   F+EM +   +   F     +C                    
Sbjct: 458 TILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMML 517

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P+TVTY  IIDGLCK G +  AK+L ++M    ++P+ +TYT +I   C     +E
Sbjct: 518 KGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSE 577

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A++L   M+  G+QP+VVT+ +++   C+ G +  A      M+  G+ P+  TYN L+ 
Sbjct: 578 ARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 637

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C TGR   A   F  M   G     ++Y++LI+G C+      A+ LY EM   GI P
Sbjct: 638 ALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 697

Query: 273 DVVIHNTLFVGLFEIH 288
           D   HN LF G  + H
Sbjct: 698 DYCTHNALFKGFDKGH 713



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 165/334 (49%), Gaps = 3/334 (0%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+V     V+R    A  W++ + ++ EM+   ++P +VT+N ++D   K G+ DEAS
Sbjct: 204 VAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEAS 263

Query: 190 RLLDLMIQHG--VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
            LL  M   G     +  TYN ++      G + +A +L  SM  +  K + F+Y+ LI 
Sbjct: 264 MLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSKKASSFTYNPLIT 322

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
              +   ++   +L  EM ++GI P +V +N +  GL +  QVE A   F EM+  G+  
Sbjct: 323 ALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLP 382

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D  TY + ++G CK G + EA+ L   LR       +  YN+LIDG C+ G LE A  L 
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLK 442

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +      P+V TY+I++ G      +  AR+ F +M    + P+   ++  I   + +
Sbjct: 443 EEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELIL 502

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +  K  +L   M    + PD    ++++D L K
Sbjct: 503 GDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCK 536



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 137/289 (47%), Gaps = 5/289 (1%)

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
            GV P+V   N ++  L    + D+   +   M+Q  + P   TYNTLLD F   GR + 
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261

Query: 223 AKELFVSMESM--GCKHTVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNT 279
           A  L   ME+   GC     +Y+++I+   +   +E A  L   M LSK  K     +N 
Sbjct: 262 ASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK--KASSFTYNP 319

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L E   V++   L  EM+  G+     TY   I GL K+  +  A   F  +R + 
Sbjct: 320 LITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMG 379

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D+  YNS+++G CK+G L+ AL L   L    L P V+TY+ +I G C  G +++AR
Sbjct: 380 LLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEAR 439

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            L  +M E    P+V T+ +L+ G  ++       E   +M    + PD
Sbjct: 440 RLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPD 488


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 238/459 (51%), Gaps = 8/459 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+  T+  LIK  C + +  +   L T +   G  PD+ +Y TL+N L ++ + + A+ 
Sbjct: 146 SPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVE 205

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ-MKDKNIKPNVVTYT 138
           LF+EM+      GV   P+ + Y  +IDG  ++G   KA E+  + + + ++ P+V TY 
Sbjct: 206 LFDEMS----VRGV--NPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYN 259

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G C     +E+  ++  M      P++ TF+ ++  L K G  + A ++   MI+ 
Sbjct: 260 IMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIES 319

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  TYN +L G   TG++N   EL+  M    C + V SY++LI G   NK++E A
Sbjct: 320 GLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIV-SYNMLIQGLLDNKKVEQA 378

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           +  +  +  +G+K D   +  L  GL +   + +A ++ +E +  G   DT+ Y + + G
Sbjct: 379 ICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHG 438

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G + +AVEL H ++  + + +   +NSLI+G  ++ +LE A+ + R +      P 
Sbjct: 439 LCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPT 498

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           VV+Y+ +I GLC   +   A     +M E  + P++IT+ +LI G  R  +    + L H
Sbjct: 499 VVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWH 558

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           +     + PD  + +I++  L   +    +L  FT   Q
Sbjct: 559 QCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQ 597



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 246/470 (52%), Gaps = 16/470 (3%)

Query: 8   FVVLGRILKSCFT-----PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           FV    I K   T     P   T+  +I GLC   ++ E+  ++ +++     PD+FT++
Sbjct: 235 FVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFS 294

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           ++++GL +  +   A  +F+EM     E G+   P+  TY  ++ GL + G ++K  EL 
Sbjct: 295 SMIHGLSKAGNFNAAEKVFQEMI----ESGL--SPDVRTYNAMLSGLFRTGKLNKCFELW 348

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  KN   N+V+Y  +I+G    K   +A   +  + ++G++ +  T+ ++++ LCKN
Sbjct: 349 NVM-SKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKN 407

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +++A R+L+     G   D F Y++++ G C  G +  A EL   M+    K     +
Sbjct: 408 GYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVF 467

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LINGY +  ++E A+S+  EM SK   P VV +NT+  GL +  +   A+    EM  
Sbjct: 468 NSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLE 527

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  D  TY   IDGLC+   +  A+ L+H     + + D++ +N +I GLC + ++++
Sbjct: 528 EGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDV 587

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           ALE+F  +     VP++VT++ ++ GL   G   +A  ++  + E  + P++I++++  +
Sbjct: 588 ALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFK 647

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDAS----IVSIVVDLLAKNEISLNS 468
           G       S  IE L+   +  ++P+A     +V  VVD     E +LN+
Sbjct: 648 GLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLMEYALNT 697



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 217/425 (51%), Gaps = 7/425 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  R+ K+  +PD  TF+S+I GL        A  +F ++   G  PDV T
Sbjct: 268 LGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRT 327

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++GL RT        L+  M+  N      C  N V+Y  +I GL     V++A  
Sbjct: 328 YNAMLSGLFRTGKLNKCFELWNVMSKNN-----CC--NIVSYNMLIQGLLDNKKVEQAIC 380

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               + ++ +K +  TY  +I G C     N+A R+  E  ++G   +   ++ ++  LC
Sbjct: 381 YWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLC 440

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +++A  L+  M ++  + ++  +N+L++G+    ++  A  +   M+S  C  TV 
Sbjct: 441 KKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVV 500

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ +ING CK +    A     EML +G+KPD++ ++ L  GL    +V+ A  L+ + 
Sbjct: 501 SYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQC 560

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +  D   +   I GLC    +  A+E+F  +R + C  D+  +N++++GL K+G  
Sbjct: 561 INKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDC 620

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL+++  +    L P++++Y+I   GLC+  ++  A +   D  +  ++PN  T+++L
Sbjct: 621 VEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVL 680

Query: 421 IRGFI 425
           +R  +
Sbjct: 681 VRAVV 685



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 122/529 (23%), Positives = 220/529 (41%), Gaps = 90/529 (17%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           +H   V   IL+    P  V     I  L    R               C  DV    + 
Sbjct: 40  AHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRCT-------------CSEDV--ALSA 84

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           +    + S    ALNLF+ M +  G     C P   ++ ++++   +     +A+     
Sbjct: 85  IKAYAKCSMPDQALNLFQNMVDIFG-----CNPGIRSFNSMLNAFIESNQWREAELFFTY 139

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
            +   + PN+ TY  +I+  C  + + + K L   M + G+ P+++++  +++ L K+G 
Sbjct: 140 FQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGN 199

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGF------------------------------ 214
           + +A  L D M   GV PD   YN L+DGF                              
Sbjct: 200 LLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYN 259

Query: 215 ------CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
                 C  G+++ + E++  M+       +F++S +I+G  K      A  ++ EM+  
Sbjct: 260 IMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIES 319

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN------------------------- 303
           G+ PDV  +N +  GLF   ++ + F+L++ M +N                         
Sbjct: 320 GLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAI 379

Query: 304 ---------GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                    G+ AD+ TY   I+GLCKNGY+ +A+ +         + D  AY+S++ GL
Sbjct: 380 CYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGL 439

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK G LE A+EL   +       N   ++ +I G     ++++A  +  +M+     P V
Sbjct: 440 CKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTV 499

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           ++++ +I G  +    S     L +M E  + PD    S+++D L + E
Sbjct: 500 VSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGE 548



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 9/204 (4%)

Query: 275 VIHNTLFVGLFEIHQ-VERAFKLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           VI  TL + L +  +    A  +FD   Q  G A   + +   +  L     +V    + 
Sbjct: 7   VISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIV 66

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL----PCGVLVPNVVTYSIMIGG 388
             +R  +C        S I    K    + AL LF+++     C    P + +++ M+  
Sbjct: 67  DLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCN---PGIRSFNSMLNA 123

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
                Q  +A   F   +   + PN+ T+++LI+   +  +  K   LL  M E  + PD
Sbjct: 124 FIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPD 183

Query: 449 ASIVSIVVDLLAKNEISLNSLPSF 472
                 +++ LAK+   L+++  F
Sbjct: 184 ILSYGTLINALAKSGNLLDAVELF 207


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 229/460 (49%), Gaps = 12/460 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S  + +L  +         VT   ++K LC    + +A + F  +     + DV +Y
Sbjct: 18  GRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFHSVSPRS-DLDVVSY 76

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL+ GL  +    VA  LFEEM++   +         V YT II+ L K    D+A   
Sbjct: 77  TTLIMGLADSGRIDVACELFEEMSSSGSQC-------VVAYTAIINALFKAHRPDQAIAC 129

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  +   P++ T+T VI G C A   N A  +F EM  +G +P+++ +  ++D L K
Sbjct: 130 FERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSK 189

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              MDEA +LL  ++  G++P   TY + + G C  GRV  A +L   M  M C   V  
Sbjct: 190 ASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKM-CAAEVLH 248

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
              +  GY    +IE AL+L  EM+ KG+  DV  +  L  GLF + + + A ++F+ M 
Sbjct: 249 --CIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMV 306

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G   DT TY   +   CK G +  A ++   +     E +   YNSL+DG     R  
Sbjct: 307 RQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAR 366

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDML 420
            A+ ++ ++   ++ P++VTY+I++ GLC  GQ   AR +  +M E + +VP ++++  L
Sbjct: 367 EAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTL 426

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           I G  +     + I++  +M +  V+PD    + ++  LA
Sbjct: 427 IHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALA 466



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 225/471 (47%), Gaps = 75/471 (15%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V++T+LI GL    RI  A  LF ++   G +  V  YT ++N L +      A+  F
Sbjct: 72  DVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQC-VVAYTAIINALFKAHRPDQAIACF 130

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           E M          C+P+  T+T +I GLCK G +++A E+  +M  K  KP+++ YTS++
Sbjct: 131 ERMVARK------CDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLV 184

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL--------- 192
            G   A   +EA++L  E++ +G++P  VT+   +  LCKNG+++EA +L+         
Sbjct: 185 DGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAA 244

Query: 193 -----------------------DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
                                  D M++ GV  D   Y  L+ G     R + A+E+F +
Sbjct: 245 EVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEA 304

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGA------------------------------- 258
           M   GC     +Y ++++ +CK  +++ A                               
Sbjct: 305 MVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNR 364

Query: 259 ----LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYR 313
               +++YS ML K +KP +V +N L +GL ++ Q   A  +  EM +R+G+     +YR
Sbjct: 365 AREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYR 424

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T I GL K G   EA+++F  +       D  +  SLI  L  + R++ A +L R +P  
Sbjct: 425 TLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRM 484

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            + P+ + Y+ ++  LC   ++  A D+ ++M +N+ VP+  TF  +  GF
Sbjct: 485 GITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGF 535



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 198/423 (46%), Gaps = 39/423 (9%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R         R++     PD  TFT +I GLC   ++  A  +F ++   G +PD+  YT
Sbjct: 122 RPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYT 181

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +LV+GL + S    A  L +E+ +         +P  VTYT+ I GLCK G V++A +L+
Sbjct: 182 SLVDGLSKASMMDEARKLLQEIVSRG------MKPTEVTYTSFISGLCKNGRVEEAGKLV 235

Query: 123 LQM----------------------------KDKNIKPNVV----TYTSVIRGFCYAKDW 150
            +M                            KD+ +K  V      YT++I G  Y +  
Sbjct: 236 REMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRN 295

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           +EA+ +F  M+ QG  P+  T+ +I+   CK GKM  A +++++M   G+  +   YN+L
Sbjct: 296 DEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSL 355

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-G 269
           +DGF    R   A  ++ +M     K ++ +Y+IL+ G CK  +   A  +  EM  + G
Sbjct: 356 MDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDG 415

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           I P +V + TL  GL +  + + A  +F EM  NGV  D  +  + I  L     + EA 
Sbjct: 416 IVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEAT 475

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           +L   +  +    D  AYN+L+  LC   ++  A ++   +     VP+  T+  M  G 
Sbjct: 476 QLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGF 535

Query: 390 CND 392
             D
Sbjct: 536 KAD 538



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 195/424 (45%), Gaps = 13/424 (3%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           DV +Y  ++ GLC       A  L +EM       G+  + + VT+  I+  LC+   VD
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEME----ALGI--KKSQVTHGIILKALCERKEVD 56

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A      +  ++   +VV+YT++I G   +   + A  LF EM   G Q  VV +  I+
Sbjct: 57  QALSYFHSVSPRS-DLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQ-CVVAYTAII 114

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           + L K  + D+A    + M+     PD  T+  ++ G C  G++N A E+F  M   G K
Sbjct: 115 NALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWK 174

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             +  Y+ L++G  K   ++ A  L  E++S+G+KP  V + +   GL +  +VE A KL
Sbjct: 175 PDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKL 234

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
             EM +   A           G    G I EA+ L   +       D+R Y +LI GL  
Sbjct: 235 VREMGKMCAAE---VLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFY 291

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
             R + A E+F ++     VP+  TY +++   C  G+M  A  +   M+   +  N   
Sbjct: 292 VRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHV 351

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
           ++ L+ GF+ +N   + I +   M    V P  SIV+  + +L   ++   +     + E
Sbjct: 352 YNSLMDGFLGVNRAREAINVYSTMLRKMVKP--SIVTYNILMLGLCKLGQTADARLVLRE 409

Query: 477 QQEE 480
            +E 
Sbjct: 410 MRER 413



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 7/273 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +   ++K   T D   +T+LI GL    R  EA  +F  +   GC PD  TY
Sbjct: 258 GKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTY 317

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +V+  C+      A  + E M           E N   Y +++DG        +A  +
Sbjct: 318 GMIVSHFCKQGKMQAACKVVEIMDAAG------LEANCHVYNSLMDGFLGVNRAREAINV 371

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELC 180
              M  K +KP++VTY  ++ G C      +A+ +  EM ++ G+ P +V++  ++  L 
Sbjct: 372 YSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLG 431

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+ DEA  +   M+ +GV PD  +  +L+    +  R++ A +L   M  MG      
Sbjct: 432 KAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDAL 491

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +Y+ L+   C   ++  A  +  EM+     PD
Sbjct: 492 AYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPD 524


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 222/448 (49%), Gaps = 6/448 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V G + +    P  VT+ +++   C E R+ +A  L ++++  GC P+  TY  LVNGL 
Sbjct: 202 VYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLS 261

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A  L EEM N           +  TY  +I+G C++G   +A +L+ +M ++ 
Sbjct: 262 KKGELEQAKGLIEEMLNSG------LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P + TY +++ G C        +  F +M+     P++V+FN ++   C+ G + EA 
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L D +    + P   TYNTL+ G C+ G ++ A  L   M   G    +F+Y+IL+NG 
Sbjct: 376 LLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGC 435

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K   +  A   ++EMLSKG+KPD   +NT  VG  +I     AF + +EM   G   D 
Sbjct: 436 FKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDV 495

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY  F+  LC+ G   EA +L   +       D   Y S+I+G  K+G L  A E+F  
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P+VVTY+++I        +D A   F  M E +V  NVIT++ +I G      
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVD 457
             +  +   +M+E  ++P+    +I+++
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILIN 643



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 222/461 (48%), Gaps = 6/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  + +    P+ VT+  L+ GL  +  + +A  L  ++   G     +TY
Sbjct: 229 GRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTY 288

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+    + A +L EEM N          P   TY T++ GLCK   V   +  
Sbjct: 289 NPLINGFCQKGLFVEAFDLVEEMVNRRAF------PTLSTYNTLMYGLCKWVQVTGVRLR 342

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M      P++V++ S++ G+C     +EA  LF E+  + + P V+T+N ++  LC 
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A RL   M   G+ PD FTY  L++G    G V+ A+  F  M S G K   F+
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  I G  K  +   A S+  EML+ G  PDV+ +N     L +    E A  L + M 
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  D  TY + I+G  KNG++ +A E+F+ +        +  Y  LI        L+
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A   F  +    +  NV+TY+ +I GLC   +MD+A   F +MEE  ++PN  ++ +LI
Sbjct: 583 LAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                +    + + L  +M +  + PD+   S+ +  L ++
Sbjct: 643 NESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRD 683



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 196/389 (50%), Gaps = 5/389 (1%)

Query: 79  NLFEEMANGNG---EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           NL  +  N  G   +FG+  +P  VTY T++D  CKEG VD+A ELL +M+++   PN V
Sbjct: 194 NLLSKAKNVYGMMEQFGI--KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY  ++ G     +  +AK L  EM++ G+  +  T+N +++  C+ G   EA  L++ M
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +     P   TYNTL+ G C   +V   +  F  M        + S++ L+ GYC+   I
Sbjct: 312 VNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCI 371

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  L+ E+  + + P V+ +NTL  GL     ++ A +L  EM   G+  D +TY   
Sbjct: 372 SEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           ++G  K GY+  A   F+ +     + D  AYN+ I G  K     +A  +   +     
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+V+TY++ +  LC  G  ++A DL  +M  + ++P+ +T+  +I GF++     K  E
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           + ++M    V P     ++++   A  ++
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 197/410 (48%), Gaps = 21/410 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T+ +L+ GLC   ++      F+ +      PD+ ++ +L+ G CRT     A  L
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+E+   +        P  +TY T+I GLC  G++D A  L  +M D+ + P++ TYT +
Sbjct: 378 FDELKCRD------LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 141 IRGFCYAKDW-NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           + G C+   + + A+  F EM+ +G++P+   +N  +    K      A  + + M+  G
Sbjct: 432 VNG-CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD  TYN  +   C  G    A +L  +M S G      +Y+ +ING+ KN  +  A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +++EMLSKG+ P VV +  L         ++ AF  F +M    V A+  TY   I+GL
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610

Query: 320 CKNGYIVEAVELFHTLR---ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           C    + EA + F  +    IL  +F   +Y  LI+  C  G  E AL L+R +    + 
Sbjct: 611 CMTRRMDEAYKYFDEMEEKGILPNKF---SYTILINESCNMGYWEEALRLYREMLDRKIQ 667

Query: 377 PNVVTYSIMIGGLCNDGQMDKAR---DLFLDMEENAVVPNVITFDMLIRG 423
           P+  T+S+ +  L  D Q+   +    L  ++E+N  V      +MLI G
Sbjct: 668 PDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNINV----RIEMLIGG 713



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 142/309 (45%), Gaps = 50/309 (16%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFT---KLRVFGCEPD 57
           +G VS        +L     PD   + + I G   E +I + +  F+   ++   G  PD
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG---EMKIADTSVAFSMQEEMLAAGFPPD 494

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           V TY   V+ LC+  +   A +L E M +     G++  P+ VTYT+II+G  K G + K
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSD----GLI--PDHVTYTSIINGFVKNGHLRK 548

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A+E+  +M  K + P+VVTYT +I      +  + A   F +M+++ V  NV+T+N I++
Sbjct: 549 AREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIIN 608

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LC   +MDEA +  D M + G+ P+ F+Y  L++  C  G                   
Sbjct: 609 GLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGY------------------ 650

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL---FEIHQVERAF 294
                             E AL LY EML + I+PD   H+     L   +++H V+   
Sbjct: 651 -----------------WEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVE 693

Query: 295 KLFDEMQRN 303
            L   ++ N
Sbjct: 694 SLIQNVEDN 702



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 90/190 (47%)

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L ++ +M+  G+ PDV   N +   L + + + +A  ++  M++ G+     TY T +D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G + +A+EL   ++   C  +   YN L++GL K G LE A  L   +    L  +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
             TY+ +I G C  G   +A DL  +M      P + T++ L+ G  +  + + V     
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 439 KMKEINVMPD 448
            M +    PD
Sbjct: 345 DMLKSKFTPD 354


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 220/422 (52%), Gaps = 16/422 (3%)

Query: 18  CFTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           C  P  +VT+  LI+G C  S +  A +L  ++ V G + +  T + ++ GLCR      
Sbjct: 19  CQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQ 78

Query: 77  ALNLFE---EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKP 132
           AL  F+   E+A+         +P+ V+YTT+I+GLCK G VD A +L  +M      +P
Sbjct: 79  ALEHFDASLELAHA--------QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRP 130

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N  TY +++ G C     + A+ +  E   +   P+VVT+N +M  L + G++DEA    
Sbjct: 131 NAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATF 190

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M + G  P   ++N ++ G C   R+  A E+F  M        + +YS++I+G CK+
Sbjct: 191 TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKS 250

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +++ A  L   M+S+G +PD+V +  L +G     +++ A  L   M   G   D  TY
Sbjct: 251 DQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTY 310

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              ID LCK G + +A E+F  L   KC  ++  Y++LI G C++ R++   ++ R + C
Sbjct: 311 TVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMAC 370

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               PNVVTY+ MI GL    + ++A  +F +M E   VP+  T+  L R    I++P  
Sbjct: 371 R---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQPPH 427

Query: 433 VI 434
           V+
Sbjct: 428 VL 429



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 199/392 (50%), Gaps = 11/392 (2%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY  L+ G C  S    A +L  EM       G+ C  N  T + I+ GLC+ G V +A 
Sbjct: 27  TYNVLIRGFCNASDLDAAFSLLREM----DVEGMQC--NDRTTSIILQGLCRCGRVAQAL 80

Query: 120 ELL-LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMD 177
           E     ++  + +P+VV+YT++I G C     + A  LF +M+  G  +PN  T+N ++D
Sbjct: 81  EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVD 140

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LCK  ++D A  ++    +    PD  TYNTL+      GRV+ A   F  M   G   
Sbjct: 141 GLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVP 200

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           T+ S++ +I G C+ + +  AL +++EM+ +   P++V ++ +  GL +  Q++ A +L 
Sbjct: 201 TLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           D M   G   D   Y   + G    G +  A+ L   +    C  D+  Y  +ID LCK 
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GR++ A E+FR L      PNVVTYS +IGG C   ++D+   +   M E A  PNV+T+
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTY 377

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           + +I G   ++   +   +  +M E   +PDA
Sbjct: 378 NTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 409



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 184/358 (51%), Gaps = 42/358 (11%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            +  + VTY  +IRGFC A D + A  L  EM  +G+Q N  T ++I+  LC+ G++ +A
Sbjct: 20  QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQA 79

Query: 189 SRLLD--LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSIL 245
               D  L + H  +PD  +Y TL++G C  GRV+ A +LF  M  + GC+   F+Y+ L
Sbjct: 80  LEHFDASLELAHA-QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNAL 138

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++G CK   ++ A ++ +E   +   PDVV +NTL   LF++ +V+ A   F +M   G 
Sbjct: 139 VDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGY 198

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS-------- 357
                ++   I GLC+   + +A+E+F+ +       ++  Y+ +IDGLCKS        
Sbjct: 199 VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQ 258

Query: 358 ---------------------------GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
                                      GRL+ AL L R +     +P+VVTY+++I  LC
Sbjct: 259 LLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLC 318

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             G++D A ++F ++  N   PNV+T+  LI G+ R    S+V E    M+E+   P+
Sbjct: 319 KVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR---ASRVDEGGKVMREMACRPN 373



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 167/315 (53%), Gaps = 12/315 (3%)

Query: 1   MGRVSHGFVVLGRILKS--CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDV 58
           +GRV   F +  +++ +  C  P+A T+ +L+ GLC + R+  A A+ T+ R     PDV
Sbjct: 109 LGRVDAAFDLFRKMVAAGGC-RPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDV 167

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            TY TL+  L +      AL  F +M     E G V  P  V++  II GLC+   +  A
Sbjct: 168 VTYNTLMAALFQLGRVDEALATFTQMT----EEGYV--PTLVSFNAIITGLCRARRLADA 221

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            E+  +M D++  PN+VTY+ VI G C +   +EA++L   M+ +G +P++V +  ++  
Sbjct: 222 LEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLG 281

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
               G++D A  LL  M+  G  PD  TY  ++D  C  GRV+ A E+F  + +  C   
Sbjct: 282 FSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPN 341

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +YS LI GYC+   ++    +  EM     +P+VV +NT+  GL  + + E A+ +F 
Sbjct: 342 VVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFR 398

Query: 299 EMQRNGVAADTWTYR 313
           EM   G   D  TYR
Sbjct: 399 EMSECGFVPDARTYR 413



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 150/287 (52%), Gaps = 9/287 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     V+    K  F PD VT+ +L+  L    R+ EA A FT++   G  P + ++ 
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFN 206

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++ GLCR      AL +F EM + +        PN VTY+ +IDGLCK   +D+A++LL
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRD------FHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  +  +P++V YT ++ GF  A   + A  L   M+ QG  P+VVT+ V++D+LCK 
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++D+A  +   ++ +   P+  TY+ L+ G+C   RV+   ++   M  M C+  V +Y
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTY 377

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           + +I G       E A  ++ EM   G  PD   +  L   L  I Q
Sbjct: 378 NTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQ 424



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 127/249 (51%), Gaps = 3/249 (1%)

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G  N A +LF          +V +Y++LI G+C   +++ A SL  EM  +G++ +   
Sbjct: 4   AGSHNQALQLFRENPCQLPASSV-TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRT 62

Query: 277 HNTLFVGLFEIHQVERAFKLFD-EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            + +  GL    +V +A + FD  ++      D  +Y T I+GLCK G +  A +LF  +
Sbjct: 63  TSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKM 122

Query: 336 RILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                C  +   YN+L+DGLCK  RL+ A  +          P+VVTY+ ++  L   G+
Sbjct: 123 VAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGR 182

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D+A   F  M E   VP +++F+ +I G  R    +  +E+ ++M + +  P+    S+
Sbjct: 183 VDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSV 242

Query: 455 VVDLLAKNE 463
           V+D L K++
Sbjct: 243 VIDGLCKSD 251



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L R++     PD VT+T +I  LC   R+ +A  +F +L    C P+V TY
Sbjct: 286 GRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTY 345

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+ G CR S       +  EMA         C PN VTY T+I GL      ++A  +
Sbjct: 346 SALIGGYCRASRVDEGGKVMREMA---------CRPNVVTYNTMIWGLSMVDRNEEAYGM 396

Query: 122 LLQMKDKNIKPNVVTYTSVIRGF 144
             +M +    P+  TY  + R  
Sbjct: 397 FREMSECGFVPDARTYRGLKRAL 419



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           + ++G    AL+LFR  PC  L  + VTY+++I G CN   +D A  L  +M+   +  N
Sbjct: 1   MVRAGSHNQALQLFRENPCQ-LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEI-NVMPDASIVSIVVDLLAK 461
             T  ++++G  R    ++ +E      E+ +  PD    + +++ L K
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCK 108


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 191/332 (57%), Gaps = 17/332 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTFT+L+ GLC E R+++A AL  ++   G +P    Y T++NGLC+   T  ALNL
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M   +       + + V Y  IID LCK+G    A+ L  +M DK I P+V+TY+ +
Sbjct: 64  LSKMEETH------IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I  FC +  W +A++L  +M+++ + P+VVTF+ +++ L K GK+ EA  +   M++ G+
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P   TYN+++DGFC   R+N AK +  SM S  C   V ++S LINGYCK K ++  + 
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ EM  +GI  + V + TL  G  ++  ++ A  L + M  +GVA +  T+++ +  LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 321 KNGYIVEAVELFHTL-------RILKCEFDIR 345
               + +A  +   L       RI++ +F I+
Sbjct: 298 SKKELRKAFAILEDLQKSEVCPRIVQAKFKIQ 329



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 167/321 (52%), Gaps = 4/321 (1%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C P+ VT+TT+++GLC EG V +A  L+ +M ++  +P    Y ++I G C   D   A 
Sbjct: 6   CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  +M +  ++ +VV +N I+D LCK+G    A  L   M   G+ PD  TY+ ++D F
Sbjct: 62  NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C +GR   A++L   M        V ++S LIN   K  ++  A  +Y +ML +GI P  
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +N++  G  +  ++  A ++ D M     + D  T+ T I+G CK   +   +E+F  
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +       +   Y +LI G C+ G L+ A +L   +    + PN +T+  M+  LC+  +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301

Query: 395 MDKARDLFLDMEENAVVPNVI 415
           + KA  +  D++++ V P ++
Sbjct: 302 LRKAFAILEDLQKSEVCPRIV 322



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 165/323 (51%), Gaps = 4/323 (1%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M +   +P+VVT+T+++ G C      +A  L   M+++G QP    +  I++ LCK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
            + A  LL  M +  ++     YN ++D  C  G   HA+ LF  M   G    V +YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+ +C++     A  L  +M+ + I PDVV  + L   L +  +V  A +++ +M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +   T TY + IDG CK   + +A  +  ++    C  D+  +++LI+G CK+ R++  +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E+F  +    +V N VTY+ +I G C  G +D A+DL   M  + V PN ITF  ++   
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 425 IRINEPSKVIELLHKMKEINVMP 447
               E  K   +L  +++  V P
Sbjct: 297 CSKKELRKAFAILEDLQKSEVCP 319



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 155/306 (50%), Gaps = 5/306 (1%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M++ G +P+VVTF  +M+ LC  G++ +A  L+D M++ G +P    Y T+++G C  G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
              A  L   ME    K  V  Y+ +I+  CK+     A +L++EM  KGI PDV+ ++ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +        +   A +L  +M    +  D  T+   I+ L K G + EA E++  +    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
                  YNS+IDG CK  RL  A  +  S+      P+VVT+S +I G C   ++D   
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVDL 458
           ++F +M    +V N +T+  LI GF ++ +     +LL+ M    V P+  +  S++  L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 459 LAKNEI 464
            +K E+
Sbjct: 297 CSKKEL 302



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 6/275 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG       +L ++ ++      V + ++I  LC +   + A  LFT++   G  PDV T
Sbjct: 54  MGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++  CR+     A  L  +M            P+ VT++ +I+ L KEG V +A+E
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQ------INPDVVTFSALINALVKEGKVSEAEE 167

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M  + I P  +TY S+I GFC     N+AKR+   M  +   P+VVTF+ +++  C
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++D    +   M + G+  +  TY TL+ GFC  G ++ A++L   M S G      
Sbjct: 228 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYI 287

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           ++  ++   C  KE+  A ++  ++    + P +V
Sbjct: 288 TFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIV 322



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 4/243 (1%)

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   GC+  V +++ L+NG C    +  AL+L   M+ +G +P    + T+  GL ++  
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            E A  L  +M+   + A    Y   ID LCK+G+ + A  LF  +       D+  Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +ID  C+SGR   A +L R +    + P+VVT+S +I  L  +G++ +A +++ DM    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + P  IT++ +I GF + +  +    +L  M   +  PD    S +++   K +   N +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 470 PSF 472
             F
Sbjct: 237 EIF 239



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+VVT++ ++ GLC +G++ +A  L   M E    P    +  +I G  ++ +    + L
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           L KM+E ++     I + ++D L K+   +++   FT
Sbjct: 64  LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFT 100


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 223/443 (50%), Gaps = 7/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V++TS+I  LC   R+ EA  LF ++      P  + Y T++ G         A  L
Sbjct: 16  PDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKL 75

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E +     E G  C P+ V++ +I+  L K+  VD+A  L   MK K+ +PN  TY  +
Sbjct: 76  LERLR----ERG--CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNII 128

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      EA R+  EM    + PN++T N+++D LCK  K++EA ++ +   Q G 
Sbjct: 129 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 188

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY +L+DG    G+V+ A  LF  M   G       Y+ LI  +  +   E    
Sbjct: 189 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 248

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ E++ +G KPD+ + NT    +F+  +VE+   +F++++  G   D  +Y   I GL 
Sbjct: 249 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 308

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G   E   +FH ++      D RAYN+++DG CKSG++  A E+   +    + P V 
Sbjct: 309 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 368

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY  ++ GL    ++D+A  LF + +   +  NV+ +  LI GF ++    +   +L +M
Sbjct: 369 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 428

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
            +  + P+    + ++D L K E
Sbjct: 429 MKKGLTPNVYTWNSLLDALVKAE 451



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 230/447 (51%), Gaps = 6/447 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  ++K    P++ T+  +I  LC   R+ EA  +  ++      P++ T   +V+ LC+
Sbjct: 110 LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 169

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 A  +FE  A+  G     C P+ VTY ++IDGL K+G VD+A  L  +M D   
Sbjct: 170 ARKLEEAYKIFES-ASQRG-----CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 223

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
             N V YTS+IR F       +  ++F E++ +G +P++   N  MD + K G++++   
Sbjct: 224 NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 283

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           + + +  +G  PD  +Y+ L+ G    G+      +F +M+  G      +Y+ +++G+C
Sbjct: 284 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 343

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K+ ++  A  +  EM  K ++P V  +  +  GL +I +++ A+ LF+E +  G+  +  
Sbjct: 344 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            Y + IDG  K G I EA  +   +       ++  +NSL+D L K+  +  AL  F+S+
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 463

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                 PN  TYSI+I GLC   + +KA   + DM++  +VPNV+T+  +I G  ++   
Sbjct: 464 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 523

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVD 457
           +    L  + K    +PDA+  + +++
Sbjct: 524 TDAYSLFERFKANGGIPDAASFNALIE 550



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 227/460 (49%), Gaps = 7/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +  ++      P A  + ++I G  +  R  +A  L  +LR  GC P V ++
Sbjct: 32  GRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSF 91

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++  L +      AL+LFE M           EPN+ TY  IID LC  G V++A  +
Sbjct: 92  NSILTCLGKKRKVDEALSLFEVMKKD-------AEPNSSTYNIIIDMLCLGGRVEEAYRI 144

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+  ++ PN++T   ++   C A+   EA ++F     +G  P+ VT+  ++D L K
Sbjct: 145 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 204

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA RL + M+  G   +   Y +L+  F + GR     ++F  +   GCK  +  
Sbjct: 205 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 264

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            +  ++   K  E+E    ++ ++ S G  PDV  ++ L  GL +  Q      +F  M+
Sbjct: 265 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 324

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G A D   Y   +DG CK+G + +A E+   ++    +  +  Y +++DGL K  RL+
Sbjct: 325 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 384

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF       +  NVV YS +I G    G++D+A  +  +M +  + PNV T++ L+
Sbjct: 385 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 444

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              ++  E ++ +     MKE+   P+    SI+++ L +
Sbjct: 445 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 484



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 195/366 (53%), Gaps = 1/366 (0%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           +P+ V+YT++I  LCK G + +A+EL  QM+ +   P    Y ++I G+  A  + +A +
Sbjct: 15  KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYK 74

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           L   + ++G  P+VV+FN I+  L K  K+DEA  L ++M +    P++ TYN ++D  C
Sbjct: 75  LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLC 133

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           L GRV  A  +   ME       + + +I+++  CK +++E A  ++     +G  PD V
Sbjct: 134 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 193

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            + +L  GL +  QV+ A++LF++M   G  A+   Y + I     +G   +  ++F  L
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               C+ D+   N+ +D + K+G +E    +F  +     +P+V +YSI+I GL   GQ 
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 313

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            +  ++F  M++     +   ++ ++ GF +  +  K  E+L +MKE  V P  +    +
Sbjct: 314 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAI 373

Query: 456 VDLLAK 461
           VD LAK
Sbjct: 374 VDGLAK 379



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 171/329 (51%), Gaps = 6/329 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +   +++    PD     + +  +     + +   +F  +R +G  PDV +Y
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +        N+F  M      F +    +   Y  ++DG CK G V KA E+
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQG--FAL----DARAYNAVVDGFCKSGKVHKAYEI 354

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK+K ++P V TY +++ G       +EA  LF E   +G++ NVV ++ ++D   K
Sbjct: 355 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGK 414

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA  +L+ M++ G+ P+ +T+N+LLD       +N A   F SM+ M C    ++
Sbjct: 415 VGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYT 474

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILING C+ ++   A   + +M  +G+ P+VV + T+  GL ++  +  A+ LF+  +
Sbjct: 475 YSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFK 534

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            NG   D  ++   I+G+      +EA +
Sbjct: 535 ANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 168/370 (45%), Gaps = 45/370 (12%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A + F E+  QG++P+ V++  ++  LCK G++ EA  L   M      P A+ YNT++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+   GR   A +L   +   GC  +V S++ ++    K ++++ ALSL+ E++ K  +P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +   +N +   L    +VE A+++ DEM+   +  +  T    +D LCK   + EA ++F
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM-----IG 387
            +     C  D   Y SLIDGL K G+++ A  LF  +       N V Y+ +     I 
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 388 GLCND------------------------------GQMDKARDLFLDMEENAVVPNVITF 417
           G   D                              G+++K R +F D+     +P+V ++
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
            +LI G  +  +  +   + H MK+     DA   + VVD   K         S  VH+ 
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK---------SGKVHKA 351

Query: 478 QEEVDESNVK 487
            E ++E   K
Sbjct: 352 YEILEEMKEK 361



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 6/153 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   +++L  ++K   TP+  T+ SL+  L     I EA   F  ++   C P+ +T
Sbjct: 415 VGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYT 474

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+NGLCR      A   +++M       G+V  PN VTYTT+I GL K G +  A  
Sbjct: 475 YSILINGLCRVQKYNKAFVFWQDMQKQ----GLV--PNVVTYTTMISGLAKVGNITDAYS 528

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           L  + K     P+  ++ ++I G   A    EA
Sbjct: 529 LFERFKANGGIPDAASFNALIEGMSNANRAMEA 561



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 57/123 (46%)

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A + F  L    L P+ V+Y+ MI  LC  G++ +A +LF  ME    VP    ++ +I
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
            G+          +LL +++E   +P     + ++  L K      +L  F V ++  E 
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP 120

Query: 482 DES 484
           + S
Sbjct: 121 NSS 123


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 228/447 (51%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +  ++L     P+ VT+  L+ GLC   R+ E  AL  ++      PD FTY
Sbjct: 243 GDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTY 302

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L +GL RT  +   L+LF E        G        T + +++GLCK+G V KAK++
Sbjct: 303 SILFDGLTRTGESQTMLSLFAESLKKGVMLGAY------TCSILLNGLCKDGKVAKAKQV 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +    + P  V Y ++I G+C  +D   A  +F +M  + ++P+ +T+N +++ LCK
Sbjct: 357 FEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + +A  L+  M + GV P   T+NTL+D +   G++     +   M+  G K  V S
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +  ++  +CKN +I  A+++  +M+ K + P+  ++N++     E    E+A  L ++M+
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMK 536

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +GV+A   TY   + GLC++  I EA EL +TLR      D+ +YN++I   C  G  +
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 596

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALEL + +    + P + T   ++  L + G++     L+  M    V P+   + +++
Sbjct: 597 KALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
             ++R    SKV  L  +M E  +  D
Sbjct: 657 DAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 225/510 (44%), Gaps = 74/510 (14%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   +   L++ L    R  +  A F  L   G  PD F +  +V          VAL +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M    G       P+  +Y  +I GL + G    A ++  +M D  + PN +TY ++
Sbjct: 180 LRRMGRSEG----APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTM 235

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G     D     RL  +M+  G +PNVVT+NV++  LC+ G+MDE   L+D M  H +
Sbjct: 236 IDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSM 295

Query: 201 RPDAFTYNTLLD-----------------------------------GFCLTGRVNHAKE 225
            PD FTY+ L D                                   G C  G+V  AK+
Sbjct: 296 LPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQ 355

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F  +   G   T   Y+ LINGYC+ +++ GA  ++ +M S+ I+PD + +N L  GL 
Sbjct: 356 VFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC 415

Query: 286 EIH-----------------------------------QVERAFKLFDEMQRNGVAADTW 310
           ++                                    Q+E+ F +  +MQ+ G+ +D  
Sbjct: 416 KLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 475

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           ++ + +   CKNG I EAV +   +       + + YNS+ID   +SG  E AL L   +
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               +  ++VTY++++ GLC   Q+D+A +L   +    + P+V++++ +I       + 
Sbjct: 536 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 595

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            K +ELL +M +  + P       +V  LA
Sbjct: 596 DKALELLQEMNKYGIRPTLRTCHTLVSALA 625



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 224/478 (46%), Gaps = 41/478 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA ++  +I GL    +  +A  +F ++   G  P+  TY T+++G  +         L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            ++M +   +      PN VTY  ++ GLC+ G +D+ + L+ +M   ++ P+  TY+ +
Sbjct: 252 RDQMLHDGPK------PNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSIL 305

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG- 199
             G     +      LF E + +GV     T +++++ LCK+GK+ +A ++ ++++  G 
Sbjct: 306 FDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGL 365

Query: 200 ----------------------------------VRPDAFTYNTLLDGFCLTGRVNHAKE 225
                                             +RPD  TYN L++G C    V  A++
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 425

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L + ME  G   +V +++ LI+ Y    ++E   ++ S+M  KGIK DV+   ++     
Sbjct: 426 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 485

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +  ++  A  + D+M    VA +   Y + ID   ++G   +A+ L   ++       I 
Sbjct: 486 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIV 545

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YN L+ GLC+S +++ A EL  +L    L P+VV+Y+ +I   CN G  DKA +L  +M
Sbjct: 546 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +  + P + T   L+           +  L  +M   NV P +SI  I+VD   + E
Sbjct: 606 NKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCE 663



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 152/301 (50%), Gaps = 4/301 (1%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P++ + N++++ L   G+  +      L++  G RPD F +N ++      G ++ A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 227 FVSM-ESMGCKHT-VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
              M  S G      FSY+++I G  ++ +   AL ++ EM+  G+ P+ + +NT+  G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +   +E  F+L D+M  +G   +  TY   + GLC+ G + E   L   +       D 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 345 RAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
             Y+ L DGL ++G  +  L LF  SL  GV++    T SI++ GLC DG++ KA+ +F 
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVML-GAYTCSILLNGLCKDGKVAKAKQVFE 358

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +    +VP  + ++ LI G+ ++ +      +  +MK  ++ PD    + +++ L K E
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 464 I 464
           +
Sbjct: 419 M 419



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 11/205 (5%)

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           ++++ + LFVG      V  AF L   +   G   DT+ +   +      G +  A+ + 
Sbjct: 126 NLLLESLLFVGRHA--DVRAAFGL---LVAAGARPDTFAWNKVVQACVAAGDLDVALAML 180

Query: 333 HTLRILKCEF----DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
              R+ + E     D  +YN +I GL +SG+   AL++F  +    + PN +TY+ MI G
Sbjct: 181 R--RMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               G ++    L   M  +   PNV+T+++L+ G  R     +   L+ +M   +++PD
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFT 473
               SI+ D L +   S   L  F 
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFA 323


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/372 (34%), Positives = 201/372 (54%), Gaps = 7/372 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +L+  F  D  TFT +I     +     A   F +L   G EP++  +T ++ GLC+
Sbjct: 228 LSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCK 287

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKN 129
                 A  + EEM  G G      +PN  T+T++IDGLCK+G+ +KA  L L++ + +N
Sbjct: 288 RGSIKQAFEMLEEMV-GKG-----WKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSEN 341

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            KPNV+TYT++I G+C     N A+ L   M +QG+ PN  T+  ++D  CK G  + A 
Sbjct: 342 HKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAY 401

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L++LM   G  P+  TYN +++G C  GRV  A ++       G K   F+Y+IL++ +
Sbjct: 402 DLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEH 461

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK + I  AL+L+++ML  GI+PD+  + TL       ++++ +   F+E  R G+    
Sbjct: 462 CKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTN 521

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + I G C+ G +  A++ FH L    C  D   Y ++I GLCK  + + A  L+ S
Sbjct: 522 KTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDS 581

Query: 370 LPCGVLVPNVVT 381
           +    LVP  VT
Sbjct: 582 MIEKGLVPCEVT 593



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 211/418 (50%), Gaps = 9/418 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG V +  ++   +      PD++++  ++   C    I+EA    + +   G   D  T
Sbjct: 183 MGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNAT 242

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T +++      +T  AL  F  +     + G+  EPN + +T +I+GLCK G + +A E
Sbjct: 243 FTLIISRFSGKGYTTRALWYFRRLV----DMGL--EPNLINFTCMIEGLCKRGSIKQAFE 296

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE-AKRLFIEMM-DQGVQPNVVTFNVIMDE 178
           +L +M  K  KPNV T+TS+I G C  K W E A RLF++++  +  +PNV+T+  ++  
Sbjct: 297 MLEEMVGKGWKPNVYTHTSLIDGLC-KKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISG 355

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            C+  K++ A  LL  M + G+ P+  TY TL+DG C  G    A +L   M S G    
Sbjct: 356 YCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPN 415

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           + +Y+ ++NG CK   ++ A  +  +    G+KPD   +N L     +   + +A  LF+
Sbjct: 416 LCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFN 475

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M + G+  D  +Y T I   C+   + E+   F     +      + Y S+I G C+ G
Sbjct: 476 KMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREG 535

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            L +A++ F  L      P+ +TY  +I GLC   + D+AR L+  M E  +VP  +T
Sbjct: 536 NLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVT 593



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 217/448 (48%), Gaps = 7/448 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     ++  +      P+  T   +IK       +  A  LF ++ V G +PD  +
Sbjct: 148 VGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSIS 207

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +V   C+  + + A      M     E G V +    T+T II     +G+  +A  
Sbjct: 208 YRVMVVMYCKIGNILEADKWLSVML----ERGFVVD--NATFTLIISRFSGKGYTTRALW 261

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              ++ D  ++PN++ +T +I G C      +A  +  EM+ +G +PNV T   ++D LC
Sbjct: 262 YFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLC 321

Query: 181 KNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           K G  ++A RL L L+     +P+  TY  ++ G+C   ++N A+ L   M+  G     
Sbjct: 322 KKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNT 381

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+G+CK    E A  L + M S+G  P++  +N +  GL +  +V+ A+K+ ++
Sbjct: 382 NTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLED 441

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
             +NG+  D +TY   +   CK   I +A+ LF+ +  +  + DI +Y +LI   C+  R
Sbjct: 442 GFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENR 501

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ +   F       ++P   TY+ MI G C +G +  A   F  + ++   P+ IT+  
Sbjct: 502 MKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGA 561

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMP 447
           +I G  + ++  +   L   M E  ++P
Sbjct: 562 IISGLCKQSKRDEARSLYDSMIEKGLVP 589



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 203/426 (47%), Gaps = 7/426 (1%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           R+ EA  +  ++   G  P+  T   ++           A  LFEEM       GV  +P
Sbjct: 150 RLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVR----GV--QP 203

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           ++++Y  ++   CK G + +A + L  M ++    +  T+T +I  F        A   F
Sbjct: 204 DSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYF 263

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             ++D G++PN++ F  +++ LCK G + +A  +L+ M+  G +P+ +T+ +L+DG C  
Sbjct: 264 RRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKK 323

Query: 218 GRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           G    A  LF+ +  S   K  V +Y+ +I+GYC+  ++  A  L S M  +G+ P+   
Sbjct: 324 GWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNT 383

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + TL  G  +    ERA+ L + M   G + +  TY   ++GLCK G + EA ++     
Sbjct: 384 YTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGF 443

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + D   YN L+   CK   +  AL LF  +    + P++ +Y+ +I   C + +M 
Sbjct: 444 QNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMK 503

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           ++   F +     ++P   T+  +I G+ R    +  ++  H++ +    PD+     ++
Sbjct: 504 ESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAII 563

Query: 457 DLLAKN 462
             L K 
Sbjct: 564 SGLCKQ 569



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 163/321 (50%), Gaps = 7/321 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFT 60
           G +   F +L  ++   + P+  T TSLI GLC +    +A  LF KL R    +P+V T
Sbjct: 289 GSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 348

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++G CR       LN  E + +   E G+V  PNT TYTT+IDG CK G  ++A +
Sbjct: 349 YTAMISGYCRED----KLNRAEMLLSRMKEQGLV--PNTNTYTTLIDGHCKAGNFERAYD 402

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+  M  +   PN+ TY +++ G C      EA ++  +    G++P+  T+N++M E C
Sbjct: 403 LMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHC 462

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   + +A  L + M++ G++PD  +Y TL+  FC   R+  ++  F     +G   T  
Sbjct: 463 KQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNK 522

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I GYC+   +  A+  +  +   G  PD + +  +  GL +  + + A  L+D M
Sbjct: 523 TYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 582

Query: 301 QRNGVAADTWTYRTFIDGLCK 321
              G+     T  T     CK
Sbjct: 583 IEKGLVPCEVTRITLAYEYCK 603



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 216/462 (46%), Gaps = 22/462 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTY---TTLVNGLCRTSHTIV 76
           P + T    +  L  ES    A    +  R+ FG E D  T+    ++V  L   + ++V
Sbjct: 38  PISQTMVQRVCSLVCESYNQHAHMRVSSQRLHFGIEVDFLTHEQAVSVVASLASDAGSMV 97

Query: 77  ALNLFEEMANGNGEFG------VVC----------EPNTVTYTTIIDGLCKEGFVDKAKE 120
            L+ F   A G  +F       +VC          E        +++   + G + +A E
Sbjct: 98  TLSFFH-WAIGYPKFRHFMRLYIVCAMSLIGNRNSEKACEVMRCMVESFSEVGRLKEAVE 156

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++++M ++ + PN  T   +I+          A+ LF EM  +GVQP+ +++ V++   C
Sbjct: 157 MVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYC 216

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G + EA + L +M++ G   D  T+  ++  F   G    A   F  +  MG +  + 
Sbjct: 217 KIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLI 276

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ +I G CK   I+ A  +  EM+ KG KP+V  H +L  GL +    E+AF+LF ++
Sbjct: 277 NFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKL 336

Query: 301 QRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            R+     +  TY   I G C+   +  A  L   ++      +   Y +LIDG CK+G 
Sbjct: 337 VRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGN 396

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E A +L   +      PN+ TY+ ++ GLC  G++ +A  +  D  +N + P+  T+++
Sbjct: 397 FERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNI 456

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           L+    +     + + L +KM +I + PD    + ++ +  +
Sbjct: 457 LMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCR 498


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 234/468 (50%), Gaps = 27/468 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+    F ++  ++   F PD  T++ +I  LC  S++ +A  LF +++  G  P V+TY
Sbjct: 432 GKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTY 491

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++  C+      A N F+EM   N      C PN VTYT++I    K   V  A +L
Sbjct: 492 TILIDSFCKAGLIQQARNWFDEMLRDN------CTPNVVTYTSLIHAYLKARKVFDANKL 545

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM----------------DQGV 165
              M  +  KPNVVTYT++I G C A   ++A +++  M                 +   
Sbjct: 546 FEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCE 605

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN++T+  ++D LCK  +++EA  LLD M  +G  P+   Y+ L+DGFC TG++ +A+E
Sbjct: 606 TPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQE 665

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +FV M   G    +++YS LIN   K K ++  L + S+ML     P+VVI+  +  GL 
Sbjct: 666 VFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLC 725

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           ++ + E A++L  +M+  G   +  TY   IDG  K G I + +EL+  +    C  +  
Sbjct: 726 KVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFI 785

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y  LI+  C +G L+ A  L   +       ++ +Y  +I G   + +   +  L  ++
Sbjct: 786 TYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDEL 843

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            EN  VP    + +LI  FI+       + LL   +EI+  P  ++ +
Sbjct: 844 SENESVPVESLYRILIDNFIKAGRLEGALNLL---EEISSSPSLAVAN 888



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 223/436 (51%), Gaps = 16/436 (3%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L+   TP+ VT+TSLI       ++ +A  LF  + + G +P+V TYT L++G C+   
Sbjct: 514 MLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQ 573

Query: 74  TIVALNLFEEMANGNGEFGVV----------CE-PNTVTYTTIIDGLCKEGFVDKAKELL 122
              A  ++  M  G+ E   +          CE PN +TY  ++DGLCK   V++A ELL
Sbjct: 574 IDKACQIYARM-QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELL 632

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M     +PN + Y ++I GFC       A+ +F++M ++G  PN+ T++ +++ L K 
Sbjct: 633 DTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKE 692

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++D   ++L  M+++   P+   Y  ++DG C  G+   A  L + ME +GC   V +Y
Sbjct: 693 KRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITY 752

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + +I+G+ K  +IE  L LY +M SKG  P+ + +  L         ++ A +L DEM++
Sbjct: 753 TAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQ 812

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
                   +YR  I+G   N   + ++ L   L   +       Y  LID   K+GRLE 
Sbjct: 813 TYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEG 870

Query: 363 ALELFRSLPC--GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           AL L   +     + V N   Y+ +I  L +  ++DKA +L+  M    VVP + TF  L
Sbjct: 871 ALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHL 930

Query: 421 IRGFIRINEPSKVIEL 436
           I+G  R+ +  + ++L
Sbjct: 931 IKGLTRVGKWQEALQL 946



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 223/474 (47%), Gaps = 20/474 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  ++     P+   F SL+   C       A  LF K+   GC+P    Y
Sbjct: 321 GQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLY 380

Query: 62  TTLVNGLCRTSHTIVA--LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
              +  +C       +  L L E+  +   + GVV   N V  +     LC  G  DKA 
Sbjct: 381 NIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVL--NKVNVSNFARCLCGAGKFDKAF 438

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E++ +M  K   P+  TY+ VI   C A    +A  LF EM   G+ P+V T+ +++D  
Sbjct: 439 EIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSF 498

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G + +A    D M++    P+  TY +L+  +    +V  A +LF  M   G K  V
Sbjct: 499 CKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNV 558

Query: 240 FSYSILINGYCKNKEIEGALSLYSEML----SKGIK------------PDVVIHNTLFVG 283
            +Y+ LI+G+CK  +I+ A  +Y+ M     S  I             P+++ +  L  G
Sbjct: 559 VTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDG 618

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L + ++VE A +L D M  NG   +   Y   IDG CK G +  A E+F  +       +
Sbjct: 619 LCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPN 678

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y+SLI+ L K  RL++ L++   +      PNVV Y+ MI GLC  G+ ++A  L L
Sbjct: 679 LYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLML 738

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            MEE    PNVIT+  +I GF +I +  + +EL   M      P+     ++++
Sbjct: 739 KMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLIN 792



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 231/500 (46%), Gaps = 63/500 (12%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY----------------- 61
           F PD V +  ++ GLC  S   EA  +  ++R   C P+V TY                 
Sbjct: 268 FVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCK 327

Query: 62  ------------------TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
                              +LV+  C++     A  LF++M          C+P  + Y 
Sbjct: 328 RILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCG------CQPGYLLYN 381

Query: 104 TIIDGLCK------EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
             I  +C          ++ A++   +M D  +  N V  ++  R  C A  +++A  + 
Sbjct: 382 IFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEII 441

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EMM +G  P+  T++ ++  LC   K+++A  L + M ++G+ P  +TY  L+D FC  
Sbjct: 442 CEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKA 501

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G +  A+  F  M    C   V +Y+ LI+ Y K +++  A  L+  ML +G KP+VV +
Sbjct: 502 GLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTY 561

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAAD----------------TWTYRTFIDGLCK 321
             L  G  +  Q+++A +++  MQ +  ++D                  TY   +DGLCK
Sbjct: 562 TALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCK 621

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
              + EA EL  T+ +  CE +   Y++LIDG CK+G+LE A E+F  +      PN+ T
Sbjct: 622 ANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYT 681

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           YS +I  L  + ++D    +   M EN+  PNV+ +  +I G  ++ +  +   L+ KM+
Sbjct: 682 YSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKME 741

Query: 442 EINVMPDASIVSIVVDLLAK 461
           E+   P+    + ++D   K
Sbjct: 742 EVGCYPNVITYTAMIDGFGK 761



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 219/502 (43%), Gaps = 69/502 (13%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++   F+V   +  S F  D  T       LC   R  +A +L  K       PD   Y 
Sbjct: 220 KLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFV---PDTVFYN 276

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +V+GLC  S    A+++ + M +      + C PN VTY  ++ G   +G + + K +L
Sbjct: 277 RMVSGLCEASLFQEAMDILDRMRS------ISCIPNVVTYRILLSGCLGKGQLGRCKRIL 330

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  +   PN   + S++  +C ++D++ A +LF +M+  G QP  + +N+ +  +C N
Sbjct: 331 SMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSN 390

Query: 183 -----------------------------------------GKMDEASRLLDLMIQHGVR 201
                                                    GK D+A  ++  M+  G  
Sbjct: 391 EELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFV 450

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY+ ++   C   +V  A  LF  M+  G   +V++Y+ILI+ +CK   I+ A + 
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + EML     P+VV + +L     +  +V  A KLF+ M   G   +  TY   IDG CK
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCK 570

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G I +A +++  ++      DI  Y  L D  C++                   PN++T
Sbjct: 571 AGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCET-------------------PNIIT 611

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y  ++ GLC   ++++A +L   M  N   PN I +D LI GF +  +     E+  KM 
Sbjct: 612 YGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMS 671

Query: 442 EINVMPDASIVSIVVDLLAKNE 463
           E    P+    S +++ L K +
Sbjct: 672 ERGYCPNLYTYSSLINSLFKEK 693



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 213/516 (41%), Gaps = 68/516 (13%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RVSH F++  R          + F  LI+  C       A     +L+ FG +    TY 
Sbjct: 152 RVSHKFLMQIRDDDRELLRKLLNF--LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYN 209

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+    R      A  +  EM+N           +  T       LCK G    A  LL
Sbjct: 210 ALIQVFLRADKLDTAFLVHREMSNSGFRM------DGCTLGCFAYSLCKAGRCGDALSLL 263

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
              + +   P+ V Y  ++ G C A  + EA  +   M      PNVVT+ +++      
Sbjct: 264 ---EKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGK 320

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++    R+L +M+  G  P+   +N+L+  +C +   ++A +LF  M   GC+     Y
Sbjct: 321 GQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLY 380

Query: 243 SILINGYCKNKEIEG-----------------------------------------ALSL 261
           +I I   C N+E+ G                                         A  +
Sbjct: 381 NIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEI 440

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             EM+SKG  PD   ++ +   L +  +VE+AF LF+EM++NG+    +TY   ID  CK
Sbjct: 441 ICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCK 500

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G I +A   F  +    C  ++  Y SLI    K+ ++  A +LF  +      PNVVT
Sbjct: 501 AGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVT 560

Query: 382 YSIMIGGLCNDGQMDKA---------------RDLFLDMEENAV-VPNVITFDMLIRGFI 425
           Y+ +I G C  GQ+DKA                D++  +++N    PN+IT+  L+ G  
Sbjct: 561 YTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLC 620

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + N   +  ELL  M      P+  +   ++D   K
Sbjct: 621 KANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCK 656



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 19/276 (6%)

Query: 197 QHGVRPDAFTYNTLLDGFCLTG----RVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           Q G       YN L++  C       RV+H   + +  +       + ++  LI   C+N
Sbjct: 126 QIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNF--LIQKCCRN 183

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
                AL     +   G K     +N L        +++ AF +  EM  +G   D  T 
Sbjct: 184 GMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTL 243

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLEIALELF--- 367
             F   LCK G   +A+ L       K EF  D   YN ++ GLC++   + A+++    
Sbjct: 244 GCFAYSLCKAGRCGDALSLLE-----KEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRM 298

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
           RS+ C   +PNVVTY I++ G    GQ+ + + +   M      PN   F+ L+  + + 
Sbjct: 299 RSISC---IPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKS 355

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            + S   +L  KM +    P   + +I +  +  NE
Sbjct: 356 RDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNE 391


>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
 gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
          Length = 461

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/367 (35%), Positives = 193/367 (52%), Gaps = 5/367 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  +A+TFT L+KGLCA+ R  +A  +   ++   GC P+VF+
Sbjct: 98  GRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCRMTQLGCIPNVFS 157

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T L+ GLC  + +  AL L + M +  G+    C P+ V Y T+I+G  KEG  DKA  
Sbjct: 158 CTILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVLYNTVINGFFKEGDPDKAYA 213

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I P+VVTY+S+I   C A+  ++A  +   M+  GV PN  T+N I+   C
Sbjct: 214 TYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYC 273

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G++ EA   L +M   GV PD  T N L+D  C   R   A+++F SM   G K  + 
Sbjct: 274 SSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDIT 333

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  L+ GY     +     L   M+  GI+P+  + N L     +  +V+ A  +F +M
Sbjct: 334 TYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKM 393

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           ++ G++ +   YRT ID LCK G + +AV     +       DI  Y  LI G C   + 
Sbjct: 394 RQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDKW 453

Query: 361 EIALELF 367
           E A EL 
Sbjct: 454 EKAEELI 460



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 192/386 (49%), Gaps = 7/386 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP+  T++ LI   C   R+    A    +   G   +  T+T L+ GLC    T  A++
Sbjct: 81  TPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMD 140

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVTY 137
           +        G     C PN  + T ++ GLC E    +A ELL  M D   +  P+VV Y
Sbjct: 141 IVLCRMTQLG-----CIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLY 195

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            +VI GF    D ++A   + EM DQG+ P+VVT++ I+  LCK   MD+A  +L+ M++
Sbjct: 196 NTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 255

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +GV P+  TYN+++ G+C +G++  A      M S G +  V + ++L++  CKN+    
Sbjct: 256 NGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTE 315

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  +++ M   G+KPD+  + TL  G      +     L D M  NG+  +   +   I 
Sbjct: 316 ARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILIC 375

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
              K   + EA+ +F  +R      +   Y ++ID LCK GR+  A+   + +    L P
Sbjct: 376 AYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTP 435

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFL 403
           +++ Y+ +I G C   + +KA +L  
Sbjct: 436 DIIVYTPLIHGFCTCDKWEKAEELIF 461



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 167/336 (49%), Gaps = 5/336 (1%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + PN+ TY+ +I   C A   +        ++ +G +   +TF  ++  LC + +  +A 
Sbjct: 80  VTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 139

Query: 190 RL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYSILI 246
            + L  M Q G  P+ F+   LL G C   R   A EL   M   G  C   V  Y+ +I
Sbjct: 140 DIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVI 199

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           NG+ K  + + A + Y EM  +GI PDVV ++++   L +   +++A ++ + M +NGV 
Sbjct: 200 NGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 259

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY + + G C +G + EA+     +     E D+   N L+D LCK+ R   A ++
Sbjct: 260 PNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKI 319

Query: 367 FRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           F S+  CG L P++ TY  ++ G    G + +  DL   M  N + PN   F++LI  + 
Sbjct: 320 FNSMTKCG-LKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYA 378

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  +  + + +  KM++  + P+A     V+D+L K
Sbjct: 379 KQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCK 414



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 164/317 (51%), Gaps = 3/317 (0%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V PN+ T++V++   C+ G++D     L  +I+ G R +A T+  LL G C   R + A 
Sbjct: 80  VTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 139

Query: 225 EL-FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIHNTLF 281
           ++    M  +GC   VFS +IL+ G C     + AL L   M   G    PDVV++NT+ 
Sbjct: 140 DIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVI 199

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G F+    ++A+  + EM   G+  D  TY + I  LCK   + +A+E+ +T+      
Sbjct: 200 NGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 259

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            + R YNS++ G C SG+L  A+   + +    + P+VVT ++++  LC + +  +AR +
Sbjct: 260 PNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKI 319

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F  M +  + P++ T+  L++G+       ++ +LL  M    + P+  + +I++   AK
Sbjct: 320 FNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAK 379

Query: 462 NEISLNSLPSFTVHEQQ 478
            E    ++  F+   QQ
Sbjct: 380 QEKVDEAMLVFSKMRQQ 396



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 180/389 (46%), Gaps = 17/389 (4%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN----TVTYTTIIDGLCK 111
           P+++TY+ L+   CR       L+L      G    G V +       +T+T ++ GLC 
Sbjct: 82  PNLYTYSVLIGCCCRAGR----LDL------GFAALGNVIKKGFRVEAITFTPLLKGLCA 131

Query: 112 EGFVDKAKELLL-QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG--VQPN 168
           +     A +++L +M      PNV + T +++G C      EA  L   M D G    P+
Sbjct: 132 DKRTSDAMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPD 191

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           VV +N +++   K G  D+A      M   G+ PD  TY++++   C    ++ A E+  
Sbjct: 192 VVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLN 251

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
           +M   G      +Y+ +++GYC + ++  A+     M S G++PDVV  N L   L +  
Sbjct: 252 TMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNR 311

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           +   A K+F+ M + G+  D  TY T + G    G +VE  +L   +     + +   +N
Sbjct: 312 RCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFN 371

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            LI    K  +++ A+ +F  +    L PN V Y  +I  LC  G++  A      M   
Sbjct: 372 ILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINE 431

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELL 437
            + P++I +  LI GF   ++  K  EL+
Sbjct: 432 GLTPDIIVYTPLIHGFCTCDKWEKAEELI 460



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 183/411 (44%), Gaps = 7/411 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  +F +L   G    ++     ++ + R S    A++ +  MA    +      PN  
Sbjct: 30  DARHVFDELLRRGKGATIYGLNRALDDVARHSPA-AAVSRYNRMARAGAD---EVTPNLY 85

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY+ +I   C+ G +D     L  +  K  +   +T+T +++G C  K  ++A  + +  
Sbjct: 86  TYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCR 145

Query: 161 MDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG--VRPDAFTYNTLLDGFCLT 217
           M Q G  PNV +  +++  LC   +  EA  LL +M   G    PD   YNT+++GF   
Sbjct: 146 MTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVINGFFKE 205

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G  + A   +  M   G    V +YS +I   CK + ++ A+ + + M+  G+ P+   +
Sbjct: 206 GDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTY 265

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N++  G     Q+  A      M  +GV  D  T    +D LCKN    EA ++F+++  
Sbjct: 266 NSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTK 325

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              + DI  Y +L+ G    G L    +L   +    + PN   ++I+I       ++D+
Sbjct: 326 CGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDE 385

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           A  +F  M +  + PN + +  +I    ++      +  L +M    + PD
Sbjct: 386 AMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPD 436



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 38/316 (12%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG---VRPDAFTYN 208
           +A+ +F E++ +G    +   N  +D++ ++      SR  + M + G   V P+ +TY+
Sbjct: 30  DARHVFDELLRRGKGATIYGLNRALDDVARHSPAAAVSRY-NRMARAGADEVTPNLYTYS 88

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL-YSEMLS 267
            L+   C  GR++       ++   G +    +++ L+ G C +K    A+ +    M  
Sbjct: 89  VLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCRMTQ 148

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            G  P+V     L  GL + ++ + A +L   M  +G                       
Sbjct: 149 LGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGG---------------------- 186

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
                       C  D+  YN++I+G  K G  + A   +  +    ++P+VVTYS +I 
Sbjct: 187 -----------DCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIA 235

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC    MDKA ++   M +N V+PN  T++ ++ G+    + ++ I  L  M    V P
Sbjct: 236 ALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEP 295

Query: 448 DASIVSIVVDLLAKNE 463
           D    ++++D L KN 
Sbjct: 296 DVVTCNLLMDYLCKNR 311


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 230/464 (49%), Gaps = 10/464 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      +L  + +    PD V + ++I  LCA+  + EAA L  ++ + GC  DV T
Sbjct: 185 LGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNT 244

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  +V+GLC       A  L + M          C PN +TY  ++ GLC    V++A+ 
Sbjct: 245 FNDIVHGLCTLGRLREAARLVDRMMIRG------CVPNAITYGFLLKGLCLASQVEEART 298

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L ++ + N    VV + +VI          EA  L+  M  +G  P+  T+++++  LC
Sbjct: 299 MLGRVPELN----VVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLC 354

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G++  A +LL  M   G  P   TY  LL  FC  G  ++ + +   M   G    + 
Sbjct: 355 KLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLE 414

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ +I   CK++ ++ A+    EM S+G KPD+  +NT+   L   +Q+E A  LF+ +
Sbjct: 415 GYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENL 474

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV A+  TY T I  L +NG   +A+ L + + +  C  DI +YN LI  LC+ G +
Sbjct: 475 LHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNV 534

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + ++ L   +    + PN V+Y+++I  LC   ++  A +L  +M    + P+++T++ L
Sbjct: 535 DRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTL 594

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           I G  ++      + LL K+   +V  D    +I++    K  +
Sbjct: 595 INGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARL 638



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 220/452 (48%), Gaps = 29/452 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    +L  +     + D  TF  ++ GLC   R+ EAA L  ++ + GC P+  TY
Sbjct: 221 GGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITY 280

Query: 62  TTLVNGLCRTSH--------------------TIVALNLFE-------EMANGNGEFGVV 94
             L+ GLC  S                     T++   L +       E+    G  G  
Sbjct: 281 GFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKG-- 338

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C P+  TY+ +I GLCK G +  A +LL +M+DK   P++VTYT ++  FC    W+  +
Sbjct: 339 CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIR 398

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            +   M D+G+  N+  +N ++  +CK+ +MD+A R +  M   G +PD  TYNT++   
Sbjct: 399 AMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHL 458

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   ++  A+ LF ++   G      +Y+ LI+   +N   + A+SL ++M+  G   D+
Sbjct: 459 CNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDI 518

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +N L   L     V+R+  L  EM   G+  +  +Y   I  LCK   + +A+EL   
Sbjct: 519 VSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKE 578

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +   +   DI  YN+LI+GLCK G +  AL L   L    +  +++TY+I+I   C    
Sbjct: 579 MLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARL 638

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           +  A  L      + + PN  T+ ++++ F+R
Sbjct: 639 LHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 213/441 (48%), Gaps = 10/441 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   TF+   + LC   R  EA  +   +   GC PD   Y T+++ LC       A  L
Sbjct: 170 PTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATL 229

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM      F + C  +  T+  I+ GLC  G + +A  L+ +M  +   PN +TY  +
Sbjct: 230 LDEM------FLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFL 283

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++G C A    EA+     M+ +  + NVV FN ++     +GK+ EA+ L + M   G 
Sbjct: 284 LKGLCLASQVEEAR----TMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGC 339

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PDA TY+ L+ G C  GR+  A +L   ME  G   ++ +Y+IL++ +C+N   +   +
Sbjct: 340 PPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRA 399

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +   M  KG+  ++  +N +   + +  +++ A +   EM+  G   D  TY T I  LC
Sbjct: 400 MLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLC 459

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            N  + EA  LF  L       +   YN+LI  L ++G  + A+ L   +       ++V
Sbjct: 460 NNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIV 519

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y+ +I  LC DG +D++  L  +M E  + PN +++++LI    +       +EL  +M
Sbjct: 520 SYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEM 579

Query: 441 KEINVMPDASIVSIVVDLLAK 461
               + PD    + +++ L K
Sbjct: 580 LNQELTPDIVTYNTLINGLCK 600



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 180/389 (46%), Gaps = 9/389 (2%)

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
           F   P   +Y T++    R       L+L+  M + +        P T T++     LC+
Sbjct: 130 FAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDR-----VPPTTFTFSIAARALCR 184

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G  D+A  +L  M      P+ V Y +VI   C     NEA  L  EM   G   +V T
Sbjct: 185 LGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNT 244

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           FN I+  LC  G++ EA+RL+D M+  G  P+A TY  LL G CL  +V  A+ +   + 
Sbjct: 245 FNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVP 304

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
            +     V  ++ +I     + +++ A  LY  M SKG  PD   ++ L  GL ++ ++ 
Sbjct: 305 EL----NVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLG 360

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A KL  EM+  G A    TY   +   C+NG       +   +       ++  YN +I
Sbjct: 361 SAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMI 420

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
             +CK  R++ A+   + +      P++ TY+ +I  LCN+ QM++A  LF ++    VV
Sbjct: 421 CAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVV 480

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKM 440
            N IT++ LI   +R       I L + M
Sbjct: 481 ANAITYNTLIHALLRNGSWQDAISLANDM 509



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 162/349 (46%), Gaps = 8/349 (2%)

Query: 117 KAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNV 174
           +A  LL Q+  +  + P+  +Y +V+  F  A    +   L+  M+ +  V P   TF++
Sbjct: 118 RALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSI 177

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
               LC+ G+ DEA  +L  M +HG  PD   Y T++   C  G VN A  L   M  MG
Sbjct: 178 AARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMG 237

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C   V +++ +++G C    +  A  L   M+ +G  P+ + +  L  GL    QVE A 
Sbjct: 238 CSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEAR 297

Query: 295 KLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            +   + + N V  +T   R  +DG  K     EA EL+ T+    C  D   Y+ LI G
Sbjct: 298 TMLGRVPELNVVLFNTVIGRCLLDGKLK-----EAAELYETMGSKGCPPDAHTYSILIHG 352

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCK GRL  A++L R +      P++VTY+I++   C +G  D  R +   M +  +  N
Sbjct: 353 LCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMN 412

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +  ++ +I    +       +  + +MK     PD    + ++  L  N
Sbjct: 413 LEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNN 461


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 239/490 (48%), Gaps = 51/490 (10%)

Query: 2   GRVSHGFVVLGRIL------KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           G  S G V  GR L      K C  P+ V + ++I G C    I  A  +F +L++ G  
Sbjct: 214 GMCSEGKVEEGRKLIEDRWGKGC-VPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFM 272

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEM-----------------ANGNGEFGVV---- 94
           P + T+ T++NG C+    + +  L EE+                 A     F V     
Sbjct: 273 PTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAES 332

Query: 95  --------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                   C+P+  TY  +I+ LCKEG  + A  LL +   K +    ++Y  +I+ +C 
Sbjct: 333 IRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCK 392

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           +K+++ A +L +++ ++G +P++VT+ +++  L  +G MD+A  +   +I  GV PDA  
Sbjct: 393 SKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAI 452

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YN L+ G C TGR   AK LF  M         + Y+ LI+G+ ++ + + A  +++  +
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSV 512

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            KG+K DVV HN +  G      ++ A    + M    +  D +TY T IDG  K   + 
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            A+++F  +   KC+ ++  Y SLI+G C  G   +A E F+ +    LVPNVVTY+ +I
Sbjct: 573 TAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLI 632

Query: 387 GGLCNDGQ-MDKARDLFLDMEENAVVPNVITFDMLIRGFIR------INEPSK------- 432
                +   ++KA   +  M  N  VPN +TF+ L++GF++      + EP         
Sbjct: 633 RSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSF 692

Query: 433 -VIELLHKMK 441
              E  H+MK
Sbjct: 693 LFFEFFHRMK 702



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 233/482 (48%), Gaps = 43/482 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +   +L+  +    R+ +A  ++ ++   G   D ++   +V G+C          L
Sbjct: 168 PDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKL 227

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E+       +G  C PN V Y TII G CK G ++ AK +  ++K K   P + T+ ++
Sbjct: 228 IED------RWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTM 281

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGV----------------------------------- 165
           I GFC   D+  + RL  E+ ++G+                                   
Sbjct: 282 INGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDC 341

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +P++ T+N++++ LCK GK + A+ LLD   + G+     +Y  L+  +C +   + A +
Sbjct: 342 KPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASK 401

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L + +   GCK  + +Y ILI+G   +  ++ A+++  +++ +G+ PD  I+N L  GL 
Sbjct: 402 LLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEFDI 344
           +  +   A  LF EM    +  D + Y T IDG  ++G   EA ++F TL + K  + D+
Sbjct: 462 KTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVF-TLSVEKGVKVDV 520

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             +N++I G C+SG L+ AL     +    LVP+  TYS +I G      M  A  +F D
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRD 580

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           ME+N   PNV+T+  LI GF    + S   E   +M+  +++P+    + ++   AK   
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESS 640

Query: 465 SL 466
           +L
Sbjct: 641 TL 642



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 176/367 (47%), Gaps = 5/367 (1%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N    ++ +  L +    ++ +++L  ++++N+K      + V+  +  +   ++A  ++
Sbjct: 98  NGFACSSFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIY 157

Query: 158 ---IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
              +E+ D    P+V+  N ++  + K+ ++++A ++ D M + G   D ++   ++ G 
Sbjct: 158 DYVVELYDS--VPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGM 215

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G+V   ++L       GC   +  Y+ +I GYCK  +IE A  ++ E+  KG  P +
Sbjct: 216 CSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTL 275

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
               T+  G  +      + +L +E++  G+    W     ID   ++G+ V+  E    
Sbjct: 276 ETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRW 335

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C+ DI  YN LI+ LCK G+ E+A  L        L+   ++Y+ +I   C   +
Sbjct: 336 IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKE 395

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
            D A  L L + E    P+++T+ +LI G +        + +  K+ +  V PDA+I ++
Sbjct: 396 YDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455

Query: 455 VVDLLAK 461
           ++  L K
Sbjct: 456 LMSGLCK 462



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 167/389 (42%), Gaps = 56/389 (14%)

Query: 2   GRVSHGFVVLG----------RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV 51
           G + HG VV G          +++    +PDA  +  L+ GLC   R + A  LF+++  
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLF---------------EEMANGNGEFGVVCE 96
               PD + Y TL++G  R+     A  +F                 M  G    G++ E
Sbjct: 479 RSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538

Query: 97  --------------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
                         P+  TY+TIIDG  K+  +  A ++   M+    KPNVVTYTS+I 
Sbjct: 539 ALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLIN 598

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK-NGKMDEASRLLDLMIQHGVR 201
           GFC   D++ A+  F EM  + + PNVVT+  ++    K +  +++A    +LM+ +   
Sbjct: 599 GFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCV 658

Query: 202 PDAFTYNTLLDGFC--LTGRV-------NHAK-----ELFVSMESMGCKHTVFSYSILIN 247
           P+  T+N LL GF    +GR        NH +     E F  M+S G      +Y+ ++ 
Sbjct: 659 PNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLV 718

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL-FDEMQRNGVA 306
             C +  ++ A  L   M+ KG  PD V    +  G   +   ++   + F  +   G+ 
Sbjct: 719 CLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKGLE 778

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
                 R     L K   I EA  + H +
Sbjct: 779 VAVRYSRVLEQHLPK-AVICEASTILHAM 806



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 126/299 (42%), Gaps = 58/299 (19%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V   ++IKG C    + EA A   ++      PD FTY+T+++G  +      A+ +F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M          C+PN VTYT++I+G C +G    A+E   +M+ +++ PNVVTYT++I
Sbjct: 579 RDMEKNK------CKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLI 632

Query: 142 RGFCYAKDWNEAKRLFIE-MMDQGVQPNVVTFNVIMDE---------------------- 178
           R F       E    + E MM     PN VTFN ++                        
Sbjct: 633 RSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSF 692

Query: 179 ---------------------------LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
                                      LC +G +  A  L D M++ G  PD  ++  +L
Sbjct: 693 LFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAIL 752

Query: 212 DGFCLTGRVNHAKEL-FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
            GFC+ G     + + F +++  G +  V  YS ++  +     I  A ++   M+ K 
Sbjct: 753 HGFCVVGNSKQWRNMDFRNLDEKGLEVAV-RYSRVLEQHLPKAVICEASTILHAMVEKA 810


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/407 (31%), Positives = 211/407 (51%), Gaps = 10/407 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
            TF  +++ LC+  +   A  L  ++      P+  TY T++ G C       AL++  E
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 539

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIR 142
           M    G       PN  TY T+I G CK G VD+A ++  +M  K  +KP  V Y ++I 
Sbjct: 540 MRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 594

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+C     + A      M+++GV   V T+N+++  L  +G+  EA  L++ M   G+ P
Sbjct: 595 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 654

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D FTYN L++G C  G V  A E+F +M   G + TV +Y+ LI    K  +++    L+
Sbjct: 655 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 714

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            E + +GI+PD+V++N L         ++RAF++  EM++  +A D  TY T + GLC  
Sbjct: 715 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 774

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G + EA +L   +     + D+  YN+LI G    G ++ AL +   +      P ++TY
Sbjct: 775 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 834

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           + +I GLC +GQ D A ++  +M EN + P+  T+  LI G    +E
Sbjct: 835 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 215/432 (49%), Gaps = 19/432 (4%)

Query: 42  AAALFT---KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           A ALF    +LR+  C     T+  ++  LC       AL L  +M            PN
Sbjct: 467 AFALFADMFRLRLPLC---TTTFNIMLRHLCSAGKPARALELLRQMP----------RPN 513

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            VTY T+I G C  G V  A +++ +M+++  I PN  TY +VI G+C     +EA ++F
Sbjct: 514 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 573

Query: 158 IEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            EM+ +G V+P  V +N ++   C  GK+D A    D M++ GV     TYN L+    +
Sbjct: 574 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 633

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR   A EL   M   G    VF+Y+ILING+CK   ++ AL ++  M  +G++  VV 
Sbjct: 634 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 693

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +  L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   + 
Sbjct: 694 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 753

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +   D   YN+L+ GLC  GR++ A +L   +    + P++VTY+ +I G    G + 
Sbjct: 754 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI-VSIV 455
            A  +  +M      P ++T++ LI+G  +  +      ++ +M E  + PD S  +S++
Sbjct: 814 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873

Query: 456 VDLLAKNEISLN 467
             L  ++E +++
Sbjct: 874 EGLTTEDERAID 885



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 190/382 (49%), Gaps = 6/382 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPDVFTYTTLVNGLCRTS 72
           +L+    P+AVT+ ++I G C+  R+  A  +  ++R   G  P+ +TY T+++G C+  
Sbjct: 505 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 564

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ +F+EM    GE     +P  V Y  +I G C +G +D A     +M ++ +  
Sbjct: 565 RVDEAVKVFDEMLT-KGEV----KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM 619

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            V TY  ++          EA  L  EM  +G+ P+V T+N++++  CK G + +A  + 
Sbjct: 620 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 679

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M + GVR    TY  L+      G+V    +LF      G +  +  Y+ LIN +  +
Sbjct: 680 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 739

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             I+ A  +  EM  K I PD V +NTL  GL  + +V+ A KL DEM   G+  D  TY
Sbjct: 740 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 799

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I G    G + +A+ + + +        +  YN+LI GLCK+G+ + A  + + +  
Sbjct: 800 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 859

Query: 373 GVLVPNVVTYSIMIGGLCNDGQ 394
             + P+  TY  +I GL  + +
Sbjct: 860 NGITPDDSTYISLIEGLTTEDE 881



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 166/320 (51%), Gaps = 7/320 (2%)

Query: 1   MGRVSHGFVVLGRIL-KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +GRV     V   +L K    P+AV + +LI G C + ++  A     ++   G    V 
Sbjct: 563 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 622

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY  LV+ L        A  L EEM       G    P+  TY  +I+G CKEG V KA 
Sbjct: 623 TYNLLVHALFMDGRGTEAYELVEEMG------GKGLAPDVFTYNILINGHCKEGNVKKAL 676

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+   M  + ++  VVTYT++I          E  +LF E + +G++P++V +N +++  
Sbjct: 677 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 736

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
             +G +D A  ++  M +  + PD  TYNTL+ G CL GRV+ A++L   M   G +  +
Sbjct: 737 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDL 796

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+GY    +++ AL + +EM++KG  P ++ +N L  GL +  Q + A  +  E
Sbjct: 797 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 856

Query: 300 MQRNGVAADTWTYRTFIDGL 319
           M  NG+  D  TY + I+GL
Sbjct: 857 MVENGITPDDSTYISLIEGL 876



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 22/214 (10%)

Query: 257 GALSLYSEMLS--KGIKPDVVIH----------NTLFVGLFEIHQVERAFKLFDEMQRNG 304
            AL+L+  +LS  K + P  V+           N L      +     + +L+  M+   
Sbjct: 388 AALALFKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLS 447

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +   T +    +  L        A  LF  +  L+       +N ++  LC +G+   AL
Sbjct: 448 LPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 503

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDMLIRG 423
           EL R +P     PN VTY+ +I G C+ G++  A D+  +M E   + PN  T+  +I G
Sbjct: 504 ELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISG 559

Query: 424 FIRINEPSKVIELLHKM-KEINVMPDASIVSIVV 456
           + ++    + +++  +M  +  V P+A + + ++
Sbjct: 560 WCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 593



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 41/146 (28%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++G + K    PD VT+ +L++GLC   R+ EA  L  ++   G +PD+ TY
Sbjct: 740 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 799

Query: 62  TTLV-----------------------------------NGLCRTSHTIVALNLFEEMAN 86
            TL+                                    GLC+      A N+ +EM  
Sbjct: 800 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV- 858

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKE 112
              E G+   P+  TY ++I+GL  E
Sbjct: 859 ---ENGIT--PDDSTYISLIEGLTTE 879


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 221/451 (49%), Gaps = 9/451 (1%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC--EPDVFTYTTLVN 66
            V G +L+    P  VT+ +L+     E R  EA+ L  ++   G     +  T+  +++
Sbjct: 223 AVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVIS 282

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            L R  H   A+ L + M           + ++ TY  +I  L + GFV KA+ L ++M+
Sbjct: 283 FLAREGHLENAVKLVDSMRLSK-------KASSFTYNPLITALLERGFVRKAEALQMEME 335

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++ I P VVTY ++I G    +    A+  F EM   G+ P+V+T+N +++  CK G + 
Sbjct: 336 NEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLK 395

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA  LL  + + G+ P   TYNTL+DG+C  G +  A+ L   M   GC   V +Y+IL+
Sbjct: 396 EALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILM 455

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           NG  K + +  A   + EMLSKG++PD   +NT       +     AF+L + M   G+ 
Sbjct: 456 NGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIY 515

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            DT TY   IDGLCK G + +A  L   +     + D   Y  LI   C+ G L  A +L
Sbjct: 516 PDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKL 575

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
              +    L P+VVTY+I++   C  G +  A   F  M +  + PN IT+++LI     
Sbjct: 576 LNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCM 635

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVD 457
                      H+M E  + P+    ++++D
Sbjct: 636 TGRTPLAFRHFHEMLERGLAPNKYTYTLLID 666



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 196/403 (48%), Gaps = 6/403 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            + T+  LI  L     + +A AL  ++   G  P V TY  +++GL +      A   F
Sbjct: 307 SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKF 366

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM       G++  P+ +TY ++++  CK G + +A  LL  ++   + P V+TY ++I
Sbjct: 367 AEMR----AMGLL--PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLI 420

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C   D  EA+RL  EM++QG  P+V T+ ++M+   K   +  A    D M+  G++
Sbjct: 421 DGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQ 480

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD F YNT +           A +L   M   G      +Y+++I+G CK   ++ A  L
Sbjct: 481 PDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRL 540

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
            ++M+S G++PD + +  L     E   +  A KL + M  +G+     TY   +   C+
Sbjct: 541 KTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCR 600

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G +  A   F  +  +  E +   YN LI  LC +GR  +A   F  +    L PN  T
Sbjct: 601 RGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYT 660

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           Y+++I G C +G    A  L+ +M +N + P+  T + L +GF
Sbjct: 661 YTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 173/353 (49%), Gaps = 7/353 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T+ SL+   C    + EA  L   LR  G  P V TY TL++G CR      A  L
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            EEM          C P+  TYT +++G  K   +  A+E   +M  K ++P+   Y + 
Sbjct: 436 KEEMVEQG------CFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTR 489

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I           A +L   MM +G+ P+ VT+NVI+D LCK G + +A RL   M+  G+
Sbjct: 490 ICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGL 549

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD  TY  L+   C  G +  A++L   M S G + +V +Y+IL++  C+   +  A  
Sbjct: 550 QPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYG 609

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            + +ML  GI+P+ + +N L   L    +   AF+ F EM   G+A + +TY   IDG C
Sbjct: 610 WFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNC 669

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + G   +A+ L+  +       D   +N+L  G    G +  A+E   ++  G
Sbjct: 670 REGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF-DEGHMYHAIEYMENIVLG 721



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 151/316 (47%), Gaps = 29/316 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +LG + ++   P  +T+ +LI G C    + EA  L  ++   GC PDV TY
Sbjct: 392 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTY 451

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGE---FGV---VCE------------------- 96
           T L+NG  +  +  +A   F+EM +   +   F     +C                    
Sbjct: 452 TILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMML 511

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               P+TVTY  IIDGLCK G +  AK L  +M    ++P+ +TYT +I   C      E
Sbjct: 512 KGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLRE 571

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A++L   M+  G+QP+VVT+ +++   C+ G +  A      M+  G+ P+  TYN L+ 
Sbjct: 572 ARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 631

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C+TGR   A   F  M   G     ++Y++LI+G C+      A+ LY EM   GI P
Sbjct: 632 ALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 691

Query: 273 DVVIHNTLFVGLFEIH 288
           D   HN LF G  E H
Sbjct: 692 DYCTHNALFKGFDEGH 707



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 161/334 (48%), Gaps = 3/334 (0%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+V     V+R    A  W++ + ++ EM+   V+P +VT+N ++D   K G+ DEAS
Sbjct: 198 VAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 190 RLLDLMIQHG--VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
            LL  M   G     +  T+N ++      G + +A +L  SM  +  K + F+Y+ LI 
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR-LSKKASSFTYNPLIT 316

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
              +   +  A +L  EM ++GI P VV +N +  GL +  Q E A   F EM+  G+  
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLP 376

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D  TY + ++  CK G + EA+ L   LR       +  YN+LIDG C+ G L  A  L 
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLK 436

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +      P+V TY+I++ G      +  AR+ F +M    + P+   ++  I   + +
Sbjct: 437 EEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTL 496

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +      +L   M    + PD    ++++D L K
Sbjct: 497 SSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCK 530



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 149/318 (46%), Gaps = 10/318 (3%)

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
            GV P+V   N ++  L    + D+   +   M+Q  V P   TYNTLLD F   GR + 
Sbjct: 196 HGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDE 255

Query: 223 AKELFVSMESMGCKHTV--FSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNT 279
           A  L   ME+ G   ++   +++++I+   +   +E A+ L   M LSK  K     +N 
Sbjct: 256 ASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK--KASSFTYNP 313

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   L E   V +A  L  EM+  G+     TY   I GL K      A   F  +R + 
Sbjct: 314 LITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMG 373

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D+  YNSL++  CK+G L+ AL L   L    L P V+TY+ +I G C  G + +AR
Sbjct: 374 LLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEAR 433

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            L  +M E    P+V T+ +L+ G  ++   +   E   +M    + PD    +  +   
Sbjct: 434 RLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRI--- 490

Query: 460 AKNEISLNSLP-SFTVHE 476
              E++L+S P +F + E
Sbjct: 491 -CAELTLSSTPMAFQLRE 507


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 229/470 (48%), Gaps = 25/470 (5%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           + H    L  +++S + PDA TF SLI G C   ++  A  LF K+ + G   D  +Y  
Sbjct: 145 LRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAA 204

Query: 64  LVNGLCRTSHTIVALNLFEEMANGN----------------GEFGVV---------CEPN 98
           L+ G C T     AL LF E+   +                GE G+            P 
Sbjct: 205 LIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPA 264

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
           T  Y  ++D  C+E   ++A+++L +M D  + P  VT T+V+  +C     + A R+F 
Sbjct: 265 TRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFE 324

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            M  +G +PNV T+N ++   C  GK+ +A  LLD M + GV PD  TYN L+ G C+ G
Sbjct: 325 SMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDG 384

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            +  A  L   ME  G     ++Y++LI+  CK  +++ A SL+  +  +GI+P+ V  N
Sbjct: 385 HIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFN 444

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           T+  GL +  + + A    ++M   G A DT+TY  FI+ LCK     E +     +   
Sbjct: 445 TVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQK 504

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             +     Y  +ID L K     +A  ++  +      P+VVTY+  +   CN+G++ +A
Sbjct: 505 DVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEA 564

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            ++ ++M++  ++ + + ++ LI G   I +    + +L  M  +  MP+
Sbjct: 565 ENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPN 614



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 220/475 (46%), Gaps = 22/475 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G  +L ++ +  + P    + +L+   C E +  EA  +  ++   G  P   T T
Sbjct: 245 RGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCT 304

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VN  CR      A+ +FE M          CEPN  TY  ++ G C  G V KA  LL
Sbjct: 305 AVVNAYCREGRMSGAVRVFESMKLKG------CEPNVWTYNAMVQGFCNVGKVYKAMALL 358

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM++  ++P+VVTY  +IRG C       A RL   M   G+  +  T+NV++D LCK 
Sbjct: 359 DQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKT 418

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+DEA  L D +   G+RP++ T+NT+++G C  G+ + A      M S GC    ++Y
Sbjct: 419 GKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTY 478

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S  I   CK K     LS   EML K +KP  V +  +   LF+      A +++ +M  
Sbjct: 479 SPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVS 538

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G + D  TY T +   C  G + EA  +   ++      D  AYN+LIDG    G+ + 
Sbjct: 539 LGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDH 598

Query: 363 ALELFRSLPCGVLVPNVVTYSIM----------------IGGLCNDGQMDKARDLFLDME 406
           A+ + + +     +PN  T+ I+                   +    ++    +LF  M+
Sbjct: 599 AVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMK 658

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +N+V  +   +  ++ GF       +V  L+  MKE ++  +  I + +V+   K
Sbjct: 659 KNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCK 713



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 198/417 (47%), Gaps = 12/417 (2%)

Query: 7   GFVVLGRI------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           GF   GR+       +    PD  T  +L+KGLC   R  E   +  K++  G  P    
Sbjct: 208 GFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRA 267

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  LV+  CR      A  +  EM +     G+V  P  VT T +++  C+EG +  A  
Sbjct: 268 YAALVDLWCREQKAEEAEKMLNEMFDN----GLV--PCAVTCTAVVNAYCREGRMSGAVR 321

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   MK K  +PNV TY ++++GFC      +A  L  +M + GV+P+VVT+N+++   C
Sbjct: 322 VFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQC 381

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G ++ A RLL LM  +G+  D +TYN L+D  C TG+V+ A  LF  +E  G +    
Sbjct: 382 IDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSV 441

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ +ING CK  + + A +   +M+S G  PD   ++     L +           DEM
Sbjct: 442 TFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEM 501

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +  V   T  Y   ID L K      A  ++  +  L C  D+  Y + +   C  GRL
Sbjct: 502 LQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRL 561

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
             A  +   +  G ++ + + Y+ +I G  + G+ D A  +   M   A +PN  TF
Sbjct: 562 HEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTF 618



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 198/427 (46%), Gaps = 10/427 (2%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           T+ +L+    R + T + L LF  M +          P   TY  +I  LC+   +  A+
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPP-----APTGATYNALIRALCRRADLRHAQ 149

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
             L  M     +P+  T+ S+I G+C  +  + A+ LF +M  +G   + V++  +++  
Sbjct: 150 RYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGF 209

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+ G++DEA  L   + Q    PD +T+  L+ G C   R      +   M+ +G +   
Sbjct: 210 CETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPAT 265

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ L++ +C+ ++ E A  + +EM   G+ P  V    +        ++  A ++F+ 
Sbjct: 266 RAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFES 325

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+  G   + WTY   + G C  G + +A+ L   +R    E D+  YN LI G C  G 
Sbjct: 326 MKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGH 385

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +E A  L R +    L  +  TY+++I  LC  G++D+A  LF  +E   + PN +TF+ 
Sbjct: 386 IESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT 445

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           +I G  +  +       L KM      PD    S  ++ L K + S   L SF     Q+
Sbjct: 446 VINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL-SFIDEMLQK 504

Query: 480 EVDESNV 486
           +V  S V
Sbjct: 505 DVKPSTV 511



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 221/482 (45%), Gaps = 28/482 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L ++ +    PD VT+  LI+G C +  I  A  L   +   G   D +T
Sbjct: 348 VGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYT 407

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++ LC+T     A +LF+ +     E+  +  PN+VT+ T+I+GLCK G  D A  
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGL-----EYRGI-RPNSVTFNTVINGLCKGGKFDVACT 461

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +M      P+  TY+  I   C  K   E      EM+ + V+P+ V + +++D L 
Sbjct: 462 FLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLF 521

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K      A+R+   M+  G  PD  TY T +  +C  GR++ A+ + + M+  G      
Sbjct: 522 KERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAM 581

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV------------------ 282
           +Y+ LI+G+    + + A+++   M      P+   H T F+                  
Sbjct: 582 AYNTLIDGHTSIGKTDHAVTILKHMTGVASMPN---HFTFFILLRHLLQRRLAEDVPLKT 638

Query: 283 -GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             +++  ++   F+LF+ M++N V +    Y   ++G  +   + E   L   ++     
Sbjct: 639 TSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLP 698

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            +   Y SL++  CK      A  L  S+     +PN+++Y  ++ G   +GQ D+A+++
Sbjct: 699 LNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEI 758

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F  +       + I + ++I G IR   P    +++  ++++   P     +++ + L+ 
Sbjct: 759 FRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELST 818

Query: 462 NE 463
            E
Sbjct: 819 RE 820


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 229/438 (52%), Gaps = 6/438 (1%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  L++  C   +  EA   F  ++  G  P++ T   +++   + + T +A  L+ EM 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM- 207

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                F +    +  T+  +I+ LCKEG + KAKE +  M+   +KPNVVTY ++I G C
Sbjct: 208 -----FRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
               +  A+ +F  M D+G++P+  T+N  +  LCK G+++EAS L+  M++ G+ P+A 
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN L+DG+C  G ++ A      M S G   ++ +Y++ I+       +  A ++  EM
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             KG+ PD V HN L  G       +RAF L DEM   G+     TY + I  L K   +
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA  LF  ++      DI  +N+LIDG C +G ++ A +L + +    ++P+ +TY+ +
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + G C +G++++AR L  +M+   + P+ I+++ LI G+ +  +      +  +M     
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGF 562

Query: 446 MPDASIVSIVVDLLAKNE 463
            P     + ++  L KN+
Sbjct: 563 DPTILTYNALIQGLCKNQ 580



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 219/429 (51%), Gaps = 6/429 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R    +V+   + +        TF  +I  LC E ++ +A      +   G +P+V T
Sbjct: 194 LNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVT 253

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++G C       A  +F+ M +         EP+  TY + I GLCKEG +++A  
Sbjct: 254 YNTIIHGHCLRGKFQRARVIFQTMKDKG------LEPDCYTYNSFISGLCKEGRLEEASG 307

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+ +M +  + PN VTY ++I G+C   D ++A     EM+ +G+  ++VT+N+ +  L 
Sbjct: 308 LICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALF 367

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+M +A  ++  M + G+ PDA T+N L++G+C  G    A  L   M   G + T+ 
Sbjct: 368 MEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLV 427

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI    K   ++ A +L+S++  +G+ PD+++ N L  G      ++RAF+L  EM
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               V  D  TY T + G C+ G + EA +L   ++    + D  +YN+LI G  K G +
Sbjct: 488 DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDM 547

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +   +      P ++TY+ +I GLC + + + A +L  +M    + P+  T+  +
Sbjct: 548 KDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSI 607

Query: 421 IRGFIRINE 429
           I     +++
Sbjct: 608 IEAMETVDD 616



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 185/377 (49%), Gaps = 3/377 (0%)

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
           S T     +F+E+A        V    T+ +  ++   C+    ++A E    +K+K   
Sbjct: 122 SPTCTNRTIFDELALARDR---VDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFV 178

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           PN+ T   ++  F        A  L+ EM    ++ ++ TFN++++ LCK GK+ +A   
Sbjct: 179 PNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEF 238

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           +  M   GV+P+  TYNT++ G CL G+   A+ +F +M+  G +   ++Y+  I+G CK
Sbjct: 239 IGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCK 298

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              +E A  L  +ML  G+ P+ V +N L  G      +++A+   DEM   G+ A   T
Sbjct: 299 EGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVT 358

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y  FI  L   G + +A  +   +R      D   +N LI+G C+ G  + A  L   + 
Sbjct: 359 YNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMV 418

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P +VTY+ +I  L    +M +A  LF  +++  ++P++I F+ LI G        
Sbjct: 419 GKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNID 478

Query: 432 KVIELLHKMKEINVMPD 448
           +  +LL +M  + V+PD
Sbjct: 479 RAFQLLKEMDNMKVLPD 495



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 6/256 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     ++  + +    PDAVT   LI G C       A  L  ++   G +P + TY
Sbjct: 370 GRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTY 429

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L+  L + +    A  LF ++     + G++  P+ + +  +IDG C  G +D+A +L
Sbjct: 430 TSLIYVLGKRNRMKEADALFSKIQ----QEGLL--PDIIVFNALIDGHCANGNIDRAFQL 483

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  + P+ +TY ++++G+C      EA++L  EM  +G++P+ +++N ++    K
Sbjct: 484 LKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSK 543

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G M +A R+ D M+  G  P   TYN L+ G C      HA+EL   M S G      +
Sbjct: 544 RGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDST 603

Query: 242 YSILINGYCKNKEIEG 257
           Y  +I       ++EG
Sbjct: 604 YLSIIEAMETVDDLEG 619



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 132/289 (45%), Gaps = 35/289 (12%)

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
            + F++++   C+  K +EA     L+ + G  P+  T N +L  F    R   A  L+ 
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M  M  + ++++++I+IN  CK  +++ A      M + G+KP+VV             
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVV------------- 252

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
                                 TY T I G C  G    A  +F T++    E D   YN
Sbjct: 253 ----------------------TYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYN 290

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           S I GLCK GRLE A  L   +  G LVPN VTY+ +I G CN G +DKA     +M   
Sbjct: 291 SFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISK 350

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            ++ +++T+++ I              ++ +M+E  +MPDA   +I+++
Sbjct: 351 GIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILIN 399



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 120/229 (52%), Gaps = 3/229 (1%)

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           EL ++ + +  K T+  + +L+  YC+ K+   AL  +  +  KG  P++   N +    
Sbjct: 133 ELALARDRVDAKTTLI-FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLF 191

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            ++++ + A+ L+ EM R  + +  +T+   I+ LCK G + +A E    +  L  + ++
Sbjct: 192 LKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNV 251

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN++I G C  G+ + A  +F+++    L P+  TY+  I GLC +G++++A  L   
Sbjct: 252 VTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICK 311

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           M E  +VPN +T++ LI G+    +  K      +M    +M  AS+V+
Sbjct: 312 MLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIM--ASLVT 358


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 230/432 (53%), Gaps = 16/432 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   GF    R     +   A++   L+  L  ++R  +   L+ ++     +P+VFT+ 
Sbjct: 168 RFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFN 227

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK---EGFVDKAK 119
            ++N LC+T     A ++ E+M      +G    PN V+Y T+IDG CK    G + KA 
Sbjct: 228 VVINALCKTGKMNKARDVMEDMK----VYGY--SPNVVSYNTLIDGYCKLGGNGKMYKAD 281

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +L +M +  + PN+ T+  +I GF    +   + ++F EM+DQ V PNV+T+N +++ L
Sbjct: 282 AVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGL 341

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C  GK++EA  + D M+  GV+P+  TY++L++GFC  G +  A ++F S++  G + T 
Sbjct: 342 CNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTT 401

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y++LI+ YCK  +I+   +L  EM  +GI PDV  +N L  GL     +E A KLFD+
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           +   G+  D  T+   ++G C  G   +A  L   +  +  +     YN ++ G CK G 
Sbjct: 462 LTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGN 520

Query: 360 LEIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF- 417
           L+ A  +   +     L  NV +Y++++ G    G+++ A  L  +M E  +VPN IT+ 
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580

Query: 418 ----DMLIRGFI 425
               +M+ +GF+
Sbjct: 581 IVKEEMVDKGFV 592



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 171/322 (53%), Gaps = 4/322 (1%)

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            L K+      + L  +M  + I+PNV T+  VI   C     N+A+ +  +M   G  P
Sbjct: 197 ALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSP 256

Query: 168 NVVTFNVIMDELCK---NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           NVV++N ++D  CK   NGKM +A  +L  M+++ V P+  T+N L+DGF     +  + 
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSL 316

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           ++F  M        V +Y+ LING C   +I  A+ +  +M+S G++P+++ +++L  G 
Sbjct: 317 KVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGF 376

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +   ++ A  +FD ++  G    T  Y   ID  CK G I +   L   +       D+
Sbjct: 377 CKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN LI GLC++G +E A +LF  L    L P++VT+ I++ G C+ G+  KA  L  +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKE 495

Query: 405 MEENAVVPNVITFDMLIRGFIR 426
           M +  + P  +T++++++G+ +
Sbjct: 496 MSKMGLKPRHLTYNIMMKGYCK 517



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 168/325 (51%), Gaps = 8/325 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     VL  ++++  +P+  TF  LI G   +  +  +  +F ++      P+V TY
Sbjct: 275 GKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITY 334

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC       A+ + ++M +     GV  +PN +TY ++I+G CK G + +A ++
Sbjct: 335 NSLINGLCNGGKINEAIGMRDKMVSA----GV--QPNLITYHSLINGFCKNGMMKEALDM 388

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +K +  +P    Y  +I  +C     ++   L  EM  +G+ P+V T+N ++  LC+
Sbjct: 389 FDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG ++ A +L D +   G+ PD  T++ L++G+C  G    A  L   M  MG K    +
Sbjct: 449 NGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLT 507

Query: 242 YSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           Y+I++ GYCK   ++ A ++ ++M   + ++ +V  +N L  G  +  ++E A  L +EM
Sbjct: 508 YNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYI 325
              G+  +  TY    + +   G++
Sbjct: 568 LEKGLVPNRITYEIVKEEMVDKGFV 592



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 162/322 (50%), Gaps = 39/322 (12%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G + + ++   +M  L K  +  +   L   MI+  ++P+ FT+N +++  C TG++N A
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCK---NKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           +++   M+  G    V SY+ LI+GYCK   N ++  A ++  EM+   + P++   N L
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNIL 302

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G ++   +  + K+F EM    V  +  TY + I+GLC  G I EA+ +   +     
Sbjct: 303 IDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGV 362

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLP------------------CGV-------- 374
           + ++  Y+SLI+G CK+G ++ AL++F S+                   C +        
Sbjct: 363 QPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFA 422

Query: 375 ---------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
                    +VP+V TY+ +I GLC +G ++ A+ LF D   N  +P+++TF +L+ G+ 
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTNKGLPDLVTFHILMEGYC 481

Query: 426 RINEPSKVIELLHKMKEINVMP 447
              E  K   LL +M ++ + P
Sbjct: 482 SRGESRKAAMLLKEMSKMGLKP 503



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 132/277 (47%), Gaps = 24/277 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++    +  +++ +   P+ +T+ SLI G C    + EA  +F  ++  G  P    Y
Sbjct: 345 GKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMY 404

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++  C+         L EEM       G+V  P+  TY  +I GLC+ G ++ AK+L
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMERE----GIV--PDVGTYNCLIAGLCRNGNIEAAKKL 458

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             Q+ +K + P++VT+  ++ G+C   +  +A  L  EM   G++P  +T+N++M   CK
Sbjct: 459 FDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCK 517

Query: 182 NGKMDEASRLLDLM-IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            G +  A+ +   M  +  +R +  +YN LL G+   G++  A  L   M   G      
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRI 577

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           +Y I+       KE         EM+ KG  PD+  H
Sbjct: 578 TYEIV-------KE---------EMVDKGFVPDIEGH 598



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 129/268 (48%), Gaps = 3/268 (1%)

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +G +  A +   L+       R    + L+  M     +  VF+++++IN  CK  ++  
Sbjct: 182 YGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK---LFDEMQRNGVAADTWTYRT 314
           A  +  +M   G  P+VV +NTL  G  ++    + +K   +  EM  N V+ +  T+  
Sbjct: 242 ARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNI 301

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            IDG  K+  +  ++++F  +       ++  YNSLI+GLC  G++  A+ +   +    
Sbjct: 302 LIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAG 361

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + PN++TY  +I G C +G M +A D+F  ++     P    ++MLI  + ++ +     
Sbjct: 362 VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGF 421

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
            L  +M+   ++PD    + ++  L +N
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRN 449



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 3/240 (1%)

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           E F      G K +  S   L+    K         LY EM+ + I+P+V   N +   L
Sbjct: 174 EAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINAL 233

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK---NGYIVEAVELFHTLRILKCE 341
            +  ++ +A  + ++M+  G + +  +Y T IDG CK   NG + +A  +   +   +  
Sbjct: 234 CKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVS 293

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  +N LIDG  K   L  +L++F+ +    ++PNV+TY+ +I GLCN G++++A  +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGM 353

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              M    V PN+IT+  LI GF +     + +++   +K     P   + ++++D   K
Sbjct: 354 RDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCK 413



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 6/269 (2%)

Query: 209 TLLDGFCLTGRVNHAKELF--VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           + LDGF   G  +    +F  +SM    C +++ +  +L+  Y  N   E     +    
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSG 180

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G K   +    L V L + ++      L+ EM R  +  + +T+   I+ LCK G + 
Sbjct: 181 YYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCK---SGRLEIALELFRSLPCGVLVPNVVTYS 383
           +A ++   +++     ++ +YN+LIDG CK   +G++  A  + + +    + PN+ T++
Sbjct: 241 KARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFN 300

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           I+I G   D  +  +  +F +M +  V+PNVIT++ LI G     + ++ I +  KM   
Sbjct: 301 ILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSA 360

Query: 444 NVMPDASIVSIVVDLLAKNEISLNSLPSF 472
            V P+      +++   KN +   +L  F
Sbjct: 361 GVQPNLITYHSLINGFCKNGMMKEALDMF 389



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 8/184 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++  GF +   + +    PD  T+  LI GLC    I  A  LF +L   G  PD+ T
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVT 472

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  L+ G C    +  A  L +EM+    + G+  +P  +TY  ++ G CKEG +  A  
Sbjct: 473 FHILMEGYCSRGESRKAAMLLKEMS----KMGL--KPRHLTYNIMMKGYCKEGNLKAATN 526

Query: 121 LLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +  QM K++ ++ NV +Y  +++G+       +A  L  EM+++G+ PN +T+ ++ +E+
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEM 586

Query: 180 CKNG 183
              G
Sbjct: 587 VDKG 590



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 46/254 (18%)

Query: 261 LYSEMLSKGIKPDVVI-HNTLFVGLFEIH-QVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+ +++S  + PD+ + + T  V   +I   +E  FKL   +     A      R+F+DG
Sbjct: 70  LFRQLISSELNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLAN---AKRYSKIRSFLDG 126

Query: 319 LCKNGYIVEAVELFHTLRILK--CEFDIRAYNSLIDGLCKSGRLEIALELFR-------- 368
             +NG   +   +FH + +    C   I A + L+     + R E+  E F+        
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSGYYGYK 185

Query: 369 --SLPCGVLV-------------------------PNVVTYSIMIGGLCNDGQMDKARDL 401
             ++ C  L+                         PNV T++++I  LC  G+M+KARD+
Sbjct: 186 LSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE---LLHKMKEINVMPDASIVSIVVDL 458
             DM+     PNV++++ LI G+ ++    K+ +   +L +M E  V P+ +  +I++D 
Sbjct: 246 MEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDG 305

Query: 459 LAKNEISLNSLPSF 472
             K++    SL  F
Sbjct: 306 FWKDDNLPGSLKVF 319


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 234/465 (50%), Gaps = 39/465 (8%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+T LIKGLC E RI  A  +  ++ + G  P V+TY  +++G C++     AL + + +
Sbjct: 197 TYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KAL 255

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
              NG     C P+  TY  +I GLC E   D+A+ELL     +   P V+T+T++I G+
Sbjct: 256 MERNG-----CNPDDWTYNILIYGLCGEK-PDEAEELLNDAIVRGFTPTVITFTNIINGY 309

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A+  ++A R+   M+    + ++  + V+++ L K  +  EA   +  M  +G+ P+ 
Sbjct: 310 CKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNV 369

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             Y +++DG+C  G+V  A E+F  ME  GC+   ++YS LI G  +++++  A++L ++
Sbjct: 370 VIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 429

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M   GI P V+ + TL  G  + H+ + AF+LF+ M++NG+  D   Y      LCK+G 
Sbjct: 430 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGR 489

Query: 325 IVEAVEL---------------------------FHTLRILK-----CEFDIRAYNSLID 352
             EA                              F  + I K     C+ D   Y+ L+ 
Sbjct: 490 AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQ 549

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            LCK  +L  AL +   +    +  N+V Y+I+I  +  +G+ D A+ +F +M  +   P
Sbjct: 550 ALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 609

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +  T+ + I  + +I +  +   L+ +M+   V PD    ++ ++
Sbjct: 610 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFIN 654



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 226/516 (43%), Gaps = 97/516 (18%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE----------------------- 55
           FTP  +TFT++I G C   RI +A  + T +    C+                       
Sbjct: 295 FTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAK 354

Query: 56  ------------PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
                       P+V  YT++++G C+      AL +F  M +        C PN  TY+
Sbjct: 355 ETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG------CRPNAWTYS 408

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           ++I GL ++  + KA  L+ +M++  I P V+TYT++I+G C   +++ A RLF EMM+Q
Sbjct: 409 SLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF-EMMEQ 467

Query: 164 -GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
            G+ P+   +NV+   LCK+G+ +EA   L   ++ GV     TY +L+DGF   G  + 
Sbjct: 468 NGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDF 524

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS---------------------- 260
           A  L   M + GCK   ++YS+L+   CK K++  ALS                      
Sbjct: 525 AAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIIS 584

Query: 261 -------------LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
                        +++EM+S G KP    +        +I Q+E A  L  EM+R+GVA 
Sbjct: 585 EMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAP 644

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN---------SLID------ 352
           D  TY  FI+G    GY+  A      +    CE +   Y          SL+D      
Sbjct: 645 DVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDT 704

Query: 353 -GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            G+     L+   +L   +    L P  VTYS +I G C   ++++A  LF  M    + 
Sbjct: 705 SGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDIS 764

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           PN   + MLI+    I    K +  +  M E    P
Sbjct: 765 PNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQP 800



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 208/420 (49%), Gaps = 25/420 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A T++SLI GL  + ++ +A AL TK++  G  P V TYTTL+ G C+      A  L
Sbjct: 402 PNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRL 461

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE M   NG       P+   Y  +   LCK G  ++A   L++   K +    VTYTS+
Sbjct: 462 FEMMEQ-NG-----LTPDEQAYNVLTHALCKSGRAEEAYSFLVR---KGVVLTKVTYTSL 512

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GF  A + + A  L  +M+++G + +  T++V++  LCK  K++EA  +LD M   GV
Sbjct: 513 VDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGV 572

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + +   Y  ++      G+ +HAK +F  M S G K +  +Y++ I+ YCK  +IE A  
Sbjct: 573 KCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEH 632

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM   G+ PDVV +N    G   +  ++RAF     M       + WTY   +    
Sbjct: 633 LIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFL 692

Query: 321 K----NGYIVEAVELFHTL----------RILKCEFDIRA--YNSLIDGLCKSGRLEIAL 364
           K    + + V+   +++ +          R++K   +  A  Y+S+I G CK+ RLE A 
Sbjct: 693 KMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEAC 752

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    + PN   Y+++I   C+     KA     DM E    P++ ++  LI G 
Sbjct: 753 VLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGL 812



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 179/343 (52%), Gaps = 1/343 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C  N  +YT +I GLC+   V +A  LL+ M       N+ TYT +I+G C     + A+
Sbjct: 156 CRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGAR 215

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           R+  EM  +GV P+V T+N ++D  CK+G+M +A  +  LM ++G  PD +TYN L+ G 
Sbjct: 216 RVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGL 275

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   + + A+EL       G   TV +++ +INGYCK + I+ AL + + MLS   K D+
Sbjct: 276 C-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDL 334

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +  L   L +  + + A +   EM  NG+A +   Y + IDG CK G +  A+E+F  
Sbjct: 335 QAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRL 394

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C  +   Y+SLI GL +  +L  A+ L   +    + P V+TY+ +I G C   +
Sbjct: 395 MEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 454

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
            D A  LF  ME+N + P+   +++L     +     +    L
Sbjct: 455 FDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL 497



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 175/350 (50%), Gaps = 1/350 (0%)

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G + KA  LL+ M     + N  +YT +I+G C  +   EA  L + M+  G   N+ T+
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
            +++  LCK G++  A R+L+ M   GV P  +TYN ++DG+C +GR+  A  +   ME 
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            GC    ++Y+ILI G C  K  E A  L ++ + +G  P V+    +  G  +  +++ 
Sbjct: 259 NGCNPDDWTYNILIYGLCGEKPDE-AEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A ++   M  +    D   Y   I+ L K     EA E    +       ++  Y S+ID
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G CK G++  ALE+FR +      PN  TYS +I GL  D ++ KA  L   M+E+ + P
Sbjct: 378 GYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 437

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            VIT+  LI+G  + +E      L   M++  + PD    +++   L K+
Sbjct: 438 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKS 487



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 161/329 (48%), Gaps = 1/329 (0%)

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
           D  +A  L + M   G + N  ++ +++  LC+   + EA  LL +M+Q G   +  TY 
Sbjct: 140 DLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYT 199

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+ G C  GR++ A+ +   M   G   +V++Y+ +I+GYCK+  ++ AL + + M   
Sbjct: 200 LLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERN 259

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  PD   +N L  GL    + + A +L ++    G      T+   I+G CK   I +A
Sbjct: 260 GCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDA 318

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + +  ++    C+ D++AY  LI+ L K  R + A E    +    L PNVV Y+ +I G
Sbjct: 319 LRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDG 378

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C  G++  A ++F  ME     PN  T+  LI G I+  +  K + L+ KM+E  + P 
Sbjct: 379 YCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPG 438

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
               + ++    K     N+   F + EQ
Sbjct: 439 VITYTTLIQGQCKKHEFDNAFRLFEMMEQ 467



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 165/388 (42%), Gaps = 68/388 (17%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           VT+TSL+ G         AA L  K+   GC+ D +TY+ L+  LC+      AL++ ++
Sbjct: 507 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQ 566

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M       GV C  N V YT II  + KEG  D AK +  +M     KP+  TYT  I  
Sbjct: 567 MTLS----GVKC--NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISS 620

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA--------------- 188
           +C      EA+ L  EM   GV P+VVT+NV ++     G MD A               
Sbjct: 621 YCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPN 680

Query: 189 ------------------------------------SRLLDLMIQHGVRPDAFTYNTLLD 212
                                                +LL+ M++HG+ P A TY++++ 
Sbjct: 681 YWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIA 740

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           GFC   R+  A  LF  M           Y++LI   C  K    A+S  ++M+  G +P
Sbjct: 741 GFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQP 800

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLF------DEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +  ++ L VGL +    ++A  LF      ++   N VA     ++   DGL K G++ 
Sbjct: 801 HLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVA-----WKILNDGLLKAGHVD 855

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGL 354
              +L   +    C+ D   Y+ + D +
Sbjct: 856 FCSQLLSAMENRHCQIDSETYSMVTDNI 883



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 21/263 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF---GCEPD 57
           +G++     ++G + +    PD VT+   I G C     M+ A  F+ L+      CEP+
Sbjct: 624 IGQIEEAEHLIGEMERDGVAPDVVTYNVFING-CGHMGYMDRA--FSTLKRMIDASCEPN 680

Query: 58  VFTYTTLVNGLCRTS----HTI--------VALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
            +TY  L+    + S    H +        + L+   ++     + G+   P  VTY++I
Sbjct: 681 YWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGL--NPTAVTYSSI 738

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I G CK   +++A  L   M+ K+I PN   YT +I+  C  K + +A     +M++ G 
Sbjct: 739 IAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGF 798

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           QP++ +++ ++  LC  G  D+A  L  DL+       +   +  L DG    G V+   
Sbjct: 799 QPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCS 858

Query: 225 ELFVSMESMGCKHTVFSYSILIN 247
           +L  +ME+  C+    +YS++ +
Sbjct: 859 QLLSAMENRHCQIDSETYSMVTD 881


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 223/443 (50%), Gaps = 7/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V++TS+I  LC   R+ EA  LF ++      P  + Y T++ G         A  L
Sbjct: 148 PDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKL 207

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E +     E G  C P+ V++ +I+  L K+  VD+A  L   MK K+ +PN  TY  +
Sbjct: 208 LERLR----ERG--CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNII 260

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      EA R+  EM    + PN++T N+++D LCK  K++EA ++ +   Q G 
Sbjct: 261 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 320

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TY +L+DG    G+V+ A  LF  M   G       Y+ LI  +  +   E    
Sbjct: 321 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 380

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ E++ +G KPD+ + NT    +F+  +VE+   +F++++  G   D  +Y   I GL 
Sbjct: 381 VFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 440

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G   E   +FH ++      D RAYN+++DG CKSG++  A E+   +    + P V 
Sbjct: 441 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 500

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY  ++ GL    ++D+A  LF + +   +  NV+ +  LI GF ++    +   +L +M
Sbjct: 501 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 560

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
            +  + P+    + ++D L K E
Sbjct: 561 MKKGLTPNVYTWNSLLDALVKAE 583



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 229/444 (51%), Gaps = 6/444 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++K    P++ T+  +I  LC   R+ EA  +  ++      P++ T   +V+ LC+   
Sbjct: 245 VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 304

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  +FE  A+  G     C P+ VTY ++IDGL K+G VD+A  L  +M D     N
Sbjct: 305 LEEAYKIFES-ASQRG-----CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 358

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            V YTS+IR F       +  ++F E++ +G +P++   N  MD + K G++++   + +
Sbjct: 359 PVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 418

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            +  +G  PD  +Y+ L+ G    G+      +F +M+  G      +Y+ +++G+CK+ 
Sbjct: 419 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 478

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           ++  A  +  EM  K ++P V  +  +  GL +I +++ A+ LF+E +  G+  +   Y 
Sbjct: 479 KVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 538

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + IDG  K G I EA  +   +       ++  +NSL+D L K+  +  AL  F+S+   
Sbjct: 539 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM 598

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              PN  TYSI+I GLC   + +KA   + DM++  +VPNV+T+  +I G  ++   +  
Sbjct: 599 KCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDA 658

Query: 434 IELLHKMKEINVMPDASIVSIVVD 457
             L  + K    +PDA+  + +++
Sbjct: 659 YSLFERFKANGGIPDAASFNALIE 682



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 227/460 (49%), Gaps = 7/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +  ++      P A  + ++I G  +  R  +A  L  +LR  GC P V ++
Sbjct: 164 GRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSF 223

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++  L +      AL+LFE M           EPN+ TY  IID LC  G V++A  +
Sbjct: 224 NSILTCLGKKRKVDEALSLFEVMKKD-------AEPNSSTYNIIIDMLCLGGRVEEAYRI 276

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+  ++ PN++T   ++   C A+   EA ++F     +G  P+ VT+  ++D L K
Sbjct: 277 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 336

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA RL + M+  G   +   Y +L+  F + GR     ++F  +   GCK  +  
Sbjct: 337 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTL 396

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            +  ++   K  E+E    ++ ++ S G  PDV  ++ L  GL +  Q      +F  M+
Sbjct: 397 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 456

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G A D   Y   +DG CK+G + +A E+   ++    +  +  Y +++DGL K  RL+
Sbjct: 457 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 516

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF       +  NVV YS +I G    G++D+A  +  +M +  + PNV T++ L+
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              ++  E ++ +     MKE+   P+    SI+++ L +
Sbjct: 577 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 616



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 229/488 (46%), Gaps = 44/488 (9%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           V + R LK  F P    +T LI  L    R   A  L  +++  G E  V  +TTLV  L
Sbjct: 33  VAVMRRLK--FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRAL 90

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
            R      AL L +E+       G   EP+ V Y   ID   K G VD A +   ++K +
Sbjct: 91  AREGQVADALALVDEVK------GSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQ 144

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM---------------------------- 160
            +KP+ V+YTS+I   C A    EA+ LF +M                            
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 204

Query: 161 -------MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
                   ++G  P+VV+FN I+  L K  K+DEA  L ++M +    P++ TYN ++D 
Sbjct: 205 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDM 263

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            CL GRV  A  +   ME       + + +I+++  CK +++E A  ++     +G  PD
Sbjct: 264 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 323

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V + +L  GL +  QV+ A++LF++M   G  A+   Y + I     +G   +  ++F 
Sbjct: 324 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFK 383

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            L    C+ D+   N+ +D + K+G +E    +F  +     +P+V +YSI+I GL   G
Sbjct: 384 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 443

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           Q  +  ++F  M++     +   ++ ++ GF +  +  K  E+L +MKE  V P  +   
Sbjct: 444 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 503

Query: 454 IVVDLLAK 461
            +VD LAK
Sbjct: 504 AIVDGLAK 511



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 171/329 (51%), Gaps = 6/329 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  V   +++    PD     + +  +     + +   +F  +R +G  PDV +Y
Sbjct: 373 GRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 432

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +        N+F  M      F +    +   Y  ++DG CK G V KA E+
Sbjct: 433 SILIHGLTKAGQARETSNIFHAMKQQG--FAL----DARAYNAVVDGFCKSGKVHKAYEI 486

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK+K ++P V TY +++ G       +EA  LF E   +G++ NVV ++ ++D   K
Sbjct: 487 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGK 546

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA  +L+ M++ G+ P+ +T+N+LLD       +N A   F SM+ M C    ++
Sbjct: 547 VGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYT 606

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILING C+ ++   A   + +M  +G+ P+VV + T+  GL ++  +  A+ LF+  +
Sbjct: 607 YSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFK 666

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            NG   D  ++   I+G+      +EA +
Sbjct: 667 ANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 7/235 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   + +L  + + C  P   T+ +++ GL    R+ EA  LF + +  G E +V  Y
Sbjct: 478 GKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 537

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++G  +      A  + EEM            PN  T+ +++D L K   +++A   
Sbjct: 538 SSLIDGFGKVGRIDEAYLILEEMMKKG------LTPNVYTWNSLLDALVKAEEINEALVC 591

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              MK+    PN  TY+ +I G C  + +N+A   + +M  QG+ PNVVT+  ++  L K
Sbjct: 592 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 651

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV-SMESMGC 235
            G + +A  L +    +G  PDA ++N L++G     R   A +  V  + S  C
Sbjct: 652 VGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQTTVYQLSSSSC 706



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 143/286 (50%), Gaps = 7/286 (2%)

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L +  ++D+A   + +M +   RP    Y  L+       R   A EL   M+ +G +  
Sbjct: 20  LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 79

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V  ++ L+    +  ++  AL+L  E+    ++PD+V++N       +   V+ A K F 
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL---RILKCEFDIRAYNSLIDGLC 355
           E++  G+  D  +Y + I  LCK G + EA ELF  +   R + C +   AYN++I G  
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY---AYNTMIMGYG 196

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
            +GR E A +L   L     +P+VV+++ ++  L    ++D+A  LF  M+++A  PN  
Sbjct: 197 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSS 255

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           T++++I          +   +L +M+  ++ P+   V+I+VD L K
Sbjct: 256 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 301



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 106/234 (45%)

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           + + ++ A+   + M     +P    +  L   L E  + ERA +L  +MQ  G      
Sbjct: 22  RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 81

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            + T +  L + G + +A+ L   ++    E DI  YN  ID   K+G +++A + F  L
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               L P+ V+Y+ MI  LC  G++ +A +LF  ME    VP    ++ +I G+      
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDES 484
               +LL +++E   +P     + ++  L K      +L  F V ++  E + S
Sbjct: 202 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 255



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 6/153 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   +++L  ++K   TP+  T+ SL+  L     I EA   F  ++   C P+ +T
Sbjct: 547 VGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYT 606

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+NGLCR      A   +++M       G+V  PN VTYTT+I GL K G +  A  
Sbjct: 607 YSILINGLCRVQKYNKAFVFWQDMQKQ----GLV--PNVVTYTTMISGLAKVGNITDAYS 660

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           L  + K     P+  ++ ++I G   A    EA
Sbjct: 661 LFERFKANGGIPDAASFNALIEGMSNANRAMEA 693


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 231/464 (49%), Gaps = 9/464 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V   +     +  +   PD VT+TS++  LC  +R+ EA  +F ++      P  + 
Sbjct: 144 VGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYA 203

Query: 61  YTTLVNGLCRTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y T++ G         A +L E + A G       C P+ V Y  I+  L K+G  DKA 
Sbjct: 204 YNTMIMGYGSAGKFDEAYSLLERQRAKG-------CIPSVVAYNCILTCLGKKGKTDKAL 256

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  +MK ++  PN+ TY  +I   C A +   A ++   M + G+ PNV T N+++D L
Sbjct: 257 RIFEEMK-RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRL 315

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK  K+DEA  + + M      PD  T+ +L+DG    GRV+ A  ++  M        V
Sbjct: 316 CKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNV 375

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+ LI  + K    E    +Y EM+  G  PD+++ NT    +F+  + E+   LF+E
Sbjct: 376 VVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEE 435

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           ++  G   DT +Y   I  L K G+  E  EL++ ++   C  D RAYN++IDG CKSG+
Sbjct: 436 IKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGK 495

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A +L   +      P VVTY  ++ GL    ++D+A  LF + + N +  N + +  
Sbjct: 496 VNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSS 555

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           LI GF ++    +   ++ +M +  + P+    + ++D L K E
Sbjct: 556 LIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAE 599



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 233/457 (50%), Gaps = 9/457 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+  +I  LC    +  A  +   ++  G  P+V T   +++ LC+      A ++
Sbjct: 268 PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSI 327

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE M         VC P+  T+ ++IDGL K+G VD A  +  +M D +  PNVV YTS+
Sbjct: 328 FEGMDYK------VCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSL 381

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           IR F       +  +++ EMM  G  P+++  N  MD + K G+ ++   L + +   G 
Sbjct: 382 IRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGF 441

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  +Y+ L+      G      EL+ +M+  GC     +Y+ +I+G+CK+ ++  A  
Sbjct: 442 LPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 501

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM + G  P VV + ++  GL +I +++ A+ LF+E + NG+  +   Y + IDG  
Sbjct: 502 LLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFG 561

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + EA  +   +       ++  +N L+DGL K+  +  AL  F+S+      PN +
Sbjct: 562 KVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQI 621

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY I+I GLC   + +KA   + +M++  + PN IT+  +I G  +    ++   L  + 
Sbjct: 622 TYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERF 681

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           +    +PD++  + +++ L+   I+  +L ++ + E+
Sbjct: 682 RASGGIPDSASYNAMIEGLS---IANRALDAYQLFEE 715



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 190/391 (48%), Gaps = 29/391 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   + +  R+L +   P+ V +TSLI+      R  +   ++ ++   GC PD+   
Sbjct: 354 GRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLL 413

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANG----NGEFGVV---------------------- 94
            T ++ + +   T     LFEE+ A G       + ++                      
Sbjct: 414 NTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKD 473

Query: 95  --CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
             C  +T  Y T+IDG CK G V+KA +LL +MK     P VVTY SV+ G       +E
Sbjct: 474 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDE 533

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  LF E    G++ N V ++ ++D   K G++DEA  +++ M+Q G+ P+ +T+N LLD
Sbjct: 534 AYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLD 593

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G      +N A   F SM+ + C     +Y ILING CK ++   A   + EM  +G+KP
Sbjct: 594 GLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKP 653

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           + + +  +  GL +   V +A  LF+  + +G   D+ +Y   I+GL      ++A +LF
Sbjct: 654 NTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLF 713

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
              R+  C    +   +L+D L K+  LE A
Sbjct: 714 EETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 208/452 (46%), Gaps = 7/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +LG +  + F P   T   L+       +++EA  L   +R F   P    YTTL+  L 
Sbjct: 13  ILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALS 72

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
               +   L LF +M     E G   E N    TT+I    +EG VD A  LL +MK   
Sbjct: 73  EVGESDRMLALFNQMQ----ELGY--EVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNT 126

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
              ++V Y   I  F      + A + F EM   G+ P+ VT+  +M  LCK  ++DEA 
Sbjct: 127 FDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAV 186

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            + + M Q+   P A+ YNT++ G+   G+ + A  L     + GC  +V +Y+ ++   
Sbjct: 187 EIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCL 246

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  + + AL ++ EM  +   P++  +N +   L +   VE AFK+ D M+  G+  + 
Sbjct: 247 GKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNV 305

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            T    ID LCK   + EA  +F  +    C  D   + SLIDGL K GR++ A  ++  
Sbjct: 306 RTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYER 365

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +     +PNVV Y+ +I       + +    ++ +M  +   P+++  +  +    +  E
Sbjct: 366 MLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGE 425

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             K   L  ++K    +PD    SI++  L K
Sbjct: 426 TEKGRALFEEIKARGFLPDTRSYSILIHSLVK 457



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 155/335 (46%), Gaps = 6/335 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    G  +   I    F PD  +++ LI  L       E   L+  ++  GC  D   Y
Sbjct: 424 GETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAY 483

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++G C++     A  L EEM            P  VTY +++DGL K   +D+A  L
Sbjct: 484 NTVIDGFCKSGKVNKAYQLLEEMKTMGHH------PTVVTYGSVVDGLAKIDRLDEAYML 537

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + K   I+ N V Y+S+I GF      +EA  +  EMM +G+ PNV T+N ++D L K
Sbjct: 538 FEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVK 597

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA      M      P+  TY  L++G C   + N A   +  M+  G K    +
Sbjct: 598 AEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 657

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K+  +  A SL+    + G  PD   +N +  GL   ++   A++LF+E +
Sbjct: 658 YTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETR 717

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
             G +  T T    +D L K   + +A  +   LR
Sbjct: 718 LKGCSIHTKTCVALLDALHKAECLEQAAIVGAVLR 752



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 158/319 (49%), Gaps = 7/319 (2%)

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           ++++  +++  EM   G  P   T   ++    K+ K+ EA  LL +M     RP    Y
Sbjct: 5   RNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAY 64

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
            TL+      G  +    LF  M+ +G +  V   + LI  + +   ++ ALSL  EM S
Sbjct: 65  TTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKS 124

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
                D+V++N       ++ +V+ A+K F EM+ NG+  D  TY + +  LCK   + E
Sbjct: 125 NTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDE 184

Query: 328 AVELFHTL---RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           AVE+F  +   R + C +   AYN++I G   +G+ + A  L         +P+VV Y+ 
Sbjct: 185 AVEIFEQMEQNRQVPCAY---AYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNC 241

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           ++  L   G+ DKA  +F +M+ +A +PN+ T++++I    +        ++   MKE  
Sbjct: 242 ILTCLGKKGKTDKALRIFEEMKRDA-MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAG 300

Query: 445 VMPDASIVSIVVDLLAKNE 463
           + P+   ++I++D L K +
Sbjct: 301 LFPNVRTINIMIDRLCKAQ 319



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 156/347 (44%), Gaps = 1/347 (0%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D  +++L +M      P   T   ++     ++   EA  L   M     +P    +  +
Sbjct: 8   DYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTL 67

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  L + G+ D    L + M + G   +     TL+  F   GRV+ A  L   M+S   
Sbjct: 68  IGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTF 127

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              +  Y++ I+ + K  +++ A   + EM + G+ PD V + ++   L + ++++ A +
Sbjct: 128 DADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVE 187

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +F++M++N      + Y T I G    G   EA  L    R   C   + AYN ++  L 
Sbjct: 188 IFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLG 247

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K G+ + AL +F  +    + PN+ TY+I+IG LC  G ++ A  +   M+E  + PNV 
Sbjct: 248 KKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVR 306

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T +++I    +  +  +   +   M      PD +    ++D L K 
Sbjct: 307 TINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQ 353



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV   ++V+  +++   TP+  T+  L+ GL     I EA   F  ++   C P+  T
Sbjct: 563 VGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQIT 622

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+NGLC+      A   ++EM           +PNT+TYT +I GL K G V +A  
Sbjct: 623 YCILINGLCKVRKFNKAFVFWQEMQKQG------LKPNTITYTAMISGLAKSGNVAQASS 676

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + +     P+  +Y ++I G   A    +A +LF E   +G   +  T   ++D L 
Sbjct: 677 LFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALH 736

Query: 181 KNGKMDEAS 189
           K   +++A+
Sbjct: 737 KAECLEQAA 745



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 117/256 (45%)

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           T   ++ +++   M   G   T ++   L+    K++++  A  L   M     +P    
Sbjct: 4   TRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSA 63

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + TL   L E+ + +R   LF++MQ  G   +     T I    + G +  A+ L   ++
Sbjct: 64  YTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMK 123

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + DI  YN  ID   K G++++A + F  +    LVP+ VTY+ M+G LC   ++D
Sbjct: 124 SNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLD 183

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A ++F  ME+N  VP    ++ +I G+    +  +   LL + +    +P     + ++
Sbjct: 184 EAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCIL 243

Query: 457 DLLAKNEISLNSLPSF 472
             L K   +  +L  F
Sbjct: 244 TCLGKKGKTDKALRIF 259



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 81/187 (43%)

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           ++  EM   G     +T    +    K+  ++EA +L   +R  K      AY +LI  L
Sbjct: 12  QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            + G  +  L LF  +       NV   + +I     +G++D A  L  +M+ N    ++
Sbjct: 72  SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
           + +++ I  F ++ +     +  H+MK   ++PD    + ++ +L K      ++  F  
Sbjct: 132 VLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191

Query: 475 HEQQEEV 481
            EQ  +V
Sbjct: 192 MEQNRQV 198


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/407 (31%), Positives = 211/407 (51%), Gaps = 10/407 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
            TF  +++ LC+  +   A  L  ++      P+  TY T++ G C       AL++  E
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 544

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIR 142
           M    G       PN  TY T+I G CK G VD+A ++  +M  K  +KP  V Y ++I 
Sbjct: 545 MRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 599

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+C     + A      M+++GV   V T+N+++  L  +G+  EA  L++ M   G+ P
Sbjct: 600 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 659

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D FTYN L++G C  G V  A E+F +M   G + TV +Y+ LI    K  +++    L+
Sbjct: 660 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 719

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            E + +GI+PD+V++N L         ++RAF++  EM++  +A D  TY T + GLC  
Sbjct: 720 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 779

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G + EA +L   +     + D+  YN+LI G    G ++ AL +   +      P ++TY
Sbjct: 780 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 839

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           + +I GLC +GQ D A ++  +M EN + P+  T+  LI G    +E
Sbjct: 840 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 215/432 (49%), Gaps = 19/432 (4%)

Query: 42  AAALFT---KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           A ALF    +LR+  C     T+  ++  LC       AL L  +M            PN
Sbjct: 472 AFALFADMFRLRLPLC---TTTFNIMLRHLCSAGKPARALELLRQMP----------RPN 518

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            VTY T+I G C  G V  A +++ +M+++  I PN  TY +VI G+C     +EA ++F
Sbjct: 519 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 578

Query: 158 IEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            EM+ +G V+P  V +N ++   C  GK+D A    D M++ GV     TYN L+    +
Sbjct: 579 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 638

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR   A EL   M   G    VF+Y+ILING+CK   ++ AL ++  M  +G++  VV 
Sbjct: 639 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 698

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +  L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   + 
Sbjct: 699 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 758

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +   D   YN+L+ GLC  GR++ A +L   +    + P++VTY+ +I G    G + 
Sbjct: 759 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI-VSIV 455
            A  +  +M      P ++T++ LI+G  +  +      ++ +M E  + PD S  +S++
Sbjct: 819 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878

Query: 456 VDLLAKNEISLN 467
             L  ++E +++
Sbjct: 879 EGLTTEDERAID 890



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 190/382 (49%), Gaps = 6/382 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPDVFTYTTLVNGLCRTS 72
           +L+    P+AVT+ ++I G C+  R+  A  +  ++R   G  P+ +TY T+++G C+  
Sbjct: 510 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 569

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ +F+EM    GE     +P  V Y  +I G C +G +D A     +M ++ +  
Sbjct: 570 RVDEAVKVFDEMLT-KGEV----KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM 624

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            V TY  ++          EA  L  EM  +G+ P+V T+N++++  CK G + +A  + 
Sbjct: 625 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 684

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M + GVR    TY  L+      G+V    +LF      G +  +  Y+ LIN +  +
Sbjct: 685 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 744

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             I+ A  +  EM  K I PD V +NTL  GL  + +V+ A KL DEM   G+  D  TY
Sbjct: 745 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 804

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I G    G + +A+ + + +        +  YN+LI GLCK+G+ + A  + + +  
Sbjct: 805 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 864

Query: 373 GVLVPNVVTYSIMIGGLCNDGQ 394
             + P+  TY  +I GL  + +
Sbjct: 865 NGITPDDSTYISLIEGLTTEDE 886



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 166/320 (51%), Gaps = 7/320 (2%)

Query: 1   MGRVSHGFVVLGRIL-KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +GRV     V   +L K    P+AV + +LI G C + ++  A     ++   G    V 
Sbjct: 568 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 627

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY  LV+ L        A  L EEM       G    P+  TY  +I+G CKEG V KA 
Sbjct: 628 TYNLLVHALFMDGRGTEAYELVEEMG------GKGLAPDVFTYNILINGHCKEGNVKKAL 681

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+   M  + ++  VVTYT++I          E  +LF E + +G++P++V +N +++  
Sbjct: 682 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 741

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
             +G +D A  ++  M +  + PD  TYNTL+ G CL GRV+ A++L   M   G +  +
Sbjct: 742 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDL 801

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+GY    +++ AL + +EM++KG  P ++ +N L  GL +  Q + A  +  E
Sbjct: 802 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 861

Query: 300 MQRNGVAADTWTYRTFIDGL 319
           M  NG+  D  TY + I+GL
Sbjct: 862 MVENGITPDDSTYISLIEGL 881



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 22/214 (10%)

Query: 257 GALSLYSEMLS--KGIKPDVVIH----------NTLFVGLFEIHQVERAFKLFDEMQRNG 304
            AL+L+  +LS  K + P  V+           N L      +     + +L+  M+   
Sbjct: 393 AALALFKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLS 452

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +   T +    +  L        A  LF  +  L+       +N ++  LC +G+   AL
Sbjct: 453 LPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 508

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AVVPNVITFDMLIRG 423
           EL R +P     PN VTY+ +I G C+ G++  A D+  +M E   + PN  T+  +I G
Sbjct: 509 ELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISG 564

Query: 424 FIRINEPSKVIELLHKM-KEINVMPDASIVSIVV 456
           + ++    + +++  +M  +  V P+A + + ++
Sbjct: 565 WCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 598



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 41/146 (28%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++G + K    PD VT+ +L++GLC   R+ EA  L  ++   G +PD+ TY
Sbjct: 745 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 804

Query: 62  TTLV-----------------------------------NGLCRTSHTIVALNLFEEMAN 86
            TL+                                    GLC+      A N+ +EM  
Sbjct: 805 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV- 863

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKE 112
              E G+   P+  TY ++I+GL  E
Sbjct: 864 ---ENGIT--PDDSTYISLIEGLTTE 884


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 225/461 (48%), Gaps = 7/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++     L  +     +PDAVT+ +L+   C +  + EA AL  +++  G  P   TY
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLV+   R      A  + E M      +G   EP+  TY  +  GLC+ G VD+A  L
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMT----AYGF--EPDLRTYNVLAMGLCQAGKVDEAFRL 335

Query: 122 LLQMKDKNIK-PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
             +M+      P+VVTY +++      +  ++A RL  EM D+GV+P +VT N+++  LC
Sbjct: 336 KDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLC 395

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK++EA   L+ + + G+ PD  TYNTL+D +C  G V  A  L   M   G K   F
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + + ++   CK K  E A  L      +G  PD V + T+    F+ +  E A +L+D+M
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +     TY T I GLC+   + EA++  +         D   YN +I   CK G L
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A      +      P+VVT + ++ GLC  G++DKA  LF    E     +VIT++ L
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I+   ++ +    +     M+   + PDA   ++V+  L++
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSE 676



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 216/443 (48%), Gaps = 9/443 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L R+ +    P   T+ +L+        I +A  +   +  +G EPD+ TY
Sbjct: 257 GMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTY 316

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L  GLC+      A  L +EM       G    P+ VTY T++D   K      A  L
Sbjct: 317 NVLAMGLCQAGKVDEAFRLKDEMER----LGTAL-PDVVTYNTLVDACFKWRCSSDALRL 371

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+DK +KP +VT+  V++  C      EA     ++ ++G+ P+V+T+N ++D  CK
Sbjct: 372 LEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCK 431

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A  L+D M+  G++ D FT NT+L   C   R   A+EL  S    G      S
Sbjct: 432 AGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVS 491

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  ++  Y K    E AL L+ +M+ + + P +  +NTL  GL  + +++ A    +E  
Sbjct: 492 YGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFV 551

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGR 359
             G+  D  TY   I   CK G +  A   FH  ++++  F  D+   N+L++GLC  G+
Sbjct: 552 EKGLVPDETTYNIIIHAYCKEGDLENAFR-FHN-KMVENSFKPDVVTCNTLMNGLCLHGK 609

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ AL+LF S        +V+TY+ +I  +C  G +D A   F DME   + P+  T+++
Sbjct: 610 LDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNV 669

Query: 420 LIRGFIRINEPSKVIELLHKMKE 442
           ++          +   +LHK+ +
Sbjct: 670 VLSALSEAGRSEEAHNMLHKLAD 692



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 219/469 (46%), Gaps = 50/469 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAAL--FTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           P      +++  L      +  A+L  F  L      P+ +T+  LV+  C       AL
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
                M      FG+   P+ VTY T+++  C++G + +A+ LL +MK   I P   TY 
Sbjct: 229 ATLSTMQG----FGL--SPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +++  F       +A ++   M   G +P++ T+NV+   LC+ GK+DEA RL D M + 
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERL 342

Query: 199 GVR-PDAFTYNTLLDGFCLTGRVNH-AKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           G   PD  TYNTL+D  C   R +  A  L   M   G K T+ +++I++   CK  ++E
Sbjct: 343 GTALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLE 401

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL    ++  +G+ PDV+ +NTL     +   V +AF L DEM   G+  DT+T  T +
Sbjct: 402 EALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461

Query: 317 DGLCKNGYIVEAVELFHT-----------------------------LRIL------KCE 341
             LCK     +A EL H+                             LR+       K  
Sbjct: 462 YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLI 521

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
             I  YN+LI GLC+  RL+ A++         LVP+  TY+I+I   C +G ++ A   
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL----LHKMKEINVM 446
              M EN+  P+V+T + L+ G     +  K ++L    + K K+++V+
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 222/498 (44%), Gaps = 78/498 (15%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE-PDVF 59
           +G +     V+  +    F PD  T+  L  GLC   ++ EA  L  ++   G   PDV 
Sbjct: 291 LGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVV 350

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY TLV+   +   +  AL L EEM +     GV  +P  VT+  ++  LCKEG +++A 
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDK----GV--KPTLVTHNIVVKSLCKEGKLEEAL 404

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
             L ++ ++ + P+V+TY ++I  +C A +  +A  L  EM+ +G++ +  T N ++  L
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464

Query: 180 CKNGKMDEAS-----------------------------------RLLDLMIQHGVRPDA 204
           CK  + ++A                                    RL D MI+  + P  
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSI 524

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TYNTL+ G C   R+  A +        G      +Y+I+I+ YCK  ++E A   +++
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNK 584

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+    KPDVV  NTL  GL    ++++A KLF+     G   D  TY T I  +CK G 
Sbjct: 585 MVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGD 644

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL----------ELFRSLPCGV 374
           +  A+  F  + +   + D   YN ++  L ++GR E A           +L +S  C +
Sbjct: 645 VDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPL 704

Query: 375 LVPNVV--------------------------TYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           L P+                            TY   + GLC  GQ+ +A+ +  +M + 
Sbjct: 705 LKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQK 764

Query: 409 AVVPNVITFDMLIRGFIR 426
            +  +  T+  L+ G I+
Sbjct: 765 GMPVDCSTYITLMEGLIK 782



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 166/363 (45%), Gaps = 36/363 (9%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + PN  T+  ++   C      +A      M   G+ P+ VT+N +++  C+ G + EA 
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 263

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M + G+ P   TYNTL+  F   G +  A ++  SM + G +  + +Y++L  G 
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGL 323

Query: 250 CKNKEIE------------------------------------GALSLYSEMLSKGIKPD 273
           C+  +++                                     AL L  EM  KG+KP 
Sbjct: 324 CQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           +V HN +   L +  ++E A    +++   G+A D  TY T ID  CK G + +A  L  
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +     + D    N+++  LCK  R E A EL  S P    VP+ V+Y  ++     + 
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
             + A  L+  M E  ++P++ T++ LI+G  R+    + I+ L++  E  ++PD +  +
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYN 563

Query: 454 IVV 456
           I++
Sbjct: 564 III 566



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 162/335 (48%), Gaps = 4/335 (1%)

Query: 118 AKELLLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRL--FIEMMDQGVQPNVVTFNV 174
           A +LL  ++ +  ++P++    +V+     +        L  F  +++  + PN  TFN+
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++   C  G + +A   L  M   G+ PDA TYNTLL+  C  G +  A+ L   M+  G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
              T  +Y+ L++ + +   I+ A  +   M + G +PD+  +N L +GL +  +V+ AF
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333

Query: 295 KLFDEMQRNGVA-ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
           +L DEM+R G A  D  TY T +D   K     +A+ L   +R    +  +  +N ++  
Sbjct: 334 RLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCK G+LE AL     +    L P+V+TY+ +I   C  G + KA  L  +M    +  +
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             T + ++    ++       ELLH   +   +PD
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 129/277 (46%), Gaps = 3/277 (1%)

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV--NHAKELFVSMESMGCKHTVFSYSIL 245
           A  L  L  + GVRP     N +L     +       + ++F S+  +      +++++L
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++ +C    +  AL+  S M   G+ PD V +NTL         +  A  L   M+R+G+
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
           A    TY T +    + G+I +A ++  ++     E D+R YN L  GLC++G+++ A  
Sbjct: 275 APTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFR 334

Query: 366 LFRSLP-CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           L   +   G  +P+VVTY+ ++           A  L  +M +  V P ++T +++++  
Sbjct: 335 LKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSL 394

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +  +  + +  L K+ E  + PD    + ++D   K
Sbjct: 395 CKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCK 431


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 227/462 (49%), Gaps = 7/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   +     +      PD V++TS+I  LC   R+ EA  LF ++      P  + Y
Sbjct: 263 GNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY 322

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ G         A  L E +     E G  C P+ V++ +I+  L K+  VD+A  L
Sbjct: 323 NTMIMGYGSAGRFEDAYKLLERLR----ERG--CIPSVVSFNSILTCLGKKRKVDEALSL 376

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              MK K+ +PN  TY  +I   C      EA R+  EM    + PN++T N+++D LCK
Sbjct: 377 FEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 435

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K++EA ++ +   Q G  PD  TY +L+DG    G+V+ A  LF  M   G       
Sbjct: 436 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 495

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI  +  +   E    ++ E++ +G KPD+ + NT    +F+  +VE+   +F++++
Sbjct: 496 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 555

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  +Y   I GL K G   E   +FH ++      D RAYN+++DG CKSG++ 
Sbjct: 556 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 615

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A E+   +    + P V TY  ++ GL    ++D+A  LF + +   +  NV+ +  LI
Sbjct: 616 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 675

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            GF ++    +   +L +M +  + P+    + ++D L K E
Sbjct: 676 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAE 717



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 244/510 (47%), Gaps = 60/510 (11%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++K    P++ T+  +I  LC   R+ EA  +  ++      P++ T   +V+ LC+   
Sbjct: 379 VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 438

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A  +FE  A+  G     C P+ VTY ++IDGL K+G VD+A  L  +M D     N
Sbjct: 439 LEEAYKIFES-ASQRG-----CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 492

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD---------------- 177
            V YTS+IR F       +  ++F E++ +G +P++   N  MD                
Sbjct: 493 PVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 552

Query: 178 -------------------ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
                               L K G+  E S +   M Q G   DA  YN ++DGFC +G
Sbjct: 553 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 612

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           +V+ A E+   M+    + TV +Y  +++G  K   ++ A  L+ E  SKGI+ +VV+++
Sbjct: 613 KVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 672

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           +L  G  ++ +++ A+ + +EM + G+  + +T+ + +D L K   I EA+  F +++ +
Sbjct: 673 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM 732

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
           KC  +   Y+ LI+GLC+  +   A   ++ +    LVPNVVTY+ MI GL   G +  A
Sbjct: 733 KCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDA 792

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV-------------------IELLHK 439
             LF   + N  +P+  +F+ LI G    N   +                    I LL  
Sbjct: 793 YSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDA 852

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + +   +  A+IV  V+  +AK++ +  SL
Sbjct: 853 LNKSECLEQAAIVGAVLREIAKSQHASRSL 882



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 227/460 (49%), Gaps = 7/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +  ++      P A  + ++I G  +  R  +A  L  +LR  GC P V ++
Sbjct: 298 GRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSF 357

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++  L +      AL+LFE M           EPN+ TY  IID LC  G V++A  +
Sbjct: 358 NSILTCLGKKRKVDEALSLFEVMKKD-------AEPNSSTYNIIIDMLCLGGRVEEAYRI 410

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+  ++ PN++T   ++   C A+   EA ++F     +G  P+ VT+  ++D L K
Sbjct: 411 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 470

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA RL + M+  G   +   Y +L+  F + GR     ++F  +   GCK  +  
Sbjct: 471 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 530

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            +  ++   K  E+E    ++ ++ S G  PDV  ++ L  GL +  Q      +F  M+
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G A D   Y   +DG CK+G + +A E+   ++    +  +  Y +++DGL K  RL+
Sbjct: 591 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 650

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF       +  NVV YS +I G    G++D+A  +  +M +  + PNV T++ L+
Sbjct: 651 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 710

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              ++  E ++ +     MKE+   P+    SI+++ L +
Sbjct: 711 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 750



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 190/362 (52%), Gaps = 6/362 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +   +++    PD     + +  +     + +   +F  +R +G  PDV +Y
Sbjct: 507 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 566

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +        N+F  M      F +    +   Y  ++DG CK G V KA E+
Sbjct: 567 SILIHGLTKAGQARETSNIFHAMKQQG--FAL----DARAYNAVVDGFCKSGKVHKAYEI 620

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK+K ++P V TY +++ G       +EA  LF E   +G++ NVV ++ ++D   K
Sbjct: 621 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGK 680

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA  +L+ M++ G+ P+ +T+N+LLD       +N A   F SM+ M C    ++
Sbjct: 681 VGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYT 740

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILING C+ ++   A   + +M  +G+ P+VV + T+  GL ++  +  A+ LF+  +
Sbjct: 741 YSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFK 800

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   D  ++   I+G+      +EA ++F   R+  C  +I++  SL+D L KS  LE
Sbjct: 801 ANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLE 860

Query: 362 IA 363
            A
Sbjct: 861 QA 862



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 229/488 (46%), Gaps = 44/488 (9%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           V + R LK  F P    +T LI  L    R   A  L  +++  G E  V  +TTLV  L
Sbjct: 167 VAVMRRLK--FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRAL 224

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
            R      AL L +E+       G   EP+ V Y   ID   K G VD A +   ++K +
Sbjct: 225 AREGQVADALALVDEVK------GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQ 278

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM---------------------------- 160
            +KP+ V+YTS+I   C A    EA+ LF +M                            
Sbjct: 279 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 338

Query: 161 -------MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
                   ++G  P+VV+FN I+  L K  K+DEA  L ++M +    P++ TYN ++D 
Sbjct: 339 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDM 397

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            CL GRV  A  +   ME       + + +I+++  CK +++E A  ++     +G  PD
Sbjct: 398 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 457

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V + +L  GL +  QV+ A++LF++M   G  A+   Y + I     +G   +  ++F 
Sbjct: 458 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 517

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            L    C+ D+   N+ +D + K+G +E    +F  +     +P+V +YSI+I GL   G
Sbjct: 518 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 577

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           Q  +  ++F  M++     +   ++ ++ GF +  +  K  E+L +MKE  V P  +   
Sbjct: 578 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 637

Query: 454 IVVDLLAK 461
            +VD LAK
Sbjct: 638 AIVDGLAK 645



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 167/370 (45%), Gaps = 10/370 (2%)

Query: 73  HTIVAL-NLFEEMAN-GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
           H + AL  + EEMA  G G     C         +   L +   +D A   +  M+    
Sbjct: 123 HDLAALEKVLEEMAVLGYGLPNQAC-------AHLAAALVRARRLDDAVLAVAVMRRLKF 175

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +P    YT +I     A+    A  L  +M + G +  V  F  ++  L + G++ +A  
Sbjct: 176 RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 235

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L+D +    + PD   YN  +D F   G V+ A + F  +++ G K    SY+ +I   C
Sbjct: 236 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC 295

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K   +  A  L+++M ++   P    +NT+ +G     + E A+KL + ++  G      
Sbjct: 296 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 355

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           ++ + +  L K   + EA+ LF  ++    E +   YN +ID LC  GR+E A  +   +
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 414

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               L PN++T +IM+  LC   ++++A  +F    +    P+ +T+  LI G  +  + 
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 474

Query: 431 SKVIELLHKM 440
            +   L  KM
Sbjct: 475 DEAYRLFEKM 484



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 144/286 (50%), Gaps = 7/286 (2%)

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L +  ++D+A   + +M +   RP    Y  L+       R   A EL   M+ +G +  
Sbjct: 154 LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 213

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V  ++ L+    +  ++  AL+L  E+    ++PD+V++N       +   V+ A+K F 
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL---RILKCEFDIRAYNSLIDGLC 355
           E++  G+  D  +Y + I  LCK G + EA ELF  +   R + C +   AYN++I G  
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY---AYNTMIMGYG 330

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
            +GR E A +L   L     +P+VV+++ ++  L    ++D+A  LF  M+++A  PN  
Sbjct: 331 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSS 389

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           T++++I          +   +L +M+  ++ P+   V+I+VD L K
Sbjct: 390 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 435



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   +++L  ++K   TP+  T+ SL+  L     I EA   F  ++   C P+ +T
Sbjct: 681 VGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYT 740

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+NGLCR      A   +++M       G+V  PN VTYTT+I GL K G +  A  
Sbjct: 741 YSILINGLCRVQKYNKAFVFWQDMQKQ----GLV--PNVVTYTTMISGLAKVGNITDAYS 794

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + K     P+  ++ ++I G   A    EA ++F E   +G + N+ +   ++D L 
Sbjct: 795 LFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALN 854

Query: 181 KNGKMDEAS 189
           K+  +++A+
Sbjct: 855 KSECLEQAA 863



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 7/256 (2%)

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           + +  C H       L     + + ++ A+   + M     +P    +  L   L E  +
Sbjct: 142 LPNQACAH-------LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARR 194

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            ERA +L  +MQ  G       + T +  L + G + +A+ L   ++    E DI  YN 
Sbjct: 195 PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNV 254

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
            ID   K+G +++A + F  L    L P+ V+Y+ MI  LC  G++ +A +LF  ME   
Sbjct: 255 CIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 314

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            VP    ++ +I G+          +LL +++E   +P     + ++  L K      +L
Sbjct: 315 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 374

Query: 470 PSFTVHEQQEEVDESN 485
             F V ++  E + S 
Sbjct: 375 SLFEVMKKDAEPNSST 390


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 240/492 (48%), Gaps = 43/492 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++ +   +  ++ K   +P+ VT+  +I GLC   R+  A  L  K+ V G +P++ TY
Sbjct: 234 GKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTY 293

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEF-GVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             L+NGL       + LN F+++ +   E  G    PN V +  +IDG CK G ++ A +
Sbjct: 294 GALINGL-------IKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALK 346

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV--------------- 165
           +   M  KNI P  VT  S+++GFC +     A+    E++  G+               
Sbjct: 347 IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLC 406

Query: 166 --------------------QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                               +P+ +   +++  LCK+GK  EA+ L   +++ G      
Sbjct: 407 KKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKV 466

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T N L+ G C  G++  A  +   M   G      +Y+ LI G+C   ++EG   L  EM
Sbjct: 467 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 526

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             +GI+PD+  +N L  GL  + +++ A KL+DE + +G+ ++  TY   ++G CK   I
Sbjct: 527 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 586

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +   LF+ L   K E +   YN +I   C++G +  AL+L  ++    ++PN  TYS +
Sbjct: 587 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 646

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G+CN G ++ A+ L  +M +   VPNV+ +  LI G+ ++ +         +M   N+
Sbjct: 647 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNI 706

Query: 446 MPDASIVSIVVD 457
            P+    ++++D
Sbjct: 707 HPNKFTYTVMID 718



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 229/440 (52%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +     +   ++    TP +VT  SL++G C   +I  A     ++   G       
Sbjct: 338 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 397

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             ++V+ LC+      A    + M + N        P+ +  T ++ GLCK+G   +A E
Sbjct: 398 CYSVVHWLCKKFRYHSAFRFTKMMLSRN------FRPSDLLLTMLVCGLCKDGKHLEATE 451

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++ +K    + VT  ++I G C A    EA R+  EM+++G+  + +T+N ++   C
Sbjct: 452 LWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFC 511

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GK++   RL + M + G++PD +TYN LL G C  G+++ A +L+   ++ G    + 
Sbjct: 512 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 571

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y I++ GYCK   IE   +L++E+LSK ++ + +++N +     +   V  A +L + M
Sbjct: 572 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 631

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G+  +  TY + I G+C  G + +A  L   +R      ++  Y +LI G CK G++
Sbjct: 632 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 691

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A   +  +    + PN  TY++MI G C  G M+KA +L + M+E+ +VP+V+T+++L
Sbjct: 692 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 751

Query: 421 IRGFIRINEPSKVIELLHKM 440
             GF + N+     ++  +M
Sbjct: 752 TNGFCKANDMDNAFKVCDQM 771



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 201/397 (50%), Gaps = 12/397 (3%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  PDVF++T ++N LC+      A+ LF +M     + G+   PN VTY  II+GLC+ 
Sbjct: 215 GACPDVFSFTNVINALCKGGKMENAIELFMKME----KLGI--SPNVVTYNCIINGLCQN 268

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G +D A EL  +M  K ++PN+ TY ++I G      +++   +  EM+  G  PNVV F
Sbjct: 269 GRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVF 328

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++D  CK G ++ A ++ D+MI   + P + T  +L+ GFC + ++ HA+     + S
Sbjct: 329 NNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILS 388

Query: 233 MGCK-HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
            G   H    YS+ ++  CK      A      MLS+  +P  ++   L  GL +  +  
Sbjct: 389 SGLSIHPDNCYSV-VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHL 447

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A +L+  +   G  A   T    I GLC  G + EA  +   +       D   YN+LI
Sbjct: 448 EATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 507

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            G C  G++E    L   +    + P++ TY+ ++ GLCN G++D A  L+ + + + ++
Sbjct: 508 LGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLI 567

Query: 412 PNVITFDMLIRGFIRINEPSKV----IELLHKMKEIN 444
            N+ T+ +++ G+ + N    V     ELL K  E+N
Sbjct: 568 SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELN 604



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 205/421 (48%), Gaps = 17/421 (4%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A  +F  L   G  P + T    ++ L + +       +F  M+ G       C P+  +
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEG------AC-PDVFS 222

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           +T +I+ LCK G ++ A EL ++M+   I PNVVTY  +I G C     + A  L  +M 
Sbjct: 223 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 282

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +GVQPN+ T+  +++ L K    D+ + +LD MI  G  P+   +N L+DG+C  G + 
Sbjct: 283 VKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIE 342

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPD---VVI 276
            A ++   M S     T  +   L+ G+CK+ +IE A +   E+LS G  I PD    V+
Sbjct: 343 GALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVV 402

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           H       F  H   R  K+   + RN   +D       + GLCK+G  +EA EL+  L 
Sbjct: 403 H--WLCKKFRYHSAFRFTKMM--LSRNFRPSDL-LLTMLVCGLCKDGKHLEATELWFRLL 457

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                      N+LI GLC +G+L  A  + + +    L  + +TY+ +I G CN+G+++
Sbjct: 458 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 517

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
               L  +M +  + P++ T++ L+RG   + +    I+L  + K   ++ +     I++
Sbjct: 518 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 577

Query: 457 D 457
           +
Sbjct: 578 E 578



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 185/386 (47%), Gaps = 6/386 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R    F     +L   F P  +  T L+ GLC + + +EA  L+ +L   G      T  
Sbjct: 410 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 469

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++GLC       A  + +EM     E G+  +   +TY  +I G C EG V+    L 
Sbjct: 470 ALIHGLCGAGKLPEASRIVKEML----ERGLPMD--RITYNALILGFCNEGKVEGCFRLR 523

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  + I+P++ TY  ++RG C     ++A +L+ E    G+  N+ T+ ++M+  CK 
Sbjct: 524 EEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKA 583

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++++   L + ++   +  ++  YN ++   C  G V  A +L  +M+S G      +Y
Sbjct: 584 NRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATY 643

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI+G C    +E A  L  EM  +G  P+VV +  L  G  ++ Q++ A   + EM  
Sbjct: 644 SSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 703

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  + +TY   IDG CK G + +A  L   ++      D+  YN L +G CK+  ++ 
Sbjct: 704 FNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDN 763

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGG 388
           A ++   +    L  + +TY+ ++ G
Sbjct: 764 AFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 138/277 (49%), Gaps = 29/277 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   F +   + K    PD  T+  L++GLC   ++ +A  L+ + +  G   ++ TY
Sbjct: 514 GKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTY 573

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV---------CE---------------- 96
             ++ G C+ +      NLF E+ +   E   +         C+                
Sbjct: 574 GIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 633

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN  TY+++I G+C  G V+ AK L+ +M+ +   PNVV YT++I G+C     + 
Sbjct: 634 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDT 693

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+  ++EM+   + PN  T+ V++D  CK G M++A+ LL  M + G+ PD  TYN L +
Sbjct: 694 AESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTN 753

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           GFC    +++A ++   M + G      +Y+ L++G+
Sbjct: 754 GFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 224/456 (49%), Gaps = 49/456 (10%)

Query: 2   GRVSHGFVVLGRILKS-------CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 54
           G ++ G+   GR+  +          P+A T+  LI  LC   ++ +A ++   +   GC
Sbjct: 139 GALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGC 198

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
            PDV TY  L+   C+      A+ L + M A G       C PN VTY  ++DG+C EG
Sbjct: 199 APDVVTYNILLEATCKGRGYRQAMELIDLMRAEG-------CTPNNVTYNVLMDGMCGEG 251

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            VD A ELL  +     KP+ V Y +V++G C A+ W +A  L  EM+ +   PN  TFN
Sbjct: 252 DVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFN 311

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           V++  LC+ G + +A +LL+ M +HG   +  TYN +++G C    V+ A  L   M+S 
Sbjct: 312 VVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSY 371

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GCK  + +Y+ L+ G C   +   A  L   M   G  PD V  NTL   L +   +  A
Sbjct: 372 GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA 431

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR------------ILKCE 341
            ++F +M   G   ++ TY T I GL K   + +A+ELF+ +             + +C 
Sbjct: 432 IEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECL 491

Query: 342 FD----------IRA------------YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            D          +R             YN+++ GLC++G+ E A+++   +     +P+ 
Sbjct: 492 NDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDD 551

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +TY I+I GL  +G +++AR+L + +    V+ N +
Sbjct: 552 LTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSL 587



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 223/478 (46%), Gaps = 54/478 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEP--DVFTYTTLVNGLCRTSHTIVA 77
           PDA     L++ LC   R  +A       RV G C P   V  Y  L +G CR      A
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAE------RVVGACGPAATVVAYGALTDGYCRAGRLGDA 154

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
             +           G+  +PN  TY  +I  LC+ G V  A  +L  M  +   P+VVTY
Sbjct: 155 RRVV---------GGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTY 205

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             ++   C  + + +A  L   M  +G  PN VT+NV+MD +C  G +D+A  LL  +  
Sbjct: 206 NILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPS 265

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--------------------------- 230
           HG +P    YNT+L G C   R   A EL   M                           
Sbjct: 266 HGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQ 325

Query: 231 -----ESM---GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
                E M   GC   + +Y+ +ING C+ + ++GA+ L S+M S G KPD+V +NTL  
Sbjct: 326 AIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLK 385

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
           GL    Q   A +L D M +NG   D  T+ T I  LC+ G +V+A+E+F  +    C  
Sbjct: 386 GLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTP 445

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           +   Y+++I GL K+ +L+ ALELF  +      P+ + Y ++   L +D  +++A    
Sbjct: 446 NSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTV 504

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
             ++++ + P+ + ++ ++ G  R  +    I+++  M     MPD     I+++ LA
Sbjct: 505 RKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLA 562



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 174/391 (44%), Gaps = 44/391 (11%)

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           +  L   G +D A  L+   +     P+      ++R  C     ++A+R+       G 
Sbjct: 78  LSALVHRGDLDAALRLV---ESSPRPPDAALANRLVRDLCRRGRPDDAERVVGAC---GP 131

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV----- 220
              VV +  + D  C+ G++ +A R++  M    V+P+A+TYN L+   C  G+V     
Sbjct: 132 AATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALS 188

Query: 221 ------------------------------NHAKELFVSMESMGCKHTVFSYSILINGYC 250
                                           A EL   M + GC     +Y++L++G C
Sbjct: 189 VLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC 248

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
              +++ AL L   + S G KP  V +NT+  GL    +   A +L  EM R     +  
Sbjct: 249 GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEA 308

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           T+   I  LC+ G + +A++L   +    C  +I  YN++I+GLC+   ++ A+ L   +
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 368

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                 P++VTY+ ++ GLC+  Q   A +L  +M +N  +P+ +TF+ LI    +    
Sbjct: 369 KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 428

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              IE+  +M +    P++   S ++  LAK
Sbjct: 429 VDAIEVFKQMPDKGCTPNSITYSTIISGLAK 459


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 232/456 (50%), Gaps = 7/456 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +     L  ++   +TPD +  T LIKG      I +A+ +   L     EPDVF Y
Sbjct: 82  GKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH-TEPDVFAY 140

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C+ +    A  +   M    G       P+ VTY  +I  LC    +  A ++
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRM-KARGFL-----PDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L Q+   N  P V+TYT +I         NEA +L  EM+ +G+ P++ T+N I+  +CK
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++ A+ L+  +   G +PD  +YN LL  F   G+ +  ++L   M S GC+    +
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILI+  C+   I+ A+S+   M+ K + PD   ++ L   L +  +++ A  + D M 
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   D   Y T +  LCKNG   +A+E+F+ LR + C  ++ +YN++I  L   G   
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL +  ++    + P+ +TY+ +I  LC DG +++A  L  DME++   P VI++++++
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            G  ++      I +  +M E    P+ +   ++++
Sbjct: 495 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 530



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 207/399 (51%), Gaps = 6/399 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     VL R+    F PD VT+  +I  LC   ++  A  +  +L +  C P V TYT
Sbjct: 152 RIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYT 211

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+           A+ L EEM       G++  P+  TY  II G+CKEG V++A EL+
Sbjct: 212 ILIEATIVEGGINEAMKLLEEML----ARGLL--PDMYTYNAIIRGMCKEGMVERAAELI 265

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             +  K  KP+V++Y  ++R F     W+E ++L  EM  +G +PN VT+++++  LC+ 
Sbjct: 266 TSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 325

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G++DEA  +L +MI+  + PD ++Y+ L+   C  GR++ A  +   M S GC   + +Y
Sbjct: 326 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 385

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + ++   CKN     AL +++++   G  P+V  +NT+   L+      RA  +   M  
Sbjct: 386 NTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMIS 445

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV  D  TY + I  LC++G + EA+ L   +        + +YN ++ GLCK  R++ 
Sbjct: 446 KGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDD 505

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           A+ +F  +      PN  TY ++I G+   G   +A +L
Sbjct: 506 AIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 216/437 (49%), Gaps = 6/437 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           IL+S   PD   + ++I G C  +RI  A  +  +++  G  PD+ TY  ++  LC    
Sbjct: 128 ILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 187

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
             +AL + +++   N      C P  +TYT +I+    EG +++A +LL +M  + + P+
Sbjct: 188 LGLALKVLDQLLLDN------CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPD 241

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           + TY ++IRG C       A  L   +  +G +P+V+++N+++      GK DE  +L+ 
Sbjct: 242 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVA 301

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G  P+  TY+ L+   C  GR++ A  +   M         +SY  LI+  CK  
Sbjct: 302 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 361

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++ A+ +   M+S G  PD+V +NT+   L +     +A ++F++++  G   +  +Y 
Sbjct: 362 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 421

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T I  L   G    A+ +   +     + D   YNSLI  LC+ G +E A+ L   +   
Sbjct: 422 TMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 481

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P V++Y+I++ GLC   ++D A  +F +M E    PN  T+ +LI G       ++ 
Sbjct: 482 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA 541

Query: 434 IELLHKMKEINVMPDAS 450
           +EL + +   +V+   S
Sbjct: 542 MELANSLFSRDVISQDS 558



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 182/366 (49%), Gaps = 1/366 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ +  T +I G      ++KA  ++ ++ + + +P+V  Y +VI GFC       A ++
Sbjct: 101 PDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNRIEAATQV 159

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M  +G  P++VT+N+++  LC   K+  A ++LD ++     P   TY  L++   +
Sbjct: 160 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIV 219

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G +N A +L   M + G    +++Y+ +I G CK   +E A  L + + SKG KPDV+ 
Sbjct: 220 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVIS 279

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L        + +   KL  EM   G   +  TY   I  LC+ G I EA+ +   + 
Sbjct: 280 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 339

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +   D  +Y+ LI  LCK GRL++A+ +   +     +P++V Y+ ++  LC +G  +
Sbjct: 340 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 399

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A ++F  +      PNV +++ +I       + S+ + ++  M    V PD    + ++
Sbjct: 400 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLI 459

Query: 457 DLLAKN 462
             L ++
Sbjct: 460 SCLCRD 465



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 152/318 (47%), Gaps = 1/318 (0%)

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A  +NE+      ++++G  P+V+    ++        +++ASR+++++  H   PD 
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH-TEPDV 137

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
           F YN ++ GFC   R+  A ++   M++ G    + +Y+I+I   C  +++  AL +  +
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           +L     P V+ +  L         +  A KL +EM   G+  D +TY   I G+CK G 
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A EL  +L    C+ D+ +YN L+      G+ +   +L   +      PN VTYSI
Sbjct: 258 VERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 317

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  LC  G++D+A  +   M E  + P+  ++D LI    +       I ++  M    
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377

Query: 445 VMPDASIVSIVVDLLAKN 462
            +PD    + ++  L KN
Sbjct: 378 CLPDIVNYNTILAALCKN 395



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 115/231 (49%), Gaps = 6/231 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL  +++   TPD  ++  LI  LC E R+  A  +   +   GC PD+  Y
Sbjct: 326 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 385

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++  LC+  +   AL +F ++       G+ C PN  +Y T+I  L   G   +A  +
Sbjct: 386 NTILAALCKNGNANQALEIFNKLR------GMGCPPNVSSYNTMISALWSCGDRSRALGM 439

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M  K + P+ +TY S+I   C      EA  L  +M   G +P V+++N+++  LCK
Sbjct: 440 VPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 499

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
             ++D+A  +   MI+ G RP+  TY  L++G    G    A EL  S+ S
Sbjct: 500 VRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 550



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 104/199 (52%), Gaps = 6/199 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     ++  ++ +   PD V + +++  LC      +A  +F KLR  GC P+V +Y
Sbjct: 361 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 420

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++ L        AL +   M +     GV  +P+ +TY ++I  LC++G V++A  L
Sbjct: 421 NTMISALWSCGDRSRALGMVPAMISK----GV--DPDEITYNSLISCLCRDGLVEEAIGL 474

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+    +P V++Y  V+ G C  +  ++A  +F EM+++G +PN  T+ ++++ +  
Sbjct: 475 LDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGF 534

Query: 182 NGKMDEASRLLDLMIQHGV 200
            G   EA  L + +    V
Sbjct: 535 AGWRTEAMELANSLFSRDV 553


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 235/464 (50%), Gaps = 29/464 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V  G  ++     +   P+ V +  +I G C +  +  A  +F +L++ G  P + T
Sbjct: 218 VGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLET 277

Query: 61  YTTLVNGLCRTSH-----------TIVALNL----FEEMANGNGEFGVV----------- 94
           Y  L++G C+               ++ LN+    F  + +   ++G+V           
Sbjct: 278 YGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMT 337

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
              CEP+  TY  +I+  C  G + +A+E L + K++ + PN  +YT ++  +C   D+ 
Sbjct: 338 EMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYV 397

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
            A  +  ++ + G +P++V++   +      G++D A  + + M++ GV PDA  YN L+
Sbjct: 398 MASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLM 457

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C  GR   AK L   M  +  +   + Y+ L++G+ +N E++ A  L+  ++SKGI 
Sbjct: 458 SGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGID 517

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P VV +N +  GL +  ++  A    ++M+    A D +T+ T IDG  K   +  A+++
Sbjct: 518 PGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKM 577

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +   K + ++ AY SLI+G CK   +  A ++FR++    L PNVVTY+I+IGG   
Sbjct: 578 FGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSK 637

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            G+ +KA   F  M  N  +PN  TF  LI G   I   + +IE
Sbjct: 638 TGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIE 681



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 220/488 (45%), Gaps = 48/488 (9%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP------DVFTYTTLVNGL 68
           L +CF P  V   SL+  L    ++  A  L+ K+   G +       D ++   +V GL
Sbjct: 157 LYNCF-PCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGL 215

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C          L ++   GNG     C PN V Y  IIDG CK+G + +A  +  ++K K
Sbjct: 216 CDVGKVEEGRKLIDDRW-GNG-----CVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLK 269

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
              P + TY ++I GFC A  +    +L  EM   G+  NV  FN I+D   K G +D+A
Sbjct: 270 GFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKA 329

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           + ++ +M + G  PD  TYN L++  C  GR+  A+E     +        FSY+ L++ 
Sbjct: 330 AEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHA 389

Query: 249 YCKN-----------------------------------KEIEGALSLYSEMLSKGIKPD 273
           YCK                                     EI+ AL +  +M+ KG+ PD
Sbjct: 390 YCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPD 449

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
             I+N L  GL +  +   A  L  EM    +  D + Y T +DG  +N  + +A ELF 
Sbjct: 450 AQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFE 509

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +     +  +  YN +I GLCK G++  A+     +      P+  T+S +I G     
Sbjct: 510 VVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQH 569

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            +D A  +F  M +    PNV+ +  LI GF +I + S+  ++   M+  N+ P+    +
Sbjct: 570 DLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYT 629

Query: 454 IVVDLLAK 461
           I++   +K
Sbjct: 630 ILIGGFSK 637



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 178/371 (47%), Gaps = 7/371 (1%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N V Y++++  + K     + + +L  MK++N KP +    SVI  +      ++A ++F
Sbjct: 92  NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151

Query: 158 IEMMD-QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG------VRPDAFTYNTL 210
             + +     P VV  N +++ L KNGK+D A  L D M++ G      +  D ++   +
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIV 211

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           + G C  G+V   ++L       GC   V  Y+++I+GYCK  +++ A  ++ E+  KG 
Sbjct: 212 VKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF 271

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P +  +  L  G  +  + +   +L +EM   G+  +   + + ID   K G + +A E
Sbjct: 272 LPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAE 331

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +   +  + CE DI  YN LI+  C  GR++ A E         L+PN  +Y+ ++   C
Sbjct: 332 MMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYC 391

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             G    A D+   + E    P+++++   I G +   E    + +  KM E  V PDA 
Sbjct: 392 KQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQ 451

Query: 451 IVSIVVDLLAK 461
           I ++++  L K
Sbjct: 452 IYNVLMSGLCK 462



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 159/335 (47%), Gaps = 20/335 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    +V  ++++    PDA  +  L+ GLC + R   A  L +++     +PD + Y
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMY 488

Query: 62  TTLVNGLCRTSHTIVALNLFEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            TLV+G  R +    A  LFE  M+ G        +P  V Y  +I GLCK G +  A  
Sbjct: 489 ATLVDGFIRNNELDKATELFEVVMSKG-------IDPGVVGYNVMIKGLCKCGKMTDAVS 541

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            + +MK  N  P+  T+++VI G+    D + A ++F +MM Q  +PNVV +  +++  C
Sbjct: 542 YVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFC 601

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   M  A ++   M    + P+  TY  L+ GF  TG+   A   F  M    C     
Sbjct: 602 KIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDT 661

Query: 241 SYSILINGYC----------KNKEIEGALSL--YSEMLSKGIKPDVVIHNTLFVGLFEIH 288
           ++  LING            KN+E + +L L  ++ M+S+G    +  +N++ V L +  
Sbjct: 662 TFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHG 721

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            V+ A  L  +M R G   D+  +   + GLC+ G
Sbjct: 722 MVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTG 756



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 53/283 (18%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++     P  V +  +IKGLC   ++ +A +   K+++    PD +T++T+++G  +   
Sbjct: 511 VMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHD 570

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL +F +M           +PN V YT++I+G CK   + +A+++   M+  N++PN
Sbjct: 571 LDSALKMFGQMMKQK------YKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPN 624

Query: 134 VVTYTSVIRGF--------------------CYAKDWN---------------------- 151
           VVTYT +I GF                    C   D                        
Sbjct: 625 VVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNE 684

Query: 152 EAKR-----LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           E  R      F  M+ +G    + T+N I+  LCK+G +D A  L   M++ G   D+  
Sbjct: 685 ENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVC 744

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           ++ LL G C TG+    + +     +     T F YS+ ++ Y
Sbjct: 745 FSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKY 787


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 239/486 (49%), Gaps = 43/486 (8%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
             V+  ++ K   +P++VTF+ LI+       + +A   + K+ V G  P VF   T++ 
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G  +      AL LF+E    + E G+    N     TI+  LCK+G  D+A ELL +M+
Sbjct: 418 GWLKGQKHEEALKLFDE----SFETGLA---NVFVCNTILSWLCKQGKTDEATELLSKME 470

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            + I PNVV+Y +V+ G C  K+ + A+ +F  ++++G++PN  T+++++D   +N    
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM---------------- 230
            A  +++ M    +  +   Y T+++G C  G+ + A+EL  +M                
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSI 590

Query: 231 -----------------ESM---GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
                            E M   G    V +Y+ L+NG CKN  ++ AL +  EM +KG+
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGV 650

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           K D+  +  L  G  +   +E A  LF E+   G+      Y + I G    G +V A++
Sbjct: 651 KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALD 710

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L+  +       D+  Y +LIDGL K G L +A EL+  +    LVP+ + Y++++ GL 
Sbjct: 711 LYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLS 770

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             GQ  K   +F +M++N V PNV+ ++ +I G  R     +   L  +M +  ++PD +
Sbjct: 771 KKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGA 830

Query: 451 IVSIVV 456
              I+V
Sbjct: 831 TFDILV 836



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 222/410 (54%), Gaps = 7/410 (1%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           +++  LC + +  EA  L +K+   G  P+V +Y  ++ G CR  +  +A  +F  +   
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL-- 505

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
             E G+  +PN  TY+ +IDG  +      A E++  M   NI+ N V Y ++I G C  
Sbjct: 506 --EKGL--KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561

Query: 148 KDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
              ++A+ L   M+++  +  + +++N I+D   K G+MD A    + M  +G+ P+  T
Sbjct: 562 GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVIT 621

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y +L++G C   R++ A E+   M++ G K  + +Y  LI+G+CK   +E A +L+SE+L
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +G+ P   I+N+L  G   +  +  A  L+ +M ++G+  D  TY T IDGL K+G ++
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            A EL+  ++ +    D   Y  +++GL K G+    +++F  +    + PNV+ Y+ +I
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            G   +G +D+A  L  +M +  ++P+  TFD+L+ G +   +P +   L
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 240/482 (49%), Gaps = 43/482 (8%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K    P   T+TS+I     +  + +A  L  ++   G   +V   T+L+ G C+ +  +
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLV 356

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            AL LF++M            PN+VT++ +I+   K G ++KA E   +M+   + P+V 
Sbjct: 357 SALVLFDKMEKEGP------SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
              ++I+G+   +   EA +LF E  + G+  NV   N I+  LCK GK DEA+ LL  M
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKM 469

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ P+  +YN ++ G C    ++ A+ +F ++   G K   ++YSILI+G  +N + 
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDE 529

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL------------------- 296
           + AL + + M S  I+ + V++ T+  GL ++ Q  +A +L                   
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589

Query: 297 -----------------FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
                            ++EM  NG++ +  TY + ++GLCKN  + +A+E+   ++   
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + DI AY +LIDG CK   +E A  LF  L    L P+   Y+ +I G  N G M  A 
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           DL+  M ++ +  ++ T+  LI G ++        EL  +M+ + ++PD  I +++V+ L
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769

Query: 460 AK 461
           +K
Sbjct: 770 SK 771



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 223/470 (47%), Gaps = 40/470 (8%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT   L++    E +  EA  + ++    G EPD   Y+  V   C+T    +A +L 
Sbjct: 232 DNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLL 291

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM         +C P+  TYT++I    K+G +D A  L  +M    I  NVV  TS+I
Sbjct: 292 REMKEKK-----LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLI 346

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C   D   A  LF +M  +G  PN VTF+V+++   KNG+M++A      M   G+ 
Sbjct: 347 TGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406

Query: 202 PDAFTYNTLLDGF----------------------------------CLTGRVNHAKELF 227
           P  F  +T++ G+                                  C  G+ + A EL 
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELL 466

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             MES G    V SY+ ++ G+C+ K ++ A  ++S +L KG+KP+   ++ L  G F  
Sbjct: 467 SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTLRILKCEFDIRA 346
           H  + A ++ + M  + +  +   Y+T I+GLCK G   +A EL  + +   +      +
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           YNS+IDG  K G ++ A+  +  +    + PNV+TY+ ++ GLC + +MD+A ++  +M+
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
              V  ++  +  LI GF + +       L  ++ E  + P   I + ++
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 201/450 (44%), Gaps = 39/450 (8%)

Query: 49  LRVFGCEPDVFTYTT--LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTII 106
           + +    P+ +   +  L+  +  ++ T +A  L  ++ +    FG   E N+  +  ++
Sbjct: 113 IHILVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGF--EVNSRAFNYLL 170

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           +   K+   D A +++ QM + ++ P        +          EAK L+  M+  GV 
Sbjct: 171 NAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVD 230

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
            + VT  ++M    +  K  EA  +L   I+ G  PD+  Y+  +   C T  +  A  L
Sbjct: 231 GDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSL 290

Query: 227 FVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
              M E   C  +  +Y+ +I    K   ++ A+ L  EMLS GI  +VV   +L  G  
Sbjct: 291 LREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC 350

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL------- 338
           + + +  A  LFD+M++ G + ++ T+   I+   KNG + +A+E +  + +L       
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410

Query: 339 -------------KCEFDIRAY--------------NSLIDGLCKSGRLEIALELFRSLP 371
                        K E  ++ +              N+++  LCK G+ + A EL   + 
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKME 470

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + PNVV+Y+ ++ G C    MD AR +F ++ E  + PN  T+ +LI G  R ++  
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +E+++ M   N+  +  +   +++ L K
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIINGLCK 560


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/412 (32%), Positives = 212/412 (51%), Gaps = 6/412 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +     V+  + ++   PD  T+  LI GLC E RI EA  L  ++      PDV +
Sbjct: 291 MGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVS 350

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG    S    A  L EEM+    E GV  +PN VT+  ++   CKEG +D A  
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMS----EKGV--KPNAVTHNIMVKWYCKEGKMDDASN 404

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            + +M++    P+ VTY ++I G+C A +  EA R   EM  + ++ + VT N I+  LC
Sbjct: 405 TITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLC 464

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  K++EA +LL    + G   D  +Y TL+ G+   G V+ A +L+  M+      +  
Sbjct: 465 REKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTV 524

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I G C+  + E A+S  +E+L  G+ PD   +NT+  G      VE+AF+  ++M
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             N    D +T    + GLC  G + +A++LF+T        D   YN+LI  LCK GRL
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRL 644

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           + A  L   +    L P+  TY+ +I  L + G++ +A +    M E   +P
Sbjct: 645 DDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 234/458 (51%), Gaps = 9/458 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPDV 58
           G+  H F +  ++ +    P+ +T  +L+  L    +   +  +   F      G  P+V
Sbjct: 149 GQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNV 208

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            T+  ++ G C  +    A+     M   N      C P+ VTY TI+D LCK+G +  A
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYN------CSPDNVTYNTILDALCKKGRLGDA 262

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           ++LL+ MK + + PN  TY  ++ G+C      EA  +   M    + P+V T+N++++ 
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LC  G+++EA +L D M    + PD  +YNTL++G     +++ A +L   M   G K  
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
             +++I++  YCK  +++ A +  ++M   G  PD V +NTL  G  +   +  AF+  D
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM R  +  D+ T  T +  LC+   + EA +L  + R      D  +Y +LI G  K G
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            ++ AL+L+  +    ++P+ VTY+ +IGGLC  G+ ++A     ++ E+ ++P+  T++
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            ++ G+ R  +  K  +  +KM E +  PD    +I++
Sbjct: 563 TILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 222/446 (49%), Gaps = 6/446 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  +      P+  T+  L+ G C    + EAA +   +      PDV+TY
Sbjct: 257 GRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTY 316

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGLC       A  L +EM N      +   P+ V+Y T+I+G  +   + +A +L
Sbjct: 317 NMLINGLCNEGRIEEAFKLRDEMEN------LKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +K +KPN VT+  +++ +C     ++A     +M + G  P+ VT+N +++  CK
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G M EA R +D M +  ++ D+ T NT+L   C   ++  A +L  S    G      S
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LI GY K+  ++ AL L+ EM  K I P  V +N +  GL +  + E+A    +E+ 
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  D  TY T + G C+ G + +A +  + +     + D+   N L+ GLC  G LE
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLE 610

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL+LF +        + VTY+ +I  LC +G++D A +L  +MEE  + P+  T++ +I
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670

Query: 422 RGFIRINEPSKVIELLHKMKEINVMP 447
                     +  E + KM E   +P
Sbjct: 671 TALTDSGRIREAEEFMSKMLEKGXLP 696



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 194/436 (44%), Gaps = 73/436 (16%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG---FCYAKDW 150
           +  P+     T I    + G    A ++  +MK   ++PN++T  +++     +  +   
Sbjct: 130 LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV 189

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           + ++  F + +  G+ PNV TFN+++   C   K  +A   L++M ++   PD  TYNT+
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTI 249

Query: 211 LDGFCLTGRVNHAKELFVSMESMG---------------CK------------------- 236
           LD  C  GR+  A++L + M+S G               CK                   
Sbjct: 250 LDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 237 -HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V++Y++LING C    IE A  L  EM +  + PDVV +NTL  G  E  ++  AFK
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369

Query: 296 LFDEMQRNGV-----------------------------------AADTWTYRTFIDGLC 320
           L +EM   GV                                   + D  TY T I+G C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + EA      +     + D    N+++  LC+  +LE A +L  S        + V
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV 489

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y  +I G   DG +D+A  L+ +M+E  ++P+ +T++ +I G  +  +  + I  L+++
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549

Query: 441 KEINVMPDASIVSIVV 456
            E  ++PD +  + ++
Sbjct: 550 LESGLLPDETTYNTIL 565



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 164/333 (49%), Gaps = 3/333 (0%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS-- 189
           P+     + I  +  +   + A ++F +M    ++PN++T N +++ L +       S  
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 190 -RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
               +  I+ G+ P+  T+N ++ G+CL  +   A E    M    C     +Y+ +++ 
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CK   +  A  L  +M S+G+ P+   +N L  G  ++  ++ A  + + M +N +  D
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            WTY   I+GLC  G I EA +L   +  LK   D+ +YN+LI+G  +  ++  A +L  
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    + PN VT++IM+   C +G+MD A +    MEE+   P+ +T++ LI G+ +  
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              +    + +M   N+  D+  ++ ++  L +
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 141/273 (51%), Gaps = 3/273 (1%)

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING--- 248
           L L I     P     +T +  +  +G+ +HA ++F  M+ +  +  + + + L+N    
Sbjct: 123 LHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVR 182

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           Y  +  +  +   +++ +  GI P+V   N +  G    ++ + A +  + M +   + D
Sbjct: 183 YPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPD 242

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY T +D LCK G + +A +L   ++      +   YN L+ G CK G L+ A  +  
Sbjct: 243 NVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE 302

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L+P+V TY+++I GLCN+G++++A  L  +ME   ++P+V++++ LI G +  +
Sbjct: 303 LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWS 362

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + S+  +LL +M E  V P+A   +I+V    K
Sbjct: 363 KISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK 395



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 29/236 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+       L  +L+S   PD  T+ +++ G C E  + +A     K+     +PDVFT 
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTC 596

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLC       AL LF    +           +TVTY T+I  LCKEG +D A  L
Sbjct: 597 NILLRGLCMEGMLEKALKLFNTWVSKGKAI------DTVTYNTLITSLCKEGRLDDAFNL 650

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN------------- 168
           L +M++K + P+  TY ++I     +    EA+    +M+++G  P              
Sbjct: 651 LSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVT 710

Query: 169 ----------VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
                      V ++  + ELC  GK  +A R+     Q G+  D  TY  L+DG 
Sbjct: 711 SETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 29/206 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F    +++++ F PD  T   L++GLC E  + +A  LF      G   D  TY
Sbjct: 572 GDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTY 631

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  LC+      A NL  EM     E G    P+  TY  II  L   G + +A+E 
Sbjct: 632 NTLITSLCKEGRLDDAFNLLSEMEEK--ELG----PDHYTYNAIITALTDSGRIREAEEF 685

Query: 122 LLQMKDKNIKPN-----------------------VVTYTSVIRGFCYAKDWNEAKRLFI 158
           + +M +K   P                         V Y+  I+  C    + +A R+F 
Sbjct: 686 MSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFG 745

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGK 184
           E   +G+  +  T+  +MD L K  K
Sbjct: 746 ESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 238/464 (51%), Gaps = 9/464 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V   +     +      PD VT+T+LI  LC   R+ EA  LF +L +    P V+ 
Sbjct: 286 VGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYA 345

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T++ G         A +L E            C P+ + Y  I+  L ++G V++A  
Sbjct: 346 YNTMIMGYGSAGKFDEAYSLLERQKRKG------CIPSVIAYNCILTCLGRKGKVEEALR 399

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M+ ++  PN+ TY  +I   C A +   A ++   M + G+ PN++T N+++D LC
Sbjct: 400 IHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLC 458

Query: 181 KNGKMDEASRLLDLMIQHGV-RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           K  K+DEA  +  L + H V  PD+ T+ +L+DG    GRV+ A  L+  M        V
Sbjct: 459 KAQKLDEACSIF-LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNV 517

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+ LI  + K    E    +Y EM+ +G  PD+++ N+    +F+  +VE+   LF+E
Sbjct: 518 VVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEE 577

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           ++  G+  D  +Y   I GL K G+  E  +LF+ ++      D+ AYN++IDG CKSG+
Sbjct: 578 IKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGK 637

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A +L   +    L P VVTY  ++ GL    ++D+A  LF + +   V  NV+ +  
Sbjct: 638 VDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSS 697

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           LI GF ++    +   +L ++ +  + P++   + ++D L K E
Sbjct: 698 LIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAE 741



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 236/463 (50%), Gaps = 27/463 (5%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ +T   +I  LC   ++ EA ++F  L    C PD  T+ +L++GL R      A +L
Sbjct: 445 PNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSL 504

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           +E+M + +        PN V YT++I    K G  +   ++  +M  +   P+++   S 
Sbjct: 505 YEKMLDSDQI------PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSY 558

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +     A +  + + LF E+  QG+ P+V ++++++  L K G   E  +L   M + G+
Sbjct: 559 MDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGL 618

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D   YNT++DGFC +G+V+ A +L   M++ G + TV +Y  +++G  K   ++ A  
Sbjct: 619 HLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYM 678

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ E  S G+  +VVI+++L  G  ++ +++ A+ + +E+ + G+  +++T+   +D L 
Sbjct: 679 LFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALV 738

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   I EA   F  ++ LKC  +   Y+ +I+GLC   +   A   ++ +    L PN +
Sbjct: 739 KAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNI 798

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF---------------- 424
           TY+ MI GL   G + +AR LF   + +  VP+   ++ +I G                 
Sbjct: 799 TYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEET 858

Query: 425 ----IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
                R+N  + V+ LL  + + + +  A+IV  V+  +AK++
Sbjct: 859 RLKGCRVNSKTCVV-LLDALHKADCLEQAAIVGAVLREMAKSQ 900



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 225/460 (48%), Gaps = 7/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+    + +L R  +    P  + +  ++  L  + ++ EA  +  ++R     P++ TY
Sbjct: 357 GKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTY 415

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ LC+      AL + + M    G F     PN +T   +ID LCK   +D+A  +
Sbjct: 416 NILIDMLCKAGELEAALKVQDTMKEA-GLF-----PNIMTVNIMIDRLCKAQKLDEACSI 469

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L +  K   P+  T+ S+I G       ++A  L+ +M+D    PNVV +  ++    K
Sbjct: 470 FLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFK 529

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ ++  ++   M+  G  PD    N+ +D     G V   + LF  +++ G    V S
Sbjct: 530 CGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRS 589

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILI+G  K         L+ EM  +G+  DV+ +NT+  G  +  +V++A++L +EM+
Sbjct: 590 YSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+     TY + +DGL K   + EA  LF   + +  + ++  Y+SLIDG  K GR++
Sbjct: 650 TKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID 709

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +   L    L PN  T++ ++  L    ++D+A+  F +M+     PN +T+ ++I
Sbjct: 710 EAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMI 769

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G   I + +K      +M++  + P+    + ++  LAK
Sbjct: 770 NGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAK 809



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 209/450 (46%), Gaps = 7/450 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+       ++ EA  +   +R F   P    YTTL+  L   +     L LF +M    
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQ--- 230

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
            E G   E N   +TT++    +EG +D A  LL +MK  +   ++V Y   I  F    
Sbjct: 231 -EIGY--EANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVG 287

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
             + A + F EM  QG+ P+ VT+  ++  LCK  ++DEA  L + +  +   P  + YN
Sbjct: 288 KVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYN 347

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           T++ G+   G+ + A  L    +  GC  +V +Y+ ++    +  ++E AL ++ EM  +
Sbjct: 348 TMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQ 406

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
              P++  +N L   L +  ++E A K+ D M+  G+  +  T    ID LCK   + EA
Sbjct: 407 DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEA 466

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
             +F  L    C  D R + SLIDGL + GR++ A  L+  +     +PNVV Y+ +I  
Sbjct: 467 CSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQN 526

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               G+ +    ++ +M      P+++  +  +    +  E  K   L  ++K   ++PD
Sbjct: 527 FFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPD 586

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
               SI++  L K   S  +   F   ++Q
Sbjct: 587 VRSYSILIHGLVKAGFSRETYKLFYEMKEQ 616



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 187/401 (46%), Gaps = 9/401 (2%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V+    +V  + RT +      + EEM+     FG+    N V+   ++    K   +
Sbjct: 133 PEVYNAFLMV--MARTRNLDYLEQILEEMSVAG--FGL---SNHVS-VELVASFVKSHKL 184

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            +A  ++  M+    +P    YT++I     A   +    LF +M + G + NV  F  +
Sbjct: 185 KEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTL 244

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +    + G++D A  LLD M  +    D   YN  +D F   G+V+ A + F  M++ G 
Sbjct: 245 VRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGL 304

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                +Y+ LI   CK + ++ A+ L+ E+      P V  +NT+ +G     + + A+ 
Sbjct: 305 VPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYS 364

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L +  +R G       Y   +  L + G + EA+ +   +R      ++  YN LID LC
Sbjct: 365 LLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLC 423

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K+G LE AL++  ++    L PN++T +IMI  LC   ++D+A  +FL ++     P+  
Sbjct: 424 KAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSR 483

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           TF  LI G  R         L  KM + + +P+  + + ++
Sbjct: 484 TFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLI 524



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/363 (21%), Positives = 154/363 (42%), Gaps = 19/363 (5%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           + K + ++  V     V+    +  D  EA  +F EM     QP V+    +M  L    
Sbjct: 61  EAKVEGMRKTVYDLCGVLENGLWGPDVEEALNVFDEM----SQPEVIVG--VMKRLKDVN 114

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
              +  R ++   Q    P+   YN  L     T  +++ +++   M   G   +     
Sbjct: 115 VAFQYFRWVERKTQQAHCPE--VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSV 172

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            L+  + K+ +++ A  +   M     +P    + TL   L   ++ +    LF +MQ  
Sbjct: 173 ELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEI 232

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G  A+   + T +    + G I  A+ L   ++      D+  YN  ID   K G++++A
Sbjct: 233 GYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMA 292

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            + F  +    LVP+ VTY+ +IG LC   ++D+A +LF +++ N  VP V  ++ +I G
Sbjct: 293 WKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMG 352

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK-----------NEISLNSLPSF 472
           +    +  +   LL + K    +P     + ++  L +           +E+  ++ P+ 
Sbjct: 353 YGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNL 412

Query: 473 TVH 475
           T +
Sbjct: 413 TTY 415



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   +++L  +++   TP++ T+  L+  L     I EA   F  ++   C P+  T
Sbjct: 705 VGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMT 764

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ ++NGLC       A   ++EM           +PN +TYTT+I GL K G V +A+ 
Sbjct: 765 YSIMINGLCMIRKFNKAFVFWQEMQKQG------LKPNNITYTTMIAGLAKAGNVMEARG 818

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + K     P+   Y ++I G   A    +A  +F E   +G + N  T  V++D L 
Sbjct: 819 LFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALH 878

Query: 181 KNGKMDEAS 189
           K   +++A+
Sbjct: 879 KADCLEQAA 887


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 234/469 (49%), Gaps = 29/469 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-----VFGCEP 56
           GR+         + + C +P+ +T+ +++ GLC  +RI E   LF  +        GCEP
Sbjct: 48  GRIDEALEQFKSMGEEC-SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEP 106

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           DV +Y+T+++ LC+      A   F+ M        V C PN VTY+++IDGLCK   VD
Sbjct: 107 DVISYSTVIDALCKAQRVDKAYEYFKRMR------AVGCAPNVVTYSSLIDGLCKVDRVD 160

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  LL+Q+K +++ P  + Y +V+ GF      +E   L + M ++G   N++ FN ++
Sbjct: 161 EAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAML 220

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L KN + ++A +  + +++ G +P+  TYN  + G C  G+V+ A  + + M      
Sbjct: 221 HALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVT 280

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +YS +I+G+CK   ++ A  +++ M+     P  V   TL  G  E  +   AF++
Sbjct: 281 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 340

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            ++M   G      TY   +D +C    +  A+E++H ++  K + D   Y  LI  LC+
Sbjct: 341 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCR 400

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           + R++ A E    +    +VPN      ++  LC  G++D+A          +V+ NV+ 
Sbjct: 401 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEA---------CSVLDNVVE 451

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVDLLAKNEI 464
                    +  EP + +E++ +M    V PD A+ V+++  L   + +
Sbjct: 452 -------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRV 493



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 227/442 (51%), Gaps = 12/442 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           +T++I G C   ++ +A  L  +++  G + DV  ++TL+ GLCR      AL  F+ M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 60

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-----NIKPNVVTYTSV 140
                 G  C PN +TY T+++GLCK   +D+  EL   M+ +       +P+V++Y++V
Sbjct: 61  ------GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTV 114

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C A+  ++A   F  M   G  PNVVT++ ++D LCK  ++DEA  LL  +    +
Sbjct: 115 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDM 174

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P A  YN +++GF   G+ +   EL + M+  G    +  ++ +++   KN E E A  
Sbjct: 175 VPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 234

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            +  +L  G KP+VV +N    GL +  +V+ A+++  EM  + V  D  TY + IDG C
Sbjct: 235 FFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + +A ++F  + + +C      + +L+ G  +  +   A  +   +     +P + 
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 354

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY++++  +C    ++ A +++  M+     P+  T+  LI+   R     +  E L  M
Sbjct: 355 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVM 414

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
           +  NV+P+ +I   +V++L K 
Sbjct: 415 EADNVVPNGAICHALVEVLCKQ 436



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 202/389 (51%), Gaps = 6/389 (1%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           YTT+I+G CK G VD+A ELL +MK++ +K +V+ ++++I+G C     +EA   F  M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM-----IQHGVRPDAFTYNTLLDGFCL 216
           ++   PNV+T+N +++ LCK  ++DE   L D M       HG  PD  +Y+T++D  C 
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             RV+ A E F  M ++GC   V +YS LI+G CK   ++ A SL  ++  + + P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N +  G     +     +L   M+  G   +   +   +  L KN    +A + F  L 
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + ++  YN  + GLCK+G+++ A  +   +    + P+V+TYS +I G C  G+MD
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA D+F  M  +  +P+ +TF  L+ GF    +  +   +   M     +P     ++++
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLM 360

Query: 457 DLLAKNEISLNSLPSFTVHEQQEEVDESN 485
           D +   +   ++L  +   ++++   ++N
Sbjct: 361 DCVCGADSVESALEIYHKMKRKKRQPDAN 389



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 25/298 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   + +L  +++S  TPD +T++S+I G C   R+ +A  +FT++ V  C P   T+
Sbjct: 262 GKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 321

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G      +  A  + E+M N     G +  P   TY  ++D +C    V+ A E+
Sbjct: 322 MTLLHGFSEHKKSREAFRVHEDMVNA----GFI--PGLQTYNVLMDCVCGADSVESALEI 375

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD---- 177
             +MK K  +P+  TY  +I+  C A+  +EAK     M    V PN    + +++    
Sbjct: 376 YHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 435

Query: 178 ---------------ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
                          E+CK G+ DEA  +++ M+  GVRPD  TY  +L   C   RV+ 
Sbjct: 436 QGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDS 495

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           A   F  M S GC   + +Y++LI   C     + A  ++  M++ G  P      TL
Sbjct: 496 AIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 6/187 (3%)

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           ++ T+  G  +  QV++AF+L DEM+  GV  D   + T I GLC+ G I EA+E F ++
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELF-----RSLPCGVLVPNVVTYSIMIGGLC 390
              +C  ++  YN++++GLCK+ R++  LELF     R        P+V++YS +I  LC
Sbjct: 61  G-EECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
              ++DKA + F  M      PNV+T+  LI G  +++   +   LL ++K  +++P A 
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 451 IVSIVVD 457
             + VV+
Sbjct: 180 YYNAVVN 186



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 69/179 (38%), Gaps = 13/179 (7%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA T+  LI+ LC   R+ EA      +      P+      LV  LC+      A ++
Sbjct: 386 PDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSV 445

Query: 81  FEEMAN--GNGEFGVVCE-----------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
            + +      GE     E           P+  TY  ++  LC    VD A     +M  
Sbjct: 446 LDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMAS 505

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +   P +VTYT +I   C A   ++A R+F  M+  G  P   T   +   L   G  D
Sbjct: 506 RGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/415 (32%), Positives = 214/415 (51%), Gaps = 6/415 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +     V+  + ++   PD  T+  LI GLC E RI EA  L  ++      PDV +
Sbjct: 291 MGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVS 350

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG    S    A  L EEM+    E GV  +PN VT+  ++   CKEG +D A  
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMS----EKGV--KPNAVTHNIMVKWYCKEGKMDDASN 404

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            + +M++    P+ VTY ++I G+C A +  EA R   EM  + ++ + VT N I+  LC
Sbjct: 405 TITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLC 464

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +  K++EA +LL    + G   D  +Y TL+ G+   G V+ A +L+  M+      +  
Sbjct: 465 REKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTV 524

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I G C+  + E A+S  +E+L  G+ PD   +NT+  G      VE+AF+  ++M
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             N    D +T    + GLC  G + +A++LF+T        D   YN+LI  LCK GRL
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRL 644

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           + A  L   +    L P+  TY+ +I  L + G++ +A +    M E   +P+ +
Sbjct: 645 DDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 223/447 (49%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  +      P+  T+  L+ G C    + EAA +   +      PDV+TY
Sbjct: 257 GRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTY 316

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGLC       A  L +EM N      +   P+ V+Y T+I+G  +   + +A +L
Sbjct: 317 NMLINGLCNEGRIEEAFKLRDEMEN------LKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +K +KPN VT+  +++ +C     ++A     +M + G  P+ VT+N +++  CK
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G M EA R +D M +  ++ D+ T NT+L   C   ++  A +L  S    G      S
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LI GY K+  ++ AL L+ EM  K I P  V +N +  GL +  + E+A    +E+ 
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G+  D  TY T + G C+ G + +A +  + +     + D+   N L+ GLC  G LE
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLE 610

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL+LF +        + VTY+ +I  LC +G++D A +L  +MEE  + P+  T++ +I
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
                     +  E + KM E   +PD
Sbjct: 671 TALTDSGRIREAEEFMSKMLEKGNLPD 697



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 234/458 (51%), Gaps = 9/458 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPDV 58
           G+  H F +  ++ +    P+ +T  +L+  L    +   +  +   F      G  P+V
Sbjct: 149 GQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNV 208

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            T+  ++ G C  +    A+     M   N      C P+ VTY TI+D LCK+G +  A
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYN------CSPDNVTYNTILDTLCKKGRLGDA 262

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           ++LL+ MK + + PN  TY  ++ G+C      EA  +   M    + P+V T+N++++ 
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LC  G+++EA +L D M    + PD  +YNTL++G     +++ A +L   M   G K  
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
             +++I++  YCK  +++ A +  ++M   G  PD V +NTL  G  +   +  AF+  D
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM R  +  D+ T  T +  LC+   + EA +L  + R      D  +Y +LI G  K G
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            ++ AL+L+  +    ++P+ VTY+ +IGGLC  G+ ++A     ++ E+ ++P+  T++
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            ++ G+ R  +  K  +  +KM E +  PD    +I++
Sbjct: 563 TILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 194/436 (44%), Gaps = 73/436 (16%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG---FCYAKDW 150
           +  P+     T I    + G    A ++  +MK   ++PN++T  +++     +  +   
Sbjct: 130 LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV 189

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           + ++  F + +  G+ PNV TFN+++   C   K  +A   L++M ++   PD  TYNT+
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTI 249

Query: 211 LDGFCLTGRVNHAKELFVSMESMG---------------CK------------------- 236
           LD  C  GR+  A++L + M+S G               CK                   
Sbjct: 250 LDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 237 -HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V++Y++LING C    IE A  L  EM +  + PDVV +NTL  G  E  ++  AFK
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369

Query: 296 LFDEMQRNGV-----------------------------------AADTWTYRTFIDGLC 320
           L +EM   GV                                   + D  TY T I+G C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + EA      +     + D    N+++  LC+  +LE A +L  S        + V
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV 489

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y  +I G   DG +D+A  L+ +M+E  ++P+ +T++ +I G  +  +  + I  L+++
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549

Query: 441 KEINVMPDASIVSIVV 456
            E  ++PD +  + ++
Sbjct: 550 LESGLLPDETTYNTIL 565



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 141/273 (51%), Gaps = 3/273 (1%)

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING--- 248
           L L I     P     +T +  +  +G+ +HA ++F  M+ +  +  + + + L+N    
Sbjct: 123 LHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVR 182

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           Y  +  +  +   +++ +  GI P+V   N +  G    ++ + A +  + M +   + D
Sbjct: 183 YPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPD 242

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY T +D LCK G + +A +L   ++      +   YN L+ G CK G L+ A  +  
Sbjct: 243 NVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE 302

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L+P+V TY+++I GLCN+G++++A  L  +ME   ++P+V++++ LI G +  +
Sbjct: 303 LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWS 362

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + S+  +LL +M E  V P+A   +I+V    K
Sbjct: 363 KISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK 395



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 29/236 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+       L  +L+S   PD  T+ +++ G C E  + +A     K+     +PDVFT 
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTC 596

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLC       AL LF    +           +TVTY T+I  LCKEG +D A  L
Sbjct: 597 NILLRGLCMEGVLEKALKLFNTWVSKGKAI------DTVTYNTLITSLCKEGRLDDAFNL 650

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN------------- 168
           L +M++K + P+  TY ++I     +    EA+    +M+++G  P+             
Sbjct: 651 LSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVT 710

Query: 169 ----------VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
                      V ++  + ELC  GK  +A R+     Q G+  D  TY  L+DG 
Sbjct: 711 SETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 86/206 (41%), Gaps = 29/206 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F    +++++ F PD  T   L++GLC E  + +A  LF      G   D  TY
Sbjct: 572 GDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTY 631

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  LC+      A NL  EM     E G    P+  TY  II  L   G + +A+E 
Sbjct: 632 NTLITSLCKEGRLDDAFNLLSEMEEK--ELG----PDHYTYNAIITALTDSGRIREAEEF 685

Query: 122 LLQMKDKNIKPN-----------------------VVTYTSVIRGFCYAKDWNEAKRLFI 158
           + +M +K   P+                        V Y+  I+  C    + +A R+F 
Sbjct: 686 MSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFG 745

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGK 184
           E   +G+  +  T+  +MD L K  K
Sbjct: 746 ESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/442 (31%), Positives = 228/442 (51%), Gaps = 15/442 (3%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGC-----EPDVFTYTTLVNGLCRTSHTIVALN 79
           +F S++  +  E     A   +  L VFG      +P++ TY  ++  LC+      A++
Sbjct: 162 SFNSVLNVIIQEGDFSYAFKFY--LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 219

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            F EM   N      C P+  TY+T+++GLCKE  VD+A  LL +M+ +   PN VT+  
Sbjct: 220 TFREMPLKN------CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNV 273

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I       D + A +L   M  +G  PN VT+N ++  LC  GK+D+A  LL+ M+   
Sbjct: 274 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 333

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TY T+++G     R      + +SME  G K   + YS LI+G  K  + E A+
Sbjct: 334 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 393

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+ EM  KG KP+VV++     GL    + + A  +  EM   G   + +TY + + G 
Sbjct: 394 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 453

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K G   +A+ ++  +       ++   + L++GLC+SGRL  AL ++  +    L P+V
Sbjct: 454 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 513

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDM--EENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           V YS MI GLC+ G +DK   LF +M  +E    P+V+T+++L     R +  ++ I+LL
Sbjct: 514 VAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 573

Query: 438 HKMKEINVMPDASIVSIVVDLL 459
           + M +    PD+   +I ++ L
Sbjct: 574 NSMLDEGCDPDSLTCNIFLETL 595



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 186/354 (52%), Gaps = 8/354 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     +L  +      P+ VTF  LI  L     +  AA L   + + GC P+  TY 
Sbjct: 248 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYN 307

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++GLC       AL+L E+M +        C PN VTY TII+GL K+   +    +L
Sbjct: 308 TLIHGLCLKGKLDKALSLLEKMVSSK------CVPNQVTYGTIINGLVKQRRAEDGVHIL 361

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           + M+++  K N   Y+S+I G         A RL+ EM ++G +PNVV +   +D LC++
Sbjct: 362 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 421

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K DEA  +L  M+  G  P+AFTY++L+ GF   G    A  ++  M S   +H V   
Sbjct: 422 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCC 481

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-- 300
           S+L+NG C++  +  AL++++ ML +G+KPDVV ++++  GL ++  V++  KLF EM  
Sbjct: 482 SVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQC 541

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           Q      D  TY    + LC+   +  A++L +++    C+ D    N  ++ L
Sbjct: 542 QEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 175/339 (51%), Gaps = 3/339 (0%)

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM---DQGVQPNVVTFNVIMDELCKNG 183
           D + K  V ++ SV+       D++ A + ++ +     +G QPN++T+N+I+  LCK G
Sbjct: 153 DLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLG 212

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++D A      M      PD FTY+TL++G C   RV+ A  L   M++ GC     +++
Sbjct: 213 QIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFN 272

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +LI+   KN ++  A  L   M  KG  P+ V +NTL  GL    ++++A  L ++M  +
Sbjct: 273 VLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS 332

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
               +  TY T I+GL K     + V +  ++     + +   Y+SLI GL K G+ E A
Sbjct: 333 KCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENA 392

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           + L++ +      PNVV Y   I GLC D + D+A D+  +M     +PN  T+  L++G
Sbjct: 393 VRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKG 452

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           F +  +  K I +  +M   ++  +    S++++ L ++
Sbjct: 453 FFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 491



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 29/352 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L +++ S   P+ VT+ ++I GL  + R  +   +   +   G + + + Y
Sbjct: 317 GKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIY 376

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++GL +   +  A+ L++EMA         C+PN V Y   IDGLC++   D+A+++
Sbjct: 377 SSLISGLFKEGKSENAVRLWKEMAEKG------CKPNVVVYGAFIDGLCRDEKPDEAEDI 430

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  K   PN  TY+S+++GF    D  +A  ++ EMM Q ++ NVV  +V+++ LC+
Sbjct: 431 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 490

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT--V 239
           +G++ EA  +   M+  G++PD   Y++++ G C  G V+   +LF  M+    K    V
Sbjct: 491 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 550

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN--------------------- 278
            +Y+IL N  C+   +  A+ L + ML +G  PD +  N                     
Sbjct: 551 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLD 610

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            L V L +  +   A ++ +EM    +  +  T+   I   CK   I E ++
Sbjct: 611 ELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 662



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 3/261 (1%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSM---ESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           ++N++L+     G  ++A + ++ +    S G +  + +Y+++I   CK  +I+ A+  +
Sbjct: 162 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 221

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM  K   PDV  ++TL  GL +  +V+ A  L DEMQ  G   +  T+   ID L KN
Sbjct: 222 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 281

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G +  A +L   + +  C  +   YN+LI GLC  G+L+ AL L   +     VPN VTY
Sbjct: 282 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 341

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
             +I GL    + +    + + MEE     N   +  LI G  +  +    + L  +M E
Sbjct: 342 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 401

Query: 443 INVMPDASIVSIVVDLLAKNE 463
               P+  +    +D L ++E
Sbjct: 402 KGCKPNVVVYGAFIDGLCRDE 422



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 3/240 (1%)

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPDVVIHNTLFVGLFEIHQ 289
           + CK TV S++ ++N   +  +   A   Y  +    SKG +P+++ +N +   L ++ Q
Sbjct: 154 LHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQ 213

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           ++RA   F EM       D +TY T ++GLCK   + EAV L   ++   C  +   +N 
Sbjct: 214 IDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNV 273

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LID L K+G L  A +L  ++     VPN VTY+ +I GLC  G++DKA  L   M  + 
Sbjct: 274 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 333

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            VPN +T+  +I G ++       + +L  M+E     +  I S ++  L K   S N++
Sbjct: 334 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 393


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 234/466 (50%), Gaps = 6/466 (1%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +  V  G  +  R+     +P    +  LI GLC   ++ +A  LF ++      P + T
Sbjct: 565  LSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLIT 624

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y TL++G C+  +   +  + E M   N       EP+ +T+ T++ GL K G V+ A+ 
Sbjct: 625  YNTLIDGYCKDGNPEKSFKVRERMKADN------IEPSLITFNTLLKGLFKAGMVEDAEN 678

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            +L +MKD+   P+  T++ +  G+      + A  ++   +D G++ N  T +++++ LC
Sbjct: 679  VLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALC 738

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            K G++++A  +L   +  G+ P+   YNT++DG+   G +  A+    +ME  G K    
Sbjct: 739  KEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHL 798

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +Y+ LI  +C+  ++E A    ++M  KG+ P V  +N L  G    ++ ++ F L  EM
Sbjct: 799  AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEM 858

Query: 301  QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + NG   +  +Y T I+ LCK   ++EA  +   +       ++R YN LIDG C  G++
Sbjct: 859  EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKI 918

Query: 361  EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            E A      +    +  N+VTY+ +I GL  +G++ +A D+ L++    + P+V T++ L
Sbjct: 919  EDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSL 978

Query: 421  IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
            I G+       + I L  +MK   + P      +++ L  K  I L
Sbjct: 979  ISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIEL 1024



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 228/487 (46%), Gaps = 39/487 (8%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G     F V  R+      P  +TF +L+KGL     + +A  + T+++  G  PD FT+
Sbjct: 636  GNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTF 695

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            + L +G         AL ++E   +   +       N  T + +++ LCKEG ++KA+E+
Sbjct: 696  SILFDGYSSNDKADAALGVYETAVDSGLKM------NAYTCSILLNALCKEGQIEKAEEI 749

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L +   K + PN V Y ++I G+    D   A+     M  QG++P+ + +N ++   C+
Sbjct: 750  LGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCE 809

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             G M+ A + ++ M   GV P   TYN L+ G+      +   +L   ME  G    V S
Sbjct: 810  LGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVS 869

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            Y  LIN  CK  ++  A  +  +M  +G+ P+V I+N L  G     ++E AF+  +EM 
Sbjct: 870  YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMF 929

Query: 302  RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            + G+  +  TY T IDGL  NG + EA ++   +     + D+  YNSLI G   +G ++
Sbjct: 930  KKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQ 989

Query: 362  IALELFRSLPCGVLVPNVVTYSIMIGGLCND----------------------------- 392
              + L+  +    + P + TY ++I  LC                               
Sbjct: 990  RCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCY 1048

Query: 393  ---GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
               G MDKA +L   M E ++  +  T++ LI G +++ +  +V  L+ +MK   + P+A
Sbjct: 1049 AVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEA 1108

Query: 450  SIVSIVV 456
                I+V
Sbjct: 1109 DTYDIIV 1115



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 212/433 (48%), Gaps = 13/433 (3%)

Query: 29  LIKGLCAESR-IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           L+  L  ES+ I EAA LF  LR  G  P   + T L++ L +T    V +N+F  +   
Sbjct: 487 LLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 546

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
           +        P+   Y   I    K   V K  EL  +MK   I P V  Y  +I G C  
Sbjct: 547 D------FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKV 600

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           +   +A++LF EM+ + + P+++T+N ++D  CK+G  +++ ++ + M    + P   T+
Sbjct: 601 RQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITF 660

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           NTLL G    G V  A+ +   M+  G     F++SIL +GY  N + + AL +Y   + 
Sbjct: 661 NTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVD 720

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            G+K +    + L   L +  Q+E+A ++       G+  +   Y T IDG  + G +V 
Sbjct: 721 SGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVG 780

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A      +     + D  AYN LI   C+ G +E A +    +    + P+V TY+I+IG
Sbjct: 781 ARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIG 840

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE---LLHKMKEIN 444
           G     + DK  DL  +ME+N  +PNV+++  LI    +    SK++E   +   M++  
Sbjct: 841 GYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCK---GSKLLEAQIVKRDMEDRG 897

Query: 445 VMPDASIVSIVVD 457
           V P+  I ++++D
Sbjct: 898 VSPNVRIYNMLID 910



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 191/405 (47%), Gaps = 10/405 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P + + T L+  L    +      +F  +      P  F Y   +    + S     L L
Sbjct: 515 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 574

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  M +          P    Y  +IDGLCK   +  A++L  +M  + + P+++TY ++
Sbjct: 575 FNRMKHDR------ISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTL 628

Query: 141 IRGFCYAKDWNEAKRLFI--EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           I G+C  KD N  K   +   M    ++P+++TFN ++  L K G +++A  +L  M   
Sbjct: 629 IDGYC--KDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQ 686

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  PDAFT++ L DG+    + + A  ++ +    G K   ++ SIL+N  CK  +IE A
Sbjct: 687 GFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKA 746

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             +    ++KG+ P+ V++NT+  G      +  A    D M++ G+  D   Y   I  
Sbjct: 747 EEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRT 806

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+ G +  A +  + +++      +  YN LI G  +    +   +L + +     +PN
Sbjct: 807 FCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPN 866

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           VV+Y  +I  LC   ++ +A+ +  DME+  V PNV  ++MLI G
Sbjct: 867 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 211/453 (46%), Gaps = 13/453 (2%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G++     +LGR +     P+ V + ++I G   +  ++ A      +   G +PD   Y
Sbjct: 741  GQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAY 800

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              L+   C       A    E+  N     GV   P+  TY  +I G  ++   DK  +L
Sbjct: 801  NCLIRTFCELGDMENA----EQEVNKMKLKGV--SPSVETYNILIGGYGRKYEFDKCFDL 854

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L +M+D    PNVV+Y ++I   C      EA+ +  +M D+GV PNV  +N+++D  C 
Sbjct: 855  LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCS 914

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             GK+++A R  + M + G+  +  TYNTL+DG  + G++  A+++ + +   G K  VF+
Sbjct: 915  KGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFT 974

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            Y+ LI+GY     ++  ++LY EM + GIKP +  ++ L + L     +E   K+F EM 
Sbjct: 975  YNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH-LLISLCTKEGIELTKKIFGEMS 1033

Query: 302  RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
               +  D   Y   +     +G + +A  L   +       D   YNSLI G  K G+L 
Sbjct: 1034 ---LQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 1090

Query: 362  IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
                L   +    + P   TY I++ G C       A   + +M+E  ++ +V   D L+
Sbjct: 1091 EVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELV 1150

Query: 422  RGF---IRINEPSKVIELLHKMKEINVMPDASI 451
             G     R  E   VI  ++  K  +V+ D  +
Sbjct: 1151 SGLKEEWRSKEAENVISEMNGRKLGDVIVDEDL 1183



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 121/242 (50%)

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++ A +LF ++ + G   +  S ++L++   K K+    ++++  +L    +P   ++  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
                 ++  V +  +LF+ M+ + ++   + Y   IDGLCK   + +A +LF  +   +
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
               +  YN+LIDG CK G  E + ++   +    + P+++T++ ++ GL   G ++ A 
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           ++  +M++   VP+  TF +L  G+   ++    + +     +  +  +A   SI+++ L
Sbjct: 678 NVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNAL 737

Query: 460 AK 461
            K
Sbjct: 738 CK 739



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 9/245 (3%)

Query: 224 KELF--VSMESMGCKHTVFSY---SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           KELF   S+ S   KH  FSY   S+L+N   ++K I  A  L+  + ++GI P      
Sbjct: 466 KELFSAFSLSSPSLKHD-FSYLLLSVLLN---ESKMISEAADLFFALRNEGIFPSSDSLT 521

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L   L +  Q      +F  +  +      + Y   I    K   + + +ELF+ ++  
Sbjct: 522 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 581

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
           +    +  YN LIDGLCK  +++ A +LF  +    L+P+++TY+ +I G C DG  +K+
Sbjct: 582 RISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKS 641

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             +   M+ + + P++ITF+ L++G  +         +L +MK+   +PDA   SI+ D 
Sbjct: 642 FKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDG 701

Query: 459 LAKNE 463
            + N+
Sbjct: 702 YSSND 706


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 240/492 (48%), Gaps = 43/492 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++ +   +  ++ K   +P+ VT+  +I GLC   R+  A  L  K+ V G +P++ TY
Sbjct: 257 GKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTY 316

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEF-GVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             L+NGL       + LN F+++ +   E  G    PN V +  +IDG CK G ++ A +
Sbjct: 317 GALINGL-------IKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALK 369

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV--------------- 165
           +   M  KNI P  VT  S+++GFC +     A+    E++  G+               
Sbjct: 370 IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLC 429

Query: 166 --------------------QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                               +P+ +   +++  LCK+GK  EA+ L   +++ G      
Sbjct: 430 KKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKV 489

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T N L+ G C  G++  A  +   M   G      +Y+ LI G+C   ++EG   L  EM
Sbjct: 490 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 549

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             +GI+PD+  +N L  GL  + +++ A KL+DE + +G+ ++  TY   ++G CK   I
Sbjct: 550 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 609

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +   LF+ L   K E +   YN +I   C++G +  AL+L  ++    ++PN  TYS +
Sbjct: 610 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 669

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G+CN G ++ A+ L  +M +   VPNV+ +  LI G+ ++ +         +M   N+
Sbjct: 670 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNI 729

Query: 446 MPDASIVSIVVD 457
            P+    ++++D
Sbjct: 730 HPNKFTYTVMID 741



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 229/440 (52%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +     +   ++    TP +VT  SL++G C   +I  A     ++   G       
Sbjct: 361 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 420

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             ++V+ LC+      A    + M + N        P+ +  T ++ GLCK+G   +A E
Sbjct: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSRN------FRPSDLLLTMLVCGLCKDGKHLEATE 474

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  ++ +K    + VT  ++I G C A    EA R+  EM+++G+  + +T+N ++   C
Sbjct: 475 LWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFC 534

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             GK++   RL + M + G++PD +TYN LL G C  G+++ A +L+   ++ G    + 
Sbjct: 535 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 594

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y I++ GYCK   IE   +L++E+LSK ++ + +++N +     +   V  A +L + M
Sbjct: 595 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 654

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G+  +  TY + I G+C  G + +A  L   +R      ++  Y +LI G CK G++
Sbjct: 655 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 714

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A   +  +    + PN  TY++MI G C  G M+KA +L + M+E+ +VP+V+T+++L
Sbjct: 715 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 774

Query: 421 IRGFIRINEPSKVIELLHKM 440
             GF + N+     ++  +M
Sbjct: 775 TNGFCKANDMDNAFKVCDQM 794



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 217/442 (49%), Gaps = 16/442 (3%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F +L R  K  F P   T   L+  L   +   +   +F  +    C PDVF++T ++N 
Sbjct: 197 FYLLAR--KGTF-PSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINA 252

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           LC+      A+ LF +M     + G+   PN VTY  II+GLC+ G +D A EL  +M  
Sbjct: 253 LCKGGKMENAIELFMKME----KLGI--SPNVVTYNCIINGLCQNGRLDNAFELKEKMTV 306

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           K ++PN+ TY ++I G      +++   +  EM+  G  PNVV FN ++D  CK G ++ 
Sbjct: 307 KGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEG 366

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK-HTVFSYSILI 246
           A ++ D+MI   + P + T  +L+ GFC + ++ HA+     + S G   H    YS+ +
Sbjct: 367 ALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSV-V 425

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +  CK      A      MLS+  +P  ++   L  GL +  +   A +L+  +   G  
Sbjct: 426 HWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSP 485

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           A   T    I GLC  G + EA  +   +       D   YN+LI G C  G++E    L
Sbjct: 486 ASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRL 545

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
              +    + P++ TY+ ++ GLCN G++D A  L+ + + + ++ N+ T+ +++ G+ +
Sbjct: 546 REEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCK 605

Query: 427 INEPSKV----IELLHKMKEIN 444
            N    V     ELL K  E+N
Sbjct: 606 ANRIEDVENLFNELLSKKMELN 627



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 206/421 (48%), Gaps = 17/421 (4%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A  +F  L   G  P + T   L++ L + +       +F  M+ G       C P+  +
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEG------AC-PDVFS 245

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           +T +I+ LCK G ++ A EL ++M+   I PNVVTY  +I G C     + A  L  +M 
Sbjct: 246 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 305

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +GVQPN+ T+  +++ L K    D+ + +LD MI  G  P+   +N L+DG+C  G + 
Sbjct: 306 VKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIE 365

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPD---VVI 276
            A ++   M S     T  +   L+ G+CK+ +IE A +   E+LS G  I PD    V+
Sbjct: 366 GALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVV 425

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           H       F  H   R  K+   + RN   +D       + GLCK+G  +EA EL+  L 
Sbjct: 426 H--WLCKKFRYHSAFRFTKMM--LSRNFRPSDL-LLTMLVCGLCKDGKHLEATELWFRLL 480

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                      N+LI GLC +G+L  A  + + +    L  + +TY+ +I G CN+G+++
Sbjct: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 540

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
               L  +M +  + P++ T++ L+RG   + +    I+L  + K   ++ +     I++
Sbjct: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600

Query: 457 D 457
           +
Sbjct: 601 E 601



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 185/386 (47%), Gaps = 6/386 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R    F     +L   F P  +  T L+ GLC + + +EA  L+ +L   G      T  
Sbjct: 433 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 492

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++GLC       A  + +EM     E G+  +   +TY  +I G C EG V+    L 
Sbjct: 493 ALIHGLCGAGKLPEASRIVKEML----ERGLPMD--RITYNALILGFCNEGKVEGCFRLR 546

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  + I+P++ TY  ++RG C     ++A +L+ E    G+  N+ T+ ++M+  CK 
Sbjct: 547 EEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKA 606

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++++   L + ++   +  ++  YN ++   C  G V  A +L  +M+S G      +Y
Sbjct: 607 NRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATY 666

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           S LI+G C    +E A  L  EM  +G  P+VV +  L  G  ++ Q++ A   + EM  
Sbjct: 667 SSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 726

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  + +TY   IDG CK G + +A  L   ++      D+  YN L +G CK+  ++ 
Sbjct: 727 FNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDN 786

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGG 388
           A ++   +    L  + +TY+ ++ G
Sbjct: 787 AFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 138/277 (49%), Gaps = 29/277 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   F +   + K    PD  T+  L++GLC   ++ +A  L+ + +  G   ++ TY
Sbjct: 537 GKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTY 596

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV---------CE---------------- 96
             ++ G C+ +      NLF E+ +   E   +         C+                
Sbjct: 597 GIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 656

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN  TY+++I G+C  G V+ AK L+ +M+ +   PNVV YT++I G+C     + 
Sbjct: 657 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDT 716

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+  ++EM+   + PN  T+ V++D  CK G M++A+ LL  M + G+ PD  TYN L +
Sbjct: 717 AESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTN 776

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           GFC    +++A ++   M + G      +Y+ L++G+
Sbjct: 777 GFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 226/427 (52%), Gaps = 8/427 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      V  R++ +    D VT+  LI GLC    +  AA +++ +   G   DV  
Sbjct: 277 LGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSV 336

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+ G C    T  A   ++      G  G+       TY  +  GL   G V +A E
Sbjct: 337 YNSLIKGFCEVGRTGEAWKFWDS----TGFSGIR---QITTYNIMTKGLLDSGMVSEATE 389

Query: 121 LLLQMK-DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           LL Q++ D +  P+ VT+ ++I G C     N A  +  +  + G + +V +++ +++  
Sbjct: 390 LLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRF 449

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK+G+  +A+ +   M++ G +P++  YN L++GFC   ++N A ++++ M S GC  T+
Sbjct: 450 CKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTI 509

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+G CK ++ + A SL  EML +G KPD+  + +L  GL    +V+ A +++DE
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDE 569

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           +   G+  D   +   I GLC  G + EA  ++  ++   C  ++  YN+L+DG  + G 
Sbjct: 570 ILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGS 629

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A  L+ ++    L P++VTY+  I GLC+  +  +   L  ++    ++P VIT+ +
Sbjct: 630 IDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSI 689

Query: 420 LIRGFIR 426
           L+R  I+
Sbjct: 690 LVRAVIK 696



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 242/525 (46%), Gaps = 65/525 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +   + +    PD VT+++L+ GL    ++  A  L  ++  +G + D   Y
Sbjct: 172 GDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCY 231

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG----------------------EFGVVC---- 95
             L++G  RT     A+ ++E++    G                      E G V     
Sbjct: 232 NALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMM 291

Query: 96  ----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               + +TVTY  +I GLC+ G VD A  +   M    +  +V  Y S+I+GFC      
Sbjct: 292 ANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTG 351

Query: 152 EAKRLFIE------------------MMDQGV-----------------QPNVVTFNVIM 176
           EA + +                    ++D G+                  P+ VTF  ++
Sbjct: 352 EAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             LC+NG  + A  +L+     G   D F+Y+++++ FC  GR + A E++ +M   GCK
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCK 471

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
                Y+ LING+C+  +I  A+ +Y EM S G  P ++ +NTL  GL +  + + A  L
Sbjct: 472 PNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSL 531

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
             EM   G   D  TY + I GLC++  +  A+ ++  +     + D+  +N LI GLC 
Sbjct: 532 TKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCS 591

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +G+++ A  ++  +      PN+VTY+ ++ G    G +DKA  L+  + +N + P+++T
Sbjct: 592 AGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVT 651

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++  I+G    N   + + LL+++    +MP     SI+V  + K
Sbjct: 652 YNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 222/471 (47%), Gaps = 42/471 (8%)

Query: 33  LCAESRIMEAAALFTKLR----VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L A SR +   A     R    + GC P V ++ TL++   R      A   F  +++G 
Sbjct: 90  LSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHG- 148

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
             FG    PN  TY  I+  LC  G VD+A  L   ++ + + P+ VTY++++ G     
Sbjct: 149 -AFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH-GVRPDAFTY 207
             + A  L  EM + GVQ + V +N ++    + G  ++A ++ + +++  G  P+  TY
Sbjct: 208 QLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATY 267

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             +LDG C  GR   A E++  M +   +    +Y ILI+G C++ +++ A  +YS+M+ 
Sbjct: 268 KVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK 327

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV---------------------- 305
            G+  DV ++N+L  G  E+ +   A+K +D    +G+                      
Sbjct: 328 AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEA 387

Query: 306 -------------AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
                        + D  T+ T I GLC+NGY   A E+    R    E D+ +Y+S+I+
Sbjct: 388 TELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMIN 447

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
             CK GR   A E+++++      PN   Y+ +I G C   +++ A  ++++M  N   P
Sbjct: 448 RFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCP 507

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +IT++ LI G  +  +  +   L  +M E    PD    + ++  L +++
Sbjct: 508 TIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDK 558



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 171/340 (50%), Gaps = 7/340 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
            T+  + KGL     + EA  L  +L     C PD  T+ TL++GLC   +   A  + E
Sbjct: 369 TTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILE 428

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           +  N   E  V       +Y+++I+  CK+G    A E+   M     KPN   Y ++I 
Sbjct: 429 DARNSGEELDVF------SYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALIN 482

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           GFC     N+A +++IEM   G  P ++T+N ++D LCK  K  EAS L   M++ G +P
Sbjct: 483 GFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKP 542

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D  TY +L+ G C   +V+ A  ++  +   G +  V  ++ILI+G C   +++ A  +Y
Sbjct: 543 DIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIY 602

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM  K   P++V +NTL  G +EI  +++A  L+  +  NG+  D  TY T I GLC  
Sbjct: 603 LEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSC 662

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
               E V L + +        +  ++ L+  + K G ++I
Sbjct: 663 NRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQI 702



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 17/295 (5%)

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF----SYSILING 248
           DL    G  P   ++NTLLD F    R + A   F S+        +     +Y+I++  
Sbjct: 108 DLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRS 167

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C   +++ A+SL+S +  +G+ PD V ++TL  GL +  Q++ A  L DEM   GV AD
Sbjct: 168 LCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQAD 227

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
              Y   + G  + G   +A++++  L R      ++  Y  ++DGLCK GR + A E++
Sbjct: 228 AVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVW 287

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +       + VTY I+I GLC  G +D A  ++ DM +  +V +V  ++ LI+GF  +
Sbjct: 288 SRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEV 347

Query: 428 NEPSKVIEL--------LHKMKEINVMP----DASIVSIVVDLLAKNEISLNSLP 470
               +  +         + ++   N+M     D+ +VS   +LL + E   +  P
Sbjct: 348 GRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSP 402


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 213/405 (52%), Gaps = 6/405 (1%)

Query: 36  ESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC 95
           E+ + +  + F +L +    P +  +  ++  L +  H   A++L  +M           
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKG------I 96

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           EPN VT   +I+  C  G +  +  +L ++     +P+ +T  ++++G C   +   +  
Sbjct: 97  EPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLH 156

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
              +++ QG Q N V++  +++ LCK G+   A +LL ++     RPD   Y+T++DG C
Sbjct: 157 FHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLC 216

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
               VN A + F  M + G    V +YS LI G+C   ++ GA SL +EM+ K I P+V 
Sbjct: 217 KDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVY 276

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            +N L   L +  +V+ A KL  EM   G  AD  TY + +DGLCK+  + +A  LF  +
Sbjct: 277 TYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKM 336

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +    + +   Y +LIDGLCK GRL+ A +LF+ L       +V TY++MI GLC +G  
Sbjct: 337 KKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMF 396

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           DKA  +   ME+N  +PN +TFD++IR     +E  K  +LLH M
Sbjct: 397 DKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGM 441



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 186/335 (55%), Gaps = 6/335 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F VLG+ILK  + PD +T  +L+KGLC +  +  +     K+   G + +  +
Sbjct: 113 LGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVS 172

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  A+ L   + + +        P+ V Y+TIIDGLCK+  V++A +
Sbjct: 173 YGTLLNGLCKIGETRCAVKLLRMIEDRS------TRPDVVMYSTIIDGLCKDKIVNQAYD 226

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M  + I PNV+TY+++I GFC A     A  L  EM+ + + PNV T+N+++D LC
Sbjct: 227 FFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALC 286

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA +LL  M   G   D  TYN++LDG C +  ++ A  LF+ M+  G +   +
Sbjct: 287 KEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKY 346

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G CK   ++ A  L+  +L KG   DV  +N +  GL +    ++A  +  +M
Sbjct: 347 TYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKM 406

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           + NG   +  T+   I  L +     +A +L H +
Sbjct: 407 EDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGM 441



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 204/393 (51%), Gaps = 6/393 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+L    TP  + F  ++  L        A +L  ++ V G EP++ T   L+N  C   
Sbjct: 55  RLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLG 114

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               + ++  ++     + G   +P+T+T  T++ GLC +G V ++     ++  +  + 
Sbjct: 115 QMAFSFSVLGKIL----KLGY--QPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQM 168

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N V+Y +++ G C   +   A +L   + D+  +P+VV ++ I+D LCK+  +++A    
Sbjct: 169 NQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFF 228

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M   G+ P+  TY+TL+ GFCL G++  A  L   M        V++Y+ILI+  CK 
Sbjct: 229 SEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKE 288

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +++ A  L +EM  KG   DVV +N++  GL +   +++A  LF +M++ G+  + +TY
Sbjct: 289 GKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTY 348

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              IDGLCK G +  A +LF  L +  C  D+R YN +I GLCK G  + AL +   +  
Sbjct: 349 TALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMED 408

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
              +PN VT+ I+I  L    + DKA  L   M
Sbjct: 409 NGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGM 441



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 35/242 (14%)

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           ++  +S ++ +L     P ++    +   L ++     A  L  +M+  G+  +  T   
Sbjct: 46  VDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNI 105

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG--------------------- 353
            I+  C  G +  +  +   +  L  + D    N+L+ G                     
Sbjct: 106 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQG 165

Query: 354 --------------LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
                         LCK G    A++L R +      P+VV YS +I GLC D  +++A 
Sbjct: 166 FQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAY 225

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           D F +M    + PNVIT+  LI GF    +      LL++M   N+ P+    +I++D L
Sbjct: 226 DFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDAL 285

Query: 460 AK 461
            K
Sbjct: 286 CK 287



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 6/148 (4%)

Query: 323 GYIVE------AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           GY+V+      A+ L   + +   E ++   N LI+  C  G++  +  +   +      
Sbjct: 73  GYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQ 132

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+ +T + ++ GLC  G++ ++      +       N +++  L+ G  +I E    ++L
Sbjct: 133 PDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKL 192

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEI 464
           L  +++ +  PD  + S ++D L K++I
Sbjct: 193 LRMIEDRSTRPDVVMYSTIIDGLCKDKI 220


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/442 (31%), Positives = 228/442 (51%), Gaps = 15/442 (3%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGC-----EPDVFTYTTLVNGLCRTSHTIVALN 79
           +F S++  +  E     A   +  L VFG      +P++ TY  ++  LC+      A++
Sbjct: 138 SFNSVLNVIIQEGDFSYAFKFY--LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 195

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
            F EM   N      C P+  TY+T+++GLCKE  VD+A  LL +M+ +   PN VT+  
Sbjct: 196 TFREMPLKN------CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNV 249

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I       D + A +L   M  +G  PN VT+N ++  LC  GK+D+A  LL+ M+   
Sbjct: 250 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 309

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P+  TY T+++G     R      + +SME  G K   + YS LI+G  K  + E A+
Sbjct: 310 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 369

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+ EM  KG KP+VV++     GL    + + A  +  EM   G   + +TY + + G 
Sbjct: 370 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 429

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K G   +A+ ++  +       ++   + L++GLC+SGRL  AL ++  +    L P+V
Sbjct: 430 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 489

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDM--EENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           V YS MI GLC+ G +DK   LF +M  +E    P+V+T+++L     R +  ++ I+LL
Sbjct: 490 VAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 549

Query: 438 HKMKEINVMPDASIVSIVVDLL 459
           + M +    PD+   +I ++ L
Sbjct: 550 NSMLDEGCDPDSLTCNIFLETL 571



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 186/354 (52%), Gaps = 8/354 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     +L  +      P+ VTF  LI  L     +  AA L   + + GC P+  TY 
Sbjct: 224 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYN 283

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++GLC       AL+L E+M +        C PN VTY TII+GL K+   +    +L
Sbjct: 284 TLIHGLCLKGKLDKALSLLEKMVSSK------CVPNQVTYGTIINGLVKQRRAEDGVHIL 337

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           + M+++  K N   Y+S+I G         A RL+ EM ++G +PNVV +   +D LC++
Sbjct: 338 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 397

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K DEA  +L  M+  G  P+AFTY++L+ GF   G    A  ++  M S   +H V   
Sbjct: 398 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCC 457

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-- 300
           S+L+NG C++  +  AL++++ ML +G+KPDVV ++++  GL ++  V++  KLF EM  
Sbjct: 458 SVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQC 517

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           Q      D  TY    + LC+   +  A++L +++    C+ D    N  ++ L
Sbjct: 518 QEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 175/339 (51%), Gaps = 3/339 (0%)

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM---DQGVQPNVVTFNVIMDELCKNG 183
           D + K  V ++ SV+       D++ A + ++ +     +G QPN++T+N+I+  LCK G
Sbjct: 129 DLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLG 188

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++D A      M      PD FTY+TL++G C   RV+ A  L   M++ GC     +++
Sbjct: 189 QIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFN 248

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +LI+   KN ++  A  L   M  KG  P+ V +NTL  GL    ++++A  L ++M  +
Sbjct: 249 VLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS 308

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
               +  TY T I+GL K     + V +  ++     + +   Y+SLI GL K G+ E A
Sbjct: 309 KCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENA 368

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           + L++ +      PNVV Y   I GLC D + D+A D+  +M     +PN  T+  L++G
Sbjct: 369 VRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKG 428

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           F +  +  K I +  +M   ++  +    S++++ L ++
Sbjct: 429 FFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 467



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 29/352 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L +++ S   P+ VT+ ++I GL  + R  +   +   +   G + + + Y
Sbjct: 293 GKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIY 352

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++GL +   +  A+ L++EMA         C+PN V Y   IDGLC++   D+A+++
Sbjct: 353 SSLISGLFKEGKSENAVRLWKEMAEKG------CKPNVVVYGAFIDGLCRDEKPDEAEDI 406

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  K   PN  TY+S+++GF    D  +A  ++ EMM Q ++ NVV  +V+++ LC+
Sbjct: 407 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 466

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT--V 239
           +G++ EA  +   M+  G++PD   Y++++ G C  G V+   +LF  M+    K    V
Sbjct: 467 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 526

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN--------------------- 278
            +Y+IL N  C+   +  A+ L + ML +G  PD +  N                     
Sbjct: 527 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLD 586

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            L V L +  +   A ++ +EM    +  +  T+   I   CK   I E ++
Sbjct: 587 ELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 638



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 3/261 (1%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSM---ESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           ++N++L+     G  ++A + ++ +    S G +  + +Y+++I   CK  +I+ A+  +
Sbjct: 138 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 197

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM  K   PDV  ++TL  GL +  +V+ A  L DEMQ  G   +  T+   ID L KN
Sbjct: 198 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 257

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G +  A +L   + +  C  +   YN+LI GLC  G+L+ AL L   +     VPN VTY
Sbjct: 258 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 317

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
             +I GL    + +    + + MEE     N   +  LI G  +  +    + L  +M E
Sbjct: 318 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 377

Query: 443 INVMPDASIVSIVVDLLAKNE 463
               P+  +    +D L ++E
Sbjct: 378 KGCKPNVVVYGAFIDGLCRDE 398



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 3/240 (1%)

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPDVVIHNTLFVGLFEIHQ 289
           + CK TV S++ ++N   +  +   A   Y  +    SKG +P+++ +N +   L ++ Q
Sbjct: 130 LHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQ 189

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           ++RA   F EM       D +TY T ++GLCK   + EAV L   ++   C  +   +N 
Sbjct: 190 IDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNV 249

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LID L K+G L  A +L  ++     VPN VTY+ +I GLC  G++DKA  L   M  + 
Sbjct: 250 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 309

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            VPN +T+  +I G ++       + +L  M+E     +  I S ++  L K   S N++
Sbjct: 310 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 369


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 234/521 (44%), Gaps = 65/521 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F + GR+++    P  VTF  LI GL    +  E  A+  +++ FG  P+   Y
Sbjct: 260 GRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIY 319

Query: 62  TTLVNGLCRTSH------------------TIVALNL-----------------FEEMA- 85
             ++   CR  H                  T+V  NL                  +EM  
Sbjct: 320 NEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLL 379

Query: 86  ------------------NGNGEFGVVC-----------EPNTVTYTTIIDGLCKEGFVD 116
                              G G   +V            +PN    T  I  LCK G  +
Sbjct: 380 AGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHE 439

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A E+  Q+  K +  NV T  ++I G C   +  EA ++   M++ GV+ + +T+N+++
Sbjct: 440 EAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMI 499

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              CK  KMDEA +L D MI+ G +PD FT+N  L  +C  G+V     L   M+S G K
Sbjct: 500 QGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLK 559

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             + +Y  +I+GYCK K++  A    +E++  G++P+ VI+N L  G      +  A  +
Sbjct: 560 PDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGI 619

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            D M+ NG+     TY + +  +C  G + E   +F    +   E  +  Y  +I G CK
Sbjct: 620 LDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCK 679

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G+++ A+  F+ +    + PN +TY+ ++      G  ++A  LF +M    +VP+ ++
Sbjct: 680 IGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVS 739

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           ++ LI GF  ++   K++E   +M    +  D    +  VD
Sbjct: 740 YNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVD 780



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 208/429 (48%), Gaps = 7/429 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD  T+T++IK LC    I  A A+  +LR  G +P V TY  L++ LC++     A  
Sbjct: 208 APDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFR 267

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M  G         P+ VT+  +I GL +     +   +L +M+   I PN V Y  
Sbjct: 268 LKGRMVEGR------VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNE 321

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C     +EA +LF EM+ +G++  VVT+N+I   LCK G+M+ A ++LD M+  G
Sbjct: 322 MIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAG 381

Query: 200 VRPDAFTYNTLLDGFCL-TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           +      +N+++      TGR++    L   M +   K      +  I   CK+ + E A
Sbjct: 382 MMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEA 441

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             ++ ++L KG+  +V   N L  GL + + ++ A K+   M  +GV  D  TY   I G
Sbjct: 442 AEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQG 501

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK   + EA++L   +     + D+  +N  +   C  G++E  L L   +    L P+
Sbjct: 502 CCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPD 561

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +VTY  +I G C    M KA +   ++ +N + PN + ++ LI G+ R    S  I +L 
Sbjct: 562 IVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILD 621

Query: 439 KMKEINVMP 447
            MK   + P
Sbjct: 622 TMKYNGIQP 630



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 225/519 (43%), Gaps = 77/519 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  + +S   P  VT+  L+  LC   R+ EA  L  ++      P + T+
Sbjct: 225 GEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTF 284

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++GL R         + +EM      FG+   PN V Y  +I   C++G   +A +L
Sbjct: 285 GILISGLARGQQFGEVGAVLQEMQG----FGIT--PNEVIYNEMIGWHCRKGHCSEALKL 338

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK--------------------------- 154
             +M  K IK  VVTY  + +  C   +   A+                           
Sbjct: 339 FDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLR 398

Query: 155 ---------RLFIEMMDQGVQPNVVTFNVIMDELCKNGK--------------------- 184
                    RL  EM+ + ++PN       + ELCK+GK                     
Sbjct: 399 GTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVA 458

Query: 185 --------------MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
                         M EA+++L  M+  GV  D  TYN ++ G C   +++ A +L   M
Sbjct: 459 TSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDM 518

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G K  +F+++I ++ YC   ++E  L L  +M S+G+KPD+V + T+  G  +   +
Sbjct: 519 IKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDM 578

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
            +A +   E+ +NG+  +   Y   I G  +NG I +A+ +  T++    +     YNSL
Sbjct: 579 HKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSL 638

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           +  +C +G +E    +F       +   V+ Y+I+I G C  G++D+A   F +M    +
Sbjct: 639 MYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGI 698

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
            PN +T+  L+  + +     +  +L  +M  + ++PD+
Sbjct: 699 PPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDS 737



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 208/428 (48%), Gaps = 14/428 (3%)

Query: 35  AESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
           A   +  AA  F +L   G  P + T + LV  L       VA  +F EM +G       
Sbjct: 152 APGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGK-----T 206

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
             P+  TYT +I  LC+ G +D A  +L +++   I+P VVTY  ++   C +    EA 
Sbjct: 207 VAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAF 266

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           RL   M++  V+P++VTF +++  L +  +  E   +L  M   G+ P+   YN ++   
Sbjct: 267 RLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWH 326

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G  + A +LF  M S G K TV +Y+++    CK  E+E A  +  EML  G+    
Sbjct: 327 CRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGM---- 382

Query: 275 VIHNTLFVGLFEIH-----QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           ++H +LF  +   H     +++   +L  EM    +  +       I  LCK+G   EA 
Sbjct: 383 MVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAA 442

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           E++  +       ++   N+LI GLC+   ++ A ++ +++    +  + +TY+IMI G 
Sbjct: 443 EIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGC 502

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C   +MD+A  L  DM +    P++ TF++ +  +  + +  +++ LL +MK   + PD 
Sbjct: 503 CKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDI 562

Query: 450 SIVSIVVD 457
                ++D
Sbjct: 563 VTYGTIID 570



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 131/263 (49%), Gaps = 12/263 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L ++      PD VT+ ++I G C    + +A    T+L   G  P+   
Sbjct: 540 LGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVI 599

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y  L+ G  R  +   A+ + + M  NG        +P  VTY +++  +C  G V++ K
Sbjct: 600 YNALIGGYGRNGNISDAIGILDTMKYNG-------IQPTPVTYNSLMYWMCHAGLVEEVK 652

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  Q   K+I+  V+ YT +I+GFC     +EA   F EM  +G+ PN +T+  +M   
Sbjct: 653 AVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAY 712

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K+G  +EAS+L D M+  G+ PD+ +YNTL+ GFC    ++   E    M S   K   
Sbjct: 713 SKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDG 772

Query: 240 FSYSILING----YCKNKEIEGA 258
            SY+  ++G    +C+ + +  A
Sbjct: 773 CSYNAFVDGITTPWCQKEAVSNA 795



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 8/231 (3%)

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS----LYSEMLSKGIK 271
           L  R+     L V+  ++   H   +  +L+   C N    G+LS     + E+ ++G  
Sbjct: 114 LVSRLLRFNPLSVAAAAIADSHCTATADLLVRA-CLNSPAPGSLSRAADAFLELSARGAS 172

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG--VAADTWTYRTFIDGLCKNGYIVEAV 329
           P +   + L   L    Q++ A K+F EM R+G  VA D  TY   I  LC+ G I  A 
Sbjct: 173 PSIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVHTYTAMIKALCRAGEIDAAF 231

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
            +   LR    +  +  YN L+D LCKSGR+E A  L   +  G + P++VT+ I+I GL
Sbjct: 232 AMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGL 291

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
               Q  +   +  +M+   + PN + ++ +I    R    S+ ++L  +M
Sbjct: 292 ARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEM 342



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 1/142 (0%)

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG-VLVPNVVT 381
           G +  A + F  L        I+  + L++ L   G+L++A ++F  +  G  + P+V T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ MI  LC  G++D A  +  ++  + + P V+T+++L+    +     +   L  +M 
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 442 EINVMPDASIVSIVVDLLAKNE 463
           E  V P      I++  LA+ +
Sbjct: 274 EGRVRPSIVTFGILISGLARGQ 295


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 228/477 (47%), Gaps = 60/477 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPDVFTYTTLVNGLCRTSHTIVAL 78
           PD  ++  L+ GLC E+R  EA  L   +   G  C PDV +Y+T++NG  +        
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD----- 103

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
              ++M +          PN VTY +II  LCK   VDKA E+L  M    + P+ +TY 
Sbjct: 104 --LDKMLDQR------ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYN 155

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S++ GFC +    EA     +M   GV+P+VVT+N +MD LCKNG+  EA ++ D M + 
Sbjct: 156 SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 215

Query: 199 GVRPDAFTYNTLLDGFCLTG-----------------------------------RVNHA 223
           G++PD  TY TLL G+   G                                   +V  A
Sbjct: 216 GLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEA 275

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             +F  M   G      +Y  +I+  CK+  +E A+  + +M+ +G++PD +++N+L   
Sbjct: 276 MLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHS 335

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L    + E+A +LF EM   G+   T  + + ID  CK G ++E+ +LF  +  +  + D
Sbjct: 336 LCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           I             GR + A +LF +     LVPN  TY +M   +   G +++   LFL
Sbjct: 396 IITL----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 445

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            ME+N    +    + ++R  ++  E ++    L  + E +   +AS  S+ +DLL+
Sbjct: 446 SMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS 502



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 18/361 (4%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V     VL  ++KS   PD +T+ S++ G C+  +  EA     K+R  G EPDV TY +
Sbjct: 132 VDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNS 191

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++ LC+      A  +F+ M           +P+  TY T++ G   +G + +   LL 
Sbjct: 192 LMDYLCKNGRCTEARKIFDSMTKRG------LKPDITTYGTLLQGYATKGALVEMHGLLD 245

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M    I PN   ++ ++  +   +   EA  +F +M  QG+ PN VT+  ++D LCK+G
Sbjct: 246 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 305

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTVFSY 242
           ++++A    + MI  G+RPD+  YN+L+   C+  +   A+ELF+ M   G C  T+F  
Sbjct: 306 RVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFN 365

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           SI I+ +CK   +  +  L+  M+  G+KPD++           + + + A  LF     
Sbjct: 366 SI-IDSHCKEGRVIESGKLFDLMVRIGVKPDIIT----------LGRNDEAKDLFVAFSS 414

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           NG+  + WTYR   + +   G + E  +LF ++    C  D    N ++  L + G +  
Sbjct: 415 NGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITR 474

Query: 363 A 363
           A
Sbjct: 475 A 475



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 159/353 (45%), Gaps = 41/353 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+     V L ++      PD VT+ SL+  LC   R  EA  +F  +   G +PD+ TY
Sbjct: 165 GQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTY 224

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGV-VC------------------- 95
            TL+ G   T   +V ++   ++   NG       F + VC                   
Sbjct: 225 GTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283

Query: 96  ----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                PN VTY T+ID LCK G V+ A     QM D+ ++P+ + Y S+I   C    W 
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWE 343

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A+ LF+EM+D+G+  + + FN I+D  CK G++ E+ +L DLM++ GV+PD  T     
Sbjct: 344 KAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT----- 398

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
                 GR + AK+LFV+  S G     ++Y ++         +E    L+  M   G  
Sbjct: 399 -----LGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 453

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
            D  + N +   L +  ++ RA      +     + +  T   FID L    Y
Sbjct: 454 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 506



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 10/279 (3%)

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYS 243
           ++A  + D +++ G+ PD F+YN LL+G C   R   A EL   M   G  C   V SYS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +ING+ K  +++       +ML + I P+VV +N++   L +   V++A ++   M ++
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           GV  D  TY + + G C +G   EA+     +R    E D+  YNSL+D LCK+GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++F S+    L P++ TY  ++ G    G + +   L   M  N + PN   F +L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + +  +  + + +  KM++  + P+A     V+D+L K+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKS 304



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 9/242 (3%)

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIHNTLFVGLFEIHQVERAFKL 296
           VFSY+IL+NG C     + AL L   M   G    PDVV ++T+  G F+   +      
Sbjct: 51  VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL------ 104

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            D+M    ++ +  TY + I  LCK   + +A+E+  T+       D   YNS++ G C 
Sbjct: 105 -DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           SG+ + A+   + +    + P+VVTY+ ++  LC +G+  +AR +F  M +  + P++ T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
           +  L++G+       ++  LL  M    + P+  + SI+V   AK E    ++  F+   
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283

Query: 477 QQ 478
           QQ
Sbjct: 284 QQ 285


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 227/461 (49%), Gaps = 6/461 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M R    F     + +    P   T  SL+      +R   A  L+ ++     +  V+T
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  ++N LC+      A +    M       GV  +PN VTY TI+ G C  G V+ A  
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETS----GV--KPNIVTYNTIVHGYCSSGRVEAADA 277

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  MK + I+P+  TY S+I G C      EA ++F EM+ +G++P+ V +N ++D  C
Sbjct: 278 ILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFC 337

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G +D AS   D M++ G+ P   TYN+L+    +  R + A+ +   ++  G      
Sbjct: 338 NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAI 397

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILINGYC+    + A  L+ EML+ GIKP    + +L   L + ++++ A  LF ++
Sbjct: 398 TYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKI 457

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  D   +   IDG C N  +  A EL   +  +K   D   +N+++ G C+ G++
Sbjct: 458 TSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKV 517

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A ELF  +    + P+ ++++ +I G    G +  A  +  +M +    P V+T++ L
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNAL 577

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++G  +  E     ELL +M    + PD +    +++ +AK
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 217/430 (50%), Gaps = 6/430 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R    +V+   + +        TF  +I  LC E ++ +A      +   G +P++ T
Sbjct: 199 LNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVT 258

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+V+G C +     A  +   M           EP++ TY ++I G+CK+G +++A +
Sbjct: 259 YNTIVHGYCSSGRVEAADAILTTMKRQK------IEPDSFTYGSLISGMCKQGRLEEASK 312

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  K ++P+ V Y ++I GFC   + + A     EM+ +G+ P + T+N ++  L 
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
              + DEA  ++  + + G+ PDA TYN L++G+C       A  L   M + G K T  
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L++   K   ++ A  L+ ++ S+G+ PD ++ N L  G      V+ AF+L  +M
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            R  V  D  T+ T + G C+ G + EA ELF  ++    + D  ++N+LI G  + G +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +   +      P V+TY+ ++ GLC + + D A +L  +M    + P+  T+  L
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612

Query: 421 IRGFIRINEP 430
           I G  ++N P
Sbjct: 613 IEGIAKVNIP 622



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 191/404 (47%), Gaps = 38/404 (9%)

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +FE +A      G     +++ +  +I   C     D+A E    MK+K + P + T  S
Sbjct: 135 IFEFLAASRDRLGF---KSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNS 191

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++  F        A  L+ EM    ++ +V TFN++++ LCK GK+ +A   +  M   G
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSG 251

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V+P+  TYNT++ G+C +GRV  A  +  +M+    +   F+Y  LI+G CK   +E A 
Sbjct: 252 VKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEAS 311

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVG-----------------------------------L 284
            ++ EM+ KG++P  VI+NTL  G                                   L
Sbjct: 312 KIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHAL 371

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
           F   + + A  +  E+Q  G++ D  TY   I+G C+     +A  L   +     +   
Sbjct: 372 FMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTK 431

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           + Y SL+  L K  R++ A +LF+ +    ++P+ + ++ +I G C++  +  A +L  D
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKD 491

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           M+   V P+ +TF+ +++G  R  +  +  EL  +MK   + PD
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 38/308 (12%)

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           + F+ ++   C   + DEA      M + GV P   T N+LL  F    R   A  L+  
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M  +  K +V++++I+IN  CK  +++ A      M + G+KP++V              
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIV-------------- 257

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
                                TY T + G C +G +  A  +  T++  K E D   Y S
Sbjct: 258 ---------------------TYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI G+CK GRLE A ++F  +    L P+ V Y+ +I G CN G +D A     +M +  
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + P + T++ LI          +   ++ +++E  + PDA   +I+++   +     N+ 
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR---CANAK 413

Query: 470 PSFTVHEQ 477
            +F +H++
Sbjct: 414 KAFLLHDE 421



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 41/216 (18%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F++   +L S   P   T+TSL+  L  ++R+ EA  LF K+   G  PD   +  L++
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALID 474

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G C  S+   A  L ++M        +   P+ VT+ TI+ G C+EG V++A+EL  +MK
Sbjct: 475 GHCSNSNVKGAFELLKDMDR------MKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528

Query: 127 DKNIKPN-----------------------------------VVTYTSVIRGFCYAKDWN 151
            + IKP+                                   V+TY ++++G C  ++ +
Sbjct: 529 RRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGD 588

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
            A+ L  EM+ +G+ P+  T+  +++ + K    DE
Sbjct: 589 LAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 6/118 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +   + +    PD ++F +LI G      I +A  +  ++   G  P V TY
Sbjct: 515 GKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTY 574

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
             LV GLC+     +A  L +EM +          P+  TY T+I+G+ K    D+ K
Sbjct: 575 NALVQGLCKNQEGDLAEELLKEMVSKG------MTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 217/436 (49%), Gaps = 6/436 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T   LI      ++  +A  LF +   F C P V  +T L++ L  +     A  +++++
Sbjct: 32  TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKL 91

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                     C+ +   Y  +I    + G +D A E+  +MK K  +P+  TY  ++   
Sbjct: 92  VQKG------CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL 145

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
             A    EA+  F  M+++G+ PN+ T+N++MD   K G++D A  L   M + G +P  
Sbjct: 146 GKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSV 205

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TYN LLD  C  GRV  A++LF  M   GC    ++YS L+NG  K+  +E A  ++ E
Sbjct: 206 VTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFRE 265

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+ +G+  D+V +N+L   L +   ++R +KL  EM R G   D +++ T +D L K   
Sbjct: 266 MVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
              A E+F  +    C+ D+ +YN LID   + G    A ++   +     +P   TY+ 
Sbjct: 326 PDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNS 385

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  L  DGQ+D+A  +  +ME     P+V+T++ L+    +  E  +   L  +MK+  
Sbjct: 386 LIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG 445

Query: 445 VMPDASIVSIVVDLLA 460
           V PD    ++ +D LA
Sbjct: 446 VEPDTLSYAVRIDGLA 461



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 213/446 (47%), Gaps = 9/446 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G      +V  ++++     D   +  LI+      ++  A  +F ++++ G EPD +TY
Sbjct: 79  GEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTY 138

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LVN L +      A + F+ M     E G+   PN  TY  ++D   K G +D A  L
Sbjct: 139 GFLVNALGKAGRVQEARSFFDAML----ERGLT--PNIPTYNLLMDAFRKVGQLDMALGL 192

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK +  +P+VVTY  ++   C A     A++LF +M   G  P+  T++ +++ L K
Sbjct: 193 FAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGK 252

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+++EA ++   M+  GV  D   YN+LL      G ++   +L   M   G     FS
Sbjct: 253 SGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFS 312

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ +++   K  + + A  +++ M+  G KPD++ +N L           +A ++ +EM 
Sbjct: 313 FNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV 372

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   +T TY + I  L  +G + EA  +   +    C  D+  YN L+D L K G  +
Sbjct: 373 EAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ 432

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF+ +    + P+ ++Y++ I GL  D ++D+A  LF DM+      +   + +LI
Sbjct: 433 RAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492

Query: 422 RGFIRINEPSKVIELLHKMKEINVMP 447
           R   R  +     +L H   E   MP
Sbjct: 493 RAAHRAGDTELEAQLKH---ESQFMP 515



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 174/341 (51%), Gaps = 6/341 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +   + +  F P  VT+  L+  LC+  R+  A  LF K+   GC PD +T
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TLVNGL ++     A  +F EM +     GV    + V Y +++  L K G +D+  +
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDR----GVAV--DLVNYNSLLATLAKAGNMDRVWK 296

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+ +M  K   P+  ++ +++     A   + A+ +F  M++ G +P+++++N+++D   
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G   +A ++L+ M++ G  P+  TYN+L+      G+V+ A  +   ME+ GC+  V 
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVV 416

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L++   K  E + A  L+ +M  KG++PD + +     GL    +++ A  LF +M
Sbjct: 417 TYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
           +  G   D   YR  I    + G      +L H  + +  E
Sbjct: 477 KAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQFMPVE 517



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 175/355 (49%), Gaps = 4/355 (1%)

Query: 109 LCKEGFVDKAKELLLQM--KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           L   G +D  + LL +M  + + ++PN  T   +I  +       +A  LF +       
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACS 62

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P V  F  ++D L  +G+ + A  +   ++Q G + D F YN L+  F  +G+++ A E+
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           F  M+  G +   ++Y  L+N   K   ++ A S +  ML +G+ P++  +N L     +
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
           + Q++ A  LF EM+R G      TY   +D LC  G +  A +LFH +    C  D   
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y++L++GL KSGR+E A ++FR +    +  ++V Y+ ++  L   G MD+   L  +M 
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMS 302

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                P+  +F+ ++    + N+P    E+  +M E    PD    +I++D  A+
Sbjct: 303 RKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYAR 357



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 123/287 (42%), Gaps = 41/287 (14%)

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH---AKELFVSMESMGC 235
           L   G +D    LL  M+  G RP     NTL+      GR N    A +LF   ES  C
Sbjct: 5   LASWGILDPLETLLKEMVAEG-RP--LRPNTLVKLITAYGRGNKSGDAFDLFNQAESFAC 61

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
             TV +++ LI+    + E E A  +Y +++ KG +                        
Sbjct: 62  SPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQ------------------------ 97

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
                       D + Y   I    ++G +  A+E+F  ++I   E D   Y  L++ L 
Sbjct: 98  -----------LDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALG 146

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K+GR++ A   F ++    L PN+ TY++++      GQ+D A  LF +M+     P+V+
Sbjct: 147 KAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVV 206

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T+++L+             +L HKM      PD+   S +V+ L K+
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKS 253


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 240/520 (46%), Gaps = 68/520 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +   ++ S  +P+  TF  LI  LC    + +A  LF K+   GCEP+ +++
Sbjct: 35  GRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSF 94

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV G CR   T   L L  EM        +   PN V Y T+I   CKEG  D A++L
Sbjct: 95  GILVRGYCRAGFTSKGLELLGEMRR------LGFSPNKVVYNTLISSFCKEGKTDDAEKL 148

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV----QPNVVTFNVIMD 177
           + +M+   + P+VVT+ + I   C +    EA R+F +M    V    QPN++T+N+++ 
Sbjct: 149 VDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLG 208

Query: 178 ELCKNGKMDEASRL-----------------------------------LDLMIQHGVRP 202
             CK G ++EA  L                                   L  M+  G+ P
Sbjct: 209 GFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEP 268

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           + ++YN ++DG C  G +  A+ L   M S G      +Y+ L++GYC   ++  A ++ 
Sbjct: 269 NVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVL 328

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM+  G  P+    N L   L++  ++  A +L  +M   G   DT T    IDGLC N
Sbjct: 329 REMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNN 388

Query: 323 GYIVEAVELFHTLRI-----------------------LKCEFDIRAYNSLIDGLCKSGR 359
           G + +A+E+ + +                          KC  D+ +Y+++I GLCK+GR
Sbjct: 389 GKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGR 448

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A + F  +    L P+   Y + I   C +G++  A  +  DME+      + T++ 
Sbjct: 449 VGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNS 508

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           LI G    N+  ++  L+ +M+E  V PD SI + V+  L
Sbjct: 509 LIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSL 548



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 205/445 (46%), Gaps = 56/445 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR---VFGC-EPD 57
           G+      ++  + K   +PD VTF + I  LC+  +++EA+ +F  ++   V G  +P+
Sbjct: 140 GKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPN 199

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANG----NGE------FGVV------------- 94
           + TY  ++ G C+      A  LFE+M       N E       G+V             
Sbjct: 200 IITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLK 259

Query: 95  ------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                  EPN  +Y  ++DGLCK G +  A+ L+  M    + P+ VTYT+++ G+C+  
Sbjct: 260 EMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTG 319

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
             +EA  +  EMM  G  PN  T N+++  L K G++ EA  LL  M + G   D  T N
Sbjct: 320 KVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCN 379

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMG-----------------------CKHTVFSYSIL 245
            ++DG C  G+++ A E+   M + G                       C   + SYS +
Sbjct: 380 IVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTI 439

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I+G CK   +  A   + EM+ K ++PD  I++       +  ++  AF++  +M++ G 
Sbjct: 440 ISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGC 499

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
                TY + I GL     I E   L   +R      D+  YN+++  LC+ GR++ A  
Sbjct: 500 NKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPS 559

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLC 390
           +   +    + PN+ ++SI+I   C
Sbjct: 560 VLDEMLQKGISPNISSFSILIKAFC 584



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 199/407 (48%), Gaps = 14/407 (3%)

Query: 41  EAAALFTKLRVFGCE--PDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEP 97
           +A + F  LR    E  P ++ Y  L+    +         L ++M A+G         P
Sbjct: 2   KAISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASG-------VSP 54

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            T T+  +I  LC  G +D A+EL  +M +K  +PN  ++  ++RG+C A   ++   L 
Sbjct: 55  ETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELL 114

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM   G  PN V +N ++   CK GK D+A +L+D M + G+ PD  T+N  +   C +
Sbjct: 115 GEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSS 174

Query: 218 GRVNHAKELFVSM---ESMGCKH-TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           G+V  A  +F  M   E +G     + +Y++++ G+CK   +E A +L+ +M       +
Sbjct: 175 GKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMN 234

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +N   +GL  I ++  A  +  EM   G+  + ++Y   +DGLCKNG + +A  L  
Sbjct: 235 RESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMR 294

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +       D   Y +L+ G C +G++  A  + R +      PN  T +I++  L  +G
Sbjct: 295 LMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEG 354

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           ++ +A +L   M E   V + +T +++I G     +  K IE+++ M
Sbjct: 355 RISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGM 401



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 205/471 (43%), Gaps = 40/471 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++    +VL  ++     P+  ++  ++ GLC    + +A  L   +   G  PD  T
Sbjct: 248 IGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVT 307

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTTL++G C T     A N+  EM          C PN  T   ++  L KEG + +A+E
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDG------CSPNNYTCNILLYSLWKEGRISEAEE 361

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---------------- 164
           LL +M +K    + VT   VI G C     ++A  +   M   G                
Sbjct: 362 LLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVD 421

Query: 165 -------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
                    P++++++ I+  LCK G++ EA +    M+   ++PD+  Y+  +  FC  
Sbjct: 422 DSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKE 481

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G+++ A  +   ME  GC  T+ +Y+ LI G     +I     L  EM  +G+ PDV I+
Sbjct: 482 GKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIY 541

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N +   L E  +V+ A  + DEM + G++ +  ++   I   CK        E+F  + +
Sbjct: 542 NNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE-IAL 600

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELF-----RSLPCGVLVPNVVTYSIMIGGLCND 392
             C      Y+   + L   G +  A ELF     RS   G  +     Y  +I  LC D
Sbjct: 601 NVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFL-----YKDLIDHLCKD 655

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            ++D A  +   + +     +  +F  +I G  +     +  EL  KM E+
Sbjct: 656 EKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEM 706



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 186/370 (50%), Gaps = 4/370 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+   Y  ++    KEG VD    L   M    + P   T+  +I   C +   ++A+ L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F +M ++G +PN  +F +++   C+ G   +   LL  M + G  P+   YNTL+  FC 
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI----KP 272
            G+ + A++L   M   G    V +++  I+  C + ++  A  ++ +M    +    +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +++ +N +  G  +   +E A  LF++M+ +    +  +Y  ++ GL + G ++EA  + 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +  +  E ++ +YN ++DGLCK+G L  A  L R +    ++P+ VTY+ ++ G C+ 
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G++ +A ++  +M  +   PN  T ++L+    +    S+  ELL KM E   + D    
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 453 SIVVDLLAKN 462
           +IV+D L  N
Sbjct: 379 NIVIDGLCNN 388



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 134/267 (50%), Gaps = 4/267 (1%)

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P  + YN LL      GRV+    L   M + G     +++++LI   C +  ++ A  L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +M  KG +P+      L  G        +  +L  EM+R G + +   Y T I   CK
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC----GVLVP 377
            G   +A +L   +R      D+  +N+ I  LC SG++  A  +FR +      G+  P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           N++TY++M+GG C +G +++AR LF  M+ +  + N  ++++ + G +RI +  +   +L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEI 464
            +M ++ + P+    +IV+D L KN +
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGV 285


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 230/456 (50%), Gaps = 7/456 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +     L  ++   +TPD +  T LIKG      I +A+ +   L     EPDVF Y
Sbjct: 92  GKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH-TEPDVFAY 150

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C+ +    A  +   M    G       P+ VTY  +I  LC    +  A  +
Sbjct: 151 NAVISGFCKVNQIEAATQVLNRM-KARGFL-----PDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L Q+   N  P V+TYT +I         NEA +L  EM+ +G+ P++ T+N I+  +CK
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++ A+ L+  +   G  PD  +YN LL  F   G+ +  ++L   M S GC+    +
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILI+  C+   I+ A+S+   M+ K + PD   ++ L   L +  +++ A  + D M 
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   D   Y T +  LCKNG   +A+E+F+ LR + C  ++ +YN++I  L   G   
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL +  ++    + P+ +TY+ +I  LC DG +++A  L  DME++   P VI++++++
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            G  ++      I +  +M E    P+ +   ++++
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 540



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 216/437 (49%), Gaps = 6/437 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           IL+S   PD   + ++I G C  ++I  A  +  +++  G  PD+ TY  ++  LC    
Sbjct: 138 ILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 197

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
             +AL + +++   N      C P  +TYT +I+    EG +++A +LL +M  + + P+
Sbjct: 198 LGLALTVLDQLLLDN------CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPD 251

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           + TY ++IRG C       A  L   +  +G +P+V+++N+++      GK DE  +L+ 
Sbjct: 252 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVA 311

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M   G  P+  TY+ L+   C  GR++ A  +   M         +SY  LI+  CK  
Sbjct: 312 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 371

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++ A+ +   M+S G  PD+V +NT+   L +     +A ++F++++  G   +  +Y 
Sbjct: 372 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 431

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T I  L   G    A+ +   +     + D   YNSLI  LC+ G +E A+ L   +   
Sbjct: 432 TMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 491

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P V++Y+I++ GLC   ++D A  +F +M E    PN  T+ +LI G       ++ 
Sbjct: 492 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA 551

Query: 434 IELLHKMKEINVMPDAS 450
           +EL + +   +V+   S
Sbjct: 552 MELANSLFSRDVISQDS 568



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 190/396 (47%), Gaps = 41/396 (10%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL R+    F PD VT+  +I  LC   ++  A  +  +L +  C P V TYT L+    
Sbjct: 169 VLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATI 228

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  A+ L EEM       G++  P+  TY  II G+CKEG V++A EL+  +  K 
Sbjct: 229 VEGGINEAMKLLEEML----ARGLL--PDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            +P+V++Y  ++R F     W+E ++L  EM  +G +PN VT+++++  LC+ G++DEA 
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 342

Query: 190 RLL-----------------------------------DLMIQHGVRPDAFTYNTLLDGF 214
            +L                                   D MI +G  PD   YNT+L   
Sbjct: 343 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 402

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G  N A E+F  +  MGC   V SY+ +I+      +   AL +   M+SKGI PD 
Sbjct: 403 CKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDE 462

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +N+L   L     VE A  L D+M+++G      +Y   + GLCK   I +A+ +F  
Sbjct: 463 ITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAE 522

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           +    C  +   Y  LI+G+  +G    A+EL  SL
Sbjct: 523 MIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 181/366 (49%), Gaps = 1/366 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ +  T +I G      ++KA  ++ ++ + + +P+V  Y +VI GFC       A ++
Sbjct: 111 PDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNQIEAATQV 169

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M  +G  P++VT+N+++  LC   K+  A  +LD ++     P   TY  L++   +
Sbjct: 170 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIV 229

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G +N A +L   M + G    +++Y+ +I G CK   +E A  L + + SKG +PDV+ 
Sbjct: 230 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVIS 289

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L        + +   KL  EM   G   +  TY   I  LC+ G I EA+ +   + 
Sbjct: 290 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 349

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +   D  +Y+ LI  LCK GRL++A+ +   +     +P++V Y+ ++  LC +G  +
Sbjct: 350 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 409

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A ++F  +      PNV +++ +I       + S+ + ++  M    + PD    + ++
Sbjct: 410 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLI 469

Query: 457 DLLAKN 462
             L ++
Sbjct: 470 SCLCRD 475



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 153/318 (48%), Gaps = 1/318 (0%)

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A  +NE+      ++++G  P+V+    ++        +++ASR+++++  H   PD 
Sbjct: 89  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH-TEPDV 147

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
           F YN ++ GFC   ++  A ++   M++ G    + +Y+I+I   C  +++  AL++  +
Sbjct: 148 FAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQ 207

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           +L     P V+ +  L         +  A KL +EM   G+  D +TY   I G+CK G 
Sbjct: 208 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 267

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A EL  +L    CE D+ +YN L+      G+ +   +L   +      PN VTYSI
Sbjct: 268 VERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 327

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  LC  G++D+A  +   M E  + P+  ++D LI    +       I ++  M    
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 387

Query: 445 VMPDASIVSIVVDLLAKN 462
            +PD    + ++  L KN
Sbjct: 388 CLPDIVNYNTILAALCKN 405



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 115/231 (49%), Gaps = 6/231 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL  +++   TPD  ++  LI  LC E R+  A  +   +   GC PD+  Y
Sbjct: 336 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 395

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++  LC+  +   AL +F ++       G+ C PN  +Y T+I  L   G   +A  +
Sbjct: 396 NTILAALCKNGNANQALEIFNKLR------GMGCPPNVSSYNTMISALWSCGDRSRALGM 449

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M  K I P+ +TY S+I   C      EA  L  +M   G +P V+++N+++  LCK
Sbjct: 450 VPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 509

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
             ++D+A  +   MI+ G RP+  TY  L++G    G    A EL  S+ S
Sbjct: 510 VRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 560



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 6/199 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     ++  ++ +   PD V + +++  LC      +A  +F KLR  GC P+V +Y
Sbjct: 371 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 430

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++ L        AL +   M +     G+  +P+ +TY ++I  LC++G V++A  L
Sbjct: 431 NTMISALWSCGDRSRALGMVPAMISK----GI--DPDEITYNSLISCLCRDGLVEEAIGL 484

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+    +P V++Y  V+ G C  +  ++A  +F EM+++G +PN  T+ ++++ +  
Sbjct: 485 LDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGF 544

Query: 182 NGKMDEASRLLDLMIQHGV 200
            G   EA  L + +    V
Sbjct: 545 AGWRTEAMELANSLFSRDV 563


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 184/316 (58%), Gaps = 10/316 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTFT+L+ GLC E R+++A AL  ++   G +P    Y T++NGLC+   T  ALNL
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M   +       + + V Y  IID LCK+G    A+ L  +M DK I P+V+TY+ +
Sbjct: 64  LSKMEETH------IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I  FC +  W +A++L  +M+++ + P+VVTF+ +++ L K GK+ EA  +   M++ G+
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P   TYN+++DGFC   R+N AK +  SM S  C   V ++S LINGYCK K ++  + 
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ EM  +GI  + V + TL  G  ++  ++ A  L + M  +GVA +  T+++ +  LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 321 KNGYIVEAVELFHTLR 336
               + +A  +   L+
Sbjct: 298 SKKELRKAFAILEDLQ 313



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 163/314 (51%), Gaps = 4/314 (1%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C P+ VT+TT+++GLC EG V +A  L+ +M ++  +P    Y ++I G C   D   A 
Sbjct: 6   CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  +M +  ++ +VV +N I+D LCK+G    A  L   M   G+ PD  TY+ ++D F
Sbjct: 62  NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C +GR   A++L   M        V ++S LIN   K  ++  A  +Y +ML +GI P  
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +N++  G  +  ++  A ++ D M     + D  T+ T I+G CK   +   +E+F  
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +       +   Y +LI G C+ G L+ A +L   +    + PN +T+  M+  LC+  +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301

Query: 395 MDKARDLFLDMEEN 408
           + KA  +  D++++
Sbjct: 302 LRKAFAILEDLQKS 315



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 163/318 (51%), Gaps = 4/318 (1%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M +   +P+VVT+T+++ G C      +A  L   M+++G QP    +  I++ LCK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
            + A  LL  M +  ++     YN ++D  C  G   HA+ LF  M   G    V +YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+ +C++     A  L  +M+ + I PDVV  + L   L +  +V  A +++ +M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +   T TY + IDG CK   + +A  +  ++    C  D+  +++LI+G CK+ R++  +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E+F  +    +V N VTY+ +I G C  G +D A+DL   M  + V PN ITF  ++   
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 425 IRINEPSKVIELLHKMKE 442
               E  K   +L  +++
Sbjct: 297 CSKKELRKAFAILEDLQK 314



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 155/306 (50%), Gaps = 5/306 (1%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M++ G +P+VVTF  +M+ LC  G++ +A  L+D M++ G +P    Y T+++G C  G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
              A  L   ME    K  V  Y+ +I+  CK+     A +L++EM  KGI PDV+ ++ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +        +   A +L  +M    +  D  T+   I+ L K G + EA E++  +    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
                  YNS+IDG CK  RL  A  +  S+      P+VVT+S +I G C   ++D   
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD-ASIVSIVVDL 458
           ++F +M    +V N +T+  LI GF ++ +     +LL+ M    V P+  +  S++  L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 459 LAKNEI 464
            +K E+
Sbjct: 297 CSKKEL 302



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 132/265 (49%), Gaps = 6/265 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG       +L ++ ++      V + ++I  LC +   + A  LFT++   G  PDV T
Sbjct: 54  MGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++  CR+     A  L  +M            P+ VT++ +I+ L KEG V +A+E
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQ------INPDVVTFSALINALVKEGKVSEAEE 167

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M  + I P  +TY S+I GFC     N+AKR+   M  +   P+VVTF+ +++  C
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++D    +   M + G+  +  TY TL+ GFC  G ++ A++L   M S G      
Sbjct: 228 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYI 287

Query: 241 SYSILINGYCKNKEIEGALSLYSEM 265
           ++  ++   C  KE+  A ++  ++
Sbjct: 288 TFQSMLASLCSKKELRKAFAILEDL 312



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 4/243 (1%)

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   GC+  V +++ L+NG C    +  AL+L   M+ +G +P    + T+  GL ++  
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            E A  L  +M+   + A    Y   ID LCK+G+ + A  LF  +       D+  Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +ID  C+SGR   A +L R +    + P+VVT+S +I  L  +G++ +A +++ DM    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + P  IT++ +I GF + +  +    +L  M   +  PD    S +++   K +   N +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 470 PSF 472
             F
Sbjct: 237 EIF 239



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+VVT++ ++ GLC +G++ +A  L   M E    P    +  +I G  ++ +    + L
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           L KM+E ++     I + ++D L K+   +++   FT
Sbjct: 64  LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFT 100


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 227/461 (49%), Gaps = 6/461 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M R    F     + +    P   T  SL+      +R   A  L+ ++     +  V+T
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  ++N LC+      A +    M       GV  +PN VTY TI+ G C  G V+ A  
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETS----GV--KPNIVTYNTIVHGYCSSGRVEAADA 277

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L  MK + I+P+  TY S+I G C      EA ++F EM+ +G++P+ V +N ++D  C
Sbjct: 278 ILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFC 337

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G +D AS   D M++ G+ P   TYN+L+    +  R + A+ +   ++  G      
Sbjct: 338 NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAI 397

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILINGYC+    + A  L+ EML+ GIKP    + +L   L + ++++ A  LF ++
Sbjct: 398 TYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKI 457

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  D   +   IDG C N  +  A EL   +  +K   D   +N+++ G C+ G++
Sbjct: 458 TSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKV 517

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A ELF  +    + P+ ++++ +I G    G +  A  +  +M +    P V+T++ L
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNAL 577

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++G  +  E     ELL +M    + PD +    +++ +AK
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 218/430 (50%), Gaps = 6/430 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R    +V+   + +        TF  +I  LC E ++ +A      +   G +P++ T
Sbjct: 199 LNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVT 258

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+V+G C +     A  +   M           EP++ TY ++I G+CK+G +++A +
Sbjct: 259 YNTIVHGYCSSGRVEAADAILTTMKRQK------IEPDSFTYGSLISGMCKQGRLEEASK 312

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M  K ++P+ V Y ++I GFC   + + A     EM+ +G+ P + T+N ++  L 
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
              + DEA  ++  + + G+ PDA TYN L++G+C       A  L   M + G K T  
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ L++   K   ++ A  L+ ++ S+G+ PDV++ N L  G      V+ AF+L  +M
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            R  V  D  T+ T + G C+ G + EA ELF  ++    + D  ++N+LI G  + G +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +   +      P V+TY+ ++ GLC + + D A +L  +M    + P+  T+  L
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612

Query: 421 IRGFIRINEP 430
           I G  ++N P
Sbjct: 613 IEGIAKVNIP 622



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 192/404 (47%), Gaps = 38/404 (9%)

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +FE +A      G     +++ +  +I   C     D+A E    MK+K + P + T  S
Sbjct: 135 IFEFLAASRDRLGF---KSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNS 191

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++  F        A  L+ EM    ++ +V TFN++++ LCK GK+ +A   +  M   G
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSG 251

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V+P+  TYNT++ G+C +GRV  A  +  +M+    +   F+Y  LI+G CK   +E A 
Sbjct: 252 VKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEAS 311

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVG-----------------------------------L 284
            ++ EM+ KG++P  VI+NTL  G                                   L
Sbjct: 312 KIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHAL 371

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
           F   + + A  +  E+Q  G++ D  TY   I+G C+     +A  L   +     +   
Sbjct: 372 FMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTK 431

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           + Y SL+  L K  R++ A +LF+ +    ++P+V+ ++ +I G C++  +  A +L  D
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKD 491

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           M+   V P+ +TF+ +++G  R  +  +  EL  +MK   + PD
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 38/308 (12%)

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           + F+ ++   C   + DEA      M + GV P   T N+LL  F    R   A  L+  
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M  +  K +V++++I+IN  CK  +++ A      M + G+KP++V              
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIV-------------- 257

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
                                TY T + G C +G +  A  +  T++  K E D   Y S
Sbjct: 258 ---------------------TYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI G+CK GRLE A ++F  +    L P+ V Y+ +I G CN G +D A     +M +  
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           + P + T++ LI          +   ++ +++E  + PDA   +I+++   +     N+ 
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR---CANAK 413

Query: 470 PSFTVHEQ 477
            +F +H++
Sbjct: 414 KAFLLHDE 421



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 41/216 (18%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F++   +L S   P   T+TSL+  L  ++R+ EA  LF K+   G  PDV  +  L++
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID 474

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G C  S+   A  L ++M        +   P+ VT+ TI+ G C+EG V++A+EL  +MK
Sbjct: 475 GHCSNSNVKGAFELLKDMDR------MKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528

Query: 127 DKNIKPN-----------------------------------VVTYTSVIRGFCYAKDWN 151
            + IKP+                                   V+TY ++++G C  ++ +
Sbjct: 529 RRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGD 588

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
            A+ L  EM+ +G+ P+  T+  +++ + K    DE
Sbjct: 589 LAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 6/118 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +   + +    PD ++F +LI G      I +A  +  ++   G  P V TY
Sbjct: 515 GKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTY 574

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
             LV GLC+     +A  L +EM +          P+  TY T+I+G+ K    D+ K
Sbjct: 575 NALVQGLCKNQEGDLAEELLKEMVSKG------MTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 214/421 (50%), Gaps = 7/421 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P A TF ++  G     R+ +   ++  +   G       Y  L++ LC+  +   A  L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M           +   + Y+TII+ LCK   V++A+EL+ +M  +   P+ +TY  +
Sbjct: 68  LHTMRLKR------FKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPI 120

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +   C  K  ++A     EM  +G++P+   +N ++  LC+  K++EA  L + M++  +
Sbjct: 121 VERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TYNTL++G C   R+  A ELF  M   G   T  SY+ LI+G+CK K++  A  
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ +M+     P+VV + TL  GL +  +V+ A ++ D M + GV  +  TY   IDG C
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFC 300

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + EA +L   +        +  YN L++ LC++ +LE A +LFR +      P VV
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 360

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++  LC+  Q+D A  L+ +M      P+ IT+D L  G  R  +  +  EL+ KM
Sbjct: 361 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420

Query: 441 K 441
           K
Sbjct: 421 K 421



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 118/319 (36%), Positives = 176/319 (55%), Gaps = 6/319 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA+T+  +++ LC   RI +A A   ++   G +PD F Y  +++GLC+      A  L
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE+M            PN VTY T+I+GLCK   ++ A EL  +M  K   P  V+Y ++
Sbjct: 172 FEKMVKQR------INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 225

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC  KD   AK +F +M+     PNVVT+  ++D L K+GK+  A+ +LD M++ GV
Sbjct: 226 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 285

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TY+ L+DGFC   RV+ A +L   M + G   TV +Y+IL+N  C+  ++E A  
Sbjct: 286 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 345

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+  M  +   P VV +NTL   L    Q++ A +L+ EM   G   D  TY T   GL 
Sbjct: 346 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 405

Query: 321 KNGYIVEAVELFHTLRILK 339
           + G + EA EL   +++ K
Sbjct: 406 RAGKVHEAQELMEKMKLTK 424



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 208/413 (50%), Gaps = 17/413 (4%)

Query: 4   VSHGFVVLGRI----------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 53
           V+ GF   GR+          +++ +T  A  +  LI  LC      EA  L   +R+  
Sbjct: 16  VADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKR 75

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
            +     Y+T++N LC+ +    A  L E+MA           P+ +TY  I++ LCK  
Sbjct: 76  FKRKAIAYSTIINWLCKLNRVEEARELIEKMAR-------YAPPDALTYGPIVERLCKTK 128

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            +D A   + +M  + IKP+   Y  V+ G C  +   EA+ LF +M+ Q + PNVVT+N
Sbjct: 129 RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYN 188

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            +++ LCK  +++ A  L   M   G  P   +YNTL+DGFC    +  AK++F  M   
Sbjct: 189 TLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
            C   V +Y+ LI+G  K+ +++ A  +   M+ KG+ P+V  ++ L  G  ++ +V+ A
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 308

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            KL ++M   G+A    TY   ++ LC+   + +A +LF  +   +C   +  YN+L+  
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 368

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           LC   +L+ A  L+  +      P+ +TY  +  GL   G++ +A++L   M+
Sbjct: 369 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 201/424 (47%), Gaps = 16/424 (3%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P   T+ T+ +G  +       L   +E+  G  E G     +   Y  +I  LCK G  
Sbjct: 8   PGAATFNTVADGFAKAGR----LEQVKEVYQGMVEAGYTLRASG--YGILISCLCKVGNF 61

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A +LL  M+ K  K   + Y+++I   C      EA+ L IE M +   P+ +T+  I
Sbjct: 62  DEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEAREL-IEKMARYAPPDALTYGPI 120

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++ LCK  ++D+A   ++ M   G++PDAF YN +L G C   +V  A+ LF  M     
Sbjct: 121 VERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +Y+ LING CK   IE A  L+ EM  KG  P  V +NTL  G  +   +  A  
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +FD+M R+    +  TY T IDGL K+G +  A E+   +       ++  Y+ LIDG C
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFC 300

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K  R++ A +L   +    + P VVTY+I++  LC   +++ A  LF  M +    P V+
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 360

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
           T++ L+R      +      L  +M      PDA    I  D LA             VH
Sbjct: 361 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDA----ITYDTLAWGLTRAGK-----VH 411

Query: 476 EQQE 479
           E QE
Sbjct: 412 EAQE 415



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 143/263 (54%), Gaps = 6/263 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V    ++  +++K    P+ VT+ +LI GLC   RI  A  LF ++   G  P   +Y 
Sbjct: 164 KVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYN 223

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++G C+    + A ++F++M   N      C PN VTYTT+IDGL K G V  A E+L
Sbjct: 224 TLIDGFCKKKDLVAAKDVFDKMVRSN------CVPNVVTYTTLIDGLSKSGKVQAAAEVL 277

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  K + PNV TY+ +I GFC  +  +EA +L  +M+ QG+ P VVT+N++++ LC+ 
Sbjct: 278 DGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRA 337

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K+++A +L   M Q    P   TYNTLL   C   +++ A  L+  M + GC     +Y
Sbjct: 338 DKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITY 397

Query: 243 SILINGYCKNKEIEGALSLYSEM 265
             L  G  +  ++  A  L  +M
Sbjct: 398 DTLAWGLTRAGKVHEAQELMEKM 420



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 169/339 (49%), Gaps = 1/339 (0%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M  + + P   T+ +V  GF  A    + K ++  M++ G       + +++  LCK G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
            DEA +LL  M     +  A  Y+T+++  C   RV  A+EL   M          +Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           ++   CK K I+ AL+   EM ++GIKPD  I+N +  GL +  +VE A  LF++M +  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  +  TY T I+GLCK   I  A ELF  +          +YN+LIDG CK   L  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           ++F  +     VPNVVTY+ +I GL   G++  A ++   M +  V PNV T+  LI GF
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            ++    +  +LL +M    + P     +I+++ L + +
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 338



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 6/159 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     VL  ++K   TP+  T++ LI G C   R+ EA  L  ++   G  P V TY
Sbjct: 268 GKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTY 327

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N LCR      A  LF  MA         C P  VTY T++  LC    +D A  L
Sbjct: 328 NILLNSLCRADKLEDAFKLFRGMAQRR------CHPTVVTYNTLLRALCHHKQLDGAHRL 381

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
             +M  K   P+ +TY ++  G   A   +EA+ L  +M
Sbjct: 382 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 157/560 (28%), Positives = 262/560 (46%), Gaps = 76/560 (13%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R       + R+L+S   PD VT+ SLI GLC  +R+ +A  +  +L   G  P+  TY+
Sbjct: 60  RPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYS 119

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVV---------CE----------------- 96
           TLV   CR      A  L  EM        +V         CE                 
Sbjct: 120 TLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMI 179

Query: 97  -----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                P+ VTY T I GLCK G +DK  E+L +M    I P+VVT+ S+I G C A   +
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM--IQHGVRPDAFTYNT 209
           +A ++F  M+++G  P+ +T+++++D L +  ++D    +L+ M  ++ G   + +T+N 
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
            +   C +G+   AK + + M   G    + SY+ +I+G CK+  ++ A  L  +ML  G
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 359

Query: 270 I-KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ-RNGVAADTWTYRTFIDGLCKNGYIVE 327
             KPDV+  NTL  G  +  ++ +A +L  EM+ +N    D  TY T IDG  K G + +
Sbjct: 360 CCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQ 419

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  L   ++ + C+ ++  Y +LI+G  K G  E A  LF  +      P+++TY+ ++ 
Sbjct: 420 AKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLS 479

Query: 388 GLCNDGQMDKARDLFLDMEENA--VVPNVITFDMLIRGFIRINE---------------- 429
                G M KA  ++  ++       P+ IT+ +LI G+ R  +                
Sbjct: 480 AFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGW 539

Query: 430 --------------------PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
                               PSK + +  +M + + +P ASI + +V L  +    +NS 
Sbjct: 540 SCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTG-DVNSA 598

Query: 470 PSFT--VHEQQEEVDESNVK 487
            S    ++E+   VD SN++
Sbjct: 599 RSMVQEMNEKGHLVDASNLE 618



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 235/452 (51%), Gaps = 16/452 (3%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +    VT+T+LI GLC    +  A AL  K+   GC P+V TYT L++GLC+      A+
Sbjct: 6   YDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAI 65

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
              + M          CEP+ VTY ++I GLC    +D A  +L ++      PN +TY+
Sbjct: 66  QTVKRMLRSG------CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYS 119

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF-NVIM---DELCKNGKMDEASRLLDL 194
           +++   C  +  ++A+ L  EM+ +G   N+V + + I    +  C++ + +   R  D 
Sbjct: 120 TLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYE--CRDGDE 177

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           MI+ G  PD  TYNT + G C  G+++   E+   M+  G    V ++  +I+G CK   
Sbjct: 178 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANR 237

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ--RNGVAADTWTY 312
           I+ A  ++  ML +G  PD + ++ +   L   ++++   ++ + MQ  + G   + +T+
Sbjct: 238 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTH 297

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS-LP 371
             FI  LC++G    A  +   +       ++ +YN +IDGLCKSG ++ A +L R  L 
Sbjct: 298 NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 357

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVPNVITFDMLIRGFIRINEP 430
            G   P+V+ ++ +I G C  G++ +A  L ++M+ +N  VP+V+T++ LI G  +    
Sbjct: 358 SGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSL 417

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +   LL +M+ +   P+    + +++  AK+
Sbjct: 418 KQAKLLLQEMQAVGCKPNVVTYAALINGYAKH 449



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 233/466 (50%), Gaps = 12/466 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L ++  +   P+ VT+T+LI GLC   R  +A     ++   GCEPD+ TY
Sbjct: 24  GDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTY 83

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++GLC  +    A  + +E+   NG F     PN +TY+T++   C+   +D+A+ L
Sbjct: 84  NSLIHGLCMANRMDDAGLVLQELVR-NG-FA----PNHITYSTLVIWNCRRRRLDQARGL 137

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK--RLFIEMMDQGVQPNVVTFNVIMDEL 179
           + +M  +    N+V Y   I GFC A+  +     R   EM++ G  P+VVT+N  +  L
Sbjct: 138 IREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGL 197

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK GK+D+   +L+ M + G+ PD  T+ +++ G C   R++ A ++F  M   GC    
Sbjct: 198 CKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDS 257

Query: 240 FSYSILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            +YSI+++   +   ++    +   M  +  G   +V  HN     L    +   A  + 
Sbjct: 258 LTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNIL 317

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT-LRILKCEFDIRAYNSLIDGLCK 356
             M  +G   +  +Y   IDGLCK+G + +A +L    L    C+ D+  +N+LI G CK
Sbjct: 318 LGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCK 377

Query: 357 SGRLEIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +GRL  A +L   +    + VP+VVTY+ +I G    G + +A+ L  +M+     PNV+
Sbjct: 378 AGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVV 437

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           T+  LI G+ +     +   L  +M      PD    + V+   +K
Sbjct: 438 TYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSK 483



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 145/292 (49%), Gaps = 10/292 (3%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M   G   +VVT+  ++D LCK+G +D A  LL  M   G  P+  TY  L+DG C   R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
            + A +    M   GC+  + +Y+ LI+G C    ++ A  +  E++  G  P+ + ++T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK-----NGY-IVEAVELFH 333
           L +      ++++A  L  EM   G   +   Y   I G C+     + Y   +  E+  
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
           + RI     D+  YN+ I GLCK+G+L+  LE+   +  G + P+VVT+  +I GLC   
Sbjct: 181 SGRIP----DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           ++D A  +F  M E   VP+ +T+ +++    R N    V E+L  M+ +  
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKA 288



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M  +G      TY TL+DG C +G ++ A+ L   M   GC   V +Y+ LI+G CK + 
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
              A+     ML  G +PD+V +N+L  GL   ++++ A  +  E+ RNG A +  TY T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL----CKSGRLEI--ALELFR 368
            +   C+   + +A  L   + +     ++  Y   I G     C+S R E     E+  
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           S      +P+VVTY+  I GLC  G++DK  ++  +M+   + P+V+TF  +I G  + N
Sbjct: 181 S----GRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                 ++   M E   +PD+   SI++D L++
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSR 269



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 45/248 (18%)

Query: 2   GRVSHGFVVLGRI-LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           GR+S    +L  +  K+   PD VT+ +LI G      + +A  L  +++  GC+P+V T
Sbjct: 379 GRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVT 438

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+NG  +      A +LF+EM+         C P+ +TY T++    K G + KA+ 
Sbjct: 439 YAALINGYAKHGMYEEAESLFDEMSAKG------CFPDIITYNTVLSAFSKAGMMSKAEG 492

Query: 121 LLLQMKDKN--IKPNVVTYTSVIRGFCYAKD---------------WN------------ 151
           +  Q+K+K     P+ +TY  +I G+C A+D               W+            
Sbjct: 493 VYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAK 552

Query: 152 ---------EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
                    +A  ++ +M+DQ   P+   FN ++    + G ++ A  ++  M + G   
Sbjct: 553 LAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLV 612

Query: 203 DAFTYNTL 210
           DA     L
Sbjct: 613 DASNLEAL 620


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 243/493 (49%), Gaps = 24/493 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    F +L  +++  F PD  T+T +I  LC   ++ ++  LF +++  G  PDV+T
Sbjct: 430 VGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYT 489

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++  C+      A + F+EM +      V C PN VTYT ++    K   + +A +
Sbjct: 490 YTILIDSFCKAGLIEQARSWFDEMRS------VGCSPNVVTYTALLHAYLKSKQLIQAHD 543

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---------------- 164
           +  +M D    PN VTY+++I G C A +  +A  ++ +++                   
Sbjct: 544 IFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCT 603

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + PNVVT+  ++D LCK  K+ +A  LLD M+  G  P+   Y+ L+DGFC  G++++A+
Sbjct: 604 IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQ 663

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           E+F+ M   G   +V +Y+ LI+   K+  ++ A+ + SEML+    P+VV +  +  GL
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGL 723

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            ++ ++E+A  L   M+  G + +  TY   IDGL K G    +++LF  +    C  + 
Sbjct: 724 SKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY 783

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y  LI+  C +G L+ A  L   +       ++  Y   + G     +   +  L  +
Sbjct: 784 VTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEE 841

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           ME +  VP    + MLI  F +       +EL  ++ E++   + +   +   L+    +
Sbjct: 842 MESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCL 901

Query: 465 SLNSLPSFTVHEQ 477
           +     +FT++ +
Sbjct: 902 ASQVEEAFTLYTE 914



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 212/461 (45%), Gaps = 32/461 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA--L 78
           P+   F SL+ G C       A  LF ++   G  P    Y   +  +C       A  L
Sbjct: 339 PNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELL 398

Query: 79  NL----FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
           +L    +EEM          C  N V        LC  G  +KA ++L +M  K   P+ 
Sbjct: 399 DLVEKVYEEM------LAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDT 452

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
            TYT VI   C AK   ++  LF EM   GV P+V T+ +++D  CK G +++A    D 
Sbjct: 453 STYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDE 512

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   G  P+  TY  LL  +  + ++  A ++F  M    C     +YS LI+G CK  E
Sbjct: 513 MRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGE 572

Query: 255 IEGALSLYSEMLSKG----------------IKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           I+ A  +Y +++                   I P+VV +  L  GL +  +V  A +L D
Sbjct: 573 IQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLD 632

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCK 356
            M   G   +   Y   IDG CK G I  A E+F  LR+ KC +   +  Y SLID + K
Sbjct: 633 AMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVF--LRMTKCGYLPSVHTYTSLIDRMFK 690

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            GRL++A+++   +      PNVVTY+ MI GL   G+++KA +L   MEE    PNV+T
Sbjct: 691 DGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVT 750

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +  LI G  +  +    ++L  +M      P+     ++++
Sbjct: 751 YTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLIN 791



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 221/488 (45%), Gaps = 58/488 (11%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V   F++   + ++   PD  T+T LI   C    I +A + F ++R  GC P+V TYT
Sbjct: 467 KVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYT 526

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGN------------------GEFGVVCE-------- 96
            L++   ++   I A ++F  M +                    GE    CE        
Sbjct: 527 ALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGT 586

Query: 97  -------------------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
                              PN VTY  +IDGLCK   V  A ELL  M     +PN + Y
Sbjct: 587 SGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVY 646

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            ++I GFC     + A+ +F+ M   G  P+V T+  ++D + K+G++D A ++L  M+ 
Sbjct: 647 DALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLN 706

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
               P+  TY  ++DG    G +  A  L   ME  GC   V +Y+ LI+G  K  + + 
Sbjct: 707 DSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADA 766

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           +L L+ +M SKG  P+ V +  L         ++ A  L DEM+          Y   + 
Sbjct: 767 SLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQ 826

Query: 318 GLCKNGY----IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL--- 370
           G  K       ++E +E   T+ I         Y  LID   K+GRLE ALEL + L   
Sbjct: 827 GFSKKFIASLGLLEEMESHETVPIAP------VYGMLIDSFSKAGRLETALELHKELVEV 880

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
              + + +   Y+ +I  LC   Q+++A  L+ +M    +VP++I F  L++G I +N+ 
Sbjct: 881 SSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKW 940

Query: 431 SKVIELLH 438
            + ++L +
Sbjct: 941 DEALQLCY 948



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 31/479 (6%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC  P+ VT+ +L+ G   + +      +   +   GC P+   + +LV+G C       
Sbjct: 301 SCI-PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAY 359

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG------FVDKAKELLLQMKDKNI 130
           A  LF  M            P  V Y   I  +C +        +D  +++  +M   + 
Sbjct: 360 AYKLFNRMTTCGSP------PGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASC 413

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
             N V   +  R  C    + +A ++  EMM +G  P+  T+  ++  LC+  K++++  
Sbjct: 414 VLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL 473

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M + GV PD +TY  L+D FC  G +  A+  F  M S+GC   V +Y+ L++ Y 
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG------ 304
           K+K++  A  ++  M+     P+ V ++ L  GL +  ++++A ++++++          
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESD 593

Query: 305 ----------VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                     +A +  TY   IDGLCK   + +A EL   +    CE +   Y++LIDG 
Sbjct: 594 FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGF 653

Query: 355 CKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           CK G+++ A E+F R   CG L P+V TY+ +I  +  DG++D A  +  +M  ++  PN
Sbjct: 654 CKIGKIDNAQEVFLRMTKCGYL-PSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPN 712

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           V+T+  +I G  ++ E  K + LL  M+E    P+    + ++D L K   +  SL  F
Sbjct: 713 VVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLF 771



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 210/473 (44%), Gaps = 31/473 (6%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LGR+    + P AVT+ +L++ L +  ++     +  ++   G   D  T       LC+
Sbjct: 192 LGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCK 251

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 ALN+ E+      +F +    +TV  T +I GL +    ++A   L +M+  + 
Sbjct: 252 VGRWADALNMLEKE-----DFNL----DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSC 302

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PNVVTY +++ GF   K +   KR+   MM +G  PN   FN ++   C  G    A +
Sbjct: 303 IPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYK 362

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA------KELFVSMESMGCKHTVFSYSI 244
           L + M   G  P    YN  +   C    + +A      ++++  M +  C     + + 
Sbjct: 363 LFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTAN 422

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
                C   + E A  +  EM+ KG  PD   +  +   L +  +VE++F LF EM+R G
Sbjct: 423 FSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAG 482

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           V  D +TY   ID  CK G I +A   F  +R + C  ++  Y +L+    KS +L  A 
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAH 542

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA---------------RDLFLDMEEN- 408
           ++F  +      PN VTYS +I GLC  G++ KA                D + +  +  
Sbjct: 543 DIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTC 602

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            + PNV+T+  LI G  +  + S   ELL  M      P+  +   ++D   K
Sbjct: 603 TIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK 655



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 142/320 (44%), Gaps = 49/320 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL  +L     P+ VT+T++I GL     I +A  L + +   GC P+V TY
Sbjct: 692 GRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTY 751

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GL +T     +L LF++M N  G     C PN VTY  +I+  C  G +D+A  L
Sbjct: 752 TALIDGLGKTGKADASLKLFKQM-NSKG-----CAPNYVTYRVLINHCCAAGLLDEAHLL 805

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK  +   ++  Y   ++GF  +K +  +  L  EM      P    + +++D   K
Sbjct: 806 LDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSK 863

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFT---YNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            G+++ A  L   +++     +  +   Y +L+   CL  +V                  
Sbjct: 864 AGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQV------------------ 905

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
                            E A +LY+EM  KGI PD+++  +L  GL E+++ + A +L  
Sbjct: 906 -----------------EEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCY 948

Query: 299 EMQRNGVAADTWTYRTFIDG 318
                GV    W      DG
Sbjct: 949 GRCHEGV---NWQDNKSFDG 965



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 124/316 (39%), Gaps = 11/316 (3%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+RL  E+ +   +      NV++   C++G  DEA   L  +   G RP A TYN L+ 
Sbjct: 153 AERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQ 212

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
                G+V     +   M + G      +        CK      AL++  +   +    
Sbjct: 213 VLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNMLEK---EDFNL 269

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D V+   +  GL E      A      M+ N    +  TYRT + G  K         + 
Sbjct: 270 DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRII 329

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCN 391
           + +    C  +   +NSL+ G C +G    A +LF R   CG   P  V Y+I IG +C 
Sbjct: 330 NMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGS-PPGYVAYNIFIGSICG 388

Query: 392 DGQMDKA------RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
             ++  A        ++ +M   + V N +      R    + +  K  ++L +M     
Sbjct: 389 QEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGF 448

Query: 446 MPDASIVSIVVDLLAK 461
           +PD S  + V+  L +
Sbjct: 449 VPDTSTYTKVITFLCQ 464



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 7/241 (2%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++L+   C++   + AL     +   G +P  V +N L   L    QVE  F++  EM  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G   D  T   F   LCK G   +A+ +           D      +I GL ++     
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDF---NLDTVLCTQMISGLMEASLFNE 289

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+     + C   +PNVVTY  ++ G     Q    + +   M      PN   F+ L+ 
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
           G+    + +   +L ++M      P     +I +  +   E     LP+  + +  E+V 
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQE----ELPNAELLDLVEKVY 405

Query: 483 E 483
           E
Sbjct: 406 E 406


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 236/459 (51%), Gaps = 8/459 (1%)

Query: 3   RVSHGFVVLGRILK-SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           ++S    ++G++   SCF PD V++ +++  LC + ++ EA  L   ++  G  P+  T+
Sbjct: 227 KLSEAIGLIGKMKDFSCF-PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTF 285

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+G C+      A  + + MA  N        P+  TY  +I GLCK+G +D+A  L
Sbjct: 286 NILVSGYCKLGWLKEAAQVIDLMAQNN------VLPDVWTYNMLIGGLCKDGKIDEAFRL 339

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M++  + P+VVTY ++I G        +   L  +M  +GV+PN VT+NV++    K
Sbjct: 340 KDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVK 399

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GKMD A   L  M + G  PD  T+NTL++G+C  GR++ A  +   M   G K    +
Sbjct: 400 EGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 459

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            + +++  C  ++++ A  L S    +G   D V + TL +G F+  +   A KL+DEM+
Sbjct: 460 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMK 519

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +     TY T I GLC +G   ++++  + L       D   YN++I G C+ G++E
Sbjct: 520 EKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVE 579

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +    +      P++ T +I++ GLC +G +DKA  LF          + +T++ +I
Sbjct: 580 KAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTII 639

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            G  + +   +  +LL +M+E  + PD    + ++  LA
Sbjct: 640 SGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALA 678



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 239/457 (52%), Gaps = 9/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPDVF 59
           R  H   +  R+ +    P+ +T  +LI  L    ++  +  + A+F+ +   G + +  
Sbjct: 154 RPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTN 213

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           T+  L+ G C  +    A+ L  +M +        C P+ V+Y TI+D LCK+G +++A+
Sbjct: 214 TFNILIYGCCIENKLSEAIGLIGKMKD------FSCFPDNVSYNTILDVLCKKGKLNEAR 267

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +LLL MK+  + PN  T+  ++ G+C      EA ++   M    V P+V T+N+++  L
Sbjct: 268 DLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGL 327

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK+GK+DEA RL D M    + PD  TYNTL++G           EL   ME  G K   
Sbjct: 328 CKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNA 387

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y++++  Y K  +++ A +   +M   G  PD V  NTL  G  +  ++  AF++ DE
Sbjct: 388 VTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDE 447

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M R G+  ++ T  T +  LC    + +A +L  +        D  +Y +LI G  K G+
Sbjct: 448 MSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGK 507

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
              A++L+  +    ++P+++TY+ MIGGLC+ G+ D++ D   ++ E+ +VP+  T++ 
Sbjct: 508 SVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNT 567

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +I G+ R  +  K  +  +KM + +  PD    +I++
Sbjct: 568 IILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/438 (31%), Positives = 229/438 (52%), Gaps = 20/438 (4%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           TF  LI G C E+++ EA  L  K++ F C PD  +Y T+++ LC+      A +L  +M
Sbjct: 214 TFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDM 273

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            N NG       PN  T+  ++ G CK G++ +A +++  M   N+ P+V TY  +I G 
Sbjct: 274 KN-NGLL-----PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGL 327

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS-----RLLDLMIQHG 199
           C     +EA RL  EM +  + P+VVT+N ++     NG  D +S      L+D M   G
Sbjct: 328 CKDGKIDEAFRLKDEMENLKLLPDVVTYNTLI-----NGCFDCSSSLKGFELIDKMEGKG 382

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V+P+A TYN ++  +   G++++A      ME  G      +++ LINGYCK   +  A 
Sbjct: 383 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAF 442

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +  EM  KG+K + V  NT+   L    +++ A+KL     + G   D  +Y T I G 
Sbjct: 443 RMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGY 502

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K+G  VEA++L+  ++  +    I  YN++I GLC SG+ + +++    L    LVP+ 
Sbjct: 503 FKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDE 562

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH- 438
            TY+ +I G C +GQ++KA      M + +  P++ T ++L+RG        K ++L + 
Sbjct: 563 TTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNT 622

Query: 439 ---KMKEINVMPDASIVS 453
              K K I+ +   +I+S
Sbjct: 623 WISKGKAIDAVTYNTIIS 640



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 216/484 (44%), Gaps = 64/484 (13%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     V+  + ++   PD  T+  LI GLC + +I EA  L  ++      PDV T
Sbjct: 295 LGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVT 354

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG    S ++    L ++M       G   +PN VTY  ++    KEG +D A  
Sbjct: 355 YNTLINGCFDCSSSLKGFELIDKME------GKGVKPNAVTYNVVVKWYVKEGKMDNAGN 408

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +M++    P+ VT+ ++I G+C A   +EA R+  EM  +G++ N VT N I+  LC
Sbjct: 409 ELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 468

Query: 181 -----------------------------------KNGKMDEASRLLDLMIQHGVRPDAF 205
                                              K+GK  EA +L D M +  + P   
Sbjct: 469 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSII 528

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYNT++ G C +G+ + + +    +   G      +Y+ +I GYC+  ++E A   +++M
Sbjct: 529 TYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKM 588

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           + K  KPD+   N L  GL     +++A KLF+     G A D  TY T I GLCK    
Sbjct: 589 VKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRF 648

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLV-------- 376
            EA +L   +   K   D   YN+++  L  +GR++ A E   R +  G L         
Sbjct: 649 EEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNK 708

Query: 377 --------------PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
                         PN VT+S  I  LC  G+   A  +  +  +  +  +  T+  L+ 
Sbjct: 709 RKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLME 768

Query: 423 GFIR 426
           G I+
Sbjct: 769 GLIK 772



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 133/257 (51%), Gaps = 3/257 (1%)

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING---YCKNKEIEGALSLYSE 264
           +T +  +    R +HA ++F  M+ +  K  + + + LIN    Y     +  + +++S+
Sbjct: 143 DTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSD 202

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           ++  G+K +    N L  G    +++  A  L  +M+      D  +Y T +D LCK G 
Sbjct: 203 VIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGK 262

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + EA +L   ++      +   +N L+ G CK G L+ A ++   +    ++P+V TY++
Sbjct: 263 LNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNM 322

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +IGGLC DG++D+A  L  +ME   ++P+V+T++ LI G    +   K  EL+ KM+   
Sbjct: 323 LIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKG 382

Query: 445 VMPDASIVSIVVDLLAK 461
           V P+A   ++VV    K
Sbjct: 383 VKPNAVTYNVVVKWYVK 399



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 104/200 (52%), Gaps = 7/200 (3%)

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK-----N 322
           K ++   VI +T        ++   A ++F+ M+R  +  +  T  T I+ L +     +
Sbjct: 133 KKVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPS 192

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
            Y+ +A+  F  +  L  + +   +N LI G C   +L  A+ L   +      P+ V+Y
Sbjct: 193 VYLSKAI--FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSY 250

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++  LC  G++++ARDL LDM+ N ++PN  TF++L+ G+ ++    +  +++  M +
Sbjct: 251 NTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQ 310

Query: 443 INVMPDASIVSIVVDLLAKN 462
            NV+PD    ++++  L K+
Sbjct: 311 NNVLPDVWTYNMLIGGLCKD 330



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 29/206 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V   F    +++K  F PD  T   L++GLC E  + +A  LF      G   D  TY
Sbjct: 576 GQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTY 635

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++GLC+      A +L  EM     + G    P+  TY  I+  L   G + +A+E 
Sbjct: 636 NTIISGLCKEDRFEEAFDLLAEMEEK--KLG----PDCYTYNAILSALADAGRMKEAEEF 689

Query: 122 LL------QMKDKNIK-----------------PNVVTYTSVIRGFCYAKDWNEAKRLFI 158
           +       +++D+ I                  PN VT++  I   C    + +A  +  
Sbjct: 690 MSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQ 749

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGK 184
           E   +G+  +  T+  +M+ L K  K
Sbjct: 750 ESTQKGITLHKSTYISLMEGLIKRRK 775


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 200/371 (53%), Gaps = 13/371 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  + + F  L+KGLCA+ R  +A  +  + +    C P+VF+
Sbjct: 104 GRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFS 163

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T ++ GLC  + +  AL L   MA+  G     C PN V+Y+T+IDGL K G  DKA  
Sbjct: 164 HTIILKGLCHENRSQEALELLHMMADDGGG----CLPNVVSYSTVIDGLLKGGDPDKAYA 219

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I PNVV Y+S+I   C  +  ++A  +   M+  GV PN  T+  ++   C
Sbjct: 220 TYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFC 279

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G++ EA + L+ M  +GV P+  TY++ +D  C  GR   A+++F SM   G K  + 
Sbjct: 280 SSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDIT 339

Query: 241 SYSILINGYCKNKEIEGAL----SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           +YS L++GY     IEGAL     L+  M+   ++PD  + NTL     +  +V+ A  +
Sbjct: 340 TYSSLLHGY----AIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLV 395

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F +M++ G+  +  TY T I+G CK   +  A+ LF  +       +   YN ++ GL +
Sbjct: 396 FSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFR 455

Query: 357 SGRLEIALELF 367
           +GR   A E +
Sbjct: 456 TGRTATAKEFY 466



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 201/417 (48%), Gaps = 14/417 (3%)

Query: 28  SLIKGLCAESRIMEAAAL--FTKLRVFGCE---PDVFTYTTLVNGLCRTSHTIVALNLFE 82
           SL   L   +R   AAA+  F ++   G     P V TY  L+   C      +      
Sbjct: 55  SLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALG 114

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ-MKDKNIKPNVVTYTSVI 141
            +     + G   EP  + +  ++ GLC +   D A +++L+ M + +  PNV ++T ++
Sbjct: 115 HVV----KKGFRVEP--IIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIIL 168

Query: 142 RGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +G C+     EA  L   M D G    PNVV+++ ++D L K G  D+A      M+   
Sbjct: 169 KGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRR 228

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+   Y++++   C    ++ A E+   M   G     F+Y+ L++G+C + ++  A+
Sbjct: 229 ILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAI 288

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
               +M S G++P+VV +++    L +  +   A K+FD M + G+  D  TY + + G 
Sbjct: 289 KFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGY 348

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
              G +VE   LF  +     + D   +N+LI    K G+++ A+ +F  +    L PN 
Sbjct: 349 AIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNC 408

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           VTYS +I G C   +M+ A  LF +M  N V PN IT++++++G  R    +   E 
Sbjct: 409 VTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEF 465



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 173/346 (50%), Gaps = 3/346 (0%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P V TY  +I   C A   +        ++ +G +   + FN ++  LC + + D+A 
Sbjct: 86  VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145

Query: 190 RL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILI 246
            + L  M +    P+ F++  +L G C   R   A EL   M  +  GC   V SYS +I
Sbjct: 146 DIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVI 205

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G  K  + + A + Y EML + I P+VVI++++   L +   +++A ++ D M +NGV 
Sbjct: 206 DGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVT 265

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            + +TY + + G C +G + EA++    +     E ++  Y+S +D LCK+GR   A ++
Sbjct: 266 PNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F S+    L P++ TYS ++ G   +G + +   LF  M ++ + P+   F+ LI    +
Sbjct: 326 FDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAK 385

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
             +  + + +  KM++  + P+    S +++   K     N+L  F
Sbjct: 386 QGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALF 431



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 7/178 (3%)

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF---DIRA 346
            E A  +FDE+ R G+ A   +    +  + ++     AV  F+ +           +  
Sbjct: 34  AEDALDVFDELLRRGIGAPIRSLNGALADVARDN-PAAAVSRFNRMARAGASMVTPTVHT 92

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL-DM 405
           Y  LI   C +GRL++       +         + ++ ++ GLC D + D A D+ L  M
Sbjct: 93  YGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGM 152

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI--NVMPDASIVSIVVDLLAK 461
            E + VPNV +  ++++G    N   + +ELLH M +     +P+    S V+D L K
Sbjct: 153 TELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLK 210


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 245/527 (46%), Gaps = 93/527 (17%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+    F ++  ++   F PD  T++ +I  LC   ++ +A  LF +++  G  PDV+T
Sbjct: 266 MGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYT 325

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++  C+      A + F+EM +      + C  N VTYT ++    K   + +A +
Sbjct: 326 YTILIDSFCKAGLIEQARSWFDEMRS------IGCSANVVTYTALLHAYLKAKQLPQASD 379

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD----------------QG 164
           +  +M D    PN +TY++++ G C A +  +A  ++ +++                   
Sbjct: 380 IFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDS 439

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + PNVVT+  ++D LCK  K+ +A  LLD M+ +G  P+   Y+ L+DGFC  G++++A+
Sbjct: 440 IAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQ 499

Query: 225 ELFVSMESMG-----------------------------------CKHTVFSYSILINGY 249
           E+F+ M   G                                   C   V +Y+ +I+G 
Sbjct: 500 EVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGL 559

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+  E + AL L S M  KG  P+VV +  L  GL +  +V+ + +LF +M   G A + 
Sbjct: 560 CRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNY 619

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS-------------------- 349
            TYR  I+  C  G + EA  L   ++       ++ Y S                    
Sbjct: 620 VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELE 679

Query: 350 -------------LIDGLCKSGRLEIALELFRS---LPCGVLVPNVVTYSIMIGGLCNDG 393
                        LID   K+GRLE ALEL +    L   + + +   Y+ +I  LC   
Sbjct: 680 SHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLAS 739

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           Q++KA +L+ ++    VVP +  F  LI+G I++N+ ++ ++L + +
Sbjct: 740 QLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSI 786



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 215/472 (45%), Gaps = 32/472 (6%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++  ++K    P+   F SL+   C       A  L  ++   GC P    Y   +  +C
Sbjct: 164 IINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSIC 223

Query: 70  R----TSHTIVAL--NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
                 S  ++AL   ++EEM          C  N V        LC  G  D A +++ 
Sbjct: 224 GGEELPSPDLLALAEKVYEEM------LASSCVLNKVNTANFARCLCGMGKFDMAFQIIK 277

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M  K   P+  TY+ VI   C A    +A  LF EM   GV P+V T+ +++D  CK G
Sbjct: 278 VMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAG 337

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +++A    D M   G   +  TY  LL  +    ++  A ++F  M   GC     +YS
Sbjct: 338 LIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYS 397

Query: 244 ILINGYCKNKEIEGALSLYSEML----------------SKGIKPDVVIHNTLFVGLFEI 287
            L++G CK  EI+ A  +Y++++                +  I P+VV +  L  GL + 
Sbjct: 398 ALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKA 457

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIR 345
           H+V  A +L D M  NG   +   Y   IDG CK G I  A E+F  LR+ KC +   + 
Sbjct: 458 HKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVF--LRMSKCGYLPTVH 515

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y SLID + K  RL++A+++   +      PNVVTY+ MI GLC  G+  KA  L   M
Sbjct: 516 TYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMM 575

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           EE    PNV+T+  LI G  +  +    ++L  +M      P+     ++++
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLIN 627



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 228/469 (48%), Gaps = 31/469 (6%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC  P+ VT+ +L+ G   + ++     +   +   GC P+   + +LV+  C       
Sbjct: 137 SCI-PNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPY 195

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC------KEGFVDKAKELLLQMKDKNI 130
           A  L + MA+        C P  V Y   I  +C          +  A+++  +M   + 
Sbjct: 196 AYKLLKRMADCG------CPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSC 249

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
             N V   +  R  C    ++ A ++   MM +G  P+  T++ ++  LC+  K+++A  
Sbjct: 250 VLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFL 309

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M   GV PD +TY  L+D FC  G +  A+  F  M S+GC   V +Y+ L++ Y 
Sbjct: 310 LFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYL 369

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM---------- 300
           K K++  A  +++ M+  G  P+ + ++ L  GL +  ++++A +++ ++          
Sbjct: 370 KAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSD 429

Query: 301 ------QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                   + +A +  TY   IDGLCK   +V+A EL   +    CE +   Y++LIDG 
Sbjct: 430 FYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGF 489

Query: 355 CKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           CK G+++ A E+F R   CG L P V TY+ +I  +  D ++D A  +   M E++  PN
Sbjct: 490 CKVGKIDNAQEVFLRMSKCGYL-PTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPN 548

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           V+T+  +I G  RI E  K ++LL  M+E    P+    + ++D L K+
Sbjct: 549 VVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKS 597



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 194/462 (41%), Gaps = 48/462 (10%)

Query: 48  KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN---GEFGVVC--------- 95
           +L+ FG  P   TY  LV  L       +   + +EM+       +F V C         
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 96  --------------EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
                         + +TV  T +I GL +    D+A   L +M+  +  PNVVTY +++
Sbjct: 90  RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GF   K     KR+   MM +G  PN   FN ++   C       A +LL  M   G  
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCP 209

Query: 202 PDAFTYNTLLDGFCLTGRVNH------AKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           P    YN  +   C    +        A++++  M +  C     + +      C   + 
Sbjct: 210 PGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 269

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A  +   M+ KG  PD   ++ +   L E  +VE+AF LF EM+  GV  D +TY   
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           ID  CK G I +A   F  +R + C  ++  Y +L+    K+ +L  A ++F  +     
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDM----------------EENAVVPNVITFDM 419
            PN +TYS ++ GLC  G++ KA +++  +                  +++ PNV+T+  
Sbjct: 390 PPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGA 449

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           LI G  + ++     ELL  M      P+  I   ++D   K
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCK 491



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 161/345 (46%), Gaps = 45/345 (13%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +L +   P+ + + +LI G C   +I  A  +F ++   G  P V TYT+L++ + 
Sbjct: 466 LLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMF 525

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +     +A+ +  +M   +      C PN VTYT +IDGLC+ G   KA +LL  M++K 
Sbjct: 526 KDRRLDLAMKVLSQMVESS------CTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKG 579

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             PNVVTYT++I G   +   + + +LFI+M  +G  PN VT+ V+++  C  G +DEA 
Sbjct: 580 CSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAH 639

Query: 190 RLLDLMIQ---------------------------------HGVRPDAFTYNTLLDGFCL 216
            LL  M Q                                 HG  P A  Y  L+D F  
Sbjct: 640 SLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSK 699

Query: 217 TGRVNHAKELFVSMESMGCKHTVFS---YSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            GR+  A EL   M  +     + S   Y+ LI   C   ++E A  LYSE+  KG+ P+
Sbjct: 700 AGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPE 759

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           + +   L  GL ++++   A +L   +   GV    W      DG
Sbjct: 760 LSVFVCLIKGLIKVNKWNEALQLCYSICDEGV---NWQSNNSFDG 801



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 88/220 (40%), Gaps = 7/220 (3%)

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           E+   G +P    +N L   L    Q++  F++  EM  +G   D +T   F   LCK G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
              +A+ +         + D      +I GL ++   + A+     + C   +PNVVTY 
Sbjct: 90  RWSDALVMIEREDF---KLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            ++ G     Q+   + +   M +    PN   F+ L+  +    +     +LL +M + 
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 444 NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDE 483
              P     +I +  +   E     LPS  +    E+V E
Sbjct: 207 GCPPGYVAYNIFIGSICGGE----ELPSPDLLALAEKVYE 242


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 221/451 (49%), Gaps = 9/451 (1%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPDVFTYTTLVN 66
            V   +L+    P  VT+ +L+     E R  +   L  ++   G  C P+  TY  ++ 
Sbjct: 217 AVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIA 276

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GL R  +   A  L EEM           + ++ TY  +I GL   GFV K  +L L+M+
Sbjct: 277 GLARKGYLEEAAELVEEMRLSK-------KASSFTYNPLITGLLARGFVKKVDDLQLEME 329

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++ I P VVTY ++I G   +     A+  F+EM   G+ P+V+T+N +++  CK G   
Sbjct: 330 NEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQK 389

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA  L   + + G+ P   TYN L+DG+C  G +  A+ L   M   GC   V++Y+IL+
Sbjct: 390 EALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILM 449

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G      +      + EMLSKG++PD   +NT       +  + ++F+L + +   G++
Sbjct: 450 KGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGIS 509

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           +DT TY   IDGLCK G + +A EL   +     + D   Y  LI   C+ G L  A + 
Sbjct: 510 SDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKF 569

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           F  +    L P+ VTY+++I   C  G +  A   F  M E  V PN IT+++LI    R
Sbjct: 570 FNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 629

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +          ++M E  ++P+    ++++D
Sbjct: 630 MGRTQLAYRHFYEMLERGLVPNKYTYTLLID 660



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 218/442 (49%), Gaps = 5/442 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD      +++ L   +R  + +A+  ++   G EP + TY TL++   +         
Sbjct: 193 APDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDM 252

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +EM       G  C PN VTY  +I GL ++G++++A EL+ +M+    K +  TY  
Sbjct: 253 LLKEME----ARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK-KASSFTYNP 307

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G        +   L +EM ++G+ P VVT+N ++  L ++G+++ A      M   G
Sbjct: 308 LITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMG 367

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD  TYN+LL+G+C  G    A  LF  +   G   TV +Y+ILI+GYC+  ++E A 
Sbjct: 368 LLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEAR 427

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  EM+ +G  PDV  +  L  G   +  +    + FDEM   G+  D + Y T I   
Sbjct: 428 RLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAE 487

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
              G I ++ +L   + +     D   YN LIDGLCK+G L+ A EL   +    L P+ 
Sbjct: 488 ITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDC 547

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +TY+ +I   C  G + +AR  F DM  + + P+ +T+ ++I  + R            K
Sbjct: 548 ITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRK 607

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M E  V P+    ++++  L +
Sbjct: 608 MLEEGVEPNEITYNVLIHALCR 629



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 164/333 (49%), Gaps = 41/333 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+ ++I GL    +I  A A F ++R  G  PDV TY +L+NG C+  +   AL L
Sbjct: 335 PTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLL 394

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F ++            P  +TY  +IDG C+ G +++A+ L  +M ++   P+V TYT +
Sbjct: 395 FGDLRRAG------LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTIL 448

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPN-------------------------------- 168
           ++G          +  F EM+ +G++P+                                
Sbjct: 449 MKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGI 508

Query: 169 ---VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
               VT+N+++D LCK G + +A  L+  MI +G++PD  TY  L+   C  G +  A++
Sbjct: 509 SSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARK 568

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            F  M S G   +  +Y+++I+ YC+   +  A   + +ML +G++P+ + +N L   L 
Sbjct: 569 FFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 628

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            + + + A++ F EM   G+  + +TY   IDG
Sbjct: 629 RMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 164/341 (48%), Gaps = 3/341 (0%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M    + P+V     V+R    A  W++   +  EM+  G++P++VT+N ++D   K G
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEG 245

Query: 184 KMDEASRLLDLMIQHGVR--PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + D+   LL  M   G    P+  TYN ++ G    G +  A EL   M  +  K + F+
Sbjct: 246 RKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMR-LSKKASSFT 304

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G      ++    L  EM ++GI P VV +N +  GL +  Q+E A   F EM+
Sbjct: 305 YNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR 364

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  TY + ++G CK G   EA+ LF  LR       +  YN LIDG C+ G LE
Sbjct: 365 AMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 424

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +     +P+V TY+I++ G  N   +   R+ F +M    + P+   ++  I
Sbjct: 425 EARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRI 484

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
              I + + SK  +L   +    +  D    +I++D L K 
Sbjct: 485 CAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKT 525



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 146/295 (49%), Gaps = 5/295 (1%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F EM   GV P+V   N ++  L    + D+ S +   M+Q G+ P   TYNTLLD F  
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 217 TGRVNHAKELFVSMESMG--CKHTVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPD 273
            GR +    L   ME+ G  C     +Y+++I G  +   +E A  L  EM LSK  K  
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK--KAS 301

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +N L  GL     V++   L  EM+  G+     TY   I GL ++G I  A   F 
Sbjct: 302 SFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFV 361

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R +    D+  YNSL++G CK+G  + AL LF  L    L P V+TY+I+I G C  G
Sbjct: 362 EMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 421

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +++AR L  +M E   +P+V T+ +L++G   +   +   E   +M    + PD
Sbjct: 422 DLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPD 476



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 129/280 (46%), Gaps = 37/280 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G      ++ G + ++   P  +T+  LI G C    + EA  L  ++   GC PDV+TY
Sbjct: 386 GNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTY 445

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGV----------VC---------------- 95
           T L+ G    SH + +L +  E  +     G+          +C                
Sbjct: 446 TILMKG----SHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLRE 501

Query: 96  -------EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                    +TVTY  +IDGLCK G +  A+EL++QM    ++P+ +TYT +I   C   
Sbjct: 502 VIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERG 561

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
              EA++ F +M+  G+ P+ VT+ VI+   C+ G +  A      M++ GV P+  TYN
Sbjct: 562 FLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 621

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            L+   C  GR   A   F  M   G     ++Y++LI+G
Sbjct: 622 VLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 6/177 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +S  F +   I+    + D VT+  LI GLC    + +A  L  ++   G +PD  T
Sbjct: 490 LGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCIT 549

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++  C       A   F +M +          P+ VTYT II   C+ G +  A  
Sbjct: 550 YTCLIHAHCERGFLREARKFFNDMISDG------LPPSAVTYTVIIHAYCRRGNLYSAYG 603

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
              +M ++ ++PN +TY  +I   C       A R F EM+++G+ PN  T+ +++D
Sbjct: 604 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLID 660


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 209/396 (52%), Gaps = 9/396 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V      LG +++  F  D  T + +++  C +  +  A   F +    G  P++  
Sbjct: 215 LGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLIN 274

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T ++ GLC+      A  + EEM  G G      +PN  T+T +IDGLCK+G+ +KA  
Sbjct: 275 FTCMIEGLCKRGSVKQAFEMLEEMV-GRGW-----KPNVYTHTALIDGLCKKGWTEKAFR 328

Query: 121 LLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L L++ + +N KPNV+TYT++I G+C  +  N A+ L   M +QG+ PN  T+  ++D  
Sbjct: 329 LFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGH 388

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G  + A  L+++M + G  P+  TYN ++DG C  GRV  A ++  S    G     
Sbjct: 389 CKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADK 448

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ILI+ +CK  EI+ AL L+++M+  GI+PD+  + TL        +++ +   F+E
Sbjct: 449 VTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEE 508

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
             R G+     TY + I G C+ G +  A++ FH +    C  D   Y +LI GLCK  +
Sbjct: 509 AVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSK 568

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLC--NDG 393
           L+ A  L+ ++    L P  VT   +    C  +DG
Sbjct: 569 LDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDG 604



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 215/444 (48%), Gaps = 9/444 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG V +   +   +      P+ V++  ++ G C    ++E+      +   G   D  T
Sbjct: 180 MGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNAT 239

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            + +V   C       AL  F        E G+   PN + +T +I+GLCK G V +A E
Sbjct: 240 LSLIVREFCEKGFVTRALWYFRRFC----EMGL--RPNLINFTCMIEGLCKRGSVKQAFE 293

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE-AKRLFIEMM-DQGVQPNVVTFNVIMDE 178
           +L +M  +  KPNV T+T++I G C  K W E A RLF++++  +  +PNV+T+  ++  
Sbjct: 294 MLEEMVGRGWKPNVYTHTALIDGLC-KKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISG 352

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            C++ KM+ A  LL  M + G+ P+  TY TL+DG C  G    A EL   M   G    
Sbjct: 353 YCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPN 412

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +Y+ +++G CK   ++ A  +       G+  D V +  L     +  ++++A  LF+
Sbjct: 413 VCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFN 472

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M ++G+  D  +Y T I   C+   + E+   F            + Y S+I G C+ G
Sbjct: 473 KMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREG 532

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            L +AL+ F  +       + +TY  +I GLC   ++D+AR L+  M E  + P  +T  
Sbjct: 533 NLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRV 592

Query: 419 MLIRGFIRINEPSKVIELLHKMKE 442
            L   + +I++    + +L ++++
Sbjct: 593 TLAYEYCKIDDGCSAMVVLERLEK 616



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 213/448 (47%), Gaps = 7/448 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     ++  +      P   T   ++K +     +  A  LF ++   G +P+  +
Sbjct: 145 IGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVS 204

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +V G C+  + + +    +    G  E G V +    T + I+   C++GFV +A  
Sbjct: 205 YRVMVVGYCKLGNVLES----DRWLGGMIERGFVVD--NATLSLIVREFCEKGFVTRALW 258

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +  +  ++PN++ +T +I G C      +A  +  EM+ +G +PNV T   ++D LC
Sbjct: 259 YFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLC 318

Query: 181 KNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           K G  ++A RL L L+     +P+  TY  ++ G+C   ++N A+ L   M+  G     
Sbjct: 319 KKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNT 378

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+G+CK    E A  L + M  +G  P+V  +N +  GL +  +V+ A+K+   
Sbjct: 379 NTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKS 438

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
             RNG+ AD  TY   I   CK   I +A+ LF+ +     + DI +Y +LI   C+  R
Sbjct: 439 GFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKR 498

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ +   F       LVP   TY+ MI G C +G +  A   F  M ++    + IT+  
Sbjct: 499 MKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGA 558

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMP 447
           LI G  + ++  +   L   M E  + P
Sbjct: 559 LISGLCKQSKLDEARCLYDAMIEKGLTP 586



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 9/436 (2%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANG 87
           ++K      R+ EA  +  ++   G  P   T   +V  +        A NLF+EM A G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
                   +PN V+Y  ++ G CK G V ++   L  M ++    +  T + ++R FC  
Sbjct: 198 -------VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEK 250

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
                A   F    + G++PN++ F  +++ LCK G + +A  +L+ M+  G +P+ +T+
Sbjct: 251 GFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTH 310

Query: 208 NTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
             L+DG C  G    A  LF+ +  S   K  V +Y+ +I+GYC+++++  A  L S M 
Sbjct: 311 TALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMK 370

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +G+ P+   + TL  G  +    ERA++L + M   G + +  TY   +DGLCK G + 
Sbjct: 371 EQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQ 430

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA ++  +      + D   Y  LI   CK   ++ AL LF  +    + P++ +Y+ +I
Sbjct: 431 EAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLI 490

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
              C + +M ++   F +     +VP   T+  +I G+ R       ++  H+M +    
Sbjct: 491 AVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCA 550

Query: 447 PDASIVSIVVDLLAKN 462
            D+     ++  L K 
Sbjct: 551 SDSITYGALISGLCKQ 566



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 180/370 (48%), Gaps = 10/370 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFT 60
           G V   F +L  ++   + P+  T T+LI GLC +    +A  LF KL R    +P+V T
Sbjct: 286 GSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 345

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++G CR       +N  E + +   E G+   PNT TYTT+IDG CK G  ++A E
Sbjct: 346 YTAMISGYCRDE----KMNRAEMLLSRMKEQGLA--PNTNTYTTLIDGHCKAGNFERAYE 399

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+  M ++   PNV TY +++ G C      EA ++       G+  + VT+ +++ E C
Sbjct: 400 LMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHC 459

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  ++ +A  L + M++ G++PD  +Y TL+  FC   R+  ++  F      G   T  
Sbjct: 460 KQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNK 519

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I GYC+   +  AL  +  M   G   D + +  L  GL +  +++ A  L+D M
Sbjct: 520 TYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAM 579

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     T  T     CK   I +       L  L+ +  +R  N+L+  LC   ++
Sbjct: 580 IEKGLTPCEVTRVTLAYEYCK---IDDGCSAMVVLERLEKKLWVRTVNTLVRKLCSERKV 636

Query: 361 EIALELFRSL 370
            +A   F  L
Sbjct: 637 GMAALFFHKL 646



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 203/429 (47%), Gaps = 21/429 (4%)

Query: 55  EPDVFTY---TTLVNGLCRTSHTIVALNLFEEMANGNGEFG------VVCEPNTVT---- 101
           +P+  T+    T+V  L   + ++VAL+ F   A  + +F       + C  + ++    
Sbjct: 70  DPNSLTHDQAVTIVASLASDAGSMVALSFFN-WAIASSKFRHFTRLYIACAASLISNKNF 128

Query: 102 ------YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
                    ++    + G V +A E++++M ++ + P+  T   V++          A+ 
Sbjct: 129 EKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAEN 188

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           LF EM  +GVQPN V++ V++   CK G + E+ R L  MI+ G   D  T + ++  FC
Sbjct: 189 LFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFC 248

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G V  A   F     MG +  + +++ +I G CK   ++ A  +  EM+ +G KP+V 
Sbjct: 249 EKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVY 308

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
            H  L  GL +    E+AF+LF ++ R+     +  TY   I G C++  +  A  L   
Sbjct: 309 THTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSR 368

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           ++      +   Y +LIDG CK+G  E A EL   +      PNV TY+ ++ GLC  G+
Sbjct: 369 MKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGR 428

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           + +A  +      N +  + +T+ +LI    +  E  + + L +KM +  + PD    + 
Sbjct: 429 VQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTT 488

Query: 455 VVDLLAKNE 463
           ++ +  + +
Sbjct: 489 LIAVFCREK 497


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 221/445 (49%), Gaps = 19/445 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+   F SLI  L   +R+ +AA     +   G  PDV T+T L+ G C+      A  +
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK-DKNIKPNVVTYTS 139
           F+EM   N      C+P+   Y  +IDG CKE  +D+A ELL +M+ ++ I+P+VV Y S
Sbjct: 69  FQEMIKSN-----RCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNS 123

Query: 140 VIRGFCYAKDWNEAKRLFIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++ G C +  + EA +   E M+ QG  P VVT+  ++   CK  KM  A  + + M++ 
Sbjct: 124 IVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLER 183

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            ++P   +Y+ ++DG    GRV  A  +   ME++GC+  V  Y+ LI+G CK+  ++ A
Sbjct: 184 KIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDA 243

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            +LY  M   G  P+   + TL        + E A  LFD + R+    D   Y   + G
Sbjct: 244 YALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSG 302

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL----PCGV 374
           LC+   + +A  LF  +R+     D  AYN L+ G  +SGR E A  +   L     C  
Sbjct: 303 LCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGC-- 360

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
            V N++TY+ +I G C +  M     LF +M +  + P+  T+  LI   +   E  +  
Sbjct: 361 -VANLLTYNTVIAGCCLESGM----VLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAF 415

Query: 435 ELLHKMKEINVMPDASIVSIVVDLL 459
           +L  +M    + P + ++  VV  L
Sbjct: 416 DLCEEMLASGLSPPSGVLGRVVARL 440



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 196/402 (48%), Gaps = 15/402 (3%)

Query: 4   VSHGFVVLGRILKS--CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFT 60
           V   + +   ++KS  C  PD   +  LI G C E R+  A  L  ++RV    +PDV  
Sbjct: 62  VERAWEIFQEMIKSNRC-QPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVI 120

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y ++V+GLCR++  + A    +E     G     C P  VTYT++I G CK   +  A  
Sbjct: 121 YNSIVDGLCRSNRFLEAWKFLDETMVRQG-----CSPTVVTYTSLIRGACKAKKMKLAMT 175

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M ++ I+P +V+Y+ +I G   A    +A R+  EM   G + NVV +  ++D LC
Sbjct: 176 IWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLC 235

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G +D+A  L  +M + G  P+  TY TL+D FC   R   A  LF  +    C   V 
Sbjct: 236 KSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CPLDVA 294

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ +++G C+ + ++ A +L+ EM   G+  D   +N L  G F   + E AF++ +E+
Sbjct: 295 MYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEEL 354

Query: 301 QRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
             + G  A+  TY T I G C    +V    LF+ +R      D   Y++LID L  SG 
Sbjct: 355 GDDPGCVANLLTYNTVIAGCCLESGMV----LFYEMRQRGIAPDFATYSALIDRLLGSGE 410

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           +  A +L   +    L P       ++  LC   + D A  L
Sbjct: 411 IRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKL 452



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 4/300 (1%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           PN   F  ++D L K+ ++ +A+R L+LM   G+ PD  T+  L+ GFC    V  A E+
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 227 FVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNTLFVGL 284
           F  M +S  C+   F Y +LI+GYCK   ++ AL L  EM + + I+PDVVI+N++  GL
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 285 FEIHQVERAFKLFDE-MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
              ++   A+K  DE M R G +    TY + I G CK   +  A+ +++ +   K +  
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           I +Y+ +IDGL K+GR+  A  + R +       NVV Y+ +I GLC  G +D A  L+ 
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYR 248

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            M+ +   PN  T+  LI  F R +     + L   +++   + D ++ + VV  L +  
Sbjct: 249 IMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPL-DVAMYTAVVSGLCRER 307



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 11/176 (6%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D   +T+++ GLC E R+ +A ALF ++R+ G   D   Y  L++G  R+  +  A  + 
Sbjct: 292 DVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRIL 351

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKE-GFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           EE+ +  G     C  N +TY T+I G C E G V     L  +M+ + I P+  TY+++
Sbjct: 352 EELGDDPG-----CVANLLTYNTVIAGCCLESGMV-----LFYEMRQRGIAPDFATYSAL 401

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           I     + +   A  L  EM+  G+ P       ++  LC + + D A++L+++ +
Sbjct: 402 IDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKLIEMAM 457


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 227/453 (50%), Gaps = 31/453 (6%)

Query: 2   GRVSHGF-VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           GR+  G  ++  R  K C  P+ V + +LI G C +  +  A  LF KL++ G  P + T
Sbjct: 222 GRIEDGIKLIESRWGKGC-VPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQT 280

Query: 61  YTTLVNGLCRTSH---------------TIVALNLFEEMANGNGEFGV------------ 93
           + +LVNG C+                    V + ++  + +   + G             
Sbjct: 281 FGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMS 340

Query: 94  --VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
              CEP+ VTY T+I+  C  G V++A++LL Q   + + PN +TYT ++ G+C   ++ 
Sbjct: 341 ENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYT 400

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A    IEM   G++ +++++  ++  L   G++D A  + D M+  G+ PDA  YN L+
Sbjct: 401 KATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLM 460

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           +G    G+++ AK +   M         F Y+ L++G+ ++  ++ A  L+  ++ KG+ 
Sbjct: 461 NGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLD 520

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P VV +N +  G  +   ++ A    D+M+R     D +T+ T IDG  K   +   +++
Sbjct: 521 PGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKI 580

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +    C+ ++  Y SLI+G C+ G  ++A +LF  +    L P+VVTYSI+IG  C 
Sbjct: 581 FGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCK 640

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           + ++ KA   F  M  N   PN   F  L+ GF
Sbjct: 641 EAKLGKAVSYFELMLINKCTPNDAAFHYLVNGF 673



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 232/497 (46%), Gaps = 41/497 (8%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T + ++KGLC + RI +   L       GC P++  Y TL++G C+      A  LF
Sbjct: 207 DNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLF 266

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +++       G +  P   T+ ++++G CK G  +    LLL+MKD+ +  NV  Y ++I
Sbjct: 267 KKLKMK----GFI--PTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNII 320

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
                     +AK    EM +   +P++VT+N +++  C  G+++EA +LL+  I+ G+ 
Sbjct: 321 DARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLA 380

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TY  L+ G+C  G    A +  + M + G +  + SY  LI+G     E++ AL++
Sbjct: 381 PNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTI 440

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              M+++GI PD  I+N L  GLF+  ++  A  +  EM    +A D + Y T +DG  +
Sbjct: 441 RDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIR 500

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA------------------ 363
           +G + EA +LF  +     +  +  YN +I G  KSG ++ A                  
Sbjct: 501 HGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFT 560

Query: 364 -----------------LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
                            L++F  +      PNVVTY+ +I G C  G+   A  LF  M 
Sbjct: 561 FSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMR 620

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
            + + P+V+T+ +LI  F +  +  K +     M      P+ +    +V+     + + 
Sbjct: 621 SHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATA 680

Query: 467 NSLPSFTVHEQQEEVDE 483
            S     +HE    + E
Sbjct: 681 VSREPNNLHENSRSMFE 697



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/497 (28%), Positives = 229/497 (46%), Gaps = 50/497 (10%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTY 61
           V HG V L   L     P      SL+  L    RI  A  L+ ++  R  G +  V  Y
Sbjct: 155 VYHGVVKLHNSL-----PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNY 209

Query: 62  TT--LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TT  +V GLC        + L E        +G  C PN V Y T+IDG CK+G V+ A 
Sbjct: 210 TTSIMVKGLCLKGRIEDGIKLIES------RWGKGCVPNIVFYNTLIDGYCKKGEVESAY 263

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV-------------- 165
           +L  ++K K   P + T+ S++ GFC    +     L +EM D+G+              
Sbjct: 264 KLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDAR 323

Query: 166 ---------------------QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
                                +P++VT+N +++  C  G+++EA +LL+  I+ G+ P+ 
Sbjct: 324 YKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNK 383

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  L+ G+C  G    A +  + M + G +  + SY  LI+G     E++ AL++   
Sbjct: 384 LTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDR 443

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+++GI PD  I+N L  GLF+  ++  A  +  EM    +A D + Y T +DG  ++G 
Sbjct: 444 MMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGN 503

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + EA +LF  +     +  +  YN +I G  KSG ++ A+     +     VP++ T+S 
Sbjct: 504 LDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFST 563

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I G      M+    +F  M +    PNV+T+  LI G+ R  E     +L   M+   
Sbjct: 564 IIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHG 623

Query: 445 VMPDASIVSIVVDLLAK 461
           + P     SI++    K
Sbjct: 624 LKPSVVTYSILIGSFCK 640



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 204/414 (49%), Gaps = 20/414 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L + ++    P+ +T+T L+ G C +    +A     ++   G E D+ +Y
Sbjct: 362 GEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISY 421

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++GL        AL + + M N     G++  P+   Y  +++GL K+G +  AK +
Sbjct: 422 GALIHGLVVAGEVDTALTIRDRMMNR----GIL--PDANIYNVLMNGLFKKGKLSMAKVM 475

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D+NI P+   Y +++ GF    + +EAK+LF  ++++G+ P VV +NV++    K
Sbjct: 476 LTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSK 535

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G MD A   +D M +    PD FT++T++DG+     +N   ++F  M    CK  V +
Sbjct: 536 SGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVT 595

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LINGYC+  E + A  L+S M S G+KP VV ++ L     +  ++ +A   F+ M 
Sbjct: 596 YTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELML 655

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIV---EAVELFHTLRILKCEFDIR-----------AY 347
            N    +   +   ++G           E   L    R +  +F  R           AY
Sbjct: 656 INKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAY 715

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           N ++  LC+   ++ AL+L   +    L  + V++  +I G+C +G   + R++
Sbjct: 716 NCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNM 769



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 182/402 (45%), Gaps = 32/402 (7%)

Query: 2   GRVSHGFVVLG----------RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV 51
           G + HG VV G          R++     PDA  +  L+ GL  + ++  A  + T++  
Sbjct: 422 GALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLD 481

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
               PD F Y TLV+G  R  +   A  LF+ +     E G+  +P  V Y  +I G  K
Sbjct: 482 QNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLII----EKGL--DPGVVGYNVMIKGFSK 535

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G +D A   + +M+  +  P++ T++++I G+    + N   ++F  M+ Q  +PNVVT
Sbjct: 536 SGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVT 595

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  +++  C+ G+   A +L  +M  HG++P   TY+ L+  FC   ++  A   F  M 
Sbjct: 596 YTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELML 655

Query: 232 SMGCKHTVFSYSILINGYCKNKEI----------EGALSL----YSEMLSKGIKPDVVIH 277
              C     ++  L+NG+   K            E + S+    +S M+  G       +
Sbjct: 656 INKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAY 715

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N + + L +   V+ A +L ++M   G+ +D  ++   I G+C  G   E   +  +  +
Sbjct: 716 NCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMI-SCDL 774

Query: 338 LKCEFDIRAYNSL-IDGLCKSGRLEIALELFRSLPCGVLVPN 378
            + E  I    SL +D     G +  A  + +++  G + PN
Sbjct: 775 NEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 20/291 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + +  + + ++ ++   PD  TF+++I G   +  +     +F  +    C+P+V TY
Sbjct: 537 GMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTY 596

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L+NG CR   T +A  LF  M +         +P+ VTY+ +I   CKE  + KA   
Sbjct: 597 TSLINGYCRKGETKMAEKLFSMMRSHG------LKPSVVTYSILIGSFCKEAKLGKAVSY 650

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAK---------DWNEAKR-----LFIEMMDQGVQP 167
              M      PN   +  ++ GF   K         + +E  R      F  M+  G   
Sbjct: 651 FELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQ 710

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
               +N I+  LC+   +  A +L + M+  G+  DA ++  L+ G CL G     + + 
Sbjct: 711 KAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMI 770

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
               + G       YS+ ++ +     I  A  +   M+   + P+  ++N
Sbjct: 771 SCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNN 821


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 220/469 (46%), Gaps = 54/469 (11%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A   F  +R F C PDV+TY  +++ L + +  ++AL ++  M   N      C PN  
Sbjct: 144 KAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLN------CLPNVA 197

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T++ +IDGLCK G V  A  L  +M  + I P+  TY  VI G C +K  ++A RLF +M
Sbjct: 198 TFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKM 257

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            D GV P+ VT N +++  C   ++DEA  LL L  + G   D   Y+ L+ G     R 
Sbjct: 258 KDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRY 317

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
              + L+  M     K  V+ Y+I++ G  +  ++  AL L +EM   G+ PD V +N L
Sbjct: 318 EDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVL 377

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G  ++  +  A  L  E+ R+    +  TY   I G+C+NG   +A E+F+ +  L C
Sbjct: 378 IKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGC 437

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSL---------------PCGVL---------- 375
                 +NSLIDGLCK+G+LE A  LF  +               P  VL          
Sbjct: 438 YPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVE 497

Query: 376 -----------------------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
                                   P + TY+I++ G C  G  + A  LF +M+   + P
Sbjct: 498 QLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSP 557

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + +T+  LI G +R        ++  +M++    PDA++   ++  + +
Sbjct: 558 DTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCR 606



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 228/462 (49%), Gaps = 20/462 (4%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
              V  R++K    P+  TF+ LI GLC    + +A  LF ++   G  PD FTY  +++
Sbjct: 180 ALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVIS 239

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GLCR+     A  LF++M +     GV   P+ VT   +++G C    VD+A  LL   +
Sbjct: 240 GLCRSKRVDDAYRLFDKMKDS----GV--GPDFVTCNALLNGFCMLDRVDEAFSLLRLFE 293

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
                 +V  Y+ +IRG   AK + + + L+ +M++  V+P+V  + ++M  L + GK+ 
Sbjct: 294 KDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVR 353

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A  LL+ M + GV PD   YN L+ GFC  G ++ A+ L + +    C   V +YSILI
Sbjct: 354 DALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILI 413

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ--RNG 304
           +G C+N     A  +++EM   G  P  V  N+L  GL +  Q+E+A  LF +M+  RN 
Sbjct: 414 SGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNP 473

Query: 305 V-----------AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
                         D+ + +  ++ LC +G I +A  +   L        I  YN L++G
Sbjct: 474 SLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNG 533

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            CK G    A +LFR +    L P+ VTY  +I GL    + + A  +F  ME+N   P+
Sbjct: 534 FCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPD 593

Query: 414 VITFDMLIRGFIRINEPSKVIEL-LHKMKEINVMPDASIVSI 454
              +  ++    R  E  +   L L  ++ I    D +I +I
Sbjct: 594 AAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAI 635



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 241/516 (46%), Gaps = 58/516 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + RV   F +L    K  +  D   ++ LI+GL    R  +   L+ K+     +PDV+ 
Sbjct: 279 LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYL 338

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT ++ GL        AL L  EM     E GVV  P+TV Y  +I G C  G + +A+ 
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMT----ESGVV--PDTVCYNVLIKGFCDMGLLSEARS 392

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L++   +  PNV TY+ +I G C      +A+ +F EM   G  P+ VTFN ++D LC
Sbjct: 393 LQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLC 452

Query: 181 KNGKMDEASRLLDLMIQHGVRP--------------DAFTYNTLLDGFCLTGRVNHAKEL 226
           K G++++A  LL   ++ G  P              D+ +   +++  C +G ++ A  +
Sbjct: 453 KTGQLEKA-HLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRI 511

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
            + +   G    +++Y+IL+NG+CK     GA  L+ EM  KG+ PD V + TL  GL  
Sbjct: 512 LMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLR 571

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTLRILKCE---- 341
             + E A+K+FD+M++NG   D   YRT +  +C+   +  A  L+   LR ++ +    
Sbjct: 572 FQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEA 631

Query: 342 -----------------------------FDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
                                        FD+  Y   + GLC++ R+  AL++F  L  
Sbjct: 632 IKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEE 691

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFL-DMEENAVVPNVITFDMLIRGFIRINEPS 431
             +V        +I  L  +G +D+A D+FL  +E+  ++   +   +L +   R  E  
Sbjct: 692 YKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRRRVANRILTKLVRRKGEMG 751

Query: 432 K--VIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           K   I LL +MK +    DA ++     LL ++ I 
Sbjct: 752 KDRAIYLLCRMKSVGYDLDAHLLPWTKSLLHRHNIQ 787



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 176/357 (49%)

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           I D L  +  ++   + L  +K+  IK +   +  +I+ +      ++A   F  M D  
Sbjct: 97  ITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFD 156

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
             P+V T+N+I+D L +   +  A  +   M++    P+  T++ L+DG C +G V  A 
Sbjct: 157 CTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDAL 216

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            LF  M   G     F+Y ++I+G C++K ++ A  L+ +M   G+ PD V  N L  G 
Sbjct: 217 HLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGF 276

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
             + +V+ AF L    +++G   D   Y   I GL +     +   L+  +     + D+
Sbjct: 277 CMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDV 336

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y  ++ GL ++G++  ALEL   +    +VP+ V Y+++I G C+ G + +AR L L+
Sbjct: 337 YLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLE 396

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  +   PNV T+ +LI G  R        E+ ++M+++   P A   + ++D L K
Sbjct: 397 ISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCK 453



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 158/314 (50%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G++ +   F V++    K G  D+A      M      PD +TYN +LD       +  A
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             ++  M  + C   V ++SILI+G CK+  ++ AL L+ EM  +GI PD   +  +  G
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L    +V+ A++LFD+M+ +GV  D  T    ++G C    + EA  L           D
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +R Y+ LI GL ++ R E    L+R +    + P+V  Y+IM+ GL   G++  A +L  
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +M E+ VVP+ + +++LI+GF  +   S+   L  ++   +  P+    SI++  + +N 
Sbjct: 361 EMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNG 420

Query: 464 ISLNSLPSFTVHEQ 477
           ++ ++   F   E+
Sbjct: 421 LTRDAQEIFNEMEK 434



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 3/121 (2%)

Query: 345 RAYNS---LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           RA+ S   + D L     LE+  +   +L  G +  +   + ++I      G  DKA + 
Sbjct: 89  RAWESCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMET 148

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F  M +    P+V T++M++   I+ N     + +  +M ++N +P+ +  SI++D L K
Sbjct: 149 FGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCK 208

Query: 462 N 462
           +
Sbjct: 209 S 209


>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 562

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 116/328 (35%), Positives = 181/328 (55%), Gaps = 16/328 (4%)

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
           G + +PN V Y TIID +CK+   + A +L  +M  K I P+V TY ++I GFC      
Sbjct: 234 GKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLK 293

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A  LF +M  + + P+V TFN+++D  CK G++ EA   L +M++ G++PD  TYN+L+
Sbjct: 294 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLM 353

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           D +CL   VN AK +F +M   G    V SYSI+IN +CK K ++ A+ L+ EM  K I 
Sbjct: 354 DRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIF 413

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEM----------------QRNGVAADTWTYRTF 315
           P+V+ +++L  GL +  ++  A +L DEM                +  G+  + +TY   
Sbjct: 414 PNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTIL 473

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           IDGLCK G + +A  +F  L +      +  Y  +I G C  G  + A+ L   +     
Sbjct: 474 IDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCC 533

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +PN VTY I+I  L ++ + DKA + F+
Sbjct: 534 IPNAVTYEIIIRSLFDNDENDKAENFFV 561



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 173/330 (52%), Gaps = 16/330 (4%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +LL ++  K ++PN+V Y ++I   C  K  N+A  L+ EM+ + + P+V T+N +++  
Sbjct: 227 QLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGF 286

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C  GK+ +A  L + M    + PD +T+N L+D FC  GRV  AK     M   G K  V
Sbjct: 287 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDV 346

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ L++ YC   E+  A S+++ M  +G+  +V  ++ +     +I  V++A KLF E
Sbjct: 347 VTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKE 406

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI--------------- 344
           M    +  +  TY + IDGLCK+G I  A+EL   +     + DI               
Sbjct: 407 MHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPN 466

Query: 345 -RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              Y  LIDGLCK GRLE A  +F  L        V TY++MI G CN G  D+A  L  
Sbjct: 467 MFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLS 526

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            M++N  +PN +T++++IR     +E  K 
Sbjct: 527 KMKDNCCIPNAVTYEIIIRSLFDNDENDKA 556



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 174/315 (55%), Gaps = 16/315 (5%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           +QPN+V +N I+D +CK+   ++A  L   M+   + PD  TYN L++GFC+ G++  A 
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            LF  M S      V++++IL++ +CK   ++ A +  + M+ +GIKPDVV +N+L    
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
             +++V +A  +F+ M   GV A+  +Y   I+  CK   + +A++LF  +   +   ++
Sbjct: 357 CLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNV 416

Query: 345 RAYNSLIDGLCKSGRLEIALEL----------------FRSLPCGVLVPNVVTYSIMIGG 388
             Y+SLIDGLCKSGR+  ALEL                 R L    + PN+ TY+I+I G
Sbjct: 417 ITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDG 476

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC  G+++ AR++F D+        V T+ ++I GF       + + LL KMK+   +P+
Sbjct: 477 LCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPN 536

Query: 449 ASIVSIVVDLLAKNE 463
           A    I++  L  N+
Sbjct: 537 AVTYEIIIRSLFDND 551



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 28/342 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPDVFTYTTLVN 66
           +L R+      P+ V + ++I  +C +    +A  L++++   R+F   PDV TY  L+N
Sbjct: 228 LLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIF---PDVNTYNALIN 284

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G C       A+ LF +M + N        P+  T+  ++D  CKEG V +AK  L  M 
Sbjct: 285 GFCIVGKLKDAIGLFNKMTSEN------INPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 338

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            + IKP+VVTY S++  +C   + N+AK +F  M  +GV  NV +++++++  CK   +D
Sbjct: 339 KQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVD 398

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM---------------- 230
           +A +L   M    + P+  TY++L+DG C +GR+++A EL   M                
Sbjct: 399 QAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQL 458

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
           +  G +  +F+Y+ILI+G CK   +E A +++ ++L KG    V  +  +  G       
Sbjct: 459 KDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLF 518

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           + A  L  +M+ N    +  TY   I  L  N    +A   F
Sbjct: 519 DEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 25/297 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  ++      PD  TF  L+   C E R+ EA      +   G +PDV T
Sbjct: 289 VGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVT 348

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L++  C  +    A ++F  M++     GV    N  +Y+ +I+  CK   VD+A +
Sbjct: 349 YNSLMDRYCLVNEVNKAKSIFNTMSHR----GVTA--NVRSYSIMINRFCKIKMVDQAMK 402

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I PNV+TY+S+I G C +   + A  L  EM D+G QP+++T         
Sbjct: 403 LFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITL-------- 454

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
                    +L D     G+RP+ FTY  L+DG C  GR+  A+ +F  +   G   TV 
Sbjct: 455 -------TRQLKD----QGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVN 503

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           +Y+++I+G+C     + A++L S+M      P+ V +  +   LF+  + ++A   F
Sbjct: 504 TYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 101/205 (49%)

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
             L L   +  K ++P++V++NT+   + +      AF L+ EM    +  D  TY   I
Sbjct: 224 APLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALI 283

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +G C  G + +A+ LF+ +       D+  +N L+D  CK GR++ A      +    + 
Sbjct: 284 NGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK 343

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+VVTY+ ++   C   +++KA+ +F  M    V  NV ++ ++I  F +I    + ++L
Sbjct: 344 PDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKL 403

Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
             +M    + P+    S ++D L K
Sbjct: 404 FKEMHHKQIFPNVITYSSLIDGLCK 428



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 22/155 (14%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDV----------------FTYTTL 64
           P+ +T++SLI GLC   RI  A  L  ++   G +PD+                FTYT L
Sbjct: 414 PNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTIL 473

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           ++GLC+      A N+FE++        V       TYT +I G C +G  D+A  LL +
Sbjct: 474 IDGLCKGGRLEDARNIFEDLLVKGYNITVN------TYTVMIHGFCNKGLFDEAMTLLSK 527

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           MKD    PN VTY  +IR      + ++A+  F++
Sbjct: 528 MKDNCCIPNAVTYEIIIRSLFDNDENDKAENFFVK 562


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 233/443 (52%), Gaps = 12/443 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           V +  LI+  C   R  +A   F  ++  G  P V     +++   +++ T  A  L+ E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M      F +  + + VT+  +I+ LCKEG + KAKE +  M+   IKPNVVTY ++I G
Sbjct: 182 M------FRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHG 235

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           +C       A+ +F  M  +GV+P+  T+   +  +CK GK++EAS +L+ M + G+RP 
Sbjct: 236 YCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPT 295

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY---CKNKEIEGALS 260
           A TYNTL+DG+C  G +  A +    M   G   TV +Y++LI+     CK  E +G + 
Sbjct: 296 AVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIK 355

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
              EM  KG+ PD V +N L  G      V++AF L DEM   G+     TY + I  L 
Sbjct: 356 ---EMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLS 412

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + +A +LF  +       D+  +N+LIDG C +G ++ A  + + +    +VP+ V
Sbjct: 413 KRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEV 472

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++ ++ G C +G+++ AR+L  +M+   + P+ I+++ LI G+ +  +      +  +M
Sbjct: 473 TFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 532

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
             I   P     + ++  L KNE
Sbjct: 533 LSIGFNPTLLTYNALIQGLCKNE 555



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 217/421 (51%), Gaps = 6/421 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R    +V+   + +       VTF  +I  LC E ++ +A      +   G +P+V TY 
Sbjct: 171 RTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYN 230

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+++G C       A  +F+ M       GV  +P++ TY + I G+CKEG +++A  +L
Sbjct: 231 TIIHGYCSRGRVEGARMIFDLMKCR----GV--KPDSYTYGSFISGMCKEGKLEEASGML 284

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +MK+  ++P  VTY ++I G+C   +   A     +M+ +G+ P V T+N+++  L  +
Sbjct: 285 EKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLD 344

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            KMDEA  ++  M + G+ PD+ TYN L++G+C  G V  A  L   M S G + T  +Y
Sbjct: 345 CKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTY 404

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI    K   ++ A  L+ +++ KGI PD+++ N L  G      ++RAF +  EM +
Sbjct: 405 TSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQ 464

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             V  D  T+ T + G C+ G +  A EL   ++    + D  +YN+LI G  K G ++ 
Sbjct: 465 MKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKD 524

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  +   +      P ++TY+ +I GLC + + D A  L  +M    + PN  T+  LI 
Sbjct: 525 AFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584

Query: 423 G 423
           G
Sbjct: 585 G 585



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 192/371 (51%), Gaps = 6/371 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+ ++I G C+  R+  A  +F  ++  G +PD +TY + ++G+C+      A  +
Sbjct: 224 PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGM 283

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E+M     E G+   P  VTY T+IDG C +G ++ A +   +M  + + P V TY  +
Sbjct: 284 LEKMK----EIGL--RPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNML 337

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I         +EA  +  EM ++G+ P+ VT+N++++  C+ G + +A  L D MI  G+
Sbjct: 338 IHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGI 397

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P   TY +L+      GR+  A +LF  +   G    +  ++ LI+G+C N  ++ A +
Sbjct: 398 QPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFA 457

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +  EM    + PD V  NTL  G     +VE A +L +EM+  G+  D  +Y T I G  
Sbjct: 458 MLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYS 517

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + +A  +   +  +     +  YN+LI GLCK+   + A +L + +    + PN  
Sbjct: 518 KRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDN 577

Query: 381 TYSIMIGGLCN 391
           TY  +I G+ N
Sbjct: 578 TYLSLIEGIGN 588



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 183/359 (50%), Gaps = 16/359 (4%)

Query: 6   HGFVVLGRI--------LKSC--FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG+   GR+        L  C    PD+ T+ S I G+C E ++ EA+ +  K++  G  
Sbjct: 234 HGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLR 293

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P   TY TL++G C   +  +A +  ++M       G++  P   TY  +I  L  +  +
Sbjct: 294 PTAVTYNTLIDGYCNKGNLEMAFDYRDKMVRE----GLM--PTVSTYNMLIHALFLDCKM 347

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A  ++ +M +K + P+ VTY  +I G+C   +  +A  L  EM+ +G+QP  VT+  +
Sbjct: 348 DEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSL 407

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  L K G+M +A  L + +++ G+ PD   +N L+DG C  G ++ A  +   M+ M  
Sbjct: 408 IYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKV 467

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                +++ L+ G C+  ++E A  L  EM S+GIKPD + +NTL  G  +   ++ AF+
Sbjct: 468 VPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFR 527

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           + DEM   G      TY   I GLCKN     A +L   +       +   Y SLI+G+
Sbjct: 528 VRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 193/405 (47%), Gaps = 40/405 (9%)

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +F E+    G  G+      V Y  +I   C+    D A E    MK K + P+V     
Sbjct: 105 VFNELGVARGVLGI---KTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACND 161

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++  F  +    +A  L+ EM    ++ +VVTFN++++ LCK GK+ +A   + LM   G
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           ++P+  TYNT++ G+C  GRV  A+ +F  M+  G K   ++Y   I+G CK  ++E A 
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEAS 281

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD--------------------- 298
            +  +M   G++P  V +NTL  G      +E AF   D                     
Sbjct: 282 GMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHAL 341

Query: 299 --------------EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
                         EM   G+  D+ TY   I+G C+ G + +A  L H   I K     
Sbjct: 342 FLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTL-HDEMISKGIQPT 400

Query: 345 R-AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           R  Y SLI  L K GR++ A +LF  +    + P+++ ++ +I G C +G MD+A  +  
Sbjct: 401 RVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLK 460

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +M++  VVP+ +TF+ L++G  R  +     EL+ +MK   + PD
Sbjct: 461 EMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPD 505



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 169/318 (53%), Gaps = 6/318 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L ++ +    P AVT+ +LI G C +  +  A     K+   G  P V TY
Sbjct: 275 GKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTY 334

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ L        A  + +EM+    E G+V  P++VTY  +I+G C+ G V KA  L
Sbjct: 335 NMLIHALFLDCKMDEADGIIKEMS----EKGLV--PDSVTYNILINGYCRCGNVKKAFTL 388

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K I+P  VTYTS+I          +A  LF +++ +G+ P+++ FN ++D  C 
Sbjct: 389 HDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCA 448

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG MD A  +L  M Q  V PD  T+NTL+ G C  G+V  A+EL   M+S G K    S
Sbjct: 449 NGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHIS 508

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GY K  +++ A  +  EMLS G  P ++ +N L  GL +  + + A +L  EM 
Sbjct: 509 YNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMI 568

Query: 302 RNGVAADTWTYRTFIDGL 319
             G+  +  TY + I+G+
Sbjct: 569 SKGITPNDNTYLSLIEGI 586



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 1/235 (0%)

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           EL V+   +G K  V  Y +LI   C+ K  + A   +  M  KG+ P V   N +    
Sbjct: 108 ELGVARGVLGIKTYVL-YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLF 166

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            + ++ E+A+ L+ EM R  + +   T+   I+ LCK G + +A E    +  L  + ++
Sbjct: 167 LKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNV 226

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN++I G C  GR+E A  +F  + C  + P+  TY   I G+C +G++++A  +   
Sbjct: 227 VTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEK 286

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           M+E  + P  +T++ LI G+          +   KM    +MP  S  ++++  L
Sbjct: 287 MKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHAL 341


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 232/497 (46%), Gaps = 46/497 (9%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
            LG    S   P+  +F  L++G  A        AL  +++  G   +  T+  +++ LC
Sbjct: 16  ALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALC 75

Query: 70  RTSHTIVALNLFEEMANGNGE-----FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
                  A++ F    N   E     F  +  P++VTYT I+DGL K G  D   E   +
Sbjct: 76  ARRDLDKAVSYF----NSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEK 131

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M     +P ++TYT ++ G C A     A  +F EM+ +G +P+++ ++ ++D L K G+
Sbjct: 132 MVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGR 191

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +DEA +L+DLMI  G  P A  Y +++ G C  GR+  A +    M     +  V +YS 
Sbjct: 192 VDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSF 251

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           ++ GY    ++E A ++  EM  +   PD + +      L+ I + E A K+F+ M   G
Sbjct: 252 IVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKG 311

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D  TY   ID  CK G +  A  +   +     + +   Y  ++DG  KS RLE AL
Sbjct: 312 CKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEAL 371

Query: 365 ELFRS------LPCGV-------------------------------LVPNVVTYSIMIG 387
           EL++       LP  V                               L P++VTYS++I 
Sbjct: 372 ELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIH 431

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           GL   G  ++A DL  +M +N V+P+  T+  LI+      + S+ +ELL +M +  + P
Sbjct: 432 GLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFP 491

Query: 448 DASIVSIVVDLLAKNEI 464
           D      +V +L ++++
Sbjct: 492 DDHTYGTLVQILCRSDV 508



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 221/430 (51%), Gaps = 9/430 (2%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+ ++   PD+VT+T+++ GL            + K+    CEP + TYT LV+GLC+  
Sbjct: 96  RLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAH 155

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A ++FEEM           +P+ + Y+++IDGL K G VD+A++L+  M  +   P
Sbjct: 156 KVERACDVFEEMIRKGH------KPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPP 209

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
             V YTS++ G C      EA +   EM  + ++P V T++ I+      GK++EA  ++
Sbjct: 210 TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVM 269

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M      PD  +Y   ++     GR   A+++F +M   GCK  + +Y I+I+ +CK 
Sbjct: 270 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKE 329

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +  A  +   M    +KP+  I+  +  G  +  ++E A +L+  + ++G+   T TY
Sbjct: 330 GSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTY 389

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFD--IRAYNSLIDGLCKSGRLEIALELFRSL 370
            T I+ LCK   + EA+EL   ++  K E +  I  Y+ +I GL K G  E A +L   +
Sbjct: 390 NTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 449

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               ++P+  TY+ +I  L   G++ +A +L  +M +  + P+  T+  L++   R ++ 
Sbjct: 450 IDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDV 508

Query: 431 SKVIELLHKM 440
               +LL +M
Sbjct: 509 DAAWDLLQEM 518



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 208/419 (49%), Gaps = 11/419 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    G     +++ S   P  +T+T L+ GLC   ++  A  +F ++   G +PD+  Y
Sbjct: 120 GNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAY 179

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           ++L++GL +      A  L + M A G         P  V YT+I+ GLCK G + +A +
Sbjct: 180 SSLIDGLSKAGRVDEARKLVDLMIARGP-------PPTAVAYTSIVAGLCKCGRIQEAVK 232

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            + +M+ + ++P V TY+ ++ G+       EA  +  EM D+   P+ +++ + ++ L 
Sbjct: 233 TIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALY 292

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+ +EA ++ + M++ G +PD  TY  ++D FC  G +  A  +   M+    K   +
Sbjct: 293 SIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRY 352

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+++++G+ K+  +E AL LY  +L  GI P  V +NT+   L ++ +++ A +L  EM
Sbjct: 353 IYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREM 412

Query: 301 QRNG--VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           QR    +     TY   I GL K G    A +L   +       D   Y SLI  L  +G
Sbjct: 413 QRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAG 472

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           ++  A+EL   +    + P+  TY  ++  LC    +D A DL  +M  N   PN  TF
Sbjct: 473 KVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTF 530



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 9/275 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+V   F V+  +      PD +++T  I+ L +  R  EA  +F  +   GC+PD+ T
Sbjct: 259 MGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHT 318

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++  C+      A ++   M           +PN   YT I+DG  K   +++A E
Sbjct: 319 YGIIIDNFCKEGSMAAATHVLRLMDKA------AVKPNRYIYTMIMDGFVKSSRLEEALE 372

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM--DQGVQPNVVTFNVIMDE 178
           L  ++    I P+ VTY +VI   C  K  +EA  L  EM    + ++P++VT+++I+  
Sbjct: 373 LYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHG 432

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L K G  + A  LL  MI +GV PD FTY +L+      G+V+ A EL   M   G    
Sbjct: 433 LGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPD 492

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
             +Y  L+   C++ +++ A  L  EM+  G  P+
Sbjct: 493 DHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPN 526



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 9/175 (5%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFT 60
           R+     +  RILK    P  VT+ ++I  LC   ++ EA  L  ++  R    EP + T
Sbjct: 366 RLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVT 425

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ +++GL +      A +L  EM +     GV+  P+  TYT++I  L   G V +A E
Sbjct: 426 YSMIIHGLGKVGMEERAFDLLAEMIDN----GVI--PDCFTYTSLIQTLAGAGKVSRAME 479

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           LL +M    I P+  TY ++++  C + D + A  L  EMM  G  PN  TF  +
Sbjct: 480 LLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAV 533


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 233/466 (50%), Gaps = 27/466 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+    F ++  ++   F PD  T++ +I  LC  S++ +A +LF +++  G  P V+TY
Sbjct: 439 GKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTY 498

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++  C+      A   F+EM +        C PN VTYT +I    K   +  A EL
Sbjct: 499 TILIDSFCKAGLIQQARKWFDEMLHKG------CTPNVVTYTALIHAYLKAKQMPVADEL 552

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM--------MDQGVQ------- 166
              M  +  KPNVVTYT++I G C A    +A +++  M        MD+  +       
Sbjct: 553 FEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCE 612

Query: 167 -PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PNV+T+  ++D LCK  ++ EA  LLD M+ HG  P+   Y+ ++DGFC  G++  A+E
Sbjct: 613 GPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQE 672

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F  M   G    +++YS  I+   K+  ++  L + S+ML     P+VVI+  +  GL 
Sbjct: 673 VFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLC 732

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +I + + A+KL  +M+  G   +  TY   IDG  K+G I + +ELF  +    C  +  
Sbjct: 733 KIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFI 792

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y  LI+  C +G L+ A +L   +       +++++  +I G     +   +  L  ++
Sbjct: 793 TYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDEL 850

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            EN  VP    + +LI  +I+       ++LL   +EI+  P  ++
Sbjct: 851 SENESVPVDSLYRILIDNYIKAGRLEVALDLL---EEISSSPSHAV 893



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 223/467 (47%), Gaps = 21/467 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I + C+ P+   F SLI   C       A  LF K+   GC+P    Y   +  +C    
Sbjct: 341 ITEGCY-PNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEE 399

Query: 74  TIVA--LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
              +  L+L E+  +   + GVV   N V  +     LC  G  D+A +++ +M  K   
Sbjct: 400 QPSSDILDLVEKAYSEMLDLGVVL--NKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFV 457

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+  TY+ VI   C A    +A  LF EM   G+ P+V T+ +++D  CK G + +A + 
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            D M+  G  P+  TY  L+  +    ++  A ELF  M   GCK  V +Y+ LI+G+CK
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577

Query: 252 NKEIEGALSLYSEM--------LSKGIK--------PDVVIHNTLFVGLFEIHQVERAFK 295
             +IE A  +Y+ M        + K  K        P+V+ +  L  GL + ++V+ A +
Sbjct: 578 AGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHE 637

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L D M  +G   +   Y   IDG CK G + +A E+F  +       ++  Y+S ID L 
Sbjct: 638 LLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLF 697

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K  RL++ L++   +      PNVV Y+ M+ GLC  G+ D+A  L L MEE    PNV+
Sbjct: 698 KDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVV 757

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T+  +I GF +  +  + +EL   M      P+     ++++    N
Sbjct: 758 TYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSN 804



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 240/473 (50%), Gaps = 25/473 (5%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C TP+ VT+T+LI       ++  A  LF  + + GC+P+V TYT L++G C+     
Sbjct: 524 KGC-TPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIE 582

Query: 76  VALNLFEEMANGNGEFGVV----------CE-PNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
            A  ++  M  G+ E   +          CE PN +TY  ++DGLCK   V +A ELL  
Sbjct: 583 KACQIYARM-RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDT 641

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M     +PN + Y +VI GFC      +A+ +F +M ++G  PN+ T++  +D L K+ +
Sbjct: 642 MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNR 701

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D   ++L  M+++   P+   Y  ++DG C  G+ + A +L + ME  GC   V +Y+ 
Sbjct: 702 LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTA 761

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+G+ K+ +IE  L L+ +M SKG  P+ + +  L         ++ A+KL DEM++  
Sbjct: 762 MIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTY 821

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
                 ++R  I+G  +    + ++ L   L   +       Y  LID   K+GRLE+AL
Sbjct: 822 WPKHILSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVAL 879

Query: 365 ELFRSLPCGV--LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           +L   +       V N   Y+ +I  L +  ++DKA +L+  M    VVP +     LI+
Sbjct: 880 DLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIK 939

Query: 423 GFIRINEPSKVIEL--------LHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
           G I++++  + ++L        +H ++E        +V +V+  + + E  ++
Sbjct: 940 GLIKVDKWQEALQLSDSICQMDIHWLQEKATGRTEEMVKLVIAAMVEAETGVS 992



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 230/475 (48%), Gaps = 28/475 (5%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L R+  S   P+ VT+  L+ G   + ++     + + +   GC P+   + +L++  C
Sbjct: 301 ILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYC 360

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK------EGFVDKAKELLL 123
           ++     A  LF++M          C+P  + Y   I  +C          +D  ++   
Sbjct: 361 KSRDYSYAYKLFKKMIKCG------CQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYS 414

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M D  +  N V  ++  R  C A  +++A ++  EMM +G  P+  T++ ++  LC   
Sbjct: 415 EMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDAS 474

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+++A  L + M ++G+ P  +TY  L+D FC  G +  A++ F  M   GC   V +Y+
Sbjct: 475 KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYT 534

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ-- 301
            LI+ Y K K++  A  L+  ML +G KP+VV +  L  G  +  Q+E+A +++  M+  
Sbjct: 535 ALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGD 594

Query: 302 --------------RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
                          N    +  TY   +DGLCK   + EA EL  T+    CE +   Y
Sbjct: 595 IESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVY 654

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           +++IDG CK G+L+ A E+F  +      PN+ TYS  I  L  D ++D    +   M E
Sbjct: 655 DAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLE 714

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           N+  PNV+ +  ++ G  +I +  +  +L+ KM+E    P+    + ++D   K+
Sbjct: 715 NSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKS 769



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 210/495 (42%), Gaps = 75/495 (15%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L++  C       A     +L+ FG +P   TY  L+    R      A  +  EM +  
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS-- 239

Query: 89  GEFGVVCEPNTVT---YTTIIDGLCKEGF--VDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
             +  V +  T++   Y+    G C+E F  +D+A++ +         P+ V Y  ++ G
Sbjct: 240 --YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFV---------PDTVFYNRMVSG 288

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C A  + EA  +   M      PNVVT+ +++    + G++    R+L +MI  G  P+
Sbjct: 289 LCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPN 348

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE--------- 254
              +N+L+  +C +   ++A +LF  M   GC+     Y+I I   C N+E         
Sbjct: 349 REIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDL 408

Query: 255 --------------------------------IEGALSLYSEMLSKGIKPDVVIHNTLFV 282
                                            + A  +  EM+ KG  PD   ++ +  
Sbjct: 409 VEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIG 468

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
            L +  +VE+AF LF+EM+RNG+    +TY   ID  CK G I +A + F  +    C  
Sbjct: 469 FLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTP 528

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           ++  Y +LI    K+ ++ +A ELF  +      PNVVTY+ +I G C  GQ++KA  ++
Sbjct: 529 NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIY 588

Query: 403 LDM----------------EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             M                  N   PNVIT+  L+ G  + N   +  ELL  M      
Sbjct: 589 ARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCE 648

Query: 447 PDASIVSIVVDLLAK 461
           P+  +   V+D   K
Sbjct: 649 PNQIVYDAVIDGFCK 663



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 12/303 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V  ++ +  ++P+  T++S I  L  ++R+     + +K+    C P+V  
Sbjct: 664 IGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVI 723

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +V+GLC+   T  A  L  +M          C PN VTYT +IDG  K G +++  E
Sbjct: 724 YTEMVDGLCKIGKTDEAYKLMLKMEEKG------CNPNVVTYTAMIDGFGKSGKIEQCLE 777

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M  K   PN +TY  +I   C     +EA +L  EM       ++++   I++   
Sbjct: 778 LFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFS 837

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV- 239
           +  +   +  LLD + ++   P    Y  L+D +   GR+  A +L   + S    H V 
Sbjct: 838 Q--EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISS-SPSHAVS 894

Query: 240 --FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
             + Y+ LI       +++ AL LY+ M+SK + P++ I   L  GL ++ + + A +L 
Sbjct: 895 NKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLS 954

Query: 298 DEM 300
           D +
Sbjct: 955 DSI 957



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 127/312 (40%), Gaps = 10/312 (3%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +  +E+ D   +      N ++ + C+NG  + A   L  +   G +P   TYN L+  F
Sbjct: 162 KFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVF 221

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
               +++ A  +   M S       ++ S      CK  +   A  L  E  ++   PD 
Sbjct: 222 LRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDT 279

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +N +  GL E    E A  +   M+ +    +  TYR  + G  + G +     +   
Sbjct: 280 VFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSM 339

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDG 393
           +    C  +   +NSLI   CKS     A +LF+ +  CG   P  + Y+I IG +C++ 
Sbjct: 340 MITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGC-QPGYLVYNIFIGSVCSNE 398

Query: 394 Q------MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           +      +D     + +M +  VV N +      R      +  +  +++ +M     +P
Sbjct: 399 EQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVP 458

Query: 448 DASIVSIVVDLL 459
           D S  S V+  L
Sbjct: 459 DDSTYSKVIGFL 470



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 6/223 (2%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + L+   C+N     AL     +   G KP    +N L        +++ A+ +  EM  
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRL 360
                D +T   F   LCK G   EA +L         +F  D   YN ++ GLC++   
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAE----DFVPDTVFYNRMVSGLCEASLF 295

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A+++   +     +PNVVTY I++ G    GQ+ + + +   M      PN   F+ L
Sbjct: 296 EEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSL 355

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           I  + +  + S   +L  KM +    P   + +I +  +  NE
Sbjct: 356 IHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNE 398


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 208/408 (50%), Gaps = 9/408 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   +  +L+ GL    R+  A   F         PD++T+ T+++GLCR      A ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE---LLLQMKDKNIKPNVVTY 137
            +++      +G+   P+  TY ++IDG CK+G          LL +M +  I P  VT+
Sbjct: 214 AKDIK----AWGLA--PSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTF 267

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G+C   +   A R+F EM  QG+  +VVT+N ++  LC  GK++E  +L++ M  
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ P+  T+  +L GFC  G +  A +    M     +  V  Y+ILI+GY +  ++E 
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMED 387

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A+++   M  KGI P+V  +N L  G         A  L DEM+  G+ AD  TY   I 
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC  G + +AV+L   +  +  E +   YN++I G C  G ++ A E+   +       
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           NVVTY++ I   C  G+MD+A DL  +M +  +VPN IT++ +  G +
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 188/382 (49%), Gaps = 9/382 (2%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           L+   +PD  TF ++I GLC   ++ +A  +   ++ +G  P V TY +L++G C+    
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242

Query: 75  IVALN---LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
               +   L +EM     E G+   P  VT+  +I+G CK      A  +  +MK + I 
Sbjct: 243 GNMYHVDMLLKEMV----EAGI--SPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIA 296

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
            +VVTY S+I G C      E  +L  EM D G+ PN +TF  ++   CK G M +A+  
Sbjct: 297 ASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDW 356

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           +D M +  V PD   Y  L+DG+   G++  A  +  +M   G    V +Y+ LI G+ +
Sbjct: 357 IDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           + +   A  L  EM  KGI+ DVV +N L   L    +V +A KL DEM   G+  +  T
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I G C  G I  A E+   +   +   ++  YN  I   C+ G+++ A +L   + 
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 372 CGVLVPNVVTYSIMIGGLCNDG 393
              LVPN +TY  +  G+   G
Sbjct: 537 DKCLVPNGITYETIKEGMMEKG 558



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 167/321 (52%), Gaps = 3/321 (0%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +P+  +  +++ G   AK  + A++ F   + + V P++ TFN ++  LC+ G++ +A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCL---TGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           +   +   G+ P   TYN+L+DG+C     G + H   L   M   G   T  ++ +LIN
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           GYCKN     A+ ++ EM  +GI   VV +N+L  GL    +VE   KL +EM+  G++ 
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  T+   + G CK G + +A +    +     E D+  Y  LIDG  + G++E A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            ++    + PNV TY+ +I G    G    A  L  +M+E  +  +V+T+++LI      
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 428 NEPSKVIELLHKMKEINVMPD 448
            E  K ++LL +M E+ + P+
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPN 473



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 162/323 (50%), Gaps = 6/323 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + H  ++L  ++++  +P AVTF  LI G C  S    A  +F +++  G    V TY
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++GLC        + L EEM     + G+   PN +T+  ++ G CK+G +  A + 
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEME----DLGL--SPNEITFGCVLKGFCKKGMMADANDW 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M ++N++P+VV YT +I G+       +A  +   M  +G+ PNV T+N ++    +
Sbjct: 357 IDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    AS LLD M + G+  D  TYN L+   C  G V  A +L   M  +G +    +
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I G+C    I+ A  + + M     + +VV +N       +I +++ A  L +EM 
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 302 RNGVAADTWTYRTFIDGLCKNGY 324
              +  +  TY T  +G+ + GY
Sbjct: 537 DKCLVPNGITYETIKEGMMEKGY 559



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 192/424 (45%), Gaps = 42/424 (9%)

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           LV  L R S  + A + F       GE      P+T +   ++ GL     VD A++   
Sbjct: 125 LVLALARASQPLRAYDAFLLA----GESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFR 180

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN- 182
               + + P++ T+ +VI G C      +A  +  ++   G+ P+V T+N ++D  CK  
Sbjct: 181 SALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240

Query: 183 --GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G M     LL  M++ G+ P A T+  L++G+C       A  +F  M+  G   +V 
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300

Query: 241 SYSILINGYCKNKEIEGALSLYSE-----------------------------------M 265
           +Y+ LI+G C   ++E  + L  E                                   M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             + ++PDVVI+  L  G   + ++E A  + + M + G++ +  TY   I G  ++G  
Sbjct: 361 TERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A  L   ++    E D+  YN LI  LC  G +  A++L   +    L PN +TY+ +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G C+ G +  A ++   ME+     NV+T+++ I+ F +I +  +  +LL++M +  +
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540

Query: 446 MPDA 449
           +P+ 
Sbjct: 541 VPNG 544



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 9/300 (3%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +P+  + N ++  L    ++D A +     ++  V PD +T+NT++ G C  G++  A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY------SEMLSKGIKPDVVIHNT 279
           +   +++ G   +V +Y+ LI+GYCK     GA ++Y       EM+  GI P  V    
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G  +      A ++F+EM++ G+AA   TY + I GLC  G + E V+L   +  L 
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              +   +  ++ G CK G +  A +    +    + P+VV Y+I+I G    G+M+ A 
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAM 389

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +   M +  + PNV T++ LI GF R  +      LL +MKE  +  D    ++++  L
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 6/212 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V +T LI G     ++ +A A+   +   G  P+V TY  L+ G  R+     A  L
Sbjct: 367 PDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM     E G+  E + VTY  +I  LC +G V KA +LL +M +  ++PN +TY ++
Sbjct: 427 LDEMK----EKGI--EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I+GFC   +   A  +   M     + NVVT+NV +   C+ GKMDEA+ LL+ M+   +
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
            P+  TY T+ +G    G     +   VS  S
Sbjct: 541 VPNGITYETIKEGMMEKGYTPDIRGCTVSQAS 572



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 6/183 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V   + K   +P+  T+  LI G         A+ L  +++  G E DV T
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+  LC       A+ L +EM+    E G+  EPN +TY TII G C +G +  A E
Sbjct: 442 YNVLIGALCCKGEVRKAVKLLDEMS----EVGL--EPNHLTYNTIIQGFCDKGNIKSAYE 495

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M+    + NVVTY   I+ FC     +EA  L  EM+D+ + PN +T+  I + + 
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555

Query: 181 KNG 183
           + G
Sbjct: 556 EKG 558



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 3/134 (2%)

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+L+ GL  + R+++A + FRS     + P++ T++ +I GLC  GQ+ KA D+  D++ 
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIE---LLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             + P+V T++ LI G+ +      +     LL +M E  + P A    ++++   KN  
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 465 SLNSLPSFTVHEQQ 478
           +  ++  F   +QQ
Sbjct: 280 TAAAVRVFEEMKQQ 293



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 29/137 (21%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC------------ 69
           D VT+  LI  LC +  + +A  L  ++   G EP+  TY T++ G C            
Sbjct: 438 DVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIR 497

Query: 70  ------RTSHTIVALNLF-------EEMANGNGEFGVVCE----PNTVTYTTIIDGLCKE 112
                 R    +V  N+F        +M   N     + +    PN +TY TI +G+ ++
Sbjct: 498 TRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEK 557

Query: 113 GFVDKAKELLLQMKDKN 129
           G+    +   +    +N
Sbjct: 558 GYTPDIRGCTVSQASEN 574


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 208/400 (52%), Gaps = 9/400 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+ ++F  +IK LC    +  A  +F  +    C PD +TY TL++GLC+      A+ 
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +EM +        C P+ V Y  +IDGLCK+G + +  +L+  M  K   PN VTY +
Sbjct: 244 LLDEMQSEG------CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C     ++A  L   M+     PN VT+  +++ L K  +  +A RLL  M + G
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
              +   Y+ L+ G    G+   A  L+  M   GCK  +  YS+L++G C+  +   A 
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + + M++ G  P+   +++L  G F+    E A +++ EM + G + + + Y   IDGL
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC---GVLV 376
           C  G + EA+ ++  +  +  + D  AY+S+I GLC  G ++ AL+L+  + C       
Sbjct: 478 CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ 537

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           P+VVTY+I++ GLC    + +A DL   M +    P+VIT
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 216/420 (51%), Gaps = 9/420 (2%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+  ++  ++  LC+      A+ +F  M          C P+  TY T++DGLCKE  +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK------CLPDGYTYCTLMDGLCKEERI 238

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A  LL +M+ +   P+ V Y  +I G C   D     +L   M  +G  PN VT+N +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC  GK+D+A  LL+ M+     P+  TY TL++G     R   A  L  SME  G 
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                 YS+LI+G  K  + E A+SL+ +M  KG KP++V+++ L  GL    +   A +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + + M  +G   + +TY + + G  K G   EAV+++  +    C  +   Y+ LIDGLC
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM---EENAVVP 412
             GR++ A+ ++  +    + P+ V YS +I GLC  G MD A  L+ +M   EE    P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           +V+T+++L+ G     + S+ ++LL+ M +    PD    +  ++ L++   S +   SF
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 216/439 (49%), Gaps = 65/439 (14%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+ +L+ GLC E RI EA  L  +++  GC P    Y  L++GLC+         L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M      F   C PN VTY T+I GLC +G +DKA  LL +M      PN VTY ++
Sbjct: 280 VDNM------FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333

Query: 141 IRGFCYAKDWNEAKR-----------------------------------LFIEMMDQGV 165
           I G    +   +A R                                   L+ +M ++G 
Sbjct: 334 INGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +PN+V ++V++D LC+ GK +EA  +L+ MI  G  P+A+TY++L+ GF  TG    A +
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           ++  M+  GC    F YS+LI+G C    ++ A+ ++S+ML+ GIKPD V ++++  GL 
Sbjct: 454 VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513

Query: 286 EIHQVERAFKLFDEM---QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
            I  ++ A KL+ EM   +      D  TY   +DGLC    I  AV+L +++    C+ 
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP 573

Query: 343 DIRAYNSLIDGL------CKSGRL---EIALELFR----SLPCGV--------LVPNVVT 381
           D+   N+ ++ L      C  GR    E+ + L +    S  C +        L P   T
Sbjct: 574 DVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTST 633

Query: 382 YSIMIGGLCNDGQMDKARD 400
           +++++  +C   +++ A D
Sbjct: 634 WAMIVREICKPKKINAAID 652



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 32/247 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +    +L R++ S   P+A T++SL+KG        EA  ++ ++   GC  + F Y
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA--- 118
           + L++GLC       A+ ++ +M        +  +P+TV Y++II GLC  G +D A   
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKM------LTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524

Query: 119 -KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
             E+L Q + K+ +P+VVTY  ++ G C  KD + A  L   M+D+G  P+V+T N  ++
Sbjct: 525 YHEMLCQEEPKS-QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583

Query: 178 EL------CKNG---------------KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            L      C  G               ++  A  ++++M+   + P   T+  ++   C 
Sbjct: 584 TLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643

Query: 217 TGRVNHA 223
             ++N A
Sbjct: 644 PKKINAA 650



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 112/244 (45%), Gaps = 7/244 (2%)

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFD- 298
           S+ ++   Y K    + A+ L+  M+ +   K  V   N++   +       R  + +D 
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 299 ----EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                M  N ++ +  ++   I  LCK  ++  A+E+F  +   KC  D   Y +L+DGL
Sbjct: 174 VVNSNMNMN-ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGL 232

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK  R++ A+ L   +      P+ V Y+++I GLC  G + +   L  +M     VPN 
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
           +T++ LI G     +  K + LL +M     +P+      +++ L K   + +++   + 
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352

Query: 475 HEQQ 478
            E++
Sbjct: 353 MEER 356



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 27/193 (13%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPD 57
           +GRV    +V  ++L     PD V ++S+IKGLC    +  A  L+ ++        +PD
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC-KEGFVD 116
           V TY  L++GLC       A++L   M +        C+P+ +T  T ++ L  K    D
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRG------CDPDVITCNTFLNTLSEKSNSCD 593

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE-MMDQGVQPNVVTFNVI 175
           K +  L ++  + +K   V+      G C            +E M+ + + P   T+ +I
Sbjct: 594 KGRSFLEELVVRLLKRQRVS------GAC----------TIVEVMLGKYLAPKTSTWAMI 637

Query: 176 MDELCKNGKMDEA 188
           + E+CK  K++ A
Sbjct: 638 VREICKPKKINAA 650


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 220/432 (50%), Gaps = 24/432 (5%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+ D V+F  L+  LC     + +A L  +LR +G  P   +   +   LCR      A+
Sbjct: 194 FSSDPVSFDLLL--LC-----LPSAPLLLRLRQYGISPSPESCNAV---LCRLP-LDEAV 242

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF+E+           E NT +Y  ++  LC  G +  A +L  +M      P+VVTY 
Sbjct: 243 QLFQELP----------EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYG 289

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            ++ G+C   +   A +L  EM  +G++ N V +  ++  LC  G++ +A R+++ M+ H
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV  DA  + T++ GFC  G +  A+  F  M+  G      +Y+ LING C+  E++ A
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             +  EM  KG+  D V +  L  G  ++ ++  AF + ++M +  V  +  TY    DG
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G +  A EL H +     E +I  YNSLI+GLCK+G LE A+     +    L P+
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V TY+ +IG LC   ++D+A  L  +M +  + P ++T+++L+ GF           LL 
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589

Query: 439 KMKEINVMPDAS 450
            M E N+ P+ +
Sbjct: 590 WMLEKNIHPNTT 601



 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 227/473 (47%), Gaps = 33/473 (6%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           ++  L+K LC   RI +A  LF ++      PDV TY  +V+G C  S    A+ L  EM
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 85  ANGNGEF---------GVVCEPNTVT--------------------YTTIIDGLCKEGFV 115
           A    E           ++C+   V+                    +TT++ G C++G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A+    +M+ + +  + VTYT++I G C A +  EA+R+  EM D+G+  + VT+ V+
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D  CK GKM EA  + + M+Q  V P+  TY  L DG C  G V  A EL   M S G 
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  +F+Y+ LING CK   +E A+    +M   G+KPDV  + T+   L +  +++RA  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  EM   G+     TY   ++G C +G +     L   +       +   YNSL+   C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
               ++   E+++ +    +VPN  TY+I+I G C    M +A     +M E        
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           +++ LIR   +  + ++   L  KM++  +  +  + +  +D L+ NE +L S
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID-LSFNEDNLES 723



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 170/351 (48%), Gaps = 6/351 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K     D VT+T+LI GLC    + EA  +  ++   G + D  TYT L++G C+     
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  +  +M            PN VTYT + DGLCK+G V  A ELL +M  K ++ N+ 
Sbjct: 443 EAFLVHNKMVQKR------VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY S+I G C A +  +A R  I+M + G++P+V T+  I+  LC++ ++D A  LL  M
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +  G++P   TYN L++GFC++GRV   K L   M          +Y+ L+  YC  K +
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +    +Y  MLS+ + P+   +N L  G  +   ++ A     EM   G      +Y   
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           I  L K     EA  LF  +R  +   +   YN  ID       LE  L L
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLAL 727



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 152/300 (50%), Gaps = 6/300 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F+V  ++++   TP+ VT+T+L  GLC +  +  A  L  ++   G E ++FT
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+NGLC+  +   A+    +M     E G+  +P+  TYTTII  LC+   +D+A  
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDM----DEAGL--KPDVYTYTTIIGALCQSKELDRAHS 551

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M DK IKP +VTY  ++ GFC +      KRL   M+++ + PN  T+N +M + C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
               M   + +   M+   V P+  TYN L+ G C    +  A      M   G + T  
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LI    K K+   A  L+ +M  + +  +  ++N      F    +E    L DE+
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 166/343 (48%), Gaps = 11/343 (3%)

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LLL+++   I P+  +  +V+   C     +EA +LF E+ ++    N  ++N+++  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELPEK----NTCSYNILLKALC 264

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G++ +A +L D M      PD  TY  ++ G+C    +  A +L   M + G +    
Sbjct: 265 TAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I   C   ++  A+ +  +M+  G+  D  +  T+  G      +  A   FDEM
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           Q+ G+AAD  TY   I+GLC+ G + EA  +   +     + D   Y  LIDG CK G++
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  +   +    + PNVVTY+ +  GLC  G +  A +L  +M    +  N+ T++ L
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           I G  +     + +  +  M E  + PD    + ++  L +++
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 226/448 (50%), Gaps = 28/448 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    V  +++     P+ VT+T++I  LC E  I +A  LF  ++  G +P+ +TY
Sbjct: 200 GTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTY 259

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C+      A+ L++E+            PN V +TT+IDG CK     +AK +
Sbjct: 260 NVLMSGHCQRDDVNSAVVLYQELLKSG------LNPNAVIFTTLIDGFCKAKRFSEAKGM 313

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L+M    + P V  Y S++ G   + +  EA  L+ EM   G+ P+  T ++++  LC 
Sbjct: 314 FLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCD 373

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+M  A R L  + + GV  +A  YN L+D +C  G +  A      M  +G +  V S
Sbjct: 374 GGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVS 433

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI+G+ K  +++ A+++Y+EM++KGI+P+VV +  L  G  +   ++ AF+L  EM 
Sbjct: 434 YSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMI 493

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY--NSLIDGLCKSGR 359
            NG++ +  T    +DGLC+   + EAV        LKC  DI +   N  I+  C    
Sbjct: 494 ENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCS-DIHSVFSNFTIEEEC---- 548

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
                          L+PN V Y  +I GL  DGQ  +A  LF  M ++ ++P+  T+ +
Sbjct: 549 ---------------LIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTL 593

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMP 447
           LIRG   +      + L   M +I V P
Sbjct: 594 LIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 137/423 (32%), Positives = 220/423 (52%), Gaps = 9/423 (2%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           L S  T  A     L+  L     + EA  +F +LR     P +     +++GL +    
Sbjct: 111 LSSTSTTPAPALGVLVIALSQMGLLDEALYVFRRLRTL---PALPACNAVLDGLVKARRP 167

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A  LF+EM       G+V  P+ VTY T+I+    +G V KA+E+  QM  + I PNV
Sbjct: 168 GCAWELFDEML----RRGLV--PSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNV 221

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           VTYT++I   C      +A+RLF  M + G+QPN  T+NV+M   C+   ++ A  L   
Sbjct: 222 VTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQE 281

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           +++ G+ P+A  + TL+DGFC   R + AK +F+ M   G   TV  Y+ L++G  ++  
Sbjct: 282 LLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGN 341

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            + AL+LY EM   G+ PD    + +  GL +  Q+  A +    +Q +GV  +   Y  
Sbjct: 342 AQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNA 401

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            ID  C+ G + EA+     +  +  E ++ +Y+SLIDG  K G+++IA+ ++  +    
Sbjct: 402 LIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKG 461

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + PNVVTY+ +I G   +G +D A  L  +M EN + PN IT  +L+ G  R N   + +
Sbjct: 462 IEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAV 521

Query: 435 ELL 437
             +
Sbjct: 522 RFV 524



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 183/365 (50%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P       ++DGL K      A EL  +M  + + P+VVTY ++I    +     +A+ +
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           + +M+ Q + PNVVT+  ++  LC+ G + +A RL D M + G++P+ +TYN L+ G C 
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
              VN A  L+  +   G       ++ LI+G+CK K    A  ++ EM   G+ P V +
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L  G F     + A  L+ EM R G+  D +T    + GLC  G +  A      ++
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ 388

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 +  AYN+LID  C+ G LE AL     +    + PNVV+YS +I G    G+M 
Sbjct: 389 EDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQ 448

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  ++ +M    + PNV+T+  LI G  +         L  +M E  + P+A  VS++V
Sbjct: 449 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLV 508

Query: 457 DLLAK 461
           D L +
Sbjct: 509 DGLCR 513



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 135/353 (38%), Gaps = 116/353 (32%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP------- 56
           V+   V+   +LKS   P+AV FT+LI G C   R  EA  +F ++  FG  P       
Sbjct: 272 VNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNS 331

Query: 57  ----------------------------DVFTYTTLVNGLCRTSHTIVA----------- 77
                                       D FT + +V GLC      VA           
Sbjct: 332 LMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDG 391

Query: 78  ------------------LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
                              NL E +A       V  EPN V+Y+++IDG  K G +  A 
Sbjct: 392 VNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAM 451

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  +M  K I+PNVVTYT++I G       + A RL  EM++ G+ PN +T +V++D L
Sbjct: 452 AIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGL 511

Query: 180 CK----------------------------------------------------NGKMDE 187
           C+                                                    +G+  E
Sbjct: 512 CRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCE 571

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           A +L   M + G+ PD+FTY  L+ G C+ G V +A  L+  M  +G K T +
Sbjct: 572 AGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTRY 624



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 23/222 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +        R+ +    P+ V+++SLI G     ++  A A++T++   G EP+V T
Sbjct: 409 IGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVT 468

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G  +      A  L +EM     E G+   PN +T + ++DGLC+E  V +A  
Sbjct: 469 YTALIHGHAKNGGIDAAFRLHKEMI----ENGI--SPNAITVSVLVDGLCRENRVQEAVR 522

Query: 121 LLLQ-----------------MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
            +++                 ++++ + PN V Y ++I G        EA +LF  M   
Sbjct: 523 FVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKS 582

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
           G+ P+  T+ +++   C  G +  A  L   M++ GV+P  +
Sbjct: 583 GMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTRY 624


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 226/462 (48%), Gaps = 7/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   +     +      PD V++TS+I  LC   R+ EA  LF ++      P  + Y
Sbjct: 266 GNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAY 325

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ G         A  L +++     E G  C P+ V++ +I+  L K+  VD+A  L
Sbjct: 326 NTMIMGYGSAGQFENAYKLLDQLK----ERG--CIPSVVSFNSILTCLGKKRKVDEALTL 379

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              MK K+ +PN  TY  +I   C A    EA  +  EM   G+ PN++T N+++D LCK
Sbjct: 380 FEAMK-KDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCK 438

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K + A  + +   Q G  P++ TY +L+DG    G V+ A  LF +M   G       
Sbjct: 439 AKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVV 498

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI  +  +   E    ++ EM  +G +PD+ + NT    +F+   VE+   +F++++
Sbjct: 499 YTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIK 558

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  +Y   I GL K G   E   +FH ++      D RAYN+++DG CKSG+L+
Sbjct: 559 GYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLD 618

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A E+   +    + P V TY  +I GL    ++D+A  LF + +   +  NVI +  LI
Sbjct: 619 KAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLI 678

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            GF ++    +   +L +M +  + P+    + ++D L K E
Sbjct: 679 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAE 720



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 226/466 (48%), Gaps = 44/466 (9%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           +K    P++ T+  +I  LC   ++ EA  +  ++   G  P++ T   +V+ LC+    
Sbjct: 383 MKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKF 442

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A  +FE  A+  G     C PN+VTY ++IDGL K+G VD A  L   M D     N 
Sbjct: 443 EPAYEMFE-TASQRG-----CNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD----------------- 177
           V YTS+IR F       +  ++F EM  +G QP++   N  MD                 
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556

Query: 178 ------------------ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
                              L K G+  E S +   M Q G   DA  YN ++DGFC +G+
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK 616

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++ A E+   M+      TV +Y  +I+G  K   ++ A  L+ E  SKGI+ +V+++++
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G  ++ +++ A+ + +EM + G+  + +T+ + +D L K   I EA+  F +++ +K
Sbjct: 677 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 736

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C  +   Y+ LI+GLC+  +   A   ++ +    LVPNVVTY+ MI GL   G +  A 
Sbjct: 737 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDAC 796

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
            LF   + N   P+  +F+ LI G    N   + IE  H  +E  +
Sbjct: 797 SLFERFKANGGTPDAASFNALIEGMSHAN---RAIEAYHVFEETRL 839



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 224/460 (48%), Gaps = 7/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S    + G++      P A  + ++I G  +  +   A  L  +L+  GC P V ++
Sbjct: 301 GRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSF 360

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++  L +      AL LFE M           EPN+ TY  IID LC  G V++A  +
Sbjct: 361 NSILTCLGKKRKVDEALTLFEAMKKD-------AEPNSSTYNIIIDMLCMAGKVEEAYMI 413

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M+   + PN++T   ++   C AK +  A  +F     +G  PN VT+  ++D L K
Sbjct: 414 RDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGK 473

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D+A RL + M+  G   +   Y +L+  F + GR     ++F  M   GC+  +  
Sbjct: 474 KGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTL 533

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            +  ++   K  ++E   +++ ++   G  PDV  ++ L  GL +  Q      +F  M+
Sbjct: 534 LNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMK 593

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G A D   Y   +DG CK+G + +A E+   +++ +    +  Y S+IDGL K  RL+
Sbjct: 594 QQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLD 653

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF       +  NV+ YS +I G    G++D+A  +  +M +  + PNV T++ L+
Sbjct: 654 EAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 713

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              ++  E ++ +     MKE+   P+    SI+++ L +
Sbjct: 714 DALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCR 753



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 187/362 (51%), Gaps = 6/362 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +   + +    PD     + +  +     + +  A+F  ++ +G  PDV +Y
Sbjct: 510 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 569

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +        ++F  M      F +    +   Y  ++DG CK G +DKA E+
Sbjct: 570 SILIHGLTKAGQARETSSIFHAMKQQG--FAL----DARAYNAVVDGFCKSGKLDKAYEV 623

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MK K + P V TY S+I G       +EA  LF E   +G++ NV+ ++ ++D   K
Sbjct: 624 LEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGK 683

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DEA  +L+ M++ G+ P+ +T+N+L+D       +N A   F SM+ M C    ++
Sbjct: 684 VGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYT 743

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSILING C+ ++   A   + EM  +G+ P+VV + T+  GL ++  +  A  LF+  +
Sbjct: 744 YSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFK 803

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   D  ++   I+G+      +EA  +F   R+  C  +++A  SL+D L K+  LE
Sbjct: 804 ANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLE 863

Query: 362 IA 363
            A
Sbjct: 864 QA 865



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 207/450 (46%), Gaps = 7/450 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+  L    R+ +A  +   +R     P    YT L+  +        AL L  +M    
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
            E GV        +TT++  L +EG V+ A  L+ ++K   ++P++V Y   I  F  A 
Sbjct: 213 YEVGVPL------FTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 266

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
           + + A + F E+  QG++P+ V++  ++  LCK G++ EA  L   M      P A+ YN
Sbjct: 267 NVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYN 326

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           T++ G+   G+  +A +L   ++  GC  +V S++ ++    K ++++ AL+L+ E + K
Sbjct: 327 TMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKK 385

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
             +P+   +N +   L    +VE A+ + DEM+  G+  +  T    +D LCK      A
Sbjct: 386 DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPA 445

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            E+F T     C  +   Y SLIDGL K G ++ A  LF ++       N V Y+ +I  
Sbjct: 446 YEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRN 505

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               G+ +    +F +M      P++   +  +    +  +  K   +   +K    +PD
Sbjct: 506 FFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPD 565

Query: 449 ASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
               SI++  L K   +  +   F   +QQ
Sbjct: 566 VRSYSILIHGLTKAGQARETSSIFHAMKQQ 595



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 167/354 (47%), Gaps = 8/354 (2%)

Query: 72  SHTIVAL-NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
           SH + A+  + EEM+     +GV   PN      ++  L +   +D A+ ++  M+    
Sbjct: 125 SHDLAAMEKVLEEMSVLG--YGV---PNPAC-ADLVSALVRTRRLDDAERVIAAMRRLKF 178

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +P    YT +I     A+    A  L  +M + G +  V  F  ++  L + G+++ A  
Sbjct: 179 RPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALA 238

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L+D +    + PD   YN  +D F   G V+ A + F  ++S G K    SY+ +I   C
Sbjct: 239 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLC 298

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K   +  A  L+ +M ++   P    +NT+ +G     Q E A+KL D+++  G      
Sbjct: 299 KAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVV 358

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           ++ + +  L K   + EA+ LF  ++    E +   YN +ID LC +G++E A  +   +
Sbjct: 359 SFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEM 417

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
               L PN++T +IM+  LC   + + A ++F    +    PN +T+  LI G 
Sbjct: 418 EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 6/189 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   +++L  ++K   TP+  T+ SL+  L     I EA   F  ++   C P+ +T
Sbjct: 684 VGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYT 743

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+ L+NGLCR      A   ++EM       G+V  PN VTYTT+I GL K G +  A  
Sbjct: 744 YSILINGLCRVQKYNKAFVFWQEMQKQ----GLV--PNVVTYTTMIAGLAKVGNITDACS 797

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  + K     P+  ++ ++I G  +A    EA  +F E   +G + NV     ++D L 
Sbjct: 798 LFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALN 857

Query: 181 KNGKMDEAS 189
           K   +++A+
Sbjct: 858 KAECLEQAA 866



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 7/265 (2%)

Query: 227 FVSMESMGCKHTVFSYSI-------LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
             +ME +  + +V  Y +       L++   + + ++ A  + + M     +P    +  
Sbjct: 128 LAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTV 187

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   + E  Q ERA +L  +MQ  G       + T +  L + G +  A+ L   ++   
Sbjct: 188 LIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSC 247

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            E DI  YN  ID   K+G +++A + F  L    L P+ V+Y+ MI  LC  G++ +A 
Sbjct: 248 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAE 307

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +LF  ME    VP    ++ +I G+    +     +LL ++KE   +P     + ++  L
Sbjct: 308 ELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCL 367

Query: 460 AKNEISLNSLPSFTVHEQQEEVDES 484
            K      +L  F   ++  E + S
Sbjct: 368 GKKRKVDEALTLFEAMKKDAEPNSS 392



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 33/164 (20%), Positives = 71/164 (43%)

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
           F  H +    K+ +EM   G           +  L +   + +A  +   +R LK     
Sbjct: 123 FLSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAF 182

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            AY  LI  + ++ + E ALEL R +        V  ++ ++  L  +G+++ A  L  +
Sbjct: 183 SAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDE 242

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           ++ + + P+++ +++ I  F +        +  H++K   + PD
Sbjct: 243 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPD 286


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 232/440 (52%), Gaps = 18/440 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +  ++   C  PD  ++ +++KGLC + R  +A  L   +    C PD  T
Sbjct: 286 LGRVEEALHLFDQM--PC-KPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVT 342

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T+++ LC       A+ + E+M     ++G  C+P+  TY+ +++ L + G VD A E
Sbjct: 343 FNTVISYLCHRGLVDCAMEVVEQMP----KYG--CKPDNFTYSALVNALSERGCVDDALE 396

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  +     KPN V Y SV++G C A  W++  +L  EM+   +  + VTF +I+D LC
Sbjct: 397 LLRTIP---WKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLC 453

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G +D  + +L  M + G  PD   YN+L++GF   G V+ A ELF   ++M CK  V 
Sbjct: 454 QKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELF---KNMSCKRNVV 510

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++ G C+ ++ E A  L +EM+     P+ V  +TL   L +   VE A ++F++M
Sbjct: 511 TYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKM 570

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +     +   Y T I+GL     + +A++L +    + C+ D   Y++ + GLC++ R 
Sbjct: 571 PKYNCMPNVIIYSTLINGLSDQECVDDALKLLND---MPCKPDTICYSAALKGLCRAERW 627

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A EL   +     +P+ VT+SI+I  LC+ G ++ A ++   M +   +PNV  +  L
Sbjct: 628 EDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSL 687

Query: 421 IRGFIRINEPSKVIELLHKM 440
           I GF         ++LL  M
Sbjct: 688 INGFAEQYRAEDALQLLRNM 707



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 238/500 (47%), Gaps = 48/500 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLC-AESRIMEAAALFTKLRVFGCEPDVFT 60
           GR+     VLG   ++  T DAVT  +L+ G C A  R+ +A  +   L + G   DV T
Sbjct: 116 GRLDDAERVLGASERA-GTADAVTRNTLVAGYCRAGGRLADAERMLASLALSG-SADVVT 173

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVV----------- 94
           Y TLV G CR      A  L  +M                  N E+              
Sbjct: 174 YNTLVAGYCREGRLNDARRLVADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSG 233

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C PN +T+  II  LC+ G  D+A  +L QM        V+ Y  +I          EA 
Sbjct: 234 CPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEAL 293

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            LF +M     +P++ ++N +M  LC++G+ ++A  L+  M++    PD  T+NT++   
Sbjct: 294 HLFDQM---PCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYL 350

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G V+ A E+   M   GCK   F+YS L+N   +   ++ AL L   + +   KP+ 
Sbjct: 351 CHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALEL---LRTIPWKPNT 407

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V + ++  GL    + +   KL  EM RN +  D  T+   ID LC+ G +    E+   
Sbjct: 408 VCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLRE 467

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C  DI  YNSLI+G  ++G ++ ALELF+++ C     NVVTY+ M+ GLC   Q
Sbjct: 468 MTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKR---NVVTYNYMLKGLCRAEQ 524

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLI-----RGFIRINEPSKVIELLHKMKEINVMPDA 449
            + A  L  +M ++  +PN +TF  LI     +GF+        IE+  KM + N MP+ 
Sbjct: 525 WEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVEC-----AIEVFEKMPKYNCMPNV 579

Query: 450 SIVSIVVDLLAKNEISLNSL 469
            I S +++ L+  E   ++L
Sbjct: 580 IIYSTLINGLSDQECVDDAL 599



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 220/483 (45%), Gaps = 48/483 (9%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G ++ G + K C  PD VTF ++I  LC    +  A  +  ++  +GC+PD FTY+ LVN
Sbjct: 325 GTLIAGMVRKDC-PPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVN 383

Query: 67  --------------------------------GLCRTSHTIVALNLFEEMANGNGEFGVV 94
                                           GLCR         L  EM          
Sbjct: 384 ALSERGCVDDALELLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNL--- 440

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
              + VT+  IID LC++G VD   E+L +M      P+++ Y S+I GF      ++A 
Sbjct: 441 ---DEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDAL 497

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            LF  M     + NVVT+N ++  LC+  + ++A +L+  M++    P+  T++TL+   
Sbjct: 498 ELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYL 554

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G V  A E+F  M    C   V  YS LING    + ++ AL L ++M     KPD 
Sbjct: 555 CQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCKPDT 611

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + ++    GL    + E A +L  EM R     D  T+   I+ LC  G++  A E+   
Sbjct: 612 ICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSEL 671

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +   +C  ++  Y+SLI+G  +  R E AL+L R++PC    P+ + YS  + GLC   +
Sbjct: 672 MLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMPCE---PDTICYSAALKGLCRAKR 728

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
            + AR+L  +M       +  TF MLI    +        E+  +M      P+  I S 
Sbjct: 729 WEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSS 788

Query: 455 VVD 457
           +V+
Sbjct: 789 LVN 791



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 209/422 (49%), Gaps = 20/422 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV-ALN 79
           P AV  T LIK LCA  R+ +A  +       G   D  T  TLV G CR    +  A  
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGASERAG-TADAVTRNTLVAGYCRAGGRLADAER 158

Query: 80  LFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +   +A +G+ +         VTY T++ G C+EG ++ A+ L+  M      PN  T +
Sbjct: 159 MLASLALSGSAD--------VVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNS 207

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++++G C  K+W++A+ L  EM+  G  PN +TF +I+  LC+NG  D A  +LD M + 
Sbjct: 208 TLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKC 267

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
                   YN ++      GRV  A  LF   + M CK  +FSY+ ++ G C++   E A
Sbjct: 268 RCTRGVIVYNEIISCLAELGRVEEALHLF---DQMPCKPDIFSYNTVMKGLCRDGRWEDA 324

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            +L + M+ K   PD V  NT+   L     V+ A ++ ++M + G   D +TY   ++ 
Sbjct: 325 GTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNA 384

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L + G + +A+EL   LR +  + +   Y S++ GLC++ R +   +L   +    L  +
Sbjct: 385 LSERGCVDDALEL---LRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLD 441

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VT+ ++I  LC  G +D   ++  +M +    P++I ++ LI GF         +EL  
Sbjct: 442 EVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFK 501

Query: 439 KM 440
            M
Sbjct: 502 NM 503



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 223/445 (50%), Gaps = 18/445 (4%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P++ T ++L+KGLC+     +A  L +++   GC P+  T+  +++ LC+      A+
Sbjct: 199 FAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAM 258

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            + ++M+      GV      + Y  II  L + G V++A  L  QM     KP++ +Y 
Sbjct: 259 GVLDQMSKCRCTRGV------IVYNEIISCLAELGRVEEALHLFDQMP---CKPDIFSYN 309

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +V++G C    W +A  L   M+ +   P+ VTFN ++  LC  G +D A  +++ M ++
Sbjct: 310 TVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKY 369

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G +PD FTY+ L++     G V+ A EL   + ++  K     Y  ++ G C+    +  
Sbjct: 370 GCKPDNFTYSALVNALSERGCVDDALEL---LRTIPWKPNTVCYRSVLKGLCRADRWDDV 426

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L +EM+   +  D V    +   L +   V+   ++  EM + G + D   Y + I+G
Sbjct: 427 GKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLING 486

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             +NG + +A+ELF     + C+ ++  YN ++ GLC++ + E A +L   +     +PN
Sbjct: 487 FSENGSVDDALELFKN---MSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPN 543

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VT+S +I  LC  G ++ A ++F  M +   +PNVI +  LI G   +++   V + L 
Sbjct: 544 EVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLING---LSDQECVDDALK 600

Query: 439 KMKEINVMPDASIVSIVVDLLAKNE 463
            + ++   PD    S  +  L + E
Sbjct: 601 LLNDMPCKPDTICYSAALKGLCRAE 625



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 183/370 (49%), Gaps = 15/370 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V +G  VL  + K   +PD + + SLI G      + +A  LF  +    C+ +V TY
Sbjct: 456 GLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTY 512

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ GLCR      A  L  EM          C PN VT++T+I  LC++GFV+ A E+
Sbjct: 513 NYMLKGLCRAEQWEDAGKLVAEMVKDE------CLPNEVTFSTLISYLCQKGFVECAIEV 566

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M   N  PNV+ Y+++I G    +  ++A +L   + D   +P+ + ++  +  LC+
Sbjct: 567 FEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKL---LNDMPCKPDTICYSAALKGLCR 623

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             + ++A  L+  MI+    PD  T++ L++  C  G +  A E+   M    C   VF 
Sbjct: 624 AERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFI 683

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LING+ +    E AL L   M     +PD + ++    GL    + E A +L  EM 
Sbjct: 684 YSSLINGFAEQYRAEDALQLLRNM---PCEPDTICYSAALKGLCRAKRWEDARELIAEMF 740

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R     D  T+   I  LC+NG +  A E+F  + +  C  + + ++SL++G  +  R++
Sbjct: 741 RKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVD 800

Query: 362 IALELFRSLP 371
             L+L  S+P
Sbjct: 801 EGLKLLSSMP 810



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 178/384 (46%), Gaps = 15/384 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VTF  +I  LC +  +   A +  ++  FGC PD+  Y +L+NG         AL LF
Sbjct: 441 DEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELF 500

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + M+         C+ N VTY  ++ GLC+    + A +L+ +M      PN VT++++I
Sbjct: 501 KNMS---------CKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLI 551

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C       A  +F +M      PNV+ ++ +++ L     +D+A +LL+ M     +
Sbjct: 552 SYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCK 608

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD   Y+  L G C   R   A EL + M    C     ++SILIN  C    +E A  +
Sbjct: 609 PDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEV 668

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              ML     P+V I+++L  G  E ++ E A +L   M       DT  Y   + GLC+
Sbjct: 669 SELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMP---CEPDTICYSAALKGLCR 725

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
                +A EL   +   +C  D   ++ LI  LC++G +++A E+F  +      PN   
Sbjct: 726 AKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKI 785

Query: 382 YSIMIGGLCNDGQMDKARDLFLDM 405
           +S ++ G     ++D+   L   M
Sbjct: 786 HSSLVNGYSEQRRVDEGLKLLSSM 809



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 151/305 (49%), Gaps = 9/305 (2%)

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
           +E M    +P  V   +++ +LC  G++D+A R+L    + G   DA T NTL+ G+C  
Sbjct: 91  VESMRDPERPAAVPCTLLIKKLCAAGRLDDAERVLGASERAGT-ADAVTRNTLVAGYCRA 149

Query: 218 -GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR+  A+ +  S+   G    V +Y+ L+ GYC+   +  A  L ++M      P+   
Sbjct: 150 GGRLADAERMLASLALSG-SADVVTYNTLVAGYCREGRLNDARRLVADM---PFAPNSYT 205

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           ++TL  GL    + + A +L  EM R+G   +  T+   I  LC+NG    A+ +   + 
Sbjct: 206 NSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMS 265

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +C   +  YN +I  L + GR+E AL LF  +PC    P++ +Y+ ++ GLC DG+ +
Sbjct: 266 KCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRWE 322

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  L   M      P+ +TF+ +I            +E++ +M +    PD    S +V
Sbjct: 323 DAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALV 382

Query: 457 DLLAK 461
           + L++
Sbjct: 383 NALSE 387


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 198/381 (51%), Gaps = 7/381 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++      L  +++  F PD  T T ++  LC    +  A   F K+   G +P++  +
Sbjct: 254 GKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINF 313

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++GLC+      A  + EEM   NG      +PN  T+T +IDGLCK G+ +KA  L
Sbjct: 314 TSLIDGLCKKGSIKQAFEMLEEMVR-NG-----WKPNVYTHTALIDGLCKRGWTEKAFRL 367

Query: 122 LLQMKDKNI-KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L++   +I KPNV TYTS+I G+C     N A+ LF  M +QG+ PNV T+  +++  C
Sbjct: 368 FLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 427

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G  D A  L++LM   G RP+ +TYN ++D  C   R   A EL     S G +    
Sbjct: 428 KAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGV 487

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILI   CK  +I+ AL+ +  M   G + D+ ++N L        +++ + +LF  +
Sbjct: 488 TYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 547

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     TY + I G CK G    A++ FH ++   C  D   Y SLI GLCK   +
Sbjct: 548 VSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 607

Query: 361 EIALELFRSLPCGVLVPNVVT 381
           + A +L+ ++    L P  VT
Sbjct: 608 DEACKLYEAMIDRGLSPPEVT 628



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 228/465 (49%), Gaps = 8/465 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR++    ++  +     +P ++T   +++       I  A  +F ++ V G  PD  +
Sbjct: 183 IGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSS 242

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  +V G  R      A    +   +G  + G +  P+  T T I+  LC+ G V++A  
Sbjct: 243 FKLMVIGCFRDGKIQEA----DRWLSGMIQRGFI--PDNATCTLILSALCENGLVNRAIW 296

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D   KPN++ +TS+I G C      +A  +  EM+  G +PNV T   ++D LC
Sbjct: 297 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 356

Query: 181 KNGKMDEASRLLDLMIQHGV-RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           K G  ++A RL   +++  + +P+  TY +++ G+C   ++N A+ LF  M+  G    V
Sbjct: 357 KRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 416

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LING+CK    + A  L + M  +G +P++  +N +   L +  +   A++L ++
Sbjct: 417 NTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNK 476

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
               G+ AD  TY   I   CK   I +A+  F  +     E D+R  N LI   C+  +
Sbjct: 477 AFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 536

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ +  LF+ +    LVP   TY+ MI G C +G  D A   F +M+ +  VP+  T+  
Sbjct: 537 MKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGS 596

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVM-PDASIVSIVVDLLAKNE 463
           LI G  + +   +  +L   M +  +  P+ + V++  +   +N+
Sbjct: 597 LISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND 641



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 209/422 (49%), Gaps = 9/422 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD+ +F  ++ G   + +I EA    + +   G  PD  T T +++ LC       A+  
Sbjct: 238 PDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWY 297

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M     + G   +PN + +T++IDGLCK+G + +A E+L +M     KPNV T+T++
Sbjct: 298 FRKMI----DLGF--KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 351

Query: 141 IRGFCYAKDWNE-AKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           I G C  + W E A RLF++++   + +PNV T+  ++   CK  K++ A  L   M + 
Sbjct: 352 IDGLC-KRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 410

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P+  TY TL++G C  G  + A EL   M+  G +  +++Y+ +I+  CK      A
Sbjct: 411 GLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEA 470

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L ++  S G++ D V +  L     +   +++A   F  M + G  AD       I  
Sbjct: 471 YELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAA 530

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+   + E+  LF  +  L        Y S+I G CK G  ++AL+ F ++     VP+
Sbjct: 531 FCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPD 590

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
             TY  +I GLC    +D+A  L+  M +  + P  +T   L   + + N+ +  + +L 
Sbjct: 591 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLE 650

Query: 439 KM 440
            +
Sbjct: 651 PL 652



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 201/428 (46%), Gaps = 7/428 (1%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           R+ EA  +   ++  G  P   T   ++     +     A N+F+EM+        VC P
Sbjct: 185 RLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG-----VC-P 238

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           ++ ++  ++ G  ++G + +A   L  M  +   P+  T T ++   C     N A   F
Sbjct: 239 DSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYF 298

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M+D G +PN++ F  ++D LCK G + +A  +L+ M+++G +P+ +T+  L+DG C  
Sbjct: 299 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 358

Query: 218 GRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           G    A  LF+ +  S   K  V +Y+ +I GYCK  ++  A  L+S M  +G+ P+V  
Sbjct: 359 GWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 418

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + TL  G  +    +RA++L + M   G   + +TY   ID LCK     EA EL +   
Sbjct: 419 YTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAF 478

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E D   Y  LI   CK   ++ AL  F  +       ++   +I+I   C   +M 
Sbjct: 479 SCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 538

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           ++  LF  +    +VP   T+  +I G+ +  +    ++  H MK    +PD+     ++
Sbjct: 539 ESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLI 598

Query: 457 DLLAKNEI 464
             L K  +
Sbjct: 599 SGLCKKSM 606



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 192/397 (48%), Gaps = 25/397 (6%)

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+V  L   S ++VAL  F   A G  +F          Y    D L   G + KA E++
Sbjct: 119 TVVASLASESGSMVALCFFY-WAVGFEKFRHFMR----LYLVTADSLIANGNLQKAHEVM 173

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M               +R F      NEA  + ++M +QG+ P+ +T N +++   ++
Sbjct: 174 RCM---------------LRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIES 218

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +D A  + D M   GV PD+ ++  ++ G    G++  A      M   G      + 
Sbjct: 219 GLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATC 278

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +++++  C+N  +  A+  + +M+  G KP+++   +L  GL +   +++AF++ +EM R
Sbjct: 279 TLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 338

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF---DIRAYNSLIDGLCKSGR 359
           NG   + +T+   IDGLCK G+  +A  LF  L++++ +    ++  Y S+I G CK  +
Sbjct: 339 NGWKPNVYTHTALIDGLCKRGWTEKAFRLF--LKLVRSDIYKPNVHTYTSMIGGYCKEDK 396

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  A  LF  +    L PNV TY+ +I G C  G  D+A +L   M++    PN+ T++ 
Sbjct: 397 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNA 456

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +I    + +   +  ELL+K     +  D    +I++
Sbjct: 457 VIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 493


>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 567

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/455 (30%), Positives = 224/455 (49%), Gaps = 7/455 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+S  F  L  I+K+   PD V  T L+  LC  +++ +A  +   +   G  PD  +YT
Sbjct: 77  RISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYT 136

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LVN LC+  +   A+ L E+M +           NTVTY T++ GLC  G ++K+ + L
Sbjct: 137 FLVNHLCKRGNVGYAMQLVEKMEDSG------YPANTVTYNTLVKGLCMHGNLNKSLQFL 190

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            ++  K + PN  TY+S++      +  NEA RL  E++ +G QPN+V++NV++  LCK 
Sbjct: 191 DRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKE 250

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+++EA RL   +   G  P+  +YN LL   C  GR   A EL   M       ++ +Y
Sbjct: 251 GRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTY 310

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +ILI     + +IE AL +  EM+    KP    +N +   L +  +VE      D+M  
Sbjct: 311 NILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIF 370

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
              + +  T+   I  LC  G + EA  L  +L   +       Y  ++  LCK G    
Sbjct: 371 GRCSPNEGTFNA-IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYP 429

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  L   +      P+  TYS +I GLC +G + +A ++F  +EE+   P++  F+ LI 
Sbjct: 430 AFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALIL 489

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           GF + +     +E+   M E    P  +  +I+V+
Sbjct: 490 GFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVE 524



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 149/302 (49%), Gaps = 35/302 (11%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           ++  G +P+VV    ++ +LCK+ KM +A R++++MI  G+ PDA               
Sbjct: 88  IVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAA-------------- 133

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
                                SY+ L+N  CK   +  A+ L  +M   G   + V +NT
Sbjct: 134 ---------------------SYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNT 172

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  GL     + ++ +  D + + G+  + +TY + ++   K   + EA+ L   +    
Sbjct: 173 LVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKG 232

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + ++ +YN L+ GLCK GR+E A+ LF++LP     PNVV+Y+I++  LC +G+ ++A 
Sbjct: 233 GQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEAN 292

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +L  +M      P+++T+++LI       +  + ++++ +M      P A+  + ++  L
Sbjct: 293 ELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARL 352

Query: 460 AK 461
            K
Sbjct: 353 CK 354



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 160/381 (41%), Gaps = 75/381 (19%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++     L R+++    P+A T++SL++    E  + EA  L  ++   G +P++ +Y
Sbjct: 181 GNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSY 240

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLC+      A+ LF+ + +          PN V+Y  ++  LC EG  ++A EL
Sbjct: 241 NVLLTGLCKEGRIEEAIRLFKNLPSKG------FSPNVVSYNILLRSLCYEGRWEEANEL 294

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM-------------------- 161
           L +M  +   P++VTY  +I    +     +A ++  EMM                    
Sbjct: 295 LAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCK 354

Query: 162 -----------DQGV----QPNVVTFNVI------------------------------- 175
                      DQ +     PN  TFN I                               
Sbjct: 355 EGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYY 414

Query: 176 ---MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
              +  LCK G    A  LL  M ++G  PD++TY++L+ G C+ G +  A E+F  +E 
Sbjct: 415 KGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEE 474

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
              +  + +++ LI G+CK+   + +L ++  M+ KG  P    +  L  G+    + E 
Sbjct: 475 DHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKEL 534

Query: 293 AFKLFDEMQRNGVAADTWTYR 313
           A ++  E+    V + +   R
Sbjct: 535 AAEVLRELHLRQVMSQSTVER 555


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 232/489 (47%), Gaps = 32/489 (6%)

Query: 3   RVSHGFVVLGRILKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFT 60
           RV     +   + ++C   PD V + +LI G C       A  +F +L+  G C+P+  +
Sbjct: 104 RVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVS 163

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGV--------------------------- 93
           + TLV  LC+ S    AL +F+EM     +  V                           
Sbjct: 164 FDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMT 223

Query: 94  --VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
              C  +  TY  +++  C+ G + +    +   +      + V Y  +I+GF       
Sbjct: 224 AHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLA 283

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           EA +LF   M +   P+V T+N+++  LCK+ +++EA  L     Q GV  D FTY+ L+
Sbjct: 284 EATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLM 342

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           D F   GR   A E+F +M+  GC      Y++LI+   K  +++ AL L  +M  KGI 
Sbjct: 343 DAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 402

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PD   +N +   L    + E+A+  F  M+R   + D  TY T ++GL K     EA +L
Sbjct: 403 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 462

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  ++  KC  D+  + +LID L K+GR+E ALE    L      PN   Y+ +I G C 
Sbjct: 463 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCR 522

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            GQ+DK  +LF DM E +  P+ IT+ +L+ GF R    S  +ELL +M      P  + 
Sbjct: 523 SGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALAT 582

Query: 452 VSIVVDLLA 460
            ++++  L+
Sbjct: 583 YNVLIRSLS 591



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 208/409 (50%), Gaps = 7/409 (1%)

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
           C+PD   +T  ++ LC       A+ LF++M          C P+ V Y T+I G CK G
Sbjct: 85  CQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRET-----CDCAPDVVAYNTLIAGYCKAG 139

Query: 114 FVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
             D+A ++  ++K + + KPN V++ +++   C      +A  +F EM+  G++ +V   
Sbjct: 140 DGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVC 199

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++   C+ G + +A RLL  M  H    DAFTY  L++  C  G+++           
Sbjct: 200 NTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARH 259

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            GC  +  +Y+ +I G+ +   +  A  L+   ++K   PDV  +N L + L +  Q+E 
Sbjct: 260 DGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYN-LLIALCKSKQLEE 318

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  LF E ++ GV  D +TY   +D   K G   +A+E+F+ ++   C  D   YN LI 
Sbjct: 319 ALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLIS 378

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            L K G+++ ALEL   +    ++P+  TY+I+I  L + G+ +KA   F  M+     P
Sbjct: 379 CLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSP 438

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +V+T++ L+ G  ++    +  +L  +M+    MPD +    ++D LAK
Sbjct: 439 DVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAK 487



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 180/365 (49%), Gaps = 4/365 (1%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T T ++  +CK G  +   ELL +++ K +  + VT T  I+ F  A D + A  +  +M
Sbjct: 20  TATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDM 79

Query: 161 MDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH-GVRPDAFTYNTLLDGFCLTG 218
                 QP+ V F   M  LC+  ++++A  L D M +     PD   YNTL+ G+C  G
Sbjct: 80  RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAG 139

Query: 219 RVNHAKELFVSMESMG-CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             + A ++F  ++  G CK    S+  L+   CK      AL+++ EML  G+K DV + 
Sbjct: 140 DGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVC 199

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           NTL      +  + +A +L   M  +  A D +TY   ++  C+ G + E        R 
Sbjct: 200 NTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARH 259

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
             C      YN +I G  + GRL  A +LF S      VP+V TY+++I  LC   Q+++
Sbjct: 260 DGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEE 318

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  LF + E+  VV +V T+  L+  F +    +K +E+ + M++   MPD  + ++++ 
Sbjct: 319 ALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLIS 378

Query: 458 LLAKN 462
            L K 
Sbjct: 379 CLGKQ 383



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 193/457 (42%), Gaps = 46/457 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M R +    V   +L +    D     +LI   C    + +A  L   +    C  D FT
Sbjct: 174 MSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFT 233

Query: 61  YTTLVNGLCRTS--HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           Y  LVN  CR    H + +   F E+A  +G     C  + V Y  II G  + G + +A
Sbjct: 234 YGILVNAHCRAGQMHEVAS---FMELARHDG-----CALSAVNYNFIIQGFIRCGRLAEA 285

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE------------------- 159
            +L      K   P+V TY  +I   C +K   EA  LF E                   
Sbjct: 286 TQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDA 344

Query: 160 ----------------MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
                           M   G  P+ V +NV++  L K GK+DEA  LL+ M + G+ PD
Sbjct: 345 FGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 404

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             TYN ++D     GR   A   F  M+       V +Y+ L+NG  K +  + A  L+ 
Sbjct: 405 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFD 464

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM +    PD+    TL   L +  ++E A +    + + G A +++ Y   I G C++G
Sbjct: 465 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSG 524

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + +  ELF  +    C  D   Y  L+ G  + G   +A+EL + +      P + TY+
Sbjct: 525 QVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYN 584

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           ++I  L   GQ++ A  LF +M      P++ T+  L
Sbjct: 585 VLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 6/254 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  + +    PD  T+  +I  L +  R  +A + F  ++     PDV TY
Sbjct: 384 GKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTY 443

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NGL +   T  A +LF+EM          C P+  T+ T+ID L K G ++ A E 
Sbjct: 444 NTLLNGLKKLRRTDEACDLFDEMQANK------CMPDLTTFGTLIDTLAKAGRMEDALEQ 497

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++      PN   Y ++I GFC +   ++   LF +M++    P+ +T+ +++    +
Sbjct: 498 SARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSR 557

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A  LL  M++ G  P   TYN L+    + G+V  A  LF  M + G    + +
Sbjct: 558 RGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQT 617

Query: 242 YSILINGYCKNKEI 255
           YS L N    NK +
Sbjct: 618 YSALPNLSTPNKSV 631



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/324 (21%), Positives = 140/324 (43%), Gaps = 4/324 (1%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           +  ++  G+  +  T   ++ E+CK G+ +  + LL  + Q GV     T    +  F  
Sbjct: 6   YKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGR 65

Query: 217 TGRVNHAKELFVSMESMG-CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDV 274
            G ++ A  +   M     C+    +++  ++  C+ + +E A++L+ +M       PDV
Sbjct: 66  AGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDV 125

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNG-VAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           V +NTL  G  +    +RA  +F  +++ G    +  ++ T +  LCK     +A+ +F 
Sbjct: 126 VAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQ 185

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +     + D+   N+LI   C+ G L  A  L   +       +  TY I++   C  G
Sbjct: 186 EMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAG 245

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           QM +          +    + + ++ +I+GFIR    ++  +L         +PD    +
Sbjct: 246 QMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYN 305

Query: 454 IVVDLLAKNEISLNSLPSFTVHEQ 477
           +++ L    ++   +L  F   EQ
Sbjct: 306 LLIALCKSKQLE-EALTLFQEAEQ 328


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 213/409 (52%), Gaps = 6/409 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           TF  +I  LC E ++ +A      +   G +P+V TY T+++G C       A  + + M
Sbjct: 238 TFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIM 297

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            N     GV  EP++ TY ++I G+CK G +++A  +L +MK+  + P  VTY ++I G+
Sbjct: 298 KNR----GV--EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGY 351

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C   D  +A     EM+ + + P V T+N+++  L   GKMDEA  ++  M   G+ PD+
Sbjct: 352 CNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDS 411

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TYN L++G+C  G    A  L   M S G + T+ +Y+ LI    K   ++ A  L+ +
Sbjct: 412 ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEK 471

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           ++ +G  PD+++ N L  G      ++RAF L  EM +  +  D  TY T + G C+ G 
Sbjct: 472 IIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGK 531

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + EA EL   ++      D  +YN+LI G  K G +  A  +   +      P ++TY+ 
Sbjct: 532 VEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNA 591

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
           +I GLC + Q D A +L  +M    + P+  T+  LI G  ++++ S+ 
Sbjct: 592 LIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 241/478 (50%), Gaps = 43/478 (8%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           T  ++ F  LI+  C   R  +A   F  ++  G  P + T+  +++   + + T     
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWV 222

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L+ EM      F +  +    T+  +I+ LCKEG + KAK+ +  M++  +KPNVVTY +
Sbjct: 223 LYAEM------FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNT 276

Query: 140 VIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           VI G+C ++   E  R+ +++M ++GV+P+  T+  ++  +CK GK++EAS +L+ M + 
Sbjct: 277 VIHGYC-SRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEI 335

Query: 199 GVRPDAFTYNTLLDGFC-----------------------------------LTGRVNHA 223
           G+ P A TYNTL+DG+C                                   L G+++ A
Sbjct: 336 GLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEA 395

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             +   M   G      +Y+ILINGYC+    + A +L+ EM+SKGI+P +V + +L   
Sbjct: 396 DGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYV 455

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L + ++++ A  LF+++ R G + D   +   IDG C NG +  A  L   +       D
Sbjct: 456 LSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPD 515

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              YN+L+ G C+ G++E A EL + +    + P+ ++Y+ +I G    G ++ A  +  
Sbjct: 516 EVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRD 575

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +M      P ++T++ LI+G  +  +     ELL +M    + PD S    +++ + K
Sbjct: 576 EMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 198/380 (52%), Gaps = 9/380 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+ ++I G C+  R+  A  +   ++  G EPD +TY +L++G+C+      A  +
Sbjct: 269 PNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGI 328

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E+M     E G++  P  VTY T+IDG C +G + KA     +M  + I P V TY  +
Sbjct: 329 LEKMK----EIGLL--PTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLL 382

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I         +EA  +  +M D G+ P+ +T+N++++  C+ G   +A  L D MI  G+
Sbjct: 383 IHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGI 442

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P   TY +L+       R+  A +LF  +   G    +  ++ LI+G+C N  ++ A +
Sbjct: 443 QPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFA 502

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  EM  + I PD V +NTL  G     +VE A +L  EM+R G+  D  +Y T I G  
Sbjct: 503 LLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYS 562

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G I +A  +   +  +     +  YN+LI GLCK+ + ++A EL + +    + P+  
Sbjct: 563 KRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622

Query: 381 TYSIMIGGLCNDGQMDKARD 400
           TY  +I G+   G++D + +
Sbjct: 623 TYFSLIEGI---GKVDDSSE 639



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 175/351 (49%), Gaps = 33/351 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV    +VL  +      PD+ T+ SLI G+C   ++ EA+ +  K++  G  P   TY
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 62  TTLVNGLCRTSHTIVALNLFEEM---------------------------ANG----NGE 90
            TL++G C     + A    +EM                           A+G     G+
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404

Query: 91  FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
            G+V  P+++TY  +I+G C+ G   KA  L  +M  K I+P +VTYTS+I         
Sbjct: 405 SGIV--PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
             A  LF +++ +G  P+++ FN ++D  C NG +D A  LL  M +  + PD  TYNTL
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           + G C  G+V  A+EL   M+  G +    SY+ LI+GY K  +I  A ++  EMLS G 
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGF 582

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
            P ++ +N L  GL +  Q + A +L  EM   G+  D  TY + I+G+ K
Sbjct: 583 NPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 191/405 (47%), Gaps = 38/405 (9%)

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++F E+A      G     +++ +  +I   C+    D A E    MK+K + P + T+ 
Sbjct: 149 DVFHELAITRDRLGT---KSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFN 205

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +++  F           L+ EM    ++  V TFN++++ LCK GK+ +A   +  M   
Sbjct: 206 AMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENL 265

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV+P+  TYNT++ G+C  GRV  A+ +   M++ G +   ++Y  LI+G CK  ++E A
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEA 325

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR---------------- 302
             +  +M   G+ P  V +NTL  G      + +AF   DEM R                
Sbjct: 326 SGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHA 385

Query: 303 -------------------NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                              +G+  D+ TY   I+G C+ G   +A  L   +     +  
Sbjct: 386 LFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPT 445

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y SLI  L K  R++ A +LF  +      P+++ ++ +I G C +G +D+A  L  
Sbjct: 446 LVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLK 505

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +M++  +VP+ +T++ L++G  R  +  +  ELL +MK   + PD
Sbjct: 506 EMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPD 550



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 143/314 (45%), Gaps = 39/314 (12%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G + ++V F++++   C+  + D+A    D+M + GV P   T+N +L  F    +    
Sbjct: 162 GTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETV 220

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             L+  M  +  K TV++++I+IN  CK  +++ A      M + G+KP+VV        
Sbjct: 221 WVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVV-------- 272

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                                      TY T I G C  G +  A  +   ++    E D
Sbjct: 273 ---------------------------TYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPD 305

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              Y SLI G+CK G+LE A  +   +    L+P  VTY+ +I G CN G + KA     
Sbjct: 306 SYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRD 365

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +M   A++P V T+++LI       +  +   ++  M +  ++PD+   +I+++   +  
Sbjct: 366 EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCR-- 423

Query: 464 ISLNSLPSFTVHEQ 477
              N+  +F +H++
Sbjct: 424 -CGNAKKAFNLHDE 436


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 221/430 (51%), Gaps = 16/430 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ VT+T+LI       ++  A  LF  +   GC P+V TYT L++G C++     A  
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 80  LFEEMANGNGEF-----------GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           ++  M  GN +            G + +PN  TY  ++DGLCK   V +A++LL  M  +
Sbjct: 607 IYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             +PN + Y ++I GFC     +EA+ +F +M ++G  PNV T++ ++D L K+ ++D A
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++L  M+++   P+   Y  ++DG C  G+ + A  L   ME  GC   V +Y+ +I+G
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           + K  +++  L L  +M +KG  P+ V +  L         ++ A +L DEM++      
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
              YR  I+G   N   + ++ L   +        I AY  LID  CK+GRLE+ALEL +
Sbjct: 846 MAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHK 903

Query: 369 SLPC--GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            +         +   YS +I  L    ++DKA +L+ DM +   +P +  F  L++G IR
Sbjct: 904 EMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963

Query: 427 INEPSKVIEL 436
           IN   + ++L
Sbjct: 964 INRWEEALQL 973



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 218/461 (47%), Gaps = 19/461 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I + C+ P    F SLI   C       A  L  K+   GC+P    Y  L+ G+C  + 
Sbjct: 361 ITEGCY-PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC-GNE 418

Query: 74  TIVALNLFEEMANGNGE-FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
            + +L++ E      GE        N V  + +   LC  G  +KA  ++ +M  K   P
Sbjct: 419 KLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP 478

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +  TY+ VI   C A   + A  LF EM    V P+V T+ +++D  CK G + +A +  
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M++ G  P+  TY  L+  +    +++ A ELF  M S GC   V +Y+ LI+G+CK+
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598

Query: 253 KEIEGALSLYSEMLSKGIKPDV----------------VIHNTLFVGLFEIHQVERAFKL 296
            +IE A  +Y+ M      PDV                  +  L  GL + H+V+ A  L
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            D M   G   +   Y   IDG CK G + EA  +F  +       ++  Y+SLID L K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
             RL++AL++   +      PNV+ Y+ MI GLC  G+ D+A  L   MEE    PNV+T
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +  +I GF +  +  K +EL+ +M      P+     ++++
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 234/509 (45%), Gaps = 63/509 (12%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY-------- 61
            L  I K  F  D V +T +I GLC  S   EA    +++R   C P+V TY        
Sbjct: 286 ALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345

Query: 62  ---------------------------TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
                                       +L++  CR+     A  L ++M    G+ G  
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG-- 399

Query: 95  CEPNTVTYTTIIDGLCKE------GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           C+P  V Y  +I G+C          ++ A++   +M D ++  N V  +++ R  C A 
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            + +A  +  EMM +G  P+  T++ ++  LC   K+D A  L + M  + V PD FTY 
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+D FC  G +  A++ F  M   GC   V +Y+ LI+ Y K +++  A  L+  MLS+
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT----------------WTY 312
           G  P+VV +  L  G  +  Q+E+A +++  M+ N    D                 +TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              +DGLCK   + EA +L   + +  CE +   Y++LIDG CK G+L+ A  +F  +  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               PNV TYS +I  L  D ++D A  +   M EN+  PNVI +  +I G  ++ +  +
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAK 461
              L+  M+E    P+    + ++D   K
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGK 788



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 216/483 (44%), Gaps = 31/483 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   ++V   +  S F  D  T    +  LC   R  EA AL  K      + D   YT
Sbjct: 247 RLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYT 303

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++GLC  S    A++    M + +      C PN VTY  ++ G  ++  + + K +L
Sbjct: 304 QMISGLCEASLFEEAMDFLSRMRSSS------CIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  +   P+   + S+I  +C + D++ A +L  +M D G QP  V +N+++  +C N
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 183 GKMDE------ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
            K+        A +    M+   V  +    + L    C  G+   A  +   M S G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +YS +I   C   +++ A  L+ EM S  + PDV  +  L     ++  +++A K 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           FDEM R+G A +  TY   I    K   +  A ELF  +    C  ++  Y +LIDG CK
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 357 SGRLEIALELFRSLPCGVLVP----------------NVVTYSIMIGGLCNDGQMDKARD 400
           SG++E A +++  +     +P                N+ TY  ++ GLC   ++ +ARD
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L   M      PN I +D LI GF ++ +  +   +  KM E    P+    S ++D L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 461 KNE 463
           K++
Sbjct: 718 KDK 720



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 205/490 (41%), Gaps = 66/490 (13%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           LI+  C       A     +L+  G +P   TY  LV           A  +  EM++  
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                    +  T    +  LCK G   + +E L  ++ +  K + V YT +I G C A 
Sbjct: 263 FNM------DGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEAS 313

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            + EA      M      PNVVT+ +++    +  ++    R+L +MI  G  P    +N
Sbjct: 314 LFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN 373

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI------------- 255
           +L+  +C +G  ++A +L   M   GC+     Y+ILI G C N+++             
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433

Query: 256 ----------------------------EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
                                       E A S+  EM+SKG  PD   ++ +   L   
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            +V+ AF LF+EM+ N V  D +TY   ID  CK G + +A + F  +    C  ++  Y
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +LI    K+ ++  A ELF  +     +PNVVTY+ +I G C  GQ++KA  ++  M  
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 408 NAVV----------------PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           NA +                PN+ T+  L+ G  + ++  +  +LL  M      P+  +
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 452 VSIVVDLLAK 461
              ++D   K
Sbjct: 674 YDALIDGFCK 683



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 146/304 (48%), Gaps = 18/304 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++    +V  ++ +  + P+  T++SLI  L  + R+  A  + +++    C P+V  
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++GLC+   T  A  L   M          C PN VTYT +IDG  K G VDK  E
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKG------CHPNVVTYTAMIDGFGKAGKVDKCLE 797

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+ QM  K   PN VTY  +I   C A   ++A +L  EM       ++  +  +++   
Sbjct: 798 LMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF- 856

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            N +   +  LLD + ++   P    Y  L+D FC  GR+  A EL   M S     T +
Sbjct: 857 -NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSC----TSY 911

Query: 241 S------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           S      YS LI       +++ A  LY++M+ +G  P++ I   L  GL  I++ E A 
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEAL 971

Query: 295 KLFD 298
           +L D
Sbjct: 972 QLSD 975



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 144/384 (37%), Gaps = 83/384 (21%)

Query: 172 FNVIMDELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
            NV++ + C+NG     ++E  RL DL    G +P   TYN L+  F    R++ A  + 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDL----GYKPSRLTYNALVRVFLEADRLDTAYLVH 255

Query: 228 VSME---------SMGC-----------------------KHTVFSYSILINGYCKNKEI 255
             M          ++GC                       K     Y+ +I+G C+    
Sbjct: 256 REMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E A+   S M S    P+VV +  L  G     Q+ R  ++   M   G       + + 
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG---------------------- 353
           I   C++G    A +L   +    C+     YN LI G                      
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435

Query: 354 -------------------LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                              LC +G+ E A  + R +     +P+  TYS +IG LCN  +
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D A  LF +M+ N VVP+V T+ +LI  F ++    +  +   +M      P+    + 
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 455 VVD--LLAKNEISLNSLPSFTVHE 476
           ++   L A+   S N L    + E
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSE 579



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 11/241 (4%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++LI   C+N     AL     +   G KP  + +N L     E  +++ A+ +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRL 360
           +G   D +T   F+  LCK G   EA+ L     I K EF  D   Y  +I GLC++   
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL-----IEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A++    +     +PNVVTY I++ G     Q+ + + +   M      P+   F+ L
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           I  + R  + S   +LL KM +    P   + +I++  +  NE     LPS  V E  E+
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE----KLPSLDVLELAEK 431

Query: 481 V 481
            
Sbjct: 432 A 432


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 221/430 (51%), Gaps = 16/430 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ VT+T+LI       ++  A  LF  +   GC P+V TYT L++G C++     A  
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 80  LFEEMANGNGEF-----------GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           ++  M  GN +            G + +PN  TY  ++DGLCK   V +A++LL  M  +
Sbjct: 607 IYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             +PN + Y ++I GFC     +EA+ +F +M ++G  PNV T++ ++D L K+ ++D A
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++L  M+++   P+   Y  ++DG C  G+ + A  L   ME  GC   V +Y+ +I+G
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           + K  +++  L L  +M +KG  P+ V +  L         ++ A +L DEM++      
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
              YR  I+G   N   + ++ L   +        I AY  LID  CK+GRLE+ALEL +
Sbjct: 846 MAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHK 903

Query: 369 SLPC--GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            +         +   YS +I  L    ++DKA +L+ DM +   +P +  F  L++G IR
Sbjct: 904 EMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963

Query: 427 INEPSKVIEL 436
           IN   + ++L
Sbjct: 964 INRWEEALQL 973



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 218/461 (47%), Gaps = 19/461 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I + C+ P    F SLI   C       A  L  K+   GC+P    Y  L+ G+C  + 
Sbjct: 361 ITEGCY-PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC-GNE 418

Query: 74  TIVALNLFEEMANGNGE-FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
            + +L++ E      GE        N V  + +   LC  G  +KA  ++ +M  K   P
Sbjct: 419 KLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP 478

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +  TY+ VI   C A   + A  LF EM    V P+V T+ +++D  CK G + +A +  
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M++ G  P+  TY  L+  +    +++ A ELF  M S GC   V +Y+ LI+G+CK+
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598

Query: 253 KEIEGALSLYSEMLSKGIKPDV----------------VIHNTLFVGLFEIHQVERAFKL 296
            +IE A  +Y+ M      PDV                  +  L  GL + H+V+ A  L
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            D M   G   +   Y   IDG CK G + EA  +F  +       ++  Y+SLID L K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
             RL++AL++   +      PNV+ Y+ MI GLC  G+ D+A  L   MEE    PNV+T
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +  +I GF +  +  K +EL+ +M      P+     ++++
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 234/509 (45%), Gaps = 63/509 (12%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY-------- 61
            L  I K  F  D V +T +I GLC  S   EA    +++R   C P+V TY        
Sbjct: 286 ALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345

Query: 62  ---------------------------TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
                                       +L++  CR+     A  L ++M    G+ G  
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG-- 399

Query: 95  CEPNTVTYTTIIDGLCKE------GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           C+P  V Y  +I G+C          ++ A++   +M D ++  N V  +++ R  C A 
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            + +A  +  EMM +G  P+  T++ ++  LC   K+D A  L + M  + V PD FTY 
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+D FC  G +  A++ F  M   GC   V +Y+ LI+ Y K +++  A  L+  MLS+
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT----------------WTY 312
           G  P+VV +  L  G  +  Q+E+A +++  M+ N    D                 +TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              +DGLCK   + EA +L   + +  CE +   Y++LIDG CK G+L+ A  +F  +  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               PNV TYS +I  L  D ++D A  +   M EN+  PNVI +  +I G  ++ +  +
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAK 461
              L+  M+E    P+    + ++D   K
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGK 788



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 216/483 (44%), Gaps = 31/483 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   ++V   +  S F  D  T    +  LC   R  EA AL  K      + D   YT
Sbjct: 247 RLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYT 303

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++GLC  S    A++    M + +      C PN VTY  ++ G  ++  + + K +L
Sbjct: 304 QMISGLCEASLFEEAMDFLSRMRSSS------CIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  +   P+   + S+I  +C + D++ A +L  +M D G QP  V +N+++  +C N
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 183 GKMDE------ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
            K+        A +    M+   V  +    + L    C  G+   A  +   M S G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +YS +I   C   +++ A  L+ EM S  + PDV  +  L     ++  +++A K 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           FDEM R+G A +  TY   I    K   +  A ELF  +    C  ++  Y +LIDG CK
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 357 SGRLEIALELFRSLPCGVLVP----------------NVVTYSIMIGGLCNDGQMDKARD 400
           SG++E A +++  +     +P                N+ TY  ++ GLC   ++ +ARD
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L   M      PN I +D LI GF ++ +  +   +  KM E    P+    S ++D L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 461 KNE 463
           K++
Sbjct: 718 KDK 720



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 205/490 (41%), Gaps = 66/490 (13%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           LI+  C       A     +L+  G +P   TY  LV           A  +  EM++  
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                    +  T    +  LCK G   + +E L  ++ +  K + V YT +I G C A 
Sbjct: 263 FNM------DGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEAS 313

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            + EA      M      PNVVT+ +++    +  ++    R+L +MI  G  P    +N
Sbjct: 314 LFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN 373

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI------------- 255
           +L+  +C +G  ++A +L   M   GC+     Y+ILI G C N+++             
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433

Query: 256 ----------------------------EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
                                       E A S+  EM+SKG  PD   ++ +   L   
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            +V+ AF LF+EM+ N V  D +TY   ID  CK G + +A + F  +    C  ++  Y
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +LI    K+ ++  A ELF  +     +PNVVTY+ +I G C  GQ++KA  ++  M  
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 408 NAVV----------------PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           NA +                PN+ T+  L+ G  + ++  +  +LL  M      P+  +
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 452 VSIVVDLLAK 461
              ++D   K
Sbjct: 674 YDALIDGFCK 683



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 146/304 (48%), Gaps = 18/304 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++    +V  ++ +  + P+  T++SLI  L  + R+  A  + +++    C P+V  
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++GLC+   T  A  L   M          C PN VTYT +IDG  K G VDK  E
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKG------CHPNVVTYTAMIDGFGKAGKVDKCLE 797

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+ QM  K   PN VTY  +I   C A   ++A +L  EM       ++  +  +++   
Sbjct: 798 LMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF- 856

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            N +   +  LLD + ++   P    Y  L+D FC  GR+  A EL   M S     T +
Sbjct: 857 -NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSC----TSY 911

Query: 241 S------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           S      YS LI       +++ A  LY++M+ +G  P++ I   L  GL  I++ E A 
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEAL 971

Query: 295 KLFD 298
           +L D
Sbjct: 972 QLSD 975



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 144/384 (37%), Gaps = 83/384 (21%)

Query: 172 FNVIMDELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
            NV++ + C+NG     ++E  RL DL    G +P   TYN L+  F    R++ A  + 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDL----GYKPSRLTYNALVRVFLEADRLDTAYLVH 255

Query: 228 VSME---------SMGC-----------------------KHTVFSYSILINGYCKNKEI 255
             M          ++GC                       K     Y+ +I+G C+    
Sbjct: 256 REMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E A+   S M S    P+VV +  L  G     Q+ R  ++   M   G       + + 
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG---------------------- 353
           I   C++G    A +L   +    C+     YN LI G                      
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435

Query: 354 -------------------LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                              LC +G+ E A  + R +     +P+  TYS +IG LCN  +
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D A  LF +M+ N VVP+V T+ +LI  F ++    +  +   +M      P+    + 
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 455 VVD--LLAKNEISLNSLPSFTVHE 476
           ++   L A+   S N L    + E
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSE 579



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 11/241 (4%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++LI   C+N     AL     +   G KP  + +N L     E  +++ A+ +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRL 360
           +G   D +T   F+  LCK G   EA+ L     I K EF  D   Y  +I GLC++   
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL-----IEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A++    +     +PNVVTY I++ G     Q+ + + +   M      P+   F+ L
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           I  + R  + S   +LL KM +    P   + +I++  +  NE     LPS  V E  E+
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE----KLPSLDVLELAEK 431

Query: 481 V 481
            
Sbjct: 432 A 432


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 220/432 (50%), Gaps = 24/432 (5%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+ D V+F  L+  LC     + +A L  +LR +G  P   +   +   LCR      A+
Sbjct: 194 FSSDPVSFDLLL--LC-----LPSAPLLLRLRQYGISPSPESCNAV---LCRLPLD-EAV 242

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF+E+           E NT +Y  ++  LC  G +  A +L  +M      P+VVTY 
Sbjct: 243 QLFQELP----------EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYG 289

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            ++ G+C   +   A +L  EM  +G++ N V +  ++  LC  G++ +A R+++ M+ H
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV  DA  + T++ GFC  G +  A+  F  M+  G      +Y+ LING C+  E++ A
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             +  EM  KG+  D V +  L  G  ++ ++  AF + ++M +  V  +  TY    DG
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G +  A EL H +     E +I  YNSLI+GLCK+G LE A+     +    L P+
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V TY+ +IG LC   ++D+A  L  +M +  + P ++T+++L+ GF           LL 
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589

Query: 439 KMKEINVMPDAS 450
            M E N+ P+ +
Sbjct: 590 WMLEKNIHPNTT 601



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 227/473 (47%), Gaps = 33/473 (6%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           ++  L+K LC   RI +A  LF ++      PDV TY  +V+G C  S    A+ L  EM
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 85  ANGNGEF---------GVVCEPNTVT--------------------YTTIIDGLCKEGFV 115
           A    E           ++C+   V+                    +TT++ G C++G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A+    +M+ + +  + VTYT++I G C A +  EA+R+  EM D+G+  + VT+ V+
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D  CK GKM EA  + + M+Q  V P+  TY  L DG C  G V  A EL   M S G 
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  +F+Y+ LING CK   +E A+    +M   G+KPDV  + T+   L +  +++RA  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  EM   G+     TY   ++G C +G +     L   +       +   YNSL+   C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
               ++   E+++ +    +VPN  TY+I+I G C    M +A     +M E        
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           +++ LIR   +  + ++   L  KM++  +  +  + +  +D L+ NE +L S
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID-LSFNEDNLES 723



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 170/351 (48%), Gaps = 6/351 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K     D VT+T+LI GLC    + EA  +  ++   G + D  TYT L++G C+     
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  +  +M            PN VTYT + DGLCK+G V  A ELL +M  K ++ N+ 
Sbjct: 443 EAFLVHNKMVQKR------VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY S+I G C A +  +A R  I+M + G++P+V T+  I+  LC++ ++D A  LL  M
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +  G++P   TYN L++GFC++GRV   K L   M          +Y+ L+  YC  K +
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +    +Y  MLS+ + P+   +N L  G  +   ++ A     EM   G      +Y   
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           I  L K     EA  LF  +R  +   +   YN  ID       LE  L L
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLAL 727



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 152/300 (50%), Gaps = 6/300 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F+V  ++++   TP+ VT+T+L  GLC +  +  A  L  ++   G E ++FT
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+NGLC+  +   A+    +M     E G+  +P+  TYTTII  LC+   +D+A  
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDM----DEAGL--KPDVYTYTTIIGALCQSKELDRAHS 551

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M DK IKP +VTY  ++ GFC +      KRL   M+++ + PN  T+N +M + C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
               M   + +   M+   V P+  TYN L+ G C    +  A      M   G + T  
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LI    K K+   A  L+ +M  + +  +  ++N      F    +E    L DE+
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 166/343 (48%), Gaps = 11/343 (3%)

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LLL+++   I P+  +  +V+   C     +EA +LF E+ ++    N  ++N+++  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELPEK----NTCSYNILLKALC 264

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G++ +A +L D M      PD  TY  ++ G+C    +  A +L   M + G +    
Sbjct: 265 TAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I   C   ++  A+ +  +M+  G+  D  +  T+  G      +  A   FDEM
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           Q+ G+AAD  TY   I+GLC+ G + EA  +   +     + D   Y  LIDG CK G++
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  +   +    + PNVVTY+ +  GLC  G +  A +L  +M    +  N+ T++ L
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           I G  +     + +  +  M E  + PD    + ++  L +++
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 220/432 (50%), Gaps = 24/432 (5%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+ D V+F  L+  LC     + +A L  +LR +G  P   +   +   LCR      A+
Sbjct: 194 FSSDPVSFDLLL--LC-----LPSAPLLLRLRQYGISPSPESCNAV---LCRLP-LDEAV 242

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF+E+           E NT +Y  ++  LC  G +  A +L  +M      P+VVTY 
Sbjct: 243 QLFQELP----------EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYG 289

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            ++ G+C   +   A +L  EM  +G++ N V +  ++  LC  G++ +A R+++ M+ H
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           GV  DA  + T++ GFC  G +  A+  F  M+  G      +Y+ LING C+  E++ A
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             +  EM  KG+  D V +  L  G  ++ ++  AF + ++M +  V  +  TY    DG
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G +  A EL H +     E +I  YNSLI+GLCK+G LE A+     +    L P+
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V TY+ +IG LC   ++D+A  L  +M +  + P ++T+++L+ GF           LL 
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589

Query: 439 KMKEINVMPDAS 450
            M E N+ P+ +
Sbjct: 590 WMLEKNIHPNTT 601



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 227/473 (47%), Gaps = 33/473 (6%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           ++  L+K LC   RI +A  LF ++      PDV TY  +V+G C  S    A+ L  EM
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 85  ANGNGEF---------GVVCEPNTVT--------------------YTTIIDGLCKEGFV 115
           A    E           ++C+   V+                    +TT++ G C++G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A+    +M+ + +  + VTYT++I G C A +  EA+R+  EM D+G+  + VT+ V+
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D  CK GKM EA  + + M+Q  V P+  TY  L DG C  G V  A EL   M S G 
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  +F+Y+ LING CK   +E A+    +M   G+KPDV  + T+   L +  +++RA  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L  EM   G+     TY   ++G C +G +     L   +       +   YNSL+   C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
               ++   E+++ +    +VPN  TY+I+I G C    M +A     +M E        
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           +++ LIR   +  + ++   L  KM++  +  +  + +  +D L+ NE +L S
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID-LSFNEDNLES 723



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 170/351 (48%), Gaps = 6/351 (1%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K     D VT+T+LI GLC    + EA  +  ++   G + D  TYT L++G C+     
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  +  +M            PN VTYT + DGLCK+G V  A ELL +M  K ++ N+ 
Sbjct: 443 EAFLVHNKMVQKR------VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY S+I G C A +  +A R  I+M + G++P+V T+  I+  LC++ ++D A  LL  M
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           +  G++P   TYN L++GFC++GRV   K L   M          +Y+ L+  YC  K +
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +    +Y  MLS+ + P+   +N L  G  +   ++ A     EM   G      +Y   
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           I  L K     EA  LF  +R  +   +   YN  ID       LE  L L
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLAL 727



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 151/300 (50%), Gaps = 6/300 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+++  F+V  ++++   TP+ VT+T+L  GLC +  +  A  L  ++   G E ++FT
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+NGLC+  +   A+    +M     E G+  +P+  TYTTII  LC+   +D+A  
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDM----DEAGL--KPDVYTYTTIIGALCQSKELDRAHS 551

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M DK IKP +VTY  ++ GFC +      KRL   M+++ + PN  T+N +M + C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
               M   + +   M+   V P+  TYN L+ G C    +  A      M   G + T  
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           SY+ LI    K K+   A  L+ +M    +  +  ++N      F    +E    L DE+
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 166/343 (48%), Gaps = 11/343 (3%)

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LLL+++   I P+  +  +V+   C     +EA +LF E+ ++    N  ++N+++  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELPEK----NTCSYNILLKALC 264

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G++ +A +L D M      PD  TY  ++ G+C    +  A +L   M + G +    
Sbjct: 265 TAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I   C   ++  A+ +  +M+  G+  D  +  T+  G      +  A   FDEM
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           Q+ G+AAD  TY   I+GLC+ G + EA  +   +     + D   Y  LIDG CK G++
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  +   +    + PNVVTY+ +  GLC  G +  A +L  +M    +  N+ T++ L
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           I G  +     + +  +  M E  + PD    + ++  L +++
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 218/461 (47%), Gaps = 19/461 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I + C+ P    F SLI   C       A  L  K+   GC+P    Y  L+ G+C  + 
Sbjct: 361 ITEGCY-PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC-GNE 418

Query: 74  TIVALNLFEEMANGNGE-FGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
            + +L++ E      GE        N V  + +   LC  G  +KA  ++ +M  K   P
Sbjct: 419 KLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP 478

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +  TY+ VI   C A   + A  LF EM    V P+V T+ +++D  CK G + +A +  
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M++ G  P+  TY  L+  +    +++ A ELF  M S GC   V +Y+ LI+G+CK+
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598

Query: 253 KEIEGALSLYSEMLSKGIKPDV----------------VIHNTLFVGLFEIHQVERAFKL 296
            +IE A  +Y+ M      PDV                  +  L  GL + H+V+ A  L
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            D M   G   +   Y   IDG CK G + EA  +F  +       ++  Y+SLID L K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
             RL++AL++   +      PNV+ Y+ MI GLC  G+ D+A  L   MEE    PNV+T
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +  +I GF +  +  K +EL+ +M      P+     ++++
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 217/423 (51%), Gaps = 16/423 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+ VT+T+LI       ++  A  LF  +   GC P+V TYT L++G C++     A  
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 80  LFEEMANGNGEF-----------GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           ++  M  GN +            G + +PN  TY  ++DGLCK   V +A++LL  M  +
Sbjct: 607 IYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             +PN + Y ++I GFC     +EA+ +F +M ++G  PNV T++ ++D L K+ ++D A
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            ++L  M+++   P+   Y  ++DG C  G+ + A  L   ME  GC   V +Y+ +I+G
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           + K  +++  L L  +M +KG  P+ V +  L         ++ A +L DEM++      
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
              YR  I+G   N   + ++ L   +        I AY  LID  CK+GRLE+ALEL +
Sbjct: 846 MAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHK 903

Query: 369 SLPC--GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            +         +   YS +I  L    ++DKA +L+ DM +   +P +  F  L++G IR
Sbjct: 904 XMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963

Query: 427 INE 429
           IN 
Sbjct: 964 INR 966



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 234/509 (45%), Gaps = 63/509 (12%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY-------- 61
            L  I K  F  D V +T +I GLC  S   EA    +++R   C P+V TY        
Sbjct: 286 ALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345

Query: 62  ---------------------------TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
                                       +L++  CR+     A  L ++M    G+ G  
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG-- 399

Query: 95  CEPNTVTYTTIIDGLCKE------GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           C+P  V Y  +I G+C          ++ A++   +M D ++  N V  +++ R  C A 
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            + +A  +  EMM +G  P+  T++ ++  LC   K+D A  L + M  + V PD FTY 
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+D FC  G +  A++ F  M   GC   V +Y+ LI+ Y K +++  A  L+  MLS+
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT----------------WTY 312
           G  P+VV +  L  G  +  Q+E+A +++  M+ N    D                 +TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
              +DGLCK   + EA +L   + +  CE +   Y++LIDG CK G+L+ A  +F  +  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               PNV TYS +I  L  D ++D A  +   M EN+  PNVI +  +I G  ++ +  +
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAK 461
              L+  M+E    P+    + ++D   K
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGK 788



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 217/455 (47%), Gaps = 24/455 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+    + ++  ++   F PD  T++ +I  LC  S++  A  LF +++     PDVFTY
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++  C+      A   F+EM          C PN VTYT +I    K   +  A EL
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDG------CAPNVVTYTALIHAYLKARKMSSANEL 572

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM--------------MDQG--V 165
              M  +   PNVVTYT++I G C +    +A +++  M              +D G   
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN+ T+  ++D LCK  K+ EA  LLD+M   G  P+   Y+ L+DGFC  G+++ A+ 
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F  M   G    V++YS LI+   K+K ++ AL + S ML     P+V+I+  +  GL 
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           ++ + + A++L   M+  G   +  TY   IDG  K G + + +EL   +    C  +  
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y  LI+  C +G L+ A +L   +       ++  Y  +I G   + +   +  L  ++
Sbjct: 813 TYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEI 870

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            EN  VP +  + +LI  F +       +EL   M
Sbjct: 871 AENVAVPIIPAYRILIDSFCKAGRLELALELHKXM 905



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 216/483 (44%), Gaps = 31/483 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   ++V   +  S F  D  T    +  LC   R  EA AL  K      + D   YT
Sbjct: 247 RLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYT 303

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++GLC  S    A++    M + +      C PN VTY  ++ G  ++  + + K +L
Sbjct: 304 QMISGLCEASLFEEAMDFLSRMRSSS------CIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  +   P+   + S+I  +C + D++ A +L  +M D G QP  V +N+++  +C N
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 183 GKMDE------ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
            K+        A +    M+   V  +    + L    C  G+   A  +   M S G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +YS +I   C   +++ A  L+ EM S  + PDV  +  L     ++  +++A K 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           FDEM R+G A +  TY   I    K   +  A ELF  +    C  ++  Y +LIDG CK
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 357 SGRLEIALELFRSLPCGVLVP----------------NVVTYSIMIGGLCNDGQMDKARD 400
           SG++E A +++  +     +P                N+ TY  ++ GLC   ++ +ARD
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L   M      PN I +D LI GF ++ +  +   +  KM E    P+    S ++D L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 461 KNE 463
           K++
Sbjct: 718 KDK 720



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 205/490 (41%), Gaps = 66/490 (13%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           LI+  C       A     +L+  G +P   TY  LV           A  +  EM++  
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                    +  T    +  LCK G   + +E L  ++ +  K + V YT +I G C A 
Sbjct: 263 FNM------DGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEAS 313

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            + EA      M      PNVVT+ +++    +  ++    R+L +MI  G  P    +N
Sbjct: 314 LFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN 373

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI------------- 255
           +L+  +C +G  ++A +L   M   GC+     Y+ILI G C N+++             
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433

Query: 256 ----------------------------EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
                                       E A S+  EM+SKG  PD   ++ +   L   
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            +V+ AF LF+EM+ N V  D +TY   ID  CK G + +A + F  +    C  ++  Y
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +LI    K+ ++  A ELF  +     +PNVVTY+ +I G C  GQ++KA  ++  M  
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 408 NAVV----------------PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           NA +                PN+ T+  L+ G  + ++  +  +LL  M      P+  +
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 452 VSIVVDLLAK 461
              ++D   K
Sbjct: 674 YDALIDGFCK 683



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 18/296 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++    +V  ++ +  + P+  T++SLI  L  + R+  A  + +++    C P+V  
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++GLC+   T  A  L   M          C PN VTYT +IDG  K G VDK  E
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKG------CHPNVVTYTAMIDGFGKAGKVDKCLE 797

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+ QM  K   PN VTY  +I   C A   ++A +L  EM       ++  +  +++   
Sbjct: 798 LMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF- 856

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            N +   +  LLD + ++   P    Y  L+D FC  GR+  A EL   M S     T +
Sbjct: 857 -NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSC----TSY 911

Query: 241 S------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
           S      YS LI       +++ A  LY++M+ +G  P++ I   L  GL  I++ 
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRT 967



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 144/384 (37%), Gaps = 83/384 (21%)

Query: 172 FNVIMDELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
            NV++ + C+NG     ++E  RL DL    G +P   TYN L+  F    R++ A  + 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDL----GYKPSRLTYNALVRVFLEADRLDTAYLVH 255

Query: 228 VSME---------SMGC-----------------------KHTVFSYSILINGYCKNKEI 255
             M          ++GC                       K     Y+ +I+G C+    
Sbjct: 256 REMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E A+   S M S    P+VV +  L  G     Q+ R  ++   M   G       + + 
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG---------------------- 353
           I   C++G    A +L   +    C+     YN LI G                      
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435

Query: 354 -------------------LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                              LC +G+ E A  + R +     +P+  TYS +IG LCN  +
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D A  LF +M+ N VVP+V T+ +LI  F ++    +  +   +M      P+    + 
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 455 VVD--LLAKNEISLNSLPSFTVHE 476
           ++   L A+   S N L    + E
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSE 579



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 11/241 (4%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++LI   C+N     AL     +   G KP  + +N L     E  +++ A+ +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRL 360
           +G   D +T   F+  LCK G   EA+ L     I K EF  D   Y  +I GLC++   
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL-----IEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A++    +     +PNVVTY I++ G     Q+ + + +   M      P+   F+ L
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           I  + R  + S   +LL KM +    P   + +I++  +  NE     LPS  V E  E+
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE----KLPSLDVLELAEK 431

Query: 481 V 481
            
Sbjct: 432 A 432


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 229/447 (51%), Gaps = 12/447 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +  ++L+    P+ VT+  L+ GLC   R+ E  AL  ++  +   PD FTY
Sbjct: 244 GDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTY 303

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L +GL RT  +   L+LF E      + GV+      T + +++GLCK+G V KA+++
Sbjct: 304 SILFDGLTRTGDSRTMLSLFGESL----KKGVII--GAYTCSILLNGLCKDGKVAKAEQV 357

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  +    + P    Y ++I G+C  +D   A  +F +M  + ++P+ +T+N +++ LCK
Sbjct: 358 LEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK 417

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + EA  L+  M + GV P   T+NTL+D +   G++     +   M+  G K  V S
Sbjct: 418 MEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVIS 477

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +  ++  +CKN +I  A+++  +M+ K + P+  ++N++     E    E+AF L ++M+
Sbjct: 478 FGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMK 537

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +GV+A  +TY   + GLCKN  I EA EL + L       D+ +YN++I   C  G  +
Sbjct: 538 SSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTD 597

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALEL + +    + P + TY  ++  L + G++     L+  M    V P+   +    
Sbjct: 598 RALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYG--- 654

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
               R    SKV  L  +M E  +  D
Sbjct: 655 ---TRCENESKVASLKKEMSEKGIAFD 678



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 232/484 (47%), Gaps = 43/484 (8%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEP-DV 58
           +GR +      G ++ +   PD   +   ++   A   + EA A+  ++ R  G  P D 
Sbjct: 136 VGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDA 195

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           F+Y  ++ GL R+     AL +F+EM     + GV   PN +TY T+IDG  K G ++  
Sbjct: 196 FSYNVVIAGLWRSGKGSDALKVFDEMV----DRGVA--PNQITYNTMIDGHVKGGDLEAG 249

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD- 177
             L  QM     KPNVVTY  ++ G C A   +E + L  EM    + P+  T++++ D 
Sbjct: 250 FRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDG 309

Query: 178 ----------------------------------ELCKNGKMDEASRLLDLMIQHGVRPD 203
                                              LCK+GK+ +A ++L++++  G+ P 
Sbjct: 310 LTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 369

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
              YNTL++G+C    +  A  +F  M+S   +    +Y+ LING CK + I  A  L  
Sbjct: 370 TAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVM 429

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM   G+ P V   NTL        Q+E+ F +  +MQ  G+ ++  ++ + +   CKNG
Sbjct: 430 EMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNG 489

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            I EAV +   +       + + YNS+ID   +SG  E A  L   +    +  ++ TY+
Sbjct: 490 KIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYN 549

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           +++ GLC + Q+D+A +L  ++    + P+V++++ +I       +  + +ELL +M + 
Sbjct: 550 LLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKY 609

Query: 444 NVMP 447
           ++ P
Sbjct: 610 DIRP 613



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 206/434 (47%), Gaps = 4/434 (0%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L++ L +  R  +  A F  L   G  PD F +   V           AL +   M    
Sbjct: 129 LLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSE 188

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           G       P+  +Y  +I GL + G    A ++  +M D+ + PN +TY ++I G     
Sbjct: 189 G----APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGG 244

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
           D     RL  +M+  G +PNVVT+NV++  LC+ G+MDE   L+D M  + + PD FTY+
Sbjct: 245 DLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYS 304

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L DG   TG       LF      G     ++ SIL+NG CK+ ++  A  +   ++  
Sbjct: 305 ILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHT 364

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G+ P   I+NTL  G  ++  ++ AF +F++M+   +  D  TY   I+GLCK   I EA
Sbjct: 365 GLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEA 424

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            +L   +     +  +  +N+LID   ++G+LE    +   +    +  NV+++  ++  
Sbjct: 425 EDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKA 484

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C +G++ +A  +  DM    VVPN   ++ +I  +I      +   L+ KMK   V   
Sbjct: 485 FCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSAS 544

Query: 449 ASIVSIVVDLLAKN 462
               ++++  L KN
Sbjct: 545 IFTYNLLLKGLCKN 558



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 149/301 (49%), Gaps = 4/301 (1%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P++ + N++++ L   G+  +      L++  G RPD F +N  +      G ++ A  +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 227 FVSM-ESMGCKHT-VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
              M  S G      FSY+++I G  ++ +   AL ++ EM+ +G+ P+ + +NT+  G 
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +   +E  F+L D+M ++G   +  TY   + GLC+ G + E   L   +       D 
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 345 RAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
             Y+ L DGL ++G     L LF  SL  GV++    T SI++ GLC DG++ KA  +  
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVII-GAYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +    +VP    ++ LI G+ ++ +      +  +MK  ++ PD    + +++ L K E
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME 419

Query: 464 I 464
           +
Sbjct: 420 M 420



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P +   N L   L  + +       F  +   G   DT+ +   +      G + EA+ +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 332 FHTLRILKCEF----DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
               R+ + E     D  +YN +I GL +SG+   AL++F  +    + PN +TY+ MI 
Sbjct: 181 LR--RMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMID 238

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           G    G ++    L   M ++   PNV+T+++L+ G  R     +   L+ +M   +++P
Sbjct: 239 GHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLP 298

Query: 448 DASIVSIVVDLLAKNEISLNSLPSF 472
           D    SI+ D L +   S   L  F
Sbjct: 299 DGFTYSILFDGLTRTGDSRTMLSLF 323


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 243/483 (50%), Gaps = 42/483 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  S+  +V   I +    PD  T + ++   C +  +  A     ++   G E +V TY
Sbjct: 197 GESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTY 256

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++G         A  + + M    GE G++   N VT T +I G C++  +++A+++
Sbjct: 257 NSLIDGCVSIGDMERAEMVLKLM----GERGIL--RNKVTLTLLIKGYCRQCKLEEAEKV 310

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L +M + + +  +   Y  +I G+C     ++A RL  EM++ G++ N+   N +++  C
Sbjct: 311 LREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYC 370

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG++ EA RLL  M+   + P++++Y+TL+DGFC  G V  A  ++  M  +G +  V 
Sbjct: 371 KNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVV 430

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ L+ G C+    E AL ++  ML +G+ PD V + TL   LF++ +  RA  L++++
Sbjct: 431 THNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDI 490

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G    T+ + T I+G CK   ++EA E F+ ++ L  E D   Y +LIDG CK G +
Sbjct: 491 LARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNV 550

Query: 361 EIA---------------LELFRSLPCGV--------------------LVPNVVTYSIM 385
           E A               +EL+ SL  G+                    L PNVVTY  +
Sbjct: 551 EEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTL 610

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I G C++G++DKA   + DM E    PNVI    ++    R+    +   LL KM  ++V
Sbjct: 611 IAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDV 670

Query: 446 MPD 448
             D
Sbjct: 671 FLD 673



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 232/456 (50%), Gaps = 14/456 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG       +   IL   +      F ++I G C   +++EA   F +++  G EPD  T
Sbjct: 477 MGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVT 536

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G C+  +   A  + E+M            P+   Y ++I GL K     +  +
Sbjct: 537 YRTLIDGYCKLGNVEEAFKVKEKMEKE------AILPSIELYNSLIGGLFKSKKTREVMD 590

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  K + PNVVTY ++I G+C     ++A   + +M+++G  PNV+  + I+  L 
Sbjct: 591 LLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLY 650

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLL---DGFCLTGRVNHAKELFVSMESMGCKH 237
           + G++DEA+ LL  M+   V  D   ++ L    DG   + ++  A  L  S +S    +
Sbjct: 651 RLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKI--ADTLDESSKSFSLPN 708

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           +V  Y+I I G CK+ +++ A  ++S +L +G  PD   + TL  G      V  AF L 
Sbjct: 709 SVV-YNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLR 767

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           DEM + G+A +  TY   I+GLCK+G +  A +LF  L +     ++ +YN LIDG CK+
Sbjct: 768 DEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKN 827

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           G    AL+L   +    + P+++TYS +I G C  G M KA +L  +M E     N+  F
Sbjct: 828 GNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKF 887

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
             L+ G ++  E  K+ + LH M  I + P A ++S
Sbjct: 888 VKLVEGHVKCGEVKKIAK-LHNMMHITI-PCAGVIS 921



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 236/490 (48%), Gaps = 41/490 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+VS    +L R++     P++ ++++L+ G C E  + +A +++ ++   G + +V T+
Sbjct: 373 GQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTH 432

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ GLCR      AL+++  M     + GV   P+ V+Y T++D L K G   +A  L
Sbjct: 433 NSLLKGLCRVGAFEDALHVWHLML----KRGVT--PDEVSYCTLLDLLFKMGEFFRALAL 486

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  +    +   + ++I GFC  +   EA+  F  M + G +P+ VT+  ++D  CK
Sbjct: 487 WNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCK 546

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++EA ++ + M +  + P    YN+L+ G   + +     +L   M   G    V +
Sbjct: 547 LGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVT 606

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF---- 297
           Y  LI G+C    ++ A + Y +M+ KG  P+V+I + +   L+ + +++ A  L     
Sbjct: 607 YGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 666

Query: 298 -------------------------------DEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
                                          DE  ++    ++  Y   I GLCK+G + 
Sbjct: 667 NLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVD 726

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A ++F +L +     D   Y +LI G   +G +  A  L   +    L PN++TY+ +I
Sbjct: 727 DAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALI 786

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC  G +D+A+ LF  +    + PNVI++++LI G+ +     + ++L +KM +  + 
Sbjct: 787 NGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGIS 846

Query: 447 PDASIVSIVV 456
           P     S ++
Sbjct: 847 PSLITYSALI 856



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 226/446 (50%), Gaps = 9/446 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+P    F  ++K  C +  I  A  +F  +   GC P + +   L++ L R   +  A+
Sbjct: 146 FSP--TVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAI 203

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            +++ +       G+V  P+  T + +++  CK+G+V+ A + + +M     + NVVTY 
Sbjct: 204 LVYDHI----NRLGIV--PDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYN 257

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ- 197
           S+I G     D   A+ +   M ++G+  N VT  +++   C+  K++EA ++L  M + 
Sbjct: 258 SLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERS 317

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+  D + Y  L+DG+C   +++ A  L   M ++G +  +F  + LINGYCKN ++  
Sbjct: 318 EGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSE 377

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L   M+   ++P+   ++TL  G      V +A  +++EM R G+ ++  T+ + + 
Sbjct: 378 AERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLK 437

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLC+ G   +A+ ++H +       D  +Y +L+D L K G    AL L+  +       
Sbjct: 438 GLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGR 497

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +   ++ MI G C   +M +A + F  M+E    P+ +T+  LI G+ ++    +  ++ 
Sbjct: 498 STYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVK 557

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNE 463
            KM++  ++P   + + ++  L K++
Sbjct: 558 EKMEKEAILPSIELYNSLIGGLFKSK 583



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 181/402 (45%), Gaps = 41/402 (10%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F PD VT+ +LI G C    + EA  +  K+      P +  Y +L+ GL ++  T   +
Sbjct: 530 FEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVM 589

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L  EM            PN VTY T+I G C EG +DKA      M +K   PNV+  +
Sbjct: 590 DLLSEMCLKG------LSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICS 643

Query: 139 SVIRGFCYAKDWNEAKRLFIEM------MDQGV--------------------------- 165
            ++         +EA  L  +M      +D G                            
Sbjct: 644 KIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKS 703

Query: 166 --QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
              PN V +N+ +  LCK+GK+D+A ++   ++  G  PD FTY TL+ G+   G VN A
Sbjct: 704 FSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDA 763

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             L   M   G    + +Y+ LING CK+  ++ A  L+ ++  KG+ P+V+ +N L  G
Sbjct: 764 FSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDG 823

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
             +      A  L ++M + G++    TY   I G CK G + +A  L   +R L  + +
Sbjct: 824 YCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQN 883

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
           I  +  L++G  K G ++   +L   +   +    V+++  M
Sbjct: 884 IAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCAGVISHKQM 925



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 214/432 (49%), Gaps = 16/432 (3%)

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
           F   P VF    ++   C       AL++F+ M    G+ G  C P+  +   ++  L +
Sbjct: 144 FKFSPTVFD--MILKIYCEKGMIKNALHVFDNM----GKLG--CVPSLRSCNRLLSSLVR 195

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD-WNEAKRLFIEMMDQ-GVQPNV 169
           +G    A  +   +    I P+V T + ++  +C  KD W      F++ MD  G + NV
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYC--KDGWVNVAVDFVKEMDYLGFELNV 253

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           VT+N ++D     G M+ A  +L LM + G+  +  T   L+ G+C   ++  A+++   
Sbjct: 254 VTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLRE 313

Query: 230 ME-SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
           ME S G     ++Y +LI+GYC+  +++ A+ L  EML+ G++ ++ I N L  G  +  
Sbjct: 314 MERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNG 373

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           QV  A +L   M    +  ++++Y T +DG C+ G + +A+ +++ +  +  + ++  +N
Sbjct: 374 QVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHN 433

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           SL+ GLC+ G  E AL ++  +    + P+ V+Y  ++  L   G+  +A  L+ D+   
Sbjct: 434 SLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILAR 493

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
               +   F+ +I GF ++ +  +  E  ++MKE+   PD      ++D   K     N 
Sbjct: 494 GYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLG---NV 550

Query: 469 LPSFTVHEQQEE 480
             +F V E+ E+
Sbjct: 551 EEAFKVKEKMEK 562



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 188/425 (44%), Gaps = 57/425 (13%)

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           + I +L+ F+ +A+    F     PN  ++  ++  L +    D+ +  L ++    + P
Sbjct: 73  NPIASLHFFK-LASKQSNF----RPNVNSHCKLVHILSRARMYDETRSYLNEL----VTP 123

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +   Y+S++        WNE  R+F    D    P V  F++I+   C+ G +  A  + 
Sbjct: 124 SKNNYSSLVV-------WNELVRVF---EDFKFSPTV--FDMILKIYCEKGMIKNALHVF 171

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M + G  P   + N LL      G  ++A  ++  +  +G    VF+ SI++N YCK+
Sbjct: 172 DNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKD 231

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER-------------------- 292
             +  A+    EM   G + +VV +N+L  G   I  +ER                    
Sbjct: 232 GWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTL 291

Query: 293 ---------------AFKLFDEMQRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
                          A K+  EM+R+ G+  D + Y   IDG C+   + +AV L   + 
Sbjct: 292 TLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEML 351

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
            +    ++   N+LI+G CK+G++  A  L   +    L P   +YS ++ G C +G + 
Sbjct: 352 NVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVT 411

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           KA  ++ +M    +  NV+T + L++G  R+      + + H M +  V PD      ++
Sbjct: 412 KAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLL 471

Query: 457 DLLAK 461
           DLL K
Sbjct: 472 DLLFK 476



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 17/298 (5%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +PNV +   ++  L +    DE    L+ +    V P    Y++L+             E
Sbjct: 91  RPNVNSHCKLVHILSRARMYDETRSYLNEL----VTPSKNNYSSLV----------VWNE 136

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L    E      TVF   +++  YC+   I+ AL ++  M   G  P +   N L   L 
Sbjct: 137 LVRVFEDFKFSPTVFD--MILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLV 194

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              +   A  ++D + R G+  D +T    ++  CK+G++  AV+    +  L  E ++ 
Sbjct: 195 RKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVV 254

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YNSLIDG    G +E A  + + +    ++ N VT +++I G C   ++++A  +  +M
Sbjct: 255 TYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREM 314

Query: 406 EEN-AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           E +  +V +   + +LI G+ R+ +    + L  +M  + +  +  I + +++   KN
Sbjct: 315 ERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKN 372


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 222/443 (50%), Gaps = 10/443 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           DA  F  +++ L     + +A  +F  ++   C P + TY  L+N  C       AL+LF
Sbjct: 11  DAYDF--VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLF 68

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + M           EP+  TY T+I GLC  G  + A++LL +M+DKNI  NV TY+S+I
Sbjct: 69  QSMKREK-----RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSII 123

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +         E+ ++  EMM  G  P+V  FN +M    ++  M++A  +   M++ G +
Sbjct: 124 KSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYK 183

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELF--VSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           PD  +Y+ L+ G    G+++ + ++   ++M + G    V ++S LI+G C+  E+E AL
Sbjct: 184 PDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 243

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++  ML  G KP+   + TL  GL    +V +A +LF++M +  +  D   Y + I G 
Sbjct: 244 EVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGY 303

Query: 320 CKNGYIVEAVELFHTLR-ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           CK G + EA +L+  +      +  I  +N+LIDG CK G+L  A EL   +    L  +
Sbjct: 304 CKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAAD 363

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
             TY I+I GL    ++D+A +++  M E   + + ++    + G  +     +   +  
Sbjct: 364 TCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFE 423

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
             ++   +P+     I+ + L K
Sbjct: 424 ATRKSGAVPNPETFRILSESLIK 446



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 224/434 (51%), Gaps = 11/434 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHT 74
           +SC  P  VT+  LI   C      +A  LF  + R    EPD +TY TL++GLC + +T
Sbjct: 39  ESC-VPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNT 97

Query: 75  IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
             A  L  EM + N         N  TY++II  L KE   +++ ++L +M      P+V
Sbjct: 98  EGARKLLSEMRDKN------IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDV 151

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
             +  V++GF  + +  +A+ ++  M++ G +P+ V++++++  L K GK+DE+ ++L  
Sbjct: 152 FAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSE 211

Query: 195 MIQH--GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           M     G  P+  T++TL+ G C TG +  A E+F SM   GCK   ++Y+ LI G C+ 
Sbjct: 212 MAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRA 271

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN-GVAADTWT 311
           +++  A  L+ +M    I PD V +N+L  G  +   ++ A KL+ EM    G+     T
Sbjct: 272 EKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVT 331

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           + T IDG CK G +  A EL   +       D   Y  LI GL ++ +L+ ALE+++ + 
Sbjct: 332 FNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMR 391

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
               + + V+    +GGLC  G +D+A  +F    ++  VPN  TF +L    I++    
Sbjct: 392 EKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVE 451

Query: 432 KVIELLHKMKEINV 445
              +L+   K  ++
Sbjct: 452 DAQKLMEPAKARDI 465



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 173/336 (51%), Gaps = 5/336 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            +    + VL  ++ +   PD   F  +++G    + + +A  ++  +   G +PD  +Y
Sbjct: 130 AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY 189

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++GL +      +L +  EMA      G V  PN +T++T+I GLC+ G ++KA E+
Sbjct: 190 HILIHGLAKIGKLDESLKILSEMAMRAA--GYV--PNVITFSTLIHGLCRTGELEKALEV 245

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M +   KPN  TYT++I G C A+   +A+ LF +M    + P+ V +N ++   CK
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305

Query: 182 NGKMDEASRLLDLMI-QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            G MDEA +L   M    G++P   T+NTL+DGFC  G++  A EL   M + G      
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC 365

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y ILI G  +  +++ AL +Y +M  K    D V   +   GL +   +++A+ +F+  
Sbjct: 366 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEAT 425

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +++G   +  T+R   + L K G + +A +L    +
Sbjct: 426 RKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 461



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 19/278 (6%)

Query: 6   HGFVVLGRILKSC------------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 53
           HG   +G++ +S             + P+ +TF++LI GLC    + +A  +F  +   G
Sbjct: 194 HGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG 253

Query: 54  CEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG 113
           C+P+ +TYTTL+ GLCR    I A  LFE+M            P+ V Y ++I G CK G
Sbjct: 254 CKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ------ACIPPDAVAYNSLIAGYCKRG 307

Query: 114 FVDKAKELLLQMK-DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
            +D+A++L  +M     ++P +VT+ ++I GFC       A  L  EM  +G+  +  T+
Sbjct: 308 SMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTY 367

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
            +++  L +  K+DEA  +   M +     D  +  + + G C TG ++ A  +F +   
Sbjct: 368 RILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRK 427

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
            G      ++ IL     K   +E A  L     ++ I
Sbjct: 428 SGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 130/261 (49%), Gaps = 3/261 (1%)

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            Y+ ++      G +  A E+F +M+S  C  ++ +Y++LIN  C   E   AL L+  M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 266 -LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
              K ++PD   +NTL  GL      E A KL  EM+   +AA+ +TY + I  L K   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
             E+ ++   +    C  D+ A+N ++ G  +S  +E A E+++ +      P+ V+Y I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAV--VPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           +I GL   G++D++  +  +M   A   VPNVITF  LI G  R  E  K +E+   M E
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 443 INVMPDASIVSIVVDLLAKNE 463
               P+    + ++  L + E
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAE 272



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 1/124 (0%)

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
           KC     AY+ ++  L K+G L  ALE+F ++     VP++VTY+++I   CN G+  KA
Sbjct: 5   KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKA 64

Query: 399 RDLFLDME-ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            DLF  M+ E  V P+  T++ LI G           +LL +M++ N+  +    S ++ 
Sbjct: 65  LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIK 124

Query: 458 LLAK 461
            L K
Sbjct: 125 SLVK 128


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 222/447 (49%), Gaps = 19/447 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++    VLG   ++    + VT+T+LI G C   R+ +A  L   + V    PD +TY
Sbjct: 138 GRLADAERVLG-AARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPV---APDTYTY 193

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ GLC      +A    E            C PN VT+ T I   C+ G +D+A +L
Sbjct: 194 NTVLKGLC------IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 247

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM      P+VV Y+++I GF      ++A  L   M+    +PN V +N  +  LC 
Sbjct: 248 LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCI 304

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             + ++   L+  M++ G  P+  T++ L+   C    V+ A E+   ME  GC+    +
Sbjct: 305 AERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVN 364

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+IN   +   ++ AL L + M+    KPD +  N +  G     +   A +L  +M 
Sbjct: 365 YNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMF 421

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R+       T+   ID LC+NG +  A ++F  +   +C  DI  Y+SL++G  + G +E
Sbjct: 422 RDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVE 481

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A++LFRS+PC    P++ +Y+ ++ GLC   + + A +L  +M      PN +TF++LI
Sbjct: 482 VAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILI 538

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
               +     + IE+L +M      PD
Sbjct: 539 NSLCQKGLVDRAIEVLEQMPNYGSTPD 565



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 223/430 (51%), Gaps = 18/430 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD  T+ +++KGLC   +  EA  L  ++    C P+  T+ T +   C+      A+ 
Sbjct: 187 APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 246

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L ++M      +G  C P+ V Y+T+I+G  ++G VD+A +LL  M     KPN V Y +
Sbjct: 247 LLDQMP----RYG--CTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 297

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            ++G C A+ W +   L  EM+ +G  PN  TF++++  LC+N  +D A  +L+ M ++G
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   YN +++     GRV+ A  L   + SM CK     ++ ++ G+C+ +    A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDALGFNAVLKGFCRAERWHDAS 414

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L ++M         +  N L   L +   V  A ++F++M R     D  TY + ++G 
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G +  A++LF   R + C+ DI +YN+++ GLC++ R E A EL   +      PN 
Sbjct: 475 SEQGLVEVAIQLF---RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++I+I  LC  G +D+A ++   M      P++ T++ LI GF   +E  ++ + L  
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF---SEQGRLDDALKL 588

Query: 440 MKEINVMPDA 449
           +  ++  PDA
Sbjct: 589 LSTMSCKPDA 598



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 202/432 (46%), Gaps = 53/432 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTF + I+  C    +  A  L  ++  +GC PDV  Y+TL+NG     H   AL+L
Sbjct: 223 PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 282

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M         +C+PNTV Y   + GLC     +   EL+ +M  K   PN  T++ +
Sbjct: 283 LNTM---------LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSML 333

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C     + A  +  +M   G +P+ V +N+I++ L + G++D+A RLL+ M+    
Sbjct: 334 ISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---C 390

Query: 201 RPDAFTYNTLLDGFCLTGR-----------------------------------VNHAKE 225
           +PDA  +N +L GFC   R                                   VN+A +
Sbjct: 391 KPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQ 450

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F  M    C   + +YS L+NG+ +   +E A+ L+  M     KPD+  +N +  GL 
Sbjct: 451 VFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLC 507

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              + E A +L  EM       +  T+   I+ LC+ G +  A+E+   +       DI 
Sbjct: 508 RAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIF 567

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YN+LI+G  + GRL+ AL+L  ++ C    P+ ++Y+  + GLC   +   A +L  +M
Sbjct: 568 TYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEM 624

Query: 406 EENAVVPNVITF 417
             N   PN +TF
Sbjct: 625 LRNKCTPNEVTF 636



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 204/381 (53%), Gaps = 18/381 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L  +L     P+ V + + +KGLC   R  +   L  ++   GC P+  T+
Sbjct: 274 GHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATF 330

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++ LC+ +    A+ + E+M     ++G  CEP+TV Y  II+ L + G VD A  L
Sbjct: 331 SMLISSLCQNNLVDSAVEVLEQME----KYG--CEPDTVNYNIIINSLSERGRVDDALRL 384

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M     KP+ + + +V++GFC A+ W++A  L  +M         +TFN+++D LC+
Sbjct: 385 LNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQ 441

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG ++ A+++ + M ++   PD  TY++LL+GF   G V  A +LF    SM CK  +FS
Sbjct: 442 NGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RSMPCKPDIFS 498

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++ G C+    E A  L +EM+ K   P+ V  N L   L +   V+RA ++ ++M 
Sbjct: 499 YNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMP 558

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D +TY   I+G  + G + +A++L  T+    C+ D  +YNS + GLC++ R +
Sbjct: 559 NYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQ 615

Query: 362 IALELFRSLPCGVLVPNVVTY 382
            A EL   +      PN VT+
Sbjct: 616 DAEELVAEMLRNKCTPNEVTF 636



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 155/292 (53%), Gaps = 8/292 (2%)

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           ++ N+++ +LC  G++ +A R+LD +       DA ++NTL+ G+C  GR+  A+ +  +
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
             + G  + V +Y+ LI+GYC++  ++ AL L + M    + PD   +NT+  GL    +
Sbjct: 150 ARATGAANVV-TYTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLCIAKK 205

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            E A +L  EM RN    +  T+ T I   C+NG +  AV+L   +    C  D+  Y++
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+G  + G ++ AL+L  ++ C    PN V Y+  + GLC   + +   +L  +M    
Sbjct: 266 LINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             PN  TF MLI    + N     +E+L +M++    PD    +I+++ L++
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSE 374


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 240/472 (50%), Gaps = 7/472 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+V     V   + K    P+  T+  LI  LC   ++  A  L   ++  G  P+V T
Sbjct: 356 MGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
              +V+ LC++     A  +FEEM         VC P+ +T+ ++IDGL K G VD A +
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYK------VCTPDEITFCSLIDGLGKVGRVDDAYK 468

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M D + + N + YTS+I+ F       +  +++ +M++Q   P++   N  MD + 
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+ ++   + + +      PDA +Y+ L+ G    G  N   ELF SM+  GC     
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+I+I+G+CK  ++  A  L  EM +KG +P VV + ++  GL +I +++ A+ LF+E 
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +   +  +   Y + IDG  K G I EA  +   L       ++  +NSL+D L K+  +
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL  F+S+      PN VTY I+I GLC   + +KA   + +M++  + P+ I++  +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           I G  +    ++   L  + K    +PD++  + +++ L+    ++++   F
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 230/464 (49%), Gaps = 9/464 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V   +     I  +   PD VT+TS+I  LC  +R+ EA  +F  L      P  + 
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310

Query: 61  YTTLVNGLCRTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y T++ G         A +L E + A G+        P+ + Y  I+  L K G VD+A 
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGS-------IPSVIAYNCILTCLRKMGKVDEAL 363

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           ++  +MK K+  PN+ TY  +I   C A   + A  L   M   G+ PNV T N+++D L
Sbjct: 364 KVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK+ K+DEA  + + M      PD  T+ +L+DG    GRV+ A +++  M    C+   
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+ LI  +  +   E    +Y +M+++   PD+ + NT    +F+  + E+   +F+E
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           ++      D  +Y   I GL K G+  E  ELF++++   C  D RAYN +IDG CK G+
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A +L   +      P VVTY  +I GL    ++D+A  LF + +   +  NV+ +  
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           LI GF ++    +   +L ++ +  + P+    + ++D L K E
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 239/488 (48%), Gaps = 30/488 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++  G+ V+  + K  F P    +T+LI    A +       LF +++  G EP V  +T
Sbjct: 148 KLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFT 207

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGN---------------GEFGVV------------- 94
           TL+ G  +      AL+L +EM + +               G+ G V             
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267

Query: 95  -CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
             +P+ VTYT++I  LCK   +D+A E+   ++     P    Y ++I G+  A  ++EA
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             L      +G  P+V+ +N I+  L K GK+DEA ++ + M +    P+  TYN L+D 
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDM 386

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C  G+++ A EL  SM+  G    V + +I+++  CK+++++ A +++ EM  K   PD
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            +   +L  GL ++ +V+ A+K++++M  +    ++  Y + I     +G   +  +++ 
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +    C  D++  N+ +D + K+G  E    +F  +     VP+  +YSI+I GL   G
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
             ++  +LF  M+E   V +   ++++I GF +  + +K  +LL +MK     P      
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626

Query: 454 IVVDLLAK 461
            V+D LAK
Sbjct: 627 SVIDGLAK 634



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 223/469 (47%), Gaps = 7/469 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +LG +  + F P   T   ++ G    +++ E   +   +R F   P    YTTL+    
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
             +H+ + L LF++M     E G   EP    +TT+I G  KEG VD A  LL +MK  +
Sbjct: 180 AVNHSDMMLTLFQQMQ----ELGY--EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +  ++V Y   I  F      + A + F E+   G++P+ VT+  ++  LCK  ++DEA 
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            + + + ++   P  + YNT++ G+   G+ + A  L     + G   +V +Y+ ++   
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  +++ AL ++ EM  K   P++  +N L   L    +++ AF+L D MQ+ G+  + 
Sbjct: 354 RKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNV 412

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            T    +D LCK+  + EA  +F  +    C  D   + SLIDGL K GR++ A +++  
Sbjct: 413 RTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEK 472

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +       N + Y+ +I    N G+ +    ++ DM      P++   +  +    +  E
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           P K   +  ++K    +PDA   SI++  L K   +  +   F   ++Q
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 159/335 (47%), Gaps = 6/335 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    G  +   I    F PDA +++ LI GL       E   LF  ++  GC  D   Y
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C+      A  L EEM           EP  VTY ++IDGL K   +D+A  L
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKG------FEPTVVTYGSVIDGLAKIDRLDEAYML 644

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + K K I+ NVV Y+S+I GF      +EA  +  E+M +G+ PN+ T+N ++D L K
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA      M +    P+  TY  L++G C   + N A   +  M+  G K +  S
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K   I  A +L+    + G  PD   +N +  GL   ++   AF LF+E +
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           R G+     T    +D L KN  + +A  +   LR
Sbjct: 825 RRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 231/468 (49%), Gaps = 13/468 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA +F +L+ G C E R  EA AL   +   G   D  T T +V   CR         L
Sbjct: 179 PDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGL 238

Query: 81  FEEMAN-GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           F  M   GN        PN V YT  +DGLCK G+V +A  +L +M  K +KPNV T+TS
Sbjct: 239 FGRMVEMGN-------PPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTS 291

Query: 140 VIRGFCYAKDWNE-AKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           +I G C    W E A RLF++++     +PNV T+ V++   CK GK+  A  LL  M++
Sbjct: 292 LIDGLCKI-GWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVE 350

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ P+  TY TL+DG C  G  + A EL   M+  G    +++Y+ +I G+CK  +I+ 
Sbjct: 351 QGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQ 410

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  +     S+G+ PD V +  L     +   +  A  LF++M  N    D  TY T I 
Sbjct: 411 AYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIA 470

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
             C+   + ++ +LF     +      + Y S+I G C+ G+   AL++F  +     +P
Sbjct: 471 MYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLP 530

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + +TY  +I GLC + ++++AR LF  M +  +VP  +T   L   + R ++ +  +  L
Sbjct: 531 DPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFL 590

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESN 485
             + +      A   ++V  L A + +   SL    V ++   VD + 
Sbjct: 591 DGLDKRQQAHAAD--ALVRKLSAVDNLDAASLFLKNVLDKHYAVDHAT 636



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 199/381 (52%), Gaps = 7/381 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +L  + +  F+ D+ T T +++  C + R  +   LF ++   G  P+V  Y
Sbjct: 195 GRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNY 254

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T  V+GLC+  +   A ++ EEM  G G      +PN  T+T++IDGLCK G+ ++A  L
Sbjct: 255 TAWVDGLCKRGYVKQAFHVLEEMV-GKG-----LKPNVYTHTSLIDGLCKIGWTERAFRL 308

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L++ K  + KPNV TYT +I G+C       A+ L   M++QG+ PN  T+  ++D  C
Sbjct: 309 FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHC 368

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G  D A  L++ M   G  P+ +TYN ++ GFC  G++  A ++     S G      
Sbjct: 369 RGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKV 428

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++LI  +CK   I  AL L+++M      PD+  + T+     +  Q+E++ +LFD+ 
Sbjct: 429 TYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKC 488

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     TY + I G C+ G    A+++F  +    C  D   Y +LI GLCK  RL
Sbjct: 489 LSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRL 548

Query: 361 EIALELFRSLPCGVLVPNVVT 381
           E A  LF ++    +VP  VT
Sbjct: 549 EEARALFETMLDKHMVPCDVT 569



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 208/427 (48%), Gaps = 11/427 (2%)

Query: 37  SRIMEAAALFTKLRVFGCEPDVFTYTTLVN-GLCRTSHTIVALNLFEEMANGNGEFGVVC 95
           +R+ EA  +  +LR  G    V T   ++  GL +  H   A   F+ M       GV  
Sbjct: 127 NRLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM-------GV-- 177

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
            P+  ++  ++ G C+EG  ++A  LL  M  +    +  T T V+R FC    + +   
Sbjct: 178 RPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPG 237

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           LF  M++ G  PNVV +   +D LCK G + +A  +L+ M+  G++P+ +T+ +L+DG C
Sbjct: 238 LFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297

Query: 216 LTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
             G    A  LF+ + +S   K  V +Y+++I GYCK  ++  A  L   M+ +G+ P+ 
Sbjct: 298 KIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 357

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             + TL  G       +RAF+L ++M+  G   + +TY   I G CK G I +A ++   
Sbjct: 358 NTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRM 417

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                   D   Y  LI   CK G +  AL+LF  +      P++ TY+ +I   C   Q
Sbjct: 418 ATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQ 477

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           M++++ LF       +VP   T+  +I G+ R+ + +  +++  +M +   +PD      
Sbjct: 478 MEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGA 537

Query: 455 VVDLLAK 461
           ++  L K
Sbjct: 538 LISGLCK 544



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 205/434 (47%), Gaps = 10/434 (2%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  PD  ++  LV G C+      A  L   M             ++ T T ++   C++
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSL------DSATCTVVVRAFCRQ 229

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G       L  +M +    PNVV YT+ + G C      +A  +  EM+ +G++PNV T 
Sbjct: 230 GRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTH 289

Query: 173 NVIMDELCKNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
             ++D LCK G  + A RL L L+     +P+  TY  ++ G+C  G++  A+ L   M 
Sbjct: 290 TSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMV 349

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G      +Y+ LI+G+C+    + A  L ++M  +G  P++  +N +  G  +  +++
Sbjct: 350 EQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQ 409

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           +A+K+       G+  D  TY   I   CK G+I  A++LF+ +    C  DI  Y ++I
Sbjct: 410 QAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTII 469

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
              C+  ++E + +LF       LVP   TY+ MI G C  G+   A  +F  M ++  +
Sbjct: 470 AMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCL 529

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP-DASIVSIVVDLLAKNE--ISLNS 468
           P+ IT+  LI G  + +   +   L   M + +++P D + V++  +   +++  I+++ 
Sbjct: 530 PDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSF 589

Query: 469 LPSFTVHEQQEEVD 482
           L      +Q    D
Sbjct: 590 LDGLDKRQQAHAAD 603



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 10/146 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+ +    V  R+++    PD +T+ +LI GLC ESR+ EA ALF  +      P   T
Sbjct: 510 VGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVT 569

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             TL    CR   T +A++  +         G+           ++  L     +D A  
Sbjct: 570 CVTLAYEYCRRDKTTIAVSFLD---------GLDKRQQAHAADALVRKLSAVDNLDAASL 620

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCY 146
            L  + DK+   +  TYTS I   CY
Sbjct: 621 FLKNVLDKHYAVDHATYTSFINS-CY 645


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 230/490 (46%), Gaps = 29/490 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +  ++ ++   P+ VTF ++I GL    R  EA     K+   G EP + TY
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV--------------------- 100
           + LV GL R      A  + +EM        V+   N +                     
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393

Query: 101 --------TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                   TY T+I G CK G  D A+ LL +M       N  ++TSVI   C    ++ 
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A R   EM+ + + P       ++  LCK+GK  +A  L    +  G   D  T N LL 
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C  G+++ A  +   +   GC     SY+ LI+G C  K+++ A     EM+ +G+KP
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D   ++ L  GLF +++VE A + +D+ +RNG+  D +TY   IDG CK     E  E F
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +     + +   YN LI   C+SGRL +ALEL   +    + PN  TY+ +I G+   
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
            ++++A+ LF +M    + PNV  +  LI G+ ++ +  KV  LL +M   NV P+    
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753

Query: 453 SIVVDLLAKN 462
           ++++   A++
Sbjct: 754 TVMIGGYARD 763



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 218/453 (48%), Gaps = 29/453 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   + VL  + K  F P+ + + +LI        + +A  +   +   G      TY 
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404

Query: 63  TLVNGLCRTSHTIVALNLFEEMAN-----GNGEF-GVVC--------------------- 95
           TL+ G C+      A  L +EM +       G F  V+C                     
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464

Query: 96  --EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
              P     TT+I GLCK G   KA EL  Q  +K    +  T  +++ G C A   +EA
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            R+  E++ +G   + V++N ++   C   K+DEA   LD M++ G++PD +TY+ L+ G
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
                +V  A + +   +  G    V++YS++I+G CK +  E     + EM+SK ++P+
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V++N L        ++  A +L ++M+  G++ ++ TY + I G+     + EA  LF 
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R+   E ++  Y +LIDG  K G++     L R +    + PN +TY++MIGG   DG
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            + +A  L  +M E  +VP+ IT+   I G+++
Sbjct: 765 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 215/439 (48%), Gaps = 41/439 (9%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  PDV+ +TT +N  C+      A+ LF +M     E GV   PN VT+ T+IDGL   
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME----EAGVA--PNVVTFNTVIDGLGMC 308

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G  D+A     +M ++ ++P ++TY+ +++G   AK   +A  +  EM  +G  PNV+ +
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++D   + G +++A  + DLM+  G+   + TYNTL+ G+C  G+ ++A+ L   M S
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428

Query: 233 MG---------------CKHTVFSYSI--------------------LINGYCKNKEIEG 257
           +G               C H +F  ++                    LI+G CK+ +   
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           AL L+ + L+KG   D    N L  GL E  +++ AF++  E+   G   D  +Y T I 
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C    + EA      +     + D   Y+ LI GL    ++E A++ +       ++P
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +V TYS+MI G C   + ++ ++ F +M    V PN + ++ LIR + R    S  +EL 
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668

Query: 438 HKMKEINVMPDASIVSIVV 456
             MK   + P+++  + ++
Sbjct: 669 EDMKHKGISPNSATYTSLI 687



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 206/413 (49%), Gaps = 15/413 (3%)

Query: 74  TIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
           ++V  N F++       F VVC+   P+   +TT I+  CK G V++A +L  +M++  +
Sbjct: 235 SLVRANEFQKCCEA---FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV 291

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PNVVT+ +VI G      ++EA     +M+++G++P ++T+++++  L +  ++ +A  
Sbjct: 292 APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF 351

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +L  M + G  P+   YN L+D F   G +N A E+   M S G   T  +Y+ LI GYC
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           KN + + A  L  EMLS G   +     ++   L      + A +   EM    ++    
Sbjct: 412 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
              T I GLCK+G   +A+EL+          D R  N+L+ GLC++G+L+ A  + + +
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                V + V+Y+ +I G C   ++D+A     +M +  + P+  T+ +LI G   +N+ 
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDE 483
            + I+     K   ++PD    S+++D   K E            E QE  DE
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE---------RTEEGQEFFDE 635



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 161/327 (49%), Gaps = 6/327 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S    +  + L   F  D  T  +L+ GLC   ++ EA  +  ++   GC  D  +Y
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C       A    +EM           +P+  TY+ +I GL     V++A + 
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQF 597

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
               K   + P+V TY+ +I G C A+   E +  F EMM + VQPN V +N ++   C+
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++  A  L + M   G+ P++ TY +L+ G  +  RV  AK LF  M   G +  VF 
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GY K  ++     L  EM SK + P+ + +  +  G      V  A +L +EM+
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEA 328
             G+  D+ TY+ FI G  K G ++EA
Sbjct: 778 EKGIVPDSITYKEFIYGYLKQGGVLEA 804



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 146/298 (48%), Gaps = 6/298 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F +   IL      D V++ +LI G C + ++ EA     ++   G +PD +TY
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+ GL   +    A+  +++    NG       P+  TY+ +IDG CK    ++ +E 
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKR-NGML-----PDVYTYSVMIDGCCKAERTEEGQEF 632

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  KN++PN V Y  +IR +C +   + A  L  +M  +G+ PN  T+  ++  +  
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA  L + M   G+ P+ F Y  L+DG+   G++   + L   M S        +
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           Y+++I GY ++  +  A  L +EM  KGI PD + +     G  +   V  AFK  DE
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 8/221 (3%)

Query: 244 ILINGYCKNKEIEG---ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +LI  YC   + +G   AL ++  + +KG+ P     N L   L   ++ ++  + FD +
Sbjct: 193 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 252

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + GV+ D + + T I+  CK G + EAV+LF  +       ++  +N++IDGL   GR 
Sbjct: 253 CK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A      +    + P ++TYSI++ GL    ++  A  +  +M +    PNVI ++ L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I  FI     +K IE+    K++ V    S+ S   + L K
Sbjct: 372 IDSFIEAGSLNKAIEI----KDLMVSKGLSLTSSTYNTLIK 408


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/407 (31%), Positives = 210/407 (51%), Gaps = 10/407 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
            TF  +++ LC+  +   A  L  ++      P+  TY T++ G C       AL++  E
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 210

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIR 142
           M    G       PN  TY T+I G CK G VD+A ++  +M  K  +KP  V Y ++I 
Sbjct: 211 MRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 265

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+C     + A      M+++GV   V T+N+++  L  +G+  EA  L++ M   G+  
Sbjct: 266 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAL 325

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D FTYN L++G C  G V  A E+F +M   G + TV +Y+ LI    K  +++    L+
Sbjct: 326 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 385

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            E + +GI+PD+V++N L         ++RAF++  EM++  +A D  TY T + GLC  
Sbjct: 386 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 445

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G + EA +L   +     + D+  YN+LI G    G ++ AL +   +      P ++TY
Sbjct: 446 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 505

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           + +I GLC +GQ D A ++  +M EN + P+  T+  LI G    +E
Sbjct: 506 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 216/432 (50%), Gaps = 19/432 (4%)

Query: 42  AAALFT---KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           A ALF    +LR+  C     T+  ++  LC       AL L  +M            PN
Sbjct: 138 AFALFADMFRLRLPLC---TTTFNIMLRHLCSAGKPARALELLRQMP----------RPN 184

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            VTY T+I G C  G V  A +++ +M+++  I PN  TY +VI G+C     +EA ++F
Sbjct: 185 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 244

Query: 158 IEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            EM+ +G V+P  V +N ++   C  GK+D A    D M++ GV     TYN L+    +
Sbjct: 245 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 304

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR   A EL   M   G    VF+Y+ILING+CK   ++ AL ++  M  +G++  VV 
Sbjct: 305 DGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 364

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + +L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   + 
Sbjct: 365 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 424

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +   D   YN+L+ GLC  GR++ A +L   +    + P++VTY+ +I G    G + 
Sbjct: 425 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI-VSIV 455
            A  +  +M      P ++T++ LI+G  +  +      ++ +M E  + PD S  +S++
Sbjct: 485 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544

Query: 456 VDLLAKNEISLN 467
             L  ++E +++
Sbjct: 545 EGLTTEDERAID 556



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 191/382 (50%), Gaps = 6/382 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPDVFTYTTLVNGLCRTS 72
           +L+    P+AVT+ ++I G C+  R+  A  +  ++R   G  P+ +TY T+++G C+  
Sbjct: 176 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 235

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ +F+EM    GE     +P  V Y  +I G C +G +D A     +M ++ +  
Sbjct: 236 RVDEAVKVFDEMLT-KGE----VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM 290

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            V TY  ++          EA  L  EM  +G+  +V T+N++++  CK G + +A  + 
Sbjct: 291 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIF 350

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M + GVR    TY +L+      G+V    +LF      G +  +  Y+ LIN +  +
Sbjct: 351 ENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 410

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             I+ A  +  EM  K I PD V +NTL  GL  + +V+ A KL DEM + G+  D  TY
Sbjct: 411 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 470

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I G    G + +A+ + + +        +  YN+LI GLCK+G+ + A  + + +  
Sbjct: 471 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 530

Query: 373 GVLVPNVVTYSIMIGGLCNDGQ 394
             + P+  TY  +I GL  + +
Sbjct: 531 NGITPDDSTYISLIEGLTTEDE 552



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 167/320 (52%), Gaps = 7/320 (2%)

Query: 1   MGRVSHGFVVLGRIL-KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +GRV     V   +L K    P+AV + +LI G C + ++  A     ++   G    V 
Sbjct: 234 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 293

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY  LV+ L        A  L EEM    G  G+  +    TY  +I+G CKEG V KA 
Sbjct: 294 TYNLLVHALFMDGRGTEAYELVEEM----GGKGLALD--VFTYNILINGHCKEGNVKKAL 347

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+   M  + ++  VVTYTS+I          E  +LF E + +G++P++V +N +++  
Sbjct: 348 EIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 407

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
             +G +D A  ++  M +  + PD  TYNTL+ G CL GRV+ A++L   M   G +  +
Sbjct: 408 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDL 467

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+GY    +++ AL + +EM++KG  P ++ +N L  GL +  Q + A  +  E
Sbjct: 468 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 527

Query: 300 MQRNGVAADTWTYRTFIDGL 319
           M  NG+  D  TY + I+GL
Sbjct: 528 MVENGITPDDSTYISLIEGL 547



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 22/214 (10%)

Query: 257 GALSLYSEMLS--KGIKPDVVIH----------NTLFVGLFEIHQVERAFKLFDEMQRNG 304
            AL+L+   LS  K + P  V+           N L      +     + +L+  M+   
Sbjct: 59  AALALFKSALSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLS 118

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +   T +    +  L        A  LF  +  L+       +N ++  LC +G+   AL
Sbjct: 119 LPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 174

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AVVPNVITFDMLIRG 423
           EL R +P     PN VTY+ +I G C+ G++  A D+  +M E   + PN  T+  +I G
Sbjct: 175 ELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISG 230

Query: 424 FIRINEPSKVIELLHKM-KEINVMPDASIVSIVV 456
           + ++    + +++  +M  +  V P+A + + ++
Sbjct: 231 WCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 264



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 41/146 (28%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++G + K    PD VT+ +L++GLC   R+ EA  L  ++   G +PD+ TY
Sbjct: 411 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 470

Query: 62  TTLV-----------------------------------NGLCRTSHTIVALNLFEEMAN 86
            TL+                                    GLC+      A N+ +EM  
Sbjct: 471 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV- 529

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKE 112
              E G+   P+  TY ++I+GL  E
Sbjct: 530 ---ENGIT--PDDSTYISLIEGLTTE 550


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 222/447 (49%), Gaps = 19/447 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR++    VLG   ++    + VT+T+LI G C   R+ +A  L   + V    PD +TY
Sbjct: 138 GRLADAERVLG-AARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPV---APDTYTY 193

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ GLC      +A    E            C PN VT+ T I   C+ G +D+A +L
Sbjct: 194 NTVLKGLC------IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 247

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM      P+VV Y+++I GF      ++A  L   M+    +PN V +N  +  LC 
Sbjct: 248 LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCI 304

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             + ++   L+  M++ G  P+  T++ L+   C    V+ A E+   ME  GC+    +
Sbjct: 305 AERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVN 364

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+IN   +   ++ AL L + M+    KPD +  N +  G     +   A +L  +M 
Sbjct: 365 YNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMF 421

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R+       T+   ID LC+NG +  A ++F  +   +C  DI  Y+SL++G  + G +E
Sbjct: 422 RDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVE 481

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A++LFRS+PC    P++ +Y+ ++ GLC   + + A +L  +M      PN +TF++LI
Sbjct: 482 VAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILI 538

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
               +     + IE+L +M      PD
Sbjct: 539 NSLCQKGLVDRAIEVLEQMPNYGSTPD 565



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 223/430 (51%), Gaps = 18/430 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD  T+ +++KGLC   +  EA  L  ++    C P+  T+ T +   C+      A+ 
Sbjct: 187 APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 246

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L ++M      +G  C P+ V Y+T+I+G  ++G VD+A +LL  M     KPN V Y +
Sbjct: 247 LLDQMP----RYG--CTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 297

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            ++G C A+ W +   L  EM+ +G  PN  TF++++  LC+N  +D A  +L+ M ++G
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   YN +++     GRV+ A  L   + SM CK     ++ ++ G+C+ +    A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDALGFNAVLKGFCRAERWHDAS 414

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L ++M         +  N L   L +   V  A ++F++M R     D  TY + ++G 
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G +  A++LF   R + C+ DI +YN+++ GLC++ R E A EL   +      PN 
Sbjct: 475 SEQGLVEVAIQLF---RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++I+I  LC  G +D+A ++   M      P++ T++ LI GF   +E  ++ + L  
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF---SEQGRLDDALKL 588

Query: 440 MKEINVMPDA 449
           +  ++  PDA
Sbjct: 589 LSTMSCKPDA 598



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 202/432 (46%), Gaps = 53/432 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTF + I+  C    +  A  L  ++  +GC PDV  Y+TL+NG     H   AL+L
Sbjct: 223 PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 282

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M         +C+PNTV Y   + GLC     +   EL+ +M  K   PN  T++ +
Sbjct: 283 LNTM---------LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSML 333

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C     + A  +  +M   G +P+ V +N+I++ L + G++D+A RLL+ M+    
Sbjct: 334 ISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---C 390

Query: 201 RPDAFTYNTLLDGFCLTGR-----------------------------------VNHAKE 225
           +PDA  +N +L GFC   R                                   VN+A +
Sbjct: 391 KPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQ 450

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F  M    C   + +YS L+NG+ +   +E A+ L+  M     KPD+  +N +  GL 
Sbjct: 451 VFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLC 507

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              + E A +L  EM       +  T+   I+ LC+ G +  A+E+   +       DI 
Sbjct: 508 RAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIF 567

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YN+LI+G  + GRL+ AL+L  ++ C    P+ ++Y+  + GLC   +   A +L  +M
Sbjct: 568 TYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEM 624

Query: 406 EENAVVPNVITF 417
             N   PN +TF
Sbjct: 625 LRNKCTPNEVTF 636



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 204/381 (53%), Gaps = 18/381 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L  +L     P+ V + + +KGLC   R  +   L  ++   GC P+  T+
Sbjct: 274 GHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATF 330

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++ LC+ +    A+ + E+M     ++G  CEP+TV Y  II+ L + G VD A  L
Sbjct: 331 SMLISSLCQNNLVDSAVEVLEQME----KYG--CEPDTVNYNIIINSLSERGRVDDALRL 384

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M     KP+ + + +V++GFC A+ W++A  L  +M         +TFN+++D LC+
Sbjct: 385 LNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQ 441

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG ++ A+++ + M ++   PD  TY++LL+GF   G V  A +LF    SM CK  +FS
Sbjct: 442 NGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RSMPCKPDIFS 498

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++ G C+    E A  L +EM+ K   P+ V  N L   L +   V+RA ++ ++M 
Sbjct: 499 YNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMP 558

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D +TY   I+G  + G + +A++L  T+    C+ D  +YNS + GLC++ R +
Sbjct: 559 NYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQ 615

Query: 362 IALELFRSLPCGVLVPNVVTY 382
            A EL   +      PN VT+
Sbjct: 616 DAEELVAEMLRNKCTPNEVTF 636



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 154/292 (52%), Gaps = 8/292 (2%)

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           ++ N+++ +LC   ++ +A R+LD +       DA ++NTL+ G+C  GR+  A+ +  +
Sbjct: 91  ISCNILIKKLCATRRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
             + G  + V +Y+ LI+GYC++  ++ AL L + M    + PD   +NT+  GL    +
Sbjct: 150 ARATGAANVV-TYTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLCIAKK 205

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            E A +L  EM RN    +  T+ T I   C+NG +  AV+L   +    C  D+  Y++
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI+G  + G ++ AL+L  ++ C    PN V Y+  + GLC   + +   +L  +M    
Sbjct: 266 LINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             PN  TF MLI    + N     +E+L +M++    PD    +I+++ L++
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSE 374


>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
 gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
          Length = 319

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 111/299 (37%), Positives = 183/299 (61%), Gaps = 5/299 (1%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + P+ VTFN+++D LCK GK+ EA  ++  MI+ GV P+  TY++L++G+ L  RV  A+
Sbjct: 6   IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           ++F +M + GC   V SY+ILING CK + I+ A  ++ EM  +G+ P+   +NTL  G 
Sbjct: 66  KVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF 125

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
           ++     +  +LF +M   G + D  TY  F+ GL K GY+ +A+ELF  ++      D+
Sbjct: 126 WK-----QKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDL 180

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN LID +CKSG+LE A ELF  L    L+P+V +++ +I GLC +G +D+A   F  
Sbjct: 181 VIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQ 240

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           ME +   P+  ++++++RGF++ N  S+  +L  +M +     DA   ++  DLL+K++
Sbjct: 241 MERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKDD 299



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 156/302 (51%), Gaps = 11/302 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDAVTF  L+  LC + +I EA  +   +   G EP+  TY++L+NG    +    A  +
Sbjct: 8   PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  M          C P+ ++Y  +I+G CK   +D+AK++  +M  + + PN  TY ++
Sbjct: 68  FNAMITRG------CIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTL 121

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GF     W +  +LF +M  QG  P++VT+++ +  L K G +D+A  L   M  + +
Sbjct: 122 LGGF-----WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYL 176

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD   YN L+D  C +G++  A+ELF+ +   G    V S++ +I+G C+   ++ A  
Sbjct: 177 NPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYK 236

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            + +M   G  PD   +N +  G  + +   RA +LF EM   G +AD  T     D L 
Sbjct: 237 AFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLS 296

Query: 321 KN 322
           K+
Sbjct: 297 KD 298



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 155/287 (54%), Gaps = 5/287 (1%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I P+ VT+  ++   C     +EA+ +   M+++GV+PN VT++ +M+      ++ EA 
Sbjct: 6   IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           ++ + MI  G  PD  +YN L++G C   R++ AK++F  M   G      +Y+ L+ G+
Sbjct: 66  KVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF 125

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K K     + L+ +M ++G  PD+V ++    GL +   +++A +LF EMQ N +  D 
Sbjct: 126 WKQK-----IQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDL 180

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   ID +CK+G + +A ELF  L +     D+R++ S+I GLC+ G L+ A + FR 
Sbjct: 181 VIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQ 240

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +      P+  +Y++++ G   +    +A  LF +M +     + +T
Sbjct: 241 MERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALT 287



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 146/274 (53%), Gaps = 11/274 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    ++  +++    P+ VT++SL+ G   ++R+ EA  +F  +   GC PDV +Y
Sbjct: 24  GKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMITRGCIPDVLSY 83

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NG C+      A  +F+EM+      G++  PNT TY T++ G  K+       +L
Sbjct: 84  NILINGCCKAQRIDEAKQIFDEMSFR----GLI--PNTATYNTLLGGFWKQKI-----QL 132

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  +   P++VTY+  + G       ++A  LF EM +  + P++V +N+++D +CK
Sbjct: 133 FKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCK 192

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +GK+++A  L   +   G+ PD  ++ +++ G C  G ++ A + F  ME  GC     S
Sbjct: 193 SGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCS 252

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           Y++++ G+ +N     A  L+ EM  +G   D +
Sbjct: 253 YNVIVRGFLQNNGASRAEQLFQEMFDRGFSADAL 286



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 120/237 (50%), Gaps = 5/237 (2%)

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++IL++  CK  +I  A  +   M+ KG++P+ V +++L  G    ++V  A K+F+ M
Sbjct: 12  TFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAM 71

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   D  +Y   I+G CK   I EA ++F  +       +   YN+L+ G  K    
Sbjct: 72  ITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQ--- 128

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
              ++LF+ +      P++VTYSI + GL   G +D+A +LF +M+ N + P+++ +++L
Sbjct: 129 --KIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNIL 186

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           I    +  +     EL  K+    ++PD    + ++  L +  +   +  +F   E+
Sbjct: 187 IDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMER 243



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 5/198 (2%)

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M S  I PD V  N L   L +  ++  A  +   M   GV  +T TY + ++G      
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + EA ++F+ +    C  D+ +YN LI+G CK+ R++ A ++F  +    L+PN  TY+ 
Sbjct: 61  VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           ++GG        +   LF DM      P+++T+ + + G  +     + +EL  +M+   
Sbjct: 121 LLGGF-----WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNY 175

Query: 445 VMPDASIVSIVVDLLAKN 462
           + PD  I +I++D + K+
Sbjct: 176 LNPDLVIYNILIDAMCKS 193



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 60/231 (25%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALF------------------------TKL 49
           I + C  PD +++  LI G C   RI EA  +F                         K+
Sbjct: 72  ITRGCI-PDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQKI 130

Query: 50  RVF------GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG---------NGEFGVV 94
           ++F      GC PD+ TY+  ++GL +  +   AL LF EM N          N     +
Sbjct: 131 QLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAM 190

Query: 95  CE--------------------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
           C+                    P+  ++T+II GLC+EG +D+A +   QM+     P+ 
Sbjct: 191 CKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDC 250

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
            +Y  ++RGF      + A++LF EM D+G   + +T  +  D L K+  +
Sbjct: 251 CSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKDDNL 301



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 65/124 (52%)

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D   +N L+D LCK G++  A  + +++    + PN VTYS ++ G     ++ +AR +F
Sbjct: 9   DAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVF 68

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             M     +P+V+++++LI G  +     +  ++  +M    ++P+ +  + ++    K 
Sbjct: 69  NAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQ 128

Query: 463 EISL 466
           +I L
Sbjct: 129 KIQL 132


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 243/519 (46%), Gaps = 81/519 (15%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    F ++  +++  F PDA T+T +I  LC   R+ +A  LF +++  G  PDV+T
Sbjct: 430 VGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYT 489

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV-------------------------- 94
           YT L++  C+      A + F+EM +      VV                          
Sbjct: 490 YTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMV 549

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQM---------------KDKN-IKPNVV 135
              C PN +TY+ +IDGLCK G + KA E+  ++               KD + I PNVV
Sbjct: 550 GDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVV 609

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY +++ G C A+  ++A  L   M+  G +PN + ++ ++D  CK G++D A  +   M
Sbjct: 610 TYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRM 669

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            + G  P   TY +L+D     GR++ A ++   M    C   V +Y+ +++G CK  E 
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGET 729

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E AL+L S M  KG  P+VV +  L  GL +  +V+   +LF +M+  G A +  TYR  
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS-------------------------- 349
           I+  C  G + +A  L   ++       ++ Y +                          
Sbjct: 790 INHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAP 849

Query: 350 -------LIDGLCKSGRLEIALELFRSL---PCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
                  LID   K+GRLE ALEL + +      + + +   ++ +I  LC   Q+++A 
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAV 909

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            L+ +M    +VP++  F  L++G I  N+ ++ ++L +
Sbjct: 910 ALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCY 948



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 213/461 (46%), Gaps = 32/461 (6%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI----- 75
           P    F SL+   C       A  LF ++   GC P    Y   +  +C           
Sbjct: 339 PSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELL 398

Query: 76  -VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNV 134
            +A  ++EEM   +      C  N +        LC  G  +KA +++ +M  K   P+ 
Sbjct: 399 DLAEKVYEEMLVAS------CVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDA 452

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
            TYT VI   C AK  ++A  LF EM   GV P+V T+ +++D  CK G +++A    D 
Sbjct: 453 STYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDE 512

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   G  P+  TY  LL  +  + ++  A ++F  M    C     +YS LI+G CK  E
Sbjct: 513 MRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGE 572

Query: 255 IEGALSLYSEMLSKG----------------IKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           I+ A  +Y++++                   I P+VV +  L  GL +  +V  A  L D
Sbjct: 573 IQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLD 632

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCK 356
            M   G   +   Y   +DG CK G I  A E+F  LR+ KC +   +  Y SLID + K
Sbjct: 633 AMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVF--LRMTKCGYLPSVHTYTSLIDRMFK 690

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            GRL++A+++   +      PNVVTY+ M+ GLC  G+ +KA +L   ME+    PNV+T
Sbjct: 691 DGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVT 750

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +  LI G  +  +    +EL  +MK     P+     I+++
Sbjct: 751 YTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILIN 791



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 227/474 (47%), Gaps = 30/474 (6%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L R+  + + P+ VT+ +L+ G   + ++     +   +   GC P    + +LV+  C 
Sbjct: 294 LHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCN 353

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC------KEGFVDKAKELLLQ 124
                 A  LF  M N  G     C P  V Y   I  +C          +D A+++  +
Sbjct: 354 AEDYAYAYKLFNRM-NTCG-----CPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEE 407

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M   +   N +   +  R  C    + +A ++  EMM +G  P+  T+  ++  LC+  +
Sbjct: 408 MLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKR 467

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A  L   M + GV PD +TY  L+D FC  G +  A+  F  M S GC   V +Y+ 
Sbjct: 468 VDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTA 527

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM---- 300
           L++ Y K+K++  A  ++  M+     P+ + ++ L  GL +  ++++A +++ ++    
Sbjct: 528 LLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTS 587

Query: 301 ------------QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
                         + ++ +  TY   ++GLCK   + +A +L   +    CE +   Y+
Sbjct: 588 DNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYD 647

Query: 349 SLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           +L+DG CK G ++ A E+F R   CG L P+V TY+ +I  +  DG++D A  +   M +
Sbjct: 648 ALVDGFCKVGEIDSAQEVFLRMTKCGYL-PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 706

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++  PNV+T+  ++ G  +  E  K + LL  M++    P+    + ++D L K
Sbjct: 707 DSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGK 760



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 243/551 (44%), Gaps = 83/551 (15%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LGR+    + P AVT+ +L++ L +  ++  A  +  ++   G   D  T  +    LC+
Sbjct: 192 LGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCK 251

Query: 71  TSHTIVALNLFE------------EMANGNGEFGVVCE--------------PNTVTYTT 104
                 AL+L E            +M +G  E  +  E              PN VTY T
Sbjct: 252 EGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRT 311

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           ++ G  K+  +   K ++  M  +   P+   + S++  +C A+D+  A +LF  M   G
Sbjct: 312 LLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCG 371

Query: 165 VQPNVVTFNVIMDELCKN-----------------------------------------G 183
             P  V +N+ +  +C                                           G
Sbjct: 372 CPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVG 431

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K ++A +++  M++ G  PDA TY  ++   C   RV+ A  LF  M+ +G    V++Y+
Sbjct: 432 KFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYT 491

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           ILI+ +CK   IE A S + EM S G  P+VV +  L     +  Q+ +A  +F  M  +
Sbjct: 492 ILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGD 551

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTL----RILKCEF------------DIRAY 347
               +  TY   IDGLCK G I +A E++  L      ++ +F            ++  Y
Sbjct: 552 ACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTY 611

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +L++GLCK+ ++  A +L  ++      PN + Y  ++ G C  G++D A+++FL M +
Sbjct: 612 GALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTK 671

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
              +P+V T+  LI    +       +++L +M + +  P+    + +VD L K   +  
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEK 731

Query: 468 SLPSFTVHEQQ 478
           +L   ++ E++
Sbjct: 732 ALNLLSLMEKK 742



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 211/509 (41%), Gaps = 77/509 (15%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VLGR+L             L++  C +    EA     +L+ FG  P   TY  LV  L 
Sbjct: 167 VLGRLL-----------NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLA 215

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                 +A  + +EM+      G   + +TV   +    LCKEG    A +LL   + ++
Sbjct: 216 SAGQVEMAFRVQKEMSAS----GFCMDRSTVG--SFAQALCKEGRWGDALDLL---ERED 266

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
            K + V  T +I G   A  +NEA      M      PNVVT+  ++    K  ++    
Sbjct: 267 FKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCK 326

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           R++++M+  G  P    +N+L+  +C      +A +LF  M + GC      Y+I I   
Sbjct: 327 RIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSI 386

Query: 250 CKNKEI-----------------------------------------EGALSLYSEMLSK 268
           C  +E+                                         E A  +  EM+ K
Sbjct: 387 CGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRK 446

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  PD   +  +   L +  +V++AF LF EM++ GV  D +TY   ID  CK G I +A
Sbjct: 447 GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQA 506

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
              F  +R   C  ++  Y +L+    KS +L  A ++F  +      PN +TYS +I G
Sbjct: 507 QSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDG 566

Query: 389 LCNDGQMDKARDLFLDM----------------EENAVVPNVITFDMLIRGFIRINEPSK 432
           LC  G++ KA +++  +                + + + PNV+T+  L+ G  +  + S 
Sbjct: 567 LCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSD 626

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAK 461
             +LL  M      P+  +   +VD   K
Sbjct: 627 AHDLLDAMLAAGCEPNQIVYDALVDGFCK 655



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 161/352 (45%), Gaps = 45/352 (12%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +VS    +L  +L +   P+ + + +L+ G C    I  A  +F ++   G  P V TYT
Sbjct: 623 KVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYT 682

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++ + +     +A+ +  +M   +      C PN VTYT ++DGLCK G  +KA  LL
Sbjct: 683 SLIDRMFKDGRLDLAMKVLSQMLKDS------CNPNVVTYTAMVDGLCKTGETEKALNLL 736

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M+ K   PNVVTYT++I G   A   +    LF++M  +G  PN VT+ ++++  C  
Sbjct: 737 SLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAA 796

Query: 183 G------------------KMDEASR---------------LLDLMIQHGVRPDAFTYNT 209
           G                  K  +  R               LL+ M  H   P A  Y  
Sbjct: 797 GLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGM 856

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFS---YSILINGYCKNKEIEGALSLYSEML 266
           L+D F   GR+  A EL   M  +     + S   ++ LI   C + ++E A++LYSEM 
Sbjct: 857 LIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMR 916

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            +GI PD+     L  GL E ++   A +L   + + GV    W    F DG
Sbjct: 917 RRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV---NWEGNKFCDG 965


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 230/490 (46%), Gaps = 29/490 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +  ++ ++   P+ VTF ++I GL    R  EA     K+   G EP + TY
Sbjct: 263 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 322

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV--------------------- 100
           + LV GL R      A  + +EM        V+   N +                     
Sbjct: 323 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 382

Query: 101 --------TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                   TY T+I G CK G  D A+ LL +M       N  ++TSVI   C    ++ 
Sbjct: 383 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 442

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A R   EM+ + + P       ++  LCK+GK  +A  L    +  G   D  T N LL 
Sbjct: 443 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 502

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C  G+++ A  +   +   GC     SY+ LI+G C  K+++ A     EM+ +G+KP
Sbjct: 503 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 562

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D   ++ L  GLF +++VE A + +D+ +RNG+  D +TY   IDG CK     E  E F
Sbjct: 563 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 622

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +     + +   YN LI   C+SGRL +ALEL   +    + PN  TY+ +I G+   
Sbjct: 623 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 682

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
            ++++A+ LF +M    + PNV  +  LI G+ ++ +  KV  LL +M   NV P+    
Sbjct: 683 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 742

Query: 453 SIVVDLLAKN 462
           ++++   A++
Sbjct: 743 TVMIGGYARD 752



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 218/453 (48%), Gaps = 29/453 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   + VL  + K  F P+ + + +LI        + +A  +   +   G      TY 
Sbjct: 334 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 393

Query: 63  TLVNGLCRTSHTIVALNLFEEMAN-----GNGEF-GVVC--------------------- 95
           TL+ G C+      A  L +EM +       G F  V+C                     
Sbjct: 394 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 453

Query: 96  --EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
              P     TT+I GLCK G   KA EL  Q  +K    +  T  +++ G C A   +EA
Sbjct: 454 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 513

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            R+  E++ +G   + V++N ++   C   K+DEA   LD M++ G++PD +TY+ L+ G
Sbjct: 514 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 573

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
                +V  A + +   +  G    V++YS++I+G CK +  E     + EM+SK ++P+
Sbjct: 574 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 633

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V++N L        ++  A +L ++M+  G++ ++ TY + I G+     + EA  LF 
Sbjct: 634 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 693

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R+   E ++  Y +LIDG  K G++     L R +    + PN +TY++MIGG   DG
Sbjct: 694 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 753

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            + +A  L  +M E  +VP+ IT+   I G+++
Sbjct: 754 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 786



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 215/439 (48%), Gaps = 41/439 (9%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  PDV+ +TT +N  C+      A+ LF +M     E GV   PN VT+ T+IDGL   
Sbjct: 244 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME----EAGVA--PNVVTFNTVIDGLGMC 297

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G  D+A     +M ++ ++P ++TY+ +++G   AK   +A  +  EM  +G  PNV+ +
Sbjct: 298 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 357

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++D   + G +++A  + DLM+  G+   + TYNTL+ G+C  G+ ++A+ L   M S
Sbjct: 358 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 417

Query: 233 MG---------------CKHTVFSYSI--------------------LINGYCKNKEIEG 257
           +G               C H +F  ++                    LI+G CK+ +   
Sbjct: 418 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 477

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           AL L+ + L+KG   D    N L  GL E  +++ AF++  E+   G   D  +Y T I 
Sbjct: 478 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 537

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C    + EA      +     + D   Y+ LI GL    ++E A++ +       ++P
Sbjct: 538 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 597

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +V TYS+MI G C   + ++ ++ F +M    V PN + ++ LIR + R    S  +EL 
Sbjct: 598 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 657

Query: 438 HKMKEINVMPDASIVSIVV 456
             MK   + P+++  + ++
Sbjct: 658 EDMKHKGISPNSATYTSLI 676



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 206/413 (49%), Gaps = 15/413 (3%)

Query: 74  TIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
           ++V  N F++       F VVC+   P+   +TT I+  CK G V++A +L  +M++  +
Sbjct: 224 SLVRANEFQKCCEA---FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV 280

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PNVVT+ +VI G      ++EA     +M+++G++P ++T+++++  L +  ++ +A  
Sbjct: 281 APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF 340

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +L  M + G  P+   YN L+D F   G +N A E+   M S G   T  +Y+ LI GYC
Sbjct: 341 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 400

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           KN + + A  L  EMLS G   +     ++   L      + A +   EM    ++    
Sbjct: 401 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 460

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
              T I GLCK+G   +A+EL+          D R  N+L+ GLC++G+L+ A  + + +
Sbjct: 461 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 520

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                V + V+Y+ +I G C   ++D+A     +M +  + P+  T+ +LI G   +N+ 
Sbjct: 521 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 580

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDE 483
            + I+     K   ++PD    S+++D   K E            E QE  DE
Sbjct: 581 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE---------RTEEGQEFFDE 624



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 161/327 (49%), Gaps = 6/327 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S    +  + L   F  D  T  +L+ GLC   ++ EA  +  ++   GC  D  +Y
Sbjct: 473 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 532

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C       A    +EM           +P+  TY+ +I GL     V++A + 
Sbjct: 533 NTLISGCCGKKKLDEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQF 586

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
               K   + P+V TY+ +I G C A+   E +  F EMM + VQPN V +N ++   C+
Sbjct: 587 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 646

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++  A  L + M   G+ P++ TY +L+ G  +  RV  AK LF  M   G +  VF 
Sbjct: 647 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 706

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GY K  ++     L  EM SK + P+ + +  +  G      V  A +L +EM+
Sbjct: 707 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 766

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEA 328
             G+  D+ TY+ FI G  K G ++EA
Sbjct: 767 EKGIVPDSITYKEFIYGYLKQGGVLEA 793



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 146/298 (48%), Gaps = 6/298 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F +   IL      D V++ +LI G C + ++ EA     ++   G +PD +TY
Sbjct: 508 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 567

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+ GL   +    A+  +++    NG       P+  TY+ +IDG CK    ++ +E 
Sbjct: 568 SILICGLFNMNKVEEAIQFWDDCKR-NGML-----PDVYTYSVMIDGCCKAERTEEGQEF 621

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  KN++PN V Y  +IR +C +   + A  L  +M  +G+ PN  T+  ++  +  
Sbjct: 622 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 681

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA  L + M   G+ P+ F Y  L+DG+   G++   + L   M S        +
Sbjct: 682 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 741

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           Y+++I GY ++  +  A  L +EM  KGI PD + +     G  +   V  AFK  DE
Sbjct: 742 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 8/221 (3%)

Query: 244 ILINGYCKNKEIEG---ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +LI  YC   + +G   AL ++  + +KG+ P     N L   L   ++ ++  + FD +
Sbjct: 182 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 241

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + GV+ D + + T I+  CK G + EAV+LF  +       ++  +N++IDGL   GR 
Sbjct: 242 CK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 300

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A      +    + P ++TYSI++ GL    ++  A  +  +M +    PNVI ++ L
Sbjct: 301 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 360

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I  FI     +K IE+    K++ V    S+ S   + L K
Sbjct: 361 IDSFIEAGSLNKAIEI----KDLMVSKGLSLTSSTYNTLIK 397


>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
 gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
          Length = 440

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 119/329 (36%), Positives = 181/329 (55%), Gaps = 5/329 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  +  + + FT L+K LCAE R   A  +   ++   GC P VF+
Sbjct: 112 GRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFS 171

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GLC  S +  AL L   MA+  G+    C P+ V+Y+TIIDGL KEG  DKA  
Sbjct: 172 YNILLKGLCHESRSQEALELLHMMADDGGD----CPPDVVSYSTIIDGLFKEGDSDKAYS 227

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M ++ I P+VVTY +++   C A+  ++A  +   M+  GV P+ +T+N I+   C
Sbjct: 228 TYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYC 287

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G+  EA  +L+ M   GV PDA TY +L+D  C  GR   A+++  SM   G K  V 
Sbjct: 288 SSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVI 347

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS L++GY     +     L   M+  GI+PD  + + L     +   V+ A  +F +M
Sbjct: 348 TYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKM 407

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           ++  +  D  TY T IDGLCK+G + +A+
Sbjct: 408 RQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 162/344 (47%), Gaps = 3/344 (0%)

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +  D  + P + TY  +I   C A   +        ++ +G +   + F  ++  LC 
Sbjct: 86  MARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCA 145

Query: 182 NGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHT 238
             +   A  + L  M + G  P  F+YN LL G C   R   A EL   M   G  C   
Sbjct: 146 EKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPD 205

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V SYS +I+G  K  + + A S Y EML +GI PDVV +NT+   L +   +++A  + +
Sbjct: 206 VVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLN 265

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M +NGV  D  TY + + G C +G   EA+ +   +     E D   Y SL+D LCK+G
Sbjct: 266 RMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNG 325

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R   A ++  S+    L PNV+TYS ++ G    G + + RDL   M  N + P+   F 
Sbjct: 326 RCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFS 385

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +LI    +       + +  KM++  + PD      ++D L K+
Sbjct: 386 ILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKS 429



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 184/385 (47%), Gaps = 16/385 (4%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVF-----GCEPDVFTYTTLVNGLCRTSHTIVA 77
           A    SL + L A +R   AAA+    R+         P + TY  L+   CR       
Sbjct: 58  ASIIRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGR---- 113

Query: 78  LNL-FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ-MKDKNIKPNVV 135
           L+L F  + N   + G   EP  + +T ++  LC E     A  ++L+ M +    P+V 
Sbjct: 114 LDLGFAGLGNVIKK-GYRVEP--IIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVF 170

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           +Y  +++G C+     EA  L   M D G    P+VV+++ I+D L K G  D+A     
Sbjct: 171 SYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYH 230

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M++ G+ PD  TYNT++   C    ++ A ++   M   G      +Y+ +++GYC + 
Sbjct: 231 EMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSG 290

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           + + A+ +  +M S G++PD V + +L   L +  +   A K+ D M + G+  +  TY 
Sbjct: 291 QSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYS 350

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T + G    G +VE  +L   +     + D   ++ LI    K   +++A+ +F  +   
Sbjct: 351 TLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQ 410

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKA 398
            L P+VVTY  +I GLC  G++D A
Sbjct: 411 RLTPDVVTYGTLIDGLCKSGRVDDA 435



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 159/321 (49%), Gaps = 3/321 (0%)

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           D  V P + T+ +++   C+ G++D     L  +I+ G R +   +  LL   C   R +
Sbjct: 91  DGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTS 150

Query: 222 HAKELFVS-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIHN 278
           +A  + +  M  +GC   VFSY+IL+ G C     + AL L   M   G    PDVV ++
Sbjct: 151 NAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYS 210

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           T+  GLF+    ++A+  + EM   G+  D  TY T +  LCK   + +A+++ + +   
Sbjct: 211 TIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKN 270

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
               D   YNS++ G C SG+ + A+ +   +    + P+ VTY+ ++  LC +G+  +A
Sbjct: 271 GVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEA 330

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           R +   M +  + PNVIT+  L+ G+       ++ +LL  M    + PD  + SI++  
Sbjct: 331 RKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICA 390

Query: 459 LAKNEISLNSLPSFTVHEQQE 479
             K++    ++  F+   QQ 
Sbjct: 391 CTKHQNVDVAMFVFSKMRQQR 411


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 226/438 (51%), Gaps = 6/438 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT ++L+ GLC + R  EA ALF ++   G  P+  TY TL++ L +       L+L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM +     GVV +   VTYT ++D L K+G  D+ K+ L      N+ PN VTYT +I
Sbjct: 333 GEMVS----RGVVMD--LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C A + +EA+++ +EM ++ + PNVVTF+ +++   K G +D+A+    +M + G+ 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TY TL+DGF      + A E++  M   G K   F    L+NG  +N +IE A++L
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +    G+  D V + TL  GLF+   +  AFK   E+    +  D   Y  FI+ LC 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G   EA      +R +  + D   YN++I   C+ G    AL+L   +    + PN++T
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ ++ GL   G ++KA+ L  +M      P+ +T   +++   +      ++++   M 
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 442 EINVMPDASIVSIVVDLL 459
              +  D ++ + ++ +L
Sbjct: 687 NAGLHADITVYNTLLQVL 704



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 240/533 (45%), Gaps = 72/533 (13%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL  + +   +P+ VTF+S+I G      + +A      ++  G  P+V TY TL++G  
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460

Query: 70  RTSHTIVALNLFEEM---------------ANGNGEFGVVCEP--------------NTV 100
           +      AL ++ +M                NG  + G + E               + V
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            YTT+IDGL K G +  A +   ++ D+N+ P+ V Y   I   C    + EAK    EM
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            + G++P+  T+N ++   C+ G+  +A +LL  M    ++P+  TYNTL+ G   TG V
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             AK L   M S G   +  ++  ++    +++ ++  L ++  M++ G+  D+ ++NTL
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L       +A  + +EM  +G+A DT T+   I G CK+ ++  A   +  +     
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 341 EFDIRAYNSLIDGLCKSGRL----EIALELFRS--------------------------- 369
             +I  +N+L+ GL   GR+     + +E+ +S                           
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 370 LPCGVL----VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           L C ++    VP V TY+ +I      G M +A++LF DM++  V P   T+D+L+ G+ 
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           RI   ++V + L  MKE    P    +S +    +K        P  T   Q+
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK--------PGMTWQAQR 925



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 224/516 (43%), Gaps = 81/516 (15%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           +H   VL  + K     D VT  +L+ GLC   ++  AAAL  +    G  P + +  TL
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAG--GITPWMSSAGTL 174

Query: 65  -VNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +  +     T  AL++ + M A G          + V Y T++ G C+ G VD A+ +L
Sbjct: 175 SLLDIAGFGDTPAALSVADRMTAQG-------LPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             MK+  + PNV TYT  I  +C  K   EA  L+  M+  GV  +VVT + ++  LC++
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-------- 234
           G+  EA  L   M + G  P+  TY TL+D     GR      L   M S G        
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 235 ---------------CKHTV------------FSYSILINGYCKNKEIEGALSLYSEMLS 267
                           K T+             +Y++LI+  CK   ++ A  +  EM  
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 268 K-----------------------------------GIKPDVVIHNTLFVGLFEIHQVER 292
           K                                   GI P+VV + TL  G F+    + 
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A +++ +M   GV  + +   + ++GL +NG I EA+ LF          D   Y +LID
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GL K+G +  A +  + L    ++P+ V Y++ I  LC  G+  +A+    +M    + P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  T++ +I    R  E +K ++LLH+MK  ++ P+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 197/449 (43%), Gaps = 24/449 (5%)

Query: 19  FTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           F P D  +  +L+   C    +  A AL    R     P    Y  L+  L   +H   A
Sbjct: 68  FRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAH---A 119

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
             +  EM      F      + VT  T++ GLC+ G VD A  L  +     I P + + 
Sbjct: 120 PAVLAEMCKRGVPF------DGVTVNTLLAGLCRNGQVDAAAALADRAG--GITPWMSSA 171

Query: 138 TSV----IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
            ++    I GF    D   A  +   M  QG+  +VV +N ++   C+ G++D A  +LD
Sbjct: 172 GTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
           +M + GV P+  TY   +  +C T  V  A +L+  M   G    V + S L+ G C++ 
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
               A +L+ EM   G  P+ V + TL   L +  + +    L  EM   GV  D  TY 
Sbjct: 289 RFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             +D L K G   E  +            +   Y  LID LCK+  ++ A ++   +   
Sbjct: 349 ALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEK 408

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + PNVVT+S +I G    G +DKA +    M+E  + PNV+T+  LI GF +       
Sbjct: 409 SISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAA 468

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +E+ H M    V  +  IV  +V+ L +N
Sbjct: 469 LEVYHDMLCEGVKVNKFIVDSLVNGLRQN 497



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 8/273 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAA-LFTKLRVFGCEPDVFT 60
           G V     +L  ++ + F+P ++T   +++  C++SR ++    +   +   G   D+  
Sbjct: 638 GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA-CSQSRRLDVILDIHEWMMNAGLHADITV 696

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+  LC    T  A  + EEM       G    P+T+T+  +I G CK   +D A  
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEM------LGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              QM  +NI PN+ T+ +++ G        EA  + IEM   G++PN +T++++     
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHG 810

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K     EA RL   M+  G  P   TYN L+  F   G +  AKELF  M+  G   T  
Sbjct: 811 KQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSC 870

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +Y IL++G+ + +          +M  KG  P 
Sbjct: 871 TYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPS 903



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 140/334 (41%), Gaps = 6/334 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  +    +L  +  S   P+ +T+ +L+ GL     + +A  L  ++   G  P   T+
Sbjct: 603 GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTH 662

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++    ++    V L++ E M N           +   Y T++  LC  G   KA  +
Sbjct: 663 RRVLQACSQSRRLDVILDIHEWMMNAG------LHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M    I P+ +T+ ++I G C +   + A   + +M+ Q + PN+ TFN ++  L  
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA  +L  M + G+ P+  TY+ L  G         A  L+  M   G    V +
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+ + K   +  A  L+ +M  +G+ P    ++ L  G   I       K   +M+
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMK 896

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             G +    T         K G   +A  L   L
Sbjct: 897 EKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 6/157 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     VL  + KS   P+ +T+  L  G   +S  +EA  L+ ++   G  P V T
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++   +      A  LF++M     + GV   P + TY  ++ G  +     + K+
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQ----KRGV--HPTSCTYDILVSGWSRIRNGTEVKK 890

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            L  MK+K   P+  T + + R F       +A+RL 
Sbjct: 891 CLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 230/490 (46%), Gaps = 29/490 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +  ++ ++   P+ VTF ++I GL    R  EA     K+   G EP + TY
Sbjct: 287 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 346

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV--------------------- 100
           + LV GL R      A  + +EM        V+   N +                     
Sbjct: 347 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 406

Query: 101 --------TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                   TY T+I G CK G  D A+ LL +M       N  ++TSVI   C    ++ 
Sbjct: 407 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 466

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A R   EM+ + + P       ++  LCK+GK  +A  L    +  G   D  T N LL 
Sbjct: 467 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 526

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C  G+++ A  +   +   GC     SY+ LI+G C  K+++ A     EM+ +G+KP
Sbjct: 527 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 586

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D   ++ L  GLF +++VE A + +D+ +RNG+  D +TY   IDG CK     E  E F
Sbjct: 587 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 646

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +     + +   YN LI   C+SGRL +ALEL   +    + PN  TY+ +I G+   
Sbjct: 647 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 706

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
            ++++A+ LF +M    + PNV  +  LI G+ ++ +  KV  LL +M   NV P+    
Sbjct: 707 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 766

Query: 453 SIVVDLLAKN 462
           ++++   A++
Sbjct: 767 TVMIGGYARD 776



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 218/453 (48%), Gaps = 29/453 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   + VL  + K  F P+ + + +LI        + +A  +   +   G      TY 
Sbjct: 358 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417

Query: 63  TLVNGLCRTSHTIVALNLFEEMAN-----GNGEF-GVVC--------------------- 95
           TL+ G C+      A  L +EM +       G F  V+C                     
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477

Query: 96  --EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
              P     TT+I GLCK G   KA EL  Q  +K    +  T  +++ G C A   +EA
Sbjct: 478 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            R+  E++ +G   + V++N ++   C   K+DEA   LD M++ G++PD +TY+ L+ G
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 597

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
                +V  A + +   +  G    V++YS++I+G CK +  E     + EM+SK ++P+
Sbjct: 598 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V++N L        ++  A +L ++M+  G++ ++ TY + I G+     + EA  LF 
Sbjct: 658 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 717

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R+   E ++  Y +LIDG  K G++     L R +    + PN +TY++MIGG   DG
Sbjct: 718 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 777

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            + +A  L  +M E  +VP+ IT+   I G+++
Sbjct: 778 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 215/439 (48%), Gaps = 41/439 (9%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  PDV+ +TT +N  C+      A+ LF +M     E GV   PN VT+ T+IDGL   
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME----EAGVA--PNVVTFNTVIDGLGMC 321

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G  D+A     +M ++ ++P ++TY+ +++G   AK   +A  +  EM  +G  PNV+ +
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++D   + G +++A  + DLM+  G+   + TYNTL+ G+C  G+ ++A+ L   M S
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441

Query: 233 MG---------------CKHTVFSYSI--------------------LINGYCKNKEIEG 257
           +G               C H +F  ++                    LI+G CK+ +   
Sbjct: 442 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 501

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           AL L+ + L+KG   D    N L  GL E  +++ AF++  E+   G   D  +Y T I 
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C    + EA      +     + D   Y+ LI GL    ++E A++ +       ++P
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 621

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +V TYS+MI G C   + ++ ++ F +M    V PN + ++ LIR + R    S  +EL 
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681

Query: 438 HKMKEINVMPDASIVSIVV 456
             MK   + P+++  + ++
Sbjct: 682 EDMKHKGISPNSATYTSLI 700



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 206/413 (49%), Gaps = 15/413 (3%)

Query: 74  TIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
           ++V  N F++       F VVC+   P+   +TT I+  CK G V++A +L  +M++  +
Sbjct: 248 SLVRANEFQKCCEA---FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV 304

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PNVVT+ +VI G      ++EA     +M+++G++P ++T+++++  L +  ++ +A  
Sbjct: 305 APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF 364

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +L  M + G  P+   YN L+D F   G +N A E+   M S G   T  +Y+ LI GYC
Sbjct: 365 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 424

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           KN + + A  L  EMLS G   +     ++   L      + A +   EM    ++    
Sbjct: 425 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 484

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
              T I GLCK+G   +A+EL+          D R  N+L+ GLC++G+L+ A  + + +
Sbjct: 485 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 544

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                V + V+Y+ +I G C   ++D+A     +M +  + P+  T+ +LI G   +N+ 
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 604

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDE 483
            + I+     K   ++PD    S+++D   K E            E QE  DE
Sbjct: 605 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE---------RTEEGQEFFDE 648



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 162/329 (49%), Gaps = 6/329 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S    +  + L   F  D  T  +L+ GLC   ++ EA  +  ++   GC  D  +Y
Sbjct: 497 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 556

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C       A    +EM           +P+  TY+ +I GL     V++A + 
Sbjct: 557 NTLISGCCGKKKLDEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQF 610

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
               K   + P+V TY+ +I G C A+   E +  F EMM + VQPN V +N ++   C+
Sbjct: 611 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 670

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++  A  L + M   G+ P++ TY +L+ G  +  RV  AK LF  M   G +  VF 
Sbjct: 671 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 730

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GY K  ++     L  EM SK + P+ + +  +  G      V  A +L +EM+
Sbjct: 731 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 790

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
             G+  D+ TY+ FI G  K G ++EA +
Sbjct: 791 EKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 146/298 (48%), Gaps = 6/298 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F +   IL      D V++ +LI G C + ++ EA     ++   G +PD +TY
Sbjct: 532 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+ GL   +    A+  +++    NG       P+  TY+ +IDG CK    ++ +E 
Sbjct: 592 SILICGLFNMNKVEEAIQFWDDCKR-NGML-----PDVYTYSVMIDGCCKAERTEEGQEF 645

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  KN++PN V Y  +IR +C +   + A  L  +M  +G+ PN  T+  ++  +  
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 705

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA  L + M   G+ P+ F Y  L+DG+   G++   + L   M S        +
Sbjct: 706 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 765

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           Y+++I GY ++  +  A  L +EM  KGI PD + +     G  +   V  AFK  DE
Sbjct: 766 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 8/221 (3%)

Query: 244 ILINGYCKNKEIEG---ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +LI  YC   + +G   AL ++  + +KG+ P     N L   L   ++ ++  + FD +
Sbjct: 206 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 265

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + GV+ D + + T I+  CK G + EAV+LF  +       ++  +N++IDGL   GR 
Sbjct: 266 CK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A      +    + P ++TYSI++ GL    ++  A  +  +M +    PNVI ++ L
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I  FI     +K IE+    K++ V    S+ S   + L K
Sbjct: 385 IDSFIEAGSLNKAIEI----KDLMVSKGLSLTSSTYNTLIK 421


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 244/492 (49%), Gaps = 19/492 (3%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           + VL  +  S     +  F+ LI+         +A   F+ +R F C+PD+F +  +++ 
Sbjct: 113 WKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHF 172

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           L R    ++AL ++ +M   N        P+ VTY  +I GLCK      A  L  +M D
Sbjct: 173 LVRKEAFLLALAVYNQMLKCN------LNPDVVTYGILIHGLCKTCKTQDALVLFDEMTD 226

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + I PN + Y+ V+ G C AK   +A+RLF +M   G   +++T+NV+++  CK+G +D+
Sbjct: 227 RGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDD 286

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  LL L+ + G       Y  L++G     R   A   +  M     K  V  Y+I+I 
Sbjct: 287 AFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIR 346

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G  +   +  AL+L  EM  +G++PD + +N L  G  ++  ++ A  L  E+ ++    
Sbjct: 347 GLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFP 406

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  TY   I G+CKNG I +A  +F  +  L C   +  +NSLI+GLCK+ RLE A  LF
Sbjct: 407 NNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLF 466

Query: 368 RSL-----PCGVL--------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
             +     P   L        V ++ +  +M+  LC  G + KA  L + + ++ V+P++
Sbjct: 467 YQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
            T+++LI GF +    +   +L  +M+    MPD+     ++D L +   + ++L  F  
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQ 586

Query: 475 HEQQEEVDESNV 486
             ++  V ES+ 
Sbjct: 587 MVKKGCVPESST 598



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 226/448 (50%), Gaps = 23/448 (5%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
              V  ++LK    PD VT+  LI GLC   +  +A  LF ++   G  P+   Y+ +++
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241

Query: 67  GLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL-LQ 124
           GLC+      A  LF +M A+G       C  + +TY  +++G CK G++D A  LL L 
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASG-------CNRDLITYNVLLNGFCKSGYLDDAFTLLQLL 294

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
            KD +I   V+ Y  +I G   A+ + EA   + +M+ + ++P+V+ + +++  L + G+
Sbjct: 295 TKDGHIL-GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGR 353

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           + EA  LL  M + G+RPD   YN L+ GFC  G ++ A+ L + +    C     +YSI
Sbjct: 354 VTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSI 413

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM---- 300
           LI G CKN  I  A  ++ EM   G  P VV  N+L  GL + +++E A  LF +M    
Sbjct: 414 LICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR 473

Query: 301 ---------QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
                    Q      D  + +  ++ LC++G I++A +L   L       DIR YN LI
Sbjct: 474 KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILI 533

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           +G CK G +  A +LF+ +     +P+ VTY  +I GL   G+ + A ++F  M +   V
Sbjct: 534 NGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCV 593

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHK 439
           P   T+  ++    R N  S  + +  K
Sbjct: 594 PESSTYKTIMTWSCRENNISLALSVWMK 621



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 207/450 (46%), Gaps = 55/450 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  + K       + +  LI GL    R  EA   + K+     +PDV  Y
Sbjct: 282 GYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLY 341

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++ GL +      AL L  EM     E G+   P+T+ Y  +I G C  G++D+A+ L
Sbjct: 342 TIMIRGLSQEGRVTEALTLLGEMT----ERGL--RPDTICYNALIKGFCDMGYLDEAESL 395

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L++   +  PN  TY+ +I G C     N+A+ +F EM   G  P+VVTFN +++ LCK
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCK 455

Query: 182 NGKMDEASRLLDLMIQHGVRPDAF--------------TYNTLLDGFCLTGRVNHAKELF 227
             +++EA RLL   ++   +P  F              +   +++  C +G +  A +L 
Sbjct: 456 ANRLEEA-RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLL 514

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
           + +   G    + +Y+ILING+CK   I GA  L+ EM  KG  PD V + TL  GL+  
Sbjct: 515 MQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRA 574

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL------------ 335
            + E A ++F++M + G   ++ TY+T +   C+   I  A+ ++               
Sbjct: 575 GRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKV 634

Query: 336 -----------------RILKCE-----FDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
                            R+L+ +     FD+  Y   + GL ++ R   A  +F  L   
Sbjct: 635 RVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDF 694

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
            +  +  +  ++IG LC    +D A D+FL
Sbjct: 695 KMNISSASCVMLIGRLCMVENLDMAMDVFL 724



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 167/372 (44%), Gaps = 35/372 (9%)

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           II  L KE   +   ++L ++K+  IK +   ++ +I  +  A    +A   F  M D  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
            +P++  FN+I+  L +      A  + + M++  + PD  TY  L+ G C T +   A 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF--- 281
            LF  M   G       YSI+++G C+ K+I  A  L+S+M + G   D++ +N L    
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGF 278

Query: 282 --------------------------------VGLFEIHQVERAFKLFDEMQRNGVAADT 309
                                            GLF   + E A   + +M R  +  D 
Sbjct: 279 CKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDV 338

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   I GL + G + EA+ L   +       D   YN+LI G C  G L+ A  L   
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLE 398

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +      PN  TYSI+I G+C +G ++KA+ +F +ME+   +P+V+TF+ LI G  + N 
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458

Query: 430 PSKVIELLHKMK 441
             +   L ++M+
Sbjct: 459 LEEARLLFYQME 470



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 143/295 (48%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           RLFI  +           ++I+ +L K    +   ++L  +    ++  +  ++ L++ +
Sbjct: 79  RLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAY 138

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
              G    A E F  M    CK  +F+++++++   + +    AL++Y++ML   + PDV
Sbjct: 139 SEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDV 198

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +  L  GL +  + + A  LFDEM   G+  +   Y   + GLC+   I +A  LF  
Sbjct: 199 VTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSK 258

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +R   C  D+  YN L++G CKSG L+ A  L + L     +  V+ Y  +I GL    +
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
            ++A   +  M    + P+V+ + ++IRG  +    ++ + LL +M E  + PD 
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDT 373


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 226/438 (51%), Gaps = 6/438 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT ++L+ GLC + R  EA ALF ++   G  P+  TY TL++ L +       L+L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM +     GVV +   VTYT ++D L K+G  D+ K+ L      N+ PN VTYT +I
Sbjct: 333 GEMVS----RGVVMD--LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C A + +EA+++ +EM ++ + PNVVTF+ +++   K G +D+A+    +M + G+ 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TY TL+DGF      + A E++  M   G K   F    L+NG  +N +IE A++L
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +    G+  D V + TL  GLF+   +  AFK   E+    +  D   Y  FI+ LC 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G   EA      +R +  + D   YN++I   C+ G    AL+L   +    + PN++T
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ ++ GL   G ++KA+ L  +M      P+ +T   +++   +      ++++   M 
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 442 EINVMPDASIVSIVVDLL 459
              +  D ++ + ++ +L
Sbjct: 687 NAGLHADITVYNTLLQVL 704



 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 226/516 (43%), Gaps = 81/516 (15%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP-DVFTYTT 63
           +H   VL  + K     D VT  +L+ GLC   ++  AAAL    R  G    DV  + T
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNT 174

Query: 64  LVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           L+ G CR   T  AL++ + M A G          + V Y T++ G C+ G VD A+ +L
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQG-------LPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             MK+  + PNV TYT  I  +C  K   EA  L+  M+  GV  +VVT + ++  LC++
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-------- 234
           G+  EA  L   M + G  P+  TY TL+D     GR      L   M S G        
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 235 ---------------CKHTV------------FSYSILINGYCKNKEIEGALSLYSEMLS 267
                           K T+             +Y++LI+  CK   ++ A  +  EM  
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 268 K-----------------------------------GIKPDVVIHNTLFVGLFEIHQVER 292
           K                                   GI P+VV + TL  G F+    + 
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A +++ +M   GV  + +   + ++GL +NG I EA+ LF          D   Y +LID
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GL K+G +  A +  + L    ++P+ V Y++ I  LC  G+  +A+    +M    + P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  T++ +I    R  E +K ++LLH+MK  ++ P+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 236/513 (46%), Gaps = 36/513 (7%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL  + +   +P+ VTF+S+I G      + +A      ++  G  P+V TY TL++G  
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460

Query: 70  RTSHTIVALNLFEEM---------------ANGNGEFGVVCEP--------------NTV 100
           +      AL ++ +M                NG  + G + E               + V
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            YTT+IDGL K G +  A +   ++ D+N+ P+ V Y   I   C    + EAK    EM
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            + G++P+  T+N ++   C+ G+  +A +LL  M    ++P+  TYNTL+ G   TG V
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             AK L   M S G   +  ++  ++    +++ ++  L ++  M++ G+  D+ ++NTL
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L       +A  + +EM  +G+A DT T+   I G CK+ ++  A   +  +     
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             +I  +N+L+ GL   GR+  A  +   +    L PN +TY I+  G        +A  
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL-- 458
           L+ +M     VP V T++ LI  F +    ++  EL   M++  V P +    I+V    
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWY 880

Query: 459 -LAKNEISLNS----LPSFTVHEQQEEVDESNV 486
            LA+ + S N+    +  F+    Q ++  S V
Sbjct: 881 DLAREQKSQNTYFTEIYCFSASRHQSKIAISRV 913



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 199/446 (44%), Gaps = 18/446 (4%)

Query: 19  FTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           F P D  +  +L+   C    +  A AL    R     P    Y  L+  L   +H   A
Sbjct: 68  FRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAH---A 119

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP-NVVT 136
             +  EM      F      + VT  T++ GLC+ G VD A  L    +   I   +V+ 
Sbjct: 120 PAVLAEMCKRGVPF------DGVTVNTLLAGLCRNGQVDAAAAL--ADRGGGIHALDVIG 171

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           + ++I G+C   D   A  +   M  QG+  +VV +N ++   C+ G++D A  +LD+M 
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + GV P+  TY   +  +C T  V  A +L+  M   G    V + S L+ G C++    
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A +L+ EM   G  P+ V + TL   L +  + +    L  EM   GV  D  TY   +
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D L K G   E  +            +   Y  LID LCK+  ++ A ++   +    + 
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PNVVT+S +I G    G +DKA +    M+E  + PNV+T+  LI GF +       +E+
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
            H M    V  +  IV  +V+ L +N
Sbjct: 472 YHDMLCEGVKVNKFIVDSLVNGLRQN 497



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 6/175 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G      VVL  +L S   PD +TF +LI G C  S +  A A + ++      P++ T+
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ GL        A  +  EM           EPN +TY  +  G  K+    +A  L
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSG------LEPNNLTYDILATGHGKQSNKVEAMRL 821

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
             +M  K   P V TY ++I  F  A    +AK LF +M  +GV P   T+++++
Sbjct: 822 YCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 7/159 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            + + F    ++L    +P+  TF +L+ GL +  RI EA  +  ++   G EP+  TY 
Sbjct: 744 HLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L  G  + S+ + A+ L+ EM  G G       P   TY  +I    K G + +AKEL 
Sbjct: 804 ILATGHGKQSNKVEAMRLYCEMV-GKGFV-----PKVSTYNALISDFTKAGMMTQAKELF 857

Query: 123 LQMKDKNIKPNVVTYTSVIRGFC-YAKDWNEAKRLFIEM 160
             M+ + + P   TY  ++ G+   A++       F E+
Sbjct: 858 KDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYFTEI 896



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 23/154 (14%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     VL  + KS   P+ +T+  L  G   +S  +EA  L+ ++   G  P V T
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++   +      A  LF++M     + GV   P + TY  ++      G+ D A+E
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQ----KRGV--HPTSCTYDILV-----SGWYDLARE 885

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
                K +N      TY + I  +C++   +++K
Sbjct: 886 ----QKSQN------TYFTEI--YCFSASRHQSK 907


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 226/438 (51%), Gaps = 6/438 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT ++L+ GLC + R  EA ALF ++   G  P+  TY TL++ L +       L+L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM +     GVV +   VTYT ++D L K+G  D+ K+ L      N+ PN VTYT +I
Sbjct: 333 GEMVS----RGVVMD--LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C A + +EA+++ +EM ++ + PNVVTF+ +++   K G +D+A+    +M + G+ 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TY TL+DGF      + A E++  M   G K   F    L+NG  +N +IE A++L
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +    G+  D V + TL  GLF+   +  AFK   E+    +  D   Y  FI+ LC 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G   EA      +R +  + D   YN++I   C+ G    AL+L   +    + PN++T
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ ++ GL   G ++KA+ L  +M      P+ +T   +++   +      ++++   M 
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 442 EINVMPDASIVSIVVDLL 459
              +  D ++ + ++ +L
Sbjct: 687 NAGLHADITVYNTLLQVL 704



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 240/533 (45%), Gaps = 72/533 (13%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL  + +   +P+ VTF+S+I G      + +A      ++  G  P+V TY TL++G  
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460

Query: 70  RTSHTIVALNLFEEM---------------ANGNGEFGVVCEP--------------NTV 100
           +      AL ++ +M                NG  + G + E               + V
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            YTT+IDGL K G +  A +   ++ D+N+ P+ V Y   I   C    + EAK    EM
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            + G++P+  T+N ++   C+ G+  +A +LL  M    ++P+  TYNTL+ G   TG V
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             AK L   M S G   +  ++  ++    +++ ++  L ++  M++ G+  D+ ++NTL
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L       +A  + +EM  +G+A DT T+   I G CK+ ++  A   +  +     
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 341 EFDIRAYNSLIDGLCKSGRL----EIALELFRS--------------------------- 369
             +I  +N+L+ GL   GR+     + +E+ +S                           
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 370 LPCGVL----VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           L C ++    VP V TY+ +I      G M +A++LF DM++  V P   T+D+L+ G+ 
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           RI   ++V + L  MKE    P    +S +    +K        P  T   Q+
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK--------PGMTWQAQR 925



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 226/516 (43%), Gaps = 81/516 (15%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP-DVFTYTT 63
           +H   VL  + K     D VT  +L+ GLC   ++  AAAL    R  G    DV  + T
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNT 174

Query: 64  LVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           L+ G CR   T  AL++ + M A G          + V Y T++ G C+ G VD A+ +L
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQG-------LPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             MK+  + PNV TYT  I  +C  K   EA  L+  M+  GV  +VVT + ++  LC++
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-------- 234
           G+  EA  L   M + G  P+  TY TL+D     GR      L   M S G        
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 235 ---------------CKHTV------------FSYSILINGYCKNKEIEGALSLYSEMLS 267
                           K T+             +Y++LI+  CK   ++ A  +  EM  
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 268 K-----------------------------------GIKPDVVIHNTLFVGLFEIHQVER 292
           K                                   GI P+VV + TL  G F+    + 
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A +++ +M   GV  + +   + ++GL +NG I EA+ LF          D   Y +LID
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GL K+G +  A +  + L    ++P+ V Y++ I  LC  G+  +A+    +M    + P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  T++ +I    R  E +K ++LLH+MK  ++ P+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 199/446 (44%), Gaps = 18/446 (4%)

Query: 19  FTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           F P D  +  +L+   C    +  A AL    R     P    Y  L+  L   +H   A
Sbjct: 68  FRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAH---A 119

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP-NVVT 136
             +  EM      F      + VT  T++ GLC+ G VD A  L    +   I   +V+ 
Sbjct: 120 PAVLAEMCKRGVPF------DGVTVNTLLAGLCRNGQVDAAAAL--ADRGGGIHALDVIG 171

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           + ++I G+C   D   A  +   M  QG+  +VV +N ++   C+ G++D A  +LD+M 
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + GV P+  TY   +  +C T  V  A +L+  M   G    V + S L+ G C++    
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A +L+ EM   G  P+ V + TL   L +  + +    L  EM   GV  D  TY   +
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D L K G   E  +            +   Y  LID LCK+  ++ A ++   +    + 
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PNVVT+S +I G    G +DKA +    M+E  + PNV+T+  LI GF +       +E+
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
            H M    V  +  IV  +V+ L +N
Sbjct: 472 YHDMLCEGVKVNKFIVDSLVNGLRQN 497



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 8/272 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAA-LFTKLRVFGCEPDVFT 60
           G V     +L  ++ + F+P ++T   +++  C++SR ++    +   +   G   D+  
Sbjct: 638 GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA-CSQSRRLDVILDIHEWMMNAGLHADITV 696

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+  LC    T  A  + EEM       G    P+T+T+  +I G CK   +D A  
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEM------LGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              QM  +NI PN+ T+ +++ G        EA  + IEM   G++PN +T++++     
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHG 810

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K     EA RL   M+  G  P   TYN L+  F   G +  AKELF  M+  G   T  
Sbjct: 811 KQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSC 870

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           +Y IL++G+ + +          +M  KG  P
Sbjct: 871 TYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 140/334 (41%), Gaps = 6/334 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  +    +L  +  S   P+ +T+ +L+ GL     + +A  L  ++   G  P   T+
Sbjct: 603 GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTH 662

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++    ++    V L++ E M N           +   Y T++  LC  G   KA  +
Sbjct: 663 RRVLQACSQSRRLDVILDIHEWMMNAG------LHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M    I P+ +T+ ++I G C +   + A   + +M+ Q + PN+ TFN ++  L  
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA  +L  M + G+ P+  TY+ L  G         A  L+  M   G    V +
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+ + K   +  A  L+ +M  +G+ P    ++ L  G   I       K   +M+
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMK 896

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             G +    T         K G   +A  L   L
Sbjct: 897 EKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 6/157 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     VL  + KS   P+ +T+  L  G   +S  +EA  L+ ++   G  P V T
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++   +      A  LF++M     + GV   P + TY  ++ G  +     + K+
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQ----KRGV--HPTSCTYDILVSGWSRIRNGTEVKK 890

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            L  MK+K   P+  T + + R F       +A+RL 
Sbjct: 891 CLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 245/536 (45%), Gaps = 80/536 (14%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P  ++   L+  L    +I  A A++  L+  G  P+ +TY   +  LCR  +   A+
Sbjct: 188 FVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAV 247

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++F EM     E GV   PN VT +T I+GLC     D   E L  ++  N   +   YT
Sbjct: 248 DVFREME----EAGV--NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYT 301

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +VIRGFC      EA+ +FI+M+++G+ P+   +  ++   CK G + +A  L + M+ +
Sbjct: 302 AVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSN 361

Query: 199 GVRP-----------------------------------DAFTYNTLLDGFCLTGRVNHA 223
           G++                                    D   YN ++D  C  G+V  A
Sbjct: 362 GIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEA 421

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            EL   M+       V  Y+ LI GYC   ++  A +++ EM  +GI+PD+V +N L  G
Sbjct: 422 VELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGG 481

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                  + A +L D +   G+  ++ T+   I+GLC  G + EA    +TL   KC   
Sbjct: 482 FSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED-KC--- 537

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLP-CGVLV-------------------------- 376
           +  Y++++DG CK+     A ELF  L   G+LV                          
Sbjct: 538 LENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLE 597

Query: 377 --------PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
                   PN + Y  +IG  C DG M +A+ +F  + E  + P+VIT+ M+I G+ R+N
Sbjct: 598 RMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVN 657

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDES 484
              +  ++ + MKE  + PD    ++V+D  +K  + +     F+   ++E++D S
Sbjct: 658 CLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDAS 713



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 223/483 (46%), Gaps = 52/483 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+AVT ++ I+GLC+  R          LR      D F YT ++ G C       A ++
Sbjct: 260 PNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDV 319

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M N     G+   P+   Y  +I   CK G + +A  L   M    IK N V  +S+
Sbjct: 320 FIDMVNE----GIA--PDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSI 373

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           ++  C     +E    F E  D G+  + V +N+++D LCK GK++EA  LL+ M    +
Sbjct: 374 LQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRM 433

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D   Y TL+ G+CL G++  AK +F  M+  G +  + +Y+IL+ G+ +N   + AL 
Sbjct: 434 SLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALE 493

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE----------------------------- 291
           L   + ++G+KP+   HN +  GL    +V+                             
Sbjct: 494 LLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANF 553

Query: 292 --RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
             +A++LF  + + G+     +    +  LC  G   +A+ L   +  L  E +   Y  
Sbjct: 554 TRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGK 613

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI   C+ G ++ A  +F  L    + P+V+TY++MI G C    + +ARD+F DM+E  
Sbjct: 614 LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERG 673

Query: 410 VVPNVITFDMLIRGFIRIN---------------EPSKVIELLHKMKEINVMPDASIVSI 454
           + P+VIT+ +++ G  ++N               E         +MKE+ + PD    ++
Sbjct: 674 IKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTV 733

Query: 455 VVD 457
           ++D
Sbjct: 734 LID 736



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 252/544 (46%), Gaps = 100/544 (18%)

Query: 2   GRVSHGFVVLG----RILKSCFTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G  SH    LG    R L++   P D   +T++I+G C+E ++ EA  +F  +   G  P
Sbjct: 271 GLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAP 330

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNG----------------EFGVVCEP--- 97
           D + Y  L++  C+  + + A+ L  +M + NG                E G+  E    
Sbjct: 331 DGYIYGALIHAYCKAGNLLQAVALHNDMVS-NGIKTNCVIVSSILQCLCEMGMASEVVDQ 389

Query: 98  -----------NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                      + V Y  ++D LCK G V++A ELL +MK + +  +VV YT++I G+C 
Sbjct: 390 FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCL 449

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
                +AK +F EM ++G++P++VT+N+++    +NG   EA  LLD +   G++P++ T
Sbjct: 450 QGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSAT 509

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK------------- 253
           +N +++G C+ G+V  A+    ++E       + +YS +++GYCK               
Sbjct: 510 HNRIIEGLCMAGKVKEAEAFLNTLED----KCLENYSAMVDGYCKANFTRKAYELFSRLS 565

Query: 254 ----------------------EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
                                 E + AL L   ML+  ++P+ +++  L         ++
Sbjct: 566 KQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMK 625

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           RA  +FD +   G+  D  TY   I+G C+   + EA ++F+ ++    + D+  Y  ++
Sbjct: 626 RAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVL 685

Query: 352 DGLCKSGRLEIALELFRSLPCGV--------------------LVPNVVTYSIMIGGLCN 391
           DG  K     + L++ RSL                        + P+VV Y+++I   C 
Sbjct: 686 DGHSK-----VNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCK 740

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
              +  A +L+ +M    + P+++T+  L+       +  + I L+++M    + PD+  
Sbjct: 741 TNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRA 800

Query: 452 VSIV 455
           +S++
Sbjct: 801 MSVL 804



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 199/404 (49%), Gaps = 25/404 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L  +     + D V +T+LI G C + ++++A  +F +++  G EPD+ T
Sbjct: 415 LGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVT 474

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  LV G  R      AL L + +    G  G+  +PN+ T+  II+GLC  G V +A+ 
Sbjct: 475 YNILVGGFSRNGLKKEALELLDCI----GTQGL--KPNSATHNRIIEGLCMAGKVKEAEA 528

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L  ++DK ++     Y++++ G+C A    +A  LF  +  QG+     +   ++  LC
Sbjct: 529 FLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLC 584

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+ D+A  LL+ M+   V P+   Y  L+  FC  G +  A+ +F  +   G    V 
Sbjct: 585 MEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVI 644

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH-QVERAFK---- 295
           +Y+++INGYC+   +  A  ++++M  +GIKPDV+ +  +  G  +++ ++ R+ +    
Sbjct: 645 TYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKG 704

Query: 296 ----------LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                      + EM+  G+  D   Y   ID  CK   + +A+ L+  +     + DI 
Sbjct: 705 SEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIV 764

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
            Y +L+   C  G ++ A+ L   +    + P+    S++  G+
Sbjct: 765 TYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGI 808



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 212/439 (48%), Gaps = 22/439 (5%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGE----------F 91
           A + FT+L+  G + +V TY  L+  LCR        +L  E+  G+ E          F
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV-GSKESVLGFDITALF 138

Query: 92  GVV-------CEPNTVTYTTIIDGLCKE----GFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            V+          ++     ++D L K     G  D+A + L Q K +   P++++   +
Sbjct: 139 DVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFL 198

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +         + A  ++  +   G+ PN  T+ + +  LC+ G  +EA  +   M + GV
Sbjct: 199 MNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGV 258

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+A T +T ++G C   R +   E   ++ +       F+Y+ +I G+C   +++ A  
Sbjct: 259 NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAED 318

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ +M+++GI PD  I+  L     +   + +A  L ++M  NG+  +     + +  LC
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLC 378

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G   E V+ F   R      D   YN ++D LCK G++E A+EL   +    +  +VV
Sbjct: 379 EMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVV 438

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            Y+ +I G C  G++  A+++F +M+E  + P+++T+++L+ GF R     + +ELL  +
Sbjct: 439 HYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCI 498

Query: 441 KEINVMPDASIVSIVVDLL 459
               + P+++  + +++ L
Sbjct: 499 GTQGLKPNSATHNRIIEGL 517


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 216/448 (48%), Gaps = 12/448 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGRV      L  +++  F  D  T T +I   C +  +      F K+   G  P+V  
Sbjct: 237 MGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVIN 296

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T L+NGLC+      A  L EEM     +      PN  T+TT+IDGLCK+G+ +KA  
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWK------PNVYTHTTLIDGLCKKGWTEKAFR 350

Query: 121 LLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L L++ +    KPNV TYT++I G+C     N A+ L   M +QG+ PN  T+  ++D  
Sbjct: 351 LFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGH 410

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G    A  L+DLM + G  P+ +TYN ++DG C  G ++ A  L   +   G +   
Sbjct: 411 CKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADG 470

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+IL++ +C+  +   +L  +++ML  G  PD+  + TL        Q++ + +LF+E
Sbjct: 471 VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEE 530

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
               G+     TY + I G C+ G    AV+LF  +    C  D   Y +LI GLCK  +
Sbjct: 531 AVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESK 590

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A  L+ ++    L P  VT   +    C       A ++   +E+   +  V T   
Sbjct: 591 LDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNT--- 647

Query: 420 LIRGFIRINEPSKVIELLHKM--KEINV 445
           L+R      +        HK+  KE NV
Sbjct: 648 LVRKLCSEGKLDMAALFFHKLLDKEPNV 675



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 207/434 (47%), Gaps = 7/434 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++       ++ EA  +  +++  G  P   T   +++         +A N+F EM    
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMC--- 216

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
            + GV   P+ V++  ++   C  G V +A+  L  M ++    +  T T +I  FC   
Sbjct: 217 -QRGV--SPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKG 273

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
             N     F +M++ G+ PNV+ F  +++ LCK G + +A  LL+ M++ G +P+ +T+ 
Sbjct: 274 YVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHT 333

Query: 209 TLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           TL+DG C  G    A  LF+ +  S G K  V +Y+ +INGYCK  ++  A  L S M  
Sbjct: 334 TLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQE 393

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G+ P+   + TL  G  ++    RA++L D M + G + + +TY   IDGLCK G + E
Sbjct: 394 QGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDE 453

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A  L + + +   + D   Y  L+   C+      +L  F  +      P++ +Y+ +I 
Sbjct: 454 AYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIS 513

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
             C   QM ++  LF +     ++P   T+  +I G+ R    S  ++L  +M      P
Sbjct: 514 TFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAP 573

Query: 448 DASIVSIVVDLLAK 461
           D+     ++  L K
Sbjct: 574 DSITYGALISGLCK 587



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 197/409 (48%), Gaps = 11/409 (2%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A  +F ++   G  PD  ++  +V   C     + A    E   N   E G + +    T
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA----ERWLNAMVERGFIVD--NAT 261

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
            T IID  C++G+V++      +M +  + PNV+ +T++I G C      +A  L  EM+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +G +PNV T   ++D LCK G  ++A RL L L+   G +P+  TY  +++G+C   ++
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A+ L   M+  G      +Y+ LI+G+CK      A  L   M  +G  P++  +N +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +   ++ A++L +++  +G+ AD  TY   +   C+      ++  F+  ++LK 
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFN--KMLKV 499

Query: 341 EF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            F  DI +Y +LI   C+  +++ +  LF       L+P   TY+ MI G C  G    A
Sbjct: 500 GFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLA 559

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
             LF  M  +   P+ IT+  LI G  + ++      L   M +  + P
Sbjct: 560 VKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 176/354 (49%), Gaps = 1/354 (0%)

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           + G + +A  ++++M+++ + P+  T   V+           A+ +F+EM  +GV P+ V
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCV 225

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           +F +++   C  G++ EA R L+ M++ G   D  T   ++D FC  G VN     F  M
Sbjct: 226 SFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
             MG    V +++ LING CK   I+ A  L  EM+ +G KP+V  H TL  GL +    
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 291 ERAFKLFDEMQR-NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           E+AF+LF ++ R +G   +  TY   I+G CK   +  A  L   ++      +   Y +
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LIDG CK G    A EL   +      PN+ TY+ +I GLC  G +D+A  L   +  + 
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +  + +T+ +L+    R  + ++ +   +KM ++   PD    + ++    + +
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 167/347 (48%), Gaps = 1/347 (0%)

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +KN++        ++  F       EA  + +EM +QG+ P+  T N ++D     G ++
Sbjct: 147 NKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVE 206

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  +   M Q GV PD  ++  ++   C  GRV  A+    +M   G      + +++I
Sbjct: 207 IAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLII 266

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           + +C+   +   +  + +M+  G+ P+V+    L  GL +   +++AF+L +EM R G  
Sbjct: 267 DAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK 326

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
            + +T+ T IDGLCK G+  +A  LF  L R    + ++  Y ++I+G CK  +L  A  
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEM 386

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           L   +    LVPN  TY+ +I G C  G   +A +L   M +    PN+ T++ +I G  
Sbjct: 387 LLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLC 446

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           +     +   LL+K+    +  D    +I++ +  +   +  SL  F
Sbjct: 447 KKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFF 493



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 26/142 (18%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T+TS+I G C       A  LF ++   GC PD  TY  L++GLC+ S    A NL
Sbjct: 538 PTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597

Query: 81  FEEMANGN------------GEFGVVCEPNTV--------------TYTTIIDGLCKEGF 114
           ++ M +               E+    + +T               T  T++  LC EG 
Sbjct: 598 YDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGK 657

Query: 115 VDKAKELLLQMKDKNIKPNVVT 136
           +D A     ++ DK    N VT
Sbjct: 658 LDMAALFFHKLLDKEPNVNRVT 679


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 219/447 (48%), Gaps = 10/447 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD   F SL+  L     +     LFT +R    +PDV TY  L+NGLC++ H   AL 
Sbjct: 128 APDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALK 187

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI---KPNVVT 136
           + + M++   +   VC P+     T++DGLCK G + +A  + +  + +++    PN VT
Sbjct: 188 VLDRMSSPGSD---VC-PDIAILNTVVDGLCKIGRLQQAI-IFVDERMRHVHGCAPNAVT 242

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL--DL 194
           Y  +   FC   D   A ++   M  +GV PNV+T N I+  LC+ G++  A        
Sbjct: 243 YNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKR 302

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
            +    R +A TY+TL   F     V+ A ELF  M   G +     Y  +I+G  +   
Sbjct: 303 TVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGR 362

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  A +  + M   G K D   +N L  G     ++  A++L +EM+  G+  D +TY T
Sbjct: 363 LLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNT 422

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            + GLCK G      EL   +    C+  +  + +L+ G CK+G+ + AL +FRS+    
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEAR 482

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + PN V Y+ +I  LC   ++D A  LF +M E  V  NV T++ L++G        K  
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAF 542

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
           EL+ +M+E    P+   V ++++ L +
Sbjct: 543 ELMDRMREERCTPNYVTVDVLMEWLPE 569



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 217/470 (46%), Gaps = 28/470 (5%)

Query: 14  ILKSCFTPDAVTFT--SLIKGLCAE--SRIMEAAALFTKLRVFGCE----------PDVF 59
           IL    TP A T +   L  GL +E  + I E +  FT   +              P   
Sbjct: 40  ILLHGHTPSAATLSLLRLSPGLASELYALIAEPSHAFTPASLASLHSLAARHRIPPPSAL 99

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
             + LV     +S    A  L + +A+G         P+   + +++  L + G +    
Sbjct: 100 LLSKLVRRF--SSPAEAAGFLRDSLASG------APAPDISIFNSLLTALGRAGNLRGMT 151

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMD 177
           EL   M+D ++KP+VVTY  ++ G C +    +A ++   M   G  V P++   N ++D
Sbjct: 152 ELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVD 211

Query: 178 ELCKNGKMDEASRLLDLMIQH--GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
            LCK G++ +A   +D  ++H  G  P+A TYN L D FC  G +  A ++   ME  G 
Sbjct: 212 GLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGV 271

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLS--KGIKPDVVIHNTLFVGLFEIHQVERA 293
              V + + +I G C+   +  AL  + E  +     + + V ++TL       + V+ A
Sbjct: 272 APNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMA 331

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            +LF EM  +G   D   Y T I GL + G +++A     +++    + D +AYN LI G
Sbjct: 332 MELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGG 391

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            C+  +L  A EL   +    L P+V TY+ ++ GLC  G      +L   M ++   P+
Sbjct: 392 FCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPS 451

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           V+TF  L+ G+ +  +  + + +   M E  + P+  I + ++D L K+ 
Sbjct: 452 VVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSR 501



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 190/403 (47%), Gaps = 14/403 (3%)

Query: 2   GRVSHGFVVLGRILK--SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR---VFGCEP 56
           G V     VL R+    S   PD     +++ GLC   R+ +A  +F   R   V GC P
Sbjct: 180 GHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAI-IFVDERMRHVHGCAP 238

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           +  TY  L +  CR     +A  +   M     + GV   PN +T  TII GLC+ G V 
Sbjct: 239 NAVTYNCLADAFCRVGDIGMACKIVARME----KEGVA--PNVITMNTIIGGLCRVGRVG 292

Query: 117 KAKELLLQMKD--KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
            A E   + +      + N VTY+++   F +  + + A  LF EM D G +P+ V +  
Sbjct: 293 AALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFT 352

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  L + G++ +A      M + G + DA  YN L+ GFC   +++ A EL   M+ +G
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            +  V++Y+ L++G CK  +      L   M+  G +P VV   TL  G  +  + + A 
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEAL 472

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           ++F  M    +  +T  Y T ID LCK+  +  A++LF  +R      ++  YN+L+ GL
Sbjct: 473 RIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGL 532

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                 E A EL   +      PN VT  +++  L   G+ ++
Sbjct: 533 QDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETER 575


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 137/412 (33%), Positives = 213/412 (51%), Gaps = 14/412 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++     ++ +I  +  TP   T+ +L+ GLC   R+ EA  L  K+   GC PDV TYT
Sbjct: 274 KIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 333

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++GL +   +  A  LF+EMA+       VC      YT +I GL + G + +A  + 
Sbjct: 334 SLIDGLGKEKRSFEAYKLFKEMASRGLALDTVC------YTALIRGLLQTGKIPQASSVY 387

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M      P+VVT +++I G   A     A R+F  M  +G+ PN V ++ ++  LCK 
Sbjct: 388 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 447

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            KMD A  +L  M +    PD  TYN L+DG C +G V  A+  F  M   GCK  V++Y
Sbjct: 448 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 507

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +ILI+G CK    + A  +  +M S        ++++L  GL +  ++E    LF EM+R
Sbjct: 508 NILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEMER 562

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +GV A++ T    I  LCK   + EAV LF+ +R         AYNS+I  L KSG++  
Sbjct: 563 SGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISALIKSGKVNE 620

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
              +++ +      P+ VTY+ ++ G+    +MD+A   +L+M     VP V
Sbjct: 621 GQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPV 671



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 215/451 (47%), Gaps = 13/451 (2%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPDVFTYTTLVNGLCRTSH 73
           L + F PD  T+  LI G C      EA A+  ++   FG  P + T+  +++GLC++  
Sbjct: 146 LATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGK 205

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
            + A++ FE +             +  T++ +I+GL K G + +A  L  +        +
Sbjct: 206 VLAAMDHFEAVRRS-------MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTID 258

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           + TYT+++      K   EA  L  ++   G  P + T+N +++ LCK G+++EA  LL 
Sbjct: 259 IHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 318

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            ++ +G  PD  TY +L+DG     R   A +LF  M S G       Y+ LI G  +  
Sbjct: 319 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTG 378

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +I  A S+Y  M S G  PDVV  +T+  GL +  ++  A ++F  M+  G+A +   Y 
Sbjct: 379 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 438

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I GLCK   +  A+E+   ++   C  D   YN LIDGLCKSG +E A   F  +   
Sbjct: 439 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 498

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P+V TY+I+I GLC  G  D A  +  DM  +  V     +  L+ G  +  +    
Sbjct: 499 GCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGLCKSGKLEGG 553

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             L H+M+   V    +   ++  L   N +
Sbjct: 554 CMLFHEMERSGVANSQTRTRLIFHLCKANRV 584



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 172/365 (47%), Gaps = 35/365 (9%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +V T  +++  F   K   EA  L    +    +P+V T+NV++   C   + +EA  ++
Sbjct: 118 SVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI 177

Query: 193 DLMIQH-GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME-------------------- 231
             M +  GV P   T+N +L G C +G+V  A + F ++                     
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKA 237

Query: 232 --------------SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
                         + GC   + +Y+ ++N   KNK+I+ A++L  ++ + G  P +  +
Sbjct: 238 GMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATY 297

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N L  GL ++ ++E A  L  ++  NG   D  TY + IDGL K     EA +LF  +  
Sbjct: 298 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAS 357

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                D   Y +LI GL ++G++  A  +++++     VP+VVT S MI GL   G++  
Sbjct: 358 RGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 417

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  +F  ME   + PN + +  LI G  +  +    +E+L +MK+    PD    +I++D
Sbjct: 418 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 477

Query: 458 LLAKN 462
            L K+
Sbjct: 478 GLCKS 482



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 161/330 (48%), Gaps = 4/330 (1%)

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQ--GVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           ++  +V++ F   KD + A  LF  +     G Q +V T N ++D   +  +  EA  LL
Sbjct: 83  ISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLL 142

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES-MGCKHTVFSYSILINGYCK 251
              +    RPD  T+N L+ G+CL      A  +   ME   G   ++ +++++++G CK
Sbjct: 143 KNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCK 202

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           + ++  A+  + E + + +       + L  GL +   + +A  L  E   NG   D  T
Sbjct: 203 SGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHT 261

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   ++ L KN  I EAV L   +    C   I  YN+L++GLCK GRLE A++L R + 
Sbjct: 262 YTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 321

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                P+VVTY+ +I GL  + +  +A  LF +M    +  + + +  LIRG ++  +  
Sbjct: 322 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIP 381

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +   +   M     +PD   +S ++D L+K
Sbjct: 382 QASSVYKTMTSHGCVPDVVTLSTMIDGLSK 411



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 4/253 (1%)

Query: 223 AKELFVSMES--MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           A ELF  + S   G +H+V + + L++ + + K    A +L    L+   +PDV   N L
Sbjct: 101 AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVL 160

Query: 281 FVGLFEIHQVERAFKLFDEMQRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
             G     + E AF +  EM+ + GVA    T+   + GLCK+G ++ A++ F  +R   
Sbjct: 161 ITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVR-RS 219

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
                  ++ LI+GL K+G +  A  L +         ++ TY+ ++  L  + ++ +A 
Sbjct: 220 MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAV 279

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            L   +  N   P + T++ L+ G  ++    + I+LL K+ +    PD    + ++D L
Sbjct: 280 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 339

Query: 460 AKNEISLNSLPSF 472
            K + S  +   F
Sbjct: 340 GKEKRSFEAYKLF 352



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 58/230 (25%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L ++ K+  TPD +T+  LI GLC    +  A A F ++   GC+PDV+TY  L++GLC
Sbjct: 456 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLC 515

Query: 70  RTSHTIVALN------------------------------LFEEM-----ANGNGEFGVV 94
           +  +T  A                                LF EM     AN      ++
Sbjct: 516 KAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLI 575

Query: 95  ---CEPNTV-------------------TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
              C+ N V                    Y +II  L K G V++ + +  +M  +  KP
Sbjct: 576 FHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKP 634

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           + VTY +++ G   A   + A   ++EM  +G  P V   + + D+  K+
Sbjct: 635 DRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLADDRLKD 684


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 219/439 (49%), Gaps = 9/439 (2%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            P  VT+ +L+     E R  + A L  ++  R  GC P+  TY  ++ GL R      A 
Sbjct: 1117 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 1176

Query: 79   NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
             L E M        +  + ++ TY  +I GL   G V K  +L L+M+++ I P VVTY 
Sbjct: 1177 ELVEGMR-------LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 1229

Query: 139  SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            ++I G   +     A+  F EM   G+ P+V+T+N +++  CK G + EA  L   + + 
Sbjct: 1230 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 1289

Query: 199  GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            G+ P   TYN L+DG+C  G +  A+ L   M   GC   V +Y+IL+ G    + +  A
Sbjct: 1290 GLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMA 1349

Query: 259  LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
               + EMLSKG++PD   +NT       +  + RAF+L + +   G+++DT TY   I G
Sbjct: 1350 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHG 1409

Query: 319  LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            LCK G + +A EL   +     + D   Y  LI   C+ G L  A ++F ++    L+P+
Sbjct: 1410 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 1469

Query: 379  VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
             VT++++I   C  G +  A   F  M E  V PN IT+++LI    R+          H
Sbjct: 1470 AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 1529

Query: 439  KMKEINVMPDASIVSIVVD 457
            +M E  ++ +    ++++D
Sbjct: 1530 EMLERGLVANKYTYTLLID 1548



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 224/461 (48%), Gaps = 9/461 (1%)

Query: 20   TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
             PD      +++ L   +R  +  A+  ++   G EP + TY TL++   +         
Sbjct: 1081 APDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAM 1140

Query: 80   LFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L +EM   G+G     C PN VTY  +I GL ++G +++A EL+  M+  + K +  TY 
Sbjct: 1141 LLKEMETRGSG-----CLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYN 1194

Query: 139  SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
             +I G        +   L +EM ++G+ P VVT+N ++  L ++G ++ A      M   
Sbjct: 1195 PLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAM 1254

Query: 199  GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            G+ PD  TYN+LL+G+C  G +  A  LF  +   G   TV +Y+ILI+GYC+  ++E A
Sbjct: 1255 GLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEA 1314

Query: 259  LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
              L  EM  +G  P+V  +  L  G   +  +  A + FDEM   G+  D + Y T I  
Sbjct: 1315 RILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICA 1374

Query: 319  LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
                G I  A EL   L +     D   YN LI GLCK+G L+ A EL   +    L P+
Sbjct: 1375 ELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 1434

Query: 379  VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
             +TY+ +I   C  G + +AR +F +M  + ++P+ +TF ++I  + R            
Sbjct: 1435 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 1494

Query: 439  KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
            KM E  V P+    ++++  L +  +    L S   HE  E
Sbjct: 1495 KMLEEGVEPNEITYNVLIHALCR--MGRTQLASHHFHEMLE 1533



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 195/402 (48%), Gaps = 6/402 (1%)

Query: 23   AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
            + T+  LI GL A   + +   L  ++   G  P V TY  +++GL ++     A   F 
Sbjct: 1190 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 1249

Query: 83   EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
            EM       G++  P+ +TY ++++G CK G + +A  L   ++   + P V+TY  +I 
Sbjct: 1250 EMR----AMGLL--PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILID 1303

Query: 143  GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
            G+C   D  EA+ L  EM +QG  PNV T+ ++M        +  A    D M+  G++P
Sbjct: 1304 GYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQP 1363

Query: 203  DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
            D F YNT +    + G +  A EL   +   G      +Y+ILI+G CK   ++ A  L 
Sbjct: 1364 DCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQ 1423

Query: 263  SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
             +M+S G++PD + +  L     E   +  A K+F+ M  +G+     T+   I   C+ 
Sbjct: 1424 MKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRR 1483

Query: 323  GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
            G +  A   F  +     E +   YN LI  LC+ GR ++A   F  +    LV N  TY
Sbjct: 1484 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTY 1543

Query: 383  SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            +++I G C  G  + A   + +M +N + P+ +T   L++GF
Sbjct: 1544 TLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 177/369 (47%), Gaps = 41/369 (11%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            P  VT+ ++I GL     +  A   F ++R  G  PDV TY +L+NG C+  +   AL L
Sbjct: 1223 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 1282

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            F ++            P  +TY  +IDG C+ G +++A+ L  +M ++   PNV TYT +
Sbjct: 1283 FGDLRRAG------LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTIL 1336

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPN-------------------------------- 168
            ++G    +    A+  F EM+ +G+QP+                                
Sbjct: 1337 MKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGI 1396

Query: 169  ---VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
                VT+N+++  LCK G + +A  L   M+ +G++PD  TY  L+   C  G +  A++
Sbjct: 1397 SSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARK 1456

Query: 226  LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            +F +M S G   +  +++++I+ YC+   +  A   + +ML +G++P+ + +N L   L 
Sbjct: 1457 IFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 1516

Query: 286  EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
             + + + A   F EM   G+ A+ +TY   IDG CK G   +A+  +  +       D  
Sbjct: 1517 RMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYL 1576

Query: 346  AYNSLIDGL 354
             + +L+ G 
Sbjct: 1577 THKALLKGF 1585



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 144/316 (45%), Gaps = 30/316 (9%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G +    ++ G + ++   P  +T+  LI G C    + EA  L  ++   GC P+V TY
Sbjct: 1274 GNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTY 1333

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGN------------------GEFGVVCE------- 96
            T L+ G        +A   F+EM +                    G+     E       
Sbjct: 1334 TILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLML 1393

Query: 97   ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                 +TVTY  +I GLCK G +  AKEL ++M    ++P+ +TYT +I   C      E
Sbjct: 1394 EGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 1453

Query: 153  AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
            A+++F  M+  G+ P+ VTF VI+   C+ G +  A      M++ GV P+  TYN L+ 
Sbjct: 1454 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 1513

Query: 213  GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
              C  GR   A   F  M   G     ++Y++LI+G CK    E A+  Y EM   GI P
Sbjct: 1514 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHP 1573

Query: 273  DVVIHNTLFVGLFEIH 288
            D + H  L  G F+ H
Sbjct: 1574 DYLTHKALLKG-FDGH 1588



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 149/295 (50%), Gaps = 5/295 (1%)

Query: 157  FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            F EM   GV P+V   N ++  L    + D+   + + M++ G+ P   TYNTLLD F  
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 217  TGRVNHAKELFVSMESM--GCKHTVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPD 273
             GR +    L   ME+   GC     +Y+++I G  +  ++E A  L   M LSK  K  
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK--KAS 1189

Query: 274  VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
               +N L  GL     V++ + L  EM+  G+     TY   I GL ++G +  A   F 
Sbjct: 1190 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 1249

Query: 334  TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
             +R +    D+  YNSL++G CK+G L+ AL LF  L    L P V+TY+I+I G C  G
Sbjct: 1250 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 1309

Query: 394  QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             +++AR L  +M E   +PNV T+ +L++G + +   +   E   +M    + PD
Sbjct: 1310 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPD 1364



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 166/340 (48%), Gaps = 3/340 (0%)

Query: 124  QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            +M    + P+V     V+R    A  W++   +  EM++ G++P++VT+N ++D   K G
Sbjct: 1074 EMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEG 1133

Query: 184  KMDEASRLLDLMIQH--GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            + D+ + LL  M     G  P+  TYN ++ G    G +  A EL   M  +  K + F+
Sbjct: 1134 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFT 1192

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            Y+ LI G      ++    L  EM ++GI P VV +N +  GL +   VE A   F EM+
Sbjct: 1193 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR 1252

Query: 302  RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              G+  D  TY + ++G CK G + EA+ LF  LR       +  YN LIDG C+ G LE
Sbjct: 1253 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 1312

Query: 362  IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             A  L   +     +PNV TY+I++ G  N   +  AR+ F +M    + P+   ++  I
Sbjct: 1313 EARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI 1372

Query: 422  RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               + + + ++  EL   +    +  D    +I++  L K
Sbjct: 1373 CAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCK 1412



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 8/225 (3%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +G ++  F +   ++    + D VT+  LI GLC    + +A  L  K+   G +PD  T
Sbjct: 1378 LGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCIT 1437

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            YT L++  C       A  +F  M +     G++  P+ VT+T II   C+ G +  A  
Sbjct: 1438 YTCLIHAHCERGLLREARKIFNNMISD----GLL--PSAVTFTVIIHAYCRRGNLYSAYG 1491

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               +M ++ ++PN +TY  +I   C       A   F EM+++G+  N  T+ +++D  C
Sbjct: 1492 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNC 1551

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            K G  ++A R    M Q+G+ PD  T+  LL GF   G V+H  E
Sbjct: 1552 KVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF--DGHVHHTIE 1594



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 75/282 (26%)

Query: 259  LSLYSEMLSKGIKPDV-----------------------------------VIHNTLFVG 283
            LS + EM S G+ PDV                                   V +NTL   
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 284  LFEIHQVERAFKLFDEMQRNGVA--ADTWTYRTFIDGLCKNGYIVEAVELFHTLRI---- 337
              +  + ++   L  EM+  G     +  TY   I GL + G + EA EL   +R+    
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 1188

Query: 338  -----------------LKCEFDIR-------------AYNSLIDGLCKSGRLEIALELF 367
                             +K  +D++              YN++I GL +SG +E A   F
Sbjct: 1189 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248

Query: 368  RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
              +    L+P+V+TY+ ++ G C  G + +A  LF D+    + P V+T+++LI G+ R+
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 1308

Query: 428  NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
             +  +   L  +M E   +P+    +I    L K  +++ SL
Sbjct: 1309 GDLEEARILKEEMGEQGCLPNVCTYTI----LMKGSLNVRSL 1346


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 199/388 (51%), Gaps = 9/388 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    F +++  L    R     +LF +    G  PD+ T + L+N  C  +H  +A ++
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  +            P+ +T  T+I GLC  G + K      Q+  +  + + V+Y ++
Sbjct: 116 FANILKRG------FHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTL 169

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C A +     RL  ++    V+P+VV +N I++ LCKN  + +A  +   MI  G+
Sbjct: 170 INGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGI 229

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK---NKEIEG 257
            PD  TY TL+ GFC+ G++  A  L   M+       V+++S+LI+   K    K ++ 
Sbjct: 230 SPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDE 289

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A+SL+ EM  K + PD+V +N+L  GL + H +ERA  L  EM+ +G+  D ++Y   +D
Sbjct: 290 AMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 349

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLCK G +  A E F  L +  C  ++  YN +I+GLCK+G    A++L   +     +P
Sbjct: 350 GLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMP 409

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           N +T+  +I  L    + DKA  +  +M
Sbjct: 410 NAITFRTIICALSEKDENDKAEKILREM 437



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 201/403 (49%), Gaps = 9/403 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
            A A F  + +    P  F +  +++ L +       ++LF++    NG       P+  
Sbjct: 41  HAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQF-EPNG-----ITPDLC 94

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T + +I+  C +  +  A  +   +  +   P+ +T  ++I+G C+  +  +      ++
Sbjct: 95  TLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQV 154

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + QG Q + V++  +++ LCK G+    +RLL  +  H V+PD   YNT+++  C    +
Sbjct: 155 VAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLL 214

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A +++  M   G    V +Y+ LI+G+C   +++ A SL +EM  K I PDV   + L
Sbjct: 215 GDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVL 274

Query: 281 FVGLFE---IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
              L +      V+ A  LF+EM+   +  D  TY + IDGLCKN ++  A+ L   ++ 
Sbjct: 275 IDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKE 334

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              + D+ +Y  L+DGLCK GRLEIA E F+ L       NV  Y++MI GLC  G   +
Sbjct: 335 HGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGE 394

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           A DL   ME    +PN ITF  +I      +E  K  ++L +M
Sbjct: 395 AMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREM 437



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 188/371 (50%), Gaps = 4/371 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P T  +  I+  L K         L  Q +   I P++ T + +I  FC+      A  +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F  ++ +G  P+ +T N ++  LC  G++ +     D ++  G + D  +Y TL++G C 
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G       L   +E    K  V  Y+ +IN  CKNK +  A  +YSEM+ KGI PDVV 
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG---YIVEAVELFH 333
           + TL  G   + +++ AF L +EM+   +  D +T+   ID L K G    + EA+ LF 
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFE 295

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            ++      DI  YNSLIDGLCK+  LE A+ L + +    + P+V +Y+I++ GLC  G
Sbjct: 296 EMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGG 355

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA-SIV 452
           +++ A++ F  +       NV  ++++I G  +     + ++L  KM+    MP+A +  
Sbjct: 356 RLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFR 415

Query: 453 SIVVDLLAKNE 463
           +I+  L  K+E
Sbjct: 416 TIICALSEKDE 426



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 166/342 (48%), Gaps = 44/342 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
             ++  F V   ILK  F PDA+T  +LIKGLC    I +      ++   G + D  +Y
Sbjct: 107 AHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSY 166

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NGLC+   T     L  ++       G   +P+ V Y TII+ LCK   +  A ++
Sbjct: 167 GTLINGLCKAGETKAVARLLRKLE------GHSVKPDVVMYNTIINSLCKNKLLGDACDV 220

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCY----------------------------------- 146
             +M  K I P+VVTYT++I GFC                                    
Sbjct: 221 YSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGK 280

Query: 147 ---AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
               K  +EA  LF EM  + + P++VT+N ++D LCKN  ++ A  LL  M +HG++PD
Sbjct: 281 EGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPD 340

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
            ++Y  LLDG C  GR+  AKE F  +   GC   V+ Y+++ING CK      A+ L S
Sbjct: 341 VYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKS 400

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           +M  KG  P+ +   T+   L E  + ++A K+  EM   G+
Sbjct: 401 KMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 177/354 (50%), Gaps = 9/354 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TPD  T + LI   C ++ I  A ++F  +   G  PD  T  TL+ GLC        L 
Sbjct: 90  TPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLY 149

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
             +++     +       + V+Y T+I+GLCK G       LL +++  ++KP+VV Y +
Sbjct: 150 FHDQVVAQGFQL------DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNT 203

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C  K   +A  ++ EM+ +G+ P+VVT+  ++   C  GKM EA  LL+ M    
Sbjct: 204 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKN 263

Query: 200 VRPDAFTYNTLLDGFCLTGR---VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + PD +T++ L+D     G+   V+ A  LF  M+       + +Y+ LI+G CKN  +E
Sbjct: 264 INPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 323

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A++L  EM   GI+PDV  +  L  GL +  ++E A + F  +   G   + W Y   I
Sbjct: 324 RAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMI 383

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           +GLCK G   EA++L   +    C  +   + ++I  L +    + A ++ R +
Sbjct: 384 NGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREM 437



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 3/275 (1%)

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            +LM+     P  F +N +L       R      LF   E  G    + + SILIN +C 
Sbjct: 46  FNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 105

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
              I  A S+++ +L +G  PD +  NTL  GL    ++++     D++   G   D  +
Sbjct: 106 QAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVS 165

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I+GLCK G       L   L     + D+  YN++I+ LCK+  L  A +++  + 
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 225

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+VVTY+ +I G C  G+M +A  L  +M+   + P+V TF +LI    +  +  
Sbjct: 226 VKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKK 285

Query: 432 KVIE---LLHKMKEINVMPDASIVSIVVDLLAKNE 463
            V E   L  +MK  N++PD    + ++D L KN 
Sbjct: 286 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNH 320



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 9/203 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESR---IMEAAALFTKLRVFGCEPD 57
           MG++   F +L  +      PD  TF+ LI  L  E +   + EA +LF +++     PD
Sbjct: 246 MGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPD 305

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           + TY +L++GLC+  H   A+ L +EM     E G+  +P+  +YT ++DGLCK G ++ 
Sbjct: 306 IVTYNSLIDGLCKNHHLERAIALLKEMK----EHGI--QPDVYSYTILLDGLCKGGRLEI 359

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           AKE    +  K    NV  Y  +I G C A  + EA  L  +M  +G  PN +TF  I+ 
Sbjct: 360 AKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIIC 419

Query: 178 ELCKNGKMDEASRLLDLMIQHGV 200
            L +  + D+A ++L  MI  G+
Sbjct: 420 ALSEKDENDKAEKILREMIARGL 442



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 115/241 (47%)

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           +HA   F  M  M      F ++ +++   KNK     +SL+ +    GI PD+   + L
Sbjct: 40  HHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSIL 99

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
                    +  AF +F  + + G   D  T  T I GLC  G I + +     +     
Sbjct: 100 INCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGF 159

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D  +Y +LI+GLCK+G  +    L R L    + P+VV Y+ +I  LC +  +  A D
Sbjct: 160 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACD 219

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           ++ +M    + P+V+T+  LI GF  + +  +   LL++MK  N+ PD    S+++D L 
Sbjct: 220 VYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALG 279

Query: 461 K 461
           K
Sbjct: 280 K 280



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 74/179 (41%)

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           + H    A   F+ M        T+ +   +  L KN      + LF          D+ 
Sbjct: 35  QPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLC 94

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
             + LI+  C    + +A  +F ++      P+ +T + +I GLC  G++ K       +
Sbjct: 95  TLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQV 154

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
                  + +++  LI G  +  E   V  LL K++  +V PD  + + +++ L KN++
Sbjct: 155 VAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKL 213


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 242/489 (49%), Gaps = 19/489 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL  +  S     +  F+ LI+         +A   F  +R F C+PD+F +  +++ L 
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLV 174

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R    ++AL ++ +M   N        P+ VTY  +I GLCK      A  L  +M D+ 
Sbjct: 175 RKEAFLLALAVYNQMLKCN------LNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRG 228

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I PN + Y+ V+ G C AK   +A+RLF +M   G   +++T+NV+++  CK+G +D+A 
Sbjct: 229 ILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAF 288

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL L+ + G       Y  L++G     R   A   +  M     K  V  Y+I+I G 
Sbjct: 289 TLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGL 348

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +   +  AL+L  EM  +G++PD + +N L  G  ++  ++ A  L  E+ ++    + 
Sbjct: 349 SQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNN 408

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY   I G+CKNG I +A  +F  +  L C   +  +NSLI+GLCK+ RLE A  LF  
Sbjct: 409 HTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQ 468

Query: 370 L-----PCGVL--------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +     P   L        V ++ +  +M+  LC  G + KA  L + + ++ V+P++ T
Sbjct: 469 MEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRT 528

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
           +++LI GF +    +   +L  +M+    MPD+     ++D L +   + ++L  F    
Sbjct: 529 YNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMV 588

Query: 477 QQEEVDESN 485
           ++  V ES+
Sbjct: 589 KKGCVPESS 597



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 226/448 (50%), Gaps = 23/448 (5%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
              V  ++LK    PD VT+  LI GLC   +  +A  LF ++   G  P+   Y+ +++
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241

Query: 67  GLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL-LQ 124
           GLC+      A  LF +M A+G       C  + +TY  +++G CK G++D A  LL L 
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASG-------CNRDLITYNVLLNGFCKSGYLDDAFTLLQLL 294

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
            KD +I   V+ Y  +I G   A+ + EA   + +M+ + ++P+V+ + +++  L + G+
Sbjct: 295 TKDGHI-LGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGR 353

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           + EA  LL  M + G+RPD   YN L+ GFC  G ++ A+ L + +    C     +YSI
Sbjct: 354 VTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSI 413

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM---- 300
           LI G CKN  I  A  ++ EM   G  P VV  N+L  GL + +++E A  LF +M    
Sbjct: 414 LICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR 473

Query: 301 ---------QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
                    Q      D  + +  ++ LC++G I++A +L   L       DIR YN LI
Sbjct: 474 KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILI 533

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           +G CK G +  A +LF+ +     +P+ VTY  +I GL   G+ + A ++F  M +   V
Sbjct: 534 NGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCV 593

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHK 439
           P   T+  ++    R N  S  + +  K
Sbjct: 594 PESSTYKTIMTWSCRENNISLALSVWMK 621



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 207/450 (46%), Gaps = 55/450 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  + K       + +  LI GL    R  EA   + K+     +PDV  Y
Sbjct: 282 GYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLY 341

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T ++ GL +      AL L  EM     E G+   P+T+ Y  +I G C  G++D+A+ L
Sbjct: 342 TIMIRGLSQEGRVTEALTLLGEMT----ERGL--RPDTICYNALIKGFCDMGYLDEAESL 395

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L++   +  PN  TY+ +I G C     N+A+ +F EM   G  P+VVTFN +++ LCK
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCK 455

Query: 182 NGKMDEASRLLDLMIQHGVRPDAF--------------TYNTLLDGFCLTGRVNHAKELF 227
             +++EA RLL   ++   +P  F              +   +++  C +G +  A +L 
Sbjct: 456 ANRLEEA-RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLL 514

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
           + +   G    + +Y+ILING+CK   I GA  L+ EM  KG  PD V + TL  GL+  
Sbjct: 515 MQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRA 574

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL------------ 335
            + E A ++F++M + G   ++ TY+T +   C+   I  A+ ++               
Sbjct: 575 GRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKV 634

Query: 336 -----------------RILKCE-----FDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
                            R+L+ +     FD+  Y   + GL ++ R   A  +F  L   
Sbjct: 635 RVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDF 694

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
            +  +  +  ++IG LC    +D A D+FL
Sbjct: 695 KMNISSASCVMLIGRLCMVENLDMAMDVFL 724



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 167/372 (44%), Gaps = 35/372 (9%)

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           II  L KE   +   ++L ++K+  IK +   ++ +I  +  A    +A   F  M D  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
            +P++  FN+I+  L +      A  + + M++  + PD  TY  L+ G C T +   A 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF--- 281
            LF  M   G       YSI+++G C+ K+I  A  L+S+M + G   D++ +N L    
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGF 278

Query: 282 --------------------------------VGLFEIHQVERAFKLFDEMQRNGVAADT 309
                                            GLF   + E A   + +M R  +  D 
Sbjct: 279 CKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDV 338

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   I GL + G + EA+ L   +       D   YN+LI G C  G L+ A  L   
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLE 398

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +      PN  TYSI+I G+C +G ++KA+ +F +ME+   +P+V+TF+ LI G  + N 
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458

Query: 430 PSKVIELLHKMK 441
             +   L ++M+
Sbjct: 459 LEEARLLFYQME 470



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 143/295 (48%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           RLFI  +           ++I+ +L K    +   ++L  +    ++  +  ++ L++ +
Sbjct: 79  RLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAY 138

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
              G    A E F  M    CK  +F+++++++   + +    AL++Y++ML   + PDV
Sbjct: 139 SEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDV 198

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +  L  GL +  + + A  LFDEM   G+  +   Y   + GLC+   I +A  LF  
Sbjct: 199 VTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSK 258

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +R   C  D+  YN L++G CKSG L+ A  L + L     +  V+ Y  +I GL    +
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
            ++A   +  M    + P+V+ + ++IRG  +    ++ + LL +M E  + PD 
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDT 373


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 246/473 (52%), Gaps = 12/473 (2%)

Query: 2   GRVSHGFVVLGRILK-SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G    G  +  R++K SC  P+ VT+  +I GLC   R  E+  ++ +++   CE D+FT
Sbjct: 233 GDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFT 292

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y++L+ GLC   +   A+ +++EM   +         + VTY  +++G C+ G + ++ E
Sbjct: 293 YSSLICGLCDVGNVDGAVEVYKEMVKRSVVV------DVVTYNALLNGFCRAGKIKESFE 346

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L + M  +N   NVV+Y   IRG    +   EA  ++  +  +G   +  T+ V++  LC
Sbjct: 347 LWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLC 405

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG +++A ++L      G + DAF Y++++DG    GRV+ A  +   M+  GC+ +  
Sbjct: 406 KNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPH 465

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
             + LING+ +  ++E A+  + EM +KG  P VV +NTL  GL +  +   A+    EM
Sbjct: 466 VCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEM 525

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                  D  TY   +DGLC+   I  A+ L+  + +   E D+  +N L+ GLC +G++
Sbjct: 526 LEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKI 585

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E AL L+ ++     +PN+VT++ ++ GL    + + A  ++  M +N   P++I++++ 
Sbjct: 586 EDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNIT 645

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           ++G       S  I L     +  ++P     SI   +L +  + L  L S +
Sbjct: 646 LKGLCSCGRISDGIALFDDALKNGILP----TSITWYILVRAVLKLGPLDSLS 694



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 129/526 (24%), Positives = 235/526 (44%), Gaps = 90/526 (17%)

Query: 37  SRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE 96
           +RI+E      K +   C  DV    T++    ++     AL+ F++M    G     C+
Sbjct: 63  TRIVE----LIKTQKCKCTEDVVL--TVLKAYAKSKMPNEALDCFQKMEEIFG-----CK 111

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P   +Y  +++   +   ++KA+  L   +   I PN+ TY  +I+     + + EAK L
Sbjct: 112 PGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGL 171

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF-- 214
              M  + ++P+V ++  +++ + K+G +  A  + D M + G+ PD   YN ++DGF  
Sbjct: 172 LDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFK 231

Query: 215 ----------------------------------CLTGRVNHAKELFVSMESMGCKHTVF 240
                                             C  GR + + E++  M+   C+  +F
Sbjct: 232 RGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLF 291

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKG--------------------IKP-------- 272
           +YS LI G C    ++GA+ +Y EM+ +                     IK         
Sbjct: 292 TYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMM 351

Query: 273 ------DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
                 +VV +N    GLFE  +VE A  +++ ++R G  AD+ TY   I GLCKNG++ 
Sbjct: 352 GKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLN 411

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP---CGVLVPNVVTYS 383
           +A+++    +    + D  AY+S++DGL K GR++ AL +   +    C  L P+V   +
Sbjct: 412 KALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCE-LSPHVC--N 468

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I G     ++++A   F +ME     P V++++ LI G  +    S     + +M E 
Sbjct: 469 PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEK 528

Query: 444 NVMPDASIVSIVVDLLAKN---EISLNSLPSFTVHEQQEEVDESNV 486
           +  PD    S+++D L +    +++LN      V   + +V   N+
Sbjct: 529 DWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNI 574



 Score = 38.5 bits (88), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 38/198 (19%), Positives = 82/198 (41%), Gaps = 12/198 (6%)

Query: 284 LFEIHQVER----AFKLFDEMQRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           LF++ + E+    A  LFD   R  G       +   +  L     +V    +   ++  
Sbjct: 13  LFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQ 72

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVLVPNVVTYSIMIGGLCNDGQ 394
           KC+       +++    KS     AL+ F+ +     C    P + +Y+ ++        
Sbjct: 73  KCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCK---PGIRSYNALLNAFIEANL 129

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           ++KA       E   ++PN+ T+++LI+  ++  +  +   LL  M   ++ PD      
Sbjct: 130 LEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGT 189

Query: 455 VVDLLAKNEISLNSLPSF 472
           V++ + K+   +++L  F
Sbjct: 190 VINGMVKSGDLVSALEVF 207


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 218/443 (49%), Gaps = 9/443 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L R+ K    P   T+ +L+        I +A  +   +   G EPD++TY
Sbjct: 253 GMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTY 312

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L  GLC+      A  L +EM       G +  P+ VTY T+ D   K      A  L
Sbjct: 313 NVLAAGLCQAGKVDEAFRLKDEME----RLGTLL-PDVVTYNTLADACFKCRCSSDALRL 367

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M++K +K  +VT+  VI+G C   +   A     +M D G+ P+V+T+N ++   CK
Sbjct: 368 LEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCK 427

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A  L+D M++ G++ D FT NT+L   C   R   A+ L  S    G      S
Sbjct: 428 AGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVS 487

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  ++  Y K    E AL L+ EM+ K + P +  +NTL  GL  + +++ A    +E+ 
Sbjct: 488 YGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELM 547

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGR 359
             G+  D  TY   I   CK G +  A + FH  ++++  F  D+   N+L++GLC +G+
Sbjct: 548 EKGLVPDDTTYNIIIHAYCKEGDLENAFQ-FHN-KMVENSFKPDVVTCNTLMNGLCLNGK 605

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ AL+LF S        +V+TY+ +I  +C DG +D A   F DME   + P+  T+++
Sbjct: 606 LDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNV 665

Query: 420 LIRGFIRINEPSKVIELLHKMKE 442
           ++          +   +LHK+ E
Sbjct: 666 VLSALSEAGRTEEAQNMLHKLAE 688



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 224/462 (48%), Gaps = 9/462 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++     L  +     +PDAVT+ +L+   C +  + EA AL  +++  G  P   TY
Sbjct: 218 GTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTY 277

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            TLV+   R      A  + E M ANG        EP+  TY  +  GLC+ G VD+A  
Sbjct: 278 NTLVSAYARLGWIKQATKVVEAMTANG-------FEPDLWTYNVLAAGLCQAGKVDEAFR 330

Query: 121 LLLQMKD-KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L  +M+    + P+VVTY ++       +  ++A RL  EM ++GV+  +VT N+++  L
Sbjct: 331 LKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGL 390

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK+G+++ A   L+ M   G+ PD  TYNTL+   C  G +  A  L   M   G K   
Sbjct: 391 CKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDT 450

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           F+ + ++   CK K  E A  L      +G  PD V + T+    F+ +  E A +L+DE
Sbjct: 451 FTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDE 510

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M    +     TY T I GL + G + EA++  + L       D   YN +I   CK G 
Sbjct: 511 MIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGD 570

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LE A +    +      P+VVT + ++ GLC +G++DKA  LF    E     +VIT++ 
Sbjct: 571 LENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNT 630

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           LI+   +  +    +     M+   + PDA   ++V+  L++
Sbjct: 631 LIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 672



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 192/397 (48%), Gaps = 24/397 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +      L ++      PD +T+ +LI   C    I +A  L  ++   G + D FT 
Sbjct: 394 GELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTL 453

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++  LC+      A  L +       + G +  P+ V+Y T++    KE   + A  L
Sbjct: 454 NTVLYNLCKEKRYEEAQGLLQSPP----QRGFM--PDEVSYGTVMAAYFKEYNSEPALRL 507

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +K + P++ TY ++I+G        EA     E+M++G+ P+  T+N+I+   CK
Sbjct: 508 WDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCK 567

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++ A +  + M+++  +PD  T NTL++G CL G+++ A +LF S    G K  V +
Sbjct: 568 EGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVIT 627

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI   CK+ +++ AL  +++M ++G++PD   +N +   L E  + E A  +  ++ 
Sbjct: 628 YNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLA 687

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI---------RAYNSLID 352
            +G  +     ++F   L K   + EA     + +  K E +           AY  L++
Sbjct: 688 ESGTLS-----QSFSSPLLKPSSVDEA----ESGKDAKTEEETVENPQDSASEAYTKLVN 738

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           GLC SG+ + A  +   +    +  +  TY  ++ GL
Sbjct: 739 GLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 4/335 (1%)

Query: 118 AKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRL--FIEMMDQGVQPNVVTFNV 174
           A +LL  ++ +  ++P++    +V+     +   +    L  F  ++   + PN  TFN+
Sbjct: 150 AAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNL 209

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++   C  G + +A   L  M   G+ PDA TYNTLL+  C  G +  A+ L   M+  G
Sbjct: 210 LVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDG 269

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
              T  +Y+ L++ Y +   I+ A  +   M + G +PD+  +N L  GL +  +V+ AF
Sbjct: 270 VAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAF 329

Query: 295 KLFDEMQRNG-VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
           +L DEM+R G +  D  TY T  D   K     +A+ L   +R    +  +  +N +I G
Sbjct: 330 RLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKG 389

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCK G LE AL     +    L P+V+TY+ +I   C  G + KA  L  +M    +  +
Sbjct: 390 LCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLD 449

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             T + ++    +     +   LL    +   MPD
Sbjct: 450 TFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPD 484



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 164/355 (46%), Gaps = 41/355 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++  + ++  +++     D  T  +++  LC E R  EA  L       G  PD  +Y
Sbjct: 429 GNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSY 488

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++    +  ++  AL L++EM            P+  TY T+I GL + G + +A + 
Sbjct: 489 GTVMAAYFKEYNSEPALRLWDEMIEKK------LTPSISTYNTLIKGLSRMGRLKEAIDK 542

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L ++ +K + P+  TY  +I  +C   D   A +   +M++   +P+VVT N +M+ LC 
Sbjct: 543 LNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCL 602

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NGK+D+A +L +  ++ G + D  TYNTL+   C  G V+ A   F  ME+ G +   F+
Sbjct: 603 NGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFT 662

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKG----------IKPDVV---------------- 275
           Y+++++   +    E A ++  ++   G          +KP  V                
Sbjct: 663 YNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETV 722

Query: 276 ---------IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
                     +  L  GL    Q + A  + DEM + G++ D+ TY T ++GL K
Sbjct: 723 ENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 110/259 (42%), Gaps = 42/259 (16%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+      L  +++    PD  T+  +I   C E  +  A     K+     +PDV T
Sbjct: 533 MGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVT 592

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             TL+NGLC       AL LFE       +  V      +TY T+I  +CK+G VD A  
Sbjct: 593 CNTLMNGLCLNGKLDKALKLFESWVEKGKKVDV------ITYNTLIQTMCKDGDVDTALH 646

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG----------VQPNVV 170
               M+ + ++P+  TY  V+     A    EA+ +  ++ + G          ++P+ V
Sbjct: 647 FFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSV 706

Query: 171 -------------------------TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                                     +  +++ LC +G+  EA  +LD M+Q G+  D+ 
Sbjct: 707 DEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSS 766

Query: 206 TYNTLLDGFC-LTGRVNHA 223
           TY TL++G      R+ HA
Sbjct: 767 TYITLMEGLVKRQKRLTHA 785


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 230/454 (50%), Gaps = 7/454 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G     + +  ++++    P    F  +IKGL  + R  +A  L  KL V    PDVFTY
Sbjct: 340 GMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL-KLVVDTGVPDVFTY 398

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ LC+      A+NL+++M     E GV  +P+ VTY +++ G C++G +D+A +L
Sbjct: 399 GCLIHWLCKHQKLHEAVNLWDKMK----EAGV--KPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M DK   PN VTYT++++G+   K ++ A  L  EM   GV     T+N++++ L  
Sbjct: 453 YSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYM 512

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++ E   +L   +  G  P   TYN++++GF   G +  A  ++  M   G    + +
Sbjct: 513 VNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVT 572

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  I+GYC+    + A+ L   +   GI+PD+  +N       +   + RA      + 
Sbjct: 573 YTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLL 632

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++G+  D   Y +F+ G      + EA + ++++   +   D   Y +LIDG  K G + 
Sbjct: 633 KDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVA 692

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALEL+  +    ++P+  T++ +  GLC  G +D A+ L  DM    V PN++T++MLI
Sbjct: 693 FALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLI 752

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
              +R  +  +  +L  +M    V+PD +   I+
Sbjct: 753 NACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 197/402 (49%), Gaps = 6/402 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+  LI  LC   ++ EA  L+ K++  G +P + TY +L+ G C       AL L
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + EM +          PN VTYTT++ G  K+   D A  LL +M+   +     TY  +
Sbjct: 453 YSEMPDKG------FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNIL 506

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G        E   +    + +G  P  +T+N I++   K G M  A  +   M + G+
Sbjct: 507 INGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TY + +DG+C T   + A +L + +   G +  + +Y+  I+ +CK   +  AL 
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
               +L  G+ PDV ++N+   G   +  +  A K +  M +  V ADT  Y T IDG  
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G +  A+EL+  +       D + + +L  GLC+SG ++ A  L   +    + PN+V
Sbjct: 687 KVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV 746

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           TY+++I     DG++ +A  L  +M  + VVP+  T+D+L R
Sbjct: 747 TYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 227/453 (50%), Gaps = 8/453 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFTYTTLVNGL 68
           VLG++ ++ F P  +T++S++  L    R+ EA  L  + L   G + DV   T L++G 
Sbjct: 242 VLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGY 301

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C       AL+LF+E+ +     GV   P  VTY  +I G   EG  D+  +L  QM ++
Sbjct: 302 CLNGEVGKALDLFDEVVSD----GVT--PTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQ 355

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            + P+   +  VI+G    K W +A  L   ++D GV P+V T+  ++  LCK+ K+ EA
Sbjct: 356 GLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEA 414

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L D M + GV+P   TY++LL G+C  GR++ A +L+  M   G      +Y+ L+ G
Sbjct: 415 VNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKG 474

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           Y K K  + A +L +EM   G+      +N L  GL+ +++V    ++       G    
Sbjct: 475 YIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPT 534

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T TY + I+G  K G +  A  ++  +R      +I  Y S IDG C++   ++A++L  
Sbjct: 535 TMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLI 594

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    + P++  Y+  I   C  G M +A    + + ++ + P+V  ++  + G+  + 
Sbjct: 595 YVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLK 654

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             ++  +  + M +  V+ D  I + ++D  +K
Sbjct: 655 MMAEASKFYYSMIKQRVVADTEIYTTLIDGFSK 687



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 219/511 (42%), Gaps = 80/511 (15%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R++     PDA + T L+      +   +A  LF ++R  GC  D   Y  ++    R  
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ LF+EMA      G   +P+   Y   I GLCK    D+A ++L +M++   +P
Sbjct: 200 MHCDAVRLFDEMA------GAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEP 253

Query: 133 NVVTYTSVI------------------------------------RGFCYAKDWNEAKRL 156
             +TY+SV+                                     G+C   +  +A  L
Sbjct: 254 WELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDL 313

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR--------------- 201
           F E++  GV P  VT+ V++      G  DE  +L   MI+ G+                
Sbjct: 314 FDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLR 373

Query: 202 -------------------PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
                              PD FTY  L+   C   +++ A  L+  M+  G K ++ +Y
Sbjct: 374 DKRWKDAIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTY 433

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
             L+ GYC+   ++ AL LYSEM  KG  P+ V + TL  G  +    + A+ L +EM++
Sbjct: 434 HSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQ 493

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRL 360
           NGV+   +TY   I+GL     + E  E+    R L   F      YNS+I+G  K+G +
Sbjct: 494 NGVSCGDYTYNILINGLYMVNRVCEVDEMLK--RFLSEGFVPTTMTYNSIINGFVKAGMM 551

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A  ++R +    + PN+VTY+  I G C     D A  L + +  + + P++  ++  
Sbjct: 552 GSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAF 611

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           I  F +    S+ +  L  + +  + PD ++
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTV 642



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 189/403 (46%), Gaps = 8/403 (1%)

Query: 46  FTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
           ++++   G  PD  + T L+      +    AL LF+EM  G G     C  +   Y  +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEM-RGKG-----CYADAKMYDVV 191

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I    + G    A  L  +M    +KP+   Y   I G C  +D + A ++  +M + G 
Sbjct: 192 IRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGF 251

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLD-LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           +P  +T++ ++D L K  +MDEA RL D +++  G + D      L+ G+CL G V  A 
Sbjct: 252 EPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKAL 311

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +LF  + S G   T  +Y +LI G       +    L  +M+ +G+ P     N +  GL
Sbjct: 312 DLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGL 371

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               + + A  L   +   GV  D +TY   I  LCK+  + EAV L+  ++    +  I
Sbjct: 372 LRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSI 430

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y+SL+ G C+ GR++ AL+L+  +P     PN VTY+ ++ G       D A  L  +
Sbjct: 431 VTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNE 490

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           M +N V     T+++LI G   +N   +V E+L +      +P
Sbjct: 491 MRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVP 533



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 2/270 (0%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+  GV PDA +   LL    L      A  LF  M   GC      Y ++I    +   
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
              A+ L+ EM   G+KPD  ++     GL ++   +RA ++  +M+  G      TY +
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKC-EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
            +D L K   + EA+ L   + +    + D+     L+ G C +G +  AL+LF  +   
Sbjct: 261 VVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSD 320

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + P  VTY ++I G   +G  D+   L   M E  ++P+   F+++I+G +R       
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDA 380

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           I LL  + +  V PD      ++  L K++
Sbjct: 381 IGLLKLVVDTGV-PDVFTYGCLIHWLCKHQ 409



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 4/298 (1%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           +  M+ +GV P+  +   ++          +A  L D M   G   DA  Y+ ++     
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G    A  LF  M   G K     Y+I I+G CK ++ + AL +  +M   G +P  + 
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 277 HNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           ++++   L ++ +++ A +L D+M    G   D       + G C NG + +A++LF  +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                      Y  LI G    G  +   +L R +    L+P+   ++++I GL  D + 
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
             A  L L +  +  VP+V T+  LI    +  +  + + L  KMKE  V P  SIV+
Sbjct: 378 KDAIGL-LKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKP--SIVT 432


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 223/432 (51%), Gaps = 24/432 (5%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+ D  +F  L+  LC     + +A L  ++R +G  P       +++ L        A+
Sbjct: 203 FSSDPASFDLLL--LC-----LPSAPLLRRVRQYGISPSPEACNAVLSRLPLDE----AI 251

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF+ + + N     VC     +Y  ++  LC  G V+ A++L  +M      P+VVTY 
Sbjct: 252 ELFQGLPDKN-----VC-----SYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYG 298

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G+C   +   A +L  +M+ +GV+PN   +  ++  LC  G++ +A  +++ M+ H
Sbjct: 299 ILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHH 358

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            V  D   Y T+L GFC  G +  A+  F  M+  G      +Y+ LING C+  E++ A
Sbjct: 359 KVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEA 418

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             +  EML++ +  D V +  L  G  +  ++  AF++ + M + GVA +  TY    DG
Sbjct: 419 EKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDG 478

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G +  A EL H +     E +   YNSLI+GLCK+G L+ A+     +    L P+
Sbjct: 479 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPD 538

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V TY+ +I  LC  G++D+A DL  +M +N + P ++T+++L+ GF          +LL 
Sbjct: 539 VYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598

Query: 439 KMKEINVMPDAS 450
            M E N+ P+A+
Sbjct: 599 WMLEKNIHPNAT 610



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 218/441 (49%), Gaps = 12/441 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+  LI G CA   +  A  L   +   G EP+   YT++V  LC       AL +
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTV 351

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E+M +      V+ +     YTT++ G C +G +  A+    +M+ K +  + VTYT++
Sbjct: 352 VEDMVH----HKVILD--EAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTL 405

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C A +  EA+++  EM+ + +  + VT+ V++D  CK GKM EA ++ + M+Q GV
Sbjct: 406 INGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGV 465

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TY  L DG C  G V  A EL   M + G +    +Y+ LING CK   ++ A+ 
Sbjct: 466 APNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMR 525

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
             ++M + G+KPDV  + TL   L +  +++RA  L  EM  NG+     TY   ++G C
Sbjct: 526 TMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFC 585

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            +G +    +L   +       +   YNSL+   C    ++   E+++ +    + PN  
Sbjct: 586 MSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNEN 645

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE---LL 437
           TY+I+I G C    M +A+    +M E        ++  LIR    +N+  K +E   L 
Sbjct: 646 TYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIR---LLNKKKKFVEARKLF 702

Query: 438 HKMKEINVMPDASIVSIVVDL 458
           H M++     +  + +  +D 
Sbjct: 703 HDMRKEGFTAEPDVYNFYIDF 723



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 188/394 (47%), Gaps = 29/394 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRVS    V+  ++      D   +T+++ G C +  ++ A   F +++  G   D  TY
Sbjct: 343 GRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTY 402

Query: 62  TTLVNGLCRTSHTIVALNLFEEM---------------ANGNGEFGVVCE---------- 96
           TTL+NGLCR      A  + +EM                +G  + G + E          
Sbjct: 403 TTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQ 462

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN VTYT + DGLCK+G V  A ELL +M +K ++ N  TY S+I G C A   ++
Sbjct: 463 RGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQ 522

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A R   +M   G++P+V T+  ++D LCK+G++D A  LL  M+ +G++P   TYN L++
Sbjct: 523 AMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMN 582

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           GFC++GRV   K+L   M          +Y+ L+  YC    ++    +Y  M S+ ++P
Sbjct: 583 GFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEP 642

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +   +N L  G  +   ++ A    +EM   G      +Y   I  L K    VEA +LF
Sbjct: 643 NENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLF 702

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           H +R      +   YN  ID       LE  L L
Sbjct: 703 HDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLAL 736



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 207/419 (49%), Gaps = 8/419 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G + +   +L  ++     P+A  +TS++  LC + R+ +A  +   +       D   
Sbjct: 307 LGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAV 366

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT+++G C     + A   F+EM       G+  +   VTYTT+I+GLC+ G + +A++
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRK----GLATD--GVTYTTLINGLCRAGELKEAEK 420

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L +M  + +  + VTYT ++ G+C      EA ++   M+ +GV PNVVT+  + D LC
Sbjct: 421 VLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLC 480

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +  A+ LL  M   G+  +A TYN+L++G C  G ++ A      M++ G K  V+
Sbjct: 481 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVY 540

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+  CK+ E++ A  L  EML  GIKP +V +N L  G     +VE   KL + M
Sbjct: 541 TYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWM 600

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +  +  TY + +   C    +    E++  +     E +   YN LI G CK+  +
Sbjct: 601 LEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSM 660

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV--PNVITF 417
           + A      +          +YS +I  L    +  +AR LF DM +      P+V  F
Sbjct: 661 KEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 151/334 (45%), Gaps = 46/334 (13%)

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G+ P+    N ++  L     +DEA  L   +    V     +YN LL   C  GRV  A
Sbjct: 230 GISPSPEACNAVLSRL----PLDEAIELFQGLPDKNV----CSYNILLKVLCGAGRVEDA 281

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP----------- 272
           ++LF   + M     V +Y ILI+GYC   E+E A+ L  +M+++G++P           
Sbjct: 282 RQLF---DEMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVAL 338

Query: 273 ------------------------DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
                                   D  ++ T+  G      +  A + FDEMQR G+A D
Sbjct: 339 LCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 398

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY T I+GLC+ G + EA ++   +   + + D   Y  L+DG CK G++  A ++  
Sbjct: 399 GVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHN 458

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           ++    + PNVVTY+ +  GLC  G +  A +L  +M    +  N  T++ LI G  +  
Sbjct: 459 TMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG 518

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
              + +  +  M    + PD    + ++D L K+
Sbjct: 519 YLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 233/474 (49%), Gaps = 49/474 (10%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+T +IK LC +        +F +++  G + D + Y T + GLC+ + + +   + ++ 
Sbjct: 227 TYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDY 286

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
              N         +   YT +I G C E  +D+A+ + L+M+ + + P+V  Y +++ G+
Sbjct: 287 RTRNAHV------HKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGY 340

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C ++++++A  ++  M+ +G++ N V F+ I+  L + G+  E   + +   + G+  D 
Sbjct: 341 CNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDR 400

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY-CKNKEIEGALSLYS 263
             YN L D  C  G+V+ A  +   ++SM     +  Y+ LINGY  + K IE A SL+ 
Sbjct: 401 KAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIE-AQSLFK 459

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM  +G KPDVV +N L  G F       A  L + M+  GV  ++ T++  I+GLC  G
Sbjct: 460 EMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAG 519

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL----------------- 366
            + EA E F+ L+    E  +  Y +L++G C++  +E + EL                 
Sbjct: 520 KVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKP 579

Query: 367 --------FRSLPCG----------------VLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
                   F +L C                    P+ VTY+IMI G C    + +A +LF
Sbjct: 580 SKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELF 639

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            DM+E  + P+ +T+ ++I G+ ++N   +  EL   MKE  + PD    ++++
Sbjct: 640 KDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVII 693



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 212/446 (47%), Gaps = 35/446 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            R   G+ VL              +T++I+G C E+++ EA ++F ++   G  PDV+ Y
Sbjct: 274 NRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVY 333

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGN---------------GEFGVVCEP--------- 97
             LV+G C + +   AL +++ M +                  E G   E          
Sbjct: 334 CALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKE 393

Query: 98  -----NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                +   Y  + D LCK G VD A  +L ++K   +  ++  YT++I G+       E
Sbjct: 394 SGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIE 453

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+ LF EM ++G +P+VV +NV+     +N    EA  LL+ M   GV P++ T+  +++
Sbjct: 454 AQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIE 513

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC------KNKEIEGALSLYSEML 266
           G C  G+V  A+E F  ++    + +V  Y+ L+NGYC      K+ E++ A  L   ML
Sbjct: 514 GLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTML 573

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
              +KP  V+++ +F  L     +E A  LF+     G   D  TY   I+G CK   + 
Sbjct: 574 EMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLP 633

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA ELF  ++      D   Y  +I+G CK   L  A ELF+ +    + P+V+ Y+++I
Sbjct: 634 EAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVII 693

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVP 412
            GL N G  + A  L+ +M +  + P
Sbjct: 694 KGLLNSGHTEIAFQLYNEMIDMGMTP 719



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 164/306 (53%), Gaps = 12/306 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L  +       D   +T+LI G   + + +EA +LF ++   G +PDV  
Sbjct: 413 LGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVA 472

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L  G  R      A++L   M +     GV  EPN+ T+  II+GLC  G V++A+E
Sbjct: 473 YNVLAAGFFRNRTDFEAMDLLNYMESQ----GV--EPNSTTHKIIIEGLCSAGKVEEAEE 526

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYA---KDWNEAKRLFI---EMMDQGVQPNVVTFNV 174
               +K ++++ +V  YT+++ G+C A   +  +E K  FI    M++  ++P+ V ++ 
Sbjct: 527 FFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSK 586

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           I   LC NG M+ A  L +L I  G  PDA TY  +++G+C T  +  A ELF  M+  G
Sbjct: 587 IFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERG 646

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                 +Y+I+INGYCK   +  A  L+ +M  +GIKPDV+ +  +  GL      E AF
Sbjct: 647 ITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAF 706

Query: 295 KLFDEM 300
           +L++EM
Sbjct: 707 QLYNEM 712



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 209/458 (45%), Gaps = 19/458 (4%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL-------VNGLCRT 71
           F+ +  T+TS+I+ LC  +   +  +LF  +     +   F    L       VN +   
Sbjct: 91  FSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLFDSLFEGVNDVNED 150

Query: 72  SHTIVALNLFEEMANGNGEF------------GVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            +   A N F +       F             VV  PN +++  +I+ L K   VD A 
Sbjct: 151 HYLFNAFNGFVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMAL 210

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            L ++ K   +  N  TYT VI+  C   DW    R+F EM + GV  +   +   ++ L
Sbjct: 211 CLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGL 270

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CKN + D    +L            + Y  ++ GFC   +++ A+ +F+ ME  G    V
Sbjct: 271 CKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDV 330

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           + Y  L++GYC ++  + AL++Y  M+S+GIK + VI + +   L E+ +      +F+E
Sbjct: 331 YVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEE 390

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            + +G+  D   Y    D LCK G + +AV +   L+ ++ + D++ Y +LI+G    G+
Sbjct: 391 FKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGK 450

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
              A  LF+ +      P+VV Y+++  G   +    +A DL   ME   V PN  T  +
Sbjct: 451 PIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKI 510

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +I G     +  +  E  + +K  +V     I + +V+
Sbjct: 511 IIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVN 548



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 49/92 (53%)

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
           V++PN+++++ +I  L    ++D A  LF+  +   ++ N  T+ ++I+   +  +   V
Sbjct: 185 VILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENV 244

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           + +  +MKE  V  D+   +  ++ L KN  S
Sbjct: 245 VRVFDEMKEAGVDDDSYCYATFIEGLCKNNRS 276


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 216/448 (48%), Gaps = 12/448 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGRV      L  +++  F  D  T T +I   C +  +      F K+   G  P+V  
Sbjct: 237 MGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVIN 296

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T L+NGLC+      A  L EEM     +      PN  T+TT+IDGLCK+G+ +KA  
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWK------PNVYTHTTLIDGLCKKGWTEKAFR 350

Query: 121 LLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L L++ +    KPNV TYT++I G+C     N A+ L   M +QG+ PN  T+  ++D  
Sbjct: 351 LFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGH 410

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G    A  L+DLM + G  P+ +TYN ++DG C  G ++ A  L   +   G +   
Sbjct: 411 CKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADG 470

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+IL++ +C+  +   +L  +++ML  G  PD+  + TL        Q++ + +LF+E
Sbjct: 471 VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEE 530

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
               G+     TY + I G C+ G    AV+LF  +    C  D   Y +LI GLCK  +
Sbjct: 531 AVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESK 590

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A  L+ ++    L P  VT   +    C       A ++   +E+   +  V T   
Sbjct: 591 LDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNT--- 647

Query: 420 LIRGFIRINEPSKVIELLHKM--KEINV 445
           L+R      +        HK+  KE NV
Sbjct: 648 LVRKLCSEGKLDMAALFFHKLLDKEPNV 675



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 192/387 (49%), Gaps = 7/387 (1%)

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           +A N+F EM     + GV   P+ V++  ++   C  G V +A++ L  M ++    +  
Sbjct: 207 IAENMFVEMC----QRGV--SPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNA 260

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T T +I  FC     N     F +M++ G+ PNV+ F  +++ LCK G + +A  LL+ M
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKE 254
           ++ G +P+ +T+ TL+DG C  G    A  LF+ +  S G K  V +Y+ +INGYCK  +
Sbjct: 321 VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDK 380

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  A  L S M  +G+ P+   + TL  G  ++    RA++L D M + G + + +TY  
Sbjct: 381 LNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNA 440

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            IDGLCK G + EA  L + + +   + D   Y  L+   C+      +L  F  +    
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             P++ +Y+ +I   C   QM ++  LF +     ++P   T+  +I G+ R    S  +
Sbjct: 501 FTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAV 560

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
           +L  +M      PD+     ++  L K
Sbjct: 561 KLFQRMSNHGCAPDSITYGALISGLCK 587



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 198/409 (48%), Gaps = 11/409 (2%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A  +F ++   G  PD  ++  +V   C     + A    E+  N   E G + +    T
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA----EKWLNAMVERGFIVD--NAT 261

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
            T IID  C++G+V++      +M +  + PNV+ +T++I G C      +A  L  EM+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +G +PNV T   ++D LCK G  ++A RL L L+   G +P+  TY  +++G+C   ++
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A+ L   M+  G      +Y+ LI+G+CK      A  L   M  +G  P++  +N +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +   ++ A++L +++  +G+ AD  TY   +   C+      ++  F+  ++LK 
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFN--KMLKV 499

Query: 341 EF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            F  DI +Y +LI   C+  +++ +  LF       L+P   TY+ MI G C  G    A
Sbjct: 500 GFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLA 559

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
             LF  M  +   P+ IT+  LI G  + ++      L   M +  + P
Sbjct: 560 VKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 157/312 (50%), Gaps = 1/312 (0%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+ +F+EM  +GV P+ V+F +++   C  G++ EA + L+ M++ G   D  T   ++D
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIID 267

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
            FC  G VN     F  M  MG    V +++ LING CK   I+ A  L  EM+ +G KP
Sbjct: 268 AFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKP 327

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQR-NGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           +V  H TL  GL +    E+AF+LF ++ R +G   +  TY   I+G CK   +  A  L
Sbjct: 328 NVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEML 387

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
              ++      +   Y +LIDG CK G    A EL   +      PN+ TY+ +I GLC 
Sbjct: 388 LSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCK 447

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G +D+A  L   +  + +  + +T+ +L+    R  + ++ +   +KM ++   PD   
Sbjct: 448 KGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHS 507

Query: 452 VSIVVDLLAKNE 463
            + ++    + +
Sbjct: 508 YTTLISXFCRQK 519



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 167/347 (48%), Gaps = 1/347 (0%)

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +KN++        ++  F       EA  + +EM +QG+  +  T N ++D     G ++
Sbjct: 147 NKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVE 206

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  +   M Q GV PD  ++  ++   C  GRV  A++   +M   G      + +++I
Sbjct: 207 IAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLII 266

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           + +C+   +   +  + +M+  G+ P+V+    L  GL +   +++AF+L +EM R G  
Sbjct: 267 DAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK 326

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
            + +T+ T IDGLCK G+  +A  LF  L R    + ++  Y ++I+G CK  +L  A  
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEM 386

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           L   +    LVPN  TY+ +I G C  G   +A +L   M +    PN+ T++ +I G  
Sbjct: 387 LLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLC 446

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           +     +   LL+K+    +  D    +I++ +  +   +  SL  F
Sbjct: 447 KKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFF 493



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 26/142 (18%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T+TS+I G C       A  LF ++   GC PD  TY  L++GLC+ S    A NL
Sbjct: 538 PTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597

Query: 81  FEEMANGN------------GEFGVVCEPNTV--------------TYTTIIDGLCKEGF 114
           ++ M +               E+    + +T               T  T++  LC EG 
Sbjct: 598 YDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGK 657

Query: 115 VDKAKELLLQMKDKNIKPNVVT 136
           +D A     ++ DK    N VT
Sbjct: 658 LDMAALFFHKLLDKEPNVNRVT 679


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 229/474 (48%), Gaps = 47/474 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC---RTSHTIVA 77
           P   TF+ +I G C +  I    +L   +  F CEP+ F Y  ++N  C   RTS  +  
Sbjct: 54  PCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAW 113

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
            NL  E           C P  VT+ T+I+  CKEG V +A++L   +K+    PN + Y
Sbjct: 114 FNLMIERG---------CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 164

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            +++ G+   ++ ++A  L+ EM  +G+ P+ +TFN+++    K G+ ++  RLL  +  
Sbjct: 165 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 224

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK------ 251
            G+ PD   ++  + G C  GR++ A E  + M   G   ++ +++ +I  Y +      
Sbjct: 225 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 284

Query: 252 -----------------------------NKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
                                        N  ++ A  L  +M+ KG+  + +    L  
Sbjct: 285 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 344

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
             F+   V  A  L+ EM+R G+  D   +  FIDGL K G + EA  +F  +       
Sbjct: 345 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIP 404

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           +  AYNSLI G CK G+L  AL+L + +    L+P++ T +++IGGLC  G+M  A ++F
Sbjct: 405 NNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVF 464

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +DM +  + P++IT++ LI G+ +  +      L+++M      PD +  +I +
Sbjct: 465 MDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRI 518



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 218/445 (48%), Gaps = 6/445 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S        +++    P  VTF ++I   C E  ++EA  LF  L+  G  P+   Y
Sbjct: 105 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 164

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG  +      A  L+EEM            P+ +T+  ++ G  K G  +    L
Sbjct: 165 NTLMNGYVKMREIDQANMLYEEMRKKG------IAPDGITFNILVSGHYKYGREEDGDRL 218

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  +    + P+   +   + G C+A   +EA    ++M+++G+ P+++ FN ++    +
Sbjct: 219 LKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQ 278

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G  D+A     LM+  G+ P   T ++LL G  + GR+  A EL   M   G      +
Sbjct: 279 AGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMA 338

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++L++ + K  ++ GA SL+ EM  +GI PDVV  +    GL +   VE A+ +F EM 
Sbjct: 339 FTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEML 398

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G+  + + Y + I G CK G + EA++L   +R      DI   N +I GLCK GR+ 
Sbjct: 399 RKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMR 458

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+ +F  +    L P+++TY+ +I G C    M  A +L   M  +   P++ T+++ I
Sbjct: 459 SAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRI 518

Query: 422 RGFIRINEPSKVIELLHKMKEINVM 446
            GF      ++ + +L ++    ++
Sbjct: 519 HGFCSSRRMNRAVLMLDELVSAGIL 543



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 208/452 (46%), Gaps = 6/452 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +LGR+ +    P A     L K L           LF  +   G +P  +T++ ++ G C
Sbjct: 8   ILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFC 67

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R     +  +L   M   +      CEPN   Y  +I+  C  G    A      M ++ 
Sbjct: 68  RKGCIHLGESLLHLMPKFH------CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG 121

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P VVT+ +VI  FC   +  EA++LF  + + G  PN + +N +M+   K  ++D+A+
Sbjct: 122 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 181

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L + M + G+ PD  T+N L+ G    GR      L   +  +G       + I ++G 
Sbjct: 182 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 241

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C    ++ A+    +ML KG+ P ++  N++     +    ++AF+ +  M   G+    
Sbjct: 242 CWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 301

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            T  + + GL  NG + EA EL   +       +  A+  L+D   K G +  A  L+  
Sbjct: 302 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 361

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P+VV +S  I GL   G +++A ++FL+M    ++PN   ++ LI GF +  +
Sbjct: 362 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 421

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++ ++L   M+   ++PD    ++++  L K
Sbjct: 422 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCK 453



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 169/345 (48%)

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A E+L +M++  ++P+      + +      D+    +LF +++ +G QP   TF+ I+
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              C+ G +     LL LM +    P+AF YN +++  C+ GR + A   F  M   GC 
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
            TV +++ +IN +CK   +  A  L+  +   G  P+ +++NTL  G  ++ ++++A  L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           ++EM++ G+A D  T+   + G  K G   +   L   + +L    D   ++  + GLC 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +GRL+ A+E    +    L P+++ ++ +I      G  DKA + +  M    + P+  T
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              L+ G        +  EL+ +M E  +  +    ++++D   K
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFK 348



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 146/311 (46%)

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A  +   M + GV+P+     ++   L + G      +L   +I+ G +P  +T++ ++
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            GFC  G ++  + L   M    C+   F+Y+I+IN  C       AL+ ++ M+ +G  
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P VV  NT+     +   V  A KLFD ++  G + +   Y T ++G  K   I +A  L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           +  +R      D   +N L+ G  K GR E    L + +    L+P+   + I + GLC 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G++D+A +  +DM E  + P++I F+ +I  + +     K  E    M    + P  S 
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 452 VSIVVDLLAKN 462
            S ++  L+ N
Sbjct: 304 CSSLLMGLSIN 314


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 240/472 (50%), Gaps = 7/472 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+V     V   + K    P+  T+  LI  LC   ++  A  L   ++  G  P+V T
Sbjct: 356 MGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRT 414

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
              +V+ LC++     A  +FE+M         VC P+ +T+ ++IDGL K G VD A +
Sbjct: 415 VNIMVDRLCKSQKLDEACAIFEQMDYK------VCTPDEITFCSLIDGLGKVGRVDDAYK 468

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M D + + N + YTS+I+ F       +  +++ +M++Q   P++   N  MD + 
Sbjct: 469 IYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMF 528

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+ ++   + + +      PDA +Y+ L+ G    G  N   ELF SM+  GC     
Sbjct: 529 KAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+I+I+G+CK  ++  A  L  EM +KG +P VV + ++  GL +I +++ A+ LF+E 
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +   +  +   Y + IDG  K G I EA  +   L       ++  +NSL+D L K+  +
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEI 708

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL  F+S+      PN VTY I+I GLC   + +KA   + +M++  + P+ I++  +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           I G  +    ++   L  + K    +PD++  + +++ L+    ++++   F
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 229/464 (49%), Gaps = 9/464 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V   +     I  +   PD VT+TS+I  LC  +R+ EA  +F  L      P  + 
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310

Query: 61  YTTLVNGLCRTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y T++ G         A +L E + A G+        P+ + Y  I+  L K G VD+A 
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGS-------IPSVIAYNCILTCLRKMGKVDEAL 363

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            +  +MK K+  PN+ TY  +I   C A   + A  L   M   G+ PNV T N+++D L
Sbjct: 364 RVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRL 422

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK+ K+DEA  + + M      PD  T+ +L+DG    GRV+ A +++  M    C+   
Sbjct: 423 CKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNS 482

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+ LI  +  +   E    +Y +M+++   PD+ + NT    +F+  + E+   +F+E
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           ++      D  +Y   I GL K G+  E  ELF++++   C  D RAYN +IDG CK G+
Sbjct: 543 IKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A +L   +      P VVTY  +I GL    ++D+A  LF + +   +  NV+ +  
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           LI GF ++    +   +L ++ +  + P+    + ++D L K E
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAE 706



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 239/488 (48%), Gaps = 30/488 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++  GF V+  + K  F P    +T+LI    A +       LF +++  G EP V  +T
Sbjct: 148 KLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFT 207

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGN---------------GEFGVV------------- 94
           TL+ G  +      AL+L +EM + +               G+ G V             
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267

Query: 95  -CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
             +P+ VTYT++I  LCK   +D+A E+   ++     P    Y ++I G+  A  ++EA
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             L      +G  P+V+ +N I+  L K GK+DEA R+ + M +    P+  TYN L+D 
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAA-PNLSTYNILIDM 386

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C  G+++ A EL  SM+  G    V + +I+++  CK+++++ A +++ +M  K   PD
Sbjct: 387 LCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPD 446

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            +   +L  GL ++ +V+ A+K++++M  +    ++  Y + I     +G   +  +++ 
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +    C  D++  N+ +D + K+G  E    +F  +     VP+  +YSI+I GL   G
Sbjct: 507 DMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAG 566

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
             ++  +LF  M+E   V +   ++++I GF +  + +K  +LL +MK     P      
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626

Query: 454 IVVDLLAK 461
            V+D LAK
Sbjct: 627 SVIDGLAK 634



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 222/469 (47%), Gaps = 7/469 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +LG +  + F P   T   ++      +++ E   +   +R F   P    YTTL+    
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFS 179

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
             +H+ + L LF++M     E G   EP    +TT+I G  KEG VD A  LL +MK  +
Sbjct: 180 AVNHSDMMLTLFQQMQ----ELGY--EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +  ++V Y   I  F      + A + F E+   G++P+ VT+  ++  LCK  ++DEA 
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            + + + ++   P  + YNT++ G+   G+ + A  L     + G   +V +Y+ ++   
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  +++ AL ++ EM  K   P++  +N L   L    +++ AF+L D MQ+ G+  + 
Sbjct: 354 RKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNV 412

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            T    +D LCK+  + EA  +F  +    C  D   + SLIDGL K GR++ A +++  
Sbjct: 413 RTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEK 472

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +       N + Y+ +I    N G+ +    ++ DM      P++   +  +    +  E
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGE 532

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           P K   +  ++K    +PDA   SI++  L K   +  +   F   ++Q
Sbjct: 533 PEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 159/335 (47%), Gaps = 6/335 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    G  +   I    F PDA +++ LI GL       E   LF  ++  GC  D   Y
Sbjct: 531 GEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C+      A  L EEM           EP  VTY ++IDGL K   +D+A  L
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKG------FEPTVVTYGSVIDGLAKIDRLDEAYML 644

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + K K I+ NVV Y+S+I GF      +EA  +  E+M +G+ PNV T+N ++D L K
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVK 704

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA      M +    P+  TY  L++G C   + N A   +  M+  G K +  S
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+G  K   I  A +L+    + G  PD   +N +  GL   ++   AF LF+E +
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           R G+     T    +D L KN  + +A  +   LR
Sbjct: 825 RRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 169/331 (51%), Gaps = 7/331 (2%)

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +Y S++      ++++   ++  EM   G  P+V T   ++    K  K+ E   ++  M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            +   RP    Y TL+  F      +    LF  M+ +G + TV  ++ LI G+ K   +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + ALSL  EM S  +  D+V++N       ++ +V+ A+K F E++ NG+  D  TY + 
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 316 IDGLCKNGYIVEAVELFHTL---RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
           I  LCK   + EAVE+F  L   R + C +   AYN++I G   +G+ + A  L      
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTY---AYNTMIMGYGSAGKFDEAYSLLERQRA 336

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
              +P+V+ Y+ ++  L   G++D+A  +F +M+++A  PN+ T+++LI    R  +   
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDC 395

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             EL   M++  + P+   V+I+VD L K++
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 230/469 (49%), Gaps = 31/469 (6%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC  P+ VT+ +L+ G   + ++     +   +   GC P+   + +LV+  C       
Sbjct: 306 SCI-PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 364

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE------GFVDKAKELLLQMKDKNI 130
           A  L   M          C P  V Y   I  +C +        +D A+++  +M   N 
Sbjct: 365 AYKLLNRMTTCG------CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANC 418

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
             N V   +  R  C    +++A +L  EMM +G  P+  T++ ++  LC   K+++A  
Sbjct: 419 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 478

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M   GV PD +TY  L+D FC  G +  A+ LF  M S+GC  TV +Y+ LI+ Y 
Sbjct: 479 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 538

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM---------- 300
           K K++  A  ++  M+  G +P+ V +  L  GL +   + +AF+++ ++          
Sbjct: 539 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 598

Query: 301 ------QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                  R+ +A +  TY   +DGLCK   +  A EL   +    CE +   Y++LIDG 
Sbjct: 599 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 658

Query: 355 CKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           CK+G+++ A E+F  +  CG L P+V TY+ +I  +  DG++D A  +   M +++  PN
Sbjct: 659 CKAGKIDSAQEVFLQMTKCGYL-PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 717

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           V+T+  +I G  RI E  K ++LL  M+E    P+    + ++D L ++
Sbjct: 718 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 179/335 (53%), Gaps = 22/335 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+    F ++  +++  F PD  T++ +I  LC  +++ +A  LF ++++ G  PDV+T
Sbjct: 435 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 494

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++  C+      A  LFEEM +      V C P  VTYT +I    K   V +A +
Sbjct: 495 YTILIDSFCKAGLIEQAQWLFEEMRS------VGCSPTVVTYTALIHAYLKAKQVPQAND 548

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG---------------- 164
           +  +M D   +PN VTY +++ G C A + ++A  ++ +++                   
Sbjct: 549 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 608

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           + PNVVT+  ++D LCK  K+D A  LLD M+  G  P+   Y+ L+DGFC  G+++ A+
Sbjct: 609 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 668

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           E+F+ M   G   +V +Y+ LI+   K+  ++ A+ + S+ML     P+VV +  +  GL
Sbjct: 669 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 728

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             I + E+A KL   M+  G + +  TY   IDGL
Sbjct: 729 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 183/364 (50%), Gaps = 22/364 (6%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G +L +    + V   +  + LC   +  +A  L  ++   G  PD  TY+ ++  LC
Sbjct: 409 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 468

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
             +    A  LF+EM       GV   P+  TYT +ID  CK G +++A+ L  +M+   
Sbjct: 469 HATKVEKAFLLFQEMKM----VGVT--PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 522

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P VVTYT++I  +  AK   +A  +F  M+D G +PN VT+  ++D LCK G + +A 
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582

Query: 190 RLLDLMI----------------QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            +   +I                +H + P+  TY  L+DG C   +V+HA EL  +M S 
Sbjct: 583 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 642

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GC+     Y  LI+G+CK  +I+ A  ++ +M   G  P V  + +L   +F+  +++ A
Sbjct: 643 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 702

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            K+  +M ++    +  TY   IDGLC+ G   +A++L   +    C  ++  Y +LIDG
Sbjct: 703 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 762

Query: 354 LCKS 357
           L +S
Sbjct: 763 LGQS 766



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 217/509 (42%), Gaps = 66/509 (12%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LGR+    + P  VT+ +L++ L +  ++     +  ++   G   D FT     + LC+
Sbjct: 197 LGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCK 256

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 AL++ E       +F +    +TV  T +I GL +  + D+A   L +M+  + 
Sbjct: 257 EGRWADALDMIERE-----DFKL----DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSC 307

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PNVVTY +++ GF   K     KR+   MM +G  PN   FN ++   C       A +
Sbjct: 308 IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYK 367

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGR------VNHAKELFVSMESMGCKHTVFSYSI 244
           LL+ M   G  P    YN  +   C   +      ++ A++++  M +  C     + + 
Sbjct: 368 LLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN 427

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
                C   + + A  L  EM+ KG  PD   ++ +   L    +VE+AF LF EM+  G
Sbjct: 428 FARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG 487

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI------------- 351
           V  D +TY   ID  CK G I +A  LF  +R + C   +  Y +LI             
Sbjct: 488 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 547

Query: 352 ----------------------DGLCKSGRLEIALELFRSL-------------PC---G 373
                                 DGLCK+G +  A E++  L             PC    
Sbjct: 548 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 607

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            L PNVVTY  ++ GLC   ++D A +L   M  +   PN I +D LI GF +  +    
Sbjct: 608 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSA 667

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
            E+  +M +   +P     + ++D + K+
Sbjct: 668 QEVFLQMTKCGYLPSVHTYTSLIDRMFKD 696



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/433 (20%), Positives = 166/433 (38%), Gaps = 73/433 (16%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y  + D L  +G    A+ LL ++ +++ +        ++R  C    WNEA      + 
Sbjct: 142 YDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLK 201

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           D G +P+ VT+N ++  L   G++D   R+   M + G   D FT        C  GR  
Sbjct: 202 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 261

Query: 222 HAKELF----VSMESMGCKH----------------------------TVFSYSILINGY 249
            A ++       ++++ C H                             V +Y  L++G+
Sbjct: 262 DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 321

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K K++     + + M+++G  P+  + N+L            A+KL + M   G     
Sbjct: 322 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 381

Query: 310 WTYRTFIDGLCKN-----------------------------------------GYIVEA 328
             Y  FI  +C                                           G   +A
Sbjct: 382 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 441

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            +L   +       D   Y+ +I  LC + ++E A  LF+ +    + P+V TY+I+I  
Sbjct: 442 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 501

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C  G +++A+ LF +M      P V+T+  LI  +++  +  +  ++ H+M +    P+
Sbjct: 502 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 561

Query: 449 ASIVSIVVDLLAK 461
                 +VD L K
Sbjct: 562 DVTYGALVDGLCK 574


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 228/441 (51%), Gaps = 11/441 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    +  ++  L  E+R      +++ ++  G EP+VFTY  L+  LC+ +    A  L
Sbjct: 144 PTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL 203

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM++        C+P+ V+YTT+I  LCK G V +A+EL +     +  P+V  Y ++
Sbjct: 204 LVEMSSKG------CDPDEVSYTTLISSLCKLGKVKEARELAM-----SFTPSVPVYNAL 252

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C    + EA +L  EMM++G+ PNV+++  I++ L   G ++ +  +L  M   G 
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  T+ +L+ GF L G  + A + +  M   G    V +Y+ L++G C  + +  A+S
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++++M   G  P+V  ++ L  G  +   ++ A ++++ M  +G   +   Y   +D LC
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           +N    +A  L   +++  C  +   +N+ I GLC SGR++ A+++F  +      PN  
Sbjct: 433 RNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTT 492

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++  L  D +  +A  L  DME   +  N++T++ +I G+       + +ELL KM
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552

Query: 441 KEINVMPDASIVSIVVDLLAK 461
                 PDA  V+IV+D   K
Sbjct: 553 VVRGTKPDAITVNIVIDAYCK 573



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 207/416 (49%), Gaps = 6/416 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G V   R L   FTP    + +LI G+C E    EA  L  ++   G +P+V +YTT++N
Sbjct: 230 GKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIIN 289

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            L    +  ++L +  +M      F   C PN  T+T++I G   +G   +A +   +M 
Sbjct: 290 ALSDAGNVELSLAVLAKM------FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            + + PNVV Y +++ G C  +   +A  +F +M   G  PNV T++ ++D   K G +D
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            AS + + MI HG  P+   Y  ++D  C     N A  L  +M+   C     +++  I
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G C +  ++ A+ ++ +M + G  P+   +N L   L +  +   AF L  +M+  G+ 
Sbjct: 464 KGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIE 523

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY T I G C  G + EA+EL   + +   + D    N +ID  CK G++ IA++L
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
              L  G   P+++ Y+ +I G+C    +++A      M    + PNV T+++L+R
Sbjct: 584 MDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 214/433 (49%), Gaps = 11/433 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K    P+  T+  L+K LC  +R+  A  L  ++   GC+PD  +YTTL++ LC+     
Sbjct: 174 KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVK 233

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A            E  +   P+   Y  +I+G+CKE   ++A +LL +M +K I PNV+
Sbjct: 234 EAR-----------ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI 282

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +YT++I     A +   +  +  +M  +G  PN+ TF  ++      G   EA    D M
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           I+ GV P+   YN L+ G C    +  A  +F  ME  GC   V +YS LI+GY K  ++
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +GA  +++ M++ G  P+VV +  +   L       +A+ L + MQ      +T T+ TF
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I GLC +G +  A+++F  +    C  +   YN L+D L K  R   A  L + +    +
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
             N+VTY+ +I G C  G + +A +L   M      P+ IT +++I  + +  + +  I+
Sbjct: 523 ELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQ 582

Query: 436 LLHKMKEINVMPD 448
           L+ ++      PD
Sbjct: 583 LMDRLSAGKWHPD 595



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 220/447 (49%), Gaps = 12/447 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C  PD V++T+LI  LC   ++ EA  L          P V  Y  L+NG+C+     
Sbjct: 210 KGC-DPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFE 263

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  L +EM N     G+  +PN ++YTTII+ L   G V+ +  +L +M  +   PN+ 
Sbjct: 264 EAFQLLDEMMNK----GI--DPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLH 317

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T+TS+I+GF      +EA   +  M+ +GV PNVV +N +M  LC    + +A  + + M
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
             +G  P+  TY+ L+DG+   G ++ A E++  M + GC   V +Y+ +++  C+N   
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  L   M  +   P+ V  NT   GL    +V+ A K+FD+M  +G   +T TY   
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           +D L K+    EA  L   +     E ++  YN++I G C +G L  ALEL   +     
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+ +T +I+I   C  G+++ A  L   +      P++I +  LI G        + I 
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKN 462
            L +M    + P+ +  +++V  L  N
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 180/411 (43%), Gaps = 55/411 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     VL ++     +P+  TFTSLIKG   +    EA   + ++   G  P+V  Y
Sbjct: 295 GNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAY 354

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             L++GLC       A+++F +M  NG       C PN  TY+ +IDG  K G +D A E
Sbjct: 355 NALMHGLCSKRSLGDAVSVFNQMEING-------CCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M      PNVV YT ++   C    +N+A  L   M  +   PN VTFN  +  LC
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G++D A ++ D M   G  P+  TYN LLD      R   A  L   ME  G +  + 
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLV 527

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I GYC    +  AL L  +M+ +G KPD +                         
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAI------------------------- 562

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                     T    ID  CK G +  A++L   L   K   DI AY SLI G+C    +
Sbjct: 563 ----------TVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           E A+   R +    + PNV T+++++            R LF +M  +  V
Sbjct: 613 EEAIVYLRRMLSEGISPNVATWNVLV------------RHLFSNMGHSGAV 651



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 185/389 (47%), Gaps = 10/389 (2%)

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           +AL  F+ +AN         +   +TY  +I+ L  E  +D  + LL QMK + I  +  
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
            + SVI  +  A    +A + F  M D  V+P V  +N I+D L    +    + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            + G+ P+ FTYN LL   C   RV+ A +L V M S GC     SY+ LI+  CK  ++
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A       L+    P V ++N L  G+ + +  E AF+L DEM   G+  +  +Y T 
Sbjct: 233 KEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I+ L   G +  ++ +   +    C  ++  + SLI G    G    AL+ +  +    +
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           VPNVV Y+ ++ GLC+   +  A  +F  ME N   PNV T+  LI G+ +  +     E
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           + + M      P+    + +VD+L +N +
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSM 436



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 166/330 (50%), Gaps = 6/330 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+++    P+ V + +L+ GLC++  + +A ++F ++ + GC P+V TY+ L++G  +  
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A  ++  M          C PN V YT ++D LC+    ++A  L+  M+ +N  P
Sbjct: 401 DLDGASEVWNWMITHG------CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPP 454

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           N VT+ + I+G C +   + A ++F +M + G  PN  T+N ++D L K+ +  EA  L+
Sbjct: 455 NTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLV 514

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M   G+  +  TYNT++ G+C  G +  A EL   M   G K    + +I+I+ YCK 
Sbjct: 515 KDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            ++  A+ L   + +    PD++ + +L  G+     VE A      M   G++ +  T+
Sbjct: 575 GKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATW 634

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
              +  L  N     AV+      I++ +F
Sbjct: 635 NVLVRHLFSNMGHSGAVQFLDASSIMQPKF 664


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 228/441 (51%), Gaps = 11/441 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    +  ++  L  E+R      +++ ++  G EP+VFTY  L+  LC+ +    A  L
Sbjct: 144 PTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL 203

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM++        C+P+ V+YTT+I  LCK G V +A+EL +     +  P+V  Y ++
Sbjct: 204 LVEMSSKG------CDPDEVSYTTLISSLCKLGKVKEARELAM-----SFTPSVPVYNAL 252

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C    + EA +L  EMM++G+ PNV+++  I++ L   G ++ +  +L  M   G 
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  T+ +L+ GF L G  + A + +  M   G    V +Y+ L++G C  + +  A+S
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++++M   G  P+V  ++ L  G  +   ++ A ++++ M  +G   +   Y   +D LC
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           +N    +A  L   +++  C  +   +N+ I GLC SGR++ A+++F  +      PN  
Sbjct: 433 RNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTT 492

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++  L  D +  +A  L  DME   +  N++T++ +I G+       + +ELL KM
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552

Query: 441 KEINVMPDASIVSIVVDLLAK 461
                 PDA  V+IV+D   K
Sbjct: 553 VVRGTKPDAITVNIVIDAYCK 573



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 207/416 (49%), Gaps = 6/416 (1%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G V   R L   FTP    + +LI G+C E    EA  L  ++   G +P+V +YTT++N
Sbjct: 230 GKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIIN 289

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            L    +  ++L +  +M      F   C PN  T+T++I G   +G   +A +   +M 
Sbjct: 290 ALSDAGNVELSLAVLAKM------FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            + + PNVV Y +++ G C  +   +A  +F +M   G  PNV T++ ++D   K G +D
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            AS + + MI HG  P+   Y  ++D  C     N A  L  +M+   C     +++  I
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
            G C +  ++ A+ ++ +M + G  P+   +N L   L +  +   AF L  +M+  G+ 
Sbjct: 464 KGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIE 523

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +  TY T I G C  G + EA+EL   + +   + D    N +ID  CK G++ IA++L
Sbjct: 524 LNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
              L  G   P+++ Y+ +I G+C    +++A      M    + PNV T+++L+R
Sbjct: 584 MDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 214/433 (49%), Gaps = 11/433 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K    P+  T+  L+K LC  +R+  A  L  ++   GC+PD  +YTTL++ LC+     
Sbjct: 174 KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVK 233

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A            E  +   P+   Y  +I+G+CKE   ++A +LL +M +K I PNV+
Sbjct: 234 EAR-----------ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI 282

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +YT++I     A +   +  +  +M  +G  PN+ TF  ++      G   EA    D M
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           I+ GV P+   YN L+ G C    +  A  +F  ME  GC   V +YS LI+GY K  ++
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           +GA  +++ M++ G  P+VV +  +   L       +A+ L + MQ      +T T+ TF
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I GLC +G +  A+++F  +    C  +   YN L+D L K  R   A  L + +    +
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
             N+VTY+ +I G C  G + +A +L   M      P+ IT +++I  + +  + +  I+
Sbjct: 523 ELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQ 582

Query: 436 LLHKMKEINVMPD 448
           L+ ++      PD
Sbjct: 583 LMDRLSAGKWHPD 595



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 220/447 (49%), Gaps = 12/447 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C  PD V++T+LI  LC   ++ EA  L          P V  Y  L+NG+C+     
Sbjct: 210 KGC-DPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFE 263

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  L +EM N     G+  +PN ++YTTII+ L   G V+ +  +L +M  +   PN+ 
Sbjct: 264 EAFQLLDEMMNK----GI--DPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLH 317

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T+TS+I+GF      +EA   +  M+ +GV PNVV +N +M  LC    + +A  + + M
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
             +G  P+  TY+ L+DG+   G ++ A E++  M + GC   V +Y+ +++  C+N   
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  L   M  +   P+ V  NT   GL    +V+ A K+FD+M  +G   +T TY   
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           +D L K+    EA  L   +     E ++  YN++I G C +G L  ALEL   +     
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+ +T +I+I   C  G+++ A  L   +      P++I +  LI G        + I 
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKN 462
            L +M    + P+ +  +++V  L  N
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 181/411 (44%), Gaps = 55/411 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     VL ++     +P+  TFTSLIKG   +    EA   + ++   G  P+V  Y
Sbjct: 295 GNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAY 354

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
             L++GLC       A+++F +M  NG       C PN  TY+ +IDG  K G +D A E
Sbjct: 355 NALMHGLCSKRSLGDAVSVFNQMEING-------CCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M      PNVV YT ++   C    +N+A  L   M  +   PN VTFN  +  LC
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G++D A ++ D M   G  P+  TYN LLD      R   A  L   ME  G +  + 
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLV 527

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I GYC    +  AL L  +M+ +G KPD +  N +                    
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV-------------------- 567

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                          ID  CK G +  A++L   L   K   DI AY SLI G+C    +
Sbjct: 568 ---------------IDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           E A+   R +    + PNV T+++++            R LF +M  +  V
Sbjct: 613 EEAIVYLRRMLSEGISPNVATWNVLV------------RHLFSNMGHSGAV 651



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 185/389 (47%), Gaps = 10/389 (2%)

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           +AL  F+ +AN         +   +TY  +I+ L  E  +D  + LL QMK + I  +  
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
            + SVI  +  A    +A + F  M D  V+P V  +N I+D L    +    + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            + G+ P+ FTYN LL   C   RV+ A +L V M S GC     SY+ LI+  CK  ++
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A       L+    P V ++N L  G+ + +  E AF+L DEM   G+  +  +Y T 
Sbjct: 233 KEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I+ L   G +  ++ +   +    C  ++  + SLI G    G    AL+ +  +    +
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           VPNVV Y+ ++ GLC+   +  A  +F  ME N   PNV T+  LI G+ +  +     E
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           + + M      P+    + +VD+L +N +
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSM 436



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 143/284 (50%), Gaps = 6/284 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+++LI G      +  A+ ++  +   GC P+V  YT +V+ LCR S    A  L
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCL 443

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            E M   N      C PNTVT+ T I GLC  G VD A ++  QM +    PN  TY  +
Sbjct: 444 IENMQVEN------CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +      + + EA  L  +M  +G++ N+VT+N I+   C  G + EA  LL  M+  G 
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PDA T N ++D +C  G+VN A +L   + +      + +Y+ LI+G C +  +E A+ 
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
               MLS+GI P+V   N L   LF       A +  D +  +G
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSG 661



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 126/251 (50%), Gaps = 6/251 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V +T ++  LC  S   +A  L   ++V  C P+  T+ T + GLC +     A+ +
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F++M N        C PNT TY  ++D L K+    +A  L+  M+ + I+ N+VTY ++
Sbjct: 479 FDQMGNSG------CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTI 532

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C A    EA  L  +M+ +G +P+ +T N+++D  CK GK++ A +L+D +     
Sbjct: 533 IYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKW 592

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD   Y +L+ G C    V  A      M S G    V ++++L+     N    GA+ 
Sbjct: 593 HPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQ 652

Query: 261 LYSEMLSKGIK 271
               +L  G +
Sbjct: 653 FLDAVLGSGFE 663


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 203/400 (50%), Gaps = 16/400 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL------RVFGCE 55
           GRV     +L  ++K  + PD  T + LI  LC   +I EA      +      R   C 
Sbjct: 63  GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSC- 121

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
              F+Y +L+N LC+      A  +F  M +   E  VV  P+ V+Y+ +IDG CK   +
Sbjct: 122 ---FSYNSLLNSLCKAKKVHQAFAIFSTMVS---ERSVV--PDVVSYSILIDGFCKIDEL 173

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            +A++L  QM D N  PNV TY + + G        +A+ ++ EM+  G  P+V+T++ +
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +       K D+A  L + MI  G RP+A TYN LL G C   + + A ELF  M   GC
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                +Y+ L+ G+C   +IE A+ ++ EM+SKG  PDVV +N L  G F   +   A +
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGL 354
           LF  M       DT ++   IDGL K   + +AVE+F  + +   C  D+  YNSLI GL
Sbjct: 354 LFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 413

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           C   RL  A+++F+ +    L P+   +++++  +   G 
Sbjct: 414 CGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 218/404 (53%), Gaps = 12/404 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T  S+I+ LC   R+  A +L   +   G  PD+ T++ L+N LC+      A    + M
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRG 143
                     C     +Y ++++ LCK   V +A  +   M  ++++ P+VV+Y+ +I G
Sbjct: 111 NRTISTRASSC----FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDG 166

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           FC   +   A++L+ +M+D    PNV T+N  ++ L + G++ +A  + + MI  G  PD
Sbjct: 167 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPD 226

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             TY+TL+ GF L  + + A ELF +M S GC+    +Y+ L++G CK  + + A  L+ 
Sbjct: 227 VITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 286

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           +M+ +G  PD V + TL  G   + ++E+A ++FDEM   G   D   Y   + G  + G
Sbjct: 287 KMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 346

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVLVPNV 379
              EA +LF  +   +C+ D  ++N +IDGL K+ RL+ A+E+F  +     C    P++
Sbjct: 347 KPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS---PDL 403

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           VTY+ +I GLC + ++ +A  +F +++   + P+   F++L+  
Sbjct: 404 VTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 227/443 (51%), Gaps = 13/443 (2%)

Query: 24  VTFTSLIKGLCAESRI---MEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           V +T+ + GLC   +I    EA     +       P   T  +++  LC+      AL+L
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD--KNIKPNVVTYT 138
            E M          C P+  T++ +I+ LCK   + +A+E L  M         +  +Y 
Sbjct: 72  LETMIKRG-----YC-PDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYN 125

Query: 139 SVIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           S++   C AK  ++A  +F  M+ ++ V P+VV++++++D  CK  ++  A +L   MI 
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
               P+  TYN  L+G    GR+  A+ ++  M S GC   V +YS LI+G+   ++ + 
Sbjct: 186 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQ 245

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L+  M+S+G +P+ V +N L  GL +  + + A +LF +M   G   D  TY T + 
Sbjct: 246 AHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLY 305

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C  G I +AVE+F  +     + D+ AYN L+ G  ++G+   A +LF+ +      P
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKP 365

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AVVPNVITFDMLIRGFIRINEPSKVIEL 436
           + V+++IMI GL    ++D A ++F  ME++    P+++T++ LI G       S+ +++
Sbjct: 366 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKV 425

Query: 437 LHKMKEINVMPDASIVSIVVDLL 459
             ++  + + PD    +++++ +
Sbjct: 426 FKEIDRLKLSPDPHAFNVLLEAM 448



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 196/386 (50%), Gaps = 6/386 (1%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV---TYTSVIRGFCYAKDWNEAK 154
           N V +T  + GLCK G +++A E    M++           T  SVI+  C A   + A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH-GVRPDA-FTYNTLLD 212
            L   M+ +G  P++ T +++++ELCK  K+ EA   L  M +    R  + F+YN+LL+
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 213 GFCLTGRVNHAKELFVSMES-MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
             C   +V+ A  +F +M S       V SYSILI+G+CK  E+  A  LY +M+     
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P+V  +N    GL    ++  A  +++EM   G + D  TY T I G        +A EL
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +    C  +   YN L+ GLCK  + + A ELFR +      P+ VTY+ ++ G CN
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCN 309

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            G++++A ++F +M      P+V+ ++ L++GF R  +P +  +L   M      PD   
Sbjct: 310 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369

Query: 452 VSIVVDLLAKNEISLNSLPSFTVHEQ 477
            +I++D L+K +   +++  F   EQ
Sbjct: 370 HNIMIDGLSKAKRLDDAVEVFERMEQ 395



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V   ++     PD V +  L+KG     +  EA  LF  +    C+PD  +
Sbjct: 310 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  +++GL +      A+ +FE M   +G     C P+ VTY ++I GLC E  + +A +
Sbjct: 370 HNIMIDGLSKAKRLDDAVEVFERMEQDHG-----CSPDLVTYNSLIFGLCGEQRLSEAMK 424

Query: 121 LLLQMKDKNIKPN 133
           +  ++    + P+
Sbjct: 425 VFKEIDRLKLSPD 437


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 231/445 (51%), Gaps = 32/445 (7%)

Query: 32  GLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF 91
           GL ++ ++M +  LF      G  PDVF+   LV+ LC+     +AL         N + 
Sbjct: 108 GLVSQVKLMYSDMLFC-----GVVPDVFSVNVLVHSLCKVGDLDLALGYLR-----NND- 156

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
             V + + VTY T+I G C++G VD+   LL +M  + +  + +T   +++G+C      
Sbjct: 157 --VVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQ 214

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
            A+ +   ++D GV  +V+  N ++D  C+ G M +A+ L++   +  V+ D  TYNTLL
Sbjct: 215 YAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLL 274

Query: 212 DGFCLTGRVNHAKELF-------------------VSMESMGCKHTVFSYSILINGYCKN 252
             FC TG +  A+ LF                      E    + T+ +Y+ LI  YCK 
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +E + SLY +M+  GI PDVV  +++  G     ++  A  LF EM   G+  +  +Y
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSY 394

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I+ L K+G ++EA  L   + +    FDI    +++DGL K G+ + A E+F ++  
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L PN VTYS ++ G C  G+M+ A  +   ME+  V PNVITF  +I G+ +    SK
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSK 514

Query: 433 VIELLHKMKEINVMPDASIVSIVVD 457
            +++L +M + NVMP+  + +I++D
Sbjct: 515 AVDVLREMVQRNVMPNTIVYAILID 539



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 225/443 (50%), Gaps = 7/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+T+LI   C    + E+ +L+ K+ + G  PDV T ++++ G CR      A  L
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL 378

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM     E G+  +PN V+Y TII+ L K G V +A  L  QM  + I  ++VT T+V
Sbjct: 379 FREMY----EMGL--DPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTV 432

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G        EA+ +F  ++   + PN VT++ ++D  CK GKM+ A  +L  M +  V
Sbjct: 433 MDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHV 492

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  T++++++G+   G ++ A ++   M           Y+ILI+GY K  E + A  
Sbjct: 493 PPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADD 552

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
              EM S+ ++   VI + L   L  + +++ A  L  +M   G+  D   Y + IDG  
Sbjct: 553 FCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYF 612

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G  + A+ +   ++     FD+ AYN+LI GL + G+ +      R +  G L P+ +
Sbjct: 613 KEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELG-LAPDCI 671

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I   C  G+ + A D+  +M+   ++PN +T+++LI G  +     K    L +M
Sbjct: 672 TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM 731

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
             +  +P       +V   +++E
Sbjct: 732 LVMEFVPTPITHKFLVKAYSRSE 754



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 234/503 (46%), Gaps = 50/503 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      V   ILK    P+ VT+++L+ G C   ++  A  +  K+      P+V T
Sbjct: 439 VGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVIT 498

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG------------ 108
           +++++NG  +      A+++  EM   N        PNT+ Y  +IDG            
Sbjct: 499 FSSIINGYAKKGMLSKAVDVLREMVQRN------VMPNTIVYAILIDGYFKAGEQDVADD 552

Query: 109 LCKE-----------------------GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
            CKE                       G +D+A+ L++ M  K I P++V Y S+I G  
Sbjct: 553 FCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG-- 610

Query: 146 YAKDWNEAKRLFI--EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           Y K+ N+   L I  EM ++ ++ +VV +N ++  L + GK D    +   MI+ G+ PD
Sbjct: 611 YFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPD 669

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             TYNT+++ +C+ G+   A ++   M+S G      +Y+ILI G CK   +E A S   
Sbjct: 670 CITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALD 729

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EML     P  + H  L        + ++  ++ +++  +G+      Y T I   C+ G
Sbjct: 730 EMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLG 789

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
              +A  +   +       D+  YN+LI G C    +E AL+ +  +    + PN+ TY+
Sbjct: 790 MTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYN 849

Query: 384 IMIGGLCNDG----QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            ++GGL N G     M++   L  +M E  +VPN  T+D+L+ G+ R+    K I L  +
Sbjct: 850 TLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIE 909

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M     +P     ++++   AK+
Sbjct: 910 MITKGFVPTLKTYNVLISDYAKS 932



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 231/478 (48%), Gaps = 28/478 (5%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+ ++I G C +  + +   L +++   G   D  T   LV G CR      A  + 
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             + +G    GV    + +   T+IDG C+ G + +A EL+      ++K ++VTY +++
Sbjct: 221 YNLVDG----GVT--KDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLL 274

Query: 142 RGFCYAKDWNEAKRLFIEMMD-------------------QGVQPNVVTFNVIMDELCKN 182
           + FC   D   A+ LF E++                    + +QP +VT+  ++   CK 
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
             ++E+  L   MI +G+ PD  T +++L GFC  G++  A  LF  M  MG      SY
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSY 394

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + +IN   K+  +  A +L S+M+ +GI  D+V   T+  GLF++ + + A ++F+ + +
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +A +  TY   +DG CK G +  A  +   +       ++  ++S+I+G  K G L  
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSK 514

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+++ R +    ++PN + Y+I+I G    G+ D A D   +M+   +  + + FD+L+ 
Sbjct: 515 AVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLN 574

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
              R+    +   L+  M    + PD    + ++D   K     N L + ++ ++ +E
Sbjct: 575 NLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG---NQLAALSIVQEMKE 629



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 221/447 (49%), Gaps = 7/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++   V+   + +    P+ V++ ++I  L    R+MEA  L +++ V G   D+ T 
Sbjct: 370 GKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTC 429

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TT+++GL +   T  A  +FE +   N        PN VTY+ ++DG CK G ++ A+ +
Sbjct: 430 TTVMDGLFKVGKTKEAEEVFETILKLN------LAPNCVTYSALLDGYCKLGKMELAELV 483

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+ +++ PNV+T++S+I G+      ++A  +  EM+ + V PN + + +++D   K
Sbjct: 484 LQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFK 543

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+ D A      M    +      ++ LL+     GR++ A+ L + M S G    + +
Sbjct: 544 AGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVN 603

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GY K      ALS+  EM  K I+ DVV +N L  GL  + + +  + +   M 
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMI 662

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+A D  TY T I+  C  G   +A+++ + ++      +   YN LI GLCK+G +E
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVE 722

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A      +     VP  +T+  ++       + DK   +   +  + +  ++  ++ LI
Sbjct: 723 KAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLI 782

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
             F R+    K   +L +M +  +  D
Sbjct: 783 TVFCRLGMTRKAKVVLDEMVKRGISAD 809



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/503 (24%), Positives = 241/503 (47%), Gaps = 38/503 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++    +VL ++ K    P+ +TF+S+I G   +  + +A  +  ++      P+   
Sbjct: 474 LGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIV 533

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGE-----------------------------F 91
           Y  L++G  +     VA +  +EM +   E                             +
Sbjct: 534 YAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMY 593

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +P+ V Y ++IDG  KEG    A  ++ +MK+KNI+ +VV Y ++I+G      + 
Sbjct: 594 SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY- 652

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           + + +   M++ G+ P+ +T+N I++  C  GK ++A  +L+ M  +G+ P+A TYN L+
Sbjct: 653 DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILI 712

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C TG V  A+     M  M    T  ++  L+  Y ++++ +  L ++ ++++ G++
Sbjct: 713 GGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLE 772

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
             + ++NTL      +    +A  + DEM + G++AD  TY   I G C   ++ +A++ 
Sbjct: 773 LSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKT 832

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSG----RLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           +  + +     +I  YN+L+ GL  +G     +E   +L   +    LVPN  TY I++ 
Sbjct: 833 YSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVS 892

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           G    G   K   L ++M     VP + T+++LI  + +  +  +  ELL+ +     +P
Sbjct: 893 GYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIP 952

Query: 448 DASIVSIVVDLLAKNEISLNSLP 470
           +    S   D+L    ++L+  P
Sbjct: 953 N----SFTYDILTCGWLNLSYEP 971



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 162/357 (45%), Gaps = 21/357 (5%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M+   + P +  + +++  F  +   ++ K ++ +M+  GV P+V + NV++  LCK G
Sbjct: 84  HMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVG 143

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +D A  L  L     V  D  TYNT++ GFC  G V+    L   M   G      + +
Sbjct: 144 DLDLA--LGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCN 201

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           IL+ GYC+   ++ A  +   ++  G+  DV+  NTL  G  E   + +A +L +   R+
Sbjct: 202 ILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRS 261

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-------------------RILKCEFDI 344
            V  D  TY T +   CK G +  A  LF+ +                    I   +  +
Sbjct: 262 DVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTL 321

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y +LI   CK   +E +  L++ +    ++P+VVT S ++ G C  G++ +A  LF +
Sbjct: 322 VTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFRE 381

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           M E  + PN +++  +I    +     +   L  +M    +  D    + V+D L K
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK 438



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 135/331 (40%), Gaps = 52/331 (15%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           +   AS     M   G+ P    +NTLL  F  +G V+  K ++  M   G    VFS +
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVN 133

Query: 244 ILIN---------------------------------GYCKNKEIEGALSLYSEMLSKGI 270
           +L++                                 G+C+   ++    L SEM+ +G+
Sbjct: 134 VLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGL 193

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
             D +  N L  G   I  V+ A  +   +   GV  D     T IDG C+ G + +A E
Sbjct: 194 CFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATE 253

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL-------------------P 371
           L         + DI  YN+L+   CK+G L  A  LF  +                    
Sbjct: 254 LIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNE 313

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              L P +VTY+ +I   C    ++++  L+  M  N ++P+V+T   ++ GF R  + +
Sbjct: 314 IKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLT 373

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +   L  +M E+ + P+    + +++ L K+
Sbjct: 374 EAAVLFREMYEMGLDPNHVSYATIINSLFKS 404


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 234/460 (50%), Gaps = 7/460 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    +L + +K+C  P+AVT+ +++     + R   A  +   +   G E D++TY
Sbjct: 244 GKLSKAESMLQK-MKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTY 302

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++ LC+   +  A  L + M   N        P+  +Y T+I G   EG ++ A  +
Sbjct: 303 NIMIDKLCKLKRSARAYLLLKRMREVN------LTPDECSYNTLIHGFFGEGKINLAIYI 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM  +++KP+V TYT++I G+C     +EA+R+  EM   GV+P+ +T++ +++  CK
Sbjct: 357 FNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCK 416

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + K+  A  L+  +    +  +   Y  L+DGFC  G V+ AK++   M + G    V +
Sbjct: 417 HSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVIT 476

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LING CK   I     + S M   G+ P+ V++ TL     +    + A K F ++ 
Sbjct: 477 YSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIY 536

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R+G+ A++  +   +    + G I EA +    +  +K  FD+ ++N +ID  C+ G + 
Sbjct: 537 RSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVL 596

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  ++ ++      P++ TY  ++ GLC  G + +A++  + + E A   +  T + L+
Sbjct: 597 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 656

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G  +     + ++L  KM   N++PD    +I++D   K
Sbjct: 657 VGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK 696



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 247/546 (45%), Gaps = 65/546 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++    +  ++L+    P   T+T+LI G C   R  EA  +  ++++ G  P   TY
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVVC----------- 95
           + L+NG C+ S    AL+L + +                +G  + G V            
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLA 467

Query: 96  ---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              +P+ +TY+ +I+G+CK G + + KE+L +M+   + PN V YT+++  FC A    E
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKE 527

Query: 153 AKRLFIEMMDQGVQPN-----------------------------------VVTFNVIMD 177
           A + F+++   G+  N                                   V +FN I+D
Sbjct: 528 ALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIID 587

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
             C+ G + EA  + D M++HG  PD  TY +LL G C  G +  AKE  V +    C  
Sbjct: 588 SYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI 647

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              + + L+ G CK+  ++ AL L  +M+++ I PD   +  L  G  +  +V  A  L 
Sbjct: 648 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 707

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF-DIRAYNSLIDGLCK 356
             M   G+  DT  Y   ++GL   G +  A  +F  +   +  + D  AYNS+++G  K
Sbjct: 708 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 767

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G++     L R++    + P+  +Y+I++ G    GQ+ +   L+ DM +  + P+ +T
Sbjct: 768 GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVT 827

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
           + +LI G          ++ L KM    V PD     I++   ++     N+L  F+  +
Sbjct: 828 YRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMK 887

Query: 477 QQEEVD 482
              ++D
Sbjct: 888 WVGDID 893



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 217/459 (47%), Gaps = 41/459 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +L  + K+    D  T+  +I  LC   R   A  L  ++R     PD  +Y
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G        +A+ +F +M   +       +P+  TYT +IDG C+ G  D+A+ +
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQS------LKPSVATYTALIDGYCRNGRTDEARRV 391

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   ++P+ +TY++++ G+C       A  L   +  + +  N   + +++D  C+
Sbjct: 392 LYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQ 451

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ +A ++L  M+  G+ PD  TY+ L++G C  G ++  KE+   M+  G       
Sbjct: 452 LGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVL 511

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE---IHQVER------ 292
           Y+ L+  +CK    + AL  + ++   G+  + VIHN L    +    I + E+      
Sbjct: 512 YTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMS 571

Query: 293 --------------------------AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
                                     AF ++D M R+G   D  TY + + GLC+ G++V
Sbjct: 572 RMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 631

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A E    L    C  D +  N+L+ G+CK G L+ AL+L   +    ++P+  TY+I++
Sbjct: 632 QAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 691

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
            G C  G++  A  L   M E  +VP+ I +  L+ G +
Sbjct: 692 DGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLV 730



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 225/444 (50%), Gaps = 23/444 (5%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            D  +F  +I   C    ++EA +++  +   G  PD+ TY +L+ GLC+  H + A    
Sbjct: 578  DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 637

Query: 82   EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
              +          C  +  T  T++ G+CK G +D+A +L  +M  +NI P+  TYT ++
Sbjct: 638  VYLLEK------ACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 691

Query: 142  RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHGV 200
             GFC       A  L   M+++G+ P+ + +  +++ L   G++  AS +  +++ + G+
Sbjct: 692  DGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGL 751

Query: 201  RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
              D   YN++++G+   G++N  + L  +M       +  SY+IL++GY K  ++   L 
Sbjct: 752  YADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLY 811

Query: 261  LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            LY +M+ +GIKPD V +  L  GL E   +E A K  ++M   GV  D   +   I    
Sbjct: 812  LYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFS 871

Query: 321  KNGYIVEAVELFHTLRI---LKCEFDIR-------------AYNSLIDGLCKSGRLEIAL 364
            +   +  A++LF  ++    +   F+++             A +S++ GLCK G++E A+
Sbjct: 872  EKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAI 931

Query: 365  ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
             +F S+    +VP + T++ ++ GLC + ++D A  L   ME   +  +V+T+++LI G 
Sbjct: 932  IVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGL 991

Query: 425  IRINEPSKVIELLHKMKEINVMPD 448
                     ++L  +MK   ++P+
Sbjct: 992  CNKKCICDALDLYEEMKSKGLLPN 1015



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 227/465 (48%), Gaps = 25/465 (5%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G V   F V   +++  + PD  T+ SL++GLC    +++A      L    C  D  T 
Sbjct: 593  GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 652

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             TL+ G+C+      AL+L E+M   N        P+T TYT ++DG CK G V  A  L
Sbjct: 653  NTLLVGICKHGTLDEALDLCEKMVTRN------ILPDTYTYTILLDGFCKRGKVVPALIL 706

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDELC 180
            L  M +K + P+ + YT ++ G         A  +F E++  +G+  + + +N +M+   
Sbjct: 707  LQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYL 766

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            K G+++E  RL+  M ++ V P + +YN L+ G+   G+++    L+  M   G K    
Sbjct: 767  KGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 826

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF--- 297
            +Y +LI G C+   IE A+    +M+ +G+ PD +  + L     E  ++  A +LF   
Sbjct: 827  TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYM 886

Query: 298  -------------DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
                         ++M+  GV        + + GLCK G + EA+ +F ++        I
Sbjct: 887  KWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTI 946

Query: 345  RAYNSLIDGLCKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              + +L+ GLCK  +++ A  L + +  CG+ V +VVTY+++I GLCN   +  A DL+ 
Sbjct: 947  ATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKV-DVVTYNVLITGLCNKKCICDALDLYE 1005

Query: 404  DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +M+   ++PN+ T+  L              +LL  +++  ++P 
Sbjct: 1006 EMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 230/470 (48%), Gaps = 12/470 (2%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F  L R +  C   +  +   L+     E ++++AAA    +   G +  +F+   ++N 
Sbjct: 145 FSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNA 204

Query: 68  LCRTSHT-IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           L   + +  V L L E +   + +F +    +  T   +++ LC +G + KA+ +L +MK
Sbjct: 205 LVGINKSEYVWLFLKESL---DRKFPL----DVTTCNIVLNSLCTQGKLSKAESMLQKMK 257

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +  + PN VTY +++  +        A R+  +M   G++ ++ T+N+++D+LCK  +  
Sbjct: 258 NCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSA 316

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  LL  M +  + PD  +YNTL+ GF   G++N A  +F  M     K +V +Y+ LI
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALI 376

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +GYC+N   + A  +  EM   G++P  + ++ L  G  +  ++  A  L   ++   ++
Sbjct: 377 DGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSIS 436

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +   Y   IDG C+ G + +A ++   +     + D+  Y++LI+G+CK G +    E+
Sbjct: 437 INRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 496

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
              +    ++PN V Y+ ++   C  G   +A   F+D+  + +V N +  + L+  F R
Sbjct: 497 LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYR 556

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
               ++  +    M  + +  D +  + ++D   +     N L +F+V++
Sbjct: 557 EGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRG---NVLEAFSVYD 603


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 215/452 (47%), Gaps = 19/452 (4%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           +  F +L+    +  R  EA   F+++  F C P  F Y  +   L      ++AL L+ 
Sbjct: 144 SAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYN 203

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
            M +        C PN+ TY  ++DGLCK G    A ++  +M ++ I P+V  YT ++ 
Sbjct: 204 RMVSSG------CLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLS 257

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
             C      +A RL   M + G  P+ VT+ V +  LCK G++DEA    +L+   G   
Sbjct: 258 SLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTL 317

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
               Y+ L+DG    GR +     +  M        +  Y+ILI  + +    + A  L 
Sbjct: 318 GLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLL 377

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM  KG  PD   +NTL   LF++  ++RA  L  EM +N V  D+ T+   I GLCK 
Sbjct: 378 DEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKK 437

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG--------- 373
           G I +A+++F  +    C   +  YN+LIDGL ++G LE A  LF  +  G         
Sbjct: 438 GLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRL 497

Query: 374 VLVPNVV--TYSI--MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
            L  N V  T S+  ++ G+C  GQ+ KA  L   + E+ VVP+V+T++ LI G  +   
Sbjct: 498 TLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKN 557

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               + L  +++   + PD      ++D L +
Sbjct: 558 LDGALRLFKELQLKGISPDEITYGTLIDGLWR 589



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 232/470 (49%), Gaps = 26/470 (5%)

Query: 4   VSHGFVVLG-----RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDV 58
           V  G ++L      R++ S   P++ T+  L+ GLC     ++A  +F ++   G  PDV
Sbjct: 190 VDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDV 249

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
             YT L++ LC       A  L   M   NG     C P+ VTYT  + GLCK G VD+A
Sbjct: 250 KIYTVLLSSLCNEGRIEDAGRLLCSMKE-NG-----CPPDEVTYTVFLSGLCKAGRVDEA 303

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
                 ++D      ++ Y+ +I G   A  ++E    + EM+ + + P++  + +++  
Sbjct: 304 FHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRR 363

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
             + G+  +A  LLD M   G  PD F YNTLL      G ++ A+ L   M        
Sbjct: 364 FAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLD 423

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
             +++I+I G CK   I+ A+ ++ EM   G  P V+ +N L  GL+    +E A  LF 
Sbjct: 424 STTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFH 483

Query: 299 EMQ---------RNGVAA----DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +M+         R  + A    DT + R  +DG+C++G +++A +L   +       D+ 
Sbjct: 484 KMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVV 543

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YN+LI+GLCK+  L+ AL LF+ L    + P+ +TY  +I GL    + + A  LF ++
Sbjct: 544 TYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNI 603

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELL--HKMKEINVMPDASIVS 453
             +   P++  ++ ++R   R+ + S+ I L   +  K+ N+ P+  +++
Sbjct: 604 LRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIA 653



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 208/462 (45%), Gaps = 61/462 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  + ++   PD VT+T  + GLC   R+ EA   F  L+  G    +  Y
Sbjct: 263 GRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGY 322

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +       L+ + EM       G    P+   YT +I    + G    A  L
Sbjct: 323 SCLIDGLFQAGRFDEGLSYYTEM------LGKSISPDITLYTILIRRFAEAGRTKDAFLL 376

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +MKDK   P+   Y ++++      + + A+ L  EM+   V  +  T N+++  LCK
Sbjct: 377 LDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCK 436

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF- 240
            G +D+A ++ D M +HG  P   TYN L+DG    G +  A+ LF  ME MG   ++F 
Sbjct: 437 KGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKME-MGNNPSLFL 495

Query: 241 -------------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
                        S   L++G C++ ++  A  L   ++  G+ PDVV +NTL  GL + 
Sbjct: 496 RLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKA 555

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             ++ A +LF E+Q  G++ D  TY T IDGL +     +A  LF  +        +  Y
Sbjct: 556 KNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIY 615

Query: 348 NSLIDGLCKSGRLEIALELFRS-LP-----------------C----------------- 372
           N+++  LC+  +L  A+ L+   LP                 C                 
Sbjct: 616 NTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKID 675

Query: 373 ---GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
              G L PN   Y+I + GLC   ++D A  +F  +EE  +V
Sbjct: 676 QVYGSLNPN--PYTIWVIGLCQVRKIDDALRIFHILEEFGIV 715



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 210/512 (41%), Gaps = 131/512 (25%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L+    PD   +T L+  LC E RI +A  L   ++  GC PD  TYT  ++GLC+   
Sbjct: 240 MLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGR 299

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A + FE + +G    G++       Y+ +IDGL + G  D+      +M  K+I P+
Sbjct: 300 VDEAFHRFELLQDGGFTLGLI------GYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPD 353

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN-------------------- 173
           +  YT +IR F  A    +A  L  EM D+G  P+   +N                    
Sbjct: 354 ITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMS 413

Query: 174 ------VIMDE---------LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
                 V++D          LCK G +D+A ++ D M +HG  P   TYN L+DG    G
Sbjct: 414 EMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAG 473

Query: 219 RVNHAKELFVSMESMGCKHTVF-------------------------------------- 240
            +  A+ LF  ME MG   ++F                                      
Sbjct: 474 MLEEARMLFHKME-MGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRG 532

Query: 241 -----------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
                      +Y+ LING CK K ++GAL L+ E+  KGI PD + + TL  GL+  H+
Sbjct: 533 IIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHR 592

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI----- 344
              A  LF  + R+G       Y T +  LC+   + +A+ L+  L  L  ++++     
Sbjct: 593 ENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLW--LDYLPKKYNLSPEDE 650

Query: 345 -------------------------RAYNSL--------IDGLCKSGRLEIALELFRSLP 371
                                    + Y SL        + GLC+  +++ AL +F  L 
Sbjct: 651 VIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILE 710

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              +V      +++I  LC D  ++ A D+ +
Sbjct: 711 EFGIVVTPACCALLINYLCWDRNLNAAVDIMM 742



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 169/345 (48%), Gaps = 20/345 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     ++  +L++    D+ T   +I GLC +  I +A  +F ++   GC P V T
Sbjct: 402 VGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMT 461

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGE-------FGVVCEPNTVTYTTIIDGLCKEG 113
           Y  L++GL R      A  LF +M  GN          G     +T +   ++DG+C+ G
Sbjct: 462 YNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSG 521

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN 173
            V KA +LL  + +  + P+VVTY ++I G C AK+ + A RLF E+  +G+ P+ +T+ 
Sbjct: 522 QVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYG 581

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            ++D L +  + ++A+ L   +++ G  P    YNT++   C   +++ A  L+  ++ +
Sbjct: 582 TLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLW--LDYL 639

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI-------HNTLFVGLFE 286
             K+ +     +I    K  E +G L    E + + IK D V        +    +GL +
Sbjct: 640 PKKYNLSPEDEVIANARKCFE-DGFL---DETVKELIKIDQVYGSLNPNPYTIWVIGLCQ 695

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           + +++ A ++F  ++  G+          I+ LC +  +  AV++
Sbjct: 696 VRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDI 740



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 111/250 (44%)

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+   +  +  L+      GR   A E F  M    C+ T F Y+ +         I  A
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLA 198

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+LY+ M+S G  P+   +  L  GL +      A K+FDEM   G+  D   Y   +  
Sbjct: 199 LALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSS 258

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LC  G I +A  L  +++   C  D   Y   + GLCK+GR++ A   F  L  G     
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLG 318

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           ++ YS +I GL   G+ D+    + +M   ++ P++  + +LIR F           LL 
Sbjct: 319 LIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLD 378

Query: 439 KMKEINVMPD 448
           +MK+   +PD
Sbjct: 379 EMKDKGFVPD 388



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 3/172 (1%)

Query: 293 AFKLFDEM---QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           A  +FD +   +  G+ A +  +R  +      G   EAVE F  +    C      YN+
Sbjct: 125 AVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNA 184

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           +   L   G + +AL L+  +     +PN  TY +++ GLC  G    A  +F +M E  
Sbjct: 185 VFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERG 244

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +VP+V  + +L+              LL  MKE    PD    ++ +  L K
Sbjct: 245 IVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCK 296


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/320 (36%), Positives = 180/320 (56%), Gaps = 9/320 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRI---MEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           F P+ VT+ +LI G C   R+    +A A+  ++      P+  T+  L++G C+  +  
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            AL +FEEM +         +P  VTY ++++GLC EG +++AK LL +M   N+KPNV+
Sbjct: 321 AALKVFEEMQSQG------LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI 374

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY ++I G+C  K   EA+ LF  +  QG+ PNV+TFN ++   CK GKM+EA  L  +M
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
           ++ G  P+A TYN L+ GFC  G++   K L   M+  G K    +Y+ILI+ +C+ KE 
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP 494

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A  L  EML KG+KP  + +N L  G      +  A  L  +M++ G  A+  TY   
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVL 554

Query: 316 IDGLCKNGYIVEAVELFHTL 335
           I G C+ G + +A  L + +
Sbjct: 555 IQGYCRKGKLEDANGLLNEM 574



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 197/362 (54%), Gaps = 3/362 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC---YAKDWNEA 153
           PN +T+ T+I+GLCK G ++KA +++  MK     PNVVTY ++I G+C         +A
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKA 287

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             +  EM++  V PN VTFNV++D  CK+  +  A ++ + M   G++P   TYN+L++G
Sbjct: 288 DAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNG 347

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C  G++N AK L   M S   K  V +Y+ LINGYCK K +E A  L+  +  +G+ P+
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           V+  NTL  G  +  ++E AF L   M   G   +  TY   I G C+ G + E   L +
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            ++    + D   YN LI   C+    + A  L   +    L P+ +TY+I++ G C +G
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            +  A +L   ME+     NV+T+++LI+G+ R  +      LL++M E  ++P+ +   
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587

Query: 454 IV 455
           I+
Sbjct: 588 II 589



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 194/363 (53%), Gaps = 8/363 (2%)

Query: 103 TTIIDGLCKEGFVDKAK-----ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
            +II  +    +V+ +K     E   +  D   K +V++   ++       ++   + ++
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVY 218

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM+ + + PN++TFN +++ LCK GK+++A  ++D M   G  P+  TYNTL+DG+C  
Sbjct: 219 KEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKM 278

Query: 218 GRVN---HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           GRV     A  +   M          ++++LI+G+CK++ +  AL ++ EM S+G+KP V
Sbjct: 279 GRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTV 338

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +N+L  GL    ++  A  L DEM  + +  +  TY   I+G CK   + EA ELF  
Sbjct: 339 VTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDN 398

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +       ++  +N+L+ G CK G++E A  L + +     +PN  TY+ +I G C +G+
Sbjct: 399 IGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGK 458

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           M++ ++L  +M+   V  + +T+++LI  +    EP K   L+ +M +  + P     +I
Sbjct: 459 MEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNI 518

Query: 455 VVD 457
           +++
Sbjct: 519 LLN 521



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 149/316 (47%), Gaps = 15/316 (4%)

Query: 159 EMMDQG-VQPNVVT--FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           ++M  G V P +V   FN    EL  N  ++   RLL+L+      P      ++LD F 
Sbjct: 78  QLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKI---RSILDSF- 133

Query: 216 LTGRVNHAKELFVSMESMG----CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           + G  N +  L     S+     C +++ +  +L+  Y +N +    L  +        K
Sbjct: 134 VKGETNCSISLIFHSLSVCSGQFCANSIIA-DMLVLAYVENSKTVLGLEAFKRAGDYRYK 192

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
             V+  N L   L + ++      ++ EM R  ++ +  T+ T I+GLCK G + +A ++
Sbjct: 193 LSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDV 252

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGR---LEIALELFRSLPCGVLVPNVVTYSIMIGG 388
              +++     ++  YN+LIDG CK GR   +  A  + + +    + PN VT++++I G
Sbjct: 253 VDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDG 312

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            C D  +  A  +F +M+   + P V+T++ L+ G     + ++   LL +M   N+ P+
Sbjct: 313 FCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPN 372

Query: 449 ASIVSIVVDLLAKNEI 464
               + +++   K ++
Sbjct: 373 VITYNALINGYCKKKL 388


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 209/406 (51%), Gaps = 6/406 (1%)

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           + T+  ++N LCR      A +    M      +GV  +PN VTY T+I+G C  G  + 
Sbjct: 217 IVTFNIMINILCREGKWKKAKDFIGHME----VYGV--KPNVVTYNTVINGYCLRGKFEA 270

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A ++   MKDKN+KP+  TY S I   C  +   EA  +  ++++ G+ PN VT+N ++D
Sbjct: 271 ASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALID 330

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
             C  G +D+A    D M+  G+    FTYN L+    L  R+  A+++   M   G + 
Sbjct: 331 GCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEP 390

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            V +Y+I INGYC+    + ALSL+ EM+ K I+P V  + +L     + +++  A + F
Sbjct: 391 DVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKF 450

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            +  + G+  D   +   IDG C NG I  A +L   +   K   D   +N+L+ G C+ 
Sbjct: 451 KKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRE 510

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
            ++E A +L   +    + P+ ++Y+ +I G    G M  A ++F +M      P ++T+
Sbjct: 511 RKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTY 570

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + LI+G+ +I E     ELL +M+   + PD S    V++ +  N+
Sbjct: 571 NALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTND 616



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 213/420 (50%), Gaps = 6/420 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           +   + V   ++K       VTF  +I  LC E +  +A      + V+G +P+V TY T
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           ++NG C       A  +F+ M + N       +P+  TY + I  LCKE  +++A  +L 
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKN------LKPDCYTYNSFISRLCKERRIEEASGVLC 311

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           ++ +  + PN VTY ++I G C   D ++A     EMM++G+  +V T+N+++  L    
Sbjct: 312 KLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK 371

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           +++EA  ++  M + GV PD  TYN  ++G+C  G    A  LF  M     + TV +Y+
Sbjct: 372 RIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+ + K   +  A   + + + +G+ PD+++ N L  G      ++RAF+L  EM   
Sbjct: 432 SLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNA 491

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
            V  D  T+ T + G C+   + EA +L   ++    + D  +YN+LI G  K G ++ A
Sbjct: 492 KVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDA 551

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           LE+F  +      P ++TY+ +I G    G+ D A +L  +M+   + P+  T+  +I  
Sbjct: 552 LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/325 (35%), Positives = 177/325 (54%), Gaps = 6/325 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     VL ++L+S   P+AVT+ +LI G C +  + +A A   ++   G    VFTY 
Sbjct: 302 RIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYN 361

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++ L        A ++ +EM     E GV  EP+ VTY   I+G C+ G   KA  L 
Sbjct: 362 LLIHALFLEKRIEEAEDMIKEMR----EKGV--EPDVVTYNIQINGYCRCGNAKKALSLF 415

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +KNI+P V TYTS+I  F      +EA+  F + + +G+ P+++ FN ++D  C N
Sbjct: 416 DEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVN 475

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +D A +LL  M    V PD  T+NTL+ G+C   +V  AK+L   M+  G K    SY
Sbjct: 476 GNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISY 535

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GY K  +++ AL ++ EMLS G  P ++ +N L  G  +I + + A +L  EMQ 
Sbjct: 536 NTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQS 595

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVE 327
            G+  D  TY   I+ +  N  +VE
Sbjct: 596 KGITPDDSTYLYVIEAMKTNDDLVE 620



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 190/411 (46%), Gaps = 38/411 (9%)

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK---- 128
           HT     +F E++       V     T+ +  ++   C+    D+A E L  MK+     
Sbjct: 124 HTTTPTVIFNELSLARNRLNV---KTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIP 180

Query: 129 -------------------------------NIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
                                          NIK ++VT+  +I   C    W +AK   
Sbjct: 181 KTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFI 240

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M   GV+PNVVT+N +++  C  GK + AS++   M    ++PD +TYN+ +   C  
Sbjct: 241 GHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKE 300

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
            R+  A  +   +   G      +Y+ LI+G C   +++ A +   EM+++GI   V  +
Sbjct: 301 RRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTY 360

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N L   LF   ++E A  +  EM+  GV  D  TY   I+G C+ G   +A+ LF  +  
Sbjct: 361 NLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVE 420

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                 +  Y SLID   K  R+  A E F+      ++P+++ ++ +I G C +G +D+
Sbjct: 421 KNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDR 480

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           A  L  +M+   VVP+ +TF+ L++G+ R  +  +  +LL +MKE  + PD
Sbjct: 481 AFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPD 531



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 159/338 (47%), Gaps = 1/338 (0%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           EL L     N+K  +V +  ++  +C  +  +EA      M +  + P   T N ++  L
Sbjct: 134 ELSLARNRLNVKTTLV-FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLL 192

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K  K+  A  + + M++  ++    T+N +++  C  G+   AK+    ME  G K  V
Sbjct: 193 LKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNV 252

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +INGYC   + E A  ++  M  K +KPD   +N+    L +  ++E A  +  +
Sbjct: 253 VTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCK 312

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           +  +G+  +  TY   IDG C  G + +A      +        +  YN LI  L    R
Sbjct: 313 LLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKR 372

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +E A ++ + +    + P+VVTY+I I G C  G   KA  LF +M E  + P V T+  
Sbjct: 373 IEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTS 432

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           LI  F + N  S+  E   K  +  ++PD  + + ++D
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALID 470



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 6/142 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  +  +   PD VTF +L++G C E ++ EA  L  +++  G +PD  +Y
Sbjct: 476 GNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISY 535

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G  +      AL +F+EM        +  +P  +TY  +I G  K G  D A+EL
Sbjct: 536 NTLISGYSKRGDMKDALEVFDEM------LSLGFDPTLLTYNALIQGYSKIGEADHAEEL 589

Query: 122 LLQMKDKNIKPNVVTYTSVIRG 143
           L +M+ K I P+  TY  VI  
Sbjct: 590 LREMQSKGITPDDSTYLYVIEA 611


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 219/454 (48%), Gaps = 13/454 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC---EPDVFTYTTLVNGLCRTSHTIVAL 78
           D   F S++  L     +   A ++  ++  GC    PDV TY  LVNGLC+      AL
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQ--GCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVT 136
            + + M+  + +      P+ VT  T++DGLCK G V +A   + Q         PN VT
Sbjct: 193 RVLDGMSRQDLDI----RPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVT 248

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL--DL 194
           Y  +I  FC   + + A  L  +M ++GV  N+VT N I+  LC+ G+   A        
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKR 308

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
            +    + +A TY+TL+     T  V  A ELF    S G       Y  +I+G  +   
Sbjct: 309 TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +E A S+ S M   G K D   +N L  G     ++  A++L  EM+  G+  D  TY T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            + G CK G      EL   +    C+  +  + +L+ G CK G+++ AL + RS+    
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + PN V Y+ +I  LC  G +D A +LF +M+E +V  NV TF+ L++G    N P K  
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAF 548

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           EL+ +M+E    PD   V ++++ L   E+  N+
Sbjct: 549 ELMDQMREERCFPDYVTVDVLMEWLPVIELQGNN 582



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 6/216 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PDA+ + ++I GL    R+ +A ++ + ++  G + D   Y  L+ G CR      A  
Sbjct: 350 SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYE 409

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +EM     E G+   P+  TY T++ G CK G      ELL +M D   +P+V+T+ +
Sbjct: 410 LLQEMK----EVGI--RPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGT 463

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G+C     +EA R+   M + G+ PN V +N ++D LCK G +D A  L D M +  
Sbjct: 464 LVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKS 523

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           V  +  T+N LL G         A EL   M    C
Sbjct: 524 VPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 6/211 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +   + ++ F  D   +  LI G C + R+ EA  L  +++  G  PDV TY
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+         L  +M +        C+P+ +T+ T++ G CK G +D+A  +
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDG------CQPSVITFGTLVHGYCKVGKIDEALRI 480

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +  I PN V Y ++I   C   D + A  LF EM ++ V  NV TFN ++  L  
Sbjct: 481 LRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
               ++A  L+D M +    PD  T + L++
Sbjct: 541 KNMPEKAFELMDQMREERCFPDYVTVDVLME 571


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 228/449 (50%), Gaps = 7/449 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP-DVFT 60
           GR +      G +  +   PD   +   ++   A   + EA  +  ++   G  P + F+
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  ++ G+ R      A+ +F+EM     E  V+  PN +TY T+IDG  K G ++    
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMT----ERAVL--PNHITYNTMIDGHIKGGDLEAGFS 252

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  QM    +KPN +TY  ++ G C A    E   L  EM  Q + P+  T++++ D L 
Sbjct: 253 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 312

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +NG       L    +++GV    +T + LL+G C  G+V+ A+E+  S+ + G   T  
Sbjct: 313 RNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 372

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ LINGYC+  E+EGA S + +M S+ IKPD + +N L  GL +  ++  A  L  EM
Sbjct: 373 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 432

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           Q NGV     T+ T ID   + G + +   +   ++    + ++ +Y S+++  CK+G++
Sbjct: 433 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 492

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A+ +   +    ++PN   Y+ +I      G  D+A  L   M+ N + P+++T+++L
Sbjct: 493 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 552

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDA 449
           I+G    ++ S+  E+++ +    ++PDA
Sbjct: 553 IKGLCNQSQISEAEEIINSLSNHRLIPDA 581



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 230/442 (52%), Gaps = 12/442 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +  +++     P+A+T+  L+ GLC   R+ E +AL  ++      PD FTY
Sbjct: 245 GDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 304

Query: 62  TTLVNGLCRTSHTIVALNLF-EEMANGN--GEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           + L +GL R   +   L+LF + + NG   G++         T + +++GLCK+G V  A
Sbjct: 305 SILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDY---------TCSILLNGLCKDGKVSIA 355

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
           +E+L  + +  + P  V Y ++I G+C   +   A   F +M  + ++P+ +T+N +++ 
Sbjct: 356 EEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 415

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK  ++  A  LL  M  +GV P   T+NTL+D +  TG++     +   M+  G K  
Sbjct: 416 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 475

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V SY  ++N +CKN +I  A+++  +M  K + P+  ++N +     E    ++AF L +
Sbjct: 476 VVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVE 535

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M+ NG++    TY   I GLC    I EA E+ ++L   +   D  +YN+LI   C  G
Sbjct: 536 KMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRG 595

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            ++ AL+L + +    +   V TY  +I GL   G++ +   L+  M +N VVP+    +
Sbjct: 596 NIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHN 655

Query: 419 MLIRGFIRINEPSKVIELLHKM 440
           +++  + +     K  +L  +M
Sbjct: 656 IMVEAYSKYGNEIKAEDLRKEM 677



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 185/372 (49%), Gaps = 5/372 (1%)

Query: 91  FGVVC----EPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRGFC 145
           FG++      P+T  +   +      G + +A  +L +M +D    PN  +Y  VI G  
Sbjct: 148 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 207

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            A    +A  +F EM ++ V PN +T+N ++D   K G ++    L D M+ HG++P+A 
Sbjct: 208 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAI 267

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN LL G C  GR+     L   M S       F+YSIL +G  +N + +  LSL+ + 
Sbjct: 268 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKS 327

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L  G+       + L  GL +  +V  A ++   +   G+      Y T I+G C+ G +
Sbjct: 328 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 387

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A   F  ++    + D   YN+LI+GLCK+ R+  A +L   +    + P V T++ +
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 447

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I      GQ++K   +  +M+EN + PNV+++  ++  F +  +  + + +L  M   +V
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507

Query: 446 MPDASIVSIVVD 457
           +P+A + + ++D
Sbjct: 508 LPNAQVYNAIID 519



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 164/333 (49%), Gaps = 1/333 (0%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP-NVVTFNVIMDELCKNGKMDEAS 189
           +P+   +   ++    A D  EA  +   M   G  P N  ++NV++  + + G+  +A 
Sbjct: 157 RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 216

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            + D M +  V P+  TYNT++DG    G +     L   M   G K    +Y++L++G 
Sbjct: 217 EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGL 276

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C+   +    +L  EM S+ + PD   ++ LF GL      +    LF +  +NGV    
Sbjct: 277 CRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGD 336

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
           +T    ++GLCK+G +  A E+  +L           YN+LI+G C++G LE A   F  
Sbjct: 337 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 396

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P+ +TY+ +I GLC   ++  A+DL ++M++N V P V TF+ LI  + R  +
Sbjct: 397 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 456

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             K   +L +M+E  + P+      +V+   KN
Sbjct: 457 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN 489



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 5/315 (1%)

Query: 153 AKRLFIEMMDQGVQP--NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           A RL  ++ D+   P  ++ + N++++ L   G+  +  R   ++   G RPD F +N  
Sbjct: 107 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 166

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKH-TVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           +      G +  A  +   M   G      FSY+++I G  +      A+ ++ EM  + 
Sbjct: 167 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 226

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           + P+ + +NT+  G  +   +E  F L D+M  +G+  +  TY   + GLC+ G + E  
Sbjct: 227 VLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 286

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGG 388
            L   +   K   D   Y+ L DGL ++G  +  L LF +SL  GV + +  T SI++ G
Sbjct: 287 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDY-TCSILLNG 345

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC DG++  A ++   +    +VP  + ++ LI G+ +  E         +MK  ++ PD
Sbjct: 346 LCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPD 405

Query: 449 ASIVSIVVDLLAKNE 463
               + +++ L K E
Sbjct: 406 HITYNALINGLCKAE 420



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 41/231 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAA----------------- 44
           G++   F+VL  + ++   P+ V++ S++   C   +I EA A                 
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 514

Query: 45  ------------------LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
                             L  K++  G  P + TY  L+ GLC  S    A    EE+ N
Sbjct: 515 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA----EEIIN 570

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                 ++  P+ V+Y T+I   C  G +DKA +L  +M    IK  V TY  +I G   
Sbjct: 571 SLSNHRLI--PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 628

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           A    E + L+ +MM   V P+    N++++   K G   +A  L   M+Q
Sbjct: 629 AGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 679


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 232/477 (48%), Gaps = 53/477 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC---RTSHTIVA 77
           P   TF+ +I G C +  I    +L   +  F CEP+ F Y  ++N  C   RTS  +  
Sbjct: 264 PCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAW 323

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
            NL  E           C P  VT+ T+I+  CKEG V +A++L   +K+    PN + Y
Sbjct: 324 FNLMIERG---------CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            +++ G+   ++ ++A  L+ EM  +G+ P+ +TFN+++    K G+ ++  RLL  +  
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK------ 251
            G+ PD   ++  + G C  GR++ A E  + M   G   ++ +++ +I  Y +      
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494

Query: 252 -----------------------------NKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
                                        N  ++ A  L  +M+ KG+  + +    L  
Sbjct: 495 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 554

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTLR--ILK 339
             F+   V  A  L+ EM+R G+  D   +  FIDGL K G + EA  +F   LR  ++ 
Sbjct: 555 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIP 614

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
             F   AYNSLI G CK G+L  AL+L + +    L+P++ T +++IGGLC  G+M  A 
Sbjct: 615 NNF---AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAI 671

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           ++F+DM +  + P++IT++ LI G+ +  +      L+++M      PD +  +I +
Sbjct: 672 NVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRI 728



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 222/447 (49%), Gaps = 6/447 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S        +++    P  VTF ++I   C E  ++EA  LF  L+  G  P+   Y
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG  +      A  L+EEM       G+   P+ +T+  ++ G  K G  +    L
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKK----GIA--PDGITFNILVSGHYKYGREEDGDRL 428

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  +    + P+   +   + G C+A   +EA    ++M+++G+ P+++ FN ++    +
Sbjct: 429 LKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQ 488

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G  D+A     LM+  G+ P   T ++LL G  + GR+  A EL   M   G      +
Sbjct: 489 AGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMA 548

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++L++ + K  ++ GA SL+ EM  +GI PDVV  +    GL +   VE A+ +F EM 
Sbjct: 549 FTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEML 608

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G+  + + Y + I G CK G + EA++L   +R      DI   N +I GLCK GR+ 
Sbjct: 609 RKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMR 668

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A+ +F  +    L P+++TY+ +I G C    M  A +L   M  +   P++ T+++ I
Sbjct: 669 SAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRI 728

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
            GF      ++ + +L ++    ++P+
Sbjct: 729 HGFCSSRRMNRAVLMLDELVSAGIVPN 755



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 208/453 (45%), Gaps = 6/453 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +LGR+ +    P A     L K L           LF  +   G +P  +T++ ++ G C
Sbjct: 218 ILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFC 277

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R     +  +L   M   +      CEPN   Y  +I+  C  G    A      M ++ 
Sbjct: 278 RKGCIHLGESLLHLMPKFH------CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG 331

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P VVT+ +VI  FC   +  EA++LF  + + G  PN + +N +M+   K  ++D+A+
Sbjct: 332 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 391

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L + M + G+ PD  T+N L+ G    GR      L   +  +G       + I ++G 
Sbjct: 392 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 451

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           C    ++ A+    +ML KG+ P ++  N++     +    ++AF+ +  M   G+    
Sbjct: 452 CWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 511

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            T  + + GL  NG + EA EL   +       +  A+  L+D   K G +  A  L+  
Sbjct: 512 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 571

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + P+VV +S  I GL   G +++A ++FL+M    ++PN   ++ LI GF +  +
Sbjct: 572 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            ++ ++L   M+   ++PD    ++++  L K 
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQ 664



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 178/363 (49%), Gaps = 6/363 (1%)

Query: 104 TIIDGLCKEGFVD-----KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
           +++D L +  FV+     +A E+L +M++  ++P+      + +      D+    +LF 
Sbjct: 197 SVLDSLMR-AFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFK 255

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           +++ +G QP   TF+ I+   C+ G +     LL LM +    P+AF YN +++  C+ G
Sbjct: 256 DVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRG 315

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           R + A   F  M   GC  TV +++ +IN +CK   +  A  L+  +   G  P+ +++N
Sbjct: 316 RTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYN 375

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           TL  G  ++ ++++A  L++EM++ G+A D  T+   + G  K G   +   L   + +L
Sbjct: 376 TLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVL 435

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
               D   ++  + GLC +GRL+ A+E    +    L P+++ ++ +I      G  DKA
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 495

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            + +  M    + P+  T   L+ G        +  EL+ +M E  +  +    ++++D 
Sbjct: 496 FEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDK 555

Query: 459 LAK 461
             K
Sbjct: 556 FFK 558



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 151/329 (45%), Gaps = 40/329 (12%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            TP   T +SL+ GL    R+ EA  L  ++   G   +   +T L++   +    + A 
Sbjct: 507 LTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQ 566

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L+ EM    G F     P+ V ++  IDGL K+G V++A  + L+M  K + PN   Y 
Sbjct: 567 SLWGEMER-RGIF-----PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYN 620

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I GFC     NEA +L   M  +G+ P++ T N+I+  LCK G+M  A  +   M Q 
Sbjct: 621 SLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQT 680

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  TYNTL++G+C    + +A  L   M + G    + +Y+I I+G+C ++ +  A
Sbjct: 681 GLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRA 740

Query: 259 LSLYSEMLSKGIKPD----------------------------------VVIHNTLFVGL 284
           + +  E++S GI P+                                  VV  N L    
Sbjct: 741 VLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARLLKMAFVPNVVTANLLLSQF 800

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           ++    ER      ++     A D  TY+
Sbjct: 801 YKQGMPERTLMWGHKLSEIPYAFDEITYK 829



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 153/324 (47%)

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S++R F  A+   +A  +   M + GV+P+     ++   L + G      +L   +I+ 
Sbjct: 201 SLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRR 260

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G +P  +T++ ++ GFC  G ++  + L   M    C+   F+Y+I+IN  C       A
Sbjct: 261 GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDA 320

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+ ++ M+ +G  P VV  NT+     +   V  A KLFD ++  G + +   Y T ++G
Sbjct: 321 LAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNG 380

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             K   I +A  L+  +R      D   +N L+ G  K GR E    L + +    L+P+
Sbjct: 381 YVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD 440

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
              + I + GLC  G++D+A +  +DM E  + P++I F+ +I  + +     K  E   
Sbjct: 441 RSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 500

Query: 439 KMKEINVMPDASIVSIVVDLLAKN 462
            M    + P  S  S ++  L+ N
Sbjct: 501 LMVHFGLTPSPSTCSSLLMGLSIN 524



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 110/263 (41%)

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
            H    D    ++L+  F        A E+   M  +G + +    +IL     +  +  
Sbjct: 189 HHVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYG 248

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
               L+ +++ +G +P     + + +G      +     L   M +     + + Y   I
Sbjct: 249 NVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVI 308

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +  C  G   +A+  F+ +    C   +  +N++I+  CK G +  A +LF  L      
Sbjct: 309 NACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFS 368

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN + Y+ ++ G     ++D+A  L+ +M +  + P+ ITF++L+ G  +         L
Sbjct: 369 PNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRL 428

Query: 437 LHKMKEINVMPDASIVSIVVDLL 459
           L  +  + ++PD S+  I V  L
Sbjct: 429 LKDISVLGLLPDRSLFDISVSGL 451


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 239/475 (50%), Gaps = 7/475 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +L +   PD+  +TS + G C    +  A  +F  + + GC    FTYT L++GL  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 A+ +F  M   +      C P+T  Y T++ GLC+ G  ++A+ LL +      
Sbjct: 155 AGMVREAMAVFVGMRADS------CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGF 208

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +PN+V Y ++I G+C A +   A ++F  M      PNV T+  ++  LCK+GK++ A  
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M++ G+ P+  TY  L+ G C  G +  A  L   ME+ G     +++S+LI+  C
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K +++E A      ++ KG+K + V++ +L  GL +  +++ A +L  +M   G   D  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           +Y + IDGLC+   + +A  +   +     +     Y  +ID L +    E   ++F  +
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               + P++VTY++ +   C +G+M+ A  + + M +  V PN++T++ LIRG+  +   
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESN 485
           S+       M      P+    ++++ L+ K   S NS+  + + + + ++ ESN
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK-DLQESN 562



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 230/462 (49%), Gaps = 15/462 (3%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           V +G    SC  PD   + +++ GLC   R  EA  L  +    G EP++  Y  L++G 
Sbjct: 164 VFVGMRADSC-APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGY 222

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C       AL +FE M +GN      C PN  TYT +I GLCK G V++A  L  +M + 
Sbjct: 223 CNAGEMEHALKVFEGM-DGNR-----CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            ++PNVVTYT++I+G C       A RL   M   G+ PN  TF+V++D LCK  K++EA
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
              L  +++ GV+ +   Y +L+DG C TG+++ A EL   M S G      SYS LI+G
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C+ K++  A  +  +M+ KGI+   V +  +   L      E   K+FD+M   G+  D
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY  F+   C+ G + +A  +   +       ++  YN+LI G    G +  A   F 
Sbjct: 457 IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFE 516

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF-----LDMEENAVVPNVITFDMLIRG 423
            +      PN  +Y++++  +      D + D++      D++E+    + I + +LI G
Sbjct: 517 VMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNY--DEIVWKILIYG 574

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVV-DLLAKNEI 464
            ++    ++   LL  MKE    P  +I +++  ++   NE+
Sbjct: 575 LLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEV 616



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 197/397 (49%), Gaps = 6/397 (1%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TYTTL+N  C       A      + +          P++  YT+ + G C+ G +  A 
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAG------LAPDSYAYTSFVLGYCRAGMLTHAC 127

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            + + M  +       TYT+++ G   A    EA  +F+ M      P+   +  ++  L
Sbjct: 128 RVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGL 187

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+ G+ +EA  LL+  + +G  P+   YN L+DG+C  G + HA ++F  M+   C   V
Sbjct: 188 CEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNV 247

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+G CK+ ++E A+ L+S M+  G++P+VV +  L  G      ++ AF+L   
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL 307

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+ NG+  + WT+   ID LCK   + EA     +L     + +   Y SLIDGLCK+G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A EL + +     VP+  +YS +I GLC   ++ +A  +  DM E  +  + +T+ +
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +I   +R        ++  KM    + PD    ++ V
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFV 464



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 209/430 (48%), Gaps = 10/430 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR     V+L   + + F P+ V + +LI G C    +  A  +F  +    C P+V TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GLC++     A+ LF  M     E G+  EPN VTYT +I G C EG +  A  L
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMV----EAGL--EPNVVTYTALIQGQCNEGHLQCAFRL 304

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+   + PN  T++ +I   C  +   EA+     ++ +GV+ N V +  ++D LCK
Sbjct: 305 LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCK 364

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+D A  L+  MI  G  PDA +Y++L+DG C   +++ A  +   M   G + +  +
Sbjct: 365 TGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+I+   +    EG   ++ +M++ GI PD+V +        E  ++E A  +  +M 
Sbjct: 425 YTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  +  TY T I G    G + +A   F  +     + +  +Y  L+  + K    +
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSD 544

Query: 362 IALELFRSLPCGVLVP---NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            ++++++      L     + + + I+I GL   G + +   L   M+E+   P+  T +
Sbjct: 545 NSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSN-TIN 603

Query: 419 MLIRGFIRIN 428
            +I G I + 
Sbjct: 604 AMITGEITVT 613



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 172/360 (47%), Gaps = 4/360 (1%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           T++  L +       + L  +M  +N++    TYT++I  +C A D   AK+    ++  
Sbjct: 46  TLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQHLTSLLHA 101

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G+ P+   +   +   C+ G +  A R+  LM   G    AFTY  LL G    G V  A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             +FV M +  C      Y+ +++G C+    E A  L  E +S G +P++V++N L  G
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                ++E A K+F+ M  N  + +  TY   I GLCK+G +  A+ LF  +     E +
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y +LI G C  G L+ A  L   +    LVPN  T+S++I  LC   ++++A+    
Sbjct: 282 VVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLG 341

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            + +  V  N + +  LI G  +  +     EL+ KM     +PDA   S ++D L + +
Sbjct: 342 SLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQK 401


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 241/450 (53%), Gaps = 21/450 (4%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           +SHG    GR +     P+  T+  +++ LCA   +  A  LF  LR     PD  TY+T
Sbjct: 145 LSHG--AFGRRI----APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYST 198

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+ GL +      AL+L +EM       GV  +P+ V Y  ++ G  K G  +K   +  
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRS----GV--QPDVVCYNALLGGCFKAGEFEKVMRVWD 252

Query: 124 QM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           ++ KD   +PN+ TY  ++ G C    + E   ++  M+   +QP+V+T+ +++  LC++
Sbjct: 253 KLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRS 312

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +D A+R+   +I+ G+  DA  YN+L+ GFC  GRV  A + + S    G ++ + +Y
Sbjct: 313 GDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRN-LRTY 371

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIK--PDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +I+I G   +  ++ A+ L+ ++L K +   PD V   TL  GL +     +AF +F+E 
Sbjct: 372 NIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEA 430

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           + +G   D ++Y + I+GLC  G +V+AV+++  +    C+ +   YN+LI G C+  R 
Sbjct: 431 RVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRT 490

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A+ ++  +      P V+TY+ +I GLC   +  +A  +  +M EN   P++ T+  L
Sbjct: 491 SDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSL 550

Query: 421 IRGFI---RINEPSKVI-ELLHKMKEINVM 446
           IRG     +I++   +  ++L+K  +++VM
Sbjct: 551 IRGLFSDKKIDDALSIWKQILYKGLKVDVM 580



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 223/427 (52%), Gaps = 9/427 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      V  R++ +   PD +T+  LI GLC    +  AA +++++   G   D   Y
Sbjct: 278 GRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +LV G C+      A   ++         G     N  TY  +I GL   G VD+A EL
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWDSA-------GFAGLRNLRTYNIMIKGLFDSGMVDEAIEL 390

Query: 122 L-LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
             L  KD    P+ VT+ ++I G C     N+A  +F E    G Q +V +++ +++ LC
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G++ +A ++ + M + G +P++  YN L+ GFC   R + A  ++  M   GC  TV 
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G CK ++ + A S+  EM+  G  PD+  + +L  GLF   +++ A  ++ ++
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGR 359
              G+  D   +   I GLC  G + EA+ +F  ++  K C  ++  YN+L+DGL ++G 
Sbjct: 571 LYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGY 630

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A  L+ S+    L P++++Y+  I GLC+  ++ +   L  ++    ++P VIT+++
Sbjct: 631 IDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNI 690

Query: 420 LIRGFIR 426
           L+R  I+
Sbjct: 691 LVRAVIK 697



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 225/437 (51%), Gaps = 9/437 (2%)

Query: 33  LCAESR-IMEAAAL--FTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L A SR IM  AAL  F  L  + GC P + ++  L++   R      A   F  +++G 
Sbjct: 90  LSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG- 148

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
             FG    PN  TY  ++  LC  G +D+A  L   ++ + + P+ +TY++++ G     
Sbjct: 149 -AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQD 207

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH-GVRPDAFTY 207
             + A  L  EM   GVQP+VV +N ++    K G+ ++  R+ D +++  G RP+  TY
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N +LDG C  GR     E++  M +   +  V +Y ILI+G C++ +++GA  +YSE++ 
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            G+  D  ++N+L  G  +  +V+ A+K +D     G+  +  TY   I GL  +G + E
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDE 386

Query: 328 AVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           A+EL+  L + + C  D   + +LI GLC++G    A  +F          +V +YS MI
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLCN G++  A  ++  M+++   PN   ++ LI GF ++   S  + +  KM +    
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 447 PDASIVSIVVDLLAKNE 463
           P     + ++D L K E
Sbjct: 507 PTVITYNTLIDGLCKAE 523



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 245/499 (49%), Gaps = 49/499 (9%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTY 61
           R+ H   +L  + +S   PD V + +L+ G        +   ++ KL +  G  P++ TY
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++GLC+         ++E M   N       +P+ +TY  +I GLC+ G VD A  +
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANN------LQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYA-------KDWNEA---------------KRLFIE 159
             ++    +  +   Y S+++GFC A       K W+ A               K LF  
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 160 -MMDQGVQ------------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
            M+D+ ++            P+ VTF  ++  LC+NG  ++A  + +     G + D F+
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y+++++G C  GR+  A +++  M+  GCK     Y+ LI+G+C+      A+ +YS+M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G  P V+ +NTL  GL +  + + A  +  EM  NG   D  TY + I GL  +  I 
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVLVPNVVTY 382
           +A+ ++  +     + D+  +N LI GLC +G+++ AL +F  +     C    PN+VTY
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP---PNLVTY 618

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++ GL   G +DKA  L+  + E+ + P++I+++  I+G    +   + I+LL ++  
Sbjct: 619 NTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678

Query: 443 INVMPDASIVSIVVDLLAK 461
             ++P     +I+V  + K
Sbjct: 679 RGIIPTVITWNILVRAVIK 697



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 203/395 (51%), Gaps = 7/395 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     V   I+K+    DA  + SL+KG C   R+ EA   +      G   ++ TY
Sbjct: 313 GDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTY 371

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ GL  +     A+ L++ +     E  V C P+TVT+ T+I GLC+ GF +KA  +
Sbjct: 372 NIMIKGLFDSGMVDEAIELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFANKAFTI 426

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + +    + +V +Y+S+I G C      +A +++ +M   G +PN   +N ++   C+
Sbjct: 427 FEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQ 486

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +  +A R+   M  +G  P   TYNTL+DG C   +   A  +   M   G    + +
Sbjct: 487 VYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITT 546

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM- 300
           Y  LI G   +K+I+ ALS++ ++L KG+K DV++HN L  GL    +V+ A  +F +M 
Sbjct: 547 YGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK 606

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           ++     +  TY T +DGL + GYI +A  L+ ++     E DI +YN+ I GLC   R+
Sbjct: 607 EKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRI 666

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
              ++L   +    ++P V+T++I++  +   G +
Sbjct: 667 HEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 42/271 (15%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +++S+I GLC   R+++A  ++ K+   GC+P+   Y  L++G C+   T  A+ ++
Sbjct: 438 DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIY 497

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +MA+ NG     C P  +TY T+IDGLCK     +A  +  +M +    P++ TY S+I
Sbjct: 498 SKMAD-NG-----CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLI 551

Query: 142 RGF-----------------------------------CYAKDWNEAKRLFIEMMDQ-GV 165
           RG                                    C A   +EA  +F +M ++   
Sbjct: 552 RGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNC 611

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN+VT+N +MD L + G +D+A+ L   + + G+ PD  +YNT + G C   R++   +
Sbjct: 612 PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQ 671

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           L   + S G   TV +++IL+    K   I+
Sbjct: 672 LLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 247/510 (48%), Gaps = 56/510 (10%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+     +   +++    P+ VT+ +LI G C    I EA     +++    E ++ TY 
Sbjct: 207 RIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYN 266

Query: 63  TLVNGLCRTSHTIVALNL------------------FEEMANGNGEFGVV----CEPNTV 100
           +L+NGLC +     A  +                  F++ +NG G+ G+        +  
Sbjct: 267 SLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDER 326

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  +++GLC+ G ++KA+E+L ++ +  + P+ ++Y  ++  +C   D  +A     +M
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            ++G++PN +TFN ++ + C+ G++D A   +  M++ GV P   TYN+L++G+   G  
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
               E    M+  G K  V SY  LIN  CK++++  A  + ++M+ +G+ P+  I+N L
Sbjct: 447 VRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNML 506

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
                 + +++ AF+ FDEM ++G+ A   TY T I+GL +NG + +A +LF  +    C
Sbjct: 507 IEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPC--------------------GV------ 374
             D+  YNSLI G  KS   +  LEL+  +                      GV      
Sbjct: 567 NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKM 626

Query: 375 --------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
                   LVP+   Y+ MI     DG + KA  L   M +  V  + +T++ LI  ++R
Sbjct: 627 FQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLR 686

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVV 456
               S++  L+  MK   ++P     +I++
Sbjct: 687 DRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 228/468 (48%), Gaps = 34/468 (7%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
             V   ++ S   PDAV +   ++       + +   L   +   G  P VF Y  ++ G
Sbjct: 142 LAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGG 201

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           LC+      A  LF+EM   N        PNTVTY T+IDG CK G +++A     +MK+
Sbjct: 202 LCKVRRIKDARKLFDEMIQRN------MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKE 255

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP-------------------- 167
           +N++ N+VTY S++ G C +   ++A+ + +EM   G  P                    
Sbjct: 256 QNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGL 315

Query: 168 --------NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
                   +  T+ ++++ LC+ G++++A  +L  ++++GV P   +YN L++ +C  G 
Sbjct: 316 FDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGD 375

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           V  A      ME  G +    +++ +I+ +C+  E++ A +    M+ KG+ P V  +N+
Sbjct: 376 VKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNS 435

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G  +     R F+  DEM + G+  +  +Y + I+ LCK+  +++A  +   +    
Sbjct: 436 LINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRG 495

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              +   YN LI+  C   +L+ A   F  +    +   +VTY+ +I GL  +G++ KA 
Sbjct: 496 VSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAE 555

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           DLFL M      P+VIT++ LI G+ +     K +EL  KMK + + P
Sbjct: 556 DLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKP 603



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 207/424 (48%), Gaps = 7/424 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+     VL +++++  TP  +++  L+   C E  + +A     ++   G EP+  T
Sbjct: 338 VGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRIT 397

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + T+++  C T     A      M     E GV   P   TY ++I+G  ++G   +  E
Sbjct: 398 FNTVISKFCETGEVDHAETWVRRMV----EKGV--SPTVETYNSLINGYGQKGHFVRCFE 451

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +M    IKPNV++Y S+I   C  +   +A+ +  +M+ +GV PN   +N++++  C
Sbjct: 452 FLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASC 511

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
              K+ +A R  D MIQ G+     TYNTL++G    GRV  A++LF+ M   GC   V 
Sbjct: 512 SLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVI 571

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+GY K+   +  L LY +M   GIKP V   + L     +   V    K+F EM
Sbjct: 572 TYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRK-EGVVTMDKMFQEM 630

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +  +  D + Y   I    ++G +++A+ L   +     + D   YNSLI    +  R+
Sbjct: 631 LQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRV 690

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
                L   +    LVP V TY+I+I GLC+    + A   + +M E  ++ NV     L
Sbjct: 691 SEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQL 750

Query: 421 IRGF 424
           I G 
Sbjct: 751 ISGL 754



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 213/430 (49%), Gaps = 7/430 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T+  L+ GLC   RI +A  +  KL   G  P   +Y  LVN  C+      A+   
Sbjct: 324 DERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTT 383

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           E+M     E G+  EPN +T+ T+I   C+ G VD A+  + +M +K + P V TY S+I
Sbjct: 384 EQME----ERGL--EPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLI 437

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+     +        EM   G++PNV+++  +++ LCK+ K+ +A  +L  MI  GV 
Sbjct: 438 NGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVS 497

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+A  YN L++  C   ++  A   F  M   G   T+ +Y+ LING  +N  ++ A  L
Sbjct: 498 PNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDL 557

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +M  KG  PDV+ +N+L  G  +    ++  +L+D+M+  G+     T+   I   C+
Sbjct: 558 FLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CR 616

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
              +V   ++F  +  +    D   YN +I    + G +  A+ L + +    +  + VT
Sbjct: 617 KEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVT 676

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ +I     D ++ + + L  DM+   +VP V T+++LI+G   + + +       +M 
Sbjct: 677 YNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMV 736

Query: 442 EINVMPDASI 451
           E  ++ + S+
Sbjct: 737 ERGLLLNVSM 746



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 9/368 (2%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+T +   ++  L      +K   +   + D   +P+ V Y   ++     KD ++   L
Sbjct: 120 PSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFEL 179

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M+  G+ P+V  +N+++  LCK  ++ +A +L D MIQ  + P+  TYNTL+DG+C 
Sbjct: 180 MKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCK 239

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G +  A      M+    +  + +Y+ L+NG C +  ++ A  +  EM   G  P   +
Sbjct: 240 VGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFL 299

Query: 277 HNTLFVGLFEIHQVERAFK-LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
               FV  F+ H        LFD  +   +  D  TY   ++GLC+ G I +A E+   L
Sbjct: 300 S---FV--FDDHSNGAGDDGLFDGKE---IRIDERTYCILLNGLCRVGRIEKAEEVLAKL 351

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                     +YN L++  C+ G ++ A+     +    L PN +T++ +I   C  G++
Sbjct: 352 VENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEV 411

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           D A      M E  V P V T++ LI G+ +     +  E L +M +  + P+      +
Sbjct: 412 DHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSL 471

Query: 456 VDLLAKNE 463
           ++ L K+ 
Sbjct: 472 INCLCKDR 479



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 151/321 (47%), Gaps = 7/321 (2%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F  L  + K+   P+ +++ SLI  LC + ++++A  +   +   G  P+   Y  L+  
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
            C  S    A   F+EM           +   VTY T+I+GL + G V KA++L LQM  
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSG------IDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           K   P+V+TY S+I G+  + +  +   L+ +M   G++P V TF+ ++   C+   +  
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI-YACRKEGVVT 622

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
             ++   M+Q  + PD F YN ++  +   G V  A  L   M   G      +Y+ LI 
Sbjct: 623 MDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLIL 682

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
            Y +++ +     L  +M +KG+ P V  +N L  GL ++     A+  + EM   G+  
Sbjct: 683 AYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLL 742

Query: 308 DTWTYRTFIDGLCKNGYIVEA 328
           +       I GL + G + EA
Sbjct: 743 NVSMCYQLISGLREEGMLREA 763



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 159/333 (47%), Gaps = 7/333 (2%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D+A +L   M+     P+  +   ++R    ++ + +   +F +++D G +P+ V +  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
            +        +D+   L+  M++ G+ P  F YN +L G C   R+  A++LF  M    
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                 +Y+ LI+GYCK   IE AL     M  + ++ ++V +N+L  GL    +V+ A 
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           ++  EM+ +G     +    F D    NG   + +     +RI     D R Y  L++GL
Sbjct: 283 EVLLEMEGSGFLPGGFLSFVFDDH--SNGAGDDGLFDGKEIRI-----DERTYCILLNGL 335

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C+ GR+E A E+   L    + P+ ++Y+I++   C +G + KA      MEE  + PN 
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNR 395

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           ITF+ +I  F    E       + +M E  V P
Sbjct: 396 ITFNTVISKFCETGEVDHAETWVRRMVEKGVSP 428



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 145/297 (48%), Gaps = 7/297 (2%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           +VL  ++    +P+A  +  LI+  C+ S++ +A   F ++   G +  + TY TL+NGL
Sbjct: 486 IVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGL 545

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
            R      A +LF +MA      G  C P+ +TY ++I G  K     K  EL  +MK  
Sbjct: 546 GRNGRVKKAEDLFLQMA------GKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKIL 599

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            IKP V T+  +I   C  +      ++F EM+   + P+   +N ++    ++G + +A
Sbjct: 600 GIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKA 658

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L   M+  GV  D  TYN+L+  +    RV+  K L   M++ G    V +Y+ILI G
Sbjct: 659 MSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKG 718

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
            C  K+  GA   Y EM+ +G+  +V +   L  GL E   +  A  +  E+   G+
Sbjct: 719 LCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGL 775


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 237/488 (48%), Gaps = 35/488 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+    + V+  ++ + F PD  T++ +I  LC  SR+  A  LF +++  G  PDV+TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++   +      A N  +EM          CEP  VTYTT+I    K   V  A EL
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDG------CEPTVVTYTTLIHAYLKAKKVSVANEL 581

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM----------------DQGV 165
              M  K   PNV+TYT++I G+C + +  +A +++  M                 +   
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +PNVVT+  ++D LCK  K+ +A  LL+ M   G  P+   Y+ L+DGFC   +++ A+E
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F  M   G    V++YS LI+   K+K ++  L + S+ML     P++VI+  +  GL 
Sbjct: 702 VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           ++ + + A+KL   M+  G   +  TY   IDG  K G + + +ELF  +    C  +  
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y  LI+  C +G L+ A  L   +       +V +Y  +I G   +  +  +  L  ++
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEV 879

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           E+N   P ++ + +LI  F++       +E LHK           ++S  + + AK  + 
Sbjct: 880 EKNGSAPTILLYKVLIDNFVKAGRLEVALE-LHK----------EVISASMSMTAKKNLY 928

Query: 466 LNSLPSFT 473
            + + SF+
Sbjct: 929 TSLIYSFS 936



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 232/457 (50%), Gaps = 16/457 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +      L  +++    P  VT+T+LI       ++  A  LF  +   GC P+V TY
Sbjct: 538 GIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEF-----------GVVCEPNTVTYTTIIDGLC 110
           T L++G C++ +   A  ++  M  G+ +             V  +PN VTY  ++DGLC
Sbjct: 598 TALIDGYCKSGNIEKACQIYARM-RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLC 656

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K   V  A++LL  M     +PN + Y ++I GFC A   +EA+ +F +M+++G  PNV 
Sbjct: 657 KAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVY 716

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T++ ++D L K+ ++D   ++L  M+++   P+   Y  ++DG     + + A +L + M
Sbjct: 717 TYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMM 776

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
           E  GCK  V +Y+ +I+G+ K  +++  L L+ EM SKG  P+ V +  L         +
Sbjct: 777 EEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHL 836

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           + A+ L +EM++        +Y   I+G  K  +I+ ++ L   +        I  Y  L
Sbjct: 837 DEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFIL-SLGLLEEVEKNGSAPTILLYKVL 894

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVT--YSIMIGGLCNDGQMDKARDLFLDMEEN 408
           ID   K+GRLE+ALEL + +    +        Y+ +I       ++D A +LF DM  +
Sbjct: 895 IDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRD 954

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
            V+P++ TF  L+ G IR+    + ++L   + ++++
Sbjct: 955 GVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 214/462 (46%), Gaps = 21/462 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I + C+ P    F SL+   C       A  L  K+    C+P    Y  L+  +C    
Sbjct: 370 IAEGCY-PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 428

Query: 74  T--IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
               V   L E+  N     G V   N V   +    LC  G  +KA +++ +M      
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVL--NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFV 486

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+  TY+ VI   C A     A  LF EM   GV P+V T+ +++D   K G + +A   
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           LD M++ G  P   TY TL+  +    +V+ A ELF  M + GC   V +Y+ LI+GYCK
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606

Query: 252 NKEIEGALSLYSEMLSKGI----------------KPDVVIHNTLFVGLFEIHQVERAFK 295
           +  IE A  +Y+ M                     KP+VV +  L  GL + H+V+ A  
Sbjct: 607 SGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARD 666

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L + M  +G   +T  Y   IDG CK   + EA E+FH +       ++  Y+SLID L 
Sbjct: 667 LLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLF 726

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K  RL++ L++   +      PN+V Y+ MI GL    + D+A  L L MEE    PNV+
Sbjct: 727 KDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVV 786

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           T+  +I GF +  +  K +EL  +M      P+    +++++
Sbjct: 787 TYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 220/474 (46%), Gaps = 28/474 (5%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
            L  I K  F P+ + +  +I GLC  S   EA     ++R   C P+V TY  L+ G C
Sbjct: 295 ALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG-C 353

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                +        M    G     C P+   + +++   CK      A +LL +M+   
Sbjct: 354 LNKKQLGRCKRILSMMIAEG-----CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE 408

Query: 130 IKPNVVTYTSVIRGFCYAKD------WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            KP  V Y  +I   C   +      +  A++ + EM+  G   N V        LC  G
Sbjct: 409 CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFG 468

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K ++A +++  M+ +G  PD  TY+ ++   C   RV +A  LF  M+  G    V++Y+
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           ILI+ + K   I+ A +   EM+  G +P VV + TL     +  +V  A +LF+ M   
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR------ILKCEFDIR----------AY 347
           G   +  TY   IDG CK+G I +A +++  +R       +   F I+           Y
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +L+DGLCK+ +++ A +L  ++      PN + Y  +I G C   ++D+A+++F  M E
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               PNV T+  LI    +      V+++L KM E +  P+  I + ++D L+K
Sbjct: 709 RGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 219/513 (42%), Gaps = 72/513 (14%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LGR+    + P  +T+ +L++      ++  A  +  ++   G   D FT       LC+
Sbjct: 229 LGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCK 288

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 AL+L E+      +F     PNT+ Y  +I GLC+  F ++A + L +M+  + 
Sbjct: 289 VGKWREALSLIEK-----EDF----VPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSC 339

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PNV TY  ++ G    K     KR+   M+ +G  P+   FN ++   CK+     A +
Sbjct: 340 IPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYK 399

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRV------NHAKELFVSMESMGC---KHTVFS 241
           LL  M +   +P    YN L+   C  G +        A++ +  M S G    K  V S
Sbjct: 400 LLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVS 459

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++  + G+ K    E A  +  EM+  G  PD   ++ +   L    +VE AF LF EM+
Sbjct: 460 FARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMK 516

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAV-------------------------------- 329
             GV  D +TY   ID   K G I +A                                 
Sbjct: 517 GTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS 576

Query: 330 ---ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP--------- 377
              ELF  +    C  ++  Y +LIDG CKSG +E A +++  +     +P         
Sbjct: 577 VANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636

Query: 378 -------NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                  NVVTY  ++ GLC   ++  ARDL   M  +   PN I +D LI GF +  + 
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +  E+ HKM E    P+    S ++D L K++
Sbjct: 697 DEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDK 729



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 123/297 (41%), Gaps = 15/297 (5%)

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
            NV++ + C+NG  + A   L  +   G +P   TYN L+  F    +++ A+ +   M 
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
            +G     F+        CK  +   ALSL  +   +   P+ +++N +  GL E    E
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFE 325

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A    + M+      +  TYR  + G      +     +   +    C      +NSL+
Sbjct: 326 EAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLV 385

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM---------DKARDLF 402
              CKS     A +L + +      P  V Y+I+IG +C+ G++         +KA +  
Sbjct: 386 HAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEM 445

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           L         NV++F   + GF +  +  KVI   H+M     +PD S  S V+  L
Sbjct: 446 LSAGTVLNKVNVVSFARCLCGFGKFEKAYKVI---HEMMGNGFVPDTSTYSEVIGFL 499


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 229/471 (48%), Gaps = 45/471 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    F ++I G C +  +    +L   ++ F C+PDV+ Y  L+N  C    T  AL  
Sbjct: 147 PCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGW 206

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M + NG     C P+ VT+ T+I+  C +G + +A+ L   MK+    PNVV Y ++
Sbjct: 207 MRFMID-NG-----CTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTL 260

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM------------------------ 176
           + G+  A+D  +A  L+ EM  + V P+  TFN+++                        
Sbjct: 261 MNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGS 320

Query: 177 -----------DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
                        LC  G +DEA + L+ M++ G+ P    +N+++  +   G    A +
Sbjct: 321 LSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYK 380

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            +  M   G   +  + S LI G  K   ++ A  L  EM+ +G+  +      L  G F
Sbjct: 381 AYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYF 440

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--D 343
            +  V  A+ L++EM+  G+  D   +  FI+GL   G + EA ++F  L++ K  F  +
Sbjct: 441 RMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVF--LQMSKKGFMPN 498

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
              YNSLI G C SGRL+ AL L R +    L+P++ T +I+I GLC +G+M  A D+F 
Sbjct: 499 NFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFR 558

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +M    ++P+++T++ LI G+ +  +     E+++KM      PD +  +I
Sbjct: 559 NMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNI 609



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 222/489 (45%), Gaps = 65/489 (13%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP  VTF ++I   C +  +MEA  LF  ++  G  P+V  Y TL+NG  +      A  
Sbjct: 216 TPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANM 275

Query: 80  LFEEMAN---------------GNGEFGVVCEPNTV--------------TYTTIIDGLC 110
           L+EEM +               G+  +G   + + +               Y   + GLC
Sbjct: 276 LYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLC 335

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA----------------------- 147
             G++D+A + L  M +K I P VV + S+I  +  A                       
Sbjct: 336 WAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSL 395

Query: 148 ----------KDW--NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
                     K W   EA+ L  EM+ +G+  N   F +++D   + G +  A  L + M
Sbjct: 396 TCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEM 455

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G+ PDA  ++  ++G  + G V+ A ++F+ M   G     F Y+ LI G+C +  +
Sbjct: 456 EGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRL 515

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + AL L  EM  KG+ PD+   N +  GL +  +++ A  +F  M   G+  D  TY T 
Sbjct: 516 QEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTL 575

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           IDG CK    V   E+ + +     + DI  YN  + GLC   ++  A+ +   L    +
Sbjct: 576 IDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGV 635

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           VP+ VTY+ ++ G+C D  +++A  +   + + A VPNV+T ++L+  F +   P K I 
Sbjct: 636 VPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIM 694

Query: 436 LLHKMKEIN 444
              K+ EI+
Sbjct: 695 WGQKLNEIS 703



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 206/455 (45%), Gaps = 12/455 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF---GCEPDVFTYTTLVN 66
           ++GR+ +    P +   T L K L    RI +  +++  LR     G  P    +  ++ 
Sbjct: 101 IVGRMREVGLRPSSSAITILFKLLL---RIGDHGSVWKLLRGMIHQGPRPCNRNFNAVIL 157

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G CR  H  V  +L   M          C+P+   Y  +I+  C  G    A   +  M 
Sbjct: 158 GFCRKGHVKVGESLLCVMQK------FKCQPDVYAYNILINAYCTRGQTFDALGWMRFMI 211

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           D    P++VT+ +VI  FC   +  EA+ LF  M + G  PNVV +N +M+   K   + 
Sbjct: 212 DNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIG 271

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A+ L + M    V PD  T+N L+ G    GR      L   +   G       Y+I +
Sbjct: 272 QANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICV 331

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G C    ++ A+    +ML KGI P VV  N++          E+A+K +  M + G+ 
Sbjct: 332 SGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLF 391

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
             + T  + I GL K   + EA +L + + +     +  A+  L+DG  + G +  A  L
Sbjct: 392 PSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSL 451

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           +  +    + P+ V +S  I GL   G +D+A D+FL M +   +PN   ++ LIRGF  
Sbjct: 452 WNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCN 511

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                + + L  +M    ++PD    +I+++ L K
Sbjct: 512 SGRLQEALMLEREMARKGLLPDIFTTNIIINGLCK 546



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/445 (23%), Positives = 191/445 (42%), Gaps = 39/445 (8%)

Query: 51  VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC 110
           V G +   F    +V+ + R      +  + E M   + EF    E +     T++ G  
Sbjct: 35  VLGAQNLKFLAQDVVSWVIRRVGVDRSREVVEFMWKRHAEF----ESDFSVLDTLMRGFL 90

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K     +A E++ +M++  ++P+    T + +      D     +L   M+ QG +P   
Sbjct: 91  KVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNR 150

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN ++   C+ G +     LL +M +   +PD + YN L++ +C  G+   A      M
Sbjct: 151 NFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFM 210

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              GC  ++ ++  +IN +C    +  A +L+  M   G  P+VV +NTL  G  +   +
Sbjct: 211 IDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDI 270

Query: 291 ERAFKLFDEMQRNGVAADTWT-----------------------------------YRTF 315
            +A  L++EM+   VA D  T                                   Y   
Sbjct: 271 GQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNIC 330

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           + GLC  G++ EA++    +        + A+NS+I    ++G  E A + +R +    L
Sbjct: 331 VSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGL 390

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+ +T S +I GL    ++ +ARDL  +M    +  N   F +L+ G+ R+ + +    
Sbjct: 391 FPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYS 450

Query: 436 LLHKMKEINVMPDASIVSIVVDLLA 460
           L ++M+   + PDA   S  ++ L+
Sbjct: 451 LWNEMEGRGIHPDAVAFSAFINGLS 475



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 127/252 (50%), Gaps = 7/252 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG V+  + +   +      PDAV F++ I GL     + EA  +F ++   G  P+ F 
Sbjct: 442 MGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFV 501

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y +L+ G C +     AL L  EMA      G++  P+  T   II+GLCKEG +  A +
Sbjct: 502 YNSLIRGFCNSGRLQEALMLEREMARK----GLL--PDIFTTNIIINGLCKEGRMKSASD 555

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +   M    + P++VTY ++I G+C A D      +  +M   G  P++ T+N+ +  LC
Sbjct: 556 VFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLC 615

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
              KM  A  +L+ +I  GV PD  TYNT+++G C T  +  A  +   +  M     V 
Sbjct: 616 TGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVC-TDVLERAMIVTAKLLKMAFVPNVV 674

Query: 241 SYSILINGYCKN 252
           + ++L++ +CK 
Sbjct: 675 TANLLLSHFCKQ 686



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 7/218 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V   + V  ++ K  F P+   + SLI+G C   R+ EA  L  ++   G  PD+FT
Sbjct: 477 VGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFT 536

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
              ++NGLC+      A ++F  M +     G++  P+ VTY T+IDG CK        E
Sbjct: 537 TNIIINGLCKEGRMKSASDVFRNMHHT----GLI--PDIVTYNTLIDGYCKAFDTVSTDE 590

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           ++ +M      P++ TY   + G C  +  + A  +  E++  GV P+ VT+N +M+ +C
Sbjct: 591 VVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVC 650

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            +  ++ A  +   +++    P+  T N LL  FC  G
Sbjct: 651 TD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQG 687


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 231/444 (52%), Gaps = 18/444 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD  T+ +++KGLC   +  +A  L  ++    C P+  T+ T +   C+      A+ 
Sbjct: 4   APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L E+M     ++G  C P+ + Y+T+++G  + G VD+A +LL  M     +PN V Y +
Sbjct: 64  LLEQMP----KYG--CTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNA 114

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            ++G C A  W E   L  EM+ +   PN  TF+ +++ LC+N  ++ A  +L+ M ++G
Sbjct: 115 ALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYG 174

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD  +YNT++  F    R + A +L   ++SM CK    S++ ++   CK K    A+
Sbjct: 175 YMPDVVSYNTIISCFSDQARADDALKL---LKSMLCKPDTISFNAVLKCLCKAKRWYDAV 231

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L ++ML K  + + +  N L   L +  QV+ A ++F+ M +     D  TY + I+G 
Sbjct: 232 ELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGF 291

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G    A +LF   R + C  DI +YN+ + GLC + R + A EL   +     +PN 
Sbjct: 292 SEQGLDEMAFDLF---RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNE 348

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++I+I  LC  G +++A D++  M +  + P++ T++ LI G+   +E  ++ + L  
Sbjct: 349 VTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGY---SEQGRLDDALKF 405

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           +  +   PD    + ++  L + E
Sbjct: 406 LSTMPCEPDTISYNSILKGLCRAE 429



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 205/435 (47%), Gaps = 19/435 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I  SC  P+ VTF + I+  C    +  A  L  ++  +GC PDV  Y+TLVNG      
Sbjct: 34  IRNSCH-PNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGR 92

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL L   M         +C PNTV Y   + GLC  G  ++  EL+ +M  K+  PN
Sbjct: 93  VDEALKLLNTM---------LCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPN 143

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             T++++I   C  +    A  +  +M   G  P+VV++N I+       + D+A +LL 
Sbjct: 144 DATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLK 203

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M+    +PD  ++N +L   C   R   A EL   M    C+    +++ILI+  C+N 
Sbjct: 204 SML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNG 260

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ A+ ++  M      PD+V +++L  G  E    E AF LF  M      AD ++Y 
Sbjct: 261 QVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYN 317

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             + GLC      +A EL   +    C  +   +N LI  LC+ G +  A++++  +P  
Sbjct: 318 ATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKY 377

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + P++ TY+ +I G    G++D A      M      P+ I+++ +++G  R       
Sbjct: 378 GITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDA 434

Query: 434 IELLHKMKEINVMPD 448
            +L+ +M   N  P+
Sbjct: 435 EKLVTEMLRKNCTPN 449



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 202/381 (53%), Gaps = 18/381 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +L     P+ V + + +KGLC   R  E   L  ++    C P+  T+
Sbjct: 91  GRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATF 147

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL+N LC+      A+ + E+M     ++G +  P+ V+Y TII     +   D A +L
Sbjct: 148 STLINSLCQNRLVEYAVEVLEQMQ----KYGYM--PDVVSYNTIISCFSDQARADDALKL 201

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M     KP+ +++ +V++  C AK W +A  L  +M+ +  + N +TFN+++D LC+
Sbjct: 202 LKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQ 258

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG++ +A  + +LM ++   PD  TY++L++GF   G    A +LF    SM C+  +FS
Sbjct: 259 NGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLF---RSMPCRADIFS 315

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  + G C     + A  L ++M+++   P+ V  N L   L +   V RA  ++++M 
Sbjct: 316 YNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMP 375

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+  D +TY   I+G  + G + +A++   T   + CE D  +YNS++ GLC++ R +
Sbjct: 376 KYGITPDIFTYNALINGYSEQGRLDDALKFLST---MPCEPDTISYNSILKGLCRAERWK 432

Query: 362 IALELFRSLPCGVLVPNVVTY 382
            A +L   +      PN VT+
Sbjct: 433 DAEKLVTEMLRKNCTPNEVTF 453



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 176/383 (45%), Gaps = 67/383 (17%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+  TY +V++G C AK W +A+ L  EM+     PN VTF   +   C+NG +D A 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGF--------------------------------CLT 217
            LL+ M ++G  PD   Y+TL++GF                                C+ 
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIA 122

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           GR     EL   M    C     ++S LIN  C+N+ +E A+ +  +M   G  PDVV +
Sbjct: 123 GRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSY 182

Query: 278 NTLFVGLFEIHQVERAFKLF-------DEMQRNGV-----AADTW--------------- 310
           NT+     +  + + A KL        D +  N V      A  W               
Sbjct: 183 NTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDC 242

Query: 311 -----TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
                T+   ID LC+NG + +A+E+F  +   +C  DI  Y+SLI+G  + G  E+A +
Sbjct: 243 RINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFD 302

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           LFRS+PC     ++ +Y+  + GLC   + D A +L  DM     +PN +TF++LI    
Sbjct: 303 LFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLC 359

Query: 426 RINEPSKVIELLHKMKEINVMPD 448
           +    ++ I++  +M +  + PD
Sbjct: 360 QKGLVNRAIDVYEQMPKYGITPD 382



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 3/160 (1%)

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           VA DT+TY T + GLC      +A EL   +    C  +   + + I   C++G L+ A+
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           EL   +P     P+V+ YS ++ G    G++D+A  L   M      PN + ++  ++G 
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM---LCRPNTVCYNAALKGL 119

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
                  +V EL+ +M   +  P+ +  S +++ L +N +
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRL 159


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 215/441 (48%), Gaps = 30/441 (6%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R  K C  P+ V + +L+ G      +  A  LF +L++ G  P   TY  ++NGLC+  
Sbjct: 231 RWGKGCI-PNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKC 289

Query: 73  HTIVALNLFEEMANGNGEFGVV-----------------------------CEPNTVTYT 103
           +      L  EM     +  V                              CEP+  TY 
Sbjct: 290 NFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYN 349

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           T+I G C++G V +A+ELL     + + PN ++YT +I  +C       A  LFI M ++
Sbjct: 350 TLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEK 409

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G   ++V +  ++  L   G++D A  + D M++ GV PDA  YN L++G C  GR++ A
Sbjct: 410 GHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAA 469

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           K L V M         F  + L++G+ ++ +++ A  L+   ++KG+ P VV +N +  G
Sbjct: 470 KLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKG 529

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
             +   +  A      M+    + D +TY T IDG  K   +  A++LF  +   KC+ +
Sbjct: 530 YCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPN 589

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y SLI+G C++G    A + F  +    L PNVVTY+I+IG  C +G++ KA   F 
Sbjct: 590 VVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFE 649

Query: 404 DMEENAVVPNVITFDMLIRGF 424
            M  N  +PN +TF+ LI G 
Sbjct: 650 LMLLNRCIPNDVTFNYLINGL 670



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 215/440 (48%), Gaps = 6/440 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +   +++GLC E ++ E   L       GC P++  Y TLV+G  +      A  LF
Sbjct: 204 DNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLF 263

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +E+       G +  P T TY  +I+GLCK+        LL++MK++ +  NV  Y S++
Sbjct: 264 KELKMK----GFL--PTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIV 317

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
                     E  +    + + G +P++ T+N ++   C++GK+ EA  LL+  I+ G+ 
Sbjct: 318 DAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLS 377

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  +Y  L+  +C  G+   A +LF+ M   G    + +Y  L++G     E++ AL++
Sbjct: 378 PNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTV 437

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             +M+ +G+ PD  ++N L  GL +  ++  A  L  EM    ++ D +   T +DG  +
Sbjct: 438 RDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIR 497

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
           +G + EA +LF        +  +  YN++I G CK G +  AL   + +  G   P+  T
Sbjct: 498 HGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFT 557

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           YS +I G      +  A  LF  M +    PNV+T+  LI GF R  + S+  +   +M+
Sbjct: 558 YSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMR 617

Query: 442 EINVMPDASIVSIVVDLLAK 461
              + P+    +I++    K
Sbjct: 618 SSGLKPNVVTYTILIGCFCK 637



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 221/474 (46%), Gaps = 22/474 (4%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           + PD +   +L+  L  + ++  A  ++ ++ +  GC  D ++   +V GLC+       
Sbjct: 166 YLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCW-DNYSVCIMVRGLCKERKVEEG 224

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
             L       N  +G  C PN V Y T++DG  K G V++A  L  ++K K   P   TY
Sbjct: 225 RKLI------NDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETY 278

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G C   ++     L +EM ++GV  NV  +N I+D   K+G   E  + L  + +
Sbjct: 279 GIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITE 338

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +G  PD  TYNTL+ G C  G+V+ A+EL       G      SY+ LI+ YCK  +   
Sbjct: 339 NGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLR 398

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L+  M  KG   D+V +  L  GL    +V+ A  + D+M   GV  D   Y   ++
Sbjct: 399 AFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMN 458

Query: 318 GLCKNGYIVEA----VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           GLCK G +  A    VE+ H         D     +L+DG  + G+L+ A +LF      
Sbjct: 459 GLCKKGRLSAAKLLLVEMLHQ----NLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAK 514

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
            + P VV Y+ MI G C  G M+ A      M++    P+  T+  +I G+++ N+    
Sbjct: 515 GMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNA 574

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNVK 487
           ++L  +M +    P+    + +++   +   S  +  +F      EE+  S +K
Sbjct: 575 LKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTF------EEMRSSGLK 622



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 211/414 (50%), Gaps = 22/414 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L   +K   +P+ +++T LI   C + + + A  LF  +   G   D+  Y
Sbjct: 359 GKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAY 418

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+GL       VAL + ++M     E GV+  P+   Y  +++GLCK+G +  AK L
Sbjct: 419 GALVHGLVAAGEVDVALTVRDKMV----ERGVL--PDANVYNVLMNGLCKKGRLSAAKLL 472

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L++M  +N+  +     +++ GF      +EAK+LF   + +G+ P VV +N ++   CK
Sbjct: 473 LVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCK 532

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G M++A   +  M      PD FTY+T++DG+     +++A +LF  M    CK  V +
Sbjct: 533 FGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVT 592

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF-EIHQVERAFKLFDEM 300
           Y+ LING+C+  +   A   + EM S G+KP+VV + T+ +G F +  ++ +A   F+ M
Sbjct: 593 YTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTY-TILIGCFCKEGKISKACSFFELM 651

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIV------EAVEL--------FHTLRILKCEFDIRA 346
             N    +  T+   I+GL  N          E++E+        F T+     E  + A
Sbjct: 652 LLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAA 711

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           YNS++  LC    +  AL+L   +    + P+ V+++ ++ GLC +G+  + ++
Sbjct: 712 YNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKN 765



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 171/340 (50%), Gaps = 6/340 (1%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           GCEPD+ TY TL++G CR      A  L E              PN ++YT +I   CK+
Sbjct: 340 GCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRG------LSPNKLSYTPLIHVYCKQ 393

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G   +A +L + M +K    ++V Y +++ G   A + + A  +  +M+++GV P+   +
Sbjct: 394 GKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVY 453

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           NV+M+ LCK G++  A  LL  M+   +  DAF   TL+DGF   G+++ AK+LF    +
Sbjct: 454 NVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIA 513

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G    V  Y+ +I GYCK   +  AL+    M      PD   ++T+  G  + + +  
Sbjct: 514 KGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHN 573

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A KLF +M +     +  TY + I+G C+ G    A + F  +R    + ++  Y  LI 
Sbjct: 574 ALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIG 633

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             CK G++  A   F  +     +PN VT++ +I GL N+
Sbjct: 634 CFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNN 673


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 218/430 (50%), Gaps = 12/430 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F  D  T T +I   C +S +  A   F K+   G  P++  Y+++++GLC+      A 
Sbjct: 275 FVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAF 334

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTY 137
            L EEM   NG      +PN  T+T++I GLCK+G+ ++A  L L++ +  N KPNV TY
Sbjct: 335 ELLEEMVK-NG-----WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTY 388

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           T++I G+C  +  + A+ LF  M +QG+ PN  T+  ++D  CK G   +A  L++LM  
Sbjct: 389 TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 448

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G  P+  TYN+++DG C  GR   A +L  +      +    +Y+ILI+  CK  ++  
Sbjct: 449 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQ 508

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           AL   ++M   G +PD+ ++ TL       + ++ + KLFDE+ + G+A    TY + I 
Sbjct: 509 ALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMIC 568

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C+   +  AV+ F  +    C  D  +Y +LI GLCK  RL+ A +L+ ++    L P
Sbjct: 569 GYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 628

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
             VT   +    C       A  +   + +   +  V T   LIR      + +      
Sbjct: 629 CEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHT---LIRKLCCEKKVALAALFF 685

Query: 438 HKM--KEINV 445
           HK+  KE+NV
Sbjct: 686 HKLLDKEVNV 695



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 177/332 (53%), Gaps = 5/332 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V+       ++ K   +P+ + ++S+I GLC    + +A  L  ++   G +P+V+T+T+
Sbjct: 295 VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 354

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++GLC+   T  A  LF ++   +       +PN  TYT +I G CKE  + +A+ L  
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNY-----KPNVHTYTAMISGYCKEEKLSRAEMLFE 409

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +MK++ + PN  TYT++I G C A ++++A  L   M ++G  PN  T+N I+D LCK G
Sbjct: 410 RMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRG 469

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           + +EA +LL+   Q+ +  D  TY  L+   C    +N A      M  +G +  +  Y+
Sbjct: 470 RAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYT 529

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI  +C+   ++ +  L+ E++  G+ P    + ++  G     +V  A K F +M  +
Sbjct: 530 TLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDH 589

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           G A D+ +Y   I GLCK   + EA +L+ T+
Sbjct: 590 GCAPDSISYGALISGLCKESRLDEARQLYDTM 621



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 186/370 (50%), Gaps = 10/370 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFT 60
           G V   F +L  ++K+ + P+  T TSLI GLC +     A  LF KL R    +P+V T
Sbjct: 328 GSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHT 387

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++G C+      A  LFE M     E G+V  PNT TYTT+IDG CK G   KA E
Sbjct: 388 YTAMISGYCKEEKLSRAEMLFERMK----EQGLV--PNTNTYTTLIDGHCKAGNFSKAYE 441

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L+  M ++   PN  TY S++ G C      EA +L        ++ + VT+ +++ E C
Sbjct: 442 LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQC 501

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K   M++A   L+ M + G +PD   Y TL+  FC    +  +++LF  +  +G   T  
Sbjct: 502 KRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKE 561

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I GYC+ K++  A+  + +M   G  PD + +  L  GL +  +++ A +L+D M
Sbjct: 562 TYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTM 621

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G++    T  T     CK      A+ +   L  L  +  IR  ++LI  LC   ++
Sbjct: 622 IDKGLSPCEVTRVTLTYEYCKTEDFASAMVI---LERLNKKLWIRTVHTLIRKLCCEKKV 678

Query: 361 EIALELFRSL 370
            +A   F  L
Sbjct: 679 ALAALFFHKL 688



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 199/415 (47%), Gaps = 8/415 (1%)

Query: 35  AESRIMEAAA-LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGV 93
           AE R++E A  +F ++   G  PD  TY  ++ G CR  + + A     EM     E G 
Sbjct: 220 AEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMM----ERGF 275

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           V +    T T II   C++  V++A     ++    + PN++ Y+S+I G C      +A
Sbjct: 276 VVD--NATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQA 333

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLD 212
             L  EM+  G +PNV T   ++  LCK G  + A RL L L+     +P+  TY  ++ 
Sbjct: 334 FELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMIS 393

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C   +++ A+ LF  M+  G      +Y+ LI+G+CK      A  L   M ++G  P
Sbjct: 394 GYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFP 453

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +   +N++  GL +  + E AFKL +   +N + AD  TY   I   CK   + +A+   
Sbjct: 454 NTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFL 513

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
           + +  +  + DI  Y +LI   C+   ++ + +LF  +    L P   TY+ MI G C +
Sbjct: 514 NKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCRE 573

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            ++  A   F  M ++   P+ I++  LI G  + +   +  +L   M +  + P
Sbjct: 574 KKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 628



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 170/357 (47%), Gaps = 1/357 (0%)

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G + +A +++L M+++ +         +I      +    A  +F EM  +GV P+  T+
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
             I+   C+NG + EA R +  M++ G   D  T   ++  FC    VN A   F  +  
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
           MG    + +YS +I+G CK   ++ A  L  EM+  G KP+V  H +L  GL +    ER
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 367

Query: 293 AFKLFDEMQR-NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           AF+LF ++ R +    +  TY   I G CK   +  A  LF  ++      +   Y +LI
Sbjct: 368 AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 427

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG CK+G    A EL   +      PN  TY+ ++ GLC  G+ ++A  L     +N + 
Sbjct: 428 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 487

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
            + +T+ +LI    +  + ++ +  L+KM ++   PD  + + ++    +  +  +S
Sbjct: 488 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDS 544



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 1/245 (0%)

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           F   G++  A ++ + M + G   T    + +I    + + +E A +++ EM ++G+ PD
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +  + VG      V  A +   EM   G   D  T    I   C+   +  AV  FH
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 303

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +  +    ++  Y+S+I GLCK G ++ A EL   +      PNV T++ +I GLC  G
Sbjct: 304 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 363

Query: 394 QMDKARDLFLDM-EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
             ++A  LFL +   +   PNV T+  +I G+ +  + S+   L  +MKE  ++P+ +  
Sbjct: 364 WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 423

Query: 453 SIVVD 457
           + ++D
Sbjct: 424 TTLID 428


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 227/482 (47%), Gaps = 57/482 (11%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F++   + +     D  T+T ++   C    I +A   F ++R  GC P+V TYT L++
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM- 125
              +      A  LFE M +        C PN VTY+ +IDG CK G V+KA ++  +M 
Sbjct: 562 AYLKAKKVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615

Query: 126 ---------------KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
                           D + +PNVVTY +++ GFC +    EA++L   M  +G +PN +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            ++ ++D LCK GK+DEA  +   M +HG     +TY++L+D +    R + A ++   M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
               C   V  Y+ +I+G CK  + + A  L   M  KG +P+VV +  +  G   I ++
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF----------HTLRILKC 340
           E   +L + M   GVA +  TYR  ID  CKNG +  A  L           HT    K 
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855

Query: 341 ------EFD-----------------IRAYNSLIDGLCKSGRLEIALELFRSLP--CGVL 375
                 EF                  +  Y  LID L K+ RLE+AL L   +      L
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           V    TY+ +I  LC   +++ A  LF +M +  V+P + +F  LI+G  R ++ S+ + 
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975

Query: 436 LL 437
           LL
Sbjct: 976 LL 977



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 236/530 (44%), Gaps = 86/530 (16%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL---------- 68
           F PD V +T LI GLC  S   EA     ++R   C P+V TY+TL+ G           
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357

Query: 69  ----------CRTSHTIVALNLFEEMANGNGEFG-------VVCE--PNTVTYTTIIDGL 109
                     C  S  I    +     +G+  +        V C   P  V Y  +I  +
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 110 CKE------GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           C +        +D A++   +M    +  N +  +S  R  C A  + +A  +  EM+ Q
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G  P+  T++ +++ LC   KM+ A  L + M + G+  D +TY  ++D FC  G +  A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           ++ F  M  +GC   V +Y+ LI+ Y K K++  A  L+  MLS+G  P++V ++ L  G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597

Query: 284 LFEIHQVERAFKLFDEM----------------QRNGVAADTWTYRTFIDGLCKNGYIVE 327
             +  QVE+A ++F+ M                  N    +  TY   +DG CK+  + E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL--------------------- 366
           A +L   + +  CE +   Y++LIDGLCK G+L+ A E+                     
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717

Query: 367 ------FRSLPCGVL--------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
                  + L   VL         PNVV Y+ MI GLC  G+ D+A  L   MEE    P
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           NV+T+  +I GF  I +    +ELL +M    V P+     +++D   KN
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 226/482 (46%), Gaps = 31/482 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  S     LGR+    F P   T+  LI+      R+  A+ +  ++ +     D FT 
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 273

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
                 LC+      AL L E       E  V   P+TV YT +I GLC+    ++A + 
Sbjct: 274 RCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCEASLFEEAMDF 324

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+  +  PNVVTY++++ G    K     KR+   MM +G  P+   FN ++   C 
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR------VNHAKELFVSMESMGC 235
           +G    A +LL  M++ G  P    YN L+   C          ++ A++ +  M + G 
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                + S      C   + E A S+  EM+ +G  PD   ++ +   L    ++E AF 
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           LF+EM+R G+ AD +TY   +D  CK G I +A + F+ +R + C  ++  Y +LI    
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF-----------LD 404
           K+ ++  A ELF ++     +PN+VTYS +I G C  GQ++KA  +F           +D
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624

Query: 405 M-----EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           M     ++N+  PNV+T+  L+ GF + +   +  +LL  M      P+  +   ++D L
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684

Query: 460 AK 461
            K
Sbjct: 685 CK 686



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 146/342 (42%), Gaps = 64/342 (18%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+ +L+ G C   R+ EA  L   + + GCEP+   Y  L++GLC+      A  +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 81  FEEMANG-------------NGEFGV----------------VCEPNTVTYTTIIDGLCK 111
             EM+               +  F V                 C PN V YT +IDGLCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G  D+A +L+  M++K  +PNVVTYT++I GF           L   M  +GV PN VT
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQ-------HGVR----------------------- 201
           + V++D  CKNG +D A  LL+ M Q        G R                       
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD 876

Query: 202 ---PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS--YSILINGYCKNKEIE 256
              P    Y  L+D      R+  A  L   + +       +S  Y+ LI   C   ++E
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
            A  L+SEM  KG+ P++    +L  GLF   ++  A  L D
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 176/450 (39%), Gaps = 52/450 (11%)

Query: 50  RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGE-FGVVCEPNTVTYTTIIDG 108
           R  G +     Y  LV+ + R     V     +++ + + E FG            ++  
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEF-------LNVLVRK 209

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            C+ G    A E L ++KD   +P+  TY  +I+ F  A   + A  +  EM    ++ +
Sbjct: 210 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
             T       LCK GK  EA   L L+      PD   Y  L+ G C       A +   
Sbjct: 270 GFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 229 SMESMGCKHTVFSYSILING-----------------------------------YCKNK 253
            M +  C   V +YS L+ G                                   YC + 
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGL------FEIHQVERAFKLFDEMQRNGVAA 307
           +   A  L  +M+  G  P  V++N L   +           ++ A K + EM   GV  
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +     +F   LC  G   +A  +   +       D   Y+ +++ LC + ++E+A  LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +  G LV +V TY+IM+   C  G +++AR  F +M E    PNV+T+  LI  +++ 
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            + S   EL   M     +P+    S ++D
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALID 596



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 117/295 (39%), Gaps = 11/295 (3%)

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
            NV++ + C+NG    A   L  +     RP   TYN L+  F    R++ A  +   M 
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
               +   F+        CK  +   AL+L     ++   PD V +  L  GL E    E
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFE 319

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A    + M+      +  TY T + G      +     + + + +  C    + +NSL+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379

Query: 352 DGLCKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQ------MDKARDLFLD 404
              C SG    A +L + +  CG + P  V Y+I+IG +C D        +D A   + +
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           M    VV N I      R      +  K   ++ +M     +PD S  S V++ L
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 3/225 (1%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++L+  +C+N     AL     +     +P    +N L     +  +++ A  +  EM  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D +T R F   LCK G   EA+ L  T   +    D   Y  LI GLC++   E 
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVP---DTVFYTKLISGLCEASLFEE 320

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A++    +     +PNVVTYS ++ G  N  Q+ + + +   M      P+   F+ L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
            +    + S   +LL KM +   MP   + +I++  +  ++ SLN
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 99/250 (39%), Gaps = 64/250 (25%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL- 68
           VL ++L++   P+ V +T +I GLC   +  EA  L   +   GC+P+V TYT +++G  
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 69  ----------------------------------CRTSHTIVALNLFEEMANG------- 87
                                             C+     VA NL EEM          
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850

Query: 88  ---------NGEF----GVVCE-------PNTVTYTTIIDGLCKEGFVDKAKELLLQMK- 126
                    N EF    G++ E       P    Y  +ID L K   ++ A  LL ++  
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910

Query: 127 -DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
               +     TY S+I   C A     A +LF EM  +GV P + +F  ++  L +N K+
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970

Query: 186 DEASRLLDLM 195
            EA  LLD +
Sbjct: 971 SEALLLLDFI 980


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 239/450 (53%), Gaps = 21/450 (4%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           +SHG    GR +     P+  T+  +++ LCA   +  A  LF  LR     PD  TY+T
Sbjct: 145 LSHG--AFGRRI----APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYST 198

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+ GL +      AL+L +EM           +P+ V Y  ++ G  K G  +K   +  
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSR------VQPDVVCYNALLGGCFKAGEFEKVMRVWD 252

Query: 124 QM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           ++ KD   +PN+ TY  ++ G C    + E   ++  M+   +QP+V+T+ +++  LC++
Sbjct: 253 KLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRS 312

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +D A+R+   +I+ G+  DA  YN+L+ GFC  GRV  A + + S    G ++ + +Y
Sbjct: 313 GDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRN-LRTY 371

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIK--PDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +I+I G   +  ++ A+ L+ ++L K +   PD V   TL  GL +     +AF +F+E 
Sbjct: 372 NIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEA 430

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           + +G   D ++Y + I+GLC  G +V+AV+++  +    C+ +   YN+LI G C+  R 
Sbjct: 431 RVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRT 490

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A+ ++  +      P V+TY+ +I GLC   +  +A  +  +M EN   P++ T+  L
Sbjct: 491 SDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSL 550

Query: 421 IRGFI---RINEPSKVI-ELLHKMKEINVM 446
           IRG     +I++   +  ++L+K  +++VM
Sbjct: 551 IRGLFSDKKIDDALSIWKQILYKGLKVDVM 580



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 223/427 (52%), Gaps = 9/427 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      V  R++ +   PD +T+  LI GLC    +  AA +++++   G   D   Y
Sbjct: 278 GRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +LV G C+      A   ++         G     N  TY  +I GL   G VD+A EL
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWDSA-------GFAGLRNLRTYNIMIKGLFDSGMVDEAIEL 390

Query: 122 L-LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
             L  KD    P+ VT+ ++I G C     N+A  +F E    G Q +V +++ +++ LC
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G++ +A ++ + M + G +P++  YN L+ GFC   R + A  ++  M   GC  TV 
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G CK ++ + A S+  EM+  G  PD+  + +L  GLF   +++ A  ++ ++
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGR 359
              G+  D   +   I GLC  G + EA+ +F  ++  K C  ++  YN+L+DGL ++G 
Sbjct: 571 LYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGY 630

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A  L+ S+    L P++++Y+  I GLC+  ++ +   L  ++    ++P VIT+++
Sbjct: 631 IDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNI 690

Query: 420 LIRGFIR 426
           L+R  I+
Sbjct: 691 LVRAVIK 697



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 224/437 (51%), Gaps = 9/437 (2%)

Query: 33  LCAESR-IMEAAAL--FTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L A SR IM  AAL  F  L  + GC P + ++  L++   R      A   F  +++G 
Sbjct: 90  LSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG- 148

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
             FG    PN  TY  ++  LC  G +D+A  L   ++ + + P+ +TY++++ G     
Sbjct: 149 -AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQD 207

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH-GVRPDAFTY 207
             + A  L  EM    VQP+VV +N ++    K G+ ++  R+ D +++  G RP+  TY
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           N +LDG C  GR     E++  M +   +  V +Y ILI+G C++ +++GA  +YSE++ 
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            G+  D  ++N+L  G  +  +V+ A+K +D     G+  +  TY   I GL  +G + E
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDE 386

Query: 328 AVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           A+EL+  L + + C  D   + +LI GLC++G    A  +F          +V +YS MI
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLCN G++  A  ++  M+++   PN   ++ LI GF ++   S  + +  KM +    
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 447 PDASIVSIVVDLLAKNE 463
           P     + ++D L K E
Sbjct: 507 PTVITYNTLIDGLCKAE 523



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 245/499 (49%), Gaps = 49/499 (9%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTY 61
           R+ H   +L  + +S   PD V + +L+ G        +   ++ KL +  G  P++ TY
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++GLC+         ++E M   N       +P+ +TY  +I GLC+ G VD A  +
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANN------LQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYA-------KDWNEA---------------KRLFIE 159
             ++    +  +   Y S+++GFC A       K W+ A               K LF  
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 160 -MMDQGVQ------------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
            M+D+ ++            P+ VTF  ++  LC+NG  ++A  + +     G + D F+
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y+++++G C  GR+  A +++  M+  GCK     Y+ LI+G+C+      A+ +YS+M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G  P V+ +NTL  GL +  + + A  +  EM  NG   D  TY + I GL  +  I 
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVLVPNVVTY 382
           +A+ ++  +     + D+  +N LI GLC +G+++ AL +F  +     C    PN+VTY
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP---PNLVTY 618

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++ GL   G +DKA  L+  + E+ + P++I+++  I+G    +   + I+LL ++  
Sbjct: 619 NTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678

Query: 443 INVMPDASIVSIVVDLLAK 461
             ++P     +I+V  + K
Sbjct: 679 RGIIPTVITWNILVRAVIK 697



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 203/395 (51%), Gaps = 7/395 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     V   I+K+    DA  + SL+KG C   R+ EA   +      G   ++ TY
Sbjct: 313 GDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTY 371

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ GL  +     A+ L++ +     E  V C P+TVT+ T+I GLC+ GF +KA  +
Sbjct: 372 NIMIKGLFDSGMVDEAIELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFANKAFTI 426

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             + +    + +V +Y+S+I G C      +A +++ +M   G +PN   +N ++   C+
Sbjct: 427 FEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQ 486

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +  +A R+   M  +G  P   TYNTL+DG C   +   A  +   M   G    + +
Sbjct: 487 VYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITT 546

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM- 300
           Y  LI G   +K+I+ ALS++ ++L KG+K DV++HN L  GL    +V+ A  +F +M 
Sbjct: 547 YGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK 606

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           ++     +  TY T +DGL + GYI +A  L+ ++     E DI +YN+ I GLC   R+
Sbjct: 607 EKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRI 666

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
              ++L   +    ++P V+T++I++  +   G +
Sbjct: 667 HEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 42/271 (15%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +++S+I GLC   R+++A  ++ K+   GC+P+   Y  L++G C+   T  A+ ++
Sbjct: 438 DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIY 497

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +MA+ NG     C P  +TY T+IDGLCK     +A  +  +M +    P++ TY S+I
Sbjct: 498 SKMAD-NG-----CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLI 551

Query: 142 RGF-----------------------------------CYAKDWNEAKRLFIEMMDQ-GV 165
           RG                                    C A   +EA  +F +M ++   
Sbjct: 552 RGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNC 611

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN+VT+N +MD L + G +D+A+ L   + + G+ PD  +YNT + G C   R++   +
Sbjct: 612 PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQ 671

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           L   + S G   TV +++IL+    K   I+
Sbjct: 672 LLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 223/430 (51%), Gaps = 18/430 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD  T+ +++KGLC   +  EA  L  ++    C P+  T+ T +   C+      A+ 
Sbjct: 4   APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 63

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L ++M      +G  C P+ V Y+T+I+G  ++G VD+A +LL  M     KPN V Y +
Sbjct: 64  LLDQMP----RYG--CTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 114

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            ++G C A+ W +   L  EM+ +G  PN  TF++++  LC+N  +D A  +L+ M ++G
Sbjct: 115 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 174

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD   YN +++     GRV+ A  L   + SM CK     ++ ++ G+C+ +    A 
Sbjct: 175 CEPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDALGFNAVLKGFCRAERWHDAS 231

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L ++M         +  N L   L +   V  A ++F++M R     D  TY + ++G 
Sbjct: 232 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 291

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G +  A++LF   R + C+ DI +YN+++ GLC++ R E A EL   +      PN 
Sbjct: 292 SEQGLVEVAIQLF---RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 348

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VT++I+I  LC  G +D+A ++   M      P++ T++ LI GF   +E  ++ + L  
Sbjct: 349 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF---SEQGRLDDALKL 405

Query: 440 MKEINVMPDA 449
           +  ++  PDA
Sbjct: 406 LSTMSCKPDA 415



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 211/442 (47%), Gaps = 18/442 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VTF + I+  C    +  A  L  ++  +GC PDV  Y+TL+NG     H   AL+L
Sbjct: 40  PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 99

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M         +C+PNTV Y   + GLC     +   EL+ +M  K   PN  T++ +
Sbjct: 100 LNTM---------LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSML 150

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C     + A  +  +M   G +P+ V +N+I++ L + G++D+A RLL+ M+    
Sbjct: 151 ISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---C 207

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PDA  +N +L GFC   R + A EL   M    C     +++ILI+  C+N  +  A  
Sbjct: 208 KPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQ 267

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ +M      PD+V +++L  G  E   VE A +LF  M       D ++Y   + GLC
Sbjct: 268 VFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLC 324

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           +     +A EL   +    C  +   +N LI+ LC+ G ++ A+E+   +P     P++ 
Sbjct: 325 RAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIF 384

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I G    G++D A  L   M   +  P+ I+++  ++G  R        EL+ +M
Sbjct: 385 TYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEM 441

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
                 P+         LL  N
Sbjct: 442 LRNKCTPNEVTFKYANHLLMPN 463



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 12/206 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V++   V  ++ +   TPD VT++SL+ G   +  +  A  LF   R   C+PD+F+Y
Sbjct: 260 GLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RSMPCKPDIFSY 316

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ GLCR +    A  L  EM       G  C PN VT+  +I+ LC++G VD+A E+
Sbjct: 317 NAVLKGLCRAARWEDAGELIAEMV------GKDCPPNEVTFNILINSLCQKGLVDRAIEV 370

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM +    P++ TY ++I GF      ++A +L   M     +P+ +++N  +  LC+
Sbjct: 371 LEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCR 427

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTY 207
             +  +A  L+  M+++   P+  T+
Sbjct: 428 AERWQDAEELVAEMLRNKCTPNEVTF 453



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%)

Query: 305 VAADTWTYRTFIDGLC-KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           VA DT+TY T + GLC    +      +   +R  +C  +   + + I   C++G L+ A
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRN-RCPPNEVTFATQIRSFCQNGLLDRA 61

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           ++L   +P     P+VV YS +I G    G +D+A DL   M      PN + ++  ++G
Sbjct: 62  VQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKG 118

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
                    + EL+ +M      P+ +  S+++  L +N +
Sbjct: 119 LCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNL 159


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 225/454 (49%), Gaps = 48/454 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    +  ++  L  E+RI     ++  ++  G EP+VFTY  L+  LC+ +    A  L
Sbjct: 143 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 202

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM+N        C PN V+YTT+I  +C+ G V + ++L      +  +P V  Y ++
Sbjct: 203 LVEMSNKG------CCPNAVSYTTVISSMCEVGMVKEGRQL-----AERFEPVVSVYNAL 251

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C  +D+     L  EM+++G+ PNV++++ +++EL  +G+++ A  LL  M++ G 
Sbjct: 252 INGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGC 311

Query: 201 RPDAFT------------------------------------YNTLLDGFCLTGRVNHAK 224
            P+  T                                    YNTL+ GFC  G ++ A 
Sbjct: 312 HPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAV 371

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            +F+ ME +GC   + +Y  LING+ K   +EGA+ ++++ML+ G  P+VV++ ++   L
Sbjct: 372 SVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEAL 431

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFD 343
               + + A  L + M +   A    T+  FI GLC  G +  A ++F  + +  +C  +
Sbjct: 432 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPN 491

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           I  YN L+DGL K+ R+E A  L R +    +  +  TY+ ++ G CN G    A  L  
Sbjct: 492 IVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVG 551

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
            M  N   P+ IT +M+I  + +  +  + +++L
Sbjct: 552 KMMVNGKSPDEITMNMIILAYCKQGKAERAVQML 585



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 197/391 (50%), Gaps = 13/391 (3%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
            A  +F +++ FGC+P V  Y  +++ L   +   +   ++ +M           EPN  
Sbjct: 128 RAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG------FEPNVF 181

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  ++  LCK   VD AK+LL++M +K   PN V+YT+VI   C      E ++L    
Sbjct: 182 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL---- 237

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
             +  +P V  +N +++ LCK         L+  M++ G+ P+  +Y+TL++    +G++
Sbjct: 238 -AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQI 296

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNT 279
             A  L   M   GC   + + S L+ G         AL ++++M+   G++P+VV +NT
Sbjct: 297 ELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNT 356

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G      +++A  +F  M+  G + +  TY + I+G  K G +  AV +++ +    
Sbjct: 357 LVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSG 416

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C  ++  Y S+++ LC+  + + A  L   +      P+V T++  I GLC+ G++D A 
Sbjct: 417 CCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 476

Query: 400 DLFLDMEEN-AVVPNVITFDMLIRGFIRINE 429
            +F  ME+     PN++T++ L+ G  + N 
Sbjct: 477 KVFRQMEQQYRCPPNIVTYNELLDGLAKANR 507



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 190/374 (50%), Gaps = 8/374 (2%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G  ++  +++   +P+ +++++LI  L    +I  A +L  ++   GC P++ T ++LV 
Sbjct: 264 GVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVK 323

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G      T  AL+++ +M  G   FG+  +PN V Y T++ G C  G +DKA  + L M+
Sbjct: 324 GCFVRGTTFDALDMWNQMIRG---FGL--QPNVVAYNTLVQGFCSHGNIDKAVSVFLHME 378

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +    PN+ TY S+I GF        A  ++ +M+  G  PNVV +  +++ LC++ K  
Sbjct: 379 EIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFK 438

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM-GCKHTVFSYSIL 245
           EA  L+++M +    P   T+N  + G C  GR++ A+++F  ME    C   + +Y+ L
Sbjct: 439 EAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNEL 498

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++G  K   IE A  L  E+  +G++     +NTL  G         A +L  +M  NG 
Sbjct: 499 LDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGK 558

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLEIA 363
           + D  T    I   CK G    AV++   +   + ++  D+ +Y ++I GLC+S   E  
Sbjct: 559 SPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 618

Query: 364 LELFRSLPCGVLVP 377
           + LF  +    ++P
Sbjct: 619 VILFERMISERIIP 632



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 203/469 (43%), Gaps = 76/469 (16%)

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + ++  L + S   +AL+ F+ +AN N     + +   +T+  +I  L  +G VD  + L
Sbjct: 43  SAVLKRLRQESCVPLALHFFKSIANSN-----LFKHTPLTFEVMIRKLAMDGQVDSVQYL 97

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QMK +    +   + SVI  +        A  +F  + + G  P+V  +N ++D L  
Sbjct: 98  LQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG 157

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++     +   M + G  P+ FTYN LL   C   +V+ AK+L V M + GC     S
Sbjct: 158 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVS 217

Query: 242 YSI------------------------------LINGYCKNKEIEGALSLYSEMLSKGIK 271
           Y+                               LING CK ++ +G + L SEM+ KGI 
Sbjct: 218 YTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGIS 277

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV----------------------AADT 309
           P+V+ ++TL   L    Q+E AF L  +M + G                       A D 
Sbjct: 278 PNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDM 337

Query: 310 W--------------TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           W               Y T + G C +G I +AV +F  +  + C  +IR Y SLI+G  
Sbjct: 338 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFT 397

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K G LE A+ ++  +      PNVV Y+ M+  LC   +  +A  L   M +    P+V 
Sbjct: 398 KRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVP 457

Query: 416 TFDMLIRGFI---RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           TF+  I+G     R++   KV   +   ++    P+    + ++D LAK
Sbjct: 458 TFNAFIKGLCDAGRLDWAEKVFRQME--QQYRCPPNIVTYNELLDGLAK 504



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 7/216 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +  ++L S   P+ V +TS+++ LC  S+  EA +L   +    C P V T+
Sbjct: 400 GSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 459

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              + GLC       A  +F +M     E    C PN VTY  ++DGL K   +++A  L
Sbjct: 460 NAFIKGLCDAGRLDWAEKVFRQM-----EQQYRCPPNIVTYNELLDGLAKANRIEEAYGL 514

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++  + ++ +  TY +++ G C A     A +L  +MM  G  P+ +T N+I+   CK
Sbjct: 515 TREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCK 574

Query: 182 NGKMDEASRLLDLMI--QHGVRPDAFTYNTLLDGFC 215
            GK + A ++LDL+   +   RPD  +Y  ++ G C
Sbjct: 575 QGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLC 610


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 241/468 (51%), Gaps = 12/468 (2%)

Query: 2   GRVSHGFVVLGRILKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G++     +L R++      PD VT+ +++K +  + R+ +   L   ++  G  P+  T
Sbjct: 218 GKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVT 277

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  LV G C+      A  + E M   N        P+  TY  +I+G+C  G + +  E
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTN------ILPDLCTYNILINGVCNAGSIREGLE 331

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN-EAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L+  MK   ++P+VVTY ++I G C+    + EAK+L  +M + GV+PN VT N+ +  L
Sbjct: 332 LMDVMKSLKLQPDVVTYNTLIDG-CFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWL 390

Query: 180 CKNGKMDEASRLLDLMIQ-HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           CK  K +E +R +  +++ HG  PD  TY+TL+  +   G ++ A E+   M   G K  
Sbjct: 391 CKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
             + + +++  CK ++++ A +L      +G   D V + TL +G F   +VE+AF+++D
Sbjct: 451 TITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWD 510

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM+R  +     T+ + I GLC +G    A+E F  L       D   +NS+I G CK G
Sbjct: 511 EMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEG 570

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R+E A E +         P+  T +I++ GLC +G  +KA + F  +     V + +T++
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYN 629

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEIS 465
            +I  F +  +  +  +LL +M+E  + PD  +  SI+  L+   ++S
Sbjct: 630 TMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLS 677



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 246/486 (50%), Gaps = 11/486 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPDV 58
           G+      V  ++++    P+ +T  +L+ GL    +   I  A  +F  +   G   DV
Sbjct: 145 GKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDV 204

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            T+  LVNG C       AL + E M +   EF V   P+ VTY TI+  + K+G +   
Sbjct: 205 KTFNVLVNGYCLEGKLEDALGMLERMVS---EFNV--NPDNVTYNTILKAMSKKGRLSDV 259

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMD 177
           K+LLL MK   + PN VTY +++ G+C      EA ++ +E+M Q  + P++ T+N++++
Sbjct: 260 KDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQI-VELMKQTNILPDLCTYNILIN 318

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            +C  G + E   L+D+M    ++PD  TYNTL+DG    G    AK+L   ME+ G K 
Sbjct: 319 GVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKP 378

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
              +++I +   CK ++ E       E++   G  PD+V ++TL     ++  +  A ++
Sbjct: 379 NQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
             EM + G+  +T T  T +D LCK   + EA  L  +        D   Y +LI G  +
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFR 498

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
             ++E A E++  +    + P V T++ +IGGLC+ G+ + A + F ++ E+ ++P+  T
Sbjct: 499 EEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCT 558

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
           F+ +I G+ +     K  E  ++  + +  PD    +I+++ L K  ++  +L  F    
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618

Query: 477 QQEEVD 482
            + EVD
Sbjct: 619 TEREVD 624



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 213/406 (52%), Gaps = 14/406 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F ++  + ++   PD  T+  LI G+C    I E   L   ++    +PDV T
Sbjct: 288 LGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVT 347

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G      ++ A  L E+M N     GV  +PN VT+   +  LCKE   +K +E
Sbjct: 348 YNTLIDGCFELGLSLEAKKLMEQMEND----GV--KPNQVTHNISLKWLCKE---EKREE 398

Query: 121 LLLQMKD----KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +  ++K+        P++VTY ++I+ +    D + A  +  EM  +G++ N +T N I+
Sbjct: 399 VTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D LCK  K+DEA  LLD   + G   D  TY TL+ G+    +V  A E++  M+ +   
Sbjct: 459 DALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKIT 518

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
            TV +++ LI G C + + E A+  + E+   G+ PD    N++ +G  +  +VE+AF+ 
Sbjct: 519 PTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEF 578

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           ++E  ++    D +T    ++GLCK G   +A+  F+TL I + E D   YN++I   CK
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-ITEREVDTVTYNTMISAFCK 637

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
             +L+ A +L   +    L P+  TY+ +I  L  DG++ +A +L 
Sbjct: 638 DKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELL 683



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 176/365 (48%), Gaps = 31/365 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P+ VT    +K LC E +  E      +L  + G  PD+ TY TL+    +      AL 
Sbjct: 378 PNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  EM    G+ G+  + NT+T  TI+D LCKE  VD+A  LL     +    + VTY +
Sbjct: 438 MMREM----GQKGI--KMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGT 491

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G+   +   +A  ++ EM    + P V TFN ++  LC +GK + A    D + + G
Sbjct: 492 LIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESG 551

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD  T+N+++ G+C  GRV  A E +        K   ++ +IL+NG CK    E AL
Sbjct: 552 LLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           + ++ ++++  + D V +NT+     +  +++ A+ L  EM+   +  D +TY + I  L
Sbjct: 612 NFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSL 670

Query: 320 CKNGYIVEAVELFHTL--------RILKCEFDIR---------------AYNSLIDGLCK 356
            ++G + EA EL            R L  E +                 AY+ +I+ LC 
Sbjct: 671 MEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCS 730

Query: 357 SGRLE 361
            GRL+
Sbjct: 731 RGRLK 735



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 116/223 (52%), Gaps = 10/223 (4%)

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI---HQVERAFKLFD 298
           + I ++ Y    +   AL ++ +M+   +KP+++  NTL +GL        +  A ++FD
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFD 193

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR----AYNSLIDGL 354
           +M + GV+ D  T+   ++G C  G + +A+ +   L  +  EF++      YN+++  +
Sbjct: 194 DMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGM---LERMVSEFNVNPDNVTYNTILKAM 250

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            K GRL    +L   +    LVPN VTY+ ++ G C  G + +A  +   M++  ++P++
Sbjct: 251 SKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDL 310

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            T+++LI G        + +EL+  MK + + PD    + ++D
Sbjct: 311 CTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLID 353



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 19/188 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F      +K  F PD  T   L+ GLC E    +A   F  L +   E D  TY
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-ITEREVDTVTY 628

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++  C+      A +L  EM           EP+  TY +II  L ++G + +A EL
Sbjct: 629 NTMISAFCKDKKLKEAYDLLSEMEEKR------LEPDRFTYNSIITSLMEDGKLSEADEL 682

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +   K        + S+ R      + N A         + ++   + ++ +++ELC 
Sbjct: 683 LKKFSGK--------FGSMKRNLHLETEKNPA----TSESKEELKTEAIAYSDVINELCS 730

Query: 182 NGKMDEAS 189
            G++ E S
Sbjct: 731 RGRLKEHS 738


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 207/408 (50%), Gaps = 9/408 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   +  +L+ GL    R+  A   F         PD++T+ T+++GLCR      A ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE---LLLQMKDKNIKPNVVTY 137
            +++      +G+   P+  TY ++IDG CK+G          LL +M +  I P  VT+
Sbjct: 214 AKDIK----AWGLA--PSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTF 267

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G+C   +   A R+F EM  QG+  +VVT+N ++  LC  GK++E  +L++ M  
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ P+  T+  +L GFC  G +  A +    M     +  V  Y+ILI+ Y +  ++E 
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A+++   M  KGI P+V  +N L  G         A  L DEM+  G+ AD  TY   I 
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC  G + +AV+L   +  +  E +   YN++I G C  G ++ A E+   +       
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           NVVTY++ I   C  G+MD+A DL  +M +  +VPN IT++ +  G +
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 188/382 (49%), Gaps = 9/382 (2%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           L+   +PD  TF ++I GLC   ++ +A  +   ++ +G  P V TY +L++G C+    
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242

Query: 75  IVALN---LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
               +   L +EM     E G+   P  VT+  +I+G CK      A  +  +MK + I 
Sbjct: 243 GNMYHVDMLLKEMV----EAGI--SPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIA 296

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
            +VVTY S+I G C      E  +L  EM D G+ PN +TF  ++   CK G M +A+  
Sbjct: 297 ASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDW 356

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           +D M +  V PD   YN L+D +   G++  A  +  +M   G    V +Y+ LI G+ +
Sbjct: 357 IDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           + +   A  L  EM  KGI+ DVV +N L   L    +V +A KL DEM   G+  +  T
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I G C  G I  A E+   +   +   ++  YN  I   C+ G+++ A +L   + 
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 372 CGVLVPNVVTYSIMIGGLCNDG 393
              LVPN +TY  +  G+   G
Sbjct: 537 DKCLVPNGITYETIKEGMMEKG 558



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 183/356 (51%), Gaps = 3/356 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY---AKDWNEA 153
           P+  T+ T+I GLC+ G + KA ++   +K   + P+V TY S+I G+C    A +    
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             L  EM++ G+ P  VTF V+++  CKN     A R+ + M Q G+     TYN+L+ G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C  G+V    +L   ME +G      ++  ++ G+CK   +  A      M  + ++PD
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VVI+N L      + ++E A  + + M + G++ +  TY   I G  ++G    A  L  
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            ++    E D+  YN LI  LC  G +  A++L   +    L PN +TY+ +I G C+ G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
            +  A ++   ME+     NV+T+++ I+ F +I +  +  +LL++M +  ++P+ 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 167/321 (52%), Gaps = 3/321 (0%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +P+  +  +++ G   AK  + A++ F   + + V P++ TFN ++  LC+ G++ +A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCL---TGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           +   +   G+ P   TYN+L+DG+C     G + H   L   M   G   T  ++ +LIN
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           GYCKN     A+ ++ EM  +GI   VV +N+L  GL    +VE   KL +EM+  G++ 
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  T+   + G CK G + +A +    +     E D+  YN LID   + G++E A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            ++    + PNV TY+ +I G    G    A  L  +M+E  +  +V+T+++LI      
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 428 NEPSKVIELLHKMKEINVMPD 448
            E  K ++LL +M E+ + P+
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPN 473



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 160/323 (49%), Gaps = 6/323 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + H  ++L  ++++  +P AVTF  LI G C  S    A  +F +++  G    V TY
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++GLC        + L EEM     + G+   PN +T+  ++ G CK+G +  A + 
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEME----DLGL--SPNEITFGCVLKGFCKKGMMADANDW 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M ++N++P+VV Y  +I  +       +A  +   M  +G+ PNV T+N ++    +
Sbjct: 357 IDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    AS LLD M + G+  D  TYN L+   C  G V  A +L   M  +G +    +
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I G+C    I+ A  + + M     + +VV +N       +I +++ A  L +EM 
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 302 RNGVAADTWTYRTFIDGLCKNGY 324
              +  +  TY T  +G+ + GY
Sbjct: 537 DKCLVPNGITYETIKEGMMEKGY 559



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 9/300 (3%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +P+  + N ++  L    ++D A +     ++  V PD +T+NT++ G C  G++  A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY------SEMLSKGIKPDVVIHNT 279
           +   +++ G   +V +Y+ LI+GYCK     GA ++Y       EM+  GI P  V    
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G  +      A ++F+EM++ G+AA   TY + I GLC  G + E V+L   +  L 
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              +   +  ++ G CK G +  A +    +    + P+VV Y+I+I      G+M+ A 
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +   M +  + PNV T++ LI GF R  +      LL +MKE  +  D    ++++  L
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 6/183 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V   + K   +P+  T+  LI G         A+ L  +++  G E DV T
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+  LC       A+ L +EM+    E G+  EPN +TY TII G C +G +  A E
Sbjct: 442 YNVLIGALCCKGEVRKAVKLLDEMS----EVGL--EPNHLTYNTIIQGFCDKGNIKSAYE 495

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M+    + NVVTY   I+ FC     +EA  L  EM+D+ + PN +T+  I + + 
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555

Query: 181 KNG 183
           + G
Sbjct: 556 EKG 558



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 3/134 (2%)

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+L+ GL  + R+++A + FRS     + P++ T++ +I GLC  GQ+ KA D+  D++ 
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIE---LLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             + P+V T++ LI G+ +      +     LL +M E  + P A    ++++   KN  
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 465 SLNSLPSFTVHEQQ 478
           +  ++  F   +QQ
Sbjct: 280 TAAAVRVFEEMKQQ 293


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 227/482 (47%), Gaps = 57/482 (11%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F++   + +     D  T+T ++   C    I +A   F ++R  GC P+V TYT L++
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM- 125
              +      A  LFE M +        C PN VTY+ +IDG CK G V+KA ++  +M 
Sbjct: 562 AYLKAKKVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615

Query: 126 ---------------KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
                           D + +PNVVTY +++ GFC +    EA++L   M  +G +PN +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            ++ ++D LCK GK+DEA  +   M +HG     +TY++L+D +    R + A ++   M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
               C   V  Y+ +I+G CK  + + A  L   M  KG +P+VV +  +  G   I ++
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF----------HTLRILKC 340
           E   +L + M   GVA +  TYR  ID  CKNG +  A  L           HT    K 
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855

Query: 341 ------EFD-----------------IRAYNSLIDGLCKSGRLEIALELFRSLP--CGVL 375
                 EF                  +  Y  LID L K+ RLE+AL L   +      L
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           V    TY+ +I  LC   +++ A  LF +M +  V+P + +F  LI+G  R ++ S+ + 
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975

Query: 436 LL 437
           LL
Sbjct: 976 LL 977



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 236/530 (44%), Gaps = 86/530 (16%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL---------- 68
           F PD V +T LI GLC  S   EA     ++R   C P+V TY+TL+ G           
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357

Query: 69  ----------CRTSHTIVALNLFEEMANGNGEFG-------VVCE--PNTVTYTTIIDGL 109
                     C  S  I    +     +G+  +        V C   P  V Y  +I  +
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 110 CKE------GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           C +        +D A++   +M    +  N +  +S  R  C A  + +A  +  EM+ Q
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G  P+  T++ +++ LC   KM+ A  L + M + G+  D +TY  ++D FC  G +  A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           ++ F  M  +GC   V +Y+ LI+ Y K K++  A  L+  MLS+G  P++V ++ L  G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597

Query: 284 LFEIHQVERAFKLFDEM----------------QRNGVAADTWTYRTFIDGLCKNGYIVE 327
             +  QVE+A ++F+ M                  N    +  TY   +DG CK+  + E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL--------------------- 366
           A +L   + +  CE +   Y++LIDGLCK G+L+ A E+                     
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717

Query: 367 ------FRSLPCGVL--------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
                  + L   VL         PNVV Y+ MI GLC  G+ D+A  L   MEE    P
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           NV+T+  +I GF  I +    +ELL +M    V P+     +++D   KN
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 226/482 (46%), Gaps = 31/482 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  S     LGR+    F P   T+  LI+      R+  A+ +  ++ +     D FT 
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 273

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
                 LC+      AL L E       E  V   P+TV YT +I GLC+    ++A + 
Sbjct: 274 RCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCEASLFEEAMDF 324

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+  +  PNVVTY++++ G    K     KR+   MM +G  P+   FN ++   C 
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR------VNHAKELFVSMESMGC 235
           +G    A +LL  M++ G  P    YN L+   C          ++ A++ +  M + G 
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                + S      C   + E A S+  EM+ +G  PD   ++ +   L    ++E AF 
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           LF+EM+R G+ AD +TY   +D  CK G I +A + F+ +R + C  ++  Y +LI    
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF-----------LD 404
           K+ ++  A ELF ++     +PN+VTYS +I G C  GQ++KA  +F           +D
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624

Query: 405 M-----EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           M     ++N+  PNV+T+  L+ GF + +   +  +LL  M      P+  +   ++D L
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684

Query: 460 AK 461
            K
Sbjct: 685 CK 686



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 168/357 (47%), Gaps = 45/357 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+ +L+ G C   R+ EA  L   + + GCEP+   Y  L++GLC+      A  +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 81  FEEMANG-------------NGEFGV----------------VCEPNTVTYTTIIDGLCK 111
             EM+               +  F V                 C PN V YT +IDGLCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G  D+A +L+  M++K  +PNVVTYT++I GF           L   M  +GV PN VT
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM- 230
           + V++D  CKNG +D A  LL+ M Q         Y  +++GF         KE   S+ 
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--------NKEFIESLG 868

Query: 231 --ESMGCKHT---VFSYSILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIHNTLFVG 283
             + +G   T   +  Y +LI+   K + +E AL L  E+   S  +      +N+L   
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
           L   ++VE AF+LF EM + GV  +  ++ + I GL +N  I EA+ L   +  + C
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 985



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 176/450 (39%), Gaps = 52/450 (11%)

Query: 50  RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGE-FGVVCEPNTVTYTTIIDG 108
           R  G +     Y  LV+ + R     V     +++ + + E FG            ++  
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEF-------LNVLVRK 209

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            C+ G    A E L ++KD   +P+  TY  +I+ F  A   + A  +  EM    ++ +
Sbjct: 210 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
             T       LCK GK  EA   L L+      PD   Y  L+ G C       A +   
Sbjct: 270 GFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 229 SMESMGCKHTVFSYSILING-----------------------------------YCKNK 253
            M +  C   V +YS L+ G                                   YC + 
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGL------FEIHQVERAFKLFDEMQRNGVAA 307
           +   A  L  +M+  G  P  V++N L   +           ++ A K + EM   GV  
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +     +F   LC  G   +A  +   +       D   Y+ +++ LC + ++E+A  LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +  G LV +V TY+IM+   C  G +++AR  F +M E    PNV+T+  LI  +++ 
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            + S   EL   M     +P+    S ++D
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALID 596



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 117/295 (39%), Gaps = 11/295 (3%)

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
            NV++ + C+NG    A   L  +     RP   TYN L+  F    R++ A  +   M 
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
               +   F+        CK  +   AL+L     ++   PD V +  L  GL E    E
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFE 319

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A    + M+      +  TY T + G      +     + + + +  C    + +NSL+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379

Query: 352 DGLCKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQ------MDKARDLFLD 404
              C SG    A +L + +  CG + P  V Y+I+IG +C D        +D A   + +
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           M    VV N I      R      +  K   ++ +M     +PD S  S V++ L
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 3/225 (1%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++L+  +C+N     AL     +     +P    +N L     +  +++ A  +  EM  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D +T R F   LCK G   EA+ L  T   +    D   Y  LI GLC++   E 
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVP---DTVFYTKLISGLCEASLFEE 320

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A++    +     +PNVVTYS ++ G  N  Q+ + + +   M      P+   F+ L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
            +    + S   +LL KM +   MP   + +I++  +  ++ SLN
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 102/257 (39%), Gaps = 65/257 (25%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL- 68
           VL ++L++   P+ V +T +I GLC   +  EA  L   +   GC+P+V TYT +++G  
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 69  ----------------------------------CRTSHTIVALNLFEEMANG------- 87
                                             C+     VA NL EEM          
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850

Query: 88  ---------NGEF----GVVCE-------PNTVTYTTIIDGLCKEGFVDKAKELLLQMK- 126
                    N EF    G++ E       P    Y  +ID L K   ++ A  LL ++  
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910

Query: 127 -DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
               +     TY S+I   C A     A +LF EM  +GV P + +F  ++  L +N K+
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970

Query: 186 DEASRLLDLMIQHGVRP 202
            EA  LLD  I H V P
Sbjct: 971 SEALLLLDF-ISHMVCP 986


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 207/408 (50%), Gaps = 9/408 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   +  +L+ GL    R+  A   F         PD++T+ T+++GLCR      A ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE---LLLQMKDKNIKPNVVTY 137
            +++      +G+   P+  TY ++IDG CK+G          LL +M +  I P  VT+
Sbjct: 214 AKDIK----AWGLA--PSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTF 267

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G+C   +   A R+F EM  QG+  +VVT+N ++  LC  GK++E  +L++ M  
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ P+  T+  +L GFC  G +  A +    M     +  V  Y+ILI+ Y +  ++E 
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A+++   M  KGI P+V  +N L  G         A  L DEM+  G+ AD  TY   I 
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC  G + +AV+L   +  +  E +   YN++I G C  G ++ A E+   +       
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           NVVTY++ I   C  G+MD+A DL  +M +  +VPN IT++ +  G +
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 188/382 (49%), Gaps = 9/382 (2%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           L+   +PD  TF ++I GLC   ++ +A  +   ++ +G  P V TY +L++G C+    
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242

Query: 75  IVALN---LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
               +   L +EM     E G+   P  VT+  +I+G CK      A  +  +MK + I 
Sbjct: 243 GNMYHVDMLLKEMV----EAGI--SPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIA 296

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
            +VVTY S+I G C      E  +L  EM D G+ PN +TF  ++   CK G M +A+  
Sbjct: 297 ASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDW 356

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           +D M +  V PD   YN L+D +   G++  A  +  +M   G    V +Y+ LI G+ +
Sbjct: 357 IDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           + +   A  L  EM  KGI+ DVV +N L   L    +V +A KL DEM   G+  +  T
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T I G C  G I  A E+   +   +   ++  YN  I   C+ G+++ A +L   + 
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 372 CGVLVPNVVTYSIMIGGLCNDG 393
              LVPN +TY  +  G+   G
Sbjct: 537 DKCLVPNGITYETIKEGMMEKG 558



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 183/356 (51%), Gaps = 3/356 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY---AKDWNEA 153
           P+  T+ T+I GLC+ G + KA ++   +K   + P+V TY S+I G+C    A +    
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             L  EM++ G+ P  VTF V+++  CKN     A R+ + M Q G+     TYN+L+ G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C  G+V    +L   ME +G      ++  ++ G+CK   +  A      M  + ++PD
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           VVI+N L      + ++E A  + + M + G++ +  TY   I G  ++G    A  L  
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            ++    E D+  YN LI  LC  G +  A++L   +    L PN +TY+ +I G C+ G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
            +  A ++   ME+     NV+T+++ I+ F +I +  +  +LL++M +  ++P+ 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 167/321 (52%), Gaps = 3/321 (0%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +P+  +  +++ G   AK  + A++ F   + + V P++ TFN ++  LC+ G++ +A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCL---TGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           +   +   G+ P   TYN+L+DG+C     G + H   L   M   G   T  ++ +LIN
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           GYCKN     A+ ++ EM  +GI   VV +N+L  GL    +VE   KL +EM+  G++ 
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +  T+   + G CK G + +A +    +     E D+  YN LID   + G++E A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            ++    + PNV TY+ +I G    G    A  L  +M+E  +  +V+T+++LI      
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 428 NEPSKVIELLHKMKEINVMPD 448
            E  K ++LL +M E+ + P+
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPN 473



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 160/323 (49%), Gaps = 6/323 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + H  ++L  ++++  +P AVTF  LI G C  S    A  +F +++  G    V TY
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L++GLC        + L EEM     + G+   PN +T+  ++ G CK+G +  A + 
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEME----DLGL--SPNEITFGCVLKGFCKKGMMADANDW 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M ++N++P+VV Y  +I  +       +A  +   M  +G+ PNV T+N ++    +
Sbjct: 357 IDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G    AS LLD M + G+  D  TYN L+   C  G V  A +L   M  +G +    +
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I G+C    I+ A  + + M     + +VV +N       +I +++ A  L +EM 
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 302 RNGVAADTWTYRTFIDGLCKNGY 324
              +  +  TY T  +G+ + GY
Sbjct: 537 DKCLVPNGITYETIKEGMMEKGY 559



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 9/300 (3%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +P+  + N ++  L    ++D A +     ++  V PD +T+NT++ G C  G++  A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY------SEMLSKGIKPDVVIHNT 279
           +   +++ G   +V +Y+ LI+GYCK     GA ++Y       EM+  GI P  V    
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G  +      A ++F+EM++ G+AA   TY + I GLC  G + E V+L   +  L 
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              +   +  ++ G CK G +  A +    +    + P+VV Y+I+I      G+M+ A 
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +   M +  + PNV T++ LI GF R  +      LL +MKE  +  D    ++++  L
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 6/212 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V +  LI       ++ +A A+   +   G  P+V TY  L+ G  R+     A  L
Sbjct: 367 PDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM     E G+  E + VTY  +I  LC +G V KA +LL +M +  ++PN +TY ++
Sbjct: 427 LDEMK----EKGI--EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I+GFC   +   A  +   M     + NVVT+NV +   C+ GKMDEA+ LL+ M+   +
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
            P+  TY T+ +G    G     +   VS  S
Sbjct: 541 VPNGITYETIKEGMMEKGYTPDIRGCTVSQAS 572



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 6/183 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V   + K   +P+  T+  LI G         A+ L  +++  G E DV T
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+  LC       A+ L +EM+    E G+  EPN +TY TII G C +G +  A E
Sbjct: 442 YNVLIGALCCKGEVRKAVKLLDEMS----EVGL--EPNHLTYNTIIQGFCDKGNIKSAYE 495

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M+    + NVVTY   I+ FC     +EA  L  EM+D+ + PN +T+  I + + 
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555

Query: 181 KNG 183
           + G
Sbjct: 556 EKG 558



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 3/134 (2%)

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+L+ GL  + R+++A + FRS     + P++ T++ +I GLC  GQ+ KA D+  D++ 
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIE---LLHKMKEINVMPDASIVSIVVDLLAKNEI 464
             + P+V T++ LI G+ +      +     LL +M E  + P A    ++++   KN  
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 465 SLNSLPSFTVHEQQ 478
           +  ++  F   +QQ
Sbjct: 280 TAAAVRVFEEMKQQ 293


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 227/482 (47%), Gaps = 57/482 (11%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F++   + +     D  T+T ++   C    I +A   F ++R  GC P+V TYT L++
Sbjct: 461 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 520

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM- 125
              +      A  LFE M +        C PN VTY+ +IDG CK G V+KA ++  +M 
Sbjct: 521 AYLKAKKVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQVEKACQIFERMC 574

Query: 126 ---------------KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
                           D + +PNVVTY +++ GFC +    EA++L   M  +G +PN +
Sbjct: 575 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 634

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            ++ ++D LCK GK+DEA  +   M +HG     +TY++L+D +    R + A ++   M
Sbjct: 635 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 694

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
               C   V  Y+ +I+G CK  + + A  L   M  KG +P+VV +  +  G   I ++
Sbjct: 695 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 754

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF----------HTLRILKC 340
           E   +L + M   GVA +  TYR  ID  CKNG +  A  L           HT    K 
Sbjct: 755 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 814

Query: 341 ------EFD-----------------IRAYNSLIDGLCKSGRLEIALELFRSLP--CGVL 375
                 EF                  +  Y  LID L K+ RLE+AL L   +      L
Sbjct: 815 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 874

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           V    TY+ +I  LC   +++ A  LF +M +  V+P + +F  LI+G  R ++ S+ + 
Sbjct: 875 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 934

Query: 436 LL 437
           LL
Sbjct: 935 LL 936



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 236/530 (44%), Gaps = 86/530 (16%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL---------- 68
           F PD V +T LI GLC  S   EA     ++R   C P+V TY+TL+ G           
Sbjct: 257 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 316

Query: 69  ----------CRTSHTIVALNLFEEMANGNGEFG-------VVCE--PNTVTYTTIIDGL 109
                     C  S  I    +     +G+  +        V C   P  V Y  +I  +
Sbjct: 317 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 376

Query: 110 CKE------GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           C +        +D A++   +M    +  N +  +S  R  C A  + +A  +  EM+ Q
Sbjct: 377 CGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 436

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G  P+  T++ +++ LC   KM+ A  L + M + G+  D +TY  ++D FC  G +  A
Sbjct: 437 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 496

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           ++ F  M  +GC   V +Y+ LI+ Y K K++  A  L+  MLS+G  P++V ++ L  G
Sbjct: 497 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 556

Query: 284 LFEIHQVERAFKLFDEM----------------QRNGVAADTWTYRTFIDGLCKNGYIVE 327
             +  QVE+A ++F+ M                  N    +  TY   +DG CK+  + E
Sbjct: 557 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 616

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL--------------------- 366
           A +L   + +  CE +   Y++LIDGLCK G+L+ A E+                     
Sbjct: 617 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 676

Query: 367 ------FRSLPCGVL--------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
                  + L   VL         PNVV Y+ MI GLC  G+ D+A  L   MEE    P
Sbjct: 677 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 736

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           NV+T+  +I GF  I +    +ELL +M    V P+     +++D   KN
Sbjct: 737 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 786



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 226/482 (46%), Gaps = 31/482 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  S     LGR+    F P   T+  LI+      R+  A+ +  ++ +     D FT 
Sbjct: 173 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 232

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
                 LC+      AL L E       E  V   P+TV YT +I GLC+    ++A + 
Sbjct: 233 RCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCEASLFEEAMDF 283

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+  +  PNVVTY++++ G    K     KR+   MM +G  P+   FN ++   C 
Sbjct: 284 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 343

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR------VNHAKELFVSMESMGC 235
           +G    A +LL  M++ G  P    YN L+   C          ++ A++ +  M + G 
Sbjct: 344 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGV 403

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                + S      C   + E A S+  EM+ +G  PD   ++ +   L    ++E AF 
Sbjct: 404 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 463

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           LF+EM+R G+ AD +TY   +D  CK G I +A + F+ +R + C  ++  Y +LI    
Sbjct: 464 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 523

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF-----------LD 404
           K+ ++  A ELF ++     +PN+VTYS +I G C  GQ++KA  +F           +D
Sbjct: 524 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 583

Query: 405 M-----EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           M     ++N+  PNV+T+  L+ GF + +   +  +LL  M      P+  +   ++D L
Sbjct: 584 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 643

Query: 460 AK 461
            K
Sbjct: 644 CK 645



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 168/357 (47%), Gaps = 45/357 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+ +L+ G C   R+ EA  L   + + GCEP+   Y  L++GLC+      A  +
Sbjct: 596 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655

Query: 81  FEEMANG-------------NGEFGV----------------VCEPNTVTYTTIIDGLCK 111
             EM+               +  F V                 C PN V YT +IDGLCK
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G  D+A +L+  M++K  +PNVVTYT++I GF           L   M  +GV PN VT
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM- 230
           + V++D  CKNG +D A  LL+ M Q         Y  +++GF         KE   S+ 
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--------NKEFIESLG 827

Query: 231 --ESMGCKHT---VFSYSILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIHNTLFVG 283
             + +G   T   +  Y +LI+   K + +E AL L  E+   S  +      +N+L   
Sbjct: 828 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 887

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
           L   ++VE AF+LF EM + GV  +  ++ + I GL +N  I EA+ L   +  + C
Sbjct: 888 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 944



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 176/450 (39%), Gaps = 52/450 (11%)

Query: 50  RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGE-FGVVCEPNTVTYTTIIDG 108
           R  G +     Y  LV+ + R     V     +++ + + E FG            ++  
Sbjct: 116 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQF-------LNVLVRK 168

Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            C+ G    A E L ++KD   +P+  TY  +I+ F  A   + A  +  EM    ++ +
Sbjct: 169 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 228

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
             T       LCK GK  EA   L L+      PD   Y  L+ G C       A +   
Sbjct: 229 GFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 285

Query: 229 SMESMGCKHTVFSYSILING-----------------------------------YCKNK 253
            M +  C   V +YS L+ G                                   YC + 
Sbjct: 286 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 345

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGL------FEIHQVERAFKLFDEMQRNGVAA 307
           +   A  L  +M+  G  P  V++N L   +           ++ A K + EM   GV  
Sbjct: 346 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVL 405

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           +     +F   LC  G   +A  +   +       D   Y+ +++ LC + ++E+A  LF
Sbjct: 406 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 465

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +  G LV +V TY+IM+   C  G +++AR  F +M E    PNV+T+  LI  +++ 
Sbjct: 466 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 525

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            + S   EL   M     +P+    S ++D
Sbjct: 526 KKVSYANELFETMLSEGCLPNIVTYSALID 555



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 117/295 (39%), Gaps = 11/295 (3%)

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
            NV++ + C+NG    A   L  +     RP   TYN L+  F    R++ A  +   M 
Sbjct: 162 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 221

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
               +   F+        CK  +   AL+L     ++   PD V +  L  GL E    E
Sbjct: 222 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFE 278

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A    + M+      +  TY T + G      +     + + + +  C    + +NSL+
Sbjct: 279 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 338

Query: 352 DGLCKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQ------MDKARDLFLD 404
              C SG    A +L + +  CG + P  V Y+I+IG +C D        +D A   + +
Sbjct: 339 HAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSE 397

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           M    VV N I      R      +  K   ++ +M     +PD S  S V++ L
Sbjct: 398 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 452



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 3/225 (1%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++L+  +C+N     AL     +     +P    +N L     +  +++ A  +  EM  
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D +T R F   LCK G   EA+ L  T   +    D   Y  LI GLC++   E 
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVP---DTVFYTKLISGLCEASLFEE 279

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A++    +     +PNVVTYS ++ G  N  Q+ + + +   M      P+   F+ L+ 
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
            +    + S   +LL KM +   MP   + +I++  +  ++ SLN
Sbjct: 340 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 384



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 102/257 (39%), Gaps = 65/257 (25%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL- 68
           VL ++L++   P+ V +T +I GLC   +  EA  L   +   GC+P+V TYT +++G  
Sbjct: 690 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 749

Query: 69  ----------------------------------CRTSHTIVALNLFEEMANG------- 87
                                             C+     VA NL EEM          
Sbjct: 750 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 809

Query: 88  ---------NGEF----GVVCE-------PNTVTYTTIIDGLCKEGFVDKAKELLLQMK- 126
                    N EF    G++ E       P    Y  +ID L K   ++ A  LL ++  
Sbjct: 810 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 869

Query: 127 -DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
               +     TY S+I   C A     A +LF EM  +GV P + +F  ++  L +N K+
Sbjct: 870 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 929

Query: 186 DEASRLLDLMIQHGVRP 202
            EA  LLD  I H V P
Sbjct: 930 SEALLLLDF-ISHMVCP 945


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 221/435 (50%), Gaps = 12/435 (2%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            +++  F  D  T T +I   C +S +  A   F K+   G  P++  Y+++++GLC+   
Sbjct: 857  MMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGS 916

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKP 132
               A  L EEM   NG      +PN  T+T++I GLCK+G+ ++A  L L++ +  N KP
Sbjct: 917  VKQAFELLEEMVK-NG-----WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKP 970

Query: 133  NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            NV TYT++I G+C  +  + A+ LF  M +QG+ PN  T+  ++D  CK G   +A  L+
Sbjct: 971  NVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM 1030

Query: 193  DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
            +LM   G  P+  TYN+++DG C  GR   A +L  +      +    +Y+ILI+  CK 
Sbjct: 1031 ELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKR 1090

Query: 253  KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             ++  AL   ++M   G +PD+ ++ TL       + ++ + KLFDE+ + G+A    TY
Sbjct: 1091 ADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETY 1150

Query: 313  RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
             + I G C+   +  AV+ F  +    C  D  +Y +LI GLCK  RL+ A +L+ ++  
Sbjct: 1151 TSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMID 1210

Query: 373  GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
              L P  VT   +    C       A  +   + +   +  V T   LIR      + + 
Sbjct: 1211 KGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHT---LIRKLCCEKKVAL 1267

Query: 433  VIELLHKM--KEINV 445
                 HK+  KE+NV
Sbjct: 1268 AALFFHKLLDKEVNV 1282



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 177/332 (53%), Gaps = 5/332 (1%)

Query: 4    VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
            V+       ++ K   +P+ + ++S+I GLC    + +A  L  ++   G +P+V+T+T+
Sbjct: 882  VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 941

Query: 64   LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
            L++GLC+   T  A  LF ++   +       +PN  TYT +I G CKE  + +A+ L  
Sbjct: 942  LIHGLCKKGWTERAFRLFLKLIRSDNY-----KPNVHTYTAMISGYCKEEKLSRAEMLFE 996

Query: 124  QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            +MK++ + PN  TYT++I G C A ++++A  L   M ++G  PN  T+N I+D LCK G
Sbjct: 997  RMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRG 1056

Query: 184  KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            + +EA +LL+   Q+ +  D  TY  L+   C    +N A      M  +G +  +  Y+
Sbjct: 1057 RAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYT 1116

Query: 244  ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
             LI  +C+   ++ +  L+ E++  G+ P    + ++  G     +V  A K F +M  +
Sbjct: 1117 TLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDH 1176

Query: 304  GVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            G A D+ +Y   I GLCK   + EA +L+ T+
Sbjct: 1177 GCAPDSISYGALISGLCKESRLDEARQLYDTM 1208



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 186/370 (50%), Gaps = 10/370 (2%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFT 60
            G V   F +L  ++K+ + P+  T TSLI GLC +     A  LF KL R    +P+V T
Sbjct: 915  GSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHT 974

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            YT +++G C+      A  LFE M     E G+V  PNT TYTT+IDG CK G   KA E
Sbjct: 975  YTAMISGYCKEEKLSRAEMLFERMK----EQGLV--PNTNTYTTLIDGHCKAGNFSKAYE 1028

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L+  M ++   PN  TY S++ G C      EA +L        ++ + VT+ +++ E C
Sbjct: 1029 LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQC 1088

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            K   M++A   L+ M + G +PD   Y TL+  FC    +  +++LF  +  +G   T  
Sbjct: 1089 KRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKE 1148

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +Y+ +I GYC+ K++  A+  + +M   G  PD + +  L  GL +  +++ A +L+D M
Sbjct: 1149 TYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTM 1208

Query: 301  QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               G++    T  T     CK      A+ +   L  L  +  IR  ++LI  LC   ++
Sbjct: 1209 IDKGLSPCEVTRVTLTYEYCKTEDFASAMVI---LERLNKKLWIRTVHTLIRKLCCEKKV 1265

Query: 361  EIALELFRSL 370
             +A   F  L
Sbjct: 1266 ALAALFFHKL 1275



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 200/417 (47%), Gaps = 8/417 (1%)

Query: 33   LCAESRIME-AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF 91
            + AE R++E A  +F ++   G  PD  TY  ++ G CR  + + A     EM     E 
Sbjct: 805  VAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMM----ER 860

Query: 92   GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
            G V +    T T II   C++  V++A     ++    + PN++ Y+S+I G C      
Sbjct: 861  GFVVD--NATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVK 918

Query: 152  EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL-LDLMIQHGVRPDAFTYNTL 210
            +A  L  EM+  G +PNV T   ++  LCK G  + A RL L L+     +P+  TY  +
Sbjct: 919  QAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAM 978

Query: 211  LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
            + G+C   +++ A+ LF  M+  G      +Y+ LI+G+CK      A  L   M ++G 
Sbjct: 979  ISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGF 1038

Query: 271  KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
             P+   +N++  GL +  + E AFKL +   +N + AD  TY   I   CK   + +A+ 
Sbjct: 1039 FPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALV 1098

Query: 331  LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
              + +  +  + DI  Y +LI   C+   ++ + +LF  +    L P   TY+ MI G C
Sbjct: 1099 FLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC 1158

Query: 391  NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
             + ++  A   F  M ++   P+ I++  LI G  + +   +  +L   M +  + P
Sbjct: 1159 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 1215



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 170/357 (47%), Gaps = 1/357 (0%)

Query: 113  GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
            G + +A +++L M+++ +         +I      +    A  +F EM  +GV P+  T+
Sbjct: 775  GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 834

Query: 173  NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
              I+   C+NG + EA R +  M++ G   D  T   ++  FC    VN A   F  +  
Sbjct: 835  KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894

Query: 233  MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            MG    + +YS +I+G CK   ++ A  L  EM+  G KP+V  H +L  GL +    ER
Sbjct: 895  MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 954

Query: 293  AFKLFDEMQR-NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            AF+LF ++ R +    +  TY   I G CK   +  A  LF  ++      +   Y +LI
Sbjct: 955  AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 1014

Query: 352  DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            DG CK+G    A EL   +      PN  TY+ ++ GLC  G+ ++A  L     +N + 
Sbjct: 1015 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 1074

Query: 412  PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
             + +T+ +LI    +  + ++ +  L+KM ++   PD  + + ++    +  +  +S
Sbjct: 1075 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDS 1131



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 1/245 (0%)

Query: 214  FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            F   G++  A ++ + M + G   T    + +I    + + +E A +++ EM ++G+ PD
Sbjct: 771  FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830

Query: 274  VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
               +  + VG      V  A +   EM   G   D  T    I   C+   +  AV  FH
Sbjct: 831  SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890

Query: 334  TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
             +  +    ++  Y+S+I GLCK G ++ A EL   +      PNV T++ +I GLC  G
Sbjct: 891  KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 950

Query: 394  QMDKARDLFLDM-EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
              ++A  LFL +   +   PNV T+  +I G+ +  + S+   L  +MKE  ++P+ +  
Sbjct: 951  WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 1010

Query: 453  SIVVD 457
            + ++D
Sbjct: 1011 TTLID 1015


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 216/432 (50%), Gaps = 24/432 (5%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+ D  +F  L+  LC     + +A L  +LR +G  P       +++ L        A+
Sbjct: 200 FSSDPASFDFLL--LC-----LPSAPLLRRLRQYGISPSPEACNAVLSRLPLDE----AI 248

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF+E+ + N     VC     +Y  ++  LC  G V  A++L  +M      P+VVTY 
Sbjct: 249 ELFQELPHKN-----VC-----SYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYG 295

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G C   +   A +L  EM+  GV+PN   +  ++  LC  G + +A R+++ M+Q 
Sbjct: 296 ILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQR 355

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            V  D   Y T+L GFC  G +  A+  F  M+  G      +Y+ +ING C+  E+E A
Sbjct: 356 KVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEA 415

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L  EM ++ +  D V +  L  G  +  ++  AF++ + M + GV  +  TY    DG
Sbjct: 416 EKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDG 475

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G +  A EL H +     E +   YNSLI+GLCK+G LE A+     +    L P+
Sbjct: 476 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPD 535

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V TY+ +I  LC  G +D+A  L  +M +  + P ++T+++L+ GF          +LL 
Sbjct: 536 VYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLD 595

Query: 439 KMKEINVMPDAS 450
            M E N+ P+A+
Sbjct: 596 WMLEKNIHPNAA 607



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 222/439 (50%), Gaps = 9/439 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           ++  L+K LC   R+ +A  LF ++      PDV TY  L++G C       A+ L +EM
Sbjct: 261 SYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLLDEM 317

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
             G    GV  EPN   YT+++  LC +G++  A  ++  M  + +  +   YT+V+ GF
Sbjct: 318 VAG----GV--EPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGF 371

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C   D   A+R F EM  +G+  + VT+  +++ LC+  +++EA +LL  M    +  D 
Sbjct: 372 CNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDE 431

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  L+DG+C  G++  A ++  +M   G    V +Y+ L +G CK  +++ A  L  E
Sbjct: 432 VTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHE 491

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M +KG++ +   +N+L  GL +   +E+A +   +M    +  D +TY T ID LCK+G 
Sbjct: 492 MSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGD 551

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  A  L   +     +  I  YN L++G C SGR+E   +L   +    + PN  TY+ 
Sbjct: 552 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNS 611

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           ++   C +  M    +++  M    V PN  T+++LI+G  +     + +    +M +  
Sbjct: 612 LMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKG 671

Query: 445 VMPDASIVSIVVDLLAKNE 463
               A+  S ++ LL K +
Sbjct: 672 FRLTATSYSALIRLLNKKK 690



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 208/421 (49%), Gaps = 6/421 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G + +   +L  ++     P+A  +TS++  LC +  I +A  +   +       D   
Sbjct: 304 LGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEAL 363

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YTT+++G C     + A   F+EM       G+  +   VTYTT+I+GLC+   +++A++
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEMQRK----GLATD--GVTYTTMINGLCRAVELEEAEK 417

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  + +  + VTYT +I G+C      EA ++   M+ +GV PNVVT+  + D LC
Sbjct: 418 LLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLC 477

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +  A+ LL  M   G+  +A TYN+L++G C  G +  A      M++   K  V+
Sbjct: 478 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVY 537

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+  CK+ +++ A SL  EML KGIKP +V +N L  G     +VE   KL D M
Sbjct: 538 TYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWM 597

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               +  +  TY + +   C    +    E++  +R      +   YN LI G CK+  +
Sbjct: 598 LEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNM 657

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + AL     +          +YS +I  L    +  +AR+LF DM +  +      +D  
Sbjct: 658 KEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFY 717

Query: 421 I 421
           I
Sbjct: 718 I 718



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 174/347 (50%), Gaps = 10/347 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+T++I GLC    + EA  L  ++     + D  TYT L++G C+      A    
Sbjct: 395 DGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAF--- 451

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M N   + GV   PN VTYT + DGLCK+G V  A ELL +M +K ++ N  TY S+I
Sbjct: 452 -QMHNAMVQRGVT--PNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLI 508

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C A    +A R   +M    ++P+V T+  ++D LCK+G +D A  LL  M+  G++
Sbjct: 509 NGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIK 568

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P   TYN L++GFC++GRV   K+L   M          +Y+ L+  YC    ++    +
Sbjct: 569 PTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEI 628

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           Y  M S+ + P+   +N L  G  +   ++ A    DEM + G      +Y   I  L K
Sbjct: 629 YKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNK 688

Query: 322 NGYIVEAVELFHTLRI--LKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
               VEA ELFH +R   L  E D+  Y+  ID       LE  L L
Sbjct: 689 KKKFVEARELFHDMRKEGLTAESDV--YDFYIDLNFNEDNLESTLAL 733



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 6/299 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++  F +   +++   TP+ VT+T+L  GLC +  +  A  L  ++   G E +  TY
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTY 504

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC+  +   A+    +M           +P+  TYTT+ID LCK G +D+A  L
Sbjct: 505 NSLINGLCKAGYLEQAMRTMADMDTA------CLKPDVYTYTTLIDALCKSGDLDRAHSL 558

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M DK IKP +VTY  ++ GFC +      K+L   M+++ + PN  T+N +M + C 
Sbjct: 559 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCI 618

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              M   + +   M    V P+  TYN L+ G C    +  A      M   G + T  S
Sbjct: 619 ENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATS 678

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           YS LI    K K+   A  L+ +M  +G+  +  +++      F    +E    L DE+
Sbjct: 679 YSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDEL 737



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 164/342 (47%), Gaps = 11/342 (3%)

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +++   I P+     +V+         +EA  LF E+  +    NV ++N+++  LC
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLKALC 270

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G++ +A +L D M      PD  TY  L+ G C  G + +A +L   M + G +    
Sbjct: 271 DAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ ++   C    I  AL +  +M+ + +  D  ++ T+  G      +  A + FDEM
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           QR G+A D  TY T I+GLC+   + EA +L   +   + + D   Y  LIDG CK G++
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             A ++  ++    + PNVVTY+ +  GLC  G +  A +L  +M    +  N  T++ L
Sbjct: 448 AEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 507

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           I G  +     + +  +  M    + PD    + ++D L K+
Sbjct: 508 INGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKS 549


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 208/400 (52%), Gaps = 9/400 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+ ++F  +IK LC    +  A  +F  +    C PD +TY TL++GLC+      A+ 
Sbjct: 184 SPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVL 243

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +EM +        C P+ V Y  +IDGLCK+G + +  +L+  M  K   PN VTY +
Sbjct: 244 LLDEMQSEG------CSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNT 297

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C     ++A  L   M+     PN VT+  +++ L K  +  + +RLL  M + G
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERG 357

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            R +   Y+ L+ G    G+   A  L+  M   GC+  +  YS +I+G C+  +   A 
Sbjct: 358 YRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAK 417

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            + + M+S G  P+V  +++L  G F+    E A +++ EM   G + + + Y   IDGL
Sbjct: 418 EILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGL 477

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC---GVLV 376
           C  G + EA+ ++  +  +  + D  AY+S+I GLC  G ++ AL+L+  + C       
Sbjct: 478 CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQ 537

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           P+VVTY+I++ GLC    + +A DL   M +    P+VIT
Sbjct: 538 PDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVIT 577



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 217/420 (51%), Gaps = 9/420 (2%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+  ++  ++  LC+      A+ +F  M          C P+  TY T++DGLCKE  +
Sbjct: 185 PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKK------CLPDGYTYCTLMDGLCKEERI 238

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A  LL +M+ +   P+ V Y  +I G C   D +   +L   M  +G  PN VT+N +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTL 298

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LC  GK+D+A  LL+ M+     P+  TY TL++G     R      L +SME  G 
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGY 358

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +     YS+LI+G  K  + E A++L+ +M  KG +P++V+++ +  GL    +   A +
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + + M  +G   + +TY + + G  K G   EA++++  +    C  +   Y+ LIDGLC
Sbjct: 419 ILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM---EENAVVP 412
             GR++ A+ ++  +    + P+ V YS MI GLC  G MD A  L+ +M   EE    P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           +V+T+++L+ G     + S+ ++LL+ M +    PD    +  ++ L++   S     SF
Sbjct: 539 DVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSF 598



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 213/442 (48%), Gaps = 66/442 (14%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C  PD  T+ +L+ GLC E RI EA  L  +++  GC P    Y  L++GLC+     
Sbjct: 216 KKCL-PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLS 274

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
               L + M      F   C PN VTY T+I GLC +G +DKA  LL +M      PN V
Sbjct: 275 RVTKLVDNM------FLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDV 328

Query: 136 TYTSVIRGFCYAKDWNEAKRLFI-----------------------------------EM 160
           TY ++I G    +   +  RL I                                   +M
Sbjct: 329 TYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKM 388

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            ++G +PN+V ++ ++D LC+ GK +EA  +L+ MI  G  P+ +TY++L+ GF  TG  
Sbjct: 389 AEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLS 448

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A +++  M+  GC    F YS+LI+G C    ++ A+ ++S+ML+ GIKPD V ++++
Sbjct: 449 EEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSM 508

Query: 281 FVGLFEIHQVERAFKLFDEM---QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             GL  I  ++ A KL+ EM   +      D  TY   +DGLC    +  AV+L + +  
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLD 568

Query: 338 LKCEFDIRAYNSLIDGL------CKSGRL---EIALELFR----SLPCGV--------LV 376
             C+ D+   N+ ++ L      C+ GR    E+   L +    S  C +        L 
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLA 628

Query: 377 PNVVTYSIMIGGLCNDGQMDKA 398
           P   T+++++  +C   +++ A
Sbjct: 629 PKTSTWAMIVPEICKPKKINAA 650



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 134/274 (48%), Gaps = 23/274 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +  ++ +    P+ V ++++I GLC E +  EA  +   +   GC P+V+TY
Sbjct: 376 GKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTY 435

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L+ G  +T  +  A+ ++ EM     E G  C  N   Y+ +IDGLC  G V +A  +
Sbjct: 436 SSLMKGFFKTGLSEEAIQVWREM----DETG--CSRNEFCYSVLIDGLCGVGRVKEAMMV 489

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ---GVQPNVVTFNVIMDE 178
             +M    IKP+ V Y+S+I+G C     + A +L+ EM+ Q     QP+VVT+N+++D 
Sbjct: 490 WSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LC    +  A  LL+ M+  G  PD  T NT L+               +S +S  C+  
Sbjct: 550 LCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNT--------------LSEKSDSCEEG 595

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
                 L+    K + + GA  +   ML K + P
Sbjct: 596 RSFLEELVARLLKRQRVSGACKIVEVMLGKYLAP 629



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 116/244 (47%), Gaps = 5/244 (2%)

Query: 223 AKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG----IKPDVVIH 277
           A +LF  M +   CK +V S++ ++N           L  Y  +++      I P+ +  
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSF 190

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N +   L ++  V+RA ++F  M       D +TY T +DGLCK   I EAV L   ++ 
Sbjct: 191 NLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
             C      YN LIDGLCK G L    +L  ++      PN VTY+ +I GLC  G++DK
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDK 310

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A  L   M  +  +PN +T+  LI G ++         LL  M+E     +  I S+++ 
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLIS 370

Query: 458 LLAK 461
            L K
Sbjct: 371 GLFK 374



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 25/192 (13%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPD 57
           +GRV    +V  ++L     PD V ++S+IKGLC    +  A  L+ ++        +PD
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC-KEGFVD 116
           V TY  L++GLC       A++L   M +        C+P+ +T  T ++ L  K    +
Sbjct: 540 VVTYNILLDGLCMQKDVSRAVDLLNCMLDRG------CDPDVITCNTFLNTLSEKSDSCE 593

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           + +  L ++  + +K   V+      G C         ++   M+ + + P   T+ +I+
Sbjct: 594 EGRSFLEELVARLLKRQRVS------GAC---------KIVEVMLGKYLAPKTSTWAMIV 638

Query: 177 DELCKNGKMDEA 188
            E+CK  K++ A
Sbjct: 639 PEICKPKKINAA 650


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/406 (33%), Positives = 201/406 (49%), Gaps = 41/406 (10%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL---------------- 68
           ++T+++ GLC +  ++ A AL  +L   G +P V TY TL+NG                 
Sbjct: 194 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLM 253

Query: 69  -------------------CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL 109
                               R+S    A  LF+EM           EP+   YT+II+  
Sbjct: 254 EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKG------IEPDVYIYTSIINWN 307

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           CK G + +A  L  +M ++ + PN  TY ++I G C A +   A+ +  +M  +GV  N 
Sbjct: 308 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNR 367

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           V FN +MD  CK G +DEA RL ++M Q G   DAFT N +  GFC + R   AK L ++
Sbjct: 368 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 427

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           ME  G    V S+SILI+ YCK +    A  L+  M  KG  P VV +N       +  +
Sbjct: 428 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 487

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           +E A+KL +EMQ  G+  DT+TY + IDG   +G +  A+ELF+ +  L    ++  Y  
Sbjct: 488 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 547

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +I GL K GR + A +L+  +    +VP+   YS +I  L   G +
Sbjct: 548 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 209/412 (50%), Gaps = 12/412 (2%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGL 109
           G E  V ++T +V+GLC+    + A  L +E+         VC+   P+ +TY T+++G 
Sbjct: 187 GIEIRVCSWTAVVDGLCKKGEVVRAKALMDEL---------VCKGFKPSVITYNTLLNGY 237

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
            +   V    E+L  M+   +  NV TYT +I  +  +    EA++LF EM+ +G++P+V
Sbjct: 238 IEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDV 297

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
             +  I++  CK G M  A  L D M +  + P+A+TY  L++G C  G +  A+ +   
Sbjct: 298 YIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVND 357

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M+S G       ++ L++GYCK   I+ AL L + M  KG + D    N +  G    ++
Sbjct: 358 MQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNR 417

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            E A +L   M+  GVA +  ++   ID  CK     EA  LF  +        +  YN+
Sbjct: 418 REEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNA 477

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
            I+  CK G++E A +L   +    L+P+  TY+ +I G    G +D+A +LF +M +  
Sbjct: 478 FIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLG 537

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  NV+T+ ++I G  +     +  +L  +M +  ++PD  I S ++  L K
Sbjct: 538 LNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 589



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 143/300 (47%)

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L ++G M+     L  M+  G+     ++  ++DG C  G V  AK L   +   G K +
Sbjct: 167 LKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPS 226

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +Y+ L+NGY + K++ G   + S M    +  +V  +  L        ++E A KLFD
Sbjct: 227 VITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFD 286

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM + G+  D + Y + I+  CK G +  A  LF  +   +   +   Y +LI+G CK+G
Sbjct: 287 EMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAG 346

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            ++ A  +   +    +  N V ++ ++ G C  G +D+A  L   M++     +  T +
Sbjct: 347 EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCN 406

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           ++  GF R N   +   LL  M+E  V P+    SI++D+  K +    +   F V E++
Sbjct: 407 IIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKK 466


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 224/430 (52%), Gaps = 10/430 (2%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L++   P+A+ + +LI  LC    + EA +   ++    C P+V +Y  +++G C+  +
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              AL    EM     E G    P    Y++I+   CK G V KA ++  +M  K  +P+
Sbjct: 60  IEKALAFLREME----ELGH--PPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPD 113

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           +V +  ++ G   A+  +EA+ LF  M  +G +P+VVT+N ++  LCK  K+DEA  LL+
Sbjct: 114 IVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLE 173

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M Q  V P   TY TL+D  C   R+  A E+F  M    C  T  +YS+L N   +  
Sbjct: 174 RMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAG 233

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH--QVERAFKLFDEMQRNGVAADTWT 311
           ++  A  +YS+M  K +      ++ + +GL ++    VE A KL  EM    +A D + 
Sbjct: 234 KLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAA-KLVTEMMGKKIAPDFYA 292

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   I+GLCK     EA E+F  +R       +  YN+L++GL  + +L+ A+EL   + 
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML 352

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
               +P+  +Y++MI G C +G  ++A  LF DM ++ +V N  T++ +I GFI+    S
Sbjct: 353 DQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWS 412

Query: 432 KVIELLHKMK 441
               L  +M+
Sbjct: 413 SAWMLFKRMQ 422



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 211/442 (47%), Gaps = 11/442 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    ++S+++  C    + +A  +F ++   GCEPD+  +  L++GL R      A  L
Sbjct: 77  PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 136

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  M N  G     C+P+ VTY T+I GLCK   +D+A  LL +MK +++ P  VTYT++
Sbjct: 137 FRSM-NSRG-----CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 190

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I   C      +A  +F +M +         ++V+ ++L + GK+ EASR+   M +  V
Sbjct: 191 IDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNV 250

Query: 201 RPDAFTYNTLLDGFC-LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
                TY+ ++ G   + G    A +L   M         ++YSILING CK +    A 
Sbjct: 251 CMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAK 310

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++ EM  +GI P VV +NTL  GL    +++ A +L   M   G   DT +Y   I G 
Sbjct: 311 EMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGF 370

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG----VL 375
           C NG   EA  LF  +       +   YN +I G  K      A  LF+ +  G    V 
Sbjct: 371 CANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVP 430

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN+ TY I+I  LC   Q+++A  L   M +   VP++  +++L+    R        E
Sbjct: 431 APNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFE 490

Query: 436 LLHKMKEINVMPDASIVSIVVD 457
           L  +M  IN        +I++D
Sbjct: 491 LYKEMSRINCQQLVGSSNILLD 512



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 205/426 (48%), Gaps = 34/426 (7%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ ++I GLC   ++ EA  L  +++     P   TYTTL++ LC+ +    A  +
Sbjct: 147 PDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEV 206

Query: 81  FEEMANG-------------------------NGEFGVVCEPNTV----TYTTIIDGLCK 111
           FE+MA G                         +  +  +C  N      TY+ ++ GL K
Sbjct: 207 FEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSK 266

Query: 112 -EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
            +G   +A +L+ +M  K I P+   Y+ +I G C A+   EAK +F EM  +G+ P VV
Sbjct: 267 MDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVV 326

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T+N +++ L    K+ +A  L   M+  G  PD  +YN ++ GFC  G  N A  LF  M
Sbjct: 327 TYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDM 386

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS----KGIKPDVVIHNTLFVGLFE 286
              G     ++Y+ +I G+ K++    A  L+  M S    K   P++  +  L   L +
Sbjct: 387 IKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCK 446

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
             QVE AFKL   M+  G       +   +  L + G + +A EL+  +  + C+  + +
Sbjct: 447 TDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGS 506

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
            N L+DG+ + G ++ A +  + +    +VP+  TY  ++ GLC  G+ D+AR L  ++ 
Sbjct: 507 SNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELV 566

Query: 407 ENAVVP 412
            +   P
Sbjct: 567 RDGKRP 572



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 218/482 (45%), Gaps = 55/482 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G VS    V   +      PD V F  L+ GL    +I EA  LF  +   GC+PDV TY
Sbjct: 93  GNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTY 152

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ GLC+      A+ L E M   +        P  VTYTT+ID LCK   + +A E+
Sbjct: 153 NTMIAGLCKWKKLDEAVFLLERMKQED------VSPTFVTYTTLIDHLCKFTRLQQAYEV 206

Query: 122 LLQMKD-----------------------------------KNIKPNVVTYTSVIRGFCY 146
             +M +                                   KN+     TY+ V+ G   
Sbjct: 207 FEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSK 266

Query: 147 AKDWN-EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
               N EA +L  EMM + + P+   ++++++ LCK  +  EA  +   M   G+ P   
Sbjct: 267 MDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVV 326

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYNTLL+G   T ++  A EL   M   G      SY+++I G+C N +   A  L+ +M
Sbjct: 327 TYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDM 386

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG----VAADTWTYRTFIDGLCK 321
           +  GI  +   +N + VG  +      A+ LF  MQ        A + +TY   I  LCK
Sbjct: 387 IKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCK 446

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP---CGVLVPN 378
              + EA +L   +R       ++ +  L+  L ++GRL+ A EL++ +    C  LV  
Sbjct: 447 TDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG- 505

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVIE 435
             + +I++ G+   G +D+A+D    M +  +VP+  T+D L+ G     + ++  K++E
Sbjct: 506 --SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVE 563

Query: 436 LL 437
            L
Sbjct: 564 EL 565



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 187/363 (51%), Gaps = 6/363 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN + Y  +I  LCK G + +A+  L +M  ++  PNVV+Y  +I G+C A++  +A   
Sbjct: 8   PNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAF 66

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
             EM + G  P    ++ I+   CK G + +A  +   M   G  PD   +N LL G   
Sbjct: 67  LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWR 126

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
             +++ A+ELF SM S GCK  V +Y+ +I G CK K+++ A+ L   M  + + P  V 
Sbjct: 127 ARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVT 186

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL- 335
           + TL   L +  ++++A+++F++M     A     Y    + L + G +VEA  ++  + 
Sbjct: 187 YTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMC 246

Query: 336 RILKCEFDIRAYNSLIDGLCK--SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
           R   C  D   Y+ ++ GL K   G +E A +L   +    + P+   YSI+I GLC   
Sbjct: 247 RKNVCMTD-NTYSLVVLGLSKMDGGNVEAA-KLVTEMMGKKIAPDFYAYSILINGLCKAR 304

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           +  +A+++F +M    + P V+T++ L+ G +   +    +EL + M +   +PD    +
Sbjct: 305 RPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYN 364

Query: 454 IVV 456
           +++
Sbjct: 365 LMI 367



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 163/346 (47%), Gaps = 10/346 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD   ++ LI GLC   R  EA  +F ++R  G  P V TY TL+ GL  T+    A+ 
Sbjct: 287 APDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAME 346

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M +  G       P+T +Y  +I G C  G  ++A  L   M    I  N  TY  
Sbjct: 347 LTYFMLD-QGRL-----PDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNF 400

Query: 140 VIRGFCYAKDWNEAKRLFIEMM----DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +I GF   + W+ A  LF  M     D+   PN+ T+ +++  LCK  +++EA +LL  M
Sbjct: 401 MIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAM 460

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G  P    +  LL      GR++ A EL+  M  + C+  V S +IL++G  +   +
Sbjct: 461 RDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSV 520

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A     +M   GI PD   ++ L VGL    + ++A KL +E+ R+G   +    R  
Sbjct: 521 DEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQL 580

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +  LC  G    A E +  L  +  E  +  +N+L+   C + +L+
Sbjct: 581 LGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLARKLD 626



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 43/306 (14%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M++ G+ P+A  YN L+   C  G +  A E ++      C   V SY+I+I+GYCK + 
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEA-ESYLKRMPQHCAPNVVSYNIIIDGYCKARN 59

Query: 255 IEGALS-----------------------------------LYSEMLSKGIKPDVVIHNT 279
           IE AL+                                   +++EM +KG +PD+V  N 
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  GL+   ++  A +LF  M   G   D  TY T I GLCK   + EAV L   ++   
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSL---PCGVLVPNVVTYSIMIGGLCNDGQMD 396
                  Y +LID LCK  RL+ A E+F  +   PC    P    YS++   L   G++ 
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEP---AYSVLFNKLQRAGKLV 236

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS-KVIELLHKMKEINVMPDASIVSIV 455
           +A  ++ DM    V     T+ +++ G  +++  + +  +L+ +M    + PD    SI+
Sbjct: 237 EASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSIL 296

Query: 456 VDLLAK 461
           ++ L K
Sbjct: 297 INGLCK 302



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 6/203 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P+  T+  LI  LC   ++ EA  L + +R  G  P +  +  L++ L R      A  
Sbjct: 431 APNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFE 490

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L++EM+  N      C+    +   ++DG+ + G VD+AK+ L QM D  I P+  TY  
Sbjct: 491 LYKEMSRIN------CQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDK 544

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G C+    ++A++L  E++  G +P       ++  LC  G    A      +   G
Sbjct: 545 LVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVG 604

Query: 200 VRPDAFTYNTLLDGFCLTGRVNH 222
           V      +NTL+   CL  ++++
Sbjct: 605 VEVTLGMHNTLVTSCCLARKLDY 627


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 215/445 (48%), Gaps = 13/445 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC---EPDVFTYTTLVNGLCRTSHTIVAL 78
           D   F S++  L     +   A ++  ++  GC    PDV TY  LVNGLC+      AL
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQ--GCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVT 136
            + + M+  + +      P+ VT  T++DGLCK G V +A   + Q         PN VT
Sbjct: 193 RVLDGMSRQDLDI----RPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVT 248

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL--DL 194
           Y  +I  FC   + + A  L  +M ++GV  N+VT N I+  LC+ G+   A        
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKR 308

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
            +    + +A TY+TL+     T  V  A ELF    S G       Y  +I+G  +   
Sbjct: 309 TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +E A S+ S M   G K D   +N L  G     ++  A++L  EM+  G+  D  TY T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            + G CK G      EL   +    C+  +  + +L+ G CK G+++ AL + RS+    
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + PN V Y+ +I  LC  G +D A +LF +M+E +V  NV TF+ L++G    N P K  
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAF 548

Query: 435 ELLHKMKEINVMPDASIVSIVVDLL 459
           EL+ +M+E    PD   V ++++ L
Sbjct: 549 ELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 218/442 (49%), Gaps = 16/442 (3%)

Query: 7   GFVVLGRILKSCFT--PDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTYT 62
           G   +  +++ C +  PD VT+  L+ GLC   R+ +A  +   +  +     PDV T  
Sbjct: 154 GMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLN 213

Query: 63  TLVNGLCRTSHTIVALNLFEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+V+GLC++     AL   E+ M++ +G     C PNTVTY  +ID  C+ G +  A EL
Sbjct: 214 TVVDGLCKSGRVQEALAFVEQRMSSVHG-----CPPNTVTYNCLIDAFCRVGNISMAYEL 268

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP----NVVTFNVIMD 177
           + +M+++ +  N+VT  +++ G C A     A   F E   + V P    N VT++ ++ 
Sbjct: 269 VEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTYSTLVG 326

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            L     +  A  L    +  G  PDA  Y T++ G    GR+  A  +  SM+  G K 
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL 386

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              +Y+ILI G+C+ K +  A  L  EM   GI+PDV  +NTL  G  +        +L 
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            +M  +G      T+ T + G CK G I EA+ +  ++       +   YN+LID LCK 
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           G +++A+ELF  +    +  NV T++ ++ GL +    +KA +L   M E    P+ +T 
Sbjct: 507 GDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTV 566

Query: 418 DMLIRGFIRINEPSKVIELLHK 439
           D+L+     I E  ++   + +
Sbjct: 567 DVLMEWLPVIGETDRLKRFMQQ 588



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 199/415 (47%), Gaps = 14/415 (3%)

Query: 2   GRVSHGFVVLGRILKSCF--TPDAVTFTSLIKGLCAESRIMEAAALFTKLR---VFGCEP 56
           GRV     VL  + +      PD VT  +++ GLC   R+ EA A F + R   V GC P
Sbjct: 186 GRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPP 244

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           +  TY  L++  CR  +  +A  L E+M N     GV    N VT  TI+ GLC+ G   
Sbjct: 245 NTVTYNCLIDAFCRVGNISMAYELVEKMENE----GV--PQNIVTLNTIVGGLCRAGRTG 298

Query: 117 KAKELLLQMKD--KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
            A E   + +      K N VTY++++    +  +   A  LF E M +G  P+ + +  
Sbjct: 299 AALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFT 358

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  L + G++++A  +   M + G + D   YN L+ GFC   R++ A EL   M+ +G
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            +  V +Y+ L++G CK  +      L  +M+  G +P V+   TL  G  ++ +++ A 
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           ++   M  +G+  +   Y T ID LCK G +  A+ELF  ++      ++  +N+L+ GL
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
                 E A EL   +      P+ VT  +++  L   G+ D+ +      E  A
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTA 593



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 176/340 (51%), Gaps = 8/340 (2%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM--MDQGVQPNVVTFNVIMDELCKNGKMD 186
           +++P+VVTY  ++ G C A    +A R+   M   D  ++P+VVT N ++D LCK+G++ 
Sbjct: 167 SVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQ 226

Query: 187 EASRLLDLMIQ--HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           EA   ++  +   HG  P+  TYN L+D FC  G ++ A EL   ME+ G    + + + 
Sbjct: 227 EALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNT 286

Query: 245 LINGYCKNKEIEGALSLYSE---MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ G C+      AL  + E   +  +G K + V ++TL   L   + V  A +LF E  
Sbjct: 287 IVGGLCRAGRTGAALEFFREKRTVWPEG-KGNAVTYSTLVGALLHTNNVGMAMELFHEKM 345

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G + D   Y T I GL + G + +A  +  +++    + D +AYN LI G C+  RL 
Sbjct: 346 SEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLH 405

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL + +    + P+V TY+ ++ G C  G      +L   M ++   P+VITF  L+
Sbjct: 406 EAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLV 465

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G+ ++ +  + + +L  M E  + P+  I + ++D L K
Sbjct: 466 HGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK 505



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 6/238 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +   + ++ F  D   +  LI G C + R+ EA  L  +++  G  PDV TY
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+         L  +M +        C+P+ +T+ T++ G CK G +D+A  +
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDG------CQPSVITFGTLVHGYCKVGKIDEALRI 480

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +  I PN V Y ++I   C   D + A  LF EM ++ V  NV TFN ++  L  
Sbjct: 481 LRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
               ++A  L+D M +    PD  T + L++   + G  +  K      E    K  V
Sbjct: 541 KNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKRIV 598



 Score = 38.1 bits (87), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 6/140 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +L  + +S   P+ V + +LI  LC    +  A  LF +++      +V T
Sbjct: 471 VGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTT 530

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  L+ GL   +    A  L ++M          C P+ VT   +++ L   G  D+ K 
Sbjct: 531 FNALLKGLRDKNMPEKAFELMDQMREER------CFPDYVTVDVLMEWLPVIGETDRLKR 584

Query: 121 LLLQMKDKNIKPNVVTYTSV 140
            + Q +    K  V   TS 
Sbjct: 585 FMQQGEHTASKRIVSDRTSA 604


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 225/441 (51%), Gaps = 10/441 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD   +  L +    +    +   L  ++   G +P+V+ YT  +  LCR +    A  +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE M     + GV+  PN  TY+ +IDG CK G V +A  L  ++    + PNVV + ++
Sbjct: 257 FELMK----KHGVL--PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GFC A++   A+ LF+ M+  GV PN+  +N ++   CK+G M EA  LL  M    +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD FTY  L++G C+  +V  A  LF  M++     +  +Y+ LI+GYCK   +E AL 
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L SEM + G++P+++  +TL  G   +  ++ A  L+ EM   G+  D  TY   ID   
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + EA+ L+  +       +   +  L+DG  K GRL +A++ ++         N V
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            ++ +I GLC +G + +A   F DM    + P++ ++  +++G ++    +  + L   M
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDM 610

Query: 441 KEINVMPDASIVSIVVDLLAK 461
            +  ++P+     +V  LLA+
Sbjct: 611 IKTGILPNL----LVNQLLAR 627



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 192/390 (49%), Gaps = 6/390 (1%)

Query: 50  RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL 109
           R   C PD     +++NGL R          ++ M +     G+V  P+   Y  +    
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISR----GLV--PDVHIYFVLFQCC 209

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
            K+G   K ++LL +M    IKPNV  YT  I   C      EA+++F  M   GV PN+
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
            T++ ++D  CK G + +A  L   ++   + P+   + TL+DGFC    +  A+ LFV 
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G    ++ Y+ LI+G+CK+  +  A+ L SEM S  + PDV  +  L  GL    Q
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           V  A +LF +M+   +   + TY + I G CK   + +A++L   +     E +I  +++
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LIDG C    ++ A+ L+  +    +VP+VVTY+ +I     +  M +A  L+ DM E  
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           + PN  TF  L+ GF +    S  I+   +
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 178/384 (46%), Gaps = 41/384 (10%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   + +   IL +   P+ V F +L+ G C    ++ A +LF  +  FG +P+++ Y
Sbjct: 283 GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVY 342

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C++ + + A+ L  EM + N        P+  TYT +I+GLC E  V +A  L
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLN------LSPDVFTYTILINGLCIEDQVAEANRL 396

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK++ I P+  TY S+I G+C   +  +A  L  EM   GV+PN++TF+ ++D  C 
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              +  A  L   M   G+ PD  TY  L+D         H KE                
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA--------HFKE---------------- 492

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
                        ++ AL LYS+ML  GI P+      L  G ++  ++  A   + E  
Sbjct: 493 -----------ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +     +   +   I+GLC+NGYI+ A   F  +R      DI +Y S++ G  +  R+ 
Sbjct: 542 QQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRIT 601

Query: 362 IALELFRSLPCGVLVPNVVTYSIM 385
             + L   +    ++PN++   ++
Sbjct: 602 DTMMLQCDMIKTGILPNLLVNQLL 625



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 41/275 (14%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +PD  T+T LI GLC E ++ EA  LF K++     P   TY +L++G C+  +   AL
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L  EM       GV  EPN +T++T+IDG C    +  A  L  +M  K I P+VVTYT
Sbjct: 430 DLCSEMTAS----GV--EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE-------------------- 178
           ++I       +  EA RL+ +M++ G+ PN  TF  ++D                     
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543

Query: 179 ---------------LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
                          LC+NG +  ASR    M   G+ PD  +Y ++L G     R+   
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
             L   M   G    +    +L   Y  N  ++ A
Sbjct: 604 MMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 227/494 (45%), Gaps = 41/494 (8%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYT 62
           +   + +L  +  + F PD  T+  LI GLC   R+ EA  L   LR    C P+V +Y 
Sbjct: 308 IDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYN 367

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++G  + +    A  LF EM            P+ VTY+T+I GLC  G   +A   L
Sbjct: 368 TLIDGFSKAARVNDAYQLFLEMVTAGQH------PDVVTYSTLIRGLCNAGRASEAHSYL 421

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  K I P V  Y+SVI G C A + + A  +F  M+  G QPN+  +N ++  LCK 
Sbjct: 422 EEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKT 481

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV-SME---------- 231
           G++ +A   +  M + G  PD  TY TL+ G C   R + A +L+V S+E          
Sbjct: 482 GRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSC 541

Query: 232 ---------------------SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
                                + G   T F Y+ +I   CK   +  A  L  +M+  GI
Sbjct: 542 NVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGI 601

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA-V 329
           KPD    + L   +    +   A    +EM R G      TY T ++ L K G   EA V
Sbjct: 602 KPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHV 661

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
            L   +    C  D   Y  LI       ++E A  + + L     + ++V Y+ ++ GL
Sbjct: 662 VLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGL 721

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
                +    +L  +M+ N  V N  TF++LI+GF R+ +  + + +L +MK++ + P A
Sbjct: 722 FRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV-LTPSA 780

Query: 450 SIVSIVVDLLAKNE 463
           +I+  +VD LA+ E
Sbjct: 781 AIIKFLVDELARAE 794



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/417 (33%), Positives = 210/417 (50%), Gaps = 15/417 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD++T+  LI+GLC   ++  A +L+ ++   G  P V T   L+N LC++ +  +AL  
Sbjct: 123 PDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRY 182

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE+M++          P   T+T +IDGL +   VD+A     +MK   I PN  TYT V
Sbjct: 183 FEKMSS---------IPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVV 232

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G   A    EA+R+  EM      P +  +  ++   CK G M +A  LL+ M + G 
Sbjct: 233 INGLVKAGKVAEAERVLQEM----PVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGY 288

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           + D  TYNTL+ G C    ++ A EL   M+S      +F+Y ILI G C+ K +  A  
Sbjct: 289 QGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARD 348

Query: 261 LYSEMLSKG-IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           L   + ++    P+VV +NTL  G  +  +V  A++LF EM   G   D  TY T I GL
Sbjct: 349 LLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGL 408

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C  G   EA      +   K    +  Y+S+I GLC++G L+ A  +F S+      PN+
Sbjct: 409 CNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNL 468

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
             Y+ +I GLC  G++  A+    +M E    P+ +T+  LI G  R +   +  +L
Sbjct: 469 AVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDL 525



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 200/405 (49%), Gaps = 15/405 (3%)

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           V TY      L RT     A  LF+E      ++     P+++TY  +I GLC  G +  
Sbjct: 90  VHTYNCFYEALIRTGQCEEAYRLFKE------KWPQELIPDSITYGILIRGLCNFGKLKL 143

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A  L  +M D+ ++P V+T   ++   C + +   A R F +M      P   T+ +++D
Sbjct: 144 ACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSI---PCAATWTILID 200

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            L +  ++DEA    + M +H   P+ +TY  +++G    G+V  A+ +   M       
Sbjct: 201 GLFRAIRVDEACYYFEEM-KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPV----P 255

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           T+ +Y+ +I G+CK  ++  A  L  +M  KG + D + +NTL  G   + +++RA++L 
Sbjct: 256 TLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELL 315

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL-KCEFDIRAYNSLIDGLCK 356
           +EM+ N    D +TY   I GLC+   + EA +L  TLR    C  ++ +YN+LIDG  K
Sbjct: 316 EEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSK 375

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           + R+  A +LF  +      P+VVTYS +I GLCN G+  +A     +M    ++P V  
Sbjct: 376 AARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPV 435

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  +I G  R  E      +   M      P+ ++ + ++  L K
Sbjct: 436 YSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCK 480



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 191/426 (44%), Gaps = 15/426 (3%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+    + L    +  EA  LF +       PD  TY  L+ GLC      +A +L+EEM
Sbjct: 92  TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
            +          P  +T   +++ LCK G ++ A     +M      P   T+T +I G 
Sbjct: 152 VDRG------LRPVVLTCKFLLNALCKSGNLELALRYFEKMSSI---PCAATWTILIDGL 202

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
             A   +EA   F EM    + PN  T+ V+++ L K GK+ EA R+L  M      P  
Sbjct: 203 FRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PTL 257

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             Y +++ G C  G +  A  L   M+  G +    +Y+ LI+G+C+ +EI+ A  L  E
Sbjct: 258 ANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEE 317

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ-RNGVAADTWTYRTFIDGLCKNG 323
           M S    PD+  ++ L  GL    ++  A  L   ++  +    +  +Y T IDG  K  
Sbjct: 318 MKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAA 377

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + +A +LF  +       D+  Y++LI GLC +GR   A      +    ++P V  YS
Sbjct: 378 RVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYS 437

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            +I GLC  G++D A  +F  M  N   PN+  ++ LI G  +          + +M E 
Sbjct: 438 SVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTER 497

Query: 444 NVMPDA 449
              PD 
Sbjct: 498 GCSPDG 503



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 174/404 (43%), Gaps = 76/404 (18%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            RV+  + +   ++ +   PD VT+++LI+GLC   R  EA +   ++      P V  Y
Sbjct: 377 ARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVY 436

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +++++GLCR      A  +F+ M ANG       C+PN   Y ++I GLCK G +  AK 
Sbjct: 437 SSVISGLCRAGELDAASTVFDSMVANG-------CQPNLAVYNSLIYGLCKTGRLCDAKL 489

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ-------------- 166
            + +M ++   P+ VTY ++I G C     +EA  L++  ++QG++              
Sbjct: 490 RVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLR 549

Query: 167 ------------------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
                             P    +  +++ LCK   + EA +LL+ MI  G++PD  T +
Sbjct: 550 CLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVD 609

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING-------------------- 248
            L+   C   +   A      M  +G K +V +YS L+N                     
Sbjct: 610 ALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISH 669

Query: 249 ----------------YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
                           Y    ++E A ++  E+ SK     +V +NTL  GLF    ++ 
Sbjct: 670 TSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQM 729

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
            ++L  EM+RN    +  T+   I G C+ G    AV +   ++
Sbjct: 730 VYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMK 773


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 202/388 (52%), Gaps = 7/388 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV H   VL R+ K  F PD VT+  LI   C   R+  A  +  +L    C+P V TYT
Sbjct: 161 RVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYT 220

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+           A+ L +EM +          P+  TY  +++G+CKEG +D+A E L
Sbjct: 221 ILIEATITQGGIDEAMKLLDEMLSRG------LRPDRYTYNVVVNGMCKEGMLDRAFEFL 274

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            ++        V TY  ++R       W   ++L  +M+ +G +PN +T++ ++  LC++
Sbjct: 275 SRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRD 334

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           GK+DEA  +L +M +  + PD ++Y+ L+   C  G+V+ A E    M S G    + SY
Sbjct: 335 GKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSY 394

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + ++   CKN   + AL+++ ++   G  P+   +NTLF  L+      RA  +  EM  
Sbjct: 395 NSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLS 454

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           NG+  D  TY + I  LC++G + +A+EL        KC+  + +YN+++ GLCK  R+ 
Sbjct: 455 NGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRII 514

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGL 389
            A+E+  ++     +PN  TY+++I G+
Sbjct: 515 DAIEVLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 221/456 (48%), Gaps = 8/456 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            +       L  ++   + PD +  T LIKG     +I +A  +   L   G +PDVF Y
Sbjct: 91  AKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAY 149

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C+      A  + + M           EP+ VTY  +I   C  G +D A  +
Sbjct: 150 NAVISGFCKADRVDHASKVLDRMKKRG------FEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + Q+   N KP V+TYT +I         +EA +L  EM+ +G++P+  T+NV+++ +CK
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A   L  + ++G      TYN LL      G+  + ++L   M   GC+    +
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI   C++ +I+ A ++   M  K + PD   ++ L   L    +V+ A +  D+M 
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D  +Y + +  LCKNG   EA+ +F  L  + C  +  +YN+L   L  SG   
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKI 443

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM-EENAVVPNVITFDML 420
            AL +   +    + P+ +TY+ +I  LC DG +D+A +L +DM E     P VI+++ +
Sbjct: 444 RALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTV 503

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           + G  ++      IE+L  M     +P+ +  ++++
Sbjct: 504 LLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLI 539



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 199/398 (50%), Gaps = 7/398 (1%)

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           +N  C+++    +L   + M N         +P+ +  T +I G      ++KA +++ +
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRG------YKPDVILCTKLIKGFFNMKKIEKAIQVM-E 136

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           + +K+ KP+V  Y +VI GFC A   + A ++   M  +G +P+VVT+N+++   C  G+
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D A R++D +++   +P   TY  L++     G ++ A +L   M S G +   ++Y++
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           ++NG CK   ++ A    S +   G    V  +N L   L    + E   KL  +M   G
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              +  TY T I  LC++G I EA  +   ++      D  +Y+ LI  LC+ G++++A+
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E    +  G  +P++++Y+ ++  LC +G  D+A ++F  + E    PN  +++ L    
Sbjct: 377 EFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGAL 436

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               +  + + ++ +M    + PD    + ++  L ++
Sbjct: 437 WSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRD 474



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 154/354 (43%), Gaps = 37/354 (10%)

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV--------------------- 200
           DQ        F   ++  CK+ K DE+   L  M+  G                      
Sbjct: 70  DQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIE 129

Query: 201 -------------RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
                        +PD F YN ++ GFC   RV+HA ++   M+  G +  V +Y+ILI 
Sbjct: 130 KAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIG 189

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
            +C    ++ AL +  ++L    KP V+ +  L         ++ A KL DEM   G+  
Sbjct: 190 NFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRP 249

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D +TY   ++G+CK G +  A E    +    C   +  YN L+  L   G+ E   +L 
Sbjct: 250 DRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLM 309

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +      PN +TYS +I  LC DG++D+A+++   M+E A+ P+  ++D LI    R 
Sbjct: 310 SDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCRE 369

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
            +    IE L  M     +PD    + ++  L KN    N+  +  + E+  EV
Sbjct: 370 GKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNG---NADEALNIFEKLGEV 420



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 130/248 (52%), Gaps = 7/248 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+  +G  ++  +L     P+ +T+++LI  LC + +I EA  +   ++     PD ++Y
Sbjct: 300 GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSY 359

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ LCR     +A+   ++M +G G       P+ ++Y +I+  LCK G  D+A  +
Sbjct: 360 DPLISALCREGKVDLAIEFLDDMISG-GHL-----PDILSYNSILASLCKNGNADEALNI 413

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++ +    PN  +Y ++      + D   A  + +EM+  G+ P+ +T+N ++  LC+
Sbjct: 414 FEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCR 473

Query: 182 NGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +G +D+A  LL D+      +P   +YNT+L G C   R+  A E+  +M + GC     
Sbjct: 474 DGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNET 533

Query: 241 SYSILING 248
           +Y++LI G
Sbjct: 534 TYTLLIQG 541



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 10/207 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V      L  ++     PD +++ S++  LC      EA  +F KL   GC P+  +Y
Sbjct: 370 GKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSY 429

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            TL   L  +   I AL +  EM +NG        +P+ +TY ++I  LC++G VD+A E
Sbjct: 430 NTLFGALWSSGDKIRALGMILEMLSNG-------IDPDEITYNSLISCLCRDGLVDQAIE 482

Query: 121 LLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           LL+ M + +  +P V++Y +V+ G C  +   +A  +   M+++G  PN  T+ +++  +
Sbjct: 483 LLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542

Query: 180 CKNGKMDEASRLLDLMIQ-HGVRPDAF 205
              G   +A  L +L++    +  D+F
Sbjct: 543 GFAGWRYDAMELANLLVNMDAISEDSF 569


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 215/445 (48%), Gaps = 13/445 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC---EPDVFTYTTLVNGLCRTSHTIVAL 78
           D   F S++  L     +   A ++  ++  GC    PDV TY  LVNGLC+      AL
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQ--GCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVT 136
            + + M+  + +      P+ VT  T++DGLCK G V +A   + Q         PN VT
Sbjct: 193 RVLDGMSRQDLDI----RPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVT 248

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL--DL 194
           Y  +I  FC   + + A  L  +M ++GV  N+VT N I+  LC+ G+   A        
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKR 308

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
            +    + +A TY+TL+     T  V  A ELF    S G       Y  +I+G  +   
Sbjct: 309 TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +E A S+ S M   G K D   +N L  G     ++  A++L  EM+  G+  D  TY T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            + G CK G      EL   +    C+  +  + +L+ G CK G+++ AL + RS+    
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + PN V Y+ +I  LC  G +D A +LF +M+E +V  NV TF+ L++G    N P K  
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAF 548

Query: 435 ELLHKMKEINVMPDASIVSIVVDLL 459
           EL+ +M+E    PD   V ++++ L
Sbjct: 549 ELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 218/442 (49%), Gaps = 16/442 (3%)

Query: 7   GFVVLGRILKSCFT--PDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTYT 62
           G   +  +++ C +  PD VT+  L+ GLC   R+ +A  +   +  +     PDV T  
Sbjct: 154 GMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLN 213

Query: 63  TLVNGLCRTSHTIVALNLFEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+V+GLC++     AL   E+ M++ +G     C PNTVTY  +ID  C+ G +  A EL
Sbjct: 214 TVVDGLCKSGRVQEALAFVEQRMSSVHG-----CPPNTVTYNCLIDAFCRVGNISMAYEL 268

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP----NVVTFNVIMD 177
           + +M+++ +  N+VT  +++ G C A     A   F E   + V P    N VT++ ++ 
Sbjct: 269 VEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTYSTLVG 326

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            L     +  A  L    +  G  PDA  Y T++ G    GR+  A  +  SM+  G K 
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL 386

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              +Y+ILI G+C+ K +  A  L  EM   GI+PDV  +NTL  G  +        +L 
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            +M  +G      T+ T + G CK G I EA+ +  ++       +   YN+LID LCK 
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           G +++A+ELF  +    +  NV T++ ++ GL +    +KA +L   M E    P+ +T 
Sbjct: 507 GDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTV 566

Query: 418 DMLIRGFIRINEPSKVIELLHK 439
           D+L+     I E  ++   + +
Sbjct: 567 DVLMEWLPVIGETDRLKRFMQQ 588



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 199/415 (47%), Gaps = 14/415 (3%)

Query: 2   GRVSHGFVVLGRILKSCF--TPDAVTFTSLIKGLCAESRIMEAAALFTKLR---VFGCEP 56
           GRV     VL  + +      PD VT  +++ GLC   R+ EA A F + R   V GC P
Sbjct: 186 GRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPP 244

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           +  TY  L++  CR  +  +A  L E+M N     GV    N VT  TI+ GLC+ G   
Sbjct: 245 NTVTYNCLIDAFCRVGNISMAYELVEKMENE----GV--PQNIVTLNTIVGGLCRAGRTG 298

Query: 117 KAKELLLQMKD--KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
            A E   + +      K N VTY++++    +  +   A  LF E M +G  P+ + +  
Sbjct: 299 AALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFT 358

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  L + G++++A  +   M + G + D   YN L+ GFC   R++ A EL   M+ +G
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            +  V +Y+ L++G CK  +      L  +M+  G +P V+   TL  G  ++ +++ A 
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           ++   M  +G+  +   Y T ID LCK G +  A+ELF  ++      ++  +N+L+ GL
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
                 E A EL   +      P+ VT  +++  L   G+ D+ +      E  A
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTA 593



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 176/340 (51%), Gaps = 8/340 (2%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM--MDQGVQPNVVTFNVIMDELCKNGKMD 186
           +++P+VVTY  ++ G C A    +A R+   M   D  ++P+VVT N ++D LCK+G++ 
Sbjct: 167 SVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQ 226

Query: 187 EASRLLDLMIQ--HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           EA   ++  +   HG  P+  TYN L+D FC  G ++ A EL   ME+ G    + + + 
Sbjct: 227 EALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNT 286

Query: 245 LINGYCKNKEIEGALSLYSE---MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ G C+      AL  + E   +  +G K + V ++TL   L   + V  A +LF E  
Sbjct: 287 IVGGLCRAGRTGAALEFFREKRTVWPEG-KGNAVTYSTLVGALLHTNNVGMAMELFHEKM 345

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G + D   Y T I GL + G + +A  +  +++    + D +AYN LI G C+  RL 
Sbjct: 346 SEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLH 405

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A EL + +    + P+V TY+ ++ G C  G      +L   M ++   P+VITF  L+
Sbjct: 406 EAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLV 465

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            G+ ++ +  + + +L  M E  + P+  I + ++D L K
Sbjct: 466 HGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK 505



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 6/238 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +   + ++ F  D   +  LI G C + R+ EA  L  +++  G  PDV TY
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C+         L  +M +        C+P+ +T+ T++ G CK G +D+A  +
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDG------CQPSVITFGTLVHGYCKVGKIDEALRI 480

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +  I PN V Y ++I   C   D + A  LF EM ++ V  NV TFN ++  L  
Sbjct: 481 LRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
               ++A  L+D M +    PD  T + L++   + G  +  K      E    K  V
Sbjct: 541 KNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKRIV 598



 Score = 38.1 bits (87), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 8/162 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +L  + +S   P+ V + +LI  LC    +  A  LF +++      +V T
Sbjct: 471 VGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTT 530

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  L+ GL   +    A  L ++M          C P+ VT   +++ L   G  D+ K 
Sbjct: 531 FNALLKGLRDKNMPEKAFELMDQMREER------CFPDYVTVDVLMEWLPVIGETDRLKR 584

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD 162
            + Q +    K  V   TS    F +A    E   L    +D
Sbjct: 585 FMQQGEHTASKRIVSDRTSAY--FHFATGLAETFTLHKRTLD 624


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 228/437 (52%), Gaps = 11/437 (2%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           LIK     + +++AA +F + R FG E ++ +   L+N     + T    +LFEE+ +  
Sbjct: 184 LIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSG 243

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGF-----VDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
                   PN  TYT +++  CK  F     + KA E+L +M+     P VVTY + I G
Sbjct: 244 PS------PNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHG 297

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C A     A RL  ++  +    N   +N ++ E C+NG++ EA  LL+ M  HG+ P 
Sbjct: 298 LCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPT 357

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
           A++Y+ L+DG C  G+V  A +L   M     K ++ +YS L +G CK+   E +LS++ 
Sbjct: 358 AYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFH 417

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            + ++G K DV+ +NTL  G      +  A KL  EM+ NG   +++T+   I G CK  
Sbjct: 418 NLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQ 477

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + +A+E+F  +  +  + +I   N + D   + G    AL+L   +    +VPN  TY+
Sbjct: 478 RLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYN 537

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           I+I  LC + + +KA ++   M +N V P  I ++ LI G+ + + P+K + L  KM ++
Sbjct: 538 IVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKV 597

Query: 444 NVMPDASIVSIVVDLLA 460
            + P     ++++++ +
Sbjct: 598 GIPPSIVTYTMLINMFS 614



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 212/429 (49%), Gaps = 6/429 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           ++  + ++I   C    + EA  L   +R  G  P  ++Y+ L++GLC+      AL+L 
Sbjct: 322 NSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLI 381

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM   N       +P+ VTY+++ DGLCK G  + +  +   +  +  K +V++Y ++I
Sbjct: 382 EEMVQSN------VKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLI 435

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            GF   +D   A +L  EM   G  PN  TFN ++   CK  ++D+A  +  +M++ GV+
Sbjct: 436 NGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQ 495

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            + FT N + D F   G    A +L   ++ +G     ++Y+I+I   CK ++ E A  +
Sbjct: 496 LNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEV 555

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              ML   + P  + +NTL  G  +     +A  L+ +M + G+     TY   I+    
Sbjct: 556 LPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSN 615

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
              + EA  LF  +       D   +  +I G CK G ++ A  L+  +      PNVVT
Sbjct: 616 RSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVT 675

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ +I G     +MDKA  LF  M+ + V P+ +T+  LI G+  +    +V E+ ++MK
Sbjct: 676 YTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMK 735

Query: 442 EINVMPDAS 450
           E  V P+ +
Sbjct: 736 ENGVFPNYT 744



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 216/430 (50%), Gaps = 6/430 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P  VT+ + I GLC    +  A  L   LR+     + + Y  +++  CR      A  
Sbjct: 285 SPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFE 344

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L E+M +          P   +Y+ +IDGLCK+G V+KA +L+ +M   N+KP++VTY+S
Sbjct: 345 LLEDMRSHG------ISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSS 398

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +  G C +     +  +F  +  +G + +V+++N +++       M  A +L+  M  +G
Sbjct: 399 LFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNG 458

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P++FT+N L+ GFC   R++ A E+F  M  +G +  +F+ +I+ + + +      AL
Sbjct: 459 SVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEAL 518

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L +E+   GI P+   +N +   L +  + E+A+++   M +N V      Y T IDG 
Sbjct: 519 KLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGY 578

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K     +A+ L+  +  +     I  Y  LI+      +++ A  LF+ +    LVP+ 
Sbjct: 579 AKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDE 638

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           + ++ +I G C  G M  A  L+ +M +    PNV+T+  LI G+ +I    K   L +K
Sbjct: 639 IIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNK 698

Query: 440 MKEINVMPDA 449
           MK  NV PD 
Sbjct: 699 MKRDNVTPDG 708



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 221/454 (48%), Gaps = 46/454 (10%)

Query: 44  ALFTKLRVFGCEPDVFTYTTLVNGLCRTSH-----TIVALNLFEEMANGNGEFGVVCEPN 98
           +LF +L+  G  P+VFTYT ++N  C+ S       + A  + EEM   NGE      P 
Sbjct: 234 SLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEM-EMNGE-----SPT 287

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
            VTY   I GLC+ G V+ A  L+  ++ +N   N   Y +VI  FC   + +EA  L  
Sbjct: 288 VVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLE 347

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           +M   G+ P   ++++++D LCK G++++A  L++ M+Q  V+P   TY++L DG C +G
Sbjct: 348 DMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSG 407

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
               +  +F ++ + G KH V SY+ LING+   +++  A  L  EM   G  P+    N
Sbjct: 408 LTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFN 467

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L  G  +  ++++A ++F  M + GV  + +T     D   + G+  EA++L + ++ L
Sbjct: 468 RLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDL 527

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSL------PCGV------------------ 374
               +   YN +I  LCK  + E A E+   +      PC +                  
Sbjct: 528 GIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKA 587

Query: 375 -----------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
                      + P++VTY+++I    N  +M +A  LF +M +  +VP+ I F  +I G
Sbjct: 588 LLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAG 647

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           F ++ +      L  +M +    P+    + ++D
Sbjct: 648 FCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLID 681



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 219/433 (50%), Gaps = 9/433 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +L  +     +P A +++ LI GLC + ++ +A  L  ++     +P + TY
Sbjct: 337 GELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTY 396

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L +GLC++  T ++L++F  +    G  G   + + ++Y T+I+G   +  +  A +L
Sbjct: 397 SSLFDGLCKSGLTEISLSMFHNL----GAEGY--KHDVISYNTLINGFVLQRDMGSACKL 450

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+     PN  T+  +I GFC  +  ++A  +F  M+  GVQ N+ T N++ DE  +
Sbjct: 451 VHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNR 510

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G   EA +L++ +   G+ P+++TYN ++   C   +   A E+   M           
Sbjct: 511 EGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIH 570

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GY K      AL LY++ML  GI P +V +  L        +++ A+ LF EM 
Sbjct: 571 YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMI 630

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G+  D   +   I G CK G +  A  L+  +       ++  Y  LIDG  K  R++
Sbjct: 631 KKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMD 690

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM-- 419
            A  LF  +    + P+ +TY+ +I G  + G  D+ R++F +M+EN V PN   +    
Sbjct: 691 KADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATLG 750

Query: 420 LIRGFIRINEPSK 432
           L  G +R  EP+K
Sbjct: 751 LHLGVVR-EEPAK 762



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 178/351 (50%), Gaps = 5/351 (1%)

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           A ++ +Q +   ++ N+++   ++  F  A      + LF E+ D G  PNV T+ ++M+
Sbjct: 197 AADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMN 256

Query: 178 ELCK-----NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
             CK     N  + +A+ +L+ M  +G  P   TY   + G C  G V  A  L   +  
Sbjct: 257 YYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRI 316

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
                  + Y+ +I+ +C+N E+  A  L  +M S GI P    ++ L  GL +  QVE+
Sbjct: 317 RNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEK 376

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  L +EM ++ V     TY +  DGLCK+G    ++ +FH L     + D+ +YN+LI+
Sbjct: 377 ALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLIN 436

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G      +  A +L   +     VPN  T++ +I G C   ++DKA ++F  M +  V  
Sbjct: 437 GFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQL 496

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           N+ T +++   F R     + ++L+++++++ ++P++   +IV+  L K +
Sbjct: 497 NIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQ 547



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 154/318 (48%), Gaps = 5/318 (1%)

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           D  +  +++  NV++    +N  + +A+ +     + G+  +  + N LL+ F    +  
Sbjct: 171 DAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTE 230

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCK-----NKEIEGALSLYSEMLSKGIKPDVVI 276
             + LF  ++  G    VF+Y+I++N YCK     N +I  A  +  EM   G  P VV 
Sbjct: 231 FIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVT 290

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +     GL     VE A +L  +++      +++ Y   I   C+NG + EA EL   +R
Sbjct: 291 YGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMR 350

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                    +Y+ LIDGLCK G++E AL+L   +    + P++VTYS +  GLC  G  +
Sbjct: 351 SHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTE 410

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +  +F ++       +VI+++ LI GF+   +     +L+H+M+    +P++   + ++
Sbjct: 411 ISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLI 470

Query: 457 DLLAKNEISLNSLPSFTV 474
               K +    +L  FT+
Sbjct: 471 HGFCKRQRLDKALEVFTI 488


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 228/441 (51%), Gaps = 21/441 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P + T  S+I+ LC   R+  A +L   +   G  PD+ T++ L+N LC+      A   
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEA--- 428

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTYTS 139
            +E   G          +  +Y ++++ LCK   V +A  +   M  +++  P+VV+Y+ 
Sbjct: 429 -QEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI 487

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I GFC   +   A++L+ +M+D    PNV T+N  ++ L + G++ +A  + + M+  G
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG 547

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD  TY+TL+ GF L  + + A ELF +M S GC+    +Y+ L++G CK  + + A 
Sbjct: 548 CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAH 607

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+ +M+ +G  PD V + TL  G   + ++E+A ++FDEM   G   D   Y   + G 
Sbjct: 608 ELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGF 667

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVL 375
            + G   EA +LF  +   +C+ D  ++N +IDGL K+ RL+ A+E+F  +     C   
Sbjct: 668 FRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS-- 725

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF---------IR 426
            P++VTY+ +I GLC + ++ +A  +F +++   + P+   F++L+            IR
Sbjct: 726 -PDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCGIVYQFEIR 784

Query: 427 INEPSKVIELLHKMKEINVMP 447
             +P     L+  M      P
Sbjct: 785 FKDPPAFNVLMEAMHAAGHKP 805



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 200/388 (51%), Gaps = 8/388 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVF 59
           GRV     +L  ++K  + PD  T + LI  LC   +I EA      +  ++       F
Sbjct: 388 GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCF 447

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           +Y +L+N LC+      A  +F  M +   E   V  P+ V+Y+ +IDG CK   + +A+
Sbjct: 448 SYNSLLNSLCKAKKVHQAFAIFSTMVS---ERSFV--PDVVSYSILIDGFCKIDELGRAE 502

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L  QM D N  PNV TY + + G        +A+ ++ EM+  G  P+V+T++ ++   
Sbjct: 503 KLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGF 562

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
               K D+A  L + MI  G RP+A TYN LL G C   + + A ELF  M   GC    
Sbjct: 563 SLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDR 622

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ L+ G+C   +IE A+ ++ EM+SKG  PDVV +N L  G F   +   A +LF  
Sbjct: 623 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQV 682

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSG 358
           M       DT ++   IDGL K   + +AVE+F  + +   C  D+  YNSLI GLC   
Sbjct: 683 MVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 742

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMI 386
           RL  A+++F+ +    L P+   +++++
Sbjct: 743 RLSEAMKVFKEIDRLKLSPDPHAFNVLL 770



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 240/505 (47%), Gaps = 42/505 (8%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V GR L+     + +   +L+     + + +EA+ LF  +   GC+PD   Y+ +V   C
Sbjct: 221 VFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHC 280

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEG---------------- 113
           +  +   A  LF EMA  +         N V +T  + GLCK G                
Sbjct: 281 KLENLDEAFKLFLEMAVESK-----APLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESL 335

Query: 114 ------------------FVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
                              +DKA+E  L++  +NI+P+  T  SVI+  C A   + A  
Sbjct: 336 SSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALS 395

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH--GVRPDAFTYNTLLDG 213
           L   M+ +G  P++ T +++++ELCK  K+ EA   L  M +         F+YN+LL+ 
Sbjct: 396 LLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNS 455

Query: 214 FCLTGRVNHAKELFVSMES-MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
            C   +V+ A  +F +M S       V SYSILI+G+CK  E+  A  LY +M+     P
Sbjct: 456 LCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 515

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +V  +N    GL    ++  A  +++EM   G + D  TY T I G        +A ELF
Sbjct: 516 NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELF 575

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
            T+    C  +   YN L+ GLCK  + + A ELFR +      P+ VTY+ ++ G CN 
Sbjct: 576 ETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNV 635

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G++++A ++F +M      P+V+ ++ L++GF R  +P +  +L   M      PD    
Sbjct: 636 GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSH 695

Query: 453 SIVVDLLAKNEISLNSLPSFTVHEQ 477
           +I++D L+K +   +++  F   EQ
Sbjct: 696 NIMIDGLSKAKRLDDAVEVFERMEQ 720



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 243/482 (50%), Gaps = 16/482 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F    R ++   +     +  LI+ L    RI +A     ++     +P   T 
Sbjct: 319 GKIEQAFEAC-RTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTC 377

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++  LC+      AL+L E M          C P+  T++ +I+ LCK   + +A+E 
Sbjct: 378 HSVIQELCKAGRVDSALSLLETMIKRG-----YC-PDMATHSMLINELCKADKIQEAQEF 431

Query: 122 LLQMKDK--NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDE 178
           L  M  K  +   +  +Y S++   C AK  ++A  +F  M+ ++   P+VV++++++D 
Sbjct: 432 LQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDG 491

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            CK  ++  A +L   MI     P+  TYN  L+G    GR+  A+ ++  M + GC   
Sbjct: 492 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPD 551

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +YS LI+G+   ++ + A  L+  M+S+G +P+ V +N L  GL +  + + A +LF 
Sbjct: 552 VITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 611

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           +M   G   D  TY T + G C  G I +AVE+F  +     + D+ AYN L+ G  ++G
Sbjct: 612 KMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 671

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AVVPNVITF 417
           +   A +LF+ +      P+ V+++IMI GL    ++D A ++F  ME++    P+++T+
Sbjct: 672 KPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTY 731

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD-----LLAKNEISLNSLPSF 472
           + LI G       S+ +++  ++  + + PD    +++++     ++ + EI     P+F
Sbjct: 732 NSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCGIVYQFEIRFKDPPAF 791

Query: 473 TV 474
            V
Sbjct: 792 NV 793



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 219/483 (45%), Gaps = 48/483 (9%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F  D  T+  L+  L     + +A  +F K+   G  P+ FTY  LV   C   ++  A+
Sbjct: 125 FKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAV 184

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGL---CKEGFVDK----------AKELLLQ- 124
             F EM +         +P++  Y  + + L    KEG   +          A E++L+ 
Sbjct: 185 RFFGEMVDKG------FKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKK 238

Query: 125 -------MKDKNI--------------KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
                  ++DK I              KP+   Y+ ++   C  ++ +EA +LF+EM  +
Sbjct: 239 ALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVE 298

Query: 164 GVQP-NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
              P N V +   +  LCK+GK+++A      M Q  +      Y+ L+     +GR++ 
Sbjct: 299 SKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDK 357

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
           A+E  + +     + +  +   +I   CK   ++ ALSL   M+ +G  PD+  H+ L  
Sbjct: 358 AEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLIN 417

Query: 283 GLFEIHQVERAFKLFDEMQRN--GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
            L +  +++ A +    M R     ++  ++Y + ++ LCK   + +A  +F T+ + + 
Sbjct: 418 ELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTM-VSER 476

Query: 341 EF--DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            F  D+ +Y+ LIDG CK   L  A +L++ +     VPNV TY+  + GL   G++  A
Sbjct: 477 SFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADA 536

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           + ++ +M      P+VIT+  LI GF    +  +  EL   M      P+A   + ++  
Sbjct: 537 QGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHG 596

Query: 459 LAK 461
           L K
Sbjct: 597 LCK 599



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 198/455 (43%), Gaps = 46/455 (10%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           EA   F  L+    + DVFTY  L++ L R      A  +FE+M       GVV  PN  
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQ----GVV--PNGF 165

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  ++   C E   D+A     +M DK  KP+   Y  V           E  R+F   
Sbjct: 166 TYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRD 225

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +++ V   ++    ++       K  EAS+L   M++ G +PDA  Y+ ++   C    +
Sbjct: 226 LEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285

Query: 221 NHAKELFVSM--ESMGCKHTVFSYSILINGYCKNKEIEGAL--------SLYS------- 263
           + A +LF+ M  ES    + V +++  ++G CK+ +IE A         SL S       
Sbjct: 286 DEAFKLFLEMAVESKAPLNNV-AWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDM 344

Query: 264 -------------------EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
                              E+  + I+P     +++   L +  +V+ A  L + M + G
Sbjct: 345 LIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 404

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTL--RILKCEFDIRAYNSLIDGLCKSGRLEI 362
              D  T+   I+ LCK   I EA E    +  +I        +YNSL++ LCK+ ++  
Sbjct: 405 YCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQ 464

Query: 363 ALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           A  +F ++      VP+VV+YSI+I G C   ++ +A  L+  M +   VPNV T++  +
Sbjct: 465 AFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 524

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            G +R    +    +  +M      PD    S ++
Sbjct: 525 NGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLI 559



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 191/408 (46%), Gaps = 41/408 (10%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           +  TY  ++D L +   + +A ++  +M  + + PN  TY  +++  CY ++ +EA R F
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFF 187

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EM+D+G +P+   +  + + L   GK  E SR+    ++  V  +      LL  F + 
Sbjct: 188 GEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQ 247

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP-DVVI 276
            +   A +LF +M   GCK     YS ++  +CK + ++ A  L+ EM  +   P + V 
Sbjct: 248 DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVA 307

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
                 GL +  ++E+AF+    MQ + +++    Y   I  L ++G I +A E    + 
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIRLLIESGRIDKAEEACLEIA 366

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               +      +S+I  LCK+GR++ AL L  ++      P++ T+S++I  LC   ++ 
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQ 426

Query: 397 KARDLFLDME--------------------------------------ENAVVPNVITFD 418
           +A++    M+                                      E + VP+V+++ 
Sbjct: 427 EAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYS 486

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD-LLAKNEIS 465
           +LI GF +I+E  +  +L  +M ++N +P+ +  +  ++ L+ K  I+
Sbjct: 487 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIA 534



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V   ++     PD V +  L+KG     +  EA  LF  +    C+PD  +
Sbjct: 635 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  +++GL +      A+ +FE M   +G     C P+ VTY ++I GLC E  + +A +
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHG-----CSPDLVTYNSLIFGLCGEQRLSEAMK 749

Query: 121 LLLQMKDKNIKPN 133
           +  ++    + P+
Sbjct: 750 VFKEIDRLKLSPD 762


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 184/323 (56%), Gaps = 6/323 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F V  +ILK  + P+ +TFT+LIKGLC + +I +A     KL   G + +  +
Sbjct: 135 LGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQIS 194

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++GLC+   T  AL+L   +       G + +PN V Y+TIIDG+CK+  V+ A +
Sbjct: 195 YGTLIDGLCKVGETRAALDLLRRVD------GKLVQPNVVMYSTIIDGMCKDKHVNDAFD 248

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I PNVVTY+++I GF       +A  LF +M+ + ++P+V TFN+++D  C
Sbjct: 249 LYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFC 308

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+GK+  A +L+D M   G  P+  TY+++LD  C T RV+ A  L   ++  G +  + 
Sbjct: 309 KSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMH 368

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILI+G C + ++E A +++ ++L KG    VV +  +F G  +    + A  L  +M
Sbjct: 369 TYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKM 428

Query: 301 QRNGVAADTWTYRTFIDGLCKNG 323
           + NG   D  TY      L K G
Sbjct: 429 EENGCIPDAKTYELIKLSLFKKG 451



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 192/368 (52%), Gaps = 1/368 (0%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P  + +  I+  L K         L  +M+ + IKPN+V    +I  FC       A  +
Sbjct: 85  PPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 144

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F +++  G  PN +TF  ++  LC  G++ +A    D ++  G + +  +Y TL+DG C 
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G    A +L   ++    +  V  YS +I+G CK+K +  A  LYSEM+SKGI P+VV 
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           ++ L  G F + +++ A  LF++M    +  D +T+   +D  CK+G I  A++L   + 
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMH 324

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 +I  Y+S++D LCK+ R++ A+ L   L    + PN+ TY+I+I GLC  G+++
Sbjct: 325 DRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLE 384

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV- 455
            AR++F D+        V+T+ ++  GF +     +   LL KM+E   +PDA    ++ 
Sbjct: 385 DARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIK 444

Query: 456 VDLLAKNE 463
           + L  K E
Sbjct: 445 LSLFKKGE 452



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 209/420 (49%), Gaps = 7/420 (1%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           + ++S      + + + +A +LF  L      P    +  ++  L ++ H    L L ++
Sbjct: 53  IPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKK 112

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M     EF  + +PN V    +I+  C+ G +  A  +  ++      PN +T+T++I+G
Sbjct: 113 M-----EFRGI-KPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKG 166

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C     ++A     +++  G Q N +++  ++D LCK G+   A  LL  +    V+P+
Sbjct: 167 LCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPN 226

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
              Y+T++DG C    VN A +L+  M S G    V +YS LI+G+    +++ A+ L++
Sbjct: 227 VVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFN 286

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           +M+S+ IKPDV   N L     +  ++  A KL DEM   G   +  TY + +D LCK  
Sbjct: 287 KMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTH 346

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            + +AV L   L+      ++  Y  LIDGLC SG+LE A  +F  L        VVTY 
Sbjct: 347 RVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYI 406

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           +M  G C  G  D+A  L   MEEN  +P+  T++++     +  E + + E LH+  EI
Sbjct: 407 VMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGE-NDMAEKLHRECEI 465



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 183/348 (52%), Gaps = 6/348 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V    LI   C    I  A ++F K+   G  P+  T+TTL+ GLC       ALN 
Sbjct: 120 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNF 179

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +++     +F      N ++Y T+IDGLCK G    A +LL ++  K ++PNVV Y+++
Sbjct: 180 HDKLVALGFQF------NQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTI 233

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C  K  N+A  L+ EM+ +G+ PNVVT++ ++      GK+ +A  L + MI   +
Sbjct: 234 IDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENI 293

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD +T+N L+D FC +G++++A +L   M   G    + +YS +++  CK   ++ A++
Sbjct: 294 KPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVA 353

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L +++  +GI+P++  +  L  GL    ++E A  +F+++   G      TY     G C
Sbjct: 354 LLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFC 413

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           K G   EA  L   +    C  D + Y  +   L K G  ++A +L R
Sbjct: 414 KKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHR 461



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 161/327 (49%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           K N++ Y+S    F    D ++A  LF  ++ Q   P  + FN I+  L K+        
Sbjct: 49  KINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLY 108

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M   G++P+    N L++ FC  G +  A  +F  +  MG      +++ LI G C
Sbjct: 109 LSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLC 168

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
              +I  AL+ + ++++ G + + + + TL  GL ++ +   A  L   +    V  +  
Sbjct: 169 LKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVV 228

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            Y T IDG+CK+ ++ +A +L+  +       ++  Y++LI G    G+L+ A++LF  +
Sbjct: 229 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKM 288

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               + P+V T++I++   C  G++  A  L  +M +    PN++T+  ++    + +  
Sbjct: 289 ISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRV 348

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVD 457
            K + LL K+K+  + P+    +I++D
Sbjct: 349 DKAVALLTKLKDQGIRPNMHTYTILID 375



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 131/256 (51%)

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y++    F     V+ A  LF  +           ++ ++    K+K     L L  +M 
Sbjct: 55  YSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKME 114

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +GIKP++V  N L     ++  +  AF +F ++ + G   +T T+ T I GLC  G I 
Sbjct: 115 FRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIH 174

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A+     L  L  +F+  +Y +LIDGLCK G    AL+L R +   ++ PNVV YS +I
Sbjct: 175 QALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTII 234

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G+C D  ++ A DL+ +M    + PNV+T+  LI GF  + +    ++L +KM   N+ 
Sbjct: 235 DGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIK 294

Query: 447 PDASIVSIVVDLLAKN 462
           PD    +I+VD+  K+
Sbjct: 295 PDVYTFNILVDVFCKS 310



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 146/296 (49%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N++ ++        N  +D+A  L + +++    P A  +N +L     +   +    L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             ME  G K  + + +ILIN +C+   I  A S+++++L  G  P+ +   TL  GL   
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            Q+ +A    D++   G   +  +Y T IDGLCK G    A++L   +     + ++  Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           +++IDG+CK   +  A +L+  +    + PNVVTYS +I G    G++  A DLF  M  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             + P+V TF++L+  F +  + S  ++L+ +M +    P+    S ++D L K  
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTH 346


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 118/319 (36%), Positives = 176/319 (55%), Gaps = 6/319 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA+T+  +++ LC   RI +A A   ++   G +PD F Y  +++GLC+      A  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE+M            PN VTY T+I+GLCK   ++ A EL  +M  K   P  V+Y ++
Sbjct: 67  FEKMVKQR------INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GFC  KD   AK +F +M+     PNVVT+  ++D L K+GK+  A+ +LD M++ GV
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TY+ L+DGFC   RV+ A +L   M + G   TV +Y+IL+N  C+  ++E A  
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+  M  +   P VV +NTL   L    Q++ A +L+ EM   G   D  TY T   GL 
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 300

Query: 321 KNGYIVEAVELFHTLRILK 339
           + G + EA EL   +++ K
Sbjct: 301 RAGKVHEAQELMEKMKLTK 319



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 167/310 (53%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+ +TY  ++   C  K  ++A     EM  +G++P+   +N ++  LC+  K++EA  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            + M++  + P+  TYNTL++G C   R+  A ELF  M   G   T  SY+ LI+G+CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            K++  A  ++ +M+     P+VV + TL  GL +  +V+ A ++ D M + GV  +  T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y   IDG CK   + EA +L   +        +  YN L++ LC++ +LE A +LFR + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
                P VVTY+ ++  LC+  Q+D A  L+ +M      P+ IT+D L  G  R  +  
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 432 KVIELLHKMK 441
           +  EL+ KMK
Sbjct: 307 EAQELMEKMK 316



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 167/310 (53%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+ +TY  I++ LCK   +D A   + +M  + IKP+   Y  V+ G C  +   EA+ L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F +M+ Q + PNVVT+N +++ LCK  +++ A  L   M   G  P   +YNTL+DGFC 
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
              +  AK++F  M    C   V +Y+ LI+G  K+ +++ A  +   M+ KG+ P+V  
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           ++ L  G  ++ +V+ A KL ++M   G+A    TY   ++ LC+   + +A +LF  + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             +C   +  YN+L+  LC   +L+ A  L+  +      P+ +TY  +  GL   G++ 
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 397 KARDLFLDME 406
           +A++L   M+
Sbjct: 307 EAQELMEKMK 316



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 160/315 (50%), Gaps = 6/315 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PD  TY  +V  LC+T     AL   EEMA          +P+   Y  ++ GLC+E  V
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRG------IKPDAFIYNFVLSGLCQEEKV 60

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           ++A+ L  +M  + I PNVVTY ++I G C A     A  LF EM  +G  P  V++N +
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D  CK   +  A  + D M++    P+  TY TL+DG   +G+V  A E+   M   G 
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +YS LI+G+CK + ++ A  L  +M+++GI P VV +N L   L    ++E AFK
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           LF  M +        TY T +  LC +  +  A  L+  +    C  D   Y++L  GL 
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 300

Query: 356 KSGRLEIALELFRSL 370
           ++G++  A EL   +
Sbjct: 301 RAGKVHEAQELMEKM 315



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 143/263 (54%), Gaps = 6/263 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V    ++  +++K    P+ VT+ +LI GLC   RI  A  LF ++   G  P   +Y 
Sbjct: 59  KVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYN 118

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++G C+    + A ++F++M   N      C PN VTYTT+IDGL K G V  A E+L
Sbjct: 119 TLIDGFCKKKDLVAAKDVFDKMVRSN------CVPNVVTYTTLIDGLSKSGKVQAAAEVL 172

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M  K + PNV TY+ +I GFC  +  +EA +L  +M+ QG+ P VVT+N++++ LC+ 
Sbjct: 173 DGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRA 232

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K+++A +L   M Q    P   TYNTLL   C   +++ A  L+  M + GC     +Y
Sbjct: 233 DKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITY 292

Query: 243 SILINGYCKNKEIEGALSLYSEM 265
             L  G  +  ++  A  L  +M
Sbjct: 293 DTLAWGLTRAGKVHEAQELMEKM 315



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 155/319 (48%), Gaps = 9/319 (2%)

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           M +   P+ +T+  I++ LCK  ++D+A   ++ M   G++PDAF YN +L G C   +V
Sbjct: 1   MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 60

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A+ LF  M        V +Y+ LING CK   IE A  L+ EM  KG  P  V +NTL
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G  +   +  A  +FD+M R+    +  TY T IDGL K+G +  A E+   +     
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             ++  Y+ LIDG CK  R++ A +L   +    + P VVTY+I++  LC   +++ A  
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           LF  M +    P V+T++ L+R      +      L  +M      PDA    I  D LA
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDA----ITYDTLA 296

Query: 461 KNEISLNSLPSFTVHEQQE 479
                        VHE QE
Sbjct: 297 WGLTRAGK-----VHEAQE 310



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 6/159 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     VL  ++K   TP+  T++ LI G C   R+ EA  L  ++   G  P V TY
Sbjct: 163 GKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTY 222

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N LCR      A  LF  MA         C P  VTY T++  LC    +D A  L
Sbjct: 223 NILLNSLCRADKLEDAFKLFRGMAQRR------CHPTVVTYNTLLRALCHHKQLDGAHRL 276

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
             +M  K   P+ +TY ++  G   A   +EA+ L  +M
Sbjct: 277 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 237/488 (48%), Gaps = 35/488 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+    + V+  ++ + F PD  T++ +I  LC  SR+  A  LF +++  G  PDV+TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++   +      A N  +EM          CEP  VTYTT+I    K   V  A EL
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDG------CEPTVVTYTTLIHAYLKAKKVSVANEL 581

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM----------------DQGV 165
              M  K   PNV+TYT++I G+C + +  +A +++  M                 +   
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +PNVVT+  ++D LCK  K+ +A  LL+ M   G  P+   Y+ L+DGFC   +++ A+E
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F  M   G    V++YS LI+   K+K ++  L + S+ML     P++VI+  +  GL 
Sbjct: 702 VFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           ++ + + A+KL   M+  G   +  TY   IDG  K G + + +ELF  +    C  +  
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y  LI+  C +G L+ A  L   +       +V +Y  +I G   +  +  +  L  ++
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEV 879

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
           E+N   P ++ + +LI  F++       +E LHK           ++S  + + AK  + 
Sbjct: 880 EKNGSAPIILLYKVLIDNFVKAGRLEVALE-LHK----------EVISASMSMAAKKNLY 928

Query: 466 LNSLPSFT 473
            + + SF+
Sbjct: 929 TSLIYSFS 936



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 214/462 (46%), Gaps = 21/462 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           I + C+ P    F SL+   C       A  L  K+    C+P    Y  L+  +C    
Sbjct: 370 IAEGCY-PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 428

Query: 74  T--IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
               V   L E+  N     G V   N V   +    LC  G  +KA +++ +M      
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVL--NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFV 486

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+  TY+ VI   C A     A  LF EM   GV P+V T+ +++D   K G + +A   
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
           LD M++ G  P   TY TL+  +    +V+ A ELF  M + GC   V +Y+ LI+GYCK
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606

Query: 252 NKEIEGALSLYSEMLSKGI----------------KPDVVIHNTLFVGLFEIHQVERAFK 295
           +  IE A  +Y+ M                     KP+VV +  L  GL + H+V+ A  
Sbjct: 607 SGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARD 666

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L + M  +G   +T  Y   IDG CK   + EA E+FH +       ++  Y+SLID L 
Sbjct: 667 LLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLF 726

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           K  RL++ L++   +      PN+V Y+ MI GL    + D+A  L L MEE    PNV+
Sbjct: 727 KDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVV 786

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           T+  +I GF +  +  K +EL  +M      P+    +++++
Sbjct: 787 TYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 231/462 (50%), Gaps = 26/462 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +      L  +++    P  VT+T+LI       ++  A  LF  +   GC P+V TY
Sbjct: 538 GIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEF-----------GVVCEPNTVTYTTIIDGLC 110
           T L++G C++ +   A  ++  M  G+ +             V  +PN VTY  ++DGLC
Sbjct: 598 TALIDGYCKSGNIEKACQIYARM-RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLC 656

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K   V  A++LL  M     +PN + Y ++I GFC A   +EA+ +F +M++ G  PNV 
Sbjct: 657 KAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVY 716

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T++ ++D L K+ ++D   ++L  M+++   P+   Y  ++DG     + + A +L + M
Sbjct: 717 TYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMM 776

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
           E  GCK  V +Y+ +I+G+ K  +++  L L+ EM SKG  P+ V +  L         +
Sbjct: 777 EEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHL 836

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI-----VEAVELFHTLRILKCEFDIR 345
           + A+ L +EM++        +Y   I+G  K  +I     +E VE   +  I      I 
Sbjct: 837 DEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFILSLGLLEEVEKNGSAPI------IL 889

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCG--VLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
            Y  LID   K+GRLE+ALEL + +      +      Y+ +I       ++  A +LF 
Sbjct: 890 LYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFY 949

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           DM  + V+P++ TF  L+ G IR+    + ++L   + ++++
Sbjct: 950 DMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 221/474 (46%), Gaps = 28/474 (5%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
            L  I K  F P+ + +  +I GLC  S   EA     ++R   C P+V TY  L+ G C
Sbjct: 295 ALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG-C 353

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                +        M    G     C P+   + +++   CK      A +LL +M+   
Sbjct: 354 LNKKQLGRCKRILSMMIAEG-----CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE 408

Query: 130 IKPNVVTYTSVIRGFCYAKD------WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            KP  V Y  +I   C   +      +  A++ + EM+  G   N V        LC  G
Sbjct: 409 CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFG 468

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K ++A +++  M+ +G  PD  TY+ ++   C   RV +A  LF  M+  G    V++Y+
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           ILI+ + K   I+ A +   EM+  G +P VV + TL     +  +V  A +LF+ M   
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR------ILKCEFDIR----------AY 347
           G   +  TY   IDG CK+G I +A +++  +R       +   F I+           Y
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +L+DGLCK+ +++ A +L  ++      PN + Y  +I G C   ++D+A+++F  M E
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +   PNV T+  LI    +      V+++L KM E +  P+  I + ++D L+K
Sbjct: 709 HGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 219/513 (42%), Gaps = 72/513 (14%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LGR+    + P  +T+ +L++      ++  A  +  ++   G   D FT       LC+
Sbjct: 229 LGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCK 288

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 AL+L E+      +F     PNT+ Y  +I GLC+  F ++A + L +M+  + 
Sbjct: 289 VGKWREALSLIEK-----EDF----VPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSC 339

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PNV TY  ++ G    K     KR+   M+ +G  P+   FN ++   CK+     A +
Sbjct: 340 IPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYK 399

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRV------NHAKELFVSMESMGC---KHTVFS 241
           LL  M +   +P    YN L+   C  G +        A++ +  M S G    K  V S
Sbjct: 400 LLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVS 459

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++  + G+ K    E A  +  EM+  G  PD   ++ +   L    +VE AF LF EM+
Sbjct: 460 FARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMK 516

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAV-------------------------------- 329
             GV  D +TY   ID   K G I +A                                 
Sbjct: 517 GTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS 576

Query: 330 ---ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP--------- 377
              ELF  +    C  ++  Y +LIDG CKSG +E A +++  +     +P         
Sbjct: 577 VANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636

Query: 378 -------NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                  NVVTY  ++ GLC   ++  ARDL   M  +   PN I +D LI GF +  + 
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            +  E+ HKM E    P+    S ++D L K++
Sbjct: 697 DEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDK 729



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 123/297 (41%), Gaps = 15/297 (5%)

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
            NV++ + C+NG  + A   L  +   G +P   TYN L+  F    +++ A+ +   M 
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
            +G     F+        CK  +   ALSL  +   +   P+ +++N +  GL E    E
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFE 325

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A    + M+      +  TYR  + G      +     +   +    C      +NSL+
Sbjct: 326 EAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLV 385

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM---------DKARDLF 402
              CKS     A +L + +      P  V Y+I+IG +C+ G++         +KA +  
Sbjct: 386 HAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEM 445

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           L         NV++F   + GF +  +  KVI   H+M     +PD S  S V+  L
Sbjct: 446 LSAGTVLNKVNVVSFARCLCGFGKFEKAYKVI---HEMMGNGFVPDTSTYSEVIGFL 499


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 223/483 (46%), Gaps = 58/483 (12%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F++   + +     D  T+T ++   C    I +A   F ++R  GC P+V TYT L++
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM- 125
              +      A  LFE M +        C PN VTY+ +IDG CK G ++KA ++  +M 
Sbjct: 562 AYLKAKKVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQMEKACQIFERMC 615

Query: 126 ----------------KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
                            D + +PNVV Y +++ GFC      EA++L   M  +G +PN 
Sbjct: 616 GSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQ 675

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           + ++ ++D LCK GK+DEA  +   M +HG     +TY++L+D +    R + A ++   
Sbjct: 676 IVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 735

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M    C   V  Y+ +I+G CK  + + A  L   M  KG +P+VV +  +  G   I +
Sbjct: 736 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGK 795

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           +E   +L + M   GVA +  TYR  ID  CKNG +  A  L   ++          Y  
Sbjct: 796 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRK 855

Query: 350 LIDG---------------------------------LCKSGRLEIALELFRSLP--CGV 374
           +I+G                                 L K+ RLE+AL L   +      
Sbjct: 856 VIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSAT 915

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           LV    TY+ +I  LC   ++DKA  LF +M +  V+P + TF  LI+G  R ++ S+ +
Sbjct: 916 LVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEAL 975

Query: 435 ELL 437
            LL
Sbjct: 976 LLL 978



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 224/468 (47%), Gaps = 22/468 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC--RT 71
           +++ C+ P    F SL+   C       A  L  K+   G  P    Y  L+  +C  + 
Sbjct: 364 MMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKD 422

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
           S +   L L E+  +     GVV   N +  ++    LC  G  +KA  ++ +M  +   
Sbjct: 423 SLSCHLLELAEKAYSEMLATGVVL--NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P+  TY+ V+   C A     A  LF EM   G+  +V T+ +++D  CK G +++A + 
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
            + M + G  P+  TY  L+  +    +V++A ELF +M S GC   + +YS LI+G+CK
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 252 NKEIEGALSLYSEML-SKGI----------------KPDVVIHNTLFVGLFEIHQVERAF 294
             ++E A  ++  M  SK +                +P+VVI+  L  G  ++H+VE A 
Sbjct: 601 AGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEAR 660

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           KL D M   G   +   Y   IDGLCK G + EA E+   +        +  Y+SLID  
Sbjct: 661 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRY 720

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            K  R ++A ++   +      PNVV Y+ MI GLC  G+ D+A  L   MEE    PNV
Sbjct: 721 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 780

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +T+  +I GF RI +    +ELL +M    V P+     +++D   KN
Sbjct: 781 VTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 828



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 224/483 (46%), Gaps = 32/483 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  S     LGR+    F P   T+  LI+       +  A+ +  ++ +     D FT 
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTL 273

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
                 LC+      AL L E       E  V   P+TV YT +I GLC+    ++A + 
Sbjct: 274 RCYAYSLCKVGKWREALTLMET------ENFV---PDTVFYTKLISGLCEASLFEEAMDF 324

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+  +  PNVVTY++++ G    K     KR+   MM +G  P+   FN ++   C 
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC------LTGRVNHAKELFVSMESMGC 235
           +G    A +LL  M++ G  P    YN L+   C          +  A++ +  M + G 
Sbjct: 385 SGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGV 444

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                + S      C   + E A S+  EM+ +G  PD   ++ +   L    ++E AF 
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFL 504

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           LF+EM+R G+ AD +TY   +D  CK G I +A + F+ +R + C  ++  Y +LI    
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF-----------LD 404
           K+ ++  A ELF ++     +PN+VTYS +I G C  GQM+KA  +F           +D
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVD 624

Query: 405 M------EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           M      ++N+  PNV+ +  L+ GF +++   +  +LL  M      P+  +   ++D 
Sbjct: 625 MYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 684

Query: 459 LAK 461
           L K
Sbjct: 685 LCK 687



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 169/357 (47%), Gaps = 45/357 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V + +L+ G C   R+ EA  L   + + GCEP+   Y  L++GLC+      A  +
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697

Query: 81  FEEMANG-------------NGEFGV----------------VCEPNTVTYTTIIDGLCK 111
             EM+               +  F V                 C PN V YT +IDGLCK
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G  D+A +L+  M++K  +PNVVTYT++I GF           L   M  +GV PN VT
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM- 230
           + V++D  CKNG +D A  LL+ M Q      A  Y  +++GF         KE   S+ 
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--------NKEFIESLG 869

Query: 231 --ESMGCKHT---VFSYSILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIHNTLFVG 283
             + +G   T   +  Y +L++   K + +E AL L  E+   S  +      +N+L   
Sbjct: 870 LLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 929

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
           L   ++V++AF+LF EM + GV  +  T+ + I GL +N  I EA+ L   +  + C
Sbjct: 930 LCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMVC 986



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 174/439 (39%), Gaps = 52/439 (11%)

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGE-FGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y  LV+ + R     V   L +++ + + E FG            ++   C+ G    A 
Sbjct: 168 YNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEF-------LNVLVRKYCRSGSFSIAL 220

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E L ++KD   +P+  TY  +I+ F  A   + A  +  EM    ++ +  T       L
Sbjct: 221 EELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSL 280

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK GK  EA   L LM      PD   Y  L+ G C       A +    M +  C   V
Sbjct: 281 CKVGKWREA---LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 337

Query: 240 FSYSILING-----------------------------------YCKNKEIEGALSLYSE 264
            +YS L+ G                                   YC + +   A  L  +
Sbjct: 338 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKK 397

Query: 265 MLSKGIKPDVVIHNTLFVGL------FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           M+  G  P  V++N L   +         H +E A K + EM   GV  +     +F   
Sbjct: 398 MVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRC 457

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LC  G   +A  +   +       D   Y+ ++  LC + ++E+A  LF  +  G LV +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V TY+IM+   C  G +++AR  F +M E    PNV+T+  LI  +++  + S   EL  
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 439 KMKEINVMPDASIVSIVVD 457
            M     +P+    S ++D
Sbjct: 578 TMLSEGCLPNIVTYSALID 596



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 132/300 (44%), Gaps = 10/300 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V   + +  F     T++SLI       R   A+ + +K+    C P+V  
Sbjct: 688 VGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 747

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT +++GLC+   T  A  L + M          C+PN VTYT +IDG  + G ++   E
Sbjct: 748 YTEMIDGLCKVGKTDEAYKLMQMMEEKG------CQPNVVTYTAMIDGFGRIGKIETCLE 801

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  K + PN VTY  +I   C     + A  L  EM       +   +  +++   
Sbjct: 802 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF- 860

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            N +  E+  LLD + Q    P    Y  L+D      R+  A  L   + +       +
Sbjct: 861 -NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDY 919

Query: 241 S--YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           S  Y+ LI   C   +++ A  L+SEM  KG+ P++    +L  GLF   ++  A  L D
Sbjct: 920 SSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLD 979



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 3/225 (1%)

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           ++L+  YC++     AL     +     +P    +N L     +   ++ A  +  EM  
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +  D +T R +   LCK G   EA+ L  T   +    D   Y  LI GLC++   E 
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVP---DTVFYTKLISGLCEASLFEE 320

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A++    +     +PNVVTYS ++ G  N  Q+ + + +   M      P+   F+ L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
            +    + S   +LL KM +    P   + +I++  +  ++ SL+
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLS 425



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 106/257 (41%), Gaps = 65/257 (25%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL- 68
           VL ++L++   P+ V +T +I GLC   +  EA  L   +   GC+P+V TYT +++G  
Sbjct: 732 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 791

Query: 69  ----------------------------------CRTSHTIVALNLFEEM--------AN 86
                                             C+     VA NL EEM        A 
Sbjct: 792 RIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAA 851

Query: 87  G--------NGEF----GVVCE-------PNTVTYTTIIDGLCKEGFVDKAKELLLQMK- 126
           G        N EF    G++ E       P    Y  ++D L K   ++ A  LL ++  
Sbjct: 852 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVAT 911

Query: 127 -DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
               +     TY S+I   C A   ++A RLF EM  +GV P + TF  ++  L +N K+
Sbjct: 912 FSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKI 971

Query: 186 DEASRLLDLMIQHGVRP 202
            EA  LLD  I H V P
Sbjct: 972 SEALLLLDF-ISHMVCP 987


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 226/439 (51%), Gaps = 6/439 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +  +++     P+A+T+  L+ GLC   R+ E +AL  ++      PD FTY
Sbjct: 64  GDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 123

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L +GL R   +   L+LF +        G        T + +++GLCK+G V  A+E+
Sbjct: 124 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIG------DYTCSILLNGLCKDGKVSIAEEV 177

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  + +  + P  V Y ++I G+C   +   A   F +M  + ++P+ +T+N +++ LCK
Sbjct: 178 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 237

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++  A  LL  M  +GV P   T+NTL+D +  TG++     +   M+  G K  V S
Sbjct: 238 AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 297

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  ++N +CKN +I  A+++  +M  K + P+  ++N +     E    ++AF L ++M+
Sbjct: 298 YGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 357

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG++    TY   I GLC    I EA E+ ++L   +   D  +YN+LI   C  G ++
Sbjct: 358 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 417

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL+L + +    +   V TY  +I GL   G++++   L+  M +N VVP+    ++++
Sbjct: 418 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 477

Query: 422 RGFIRINEPSKVIELLHKM 440
             + +     K  +L  +M
Sbjct: 478 EAYSKYGNEIKAEDLRKEM 496



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 231/502 (46%), Gaps = 49/502 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A ++  +I G+    R  +A  +F ++      P+  TY T+++G  +         L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 81  FEEMANGNGEFGVVC---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
            ++M         VC   +PN +TY  ++ GLC+ G + +   LL +M  + + P+  TY
Sbjct: 73  RDQM---------VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 123

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           + +  G     D      LF + +  GV     T +++++ LCK+GK+  A  +L  ++ 
Sbjct: 124 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 183

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ P    YNTL++G+C TG +  A   F  M+S   K    +Y+ LING CK + I  
Sbjct: 184 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 243

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L  EM   G+ P V   NTL        Q+E+ F +  EMQ NG+  +  +Y + ++
Sbjct: 244 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 303

Query: 318 GLCKNGYIVEAV----ELFH-----TLRILKCEFD------------------------- 343
             CKNG I EAV    ++FH       ++     D                         
Sbjct: 304 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 363

Query: 344 -IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
            I  YN LI GLC   ++  A E+  SL    L+P+ V+Y+ +I   C  G +DKA DL 
Sbjct: 364 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 423

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK- 461
             M +  +   V T+  LI G       +++  L  KM + NV+P  +I +I+V+  +K 
Sbjct: 424 QRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKY 483

Query: 462 -NEISLNSLPSFTVHEQQEEVD 482
            NEI    L    + ++    D
Sbjct: 484 GNEIKAEDLRKEMLQKRNNHDD 505



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 152/301 (50%)

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           D    PN  ++NV++  + + G+  +A  + D M +  V P+  TYNT++DG    G + 
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
               L   M   G K    +Y++L++G C+   +    +L  EM S+ + PD   ++ LF
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL      +    LF +  +NGV    +T    ++GLCK+G +  A E+  +L      
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
                YN+LI+G C++G LE A   F  +    + P+ +TY+ +I GLC   ++  A+DL
Sbjct: 188 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++M++N V P V TF+ LI  + R  +  K   +L +M+E  + P+      +V+   K
Sbjct: 248 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 307

Query: 462 N 462
           N
Sbjct: 308 N 308



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 41/231 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAA----------------- 44
           G++   F+VL  + ++   P+ V++ S++   C   +I EA A                 
Sbjct: 274 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 333

Query: 45  ------------------LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
                             L  K++  G  P + TY  L+ GLC  S    A    EE+ N
Sbjct: 334 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA----EEIIN 389

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                 ++  P+ V+Y T+I   C  G +DKA +L  +M    IK  V TY  +I G   
Sbjct: 390 SLSNHRLI--PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 447

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           A   NE + L+ +MM   V P+    N++++   K G   +A  L   M+Q
Sbjct: 448 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 498


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/406 (33%), Positives = 201/406 (49%), Gaps = 41/406 (10%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL---------------- 68
           ++T+++ GLC +  ++ A AL  +L   G +P V TY TL+NG                 
Sbjct: 190 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLM 249

Query: 69  -------------------CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL 109
                               R+S    A  LF+EM           EP+   YT+II+  
Sbjct: 250 EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKG------IEPDVYIYTSIINWN 303

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           CK G + +A  L  +M ++ + PN  TY ++I G C A +   A+ +  +M  +GV  N 
Sbjct: 304 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNR 363

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           V FN +MD  CK G +DEA RL ++M Q G   DAFT N +  GFC + R   AK L ++
Sbjct: 364 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 423

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           ME  G    V S+SILI+ YCK +    A  L+  M  KG  P VV +N       +  +
Sbjct: 424 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 483

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           +E A+KL +EMQ  G+  DT+TY + IDG   +G +  A+ELF+ +  L    ++  Y  
Sbjct: 484 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 543

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           +I GL K GR + A +L+  +    +VP+   YS +I  L   G +
Sbjct: 544 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 209/412 (50%), Gaps = 12/412 (2%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGL 109
           G E  V ++T +V+GLC+    + A  L +E+         VC+   P+ +TY T+++G 
Sbjct: 183 GIEIRVCSWTAVVDGLCKKGEVVRAKALMDEL---------VCKGFKPSVITYNTLLNGY 233

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
            +   V    E+L  M+   +  NV TYT +I  +  +    EA++LF EM+ +G++P+V
Sbjct: 234 IEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDV 293

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
             +  I++  CK G M  A  L D M +  + P+A+TY  L++G C  G +  A+ +   
Sbjct: 294 YIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVND 353

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M+S G       ++ L++GYCK   I+ AL L + M  KG + D    N +  G    ++
Sbjct: 354 MQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNR 413

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
            E A +L   M+  GVA +  ++   ID  CK     EA  LF  +        +  YN+
Sbjct: 414 REEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNA 473

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
            I+  CK G++E A +L   +    L+P+  TY+ +I G    G +D+A +LF +M +  
Sbjct: 474 FIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLG 533

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  NV+T+ ++I G  +     +  +L  +M +  ++PD  I S ++  L K
Sbjct: 534 LNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 585



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 143/300 (47%)

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           L ++G M+     L  M+  G+     ++  ++DG C  G V  AK L   +   G K +
Sbjct: 163 LKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPS 222

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +Y+ L+NGY + K++ G   + S M    +  +V  +  L        ++E A KLFD
Sbjct: 223 VITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFD 282

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM + G+  D + Y + I+  CK G +  A  LF  +   +   +   Y +LI+G CK+G
Sbjct: 283 EMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAG 342

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
            ++ A  +   +    +  N V ++ ++ G C  G +D+A  L   M++     +  T +
Sbjct: 343 EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCN 402

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           ++  GF R N   +   LL  M+E  V P+    SI++D+  K +    +   F V E++
Sbjct: 403 IIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKK 462


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 219/444 (49%), Gaps = 32/444 (7%)

Query: 12  GRILKSCF----TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           GR+++  F     P+  TF  +I  LC E  + EA +LF++++  GC PDV T+ +L++G
Sbjct: 173 GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDG 232

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
             +         L EEM          C+ + VTY  +I+  CK G ++ A      MK 
Sbjct: 233 YGKCGELDEVEQLVEEMRRSG------CKADVVTYNALINCFCKFGRMETAYGYFAAMKR 286

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + +  NVVT+++ +  FC      EA +LF +M  +G+  N  T+  ++D  CK G++D+
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDD 346

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  LLD M++ GV  +  TY  L+DG C   +V  A+++   ME  G +     Y+ LI+
Sbjct: 347 AIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIH 406

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+  NK  E AL L SEM +KG++ D+ ++  L  GL  +H+++ A  L  +M  +G+  
Sbjct: 407 GHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466

Query: 308 DTWTYRTFIDGLCK----------------------NGYIVEAVELFHTLRILKCEFDIR 345
           +   Y T +D   K                      NG + EAV+LF+ +       D  
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKV 526

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            Y +L+DG  K G L  A  L   +    L  ++  Y+  I G CN   M +AR++F +M
Sbjct: 527 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 586

Query: 406 EENAVVPNVITFDMLIRGFIRINE 429
             + + P+   ++ LI     I E
Sbjct: 587 IGHGIAPDRAVYNCLITQIPEIRE 610



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 189/391 (48%), Gaps = 10/391 (2%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           A    +L+  L     + +A     ++R     P+  T   ++  L R     +   LFE
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           ++            PN  T+  +ID LCKEG + +A+ L  +MK+    P+VVT+ S+I 
Sbjct: 182 QLP----------APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+    + +E ++L  EM   G + +VVT+N +++  CK G+M+ A      M + GV  
Sbjct: 232 GYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           +  T++T +D FC  G V  A +LF  M   G     F+Y+ LI+G CK   ++ A+ L 
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM+ +G+  +VV +  L  GL +  +V  A  +   M++ GV A+   Y T I G   N
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
               +A+ L   ++    E DI  Y +LI GLC   +L+ A  L   +    L PN + Y
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           + M+      G++ +A  +   + ++   PN
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPN 502



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 182/362 (50%), Gaps = 4/362 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PNT T   I+  L +    D++  L+ ++ ++   PNV T+  VI   C   +  EA+ L
Sbjct: 155 PNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSL 210

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F  M + G  P+VVTFN ++D   K G++DE  +L++ M + G + D  TYN L++ FC 
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR+  A   F +M+  G    V ++S  ++ +CK   +  A+ L+++M  +G+  +   
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +  L  G  +  +++ A  L DEM R GV  +  TY   +DGLCK   + EA ++   + 
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 +   Y +LI G   +   E AL L   +    L  ++  Y  +I GLCN  ++D
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A+ L   M+E+ + PN I +  ++    +  +  + I +L K+ +    P+   ++  V
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAV 510

Query: 457 DL 458
            L
Sbjct: 511 QL 512



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 179/354 (50%), Gaps = 4/354 (1%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           T++  L   G +D A   + ++++  + PN  T   ++      +     +RLF    +Q
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF----EQ 182

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
              PNV TFN+++D LCK G++ EA  L   M + G  PD  T+N+L+DG+   G ++  
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           ++L   M   GCK  V +Y+ LIN +CK   +E A   ++ M  +G+  +VV  +T    
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
             +   V  A KLF +M+  G+A + +TY   IDG CK G + +A+ L   +       +
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y  L+DGLCK  ++  A ++ R +    +  N + Y+ +I G   +   +KA  L  
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +M+   +  ++  +  LI+G   +++  +   LL KM E  + P+  I + ++D
Sbjct: 423 EMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD 476



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 169/350 (48%), Gaps = 19/350 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+   +     + +     + VTF++ +   C E  + EA  LF ++RV G   + FTY
Sbjct: 272 GRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTY 331

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++G C+      A+ L +EM             N VTYT ++DGLCKE  V +A+++
Sbjct: 332 TCLIDGTCKAGRLDDAIVLLDEMVRQGVPL------NVVTYTVLVDGLCKERKVAEAEDV 385

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+   ++ N + YT++I G    K+  +A  L  EM ++G++ ++  +  ++  LC 
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+DEA  LL  M + G+ P+   Y T++D    +G+V          E++     +  
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP---------EAIAMLQKILD 496

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
                N  C N+    A+ L++EM+ KG+  D V++  L  G  +   +  AF L  +M 
Sbjct: 497 SGFQPNNGCLNE----AVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 552

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            +G+  D + Y  FI G C    + EA E+F  +       D   YN LI
Sbjct: 553 DSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 132/312 (42%), Gaps = 65/312 (20%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+    V+L  +++     + VT+T L+ GLC E ++ EA  +   +   G   +   Y
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++G     ++  AL L  EM N   E  +        Y  +I GLC    +D+AK L
Sbjct: 402 TTLIHGHFMNKNSEKALGLLSEMKNKGLELDIS------LYGALIQGLCNVHKLDEAKSL 455

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKD-----------------------WNEAKRLFI 158
           L +M +  ++PN + YT+++   C+                           NEA +LF 
Sbjct: 456 LTKMDESGLEPNYIIYTTMMDA-CFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFN 514

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           EM+ +G+  + V +  ++D   K G + +A  L   MI  G++ D F Y   + GFC   
Sbjct: 515 EMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLN 574

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            +  A+E+F                                   SEM+  GI PD  ++N
Sbjct: 575 MMPEAREVF-----------------------------------SEMIGHGIAPDRAVYN 599

Query: 279 TLFVGLFEIHQV 290
            L   + EI ++
Sbjct: 600 CLITQIPEIREL 611



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%)

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           +N +ID LCK G L  A  LF  +     +P+VVT++ +I G    G++D+   L  +M 
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
            +    +V+T++ LI  F +             MK   VM +    S  VD   K  +  
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 467 NSLPSFT 473
            ++  F 
Sbjct: 311 EAMKLFA 317


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 235/469 (50%), Gaps = 6/469 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +L +   PD+  +TS + G C    +  A  +F  + + GC    FTYT L++GL  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 A+ +F  M   +      C P+T  Y T++ GLC+ G  ++A+ LL +      
Sbjct: 155 AGMVREAMTVFVGMRADS------CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGF 208

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +PN+V Y ++I G+C A +   A ++F  M      PNV T+  ++  LCK+GK++ A  
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M++ G+ P+  TY  L+ G C  G +  A  L   ME+ G     +++S+LI+  C
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K +++E A      ++ KG+K + V++ +L  GL +  +++ A +L  +M   G   D  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           +Y + IDGLC+   + +A  +   +     +     Y  +ID L +    E   ++F  +
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               + P++VTY++ +   C +G+M+ A  + + M +  V PN++T++ LIRG+  +   
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           S+       M      P+    ++++ L+ K   S NS+  + + + ++
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKD 557



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 224/464 (48%), Gaps = 19/464 (4%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           V +G    SC  PD   + +++ GLC   R  EA  L  +    G EP++  Y  L++G 
Sbjct: 164 VFVGMRADSC-APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGY 222

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C       AL +FE M +GN      C PN  TYT +I GLCK G V++A  L  +M + 
Sbjct: 223 CNAGEMEHALKVFEGM-DGNR-----CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            ++PNVVTYT++I+G C       A RL   M   G+ PN  TF+V++D LCK  K++EA
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
              L  +++ GV+ +   Y +L+DG C TG+++ A EL   M S G      SYS LI+G
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C+ K++  A  +  +M+ KGI+   V +  +   L      E   K+FD+M   G+  D
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY  F+   C+ G + +A  +   +       ++  YN+LI G    G +  A   F 
Sbjct: 457 IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFE 516

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF--LDMEENAVVPNVIT---------- 416
            +      PN  +Y++++  +      D + D++   DM++  V+   IT          
Sbjct: 517 VMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADI 576

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           +   IR   R++   +       M+  N+ P   + + ++D  A
Sbjct: 577 YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCA 620



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 197/397 (49%), Gaps = 6/397 (1%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TYTTL+N  C       A      + +          P++  YT+ + G C+ G +  A 
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAG------LAPDSYAYTSFVLGYCRAGMLTHAC 127

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            + + M  +       TYT+++ G   A    EA  +F+ M      P+   +  ++  L
Sbjct: 128 RVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGL 187

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+ G+ +EA  LL+  + +G  P+   YN L+DG+C  G + HA ++F  M+   C   V
Sbjct: 188 CEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNV 247

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+G CK+ ++E A+ L+S M+  G++P+VV +  L  G      ++ AF+L   
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL 307

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+ NG+  + WT+   ID LCK   + EA     +L     + +   Y SLIDGLCK+G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A EL + +     VP+  +YS +I GLC   ++ +A  +  DM E  +  + +T+ +
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +I   +R        ++  KM    + PD    ++ V
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFV 464



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 204/429 (47%), Gaps = 28/429 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR     V+L   + + F P+ V + +LI G C    +  A  +F  +    C P+V TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++GLC++     A+ LF  M     E G+  EPN VTYT +I G C EG +  A  L
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMV----EAGL--EPNVVTYTALIQGQCNEGHLQCAFRL 304

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+   + PN  T++ +I   C  +   EA+     ++ +GV+ N V +  ++D LCK
Sbjct: 305 LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCK 364

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+D A  L+  MI  G  PDA +Y++L+DG C   +++ A  +   M   G + +  +
Sbjct: 365 TGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+I+   +    EG   ++ +M++ GI PD+V +        E  ++E A  +  +M 
Sbjct: 425 YTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  +  TY T I G    G + +A   F  +     + +  +Y  L+  + K    +
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSD 544

Query: 362 IALELF-----------------RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            +++++                 R LP    +     YS  I  LC   ++++A+  F+ 
Sbjct: 545 NSVDIWKIADMKDLQVLLEDITERQLPLAADI-----YSCFIRCLCRVDRLEEAKHFFMG 599

Query: 405 MEENAVVPN 413
           M+   + P+
Sbjct: 600 MQNANLTPS 608



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 192/399 (48%), Gaps = 22/399 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + H   V   +  +  +P+  T+T LI GLC   ++  A  LF+++   G EP+V TY
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ G C   H   A  L   M       G+V  PN  T++ +ID LCK   V++A+  
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETN----GLV--PNDWTFSVLIDALCKREKVEEAQLF 339

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  +  K +K N V YTS+I G C     + A  L  +M+ +G  P+  +++ ++D LC+
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             K+ +A+ +L+ M++ G++    TY  ++D           K++F  M + G    + +
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++ +  YC+   +E A S+  +M+ +G+ P++V +NTL  G   +  V +AF  F+ M 
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFH--------------TLRILKCEFDIRAY 347
             G   +  +Y   +  + K      +V+++               T R L    DI  Y
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADI--Y 577

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +  I  LC+  RLE A   F  +    L P+   Y+ +I
Sbjct: 578 SCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 173/367 (47%), Gaps = 4/367 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P      T++  L +       + L  +M  +N++    TYT++I  +C A D   AK+ 
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              ++  G+ P+   +   +   C+ G +  A R+  LM   G    AFTY  LL G   
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G V  A  +FV M +  C      Y+ +++G C+    E A  L  E +S G +P++V+
Sbjct: 155 AGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L  G     ++E A K+F+ M  N  + +  TY   I GLCK+G +  A+ LF  + 
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E ++  Y +LI G C  G L+ A  L   +    LVPN  T+S++I  LC   +++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A+     + +  V  N + +  LI G  +  +     EL+ KM     +PDA   S ++
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394

Query: 457 DLLAKNE 463
           D L + +
Sbjct: 395 DGLCRQK 401


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 234/479 (48%), Gaps = 29/479 (6%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V     VL  ++KS   PD +T+ S++ G C+  +  EA     K+R  G EPDV TY +
Sbjct: 132 VDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNS 191

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++ LC+      A  +F+ M           +P+  TY T++ G   +G + +   LL 
Sbjct: 192 LMDYLCKNGRCTEARKIFDSMTKRG------LKPDITTYGTLLQGYATKGALVEMHGLLD 245

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M    I PN   ++ ++  +   +   EA  +F +M  QG+ PN VT+  ++D LCK+G
Sbjct: 246 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 305

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTVFSY 242
           ++++A    + MI  G+RPD+  YN+L+   C+  +   A+ELF+ M   G C  T+F  
Sbjct: 306 RVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFN 365

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI----------HNTLFVGLFEIH-QVE 291
           SI I+ +CK   +  +  L+  M+  G+KPD++             +LFV ++ I   + 
Sbjct: 366 SI-IDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMS 424

Query: 292 RAFKLFDEMQRNGVAADT----------WTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
                  E   N    +T           TY   + GLCKN    +A+ +F  L ++  +
Sbjct: 425 NTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 484

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            + R +N +ID L K GR + A +LF +     LVPN  TY +M   +   G +++   L
Sbjct: 485 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 544

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           FL ME+N    +    + ++R  ++  E ++    L  + E +   +AS  S+ +DLL+
Sbjct: 545 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS 603



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 243/539 (45%), Gaps = 107/539 (19%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPDVFTYTTLVNGLCRTSHTIVAL 78
           PD  ++  L+ GLC E+R  EA  L   +   G  C PDV +Y+T++NG  +        
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD----- 103

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
              ++M +          PN VTY +II  LCK   VDKA E+L  M    + P+ +TY 
Sbjct: 104 --LDKMLDQR------ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYN 155

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S++ GFC +    EA     +M   GV+P+VVT+N +MD LCKNG+  EA ++ D M + 
Sbjct: 156 SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 215

Query: 199 GVRPDAFTYNTLLDGFCLTG-----------------------------------RVNHA 223
           G++PD  TY TLL G+   G                                   +V  A
Sbjct: 216 GLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEA 275

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             +F  M   G      +Y  +I+  CK+  +E A+  + +M+ +G++PD +++N+L   
Sbjct: 276 MLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHS 335

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L    + E+A +LF EM   G+   T  + + ID  CK G ++E+ +LF  +  +  + D
Sbjct: 336 LCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395

Query: 344 I-----------RAYNSLID---------------------------------------- 352
           I           R Y+  ++                                        
Sbjct: 396 IITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTY 455

Query: 353 -----GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
                GLCK+   + AL +F++L    L     T++IMI  L   G+ D+A+DLF+    
Sbjct: 456 NIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 515

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV-DLLAKNEIS 465
           N +VPN  T+ ++    I      ++ +L   M++     D+ +++ +V +LL + EI+
Sbjct: 516 NGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEIT 574



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 191/417 (45%), Gaps = 60/417 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+     V L ++      PD VT+ SL+  LC   R  EA  +F  +   G +PD+ TY
Sbjct: 165 GQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTY 224

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG------EFGV-VC------------------- 95
            TL+ G   T   +V ++   ++   NG       F + VC                   
Sbjct: 225 GTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283

Query: 96  ----EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                PN VTY T+ID LCK G V+ A     QM D+ ++P+ + Y S+I   C    W 
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWE 343

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A+ LF+EM+D+G+  + + FN I+D  CK G++ E+ +L DLM++ GV+PD  T    L
Sbjct: 344 KAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT----L 399

Query: 212 DGFCLTGRVNHA-----KELFVSMESMGCKHT--------------------VFSYSILI 246
             F  + R +++       +F +M + G K                      + +Y+I++
Sbjct: 400 GRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIIL 459

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G CKNK  + AL ++  +    +K +    N +   L ++ + + A  LF     NG+ 
Sbjct: 460 HGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 519

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
            + WTYR   + +   G + E  +LF ++    C  D    N ++  L + G +  A
Sbjct: 520 PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 576



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 10/279 (3%)

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG--CKHTVFSYS 243
           ++A  + D +++ G+ PD F+YN LL+G C   R   A EL   M   G  C   V SYS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +ING+ K  +++       +ML + I P+VV +N++   L +   V++A ++   M ++
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           GV  D  TY + + G C +G   EA+     +R    E D+  YNSL+D LCK+GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            ++F S+    L P++ TY  ++ G    G + +   L   M  N + PN   F +L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + +  +  + + +  KM++  + P+A     V+D+L K+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKS 304



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 9/242 (3%)

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIHNTLFVGLFEIHQVERAFKL 296
           VFSY+IL+NG C     + AL L   M   G    PDVV ++T+  G F+   +      
Sbjct: 51  VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL------ 104

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            D+M    ++ +  TY + I  LCK   + +A+E+  T+       D   YNS++ G C 
Sbjct: 105 -DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           SG+ + A+   + +    + P+VVTY+ ++  LC +G+  +AR +F  M +  + P++ T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
           +  L++G+       ++  LL  M    + P+  + SI+V   AK E    ++  F+   
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283

Query: 477 QQ 478
           QQ
Sbjct: 284 QQ 285



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 149/345 (43%), Gaps = 31/345 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V    +V  ++ +    P+AVT+ ++I  LC   R+ +A   F ++   G  PD   Y 
Sbjct: 271 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYN 330

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L++ LC       A  LF EM +       +C  +T+ + +IID  CKEG V ++ +L 
Sbjct: 331 SLIHSLCIFDKWEKAEELFLEMLDRG-----IC-LSTIFFNSIIDSHCKEGRVIESGKLF 384

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWN---EAKRLFIEMMDQGVQ------------- 166
             M    +KP+++T    +      +D++       +F  M + G +             
Sbjct: 385 DLMVRIGVKPDIITLGRFLGS--ARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNT 442

Query: 167 -------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
                  P + T+N+I+  LCKN   D+A R+   +    ++ +A T+N ++D     GR
Sbjct: 443 ASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 502

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
            + AK+LFV+  S G     ++Y ++         +E    L+  M   G   D  + N 
Sbjct: 503 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 562

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           +   L +  ++ RA      +     + +  T   FID L    Y
Sbjct: 563 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 607


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 235/469 (50%), Gaps = 6/469 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +L +   PD+  +TS + G C    +  A  +F  + + GC    FTYT L++GL  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 A+ +F  M   +      C P+T  Y T++ GLC+ G  ++A+ LL +      
Sbjct: 155 AGMVREAMAVFVGMRADS------CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGF 208

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +PN+V Y ++I G+C A +   A ++F  M      PNV T+  ++  LCK+GK++ A  
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L   M++ G+ P+  TY  L+ G C  G +  A  L   ME+ G     +++S+LI+  C
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K +++E A      ++ KG+K + V++ +L  GL +  +++ A +L  +M   G   D  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           +Y + IDGLC+   + +A  +   +     +     Y  +ID L +    E   ++F  +
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               + P++VTY++ +   C +G+M+ A  + + M +  V PN++T++ LIRG+  +   
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           S+       M      P+    ++++ L+ K   S NS+  + + + ++
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKD 557



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 229/496 (46%), Gaps = 42/496 (8%)

Query: 15  LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHT 74
           L+ C    A T+T+L+ GL     + EA A+F  +R   C PD   Y T+V+GLC    T
Sbjct: 135 LRGCLR-TAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 75  ------------------IVALNLFEEMANGNGEF-----------GVVCEPNTVTYTTI 105
                             IV  N   +     GE            G  C PN  TYT +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I GLCK G V++A  L  +M +  ++PNVVTYT++I+G C       A RL   M   G+
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN  TF+V++D LCK  K++EA   L  +++ GV+ +   Y +L+DG C TG+++ A E
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M S G      SYS LI+G C+ K++  A  +  +M+ KGI+   V +  +   L 
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                E   K+FD+M   G+  D  TY  F+   C+ G + +A  +   +       ++ 
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF--L 403
            YN+LI G    G +  A   F  +      PN  +Y++++  +      D + D++   
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIA 553

Query: 404 DMEENAVVPNVIT----------FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           DM++  V+   IT          +   IR   R++   +       M+  N+ P   + +
Sbjct: 554 DMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613

Query: 454 IVVDLLAKNEISLNSL 469
            ++D   + +I  ++L
Sbjct: 614 SIIDCCCRLKILTDAL 629



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 232/505 (45%), Gaps = 42/505 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + H   V   +  +  +P+  T+T LI GLC   ++  A  LF+++   G EP+V TY
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANG----NGEFGVVCEP------------------- 97
           T L+ G C   H   A  L   M  NG    +  F V+ +                    
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345

Query: 98  -----NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                N V YT++IDGLCK G +D A EL+ +M  +   P+  +Y+S+I G C  K  ++
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  +  +MM++G+Q + VT+ +I+DEL +    +   ++ D MI  G+ PD  TY   + 
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
            +C  GR+  A+ + V M   G    + +Y+ LI GY     +  A S +  M+ KG KP
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525

Query: 273 DVVIHNTLF------------VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           +   +  L             V +++I  ++    L +++    +      Y  FI  LC
Sbjct: 526 NEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLC 585

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           +   + EA   F  ++          Y S+ID  C+   L  AL L  S+     +P++ 
Sbjct: 586 RVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLE 645

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +Y I+I  LC  G    A+++F D+       + I + +LI G ++    ++   LL  M
Sbjct: 646 SYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVM 705

Query: 441 KEINVMPDASIVSIVV-DLLAKNEI 464
           KE    P  +I +++  ++   NE+
Sbjct: 706 KEHGYQPSNTINAMITGEITVTNEV 730



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 197/397 (49%), Gaps = 6/397 (1%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TYTTL+N  C       A      + +          P++  YT+ + G C+ G +  A 
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAG------LAPDSYAYTSFVLGYCRAGMLTHAC 127

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            + + M  +       TYT+++ G   A    EA  +F+ M      P+   +  ++  L
Sbjct: 128 RVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGL 187

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+ G+ +EA  LL+  + +G  P+   YN L+DG+C  G + HA ++F  M+   C   V
Sbjct: 188 CEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNV 247

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+G CK+ ++E A+ L+S M+  G++P+VV +  L  G      ++ AF+L   
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL 307

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+ NG+  + WT+   ID LCK   + EA     +L     + +   Y SLIDGLCK+G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ A EL + +     VP+  +YS +I GLC   ++ +A  +  DM E  +  + +T+ +
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +I   +R        ++  KM    + PD    ++ V
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFV 464



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 172/360 (47%), Gaps = 4/360 (1%)

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           T++  L +       + L  +M  +N++    TYT++I  +C A D   AK+    ++  
Sbjct: 46  TLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQHLTSLLHA 101

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G+ P+   +   +   C+ G +  A R+  LM   G    AFTY  LL G    G V  A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             +FV M +  C      Y+ +++G C+    E A  L  E +S G +P++V++N L  G
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                ++E A K+F+ M  N  + +  TY   I GLCK+G +  A+ LF  +     E +
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  Y +LI G C  G L+ A  L   +    LVPN  T+S++I  LC   ++++A+    
Sbjct: 282 VVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLG 341

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            + +  V  N + +  LI G  +  +     EL+ KM     +PDA   S ++D L + +
Sbjct: 342 SLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQK 401



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 6/165 (3%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           ++  I+ LC   R+ EA   F  ++     P    YT++++  CR      AL L + M 
Sbjct: 577 YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMT 636

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
             +G       P+  +Y  II  LC+ G    AKE+   +  K    + + +  +I G  
Sbjct: 637 K-SGYL-----PHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLL 690

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
                 E   L   M + G QP+     +I  E+    ++ E +R
Sbjct: 691 QKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEVQEIAR 735


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 226/439 (51%), Gaps = 6/439 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +  +++     P+A+T+  L+ GLC   R+ E +AL  ++      PD FTY
Sbjct: 112 GDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 171

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L +GL R   +   L+LF +        G        T + +++GLCK+G V  A+E+
Sbjct: 172 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIG------DYTCSILLNGLCKDGKVSIAEEV 225

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  + +  + P  V Y ++I G+C   +   A   F +M  + ++P+ +T+N +++ LCK
Sbjct: 226 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 285

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++  A  LL  M  +GV P   T+NTL+D +  TG++     +   M+  G K  V S
Sbjct: 286 AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 345

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  ++N +CKN +I  A+++  +M  K + P+  ++N +     E    ++AF L ++M+
Sbjct: 346 YGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 405

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG++    TY   I GLC    I EA E+ ++L   +   D  +YN+LI   C  G ++
Sbjct: 406 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 465

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL+L + +    +   V TY  +I GL   G++++   L+  M +N VVP+    ++++
Sbjct: 466 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 525

Query: 422 RGFIRINEPSKVIELLHKM 440
             + +     K  +L  +M
Sbjct: 526 EAYSKYGNEIKAEDLRKEM 544



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 231/502 (46%), Gaps = 49/502 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+A ++  +I G+    R  +A  +F ++      P+  TY T+++G  +         L
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 81  FEEMANGNGEFGVVC---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
            ++M         VC   +PN +TY  ++ GLC+ G + +   LL +M  + + P+  TY
Sbjct: 121 RDQM---------VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 171

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           + +  G     D      LF + +  GV     T +++++ LCK+GK+  A  +L  ++ 
Sbjct: 172 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 231

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+ P    YNTL++G+C TG +  A   F  M+S   K    +Y+ LING CK + I  
Sbjct: 232 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 291

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L  EM   G+ P V   NTL        Q+E+ F +  EMQ NG+  +  +Y + ++
Sbjct: 292 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 351

Query: 318 GLCKNGYIVEAV----ELFH-----TLRILKCEFD------------------------- 343
             CKNG I EAV    ++FH       ++     D                         
Sbjct: 352 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 411

Query: 344 -IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
            I  YN LI GLC   ++  A E+  SL    L+P+ V+Y+ +I   C  G +DKA DL 
Sbjct: 412 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 471

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK- 461
             M +  +   V T+  LI G       +++  L  KM + NV+P  +I +I+V+  +K 
Sbjct: 472 QRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKY 531

Query: 462 -NEISLNSLPSFTVHEQQEEVD 482
            NEI    L    + ++    D
Sbjct: 532 GNEIKAEDLRKEMLQKRNNHDD 553



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 214/452 (47%), Gaps = 40/452 (8%)

Query: 33  LCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFG 92
           L +  R  +    F  L   G  PD F +   V           A+ +   M    G  G
Sbjct: 2   LLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRM----GRDG 57

Query: 93  VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN  +Y  +I G+ + G    A E+  +M ++ + PN +TY ++I G     D   
Sbjct: 58  AP-PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEA 116

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
             RL  +M+  G++PN +T+NV++  LC+ G+M E S LLD M    + PD FTY+ L D
Sbjct: 117 GFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFD 176

Query: 213 -----------------------------------GFCLTGRVNHAKELFVSMESMGCKH 237
                                              G C  G+V+ A+E+  S+ + G   
Sbjct: 177 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 236

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           T   Y+ LINGYC+  E+EGA S + +M S+ IKPD + +N L  GL +  ++  A  L 
Sbjct: 237 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 296

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            EMQ NGV     T+ T ID   + G + +   +   ++    + ++ +Y S+++  CK+
Sbjct: 297 MEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN 356

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           G++  A+ +   +    ++PN   Y+ +I      G  D+A  L   M+ N + P+++T+
Sbjct: 357 GKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTY 416

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           ++LI+G    ++ S+  E+++ +    ++PDA
Sbjct: 417 NLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 448



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 186/372 (50%), Gaps = 5/372 (1%)

Query: 91  FGVVC----EPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRGFC 145
           FG++      P+T  +   +      G + +A  +L +M +D    PN  +Y  VI G  
Sbjct: 15  FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 74

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            A    +A  +F EM ++ V PN +T+N ++D   K G ++   RL D M+ HG++P+A 
Sbjct: 75  RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 134

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN LL G C  GR+     L   M S       F+YSIL +G  +N + +  LSL+ + 
Sbjct: 135 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 194

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L  G+       + L  GL +  +V  A ++   +   G+      Y T I+G C+ G +
Sbjct: 195 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 254

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A   F  ++    + D   YN+LI+GLCK+ R+  A +L   +    + P V T++ +
Sbjct: 255 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 314

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I      GQ++K   +  +M+EN + PNV+++  ++  F +  +  + + +L  M   +V
Sbjct: 315 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 374

Query: 446 MPDASIVSIVVD 457
           +P+A + + ++D
Sbjct: 375 LPNAQVYNAIID 386



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 41/231 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAA----------------- 44
           G++   F+VL  + ++   P+ V++ S++   C   +I EA A                 
Sbjct: 322 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 381

Query: 45  ------------------LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
                             L  K++  G  P + TY  L+ GLC  S    A  +   ++N
Sbjct: 382 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 441

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                     P+ V+Y T+I   C  G +DKA +L  +M    IK  V TY  +I G   
Sbjct: 442 HR------LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 495

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           A   NE + L+ +MM   V P+    N++++   K G   +A  L   M+Q
Sbjct: 496 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 4/184 (2%)

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYN 348
           V RAF +   +   G   DT+ +   +      G + EAV +   + R      +  +YN
Sbjct: 11  VRRAFGI---LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYN 67

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            +I G+ ++GR   A+E+F  +    ++PN +TY+ MI G    G ++    L   M  +
Sbjct: 68  VVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCH 127

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
            + PN IT+++L+ G  R     +   LL +M    ++PD    SI+ D L++N  S   
Sbjct: 128 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 187

Query: 469 LPSF 472
           L  F
Sbjct: 188 LSLF 191


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 215/385 (55%)

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           NL + +A+ N       +P  + +  ++  + +    +    L  +M+ + IK NV T +
Sbjct: 20  NLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLS 79

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I  FC+    +    +F + + +G +P+VV F  ++D +C+ GK + A+ LL  M   
Sbjct: 80  ILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLV 139

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  PD  T N+L+ G+C  G+++  +++F  M S G K  V+SYSI INGYCK ++I+ A
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           + L+ EM  +G+ P+ V +NTL   L +  +   A  LF +M   G++ D   Y T +DG
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDG 259

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G + E + LF  ++    + D+  Y  +I+G+C+S +++ A E+   L    L P+
Sbjct: 260 FCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPD 319

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           V TY+ ++ GLC +G + +A  LF  MEE+  +P   ++++L++G ++ N+ S V++L+H
Sbjct: 320 VHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIH 379

Query: 439 KMKEINVMPDASIVSIVVDLLAKNE 463
           +M +     DA   + + D L  N+
Sbjct: 380 EMADRGFYADAVTRTFLKDFLPGND 404



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 182/353 (51%), Gaps = 8/353 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +        R+L     P  + F  L+  +    +     +LF ++   G + +V T 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 62  TTLVNGLCRTSHTIVALNLF-EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           + L+N  C   H     ++F + +  G        +P+ V +TT+IDG+C+ G  + A  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGF-------KPDVVIFTTLIDGVCRIGKTELAAG 131

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M      P+VVT  S++RG+C     ++ +++F  M+ +G++P+V ++++ ++  C
Sbjct: 132 LLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYC 191

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  K+DEA  L D M   GV P+A TYNTL+   C   R   A+ LF  M + G    + 
Sbjct: 192 KVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDIL 251

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +YS L++G+CK   ++  L L+ EM  + +KPD+V++  +  G+    +V+ A ++   +
Sbjct: 252 AYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRL 311

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
              G+  D  TY   +DGLC+ G I+EA+ LF  +    C     +YN L+ G
Sbjct: 312 IVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQG 364



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 167/314 (53%), Gaps = 6/314 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           +  T + LI   C    +    ++F K    G +PDV  +TTL++G+CR   T +A  L 
Sbjct: 74  NVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLL 133

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM        V C P+ VT  +++ G C +G +DK +++   M  K +KP+V +Y+  I
Sbjct: 134 KEMGL------VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFI 187

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C  +  +EA  LF EM  +GV PN VT+N ++  LC+  +  +A  L   M   G+ 
Sbjct: 188 NGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLS 247

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD   Y+TLLDGFC  G ++    LF  M+    K  +  Y+I+ING C++++++ A  +
Sbjct: 248 PDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEV 307

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
            S ++ +G+KPDV  +  L  GL     +  A +LF +M+ +G    + +Y   + G  +
Sbjct: 308 LSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQ 367

Query: 322 NGYIVEAVELFHTL 335
           +      V+L H +
Sbjct: 368 HNDTSTVVQLIHEM 381



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 7/313 (2%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           V +GF V G+ LK  F PD V FT+LI G+C   +   AA L  ++ + GC PDV T  +
Sbjct: 91  VDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNS 150

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+ G C          +F  M +         +P+  +Y+  I+G CK   +D+A EL  
Sbjct: 151 LMRGYCSQGKIDKVRKIFHLMVSKG------LKPDVYSYSIFINGYCKVEKIDEAMELFD 204

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M  + + PN VTY ++I+  C A    +A+ LF +M   G+ P+++ ++ ++D  CK G
Sbjct: 205 EMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQG 264

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +DE   L   M +  V+PD   Y  +++G C + +V  AKE+   +   G K  V +Y+
Sbjct: 265 NLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYT 324

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            L++G C+   I  AL L+ +M   G  P    +N L  G  + +      +L  EM   
Sbjct: 325 ALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADR 384

Query: 304 GVAADTWTYRTFI 316
           G  AD  T RTF+
Sbjct: 385 GFYADAVT-RTFL 396



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 162/332 (48%)

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
           Y  + ++A   F  M+D+  QP ++ FN ++  + +  K +    L   M   G++ +  
Sbjct: 17  YFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVC 76

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T + L++ FC    V++   +F      G K  V  ++ LI+G C+  + E A  L  EM
Sbjct: 77  TLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM 136

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
              G  PDVV  N+L  G     ++++  K+F  M   G+  D ++Y  FI+G CK   I
Sbjct: 137 GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKI 196

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA+ELF  +       +   YN+LI  LC++ R   A  LFR +    L P+++ YS +
Sbjct: 197 DEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTL 256

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + G C  G +D+   LF +M+   V P+++ + ++I G  R  +     E+L ++    +
Sbjct: 257 LDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGL 316

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
            PD    + +VD L +    + +L  F   E+
Sbjct: 317 KPDVHTYTALVDGLCREGSIIEALRLFRKMEE 348



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 7/156 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    V+   + +    PD V +T +I G+C   ++ +A  + ++L V G +PDV TY
Sbjct: 264 GNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTY 323

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T LV+GLCR    I AL LF +M          C P + +Y  ++ G  +        +L
Sbjct: 324 TALVDGLCREGSIIEALRLFRKMEEDG------CMPGSCSYNVLLQGCLQHNDTSTVVQL 377

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           + +M D+    + VT T  ++ F    D    K+L 
Sbjct: 378 IHEMADRGFYADAVTRT-FLKDFLPGNDSPAIKQLL 412


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 196/400 (49%), Gaps = 6/400 (1%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           ++ TYTTL+N  C       A      +            P++  YT+ + G C+ G   
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAG------LAPDSHAYTSFVLGYCRTGLFA 126

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
            A  L L M  +       TY ++++G C A    EA  +F  M   G  P+   +++++
Sbjct: 127 HACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMV 186

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             LC  G+  EA  LL   +  G  P+   YN L+DG+C TG +  A ++F  M+S GC 
Sbjct: 187 HGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCL 246

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +Y+ LI G+CK+ ++E A+ LYS M+  G+ P+VV + TL  G      +E AF+L
Sbjct: 247 PNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRL 306

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
              M+  G+A + WT    ID LCK+G I EA +   +L     + +   Y S+ID LCK
Sbjct: 307 LHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCK 366

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           SG+ + A  L + +     VP+   YS +I GLC + ++ +A  L  DM E+ V  N + 
Sbjct: 367 SGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVP 426

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           F +LI   +R         +  +M    V PD    ++ +
Sbjct: 427 FTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFI 466



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 170/360 (47%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  TYTT+I+  C  G +  AK  L  +    + P+   YTS + G+C    +  A RLF
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
           + M  +G      T+  ++  LC  G + EA  +   M   G  PD+  Y+ ++ G C  
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           GR   A  L       G    V  Y+ LI+GYC   ++E A+ ++  M SKG  P+V  +
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
             L  G  +  +VERA  L+  M   G+A +  TY T I G C  G++  A  L H++  
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA 312

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                +      LID LCK GR+E A +   SL    +  N V Y+ MI  LC  G+ D 
Sbjct: 313 CGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDG 372

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A +L   +     VP+   +  LI G  R N+  + I LL+ M E  V  +A   +I++D
Sbjct: 373 AHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID 432



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 189/386 (48%), Gaps = 6/386 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     V   +      PD+  ++ ++ GLC   R  EA AL T     G  P+V  Y
Sbjct: 158 GMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVY 217

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C T    +A+++F+ M +        C PN  TYT +I G CK G V++A  L
Sbjct: 218 NALIDGYCSTGDLELAIDIFKGMQSKG------CLPNVRTYTQLICGFCKSGKVERAMVL 271

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +  + PNVVTYT++I+G C       A RL   M   G+ PN  T  V++D LCK
Sbjct: 272 YSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCK 331

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+++EA + L  ++Q G++ +   Y +++D  C +G+ + A  L   + + G       
Sbjct: 332 HGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHM 391

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI+G C+  ++  A+SL ++M+  G++ + V    L        + +    + D M 
Sbjct: 392 YSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMA 451

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             GV  D  TY  FI   C++G + +A  +   +       ++  YN+LI G    G + 
Sbjct: 452 AAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVS 511

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIG 387
            A    +++      PN  +Y++++G
Sbjct: 512 QAFSSLKNMIDNGCKPNDESYTVLLG 537



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 224/538 (41%), Gaps = 92/538 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +L   +   F P+   + +LI G C+   +  A  +F  ++  GC P+V TY
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ G C++     A+ L+  M     E G+   PN VTYTT+I G C EG ++ A  L
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMI----EAGLA--PNVVTYTTLIQGQCSEGHLEHAFRL 306

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+   + PN  T   +I   C      EA++    ++ +G++ N V +  ++D LCK
Sbjct: 307 LHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCK 366

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG----------------------- 218
           +GK D A  L+  +I  G  PDA  Y++L+DG C                          
Sbjct: 367 SGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVP 426

Query: 219 ------------RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
                       R +  K +   M + G K  V +Y++ I  YC++  +E A S+  +M+
Sbjct: 427 FTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMI 486

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC-KNGY- 324
             G++P++  +NTL  G   +  V +AF     M  NG   +  +Y   +  L  KN Y 
Sbjct: 487 DHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYH 546

Query: 325 --IVEAVELFHTLRI------------LKCEFDIRAYNSLIDGLCKSGRLE--------- 361
             + +++ L+  + +            L+C      Y+  I  L K  RLE         
Sbjct: 547 DLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGM 606

Query: 362 --------------------------IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
                                      AL    S+     +P + +Y  +I  LC +G  
Sbjct: 607 QSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSF 666

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
             A+ +F D+       + I + +LI G ++    +    LL  M+E N  P ++I S
Sbjct: 667 HTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYS 724



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 166/365 (45%), Gaps = 4/365 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P      T++  L + G +   + L  +M  +N+     TYT++I  +C+A D   AKR 
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKRH 96

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              ++  G+ P+   +   +   C+ G    A RL  LM Q G     FTY  LL G C 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            G V  A  +F  M   GC      YSI+++G C       A++L ++ + KG  P+V +
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L  G      +E A  +F  MQ  G   +  TY   I G CK+G +  A+ L+  + 
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 ++  Y +LI G C  G LE A  L  S+    L PN  T  ++I  LC  G+++
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +A+     + +  +  N + +  +I    +  +      L+ K+     +PDA + S ++
Sbjct: 337 EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLI 396

Query: 457 DLLAK 461
           D L +
Sbjct: 397 DGLCR 401



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 147/295 (49%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N+ T+  +++  C  G +  A R L  +++ G+ PD+  Y + + G+C TG   HA  LF
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
           + M   GC  T F+Y+ L+ G C    +  A+++++ M   G  PD  +++ +  GL   
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            +   A  L  +    G   +   Y   IDG C  G +  A+++F  ++   C  ++R Y
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
             LI G CKSG++E A+ L+  +    L PNVVTY+ +I G C++G ++ A  L   ME 
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA 312

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             + PN  T  +LI    +     +  + L  + +  +  +  I + ++D L K+
Sbjct: 313 CGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKS 367



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 173/403 (42%), Gaps = 24/403 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+      LG +++     + V +TS+I  LC   +   A  L  K+   G  PD   Y
Sbjct: 333 GRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMY 392

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++GLCR +  + A++L  +M     E GV  + N V +T +ID   +E   D  K +
Sbjct: 393 SSLIDGLCRENKLLEAISLLNDMI----ESGV--QANAVPFTILIDKHLREFRSDSPKMI 446

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M    +KP+VVTYT  IR +C      +A+ + I+M+D GV+PN+ T+N ++     
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYAN 506

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH-----------------AK 224
            G + +A   L  MI +G +P+  +Y  LL G  L     H                  +
Sbjct: 507 LGLVSQAFSSLKNMIDNGCKPNDESYTVLL-GLLLKKNSYHDLVADSISLWKIVDMKVLE 565

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           EL   +  + C    + Y   I    K   +E A S    M S  + P   ++  +    
Sbjct: 566 ELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECC 625

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
           + +  ++ A +  D M +        +YR  I  LC+ G    A  +F  +   +   D 
Sbjct: 626 YRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDE 685

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
            A+  LIDGL + G       L   +      P    YS + G
Sbjct: 686 IAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTG 728



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 6/178 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  ++K   +  +  +   I+ L    R+ EA +    ++     P    YT ++    
Sbjct: 567 LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCY 626

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R      AL   + M   N        P   +Y  II  LC+EG    AK +   +  K 
Sbjct: 627 RMKLLKEALRFLDSMVKRNYL------PRLESYRFIICALCEEGSFHTAKSIFGDILSKE 680

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
              + + +  +I G     +  +  RL   M +Q  +P    ++ +  E+    +  E
Sbjct: 681 YNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVTSEAQE 738


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 211/389 (54%), Gaps = 9/389 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           EA  +F +L      P +     +++GL +   +  A  LF+EM       G+V  P+ V
Sbjct: 129 EALYVFRRLWTL---PALPACNAVLDGLVKARRSRCAWELFDEML----RRGMV--PSVV 179

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY T+I+    +G V KA+E+  QM  + I PNV+TYTS+I   C      +A+RLF  M
Sbjct: 180 TYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAM 239

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            + G++PN  T+NV+M   C+   ++ A  L   ++  G+ P+A  + TL+DGFC   R 
Sbjct: 240 KEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRF 299

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + AK++F  M   G   TV  Y+ L++G  ++ + + ALSLY EM   G+ PD    + +
Sbjct: 300 SEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIV 359

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +  Q++ A +  + ++ +GV  +   Y   ID  C+NG + EA+     +  +  
Sbjct: 360 VRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGV 419

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           E ++ +Y+SLIDG  K G+++IA+ ++  +    + PNVVTY+ +I G   +G +D A  
Sbjct: 420 EPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFR 479

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINE 429
              +M EN + PN IT  +L+ G  R N 
Sbjct: 480 FHKEMIENGISPNAITVSVLVDGLCRENR 508



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 224/446 (50%), Gaps = 24/446 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+    +  +++     P+ +T+TS+I  LC E  I +A  LF  ++  G  P+ +TY
Sbjct: 192 GAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTY 251

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C+      A  L++E+ N     G++  PN V +TT+IDG CK     +AK++
Sbjct: 252 NVLMSGHCQGDDVNSAFVLYQELLNS----GLI--PNAVVFTTLIDGFCKAKRFSEAKDM 305

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M    + P V  Y S++ G   + D  EA  L+ EM   G+ P+  T ++++  LC 
Sbjct: 306 FRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCD 365

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++  A+R L+ + + GV  +A  YN L+D +C  G +  A      M  +G +  V S
Sbjct: 366 GGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVS 425

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI+G+ K  +++ A+++Y+EM++KGI+P+VV +  L  G  +   ++ AF+   EM 
Sbjct: 426 YSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMI 485

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG++ +  T    +DGLC+   + +AV        +K   DI ++ S      +     
Sbjct: 486 ENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYS-DIHSFFSNFTTEEEP---- 540

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
                        L+PN   Y  +I GL  DGQ  +A  LF  M ++ ++ +  T+ +LI
Sbjct: 541 -------------LIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLI 587

Query: 422 RGFIRINEPSKVIELLHKMKEINVMP 447
           RG   +      + L   M +I V P
Sbjct: 588 RGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 184/365 (50%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P       ++DGL K      A EL  +M  + + P+VVTY ++I    Y     +A+ +
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           + +M+ + + PNV+T+  ++  LC+ G + +A RL D M + G+RP+ +TYN L+ G C 
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
              VN A  L+  + + G       ++ LI+G+CK K    A  ++ +M   G+ P V +
Sbjct: 261 GDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPV 320

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N+L  G F     + A  L+ EM R G+  D +T    + GLC  G I  A      +R
Sbjct: 321 YNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVR 380

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
                 +  AYN+LID  C++G LE AL     +    + PNVV+YS +I G    G+M 
Sbjct: 381 EDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQ 440

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            A  ++ +M    + PNV+T+  LI G  +            +M E  + P+A  VS++V
Sbjct: 441 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLV 500

Query: 457 DLLAK 461
           D L +
Sbjct: 501 DGLCR 505



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 133/296 (44%), Gaps = 11/296 (3%)

Query: 171 TFNVIMDELCKNGKMDEA----SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
              V++  L + G +DEA     RL  L       P     N +LDG     R   A EL
Sbjct: 113 ALGVLVIALSQMGLLDEALYVFRRLWTL-------PALPACNAVLDGLVKARRSRCAWEL 165

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           F  M   G   +V +Y+ LIN       +  A  ++ +M+++ I P+V+ + ++   L E
Sbjct: 166 FDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCE 225

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              +  A +LFD M+  G+  + +TY   + G C+   +  A  L+  L       +   
Sbjct: 226 EGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVV 285

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           + +LIDG CK+ R   A ++FR +P   + P V  Y+ ++ G    G   +A  L+ +M 
Sbjct: 286 FTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMT 345

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
              + P+  T  +++RG     +       L  ++E  V  +A+  + ++D   +N
Sbjct: 346 RLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRN 401



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 13/190 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +   ++     P+ VT+T+LI G      I  A     ++   G  P+  T
Sbjct: 436 LGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAIT 495

Query: 61  YTTLVNGLCRTSHTIVALNL--------FEEMANGNGEFGVVCE---PNTVTYTTIIDGL 109
            + LV+GLCR +    A+          + ++ +    F    E   PN+  Y T+I GL
Sbjct: 496 VSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGL 555

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
             +G   +A +L   M+   +  +  TYT +IRG C       A  L+ +MM  GV+P  
Sbjct: 556 YLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP-- 613

Query: 170 VTFNVIMDEL 179
           + + +I  E+
Sbjct: 614 MRYKIICPEI 623


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 208/404 (51%), Gaps = 8/404 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ ++F  +IK LC    + +A  +F  +    C  D +TY+TL++GLC       A++L
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL 232

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM    G F     PN V +  +I  LCK+G + +A +L+  M  K   PN VTY S+
Sbjct: 233 LDEM-QVEGTF-----PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSL 286

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G C     ++A  L   M+     PN +TF  ++D   K+G+  +  R+L  + + G 
Sbjct: 287 VHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGY 346

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           R + F+Y++L+ G    G+  H  +L+  M   GCK     YS LI+G C+  + + A  
Sbjct: 347 RGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE 406

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
              EM +KG  P+   +++L  G FE   + +A  ++ EM  N        Y   I+GLC
Sbjct: 407 YLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC 466

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC--GVLVPN 378
           KNG + EA+ ++  +     + D+ AY+S+I G C +  +E  ++LF  + C    L P+
Sbjct: 467 KNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPD 526

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           VVTY+I++   C    + +A D+   M +    P+ IT D+ ++
Sbjct: 527 VVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLK 570



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 218/410 (53%), Gaps = 8/410 (1%)

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           +P+  ++  ++  LCR  +   A+ +F  M++ N      C  +  TY+T++ GLC EG 
Sbjct: 172 QPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRN------CVADGYTYSTLMHGLCNEGR 225

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
           +D+A  LL +M+ +   PN V +  +I   C   D + A +L   M  +G  PN VT+N 
Sbjct: 226 IDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNS 285

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           ++  LC  GK+D+A  LL+ M+ +   P+  T+ TL+DGF   GR      + VS+E  G
Sbjct: 286 LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 345

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
            +   FSYS LI+G  K  + E  + L+ EM+ KG KP+ ++++ L  GL    + + A 
Sbjct: 346 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAK 405

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +   EM+  G   +++TY + + G  + G I +A+ ++  +    C      Y+ LI+GL
Sbjct: 406 EYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGL 465

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM--EENAVVP 412
           CK+G+L+ AL +++ +    +  +VV YS MI G CN   +++   LF  M      + P
Sbjct: 466 CKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQP 525

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +V+T+++L+  F   N  S+ I++L+ M +    PD     I +  L  N
Sbjct: 526 DVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDN 575



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 178/344 (51%), Gaps = 8/344 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  +      P+ V F  LI  LC +  +  A+ L   + + GC P+  TY
Sbjct: 224 GRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTY 283

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +LV+GLC       A++L   M          C PN +T+ T++DG  K G       +
Sbjct: 284 NSLVHGLCLKGKLDKAMSLLNRMVANK------CVPNDITFGTLVDGFVKHGRALDGVRV 337

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L+ +++K  + N  +Y+S+I G           +L+ EM+++G +PN + ++ ++D LC+
Sbjct: 338 LVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCR 397

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK DEA   L  M   G  P++FTY++L+ G+   G ++ A  ++  M    C H    
Sbjct: 398 EGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVC 457

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM- 300
           YSILING CKN +++ AL ++ +MLS+GIK DVV ++++  G      VE+  KLF++M 
Sbjct: 458 YSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 517

Query: 301 -QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                +  D  TY   ++  C    +  A+++ +T+    C+ D
Sbjct: 518 CHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPD 561



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 195/410 (47%), Gaps = 15/410 (3%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF---TYTTLVNGLCRTSHTIVALNL 80
           ++F SLI+     S  ++  +L   L    CE  VF   ++  +     +      AL+L
Sbjct: 66  LSFYSLIENF---SNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDL 122

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN----IKPNVVT 136
           F  M     EF   C+    ++ T+++ + +EG  D A E    + D N    I+PN ++
Sbjct: 123 FHRMG---AEFH--CKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLS 177

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           +  VI+  C   + ++A  +F  M D+    +  T++ +M  LC  G++DEA  LLD M 
Sbjct: 178 FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQ 237

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
             G  P+   +N L+   C  G ++ A +L  +M   GC     +Y+ L++G C   +++
Sbjct: 238 VEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLD 297

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A+SL + M++    P+ +   TL  G  +  +     ++   ++  G   + ++Y + I
Sbjct: 298 KAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLI 357

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            GL K G     ++L+  +    C+ +   Y++LIDGLC+ G+ + A E    +      
Sbjct: 358 SGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHT 417

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           PN  TYS ++ G    G + KA  ++ +M +N    + + + +LI G  +
Sbjct: 418 PNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCK 467



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 22/260 (8%)

Query: 227 FVSMES----MGCKHTVF---SYSILINGYCKNKEIEGALSLYSEM-----LSKGIKP-- 272
           F S+E     M C++ VF   S+ I+   Y K    + AL L+  M       + +K   
Sbjct: 81  FTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFN 140

Query: 273 ---DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
              +VVI    F    E +        F  +Q NG+     ++   I  LC+ G + +AV
Sbjct: 141 TVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGL-----SFNLVIKALCRVGNVDQAV 195

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           E+F  +    C  D   Y++L+ GLC  GR++ A+ L   +      PN V ++++I  L
Sbjct: 196 EVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISAL 255

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C  G + +A  L  +M     VPN +T++ L+ G     +  K + LL++M     +P+ 
Sbjct: 256 CKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPND 315

Query: 450 SIVSIVVDLLAKNEISLNSL 469
                +VD   K+  +L+ +
Sbjct: 316 ITFGTLVDGFVKHGRALDGV 335


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 226/439 (51%), Gaps = 6/439 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +  +++     P+A+T+  L+ GLC   R+ E +AL  ++      PD FTY
Sbjct: 249 GDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 308

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L +GL R   +   L+LF +        G        T + +++GLCK+G V  A+E+
Sbjct: 309 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIG------DYTCSILLNGLCKDGKVSIAEEV 362

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  + +  + P  V Y ++I G+C   +   A   F +M  + ++P+ +T+N +++ LCK
Sbjct: 363 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 422

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             ++  A  LL  M  +GV P   T+NTL+D +  TG++     +   M+  G K  V S
Sbjct: 423 AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 482

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  ++N +CKN +I  A+++  +M  K + P+  ++N +     E    ++AF L ++M+
Sbjct: 483 YGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 542

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG++    TY   I GLC    I EA E+ ++L   +   D  +YN+LI   C  G ++
Sbjct: 543 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 602

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL+L + +    +   V TY  +I GL   G++++   L+  M +N VVP+    ++++
Sbjct: 603 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 662

Query: 422 RGFIRINEPSKVIELLHKM 440
             + +     K  +L  +M
Sbjct: 663 EAYSKYGNEIKAEDLRKEM 681



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 210/439 (47%), Gaps = 40/439 (9%)

Query: 46  FTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
           F  L   G  PD F +   V           A+ +   M    G  G    PN  +Y  +
Sbjct: 152 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRM----GRDGAP-PPNAFSYNVV 206

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I G+ + G    A E+  +M ++ + PN +TY ++I G     D     RL  +M+  G+
Sbjct: 207 IAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGL 266

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD------------- 212
           +PN +T+NV++  LC+ G+M E S LLD M    + PD FTY+ L D             
Sbjct: 267 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 326

Query: 213 ----------------------GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
                                 G C  G+V+ A+E+  S+ + G   T   Y+ LINGYC
Sbjct: 327 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 386

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           +  E+EGA S + +M S+ IKPD + +N L  GL +  ++  A  L  EMQ NGV     
Sbjct: 387 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 446

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           T+ T ID   + G + +   +   ++    + ++ +Y S+++  CK+G++  A+ +   +
Sbjct: 447 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 506

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               ++PN   Y+ +I      G  D+A  L   M+ N + P+++T+++LI+G    ++ 
Sbjct: 507 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 566

Query: 431 SKVIELLHKMKEINVMPDA 449
           S+  E+++ +    ++PDA
Sbjct: 567 SEAEEIINSLSNHRLIPDA 585



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 223/474 (47%), Gaps = 16/474 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      V   + +    P+ +T+ ++I G      +     L  ++   G +P+  TY
Sbjct: 214 GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITY 273

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++GLCR         L +EMA+          P+  TY+ + DGL + G      + 
Sbjct: 274 NVLLSGLCRAGRMGETSALLDEMASQK------MVPDGFTYSILFDGLSRNG----DSKA 323

Query: 122 LLQMKDKNIKPNVV----TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
           +L +  K +K  V     T + ++ G C     + A+ +   +++ G+ P  V +N +++
Sbjct: 324 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 383

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
             C+ G+++ A      M    ++PD  TYN L++G C   R+ +A++L + M+  G   
Sbjct: 384 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 443

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
           TV +++ LI+ Y +  ++E    + SEM   G+KP+VV + ++     +  ++  A  + 
Sbjct: 444 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 503

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           D+M    V  +   Y   ID   ++G   +A  L   ++       I  YN LI GLC  
Sbjct: 504 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 563

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
            ++  A E+  SL    L+P+ V+Y+ +I   C  G +DKA DL   M +  +   V T+
Sbjct: 564 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 623

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK--NEISLNSL 469
             LI G       +++  L  KM + NV+P  +I +I+V+  +K  NEI    L
Sbjct: 624 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 677



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 186/372 (50%), Gaps = 5/372 (1%)

Query: 91  FGVVC----EPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRGFC 145
           FG++      P+T  +   +      G + +A  +L +M +D    PN  +Y  VI G  
Sbjct: 152 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 211

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            A    +A  +F EM ++ V PN +T+N ++D   K G ++   RL D M+ HG++P+A 
Sbjct: 212 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 271

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN LL G C  GR+     L   M S       F+YSIL +G  +N + +  LSL+ + 
Sbjct: 272 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 331

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L  G+       + L  GL +  +V  A ++   +   G+      Y T I+G C+ G +
Sbjct: 332 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 391

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A   F  ++    + D   YN+LI+GLCK+ R+  A +L   +    + P V T++ +
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 451

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I      GQ++K   +  +M+EN + PNV+++  ++  F +  +  + + +L  M   +V
Sbjct: 452 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 511

Query: 446 MPDASIVSIVVD 457
           +P+A + + ++D
Sbjct: 512 LPNAQVYNAIID 523



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 41/231 (17%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAA----------------- 44
           G++   F+VL  + ++   P+ V++ S++   C   +I EA A                 
Sbjct: 459 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 518

Query: 45  ------------------LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
                             L  K++  G  P + TY  L+ GLC  S    A    EE+ N
Sbjct: 519 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA----EEIIN 574

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
                 ++  P+ V+Y T+I   C  G +DKA +L  +M    IK  V TY  +I G   
Sbjct: 575 SLSNHRLI--PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 632

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           A   NE + L+ +MM   V P+    N++++   K G   +A  L   M+Q
Sbjct: 633 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 683



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 4/174 (2%)

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYN 348
           V RAF +   +   G   DT+ +   +      G + EAV +   + R      +  +YN
Sbjct: 148 VRRAFGI---LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYN 204

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            +I G+ ++GR   A+E+F  +    ++PN +TY+ MI G    G ++    L   M  +
Sbjct: 205 VVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCH 264

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + PN IT+++L+ G  R     +   LL +M    ++PD    SI+ D L++N
Sbjct: 265 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 318


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 227/488 (46%), Gaps = 42/488 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +    ++   TP  VT+T LIKG  AE    E   L  ++   G  P  + +
Sbjct: 308 GEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEF 367

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++ GL R      A+ LF+ +     + GV   P+  TY  +I  L K   V +A  L
Sbjct: 368 NLVIKGLLRNKQWEDAIALFDLVV----DTGV---PDVFTYGCLIHWLSKHHKVHEAVNL 420

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK+  +KP++VT  S++ G+C     +EA +L+ EM  +G  PN VT+  +M    K
Sbjct: 421 WDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIK 480

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
               D+A  LL+ M Q+GV    +TYN L++G C+  RV    E+     S G   T  +
Sbjct: 481 KKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMT 540

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +ING+ K   +  AL++Y +M  KGI P++V + +   G    +  + A KL   M+
Sbjct: 541 YNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMR 600

Query: 302 RNGVAADTWTYRTFIDGLCKNG-----------------------------------YIV 326
            NG+  D   Y  FI+  CK G                                    + 
Sbjct: 601 CNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMA 660

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA + ++++   +   D   Y +LIDG  K G +  ALEL+  +     +P+  T++ + 
Sbjct: 661 EASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALT 720

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC  G +D A+ L  DM    V PN +T++MLI   IR  +  +  +L  KM    V+
Sbjct: 721 HGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVV 780

Query: 447 PDASIVSI 454
           PD +  +I
Sbjct: 781 PDDTTYNI 788



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 219/453 (48%), Gaps = 8/453 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFTYTTLVNGL 68
           VLG++ ++   P   T+ S++  L    R+ EA  L  + L   G + DVF  TTL+ G 
Sbjct: 245 VLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGY 304

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C       AL+LF+E        GV   P  VTYT +I G   EG  D+  +L  QM ++
Sbjct: 305 CLHGEIGKALDLFDEAVRD----GVT--PTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQ 358

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            + P+   +  VI+G    K W +A  LF  ++D GV P+V T+  ++  L K+ K+ EA
Sbjct: 359 GLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEA 417

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L D M + GV+P   T ++LL G+C  G ++ A +L+  M   G      +Y+ L+ G
Sbjct: 418 VNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKG 477

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           Y K K  + A +L +EM   G+      +N L  GL  + +V    ++       G    
Sbjct: 478 YIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPT 537

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T TY + I+G  K G +  A+ ++  +       +I  Y S IDG C++   ++A++L  
Sbjct: 538 TMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLI 597

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            + C  + P++  Y+  I   C  G M  A    + + ++ + PNV  ++  + G+  + 
Sbjct: 598 YMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLK 657

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             ++  +  + M +  +  D  I + ++D  +K
Sbjct: 658 MMAEASKFYYSMIKQRIAADTEIYTTLIDGFSK 690



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 208/443 (46%), Gaps = 43/443 (9%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD   +   I GLC       A  +  K+R  G +P  FTY ++V+ L +      AL L
Sbjct: 221 PDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRL 280

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            ++M    G+     + +    TT++ G C  G + KA +L  +     + P  VTYT +
Sbjct: 281 KDQMLLATGK-----KMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVL 335

Query: 141 IRGFCYAKDW-NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I+G C A+   +E  +L  +M++QG+ P+   FN+++  L +N + ++A  L DL++  G
Sbjct: 336 IKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTG 394

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V PD FTY  L+       +V+ A  L+  M+  G K ++ +   L+ GYC+   ++ AL
Sbjct: 395 V-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEAL 453

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            LYSEM  KG  P+ V + TL  G  +    ++A+ L +EM +NGV+   +TY       
Sbjct: 454 KLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTY------- 506

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
                                       N LI+GLC   R+    E+ +       VP  
Sbjct: 507 ----------------------------NILINGLCMVDRVCEVDEMLKRFVSEGFVPTT 538

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +TY+ +I G    G M  A  ++  M E  + PN++T+   I G+ R N     ++LL  
Sbjct: 539 MTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 598

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M+   + PD +  +  +++  K 
Sbjct: 599 MRCNGIHPDIAAYNAFINMFCKQ 621



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 189/403 (46%), Gaps = 8/403 (1%)

Query: 46  FTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
           ++++   G  PD  + T L+    R +    AL LF+EM    G +      +   Y  +
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEM-RCKGYYA-----DAKMYDVV 194

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           +           A  L  +M    +KP+   Y   I G C  +D + A ++  +M + G+
Sbjct: 195 MRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGL 254

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLD-LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           +P   T+N ++D L K G+MDEA RL D +++  G + D F   TL+ G+CL G +  A 
Sbjct: 255 KPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKAL 314

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +LF      G   T  +Y++LI G       +    L  +M+ +G+ P     N +  GL
Sbjct: 315 DLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGL 374

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               Q E A  LFD +   GV  D +TY   I  L K+  + EAV L+  ++    +  I
Sbjct: 375 LRNKQWEDAIALFDLVVDTGVP-DVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSI 433

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
              +SL+ G C+ G ++ AL+L+  +P     PN VTY+ ++ G       DKA  L  +
Sbjct: 434 VTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNE 493

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           M +N V     T+++LI G   ++   +V E+L +      +P
Sbjct: 494 MHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVP 536



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 41/332 (12%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P+ VT+T+L+KG   +    +A AL  ++   G     +TY  L+NGLC         
Sbjct: 464 FPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEV- 522

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
              +EM       G V  P T+TY +II+G  K G +  A  +  QM +K I PN+VTYT
Sbjct: 523 ---DEMLKRFVSEGFV--PTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYT 577

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S I G+C     + A +L I M   G+ P++  +N  ++  CK G M  A   L L+++ 
Sbjct: 578 SFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKD 637

Query: 199 GVRPDAFTYN-----------------------------------TLLDGFCLTGRVNHA 223
           G+ P+   YN                                   TL+DGF   G V  A
Sbjct: 638 GLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFA 697

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            EL+  M +        +++ L +G C++ +I+GA  L  +M    + P+ V +N L   
Sbjct: 698 LELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINA 757

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
                +++ AF+L D+M  +GV  D  TY  F
Sbjct: 758 HIRDGKLQEAFQLHDKMLSSGVVPDDTTYNIF 789



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 3/239 (1%)

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           +  M + G      S + L+    +      AL+L+ EM  KG   D  +++ +      
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
                 A +LFDEM   GV  D   Y   I GLCK      AV++   +R    +     
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260

Query: 347 YNSLIDGLCKSGRLEIALELFRS--LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
           YNS++D L K GR++ AL L     L  G  + +V   + ++ G C  G++ KA DLF +
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKM-DVFLATTLMQGYCLHGEIGKALDLFDE 319

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
              + V P  +T+ +LI+G        +  +L  +M E  ++P     ++V+  L +N+
Sbjct: 320 AVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNK 378



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 6/102 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V+    +   +L +   PD  TFT+L  GLC    I  A  L   +      P+  T
Sbjct: 691 VGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVT 750

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTY 102
           Y  L+N   R      A  L ++M +     GVV  P+  TY
Sbjct: 751 YNMLINAHIRDGKLQEAFQLHDKMLSS----GVV--PDDTTY 786


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 230/459 (50%), Gaps = 7/459 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ +     L  ++   F PD V  T LIKG      + +A  +   L  +G +PDV++Y
Sbjct: 76  GKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSY 134

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G  + +    A  +F+ M +          P+ VTY  +I  LC  G ++ A E+
Sbjct: 135 NAMISGFSKANQIDSANQVFDRMRSRG------FSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + ++     KP+V+TYT +I         NEA  LF E++ +G++P++ T+N I+  +CK
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G  D A   +  +   G  PD  +YN LL  F    R    + L   M   GC+  V +
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +SILI+ +C+   +  A+++   M  KG+ PD   ++ L     +  +++ A +  ++M 
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   D   Y T +  LCK G    A+++F  L  + C   +RAYN++   L   G   
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            ALE+   +    + P+ +TY+ +I  LC DG +D+A  L +DME     P VI+F++++
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            G  + +   + IELL  M E   +P+ +   ++++ +A
Sbjct: 489 LGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIA 527



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 208/392 (53%), Gaps = 6/392 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V  R+    F+PD VT+  +I  LC+  ++  A  +  +L   GC+P V TYT L+    
Sbjct: 153 VFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATI 212

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  AL LF+E+ +          P+  TY  II G+CKEG  D+A + +  +  + 
Sbjct: 213 LEGRINEALELFDELVSRG------LRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARG 266

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
             P+VV+Y  ++R F     W + +RL  +M+  G +PNVVT ++++   C+ G++ EA 
Sbjct: 267 CNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAV 326

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +L++M + G+ PD+++Y+ L+  FC  GR++ A E    M S GC   + +Y+ ++   
Sbjct: 327 NVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATL 386

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK    + AL ++ ++   G  P V  +NT+F  L+      +A ++  EM R G+  D 
Sbjct: 387 CKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDE 446

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY + I  LC++G + EA+ L   +   + +  + ++N ++ G+CK+ R+   +EL  +
Sbjct: 447 ITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLIT 506

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
           +     +PN  +Y ++I G+   G   +A +L
Sbjct: 507 MVEKGCLPNETSYVLLIEGIAYAGWRAEAMEL 538



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           IL++   PD  ++ ++I G    ++I  A  +F ++R  G  PDV TY  ++  LC    
Sbjct: 122 ILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGK 181

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
             +A  + +E+          C+P+ +TYT +I+    EG +++A EL  ++  + ++P+
Sbjct: 182 LELAFEVMDELLKDG------CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPD 235

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           + TY ++IRG C     + A      +  +G  P+VV++N+++       + ++  RL+ 
Sbjct: 236 LYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMK 295

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            M+  G  P+  T++ L+  FC  GRV  A  +   M+  G     +SY  LI+ +CK  
Sbjct: 296 DMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEG 355

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++ A+    +M+S G  PD+V +NT+   L +    + A  +F+++   G       Y 
Sbjct: 356 RLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYN 415

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T    L   G  ++A+E+   +     + D   YNSLI  LC+ G ++ A+ L   +   
Sbjct: 416 TMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEAT 475

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P V++++I++ G+C   ++ +  +L + M E   +PN  ++ +LI G       ++ 
Sbjct: 476 RFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEA 535

Query: 434 IELLHKMKEINVM 446
           +EL + +  + V+
Sbjct: 536 MELANSLYRLGVI 548



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 193/399 (48%), Gaps = 7/399 (1%)

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+N  CR      +L   E + +         +P+ V  T +I G      + KA  ++ 
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKG------FKPDVVLCTKLIKGFFNSRNLKKAMRVM- 120

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           ++ +    P+V +Y ++I GF  A   + A ++F  M  +G  P+VVT+N+++  LC  G
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRG 180

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K++ A  ++D +++ G +P   TY  L++   L GR+N A ELF  + S G +  +++Y+
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYN 240

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +I G CK    + AL     + ++G  PDVV +N L        + E   +L  +M  +
Sbjct: 241 AIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLS 300

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +  T+   I   C+ G + EAV +   ++      D  +Y+ LI   CK GRL++A
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLA 360

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           +E    +     +P++V Y+ ++  LC  G  D A D+F  ++E    P V  ++ +   
Sbjct: 361 IEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSA 420

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                   K +E++ +M    + PD    + ++  L ++
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRD 459


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 212/400 (53%), Gaps = 6/400 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A + F  + +    P +  +  ++  L +  H   A++L ++M           EPN V
Sbjct: 35  DAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKG------IEPNLV 88

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T   +I+  C  G +  +  +L ++     +PN +T T++++G C   +  ++     ++
Sbjct: 89  TLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKV 148

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + QG Q N V++  +++ LCK G+   A + L ++       +   YNT++DG C    V
Sbjct: 149 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLV 208

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A + +  M + G    V +Y+ LI G+C   ++ GA SL +EM+ K I P+V  +  L
Sbjct: 209 NEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAIL 268

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +  +V+ A  L  EM   G  AD  TY + +DG CKN  + +A  LF  ++    
Sbjct: 269 IDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGI 328

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + +   Y +LIDGLCK GRL+ A +LF+ L       +V TY++MIGGLC +G +D+A  
Sbjct: 329 QPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALA 388

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +   ME+N  +PNV+TF+++IR   + +E  K  +LLH+M
Sbjct: 389 IKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 190/352 (53%), Gaps = 7/352 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++S  F VLG+ILK  + P+ +T T+L+KGLC +  + ++     K+   G + +  +
Sbjct: 100 LGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVS 159

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC+   T  A+     + + +         N V Y TIIDGLCK+  V++A +
Sbjct: 160 YGTLLNGLCKIGETRCAIKFLRMIEDSSTGL------NVVMYNTIIDGLCKDKLVNEAYD 213

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M  + I PNV+TYT++I GFC A     A  L  EM+ + + PNV T+ +++D LC
Sbjct: 214 FYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALC 273

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  LL  M   G   D  TY +LLDGFC    ++ A  LF+ M+  G +   +
Sbjct: 274 KEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKY 333

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI+G CK   ++ A  L+ ++L KG   DV  +N +  GL +   ++ A  +  +M
Sbjct: 334 TYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKM 393

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           + NG   +  T+   I  L K     +A +L H + I K     R ++ + D
Sbjct: 394 EDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM-IAKGLLRFRNFHEIED 444



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 197/386 (51%), Gaps = 6/386 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP  V F  ++  L        A +L  ++ V G EP++ T   L+N  C       + +
Sbjct: 49  TPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFS 108

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  ++        +  +PNT+T TT++ GLC +G V K+     ++  +  + N V+Y +
Sbjct: 109 VLGKI------LKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGT 162

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           ++ G C   +   A +    + D     NVV +N I+D LCK+  ++EA      M   G
Sbjct: 163 LLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARG 222

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+  TY TL+ GFCL G++  A  L   M        V++Y+ILI+  CK  +++ A 
Sbjct: 223 IFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAK 282

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +L +EM  +G   DVV + +L  G  +   +++A  LF +M+  G+  + +TY   IDGL
Sbjct: 283 NLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGL 342

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G + +A +LF  L +  C  D+  YN +I GLCK G L+ AL +   +     +PNV
Sbjct: 343 CKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNV 402

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDM 405
           VT+ I+I  L    + DKA  L  +M
Sbjct: 403 VTFEIIIRSLFKKDENDKAEKLLHEM 428



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 129/278 (46%), Gaps = 1/278 (0%)

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           D  S+   +++ H   P    +  +L         + A  L   ME  G +  + + +IL
Sbjct: 35  DAISQFNGMLLMHHT-PPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNIL 93

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           IN +C   ++  + S+  ++L  G +P+ +   TL  GL    +V+++    D++   G 
Sbjct: 94  INCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGF 153

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             +  +Y T ++GLCK G    A++    +       ++  YN++IDGLCK   +  A +
Sbjct: 154 QMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYD 213

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
            +  +    + PNV+TY+ +IGG C  GQ+  A  L  +M    + PNV T+ +LI    
Sbjct: 214 FYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALC 273

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +  +  +   LL +M       D    + ++D   KN+
Sbjct: 274 KEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQ 311


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 222/430 (51%), Gaps = 7/430 (1%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  +IKGL  + R  +A  L  +L V    PDVFTY  L++ LC+      A+NL+++M 
Sbjct: 364 FNLVIKGLLRDKRWKDAIGLL-ELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMK 422

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
               E GV  +P+ VTY +++ G C++G +D+A +L  +M DK   PN VTYT++++G+ 
Sbjct: 423 ----EAGV--KPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYI 476

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
             K ++ A  L  EM   GV     T+N++++ L    ++ E   +L   +  G  P   
Sbjct: 477 KKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTM 536

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN++++GF   G +  A  ++  M   G    + +Y+  I+GYC+    + A+ L   +
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYV 596

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
              GI+PD+  +N       +   + RA      + ++G+  D   Y +F+ G      +
Sbjct: 597 RRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMM 656

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA + ++++   +   D   Y +LIDG  K G +  ALEL+  +    ++P+  T++ +
Sbjct: 657 AEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTAL 716

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
             GLC  G +D A+ L  DM    V PN++T++MLI   +R  +  +  +L  +M    V
Sbjct: 717 THGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGV 776

Query: 446 MPDASIVSIV 455
           +PD +   I+
Sbjct: 777 VPDDTTYDIL 786



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 197/402 (49%), Gaps = 6/402 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+  LI  LC   ++ EA  L+ K++  G +P + TY +L+ G C       AL L
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + EM +          PN VTYTT++ G  K+   D A  LL +M+   +     TY  +
Sbjct: 453 YSEMPDKG------FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNIL 506

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G        E   +    + +G  P  +T+N I++   K G M  A  +   M + G+
Sbjct: 507 INGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  TY + +DG+C T   + A +L + +   G +  + +Y+  I+ +CK   +  AL 
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
               +L  G+ PDV ++N+   G   +  +  A K +  M +  V ADT  Y T IDG  
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G +  A+EL+  +       D + + +L  GLC+SG ++ A  L   +    + PN+V
Sbjct: 687 KVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV 746

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           TY+++I     DG++ +A  L  +M  + VVP+  T+D+L R
Sbjct: 747 TYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 226/453 (49%), Gaps = 8/453 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFTYTTLVNGL 68
           VLG++ ++ F P  +T++S++  L    R+ EA  L  + L   G + DV   T L++G 
Sbjct: 242 VLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGY 301

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C       AL+LF+E+ +     GV   P  VTY  +I G   EG  D+  +L  QM ++
Sbjct: 302 CLHGEVGKALDLFDEVVSD----GVT--PTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQ 355

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            +  +   +  VI+G    K W +A  L   ++D GV P+V T+  ++  LCK+ K+ EA
Sbjct: 356 GLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEA 414

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             L D M + GV+P   TY++LL G+C  GR++ A +L+  M   G      +Y+ L+ G
Sbjct: 415 VNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKG 474

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           Y K K  + A +L +EM   G+      +N L  GL+ +++V    ++       G    
Sbjct: 475 YIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPT 534

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T TY + I+G  K G +  A  ++  +R      +I  Y S IDG C++   ++A++L  
Sbjct: 535 TMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLI 594

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    + P++  Y+  I   C  G M +A    + + ++ + P+V  ++  + G+  + 
Sbjct: 595 YVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLK 654

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             ++  +  + M +  V+ D  I + ++D  +K
Sbjct: 655 MMAEASKFYYSMIKQRVVADTEIYTTLIDGFSK 687



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 224/512 (43%), Gaps = 82/512 (16%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R++     PDA + T L+      +   +A  LF ++R  GC  D   Y  ++    R  
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
               A+ LF+EMA      G   +P+   Y   I GLCK    D+A ++L +M++   +P
Sbjct: 200 MHCDAVRLFDEMA------GAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEP 253

Query: 133 NVVTYTSVI------------------------------------RGFCYAKDWNEAKRL 156
             +TY+SV+                                     G+C   +  +A  L
Sbjct: 254 WELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDL 313

Query: 157 FIEMMDQGVQPNVVT-----------------------------------FNVIMDELCK 181
           F E++  GV P  VT                                   FN+++  L +
Sbjct: 314 FDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLR 373

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + +  +A  LL+L++  GV PD FTY  L+   C   +++ A  L+  M+  G K ++ +
Sbjct: 374 DKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVT 432

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  L+ GYC+   ++ AL LYSEM  KG  P+ V + TL  G  +    + A+ L +EM+
Sbjct: 433 YHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMR 492

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGR 359
           +NGV+   +TY   I+GL     + E  E+    R L   F      YNS+I+G  K+G 
Sbjct: 493 QNGVSCGDYTYNILINGLYMVNRVCEVDEMLK--RFLSEGFVPTTMTYNSIINGFVKAGM 550

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A  ++R +    + PN+VTY+  I G C     D A  L + +  + + P++  ++ 
Sbjct: 551 MGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNA 610

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            I  F +    S+ +  L  + +  + PD ++
Sbjct: 611 FIDTFCKQGNMSRALHFLVLLLKDGLTPDVTV 642



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 164/330 (49%), Gaps = 6/330 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +   +    F P+ VT+T+L+KG   +     A AL  ++R  G     +TY
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGL    + +  +   +EM       G V  P T+TY +II+G  K G +  A  +
Sbjct: 504 NILINGL----YMVNRVCEVDEMLKRFLSEGFV--PTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM+ K I PN+VTYTS I G+C     + A +L I +   G+QP++  +N  +D  CK
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCK 617

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G M  A   L L+++ G+ PD   YN+ + G+     +  A + + SM           
Sbjct: 618 QGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEI 677

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+ K   +  AL LYSEM++  + PD      L  GL     ++ A +L D+M+
Sbjct: 678 YTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMR 737

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           R  V+ +  TY   I+   ++G + EA +L
Sbjct: 738 RLDVSPNIVTYNMLINACVRDGKLQEAFQL 767



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 191/403 (47%), Gaps = 8/403 (1%)

Query: 46  FTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
           ++++   G  PD  + T L+    R +    AL LF+EM  G G     C  +   Y  +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEM-RGKG-----CYADAKMYDVV 191

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I    + G    A  L  +M    +KP+   Y   I G C  +D + A ++  +M + G 
Sbjct: 192 IRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGF 251

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLD-LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           +P  +T++ ++D L K G+MDEA RL D +++  G + D      L+ G+CL G V  A 
Sbjct: 252 EPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKAL 311

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +LF  + S G   T  +Y +LI G       +    L  +M+ +G+       N +  GL
Sbjct: 312 DLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGL 371

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               + + A  L + +   GV  D +TY   I  LCK+  + EAV L+  ++    +  I
Sbjct: 372 LRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSI 430

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y+SL+ G C+ GR++ AL+L+  +P     PN VTY+ ++ G       D A  L  +
Sbjct: 431 VTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNE 490

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           M +N V     T+++LI G   +N   +V E+L +      +P
Sbjct: 491 MRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVP 533



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 6/271 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L R L   F P  +T+ S+I G      +  A  ++ ++R  G  P++ TYT+ ++G C
Sbjct: 522 MLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYC 581

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           RT+   +A+ L   +           +P+   Y   ID  CK+G + +A   L+ +    
Sbjct: 582 RTNCCDLAVKLLIYVRRDG------IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDG 635

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P+V  Y S + G+   K   EA + +  M+ Q V  +   +  ++D   K G +  A 
Sbjct: 636 LTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFAL 695

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L   M+ + V PD  T+  L  G C +G ++ AK L   M  +     + +Y++LIN  
Sbjct: 696 ELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINAC 755

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
            ++ +++ A  L+ EMLS G+ PD   ++ L
Sbjct: 756 VRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 211/414 (50%), Gaps = 6/414 (1%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
           L  ++++ G +P+ +TY  ++  LC+T     A  +  EM +     G+   P+ V YTT
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE----GIA--PDGVIYTT 263

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           +IDG CK G V  A  L  +M+ + I P+ +TYT+VI G C      EA +LF EM+ + 
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           ++P+ VT+  ++D  CK GKM EA  L + M+Q G+ P+  TY  L DG C  G V+ A 
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           EL   M   G +  +++Y+ L+NG CK   I+ A+ L  +M   G  PD V + TL    
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +  ++ RA +L  +M    +     T+   ++G C +G + +  +L   +       + 
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YNSLI   C    +    E++R +    +VP+  TY+I+I G C    M +A  L  D
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           M        V +++ LI+GF +  +  +  EL  +M+   ++ D  I +I  D+
Sbjct: 564 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADI 617



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 210/418 (50%), Gaps = 12/418 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V+    VL  ++     PD V +T+LI G C    +  A  LF +++     PD  TY
Sbjct: 237 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITY 296

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC---EPNTVTYTTIIDGLCKEGFVDKA 118
           T ++ GLC+T   + A  LF EM         VC   EP+ VTYT +IDG CKEG + +A
Sbjct: 297 TAVICGLCQTGRVMEADKLFHEM---------VCKRLEPDEVTYTALIDGYCKEGKMKEA 347

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             L  QM    + PN+VTYT++  G C   + + A  L  EM  +G++ N+ T+N +++ 
Sbjct: 348 FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNG 407

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LCK G +D+A +L+  M   G  PDA TY TL+D +C +  +  A EL   M     + T
Sbjct: 408 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 467

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V ++++L+NG+C +  +E    L   ML KGI P+   +N+L       + +    +++ 
Sbjct: 468 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 527

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
            M   GV  D  TY   I G CK   + EA  L   +        + +YN+LI G  K  
Sbjct: 528 GMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRK 587

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           +   A ELF  +    LV +   Y+I      ++G+M+   +L  +  E  +V ++ T
Sbjct: 588 KFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 645



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 187/366 (51%), Gaps = 6/366 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G VS  + +   + K   +PD +T+T++I GLC   R+MEA  LF ++     EPD  T
Sbjct: 271 LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 330

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G C+      A +L  +M     + G+   PN VTYT + DGLCK G VD A E
Sbjct: 331 YTALIDGYCKEGKMKEAFSLHNQML----QMGLT--PNIVTYTALADGLCKCGEVDTANE 384

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  K ++ N+ TY S++ G C A + ++A +L  +M   G  P+ VT+  +MD  C
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+ +M  A  LL  M+   ++P   T+N L++GFC++G +   ++L   M   G      
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 504

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI  YC    +     +Y  M +KG+ PD   +N L  G  +   ++ A+ L  +M
Sbjct: 505 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 564

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G      +Y   I G  K    +EA ELF  +R      D   YN   D     G++
Sbjct: 565 VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKM 624

Query: 361 EIALEL 366
           E+ LEL
Sbjct: 625 ELTLEL 630



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 183/337 (54%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L+ +M+ K +KPN  TY  VI   C      EA+R+  EM+ +G+ P+ V +  ++D  
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G +  A RL D M +  + PD  TY  ++ G C TGRV  A +LF  M     +   
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+GYCK  +++ A SL+++ML  G+ P++V +  L  GL +  +V+ A +L  E
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M R G+  + +TY + ++GLCK G I +AV+L   + +     D   Y +L+D  CKS  
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  A EL R +    L P VVT+++++ G C  G ++    L   M E  ++PN  T++ 
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           LI+ +   N      E+   M    V+PD +  +I++
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 545



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 159/313 (50%), Gaps = 6/313 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   F +  ++L+   TP+ VT+T+L  GLC    +  A  L  ++   G E +++TY
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 401

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +LVNGLC+  +   A+ L ++M            P+ VTYTT++D  CK   + +A EL
Sbjct: 402 NSLVNGLCKAGNIDQAVKLMKDMEVAG------FHPDAVTYTTLMDAYCKSREMVRAHEL 455

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L QM D+ ++P VVT+  ++ GFC +    + ++L   M+++G+ PN  T+N ++ + C 
Sbjct: 456 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 515

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              M   + +   M   GV PD  TYN L+ G C    +  A  L   M   G   TV S
Sbjct: 516 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 575

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G+ K K+   A  L+ +M  +G+  D  I+N      ++  ++E   +L DE  
Sbjct: 576 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAI 635

Query: 302 RNGVAADTWTYRT 314
              +  D  T  T
Sbjct: 636 EKCLVGDIQTKNT 648



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 160/312 (51%), Gaps = 7/312 (2%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNG-------KMDEASRLLDLMIQHGVRPDAF 205
           A++LF +M++ G+  +V + N+ +  L ++        K +   +L++ M   G++P+ +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN ++   C TG+V  A+ +   M S G       Y+ LI+G+CK   +  A  L+ EM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             + I PD + +  +  GL +  +V  A KLF EM    +  D  TY   IDG CK G +
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA  L + +  +    +I  Y +L DGLCK G ++ A EL   +    L  N+ TY+ +
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + GLC  G +D+A  L  DME     P+ +T+  L+  + +  E  +  ELL +M +  +
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 446 MPDASIVSIVVD 457
            P     +++++
Sbjct: 465 QPTVVTFNVLMN 476



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 147/283 (51%), Gaps = 7/283 (2%)

Query: 188 ASRLLDLMIQHGVRPDAFTYNTL-------LDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           A +L D M+ +G+     + N         LDG  +  +     +L   M+  G K   +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +I   CK  ++  A  +  EM+S+GI PD VI+ TL  G  ++  V  A++LFDEM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           Q+  ++ D  TY   I GLC+ G ++EA +LFH +   + E D   Y +LIDG CK G++
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  L   +    L PN+VTY+ +  GLC  G++D A +L  +M    +  N+ T++ L
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + G  +     + ++L+  M+     PDA   + ++D   K+ 
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 215/439 (48%), Gaps = 9/439 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           P  VT+ +L+     E R  + A L  ++  R  GC P+  TY  ++ GL R      A 
Sbjct: 202 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 261

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            L E M           + ++ TY  +I GL   G V K  +L L+M+++ I P VVTY 
Sbjct: 262 ELVEGMRLSK-------KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 314

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I G   +     A+  F EM   G+ P+V+T+N +++  CK G + EA  L   + + 
Sbjct: 315 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 374

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P   TYN  +DG+C  G +  A+ L   M   GC   V +Y+IL+ G      +  A
Sbjct: 375 GLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMA 434

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
              + EMLSKG++PD   +NT       +  + RA +L + +   G+++DT TY   I G
Sbjct: 435 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHG 494

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G + +A EL   +     + D   Y  LI   C+ G L  A ++F ++    L+P+
Sbjct: 495 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 554

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            VT++++I   C  G +  A   F  M E  V PN IT+++LI    R+          H
Sbjct: 555 AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 614

Query: 439 KMKEINVMPDASIVSIVVD 457
           +M E  ++ +    ++++D
Sbjct: 615 EMLERGLVANKYTYTLLID 633



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 223/462 (48%), Gaps = 9/462 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD      +++ L   +R  +  A+  ++   G EP + TY TL++   +         
Sbjct: 166 APDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAM 225

Query: 80  LFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           L +EM   G+G     C PN VTY  +I GL ++G +++A EL+  M+    K +  TY 
Sbjct: 226 LLKEMETRGSG-----CLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFTYN 279

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G        +   L +EM ++G+ P VVT+N ++  L ++G ++ A      M   
Sbjct: 280 PLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAM 339

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  TYN+LL+G+C  G +  A  LF  +   G   TV +Y+I I+GYC+  ++E A
Sbjct: 340 GLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEA 399

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L  EM  +G  P+V  +  L  G   +  +  A + FDEM   G+  D + Y T I  
Sbjct: 400 RILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICA 459

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
               G I  A+EL   L +     D   YN LI GLCK+G L+ A EL   +    L P+
Sbjct: 460 ELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 519

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            +TY+ +I   C  G + +AR +F +M  + ++P+ +TF ++I  + R            
Sbjct: 520 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 579

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           KM E  V P+    ++++  L +  +    L S   HE  E 
Sbjct: 580 KMLEEGVEPNEITYNVLIHALCR--MGRTQLASHHFHEMLER 619



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 194/403 (48%), Gaps = 6/403 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            + T+  LI GL A   + +   L  ++   G  P V TY  +++GL ++     A   F
Sbjct: 274 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 333

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM       G++  P+ +TY ++++G CK G + +A  L   ++   + P V+TY   I
Sbjct: 334 AEMR----AMGLL--PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRI 387

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C   D  EA+ L  EM +QG  PNV T+ ++M        +  A    D M+  G++
Sbjct: 388 DGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQ 447

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD F YNT +    + G +  A EL   +   G      +Y+ILI+G CK   ++ A  L
Sbjct: 448 PDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKEL 507

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             +M+S G++PD + +  L     E   +  A K+F+ M  +G+     T+   I   C+
Sbjct: 508 QMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCR 567

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G +  A   F  +     E +   YN LI  LC+ GR ++A   F  +    LV N  T
Sbjct: 568 RGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYT 627

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           Y+++I G C  G  + A   + +M +N + P+ +T   L++GF
Sbjct: 628 YTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 175/369 (47%), Gaps = 41/369 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+ ++I GL     +  A   F ++R  G  PDV TY +L+NG C+  +   AL L
Sbjct: 308 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 367

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F ++            P  +TY   IDG C+ G +++A+ L  +M ++   PNV TYT +
Sbjct: 368 FGDLRRAG------LAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTIL 421

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPN-------------------------------- 168
           ++G         A+  F EM+ +G+QP+                                
Sbjct: 422 MKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGI 481

Query: 169 ---VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
               VT+N+++  LCK G + +A  L   M+ +G++PD  TY  L+   C  G +  A++
Sbjct: 482 SSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARK 541

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F +M S G   +  +++++I+ YC+   +  A   + +ML +G++P+ + +N L   L 
Sbjct: 542 IFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 601

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
            + + + A   F EM   G+ A+ +TY   IDG CK G   +A+  +  +       D  
Sbjct: 602 RMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYL 661

Query: 346 AYNSLIDGL 354
            + +L+ G 
Sbjct: 662 THKALVKGF 670



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 143/316 (45%), Gaps = 30/316 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    ++ G + ++   P  +T+   I G C    + EA  L  ++   GC P+V TY
Sbjct: 359 GNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTY 418

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGN------------------GEFGVVCE------- 96
           T L+ G        +A   F+EM +                    G+     E       
Sbjct: 419 TILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLML 478

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                +TVTY  +I GLCK G +  AKEL ++M    ++P+ +TYT +I   C      E
Sbjct: 479 EGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 538

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+++F  M+  G+ P+ VTF VI+   C+ G +  A      M++ GV P+  TYN L+ 
Sbjct: 539 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 598

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
             C  GR   A   F  M   G     ++Y++LI+G CK    E A+  Y EM   GI P
Sbjct: 599 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHP 658

Query: 273 DVVIHNTLFVGLFEIH 288
           D + H  L  G F+ H
Sbjct: 659 DYLTHKALVKG-FDGH 673



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 148/295 (50%), Gaps = 5/295 (1%)

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
           F EM   GV P+V   N ++  L    + D+   + + M+Q G+ P   TYNTLLD F  
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 217 TGRVNHAKELFVSMESM--GCKHTVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPD 273
            GR +    L   ME+   GC     +Y+++I G  +  ++E A  L   M LSK  K  
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK--KAS 274

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +N L  GL     V++ + L  EM+  G+     TY   I GL ++G +  A   F 
Sbjct: 275 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 334

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R +    D+  YNSL++G CK+G L+ AL LF  L    L P V+TY+I I G C  G
Sbjct: 335 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLG 394

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +++AR L  +M E   +PNV T+ +L++G + +   +   E   +M    + PD
Sbjct: 395 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPD 449



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 165/340 (48%), Gaps = 3/340 (0%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M    + P+V     V+R    A  W++   +  EM+  G++P++VT+N ++D   K G
Sbjct: 159 EMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEG 218

Query: 184 KMDEASRLLDLMIQH--GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + D+ + LL  M     G  P+  TYN ++ G    G +  A EL   M  +  K + F+
Sbjct: 219 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFT 277

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI G      ++    L  EM ++GI P VV +N +  GL +   VE A   F EM+
Sbjct: 278 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR 337

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  TY + ++G CK G + EA+ LF  LR       +  YN  IDG C+ G LE
Sbjct: 338 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLE 397

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  L   +     +PNV TY+I++ G  N   +  AR+ F +M    + P+   ++  I
Sbjct: 398 EARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI 457

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              + + + ++ +EL   +    +  D    +I++  L K
Sbjct: 458 CAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCK 497



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 8/206 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + D VT+  LI GLC    + +A  L  K+   G +PD  TYT L++  C       A  
Sbjct: 482 SSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARK 541

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +F  M +     G++  P+ VT+T II   C+ G +  A     +M ++ ++PN +TY  
Sbjct: 542 IFNNMISD----GLL--PSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 595

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I   C       A   F EM+++G+  N  T+ +++D  CK G  ++A R    M Q+G
Sbjct: 596 LIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNG 655

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKE 225
           + PD  T+  L+ GF   G V+H  E
Sbjct: 656 IHPDYLTHKALVKGF--DGHVHHTIE 679



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 38/236 (16%)

Query: 259 LSLYSEMLSKGIKPDV-----------------------------------VIHNTLFVG 283
           LS + EM S G+ PDV                                   V +NTL   
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 284 LFEIHQVERAFKLFDEMQRNGVA--ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             +  + ++   L  EM+  G     +  TY   I GL + G + EA EL   +R+ K +
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-K 272

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
                YN LI GL   G ++   +L   +    ++P VVTY+ MI GL   G ++ A+  
Sbjct: 273 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           F +M    ++P+VIT++ L+ G+ +     + + L   ++   + P     +I +D
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRID 388


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 217/448 (48%), Gaps = 12/448 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+S     L  +++  F  D  T T +I   C +         F K    G +P++  
Sbjct: 244 MGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLIN 303

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T+L+NGLC+      A  + EEM     +      PN  T+T +IDGLCK+G+ +KA  
Sbjct: 304 FTSLINGLCKRGSIKQAFEMLEEMVKKGWK------PNVYTHTALIDGLCKKGWTEKAFR 357

Query: 121 LLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L L++ +  + KPNV TYTS+I G+C     N A+ L   M +QG+ PN  T+  ++D  
Sbjct: 358 LFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGH 417

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K G  ++A  L+DLM + G   + FTYN  +D  C  GR   A +L      +G +   
Sbjct: 418 SKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADT 477

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ILI+  C+  +   AL  +S+M   G++PD+  +NTL        ++E + KLF E
Sbjct: 478 VTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAE 537

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
               G+     TY + I G C++  +  A++ F+ +    C  D   Y +LI GLCK  +
Sbjct: 538 AVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESK 597

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A +L+ ++    L P  VT   +    C       A  +   +++   +  V T   
Sbjct: 598 LDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIRTVNT--- 654

Query: 420 LIRGFIRINEPSKVIELLHKM--KEINV 445
           LIR      +    +   HK+  K+ NV
Sbjct: 655 LIRKLCSERKVGMAVLFFHKLLDKDQNV 682



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 187/386 (48%), Gaps = 7/386 (1%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A N+F+EM         VC P++V+Y  +    C+ G +      L  M  +    +  T
Sbjct: 215 AENVFDEM-----RVRGVC-PDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNAT 268

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
            T +I  FC     +     F + ++ G++PN++ F  +++ LCK G + +A  +L+ M+
Sbjct: 269 CTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMV 328

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEI 255
           + G +P+ +T+  L+DG C  G    A  LF+ +  S   K  V +Y+ +I+GYCK  ++
Sbjct: 329 KKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKL 388

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
             A  L S M  +G+ P+   +  L  G  +    E+A++L D M + G +A+ +TY  F
Sbjct: 389 NRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAF 448

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           ID LCK G  +EA +L      L  + D   Y  LI  LC+      AL  F  +    +
Sbjct: 449 IDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGV 508

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P++ TY+ +I       +M+++  LF +     +VP   T+  +I G+ R    S  ++
Sbjct: 509 QPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALK 568

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAK 461
             ++M +    PD+     ++  L K
Sbjct: 569 FFNRMSDHGCTPDSLTYGALISGLCK 594



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 188/407 (46%), Gaps = 7/407 (1%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A  +F ++RV G  PD  +Y  +    CR           ++M       G V +    T
Sbjct: 215 AENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRR----GFVVD--NAT 268

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
            T +I   C++GF  +      +  +  +KPN++ +TS+I G C      +A  +  EM+
Sbjct: 269 CTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMV 328

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            +G +PNV T   ++D LCK G  ++A RL L L+     +P+  TY +++ G+C   ++
Sbjct: 329 KKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKL 388

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A+ L   M+  G      +Y+ LI+G+ K    E A  L   M  +G   ++  +N  
Sbjct: 389 NRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAF 448

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L +  +   A KL  +  R G+ ADT TY   I  LC+     EA+  F  +     
Sbjct: 449 IDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGV 508

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D+  YN+LI    +  R+E + +LF       LVP   TY+ MI G C D  +  A  
Sbjct: 509 QPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALK 568

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            F  M ++   P+ +T+  LI G  + ++  +  +L   M +  + P
Sbjct: 569 FFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSP 615



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 186/422 (44%), Gaps = 24/422 (5%)

Query: 56  PDVFTY---TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           PD  T+    T+V  L   + ++VAL+ F   A G  +F        V  T+ I     E
Sbjct: 100 PDSLTHEQAITVVASLASEAGSMVALSFFN-WAIGFPKFRYFMRFYIVCATSFIGN---E 155

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
            F ++A E++  M               +R F     + EA  + IEM + G+   V T 
Sbjct: 156 NF-ERAHEVMDCM---------------VRVFAEIGKFQEAVNMVIEMENHGLVLTVRTL 199

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N +     + G +  A  + D M   GV PD+ +Y  +   +C  GR++        M  
Sbjct: 200 NCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVR 259

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G      + +++I+ +C+          + + +  G+KP+++   +L  GL +   +++
Sbjct: 260 RGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQ 319

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLI 351
           AF++ +EM + G   + +T+   IDGLCK G+  +A  LF  L R    + ++  Y S+I
Sbjct: 320 AFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMI 379

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            G CK  +L  A  L   +    LVPN  TY+ +I G    G  +KA +L   M +    
Sbjct: 380 HGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFS 439

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
            N+ T++  I    +     +  +LL K   + +  D    +I++  L +   +  +L  
Sbjct: 440 ANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVF 499

Query: 472 FT 473
           F+
Sbjct: 500 FS 501



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 60/158 (37%), Gaps = 33/158 (20%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T+TS+I G C +  +  A   F ++   GC PD  TY  L++GLC+ S    A  L
Sbjct: 545 PTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQL 604

Query: 81  FEEMANGNGEFGVVCEPNTVTYT-----------------------------TIIDGLCK 111
           +E M +        CE   +T                               T+I  LC 
Sbjct: 605 YEAMVDKGLS---PCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIRTVNTLIRKLCS 661

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
           E  V  A     ++ DK+   + VT T+     CY  +
Sbjct: 662 ERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTA-CYESN 698


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 227/453 (50%), Gaps = 9/453 (1%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           +LI  L     +  A  ++ ++   G   +V+T   +VN LC+            E+   
Sbjct: 195 ALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQ-- 252

Query: 88  NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
             E GV   P+ VTY T+I     +G +++A EL+  M  K   P V TY +VI G C  
Sbjct: 253 --EKGVY--PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKH 308

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
             +  AK +F EM+  G+ P+  T+  ++ E CK G   E   +   M    V PD   +
Sbjct: 309 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCF 368

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           ++++  F  +G ++ A   F S++  G       Y+ILI GYC+   I  A++L +EML 
Sbjct: 369 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQ 428

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G   DVV +NT+  GL +   +  A KLF+EM   G+  D++T    IDG CK G +  
Sbjct: 429 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQN 488

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A+ELF  ++  + + D+  YN+L+DG  K G ++ A E++  +    ++P  +++SI++ 
Sbjct: 489 AMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVN 548

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            LC+ G + +A  ++ +M   ++ P V+  + +I+G+ R    S     L KM     +P
Sbjct: 549 ALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVP 608

Query: 448 DASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           D    + ++    K E   N   +F + ++ EE
Sbjct: 609 DCISYNTLIYGFVKEE---NMSKAFGLVKKMEE 638



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 230/459 (50%), Gaps = 11/459 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+ +LI    ++  + EA  L   +   G  P V+TY T++NGLC+      A  +
Sbjct: 258 PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEV 317

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM            P++ TY +++   CK+G   + + +   M+ +++ P++V ++S+
Sbjct: 318 FAEMLRSG------LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSM 371

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  F  + + ++A   F  + + G+ P+ V + +++   C+ G + EA  L + M+Q G 
Sbjct: 372 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGC 431

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D  TYNT+L G C    +  A +LF  M   G     ++ +ILI+G+CK   ++ A+ 
Sbjct: 432 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAME 491

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L+ +M  K IK DVV +NTL  G  ++  ++ A +++ +M    +     ++   ++ LC
Sbjct: 492 LFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALC 551

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
             G++ EA  ++  +     +  +   NS+I G C+SG           +     VP+ +
Sbjct: 552 SKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCI 611

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEEN--AVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +Y+ +I G   +  M KA  L   MEE    +VP+V T++ ++ GF R N+  +   +L 
Sbjct: 612 SYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLR 671

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           KM E  V PD S  + +++     +   N   +F  H++
Sbjct: 672 KMIERGVNPDRSTYTSLINGFVSQD---NLTEAFRFHDE 707



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 228/451 (50%), Gaps = 12/451 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F ++  +    F+P   T+ ++I GLC   +   A  +F ++   G  PD  TY
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+   C+    +   N+F +M + +    VV  P+ V +++++    + G +DKA   
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSRD----VV--PDLVCFSSMMSLFTRSGNLDKALMY 387

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +K+  + P+ V YT +I+G+C     +EA  L  EM+ QG   +VVT+N I+  LCK
Sbjct: 388 FNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCK 447

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              + EA +L + M + G+ PD++T   L+DG C  G + +A ELF  M+    K  V +
Sbjct: 448 RKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVT 507

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++G+ K  +I+ A  ++++M+SK I P  +  + L   L     +  AF+++DEM 
Sbjct: 508 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMI 567

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGR 359
              +        + I G C++G   +  E+F   +++   F  D  +YN+LI G  K   
Sbjct: 568 SKSIKPTVMICNSMIKGYCRSGNASDG-EIFLE-KMISEGFVPDCISYNTLIYGFVKEEN 625

Query: 360 LEIALELFRSL--PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           +  A  L + +    G LVP+V TY+ ++ G C + QM +A  +   M E  V P+  T+
Sbjct: 626 MSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTY 685

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             LI GF+  +  ++      +M +    PD
Sbjct: 686 TSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 187/376 (49%), Gaps = 17/376 (4%)

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKN-------IKPNVVTYTS----------VI 141
           +++ + +I  L + G +  A+  +L+M  ++       +   V TY++          +I
Sbjct: 103 SLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLI 162

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           R F  A+   EA   F  +  +G   ++   N ++  L + G ++ A R+   + + GV 
Sbjct: 163 RTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVG 222

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            + +T N +++  C  G++         ++  G    + +Y+ LI+ Y     +E A  L
Sbjct: 223 VNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFEL 282

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
              M SKG  P V  +NT+  GL +  + ERA ++F EM R+G++ D+ TYR+ +   CK
Sbjct: 283 MHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 342

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G  VE   +F  +R      D+  ++S++    +SG L+ AL  F S+    L+P+ V 
Sbjct: 343 KGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 402

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+I+I G C  G + +A +L  +M +     +V+T++ ++ G  +     +  +L ++M 
Sbjct: 403 YTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 462

Query: 442 EINVMPDASIVSIVVD 457
           E  + PD+  ++I++D
Sbjct: 463 ERGLFPDSYTLTILID 478



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 18/227 (7%)

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           KHT  S S +I+   ++  +  A S    M+ +     V I N+L          +  F 
Sbjct: 100 KHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFD 159

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L                RTF+        + EA E F  LR       I A N+LI  L 
Sbjct: 160 LL--------------IRTFVQAR----KLREAYEAFTLLRSKGYTVSIDACNALIGSLV 201

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           + G +E+A  +++ +    +  NV T +IM+  LC DG+M+K      +++E  V P+++
Sbjct: 202 RIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIV 261

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T++ LI  +       +  EL+H M      P     + V++ L K+
Sbjct: 262 TYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKH 308


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 232/468 (49%), Gaps = 8/468 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     VL +++K    P+ VT+  L+ G            +   +   G   +V T
Sbjct: 239 VGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVT 298

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T L+ G C+      A  L  E+     E  VV E     Y  ++DG C+ G ++ A  
Sbjct: 299 CTMLMRGYCKKGKMDEAEKLLREVEED--ELLVVDER---VYGVLVDGYCQMGRMEDAVR 353

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M    +K N+V   ++I+G+C      EA+R+F+ M+D  ++P+  ++N ++D  C
Sbjct: 354 IRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYC 413

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + GK+ +A  L + M+  G+ P   TYNT++ G    G  + A  L+  M   G      
Sbjct: 414 REGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEI 473

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           S   +++ + K  + + A+ L+ E+L +G     V  NT+  GL ++ ++  A  +FD M
Sbjct: 474 SCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRM 533

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G++ D  TYRT  DG CKNG + EA ++   +        I  YNSLIDGL K  +L
Sbjct: 534 KELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKL 593

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
               +L   +    L PNVVTY  +I G C++ ++DKA  L+ +M E    PNV+    +
Sbjct: 594 NDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKI 653

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
           +    R +  S+   +L KM + +++   +  S   D L KN+++L +
Sbjct: 654 VSSLYRDDRISEATVILDKMLDFDILAVHNKCS---DKLVKNDLTLEA 698



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 233/512 (45%), Gaps = 76/512 (14%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MGR+     +   +L+     + V   +LIKG C   ++ EA  +F  +  +  +PD ++
Sbjct: 345 MGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYS 404

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G CR      A  L EEM  G+G       P  VTY T+I GL   G  D A  
Sbjct: 405 YNTLLDGYCREGKVSKAFMLCEEML-GDG-----ITPTVVTYNTVIKGLVDVGSYDDALH 458

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M ++ + PN ++  +++  F    D + A  L+ E++ +G   + V FN ++  LC
Sbjct: 459 LWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLC 518

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA  + D M + G+ PD  TY TL DG+C  G V  A ++   ME      ++ 
Sbjct: 519 KMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIE 578

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y+ LI+G  K +++     L  EM ++G+ P+VV + TL  G  +  ++++AF L+ EM
Sbjct: 579 MYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEM 638

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL--------------RILKCEFDIRA 346
              G   +       +  L ++  I EA  +   +              +++K +  + A
Sbjct: 639 IERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEA 698

Query: 347 ---------------------YNSLIDGLCKSGRLEIALELFRSL--------------- 370
                                YN  IDGLCKSG+L+ A  +   L               
Sbjct: 699 QKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTL 758

Query: 371 --PCGV------------------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
              C V                  L+PN+  Y+ +I GLC  G +D+A+ LF  + +  +
Sbjct: 759 IHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGL 818

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           VPN +T+++LI  + RI +  K   L  KM E
Sbjct: 819 VPNAVTYNILIGCYCRIGDLDKASRLREKMTE 850



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 163/371 (43%), Gaps = 64/371 (17%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG      ++   IL   FT   V F ++I GLC   ++MEA A+F +++  G  PD  T
Sbjct: 485 MGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEIT 544

Query: 61  YTTLVNGLCRTSHTIVALNLFE-----------EMANG--NGEFGVV------------- 94
           Y TL +G C+  +   A  +             EM N   +G F +              
Sbjct: 545 YRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQ 604

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
                PN VTY T+I G C E  +DKA  L  +M ++   PNVV  + ++         +
Sbjct: 605 TRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRIS 664

Query: 152 EAKRLFIEMMDQGVQP-----------------------------------NVVTFNVIM 176
           EA  +  +M+D  +                                     N + +N+ +
Sbjct: 665 EATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAI 724

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D LCK+GK+DEA  +L +++  G  PD FTY TL+    ++G V+ A +L   M   G  
Sbjct: 725 DGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLI 784

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             +  Y+ LING CK   I+ A  L+ ++  KG+ P+ V +N L      I  +++A +L
Sbjct: 785 PNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRL 844

Query: 297 FDEMQRNGVAA 307
            ++M   G++ 
Sbjct: 845 REKMTEEGIST 855


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 236/483 (48%), Gaps = 18/483 (3%)

Query: 12  GRILKSC-------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           GR+  +C         PD VT+ +++ G C    +  A  L  ++   G E +   YT++
Sbjct: 269 GRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSV 328

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           +  LC       AL + E+M       GV  +   V +TT+I G C +G +  A+ L  +
Sbjct: 329 IALLCNKGQVSDALRVLEDMT----MHGVALD--AVVFTTVISGFCSKGDLAAARRLFEE 382

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M+ + +  + VT+T++I G C A +  EA R+  EM+D+G+  +VVT+ V++D  CK G 
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           M EA R+ + M+   V P+  TY  L DG C  G V  A EL   M + G +  V++Y+ 
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LING CK   +E A+ + +EM + G + DV  + TL   L +  + +RA  +  EM   G
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +     TY   ++G C +G +    +L   +       ++  YNSL+   C    ++   
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTT 622

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E+++ +    + PN  TY+I+I G C    M +A     +M E  +     ++  LIR  
Sbjct: 623 EIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLL 682

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDES 484
            +  + S+      KM+   +  +  + S  +D ++ NE +L S    T+    E V+ S
Sbjct: 683 NKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMD-ISFNEDNLES----TITLCDELVEAS 737

Query: 485 NVK 487
           +VK
Sbjct: 738 HVK 740



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 215/432 (49%), Gaps = 18/432 (4%)

Query: 2   GRVSHGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV 51
           G + HG+ V G +  +              +A  +TS+I  LC + ++ +A  +   + +
Sbjct: 291 GTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTM 350

Query: 52  FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
            G   D   +TT+++G C       A  LFEEM     + G+  +   VT+T +I+GLC+
Sbjct: 351 HGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQ----KRGLAAD--RVTHTALINGLCR 404

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G + +A  +L +M DK +  +VVTYT +I G+C   +  EA R+  EM+ + V PNVVT
Sbjct: 405 AGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVT 464

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           +  + D LCK G +  A+ LL  M   G+  + +TYN+L++G C  G +  A  +   ME
Sbjct: 465 YTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEME 524

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           + G +  V++Y+ LI+  CK+ E + A ++  EML KGIKP +  +N L  G     +VE
Sbjct: 525 AAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVE 584

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
              KL + M    V  +  TY + +   C +  +    E++  +   +   +   YN LI
Sbjct: 585 GGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILI 644

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            G CK+  ++ AL   + +    L     +YS +I  L    +  +AR  F  M    + 
Sbjct: 645 KGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLT 704

Query: 412 --PNVITFDMLI 421
             P+V +F M I
Sbjct: 705 AEPDVYSFYMDI 716



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 220/460 (47%), Gaps = 33/460 (7%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F+ D  +F  L+  LC     + +A L  +LR +G  P   +   +++ L        A+
Sbjct: 196 FSSDPASFDLLL--LC-----LPSAELLRRLRQYGLSPSPESCNAVLSRLPLDE----AI 244

Query: 79  NLFEEMANGN--------------GEFGVVCE--------PNTVTYTTIIDGLCKEGFVD 116
            LF E+ + N              G     C+        P+ VTY T++ G C  G ++
Sbjct: 245 ALFRELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELE 304

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
            A +LL +M  K ++ N   YTSVI   C     ++A R+  +M   GV  + V F  ++
Sbjct: 305 NAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVI 364

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              C  G +  A RL + M + G+  D  T+  L++G C  G +  A  +   M   G  
Sbjct: 365 SGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLD 424

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +Y++LI+GYCK   +  A  +++EM+ + + P+VV +  L  GL +   V  A +L
Sbjct: 425 VDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANEL 484

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
             EM   G+  + +TY + I+GLCK G + +A+ +   +       D+  Y +LID LCK
Sbjct: 485 LHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCK 544

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           SG  + A  + + +    + P++ TY++++ G C  G+++  + L   M E  V PNV+T
Sbjct: 545 SGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVT 604

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           ++ L++ +          E+   M    V P+ +  +I++
Sbjct: 605 YNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILI 644



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 18/190 (9%)

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV---EAVELFHTLRILKCEFDIRAYN 348
           RA + F    R+ V    +TY+ F         ++    + EL   LR         + N
Sbjct: 174 RALR-FPSPHRHFVEQFIFTYKAFSSDPASFDLLLLCLPSAELLRRLRQYGLSPSPESCN 232

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +++  L     L+ A+ LFR LP      NV +++I++  L + G++  A   F   +E 
Sbjct: 233 AVLSRL----PLDEAIALFRELP----DKNVCSHNILLKALLSAGRLKDACQHF---DEM 281

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA-KNEIS-- 465
           +  P+V+T+  ++ G+    E    ++LL +M    +  +A++ + V+ LL  K ++S  
Sbjct: 282 SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDA 341

Query: 466 LNSLPSFTVH 475
           L  L   T+H
Sbjct: 342 LRVLEDMTMH 351


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 237/462 (51%), Gaps = 8/462 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +P+  T+  LIK  C + +  +A  L   +   G  PDVF+Y TL+N L +  +   AL
Sbjct: 145 LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDAL 204

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTY 137
            LF+EM     E GV   P+   Y  +IDG  K+G +  A E+  ++ K  ++ PN+ +Y
Sbjct: 205 KLFDEMP----ERGVT--PDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSY 258

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G C    ++E+  ++  M       ++ T++ ++  LC +G +D A+R+   M +
Sbjct: 259 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 318

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +GV PD   YNT+L+G+   GR+    EL+  ME  GC+ TV SY+ILI G  +N +++ 
Sbjct: 319 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDE 377

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A+S++  +  K    D + +  L  GL +   + +A  + +E +      DT+ Y + I+
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLC+ G + E   +   +    C+ +    N++I+G  ++ +LE AL  F ++      P
Sbjct: 438 GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
            VVTY+ +I GL    +  +A  L  +M      PN+IT+ +L+ G  +  +    + L 
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
            +  E    PD  + +I++  L  +    ++L  ++  +Q++
Sbjct: 558 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 221/455 (48%), Gaps = 41/455 (9%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  + +  F+PD  ++ +LI  L     + +A  LF ++   G  PDV  Y  L++G  
Sbjct: 171 LLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFF 230

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +    + A  ++E +  G   +     PN  +Y  +I+GLCK G  D++ E+  +MK   
Sbjct: 231 KKGDILNASEIWERLLKGPSVY-----PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
              ++ TY+++I G C + + + A R++ EM + GV P+VV +N +++   + G+++E  
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345

Query: 190 RLLDLMIQHGVR----------------------------------PDAFTYNTLLDGFC 215
            L  +M + G R                                   D+ TY  L+ G C
Sbjct: 346 ELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G +N A  +    E+       F+YS +ING C+   ++    +  +M   G KP+  
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           + N +  G     ++E A + F  M   G      TY T I+GL K     EA  L   +
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                + ++  Y+ L++GLC+  +L++AL L+ ++L  G   P+V  ++I+I GLC+ G+
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG-FKPDVKMHNIIIHGLCSSGK 584

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           ++ A  L+ +M++   VPN++T + L+ GF ++ +
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRD 619



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 222/495 (44%), Gaps = 57/495 (11%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           SH   V   ILK  F P  V   S         RI+E      + +   C  DV    T+
Sbjct: 40  SHTPYVFHHILKRLFDPKLVAHVS---------RIVE----LIRTQKCKCPEDVAL--TV 84

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           +    + S    AL++F+ M    G     C+P   +Y ++++ L +    D+A+   L 
Sbjct: 85  IKAYAKNSMPDQALDIFQRMHEIFG-----CQPGIRSYNSLLNALIESNKWDEAESFFLY 139

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
            +   + PN+ TY  +I+  C  K +++AK L   M +QG  P+V ++  +++ L KNG 
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGF------------------------------ 214
           M +A +L D M + GV PD   YN L+DGF                              
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259

Query: 215 ------CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
                 C  G+ + + E++  M+       +++YS LI+G C +  ++GA  +Y EM   
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G+ PDVV++NT+  G     ++E   +L+  M++ G      +Y   I GL +N  + EA
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDEA 378

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + ++  L    C  D   Y  L+ GLCK+G L  AL +      G    +   YS MI G
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMING 438

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC +G++D+   +   M ++   PN    + +I GF+R ++    +     M      P 
Sbjct: 439 LCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498

Query: 449 ASIVSIVVDLLAKNE 463
               + +++ L+K E
Sbjct: 499 VVTYNTLINGLSKAE 513



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 162/287 (56%), Gaps = 6/287 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           V++  LI+GL   +++ EA +++  L    C  D  TY  LV+GLC+  +   AL++ EE
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 419

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
             NG G+       +T  Y+++I+GLC+EG +D+   +L QM     KPN     +VI G
Sbjct: 420 AENGRGDL------DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVING 473

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           F  A    +A R F  M+ +G  P VVT+N +++ L K  +  EA  L+  M+  G +P+
Sbjct: 474 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPN 533

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             TY+ L++G C   +++ A  L+      G K  V  ++I+I+G C + ++E AL LYS
Sbjct: 534 MITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYS 593

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           EM  +   P++V HNTL  G +++   ERA K++D + ++  +++ +
Sbjct: 594 EMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCY 640



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 211/402 (52%), Gaps = 8/402 (1%)

Query: 2   GRVSHGFVVLGRILKS-CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G + +   +  R+LK     P+  ++  +I GLC   +  E+  ++ +++      D++T
Sbjct: 233 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 292

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TL++GLC + +   A  +++EMA    E GV   P+ V Y T+++G  + G +++  E
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMA----ENGV--SPDVVVYNTMLNGYLRAGRIEECLE 346

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M+ +  +  VV+Y  +IRG       +EA  ++  + ++    + +T+ V++  LC
Sbjct: 347 LWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG +++A  +L+         D F Y+++++G C  GR++    +   M   GCK    
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
             + +ING+ +  ++E AL  +  M+SKG  P VV +NTL  GL +  +   A+ L  EM
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   +  TY   ++GLC+   +  A+ L+        + D++ +N +I GLC SG++
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           E AL+L+  +     VPN+VT++ ++ G       ++A  ++
Sbjct: 586 EDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIW 627



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 6/196 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL ++ K    P+     ++I G    S++ +A   F  +   GC P V TY
Sbjct: 443 GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 502

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NGL +      A  L +EM +   +      PN +TY+ +++GLC+   +D A  L
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWK------PNMITYSLLMNGLCQGKKLDMALNL 556

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             Q  +K  KP+V  +  +I G C +    +A +L+ EM  +   PN+VT N +M+   K
Sbjct: 557 WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616

Query: 182 NGKMDEASRLLDLMIQ 197
               + AS++ D ++Q
Sbjct: 617 VRDFERASKIWDHILQ 632



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 7/155 (4%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           + K CF P  VT+ +LI GL    R  EA AL  ++   G +P++ TY+ L+NGLC+   
Sbjct: 491 VSKGCF-PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
             +ALNL+ +      E G   +P+   +  II GLC  G V+ A +L  +MK +   PN
Sbjct: 550 LDMALNLWCQAL----EKGF--KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPN 603

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
           +VT+ +++ GF   +D+  A +++  ++      N
Sbjct: 604 LVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 1/156 (0%)

Query: 314 TFIDGLCKNGYIVEAVELFHTLR-ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
           T I    KN    +A+++F  +  I  C+  IR+YNSL++ L +S + + A   F     
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L PN+ TY+I+I   C   Q DKA++L   M E    P+V ++  LI    +    S 
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
            ++L  +M E  V PD +  +I++D   K    LN+
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNA 238



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 8/185 (4%)

Query: 293 AFKLFDEMQR-NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           A  +FD + R  G +   + +   +  L     +     +   +R  KC+       ++I
Sbjct: 26  ALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVI 85

Query: 352 DGLCKSGRLEIALELFRSLP----CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
               K+   + AL++F+ +     C    P + +Y+ ++  L    + D+A   FL  E 
Sbjct: 86  KAYAKNSMPDQALDIFQRMHEIFGCQ---PGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
             + PN+ T+++LI+   R  +  K  ELL+ M E    PD      +++ LAKN    +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 468 SLPSF 472
           +L  F
Sbjct: 203 ALKLF 207


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 237/462 (51%), Gaps = 8/462 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +P+  T+  LIK  C + +  +A  L   +   G  PDVF+Y TL+N L +  +   AL
Sbjct: 145 LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDAL 204

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTY 137
            LF+EM     E GV   P+   Y  +IDG  K+G +  A E+  ++ K  ++ PN+ +Y
Sbjct: 205 KLFDEMP----ERGVT--PDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSY 258

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G C    ++E+  ++  M       ++ T++ ++  LC +G +D A+R+   M +
Sbjct: 259 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 318

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +GV PD   YNT+L+G+   GR+    EL+  ME  GC+ TV SY+ILI G  +N +++ 
Sbjct: 319 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDE 377

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A+S++  +  K    D + +  L  GL +   + +A  + +E +      DT+ Y + I+
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLC+ G + E   +   +    C+ +    N++I+G  ++ +LE AL  F ++      P
Sbjct: 438 GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
            VVTY+ +I GL    +  +A  L  +M      PN+IT+ +L+ G  +  +    + L 
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
            +  E    PD  + +I++  L  +    ++L  ++  +Q++
Sbjct: 558 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 222/495 (44%), Gaps = 57/495 (11%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           SH   V   ILK  F P  V   S         RI+E      + +   C  DV    T+
Sbjct: 40  SHTPYVFHHILKRLFDPKLVAHVS---------RIVE----LIRTQKCKCPEDV--ALTV 84

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           +    + S    AL++F+ M    G     C+P   +Y ++++ L +    D+A+   L 
Sbjct: 85  IKAYAKNSMPDQALDIFQRMHEIFG-----CQPGIRSYNSLLNALIESNKWDEAESFFLY 139

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
            +   + PN+ TY  +I+  C  K +++AK L   M +QG  P+V ++  +++ L KNG 
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGF------------------------------ 214
           M +A +L D M + GV PD   YN L+DGF                              
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259

Query: 215 ------CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
                 C  G+ + + E++  M+       +++YS LI+G C +  ++GA  +Y EM   
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G+ PDVV++NT+  G     ++E   +L+  M++ G      +Y   I GL +N  + EA
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDEA 378

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
           + ++  L    C  D   Y  L+ GLCK+G L  AL +      G    +   YS MI G
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMING 438

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC +G++D+   +   M ++   PN    + +I GF+R ++    +     M      P 
Sbjct: 439 LCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498

Query: 449 ASIVSIVVDLLAKNE 463
               + +++ L+K E
Sbjct: 499 VVTYNTLINGLSKAE 513



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 240/462 (51%), Gaps = 8/462 (1%)

Query: 2   GRVSHGFVVLGRILKS-CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G + +   +  R+LK     P+  ++  +I GLC   +  E+  ++ +++      D++T
Sbjct: 233 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 292

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TL++GLC + +   A  +++EMA    E GV   P+ V Y T+++G  + G +++  E
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMA----ENGV--SPDVVVYNTMLNGYLRAGRIEECLE 346

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M+ +  +  VV+Y  +IRG       +EA  ++  + ++    + +T+ V++  LC
Sbjct: 347 LWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG +++A  +L+         D F Y+++++G C  GR++    +   M   GCK    
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
             + +ING+ +  ++E AL  +  M+SKG  P VV +NTL  GL +  +   A+ L  EM
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G   +  TY   ++GLC+   +  A+ L+        + D++ +N +I GLC SG++
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E AL+L+  +     VPN+VT++ ++ G       ++A  ++  + +    P++I++++ 
Sbjct: 586 EDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNIT 645

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++G    +  S  +  L+   +  V+P A   +I+V  +  N
Sbjct: 646 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 167/335 (49%), Gaps = 41/335 (12%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           V++  LI+GL   +++ EA +++  L    C  D  TY  LV+GLC+  +   AL++ EE
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 419

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN---------- 133
             NG G+       +T  Y+++I+GLC+EG +D+   +L QM     KPN          
Sbjct: 420 AENGRGDL------DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVING 473

Query: 134 -------------------------VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
                                    VVTY ++I G   A+ ++EA  L  EM+ +G +PN
Sbjct: 474 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPN 533

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
           ++T++++M+ LC+  K+D A  L    ++ G +PD   +N ++ G C +G+V  A +L+ 
Sbjct: 534 MITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYS 593

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
            M+   C   + +++ L+ G+ K ++ E A  ++  +L  G +PD++ +N    GL   H
Sbjct: 594 EMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCH 653

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           ++  A    ++    GV     T+   +  +  NG
Sbjct: 654 RISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R S  + ++  +L   + P+ +T++ L+ GLC   ++  A  L+ +    G +PDV  + 
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +++GLC +     AL L+ EM          C PN VT+ T+++G  K    ++A ++ 
Sbjct: 574 IIIHGLCSSGKVEDALQLYSEMKQRK------CVPNLVTHNTLMEGFYKVRDFERASKIW 627

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             +     +P++++Y   ++G C     ++A     + +D+GV P  +T+N+++  +  N
Sbjct: 628 DHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687

Query: 183 GKM 185
           G +
Sbjct: 688 GAL 690



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 1/156 (0%)

Query: 314 TFIDGLCKNGYIVEAVELFHTLR-ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
           T I    KN    +A+++F  +  I  C+  IR+YNSL++ L +S + + A   F     
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L PN+ TY+I+I   C   Q DKA++L   M E    P+V ++  LI    +    S 
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
            ++L  +M E  V PD +  +I++D   K    LN+
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNA 238



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 8/185 (4%)

Query: 293 AFKLFDEMQR-NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           A  +FD + R  G +   + +   +  L     +     +   +R  KC+       ++I
Sbjct: 26  ALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVI 85

Query: 352 DGLCKSGRLEIALELFRSLP----CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
               K+   + AL++F+ +     C    P + +Y+ ++  L    + D+A   FL  E 
Sbjct: 86  KAYAKNSMPDQALDIFQRMHEIFGCQ---PGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
             + PN+ T+++LI+   R  +  K  ELL+ M E    PD      +++ LAKN    +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 468 SLPSF 472
           +L  F
Sbjct: 203 ALKLF 207


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 230/445 (51%), Gaps = 32/445 (7%)

Query: 32  GLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF 91
           GL ++ ++M +  LF      G  PDVF+   LV+ LC+     +AL         N + 
Sbjct: 108 GLVSQVKLMYSDMLFC-----GVVPDVFSVNVLVHSLCKVGDLDLALGYLR-----NND- 156

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
             V + + VTY T+I G C++G VD+   LL +M  + +  + +T   +++G+C      
Sbjct: 157 --VVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQ 214

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
            A+ +   ++D GV  +V+  N ++D  C+   M +A+ L++   +  V+ D  TYNTLL
Sbjct: 215 YAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLL 274

Query: 212 DGFCLTGRVNHAKELF-------------------VSMESMGCKHTVFSYSILINGYCKN 252
             FC TG +  A+ LF                      E    + T+ +Y+ LI  YCK 
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
             +E + SLY +M+  GI PDVV  +++  G     ++  A  LF EM   G+  +  +Y
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSY 394

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T I+ L K+G ++EA  L   + +    FDI    +++DGL K G+ + A E+F ++  
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L PN VTYS ++ G C  G+M+ A  +   ME+  V PNVITF  +I G+ +    SK
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSK 514

Query: 433 VIELLHKMKEINVMPDASIVSIVVD 457
            +++L +M + NVMP+  + +I++D
Sbjct: 515 AVDVLREMVQRNVMPNTIVYAILID 539



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 212/406 (52%), Gaps = 7/406 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P  VT+T+LI   C    + E+ +L+ K+ + G  PDV T ++++ G CR      A  L
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL 378

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F EM     E G+  +PN V+Y TII+ L K G V +A  L  QM  + I  ++VT T+V
Sbjct: 379 FREMY----EMGL--DPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTV 432

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G        EA+ +F  ++   + PN VT++ ++D  CK GKM+ A  +L  M +  V
Sbjct: 433 MDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHV 492

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+  T++++++G+   G ++ A ++   M           Y+ILI+GY K  E + A  
Sbjct: 493 PPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADD 552

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
              EM S+ ++   VI + L   L  + +++ A  L  +M   G+  D   Y + IDG  
Sbjct: 553 FCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYF 612

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G  + A+ +   ++     FD+ AYN+LI GL + G+ +      R +  G L P+ +
Sbjct: 613 KEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELG-LAPDCI 671

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           TY+ +I   C  G+ + A D+  +M+   ++PN +T+++LI G  +
Sbjct: 672 TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCK 717



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 230/478 (48%), Gaps = 28/478 (5%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT+ ++I G C +  + +   L +++   G   D  T   LV G CR      A  + 
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             + +G    GV    + +   T+IDG C+   + +A EL+      ++K ++VTY +++
Sbjct: 221 YNLVDG----GVT--KDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLL 274

Query: 142 RGFCYAKDWNEAKRLFIEMMD-------------------QGVQPNVVTFNVIMDELCKN 182
           + FC   D   A+ LF E++                    + +QP +VT+  ++   CK 
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
             ++E+  L   MI +G+ PD  T +++L GFC  G++  A  LF  M  MG      SY
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSY 394

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + +IN   K+  +  A +L S+M+ +GI  D+V   T+  GLF++ + + A ++F+ + +
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
             +A +  TY   +DG CK G +  A  +   +       ++  ++S+I+G  K G L  
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSK 514

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A+++ R +    ++PN + Y+I+I G    G+ D A D   +M+   +  + + FD+L+ 
Sbjct: 515 AVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLN 574

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
              R+    +   L+  M    + PD    + ++D   K     N L + ++ ++ +E
Sbjct: 575 NLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG---NQLAALSIVQEMKE 629



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 239/515 (46%), Gaps = 61/515 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      V   ILK    P+ VT+++L+ G C   ++  A  +  K+      P+V T
Sbjct: 439 VGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVIT 498

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDG------------ 108
           +++++NG  +      A+++  EM   N        PNT+ Y  +IDG            
Sbjct: 499 FSSIINGYAKKGMLSKAVDVLREMVQRN------VMPNTIVYAILIDGYFKAGEQDVADD 552

Query: 109 LCKE-----------------------GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
            CKE                       G +D+A+ L++ M  K I P++V Y S+I G  
Sbjct: 553 FCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG-- 610

Query: 146 YAKDWNEAKRLFI--EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           Y K+ N+   L I  EM ++ ++ +VV +N ++  L + GK D    +   MI+ G+ PD
Sbjct: 611 YFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPD 669

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS--L 261
             TYNT+++ +C+ G+   A ++   M+S G      +Y+ILI G CK   +   ++   
Sbjct: 670 CITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKF 729

Query: 262 YSEMLSKGIKPDVV--IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             +  S+  K D +  IH  L     E+   +R   + DEM + G++AD  TY   I G 
Sbjct: 730 LVKAYSRSEKADKILQIHEKLVASGLEL---KRQKVVLDEMVKRGISADLVTYNALIRGY 786

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG----RLEIALELFRSLPCGVL 375
           C   ++ +A++ +  + +     +I  YN+L+ GL  +G     +E   +L   +    L
Sbjct: 787 CTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGL 846

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           VPN  TY I++ G    G   K   L ++M     VP + T+++LI  + +  +  +  E
Sbjct: 847 VPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARE 906

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
           LL+ +     +P+    S   D+L    ++L+  P
Sbjct: 907 LLNDLLTKGRIPN----SFTYDILTCGWLNLSYEP 937



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 226/498 (45%), Gaps = 73/498 (14%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++    +VL ++ K    P+ +TF+S+I G   +  + +A  +  ++      P+   
Sbjct: 474 LGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIV 533

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGE-----------------------------F 91
           Y  L++G  +     VA +  +EM +   E                             +
Sbjct: 534 YAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMY 593

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
               +P+ V Y ++IDG  KEG    A  ++ +MK+KNI+ +VV Y ++I+G      + 
Sbjct: 594 SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY- 652

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           + + +   M++ G+ P+ +T+N I++  C  GK ++A  +L+ M  +G+ P+A TYN L+
Sbjct: 653 DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILI 712

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY--------- 262
            G C TG V                 T  ++  L+  Y ++++ +  L ++         
Sbjct: 713 GGLCKTGFV----------------PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLE 756

Query: 263 --------SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
                    EM+ +GI  D+V +N L  G      VE+A K + +M  +G+A +  TY T
Sbjct: 757 LKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNT 816

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRA-------YNSLIDGLCKSGRLEIALELF 367
            + GL   G + E +E       L  E + R        Y+ L+ G  + G  +  + L 
Sbjct: 817 LLGGLSNAGLMEEMMEETEK---LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILH 873

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
             +     VP + TY+++I      G+M +AR+L  D+     +PN  T+D+L  G++ +
Sbjct: 874 IEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNL 933

Query: 428 NEPSKVIELLHKMKEINV 445
           +   ++   L +  EI V
Sbjct: 934 SYEPEIDRSLKRSYEIEV 951



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 162/357 (45%), Gaps = 21/357 (5%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M+   + P +  + +++  F  +   ++ K ++ +M+  GV P+V + NV++  LCK G
Sbjct: 84  HMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVG 143

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            +D A  L  L     V  D  TYNT++ GFC  G V+    L   M   G      + +
Sbjct: 144 DLDLA--LGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCN 201

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           IL+ GYC+   ++ A  +   ++  G+  DV+  NTL  G  E   + +A +L +   R+
Sbjct: 202 ILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRS 261

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-------------------RILKCEFDI 344
            V  D  TY T +   CK G +  A  LF+ +                    I   +  +
Sbjct: 262 DVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTL 321

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y +LI   CK   +E +  L++ +    ++P+VVT S ++ G C  G++ +A  LF +
Sbjct: 322 VTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFRE 381

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           M E  + PN +++  +I    +     +   L  +M    +  D    + V+D L K
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK 438



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 134/331 (40%), Gaps = 52/331 (15%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           +   AS     M   G+ P    +NTLL  F  +G V+  K ++  M   G    VFS +
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVN 133

Query: 244 ILIN---------------------------------GYCKNKEIEGALSLYSEMLSKGI 270
           +L++                                 G+C+   ++    L SEM+ +G+
Sbjct: 134 VLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGL 193

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
             D +  N L  G   I  V+ A  +   +   GV  D     T IDG C+   + +A E
Sbjct: 194 CFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATE 253

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL-------------------P 371
           L         + DI  YN+L+   CK+G L  A  LF  +                    
Sbjct: 254 LIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNE 313

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              L P +VTY+ +I   C    ++++  L+  M  N ++P+V+T   ++ GF R  + +
Sbjct: 314 IKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLT 373

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +   L  +M E+ + P+    + +++ L K+
Sbjct: 374 EAAVLFREMYEMGLDPNHVSYATIINSLFKS 404


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 237/506 (46%), Gaps = 68/506 (13%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            P   TF  LI+ LC  S +  A  LF ++   GC+P+ FT+  LV G C+   T   L 
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L   M +    FGV+  PN V Y TI+   C+EG  D +++++ +M+++ + P++VT+ S
Sbjct: 204 LLNAMES----FGVL--PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257

Query: 140 VIRGFCYAKDWNEAKRLFIEM-MDQGV---QPNVVTFNVIMDELCK-------------- 181
            I   C      +A R+F +M +D+ +   +PN +T+N+++   CK              
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317

Query: 182 ---------------------NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
                                +GK  EA  +L  M   G+ P  ++YN L+DG C  G +
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + AK +   M+  G      +Y  L++GYC   +++ A SL  EM+     P+    N L
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL-- 338
              L+++ ++  A +L  +M   G   DT T    +DGLC +G + +A+E+   +R+   
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497

Query: 339 ---------------------KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
                                 C  D+  Y++L++GLCK+GR   A  LF  +    L P
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           + V Y+I I   C  G++  A  +  DME+     ++ T++ LI G    N+  ++  L+
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNE 463
            +MKE  + P+    +  +  L + E
Sbjct: 618 DEMKEKGISPNICTYNTAIQYLCEGE 643



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 242/529 (45%), Gaps = 76/529 (14%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    +  L++    E R+   + L+  + + G  P  +T+  L+  LC +S    A  L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+EM          C+PN  T+  ++ G CK G  DK  ELL  M+   + PN V Y ++
Sbjct: 170 FDEMPEKG------CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHG 199
           +  FC     ++++++  +M ++G+ P++VTFN  +  LCK GK+ +ASR+  D+ +   
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283

Query: 200 V---RPDAFTYNTLLDGFCLTGRVNHAKELFVS--------------------------- 229
           +   RP++ TYN +L GFC  G +  AK LF S                           
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343

Query: 230 --------MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
                   M   G   +++SY+IL++G CK   +  A ++   M   G+ PD V +  L 
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G   + +V+ A  L  EM RN    + +T    +  L K G I EA EL   +      
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFR------SLPCGVL-----------------VPN 378
            D    N ++DGLC SG L+ A+E+ +      S   G L                 +P+
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           ++TYS ++ GLC  G+  +A++LF +M    + P+ + +++ I  F +  + S    +L 
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583

Query: 439 KMKEINVMPD-ASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNV 486
            M++        +  S+++ L  KN+I       F +H   +E+ E  +
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQI-------FEIHGLMDEMKEKGI 625



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 231/483 (47%), Gaps = 25/483 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    G  +L  +      P+ V + +++   C E R  ++  +  K+R  G  PD+ T+
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTF 255

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            + ++ LC+    + A  +F +M     E+  +  PN++TY  ++ G CK G ++ AK L
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELD--EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +++ +   ++ +Y   ++G      + EA+ +  +M D+G+ P++ ++N++MD LCK
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A  ++ LM ++GV PDA TY  LL G+C  G+V+ AK L   M    C    ++
Sbjct: 374 LGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            +IL++   K   I  A  L  +M  KG   D V  N +  GL    ++++A ++   M+
Sbjct: 434 CNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493

Query: 302 RNGVAA-----------------------DTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            +G AA                       D  TY T ++GLCK G   EA  LF  +   
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
           K + D  AYN  I   CK G++  A  + + +       ++ TY+ +I GL    Q+ + 
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI 613

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
             L  +M+E  + PN+ T++  I+      +      LL +M + N+ P+      +++ 
Sbjct: 614 HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673

Query: 459 LAK 461
             K
Sbjct: 674 FCK 676



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 212/465 (45%), Gaps = 40/465 (8%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR-----TSHTIVALN 79
           ++   ++GL    + +EA  +  ++   G  P +++Y  L++GLC+      + TIV L 
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL- 386

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
                   NG    VC P+ VTY  ++ G C  G VD AK LL +M   N  PN  T   
Sbjct: 387 -----MKRNG----VC-PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL------- 192
           ++         +EA+ L  +M ++G   + VT N+I+D LC +G++D+A  ++       
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496

Query: 193 ----------------DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
                           D +I++   PD  TY+TLL+G C  GR   AK LF  M     +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               +Y+I I+ +CK  +I  A  +  +M  KG    +  +N+L +GL   +Q+     L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            DEM+  G++ +  TY T I  LC+   + +A  L   +       ++ ++  LI+  CK
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
               ++A E+F +    +       YS+M   L   GQ+ KA +L   + +         
Sbjct: 677 VPDFDMAQEVFET-AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFL 735

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  L+    + +E      +LHKM +     D + +  V+D L K
Sbjct: 736 YKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGK 780



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 185/391 (47%), Gaps = 40/391 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +S    ++G + ++   PDAVT+  L+ G C+  ++  A +L  ++    C P+ +T
Sbjct: 374 LGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
              L++ L +      A  L  +M N  G +G+    +TVT   I+DGLC  G +DKA E
Sbjct: 434 CNILLHSLWKMGRISEAEELLRKM-NEKG-YGL----DTVTCNIIVDGLCGSGELDKAIE 487

Query: 121 LLLQMK-----------------------DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           ++  M+                       + N  P+++TY++++ G C A  + EAK LF
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EMM + +QP+ V +N+ +   CK GK+  A R+L  M + G      TYN+L+ G  + 
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
            ++     L   M+  G    + +Y+  I   C+ +++E A +L  EM+ K I P+V   
Sbjct: 608 NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSF 667

Query: 278 NTLFVGLFEIHQVERAFKLFDEM-----QRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
             L     ++   + A ++F+       Q+ G+      Y    + L   G +++A EL 
Sbjct: 668 KYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATELL 721

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
             +     E     Y  L++ LCK   LE+A
Sbjct: 722 EAVLDRGFELGTFLYKDLVESLCKKDELEVA 752



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 208/470 (44%), Gaps = 35/470 (7%)

Query: 2   GRVSHG-FV----VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 56
           G V HG F+    VL ++      P   ++  L+ GLC    + +A  +   ++  G  P
Sbjct: 335 GLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCP 394

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D  TY  L++G C       A +L +EM   N      C PN  T   ++  L K G + 
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN------CLPNAYTCNILLHSLWKMGRIS 448

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL------------------FI 158
           +A+ELL +M +K    + VT   ++ G C + + ++A  +                  +I
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508

Query: 159 EMMDQGV-----QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            ++D  +      P+++T++ +++ LCK G+  EA  L   M+   ++PD+  YN  +  
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHH 568

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           FC  G+++ A  +   ME  GC  ++ +Y+ LI G     +I     L  EM  KGI P+
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           +  +NT    L E  +VE A  L DEM +  +A + ++++  I+  CK      A E+F 
Sbjct: 629 ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
           T  +  C      Y+ + + L  +G+L  A EL  ++           Y  ++  LC   
Sbjct: 689 T-AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKD 747

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           +++ A  +   M +     +      +I G  ++    +      KM E+
Sbjct: 748 ELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEM 797



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 160/335 (47%), Gaps = 39/335 (11%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +P+V  +N++++   K  +++  S L   M+  G+ P  +T+N L+   C +  V+ A+E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           LF  M   GCK   F++ IL+ GYCK    +  L L + M S G+ P+ VI+NT+     
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              + + + K+ ++M+  G+  D  T+ + I  LCK G +++A  +F  + + +     R
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 346 ----AYNSLIDGLCKSGRLEIALELFRSL--------------------PCGVLV----- 376
                YN ++ G CK G LE A  LF S+                      G  +     
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 377 ----------PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
                     P++ +Y+I++ GLC  G +  A+ +   M+ N V P+ +T+  L+ G+  
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + +      LL +M   N +P+A   +I++  L K
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 207/401 (51%), Gaps = 6/401 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD   + ++I  LC    ++EA  L   +R +G  PD   YTT+++G C+  +   A  L
Sbjct: 310 PDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKL 369

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+EM            P+ VTYT++I G+CK G + +A+E+  +M  K ++P+ VTYT++
Sbjct: 370 FDEMRRKK------IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G+C A +  EA  +  +M+ +G+ PNVVT+  + D LCKNG++D A+ LL  M + G+
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL 483

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P+ +TYNT+++G C  G +    +L   M+  G      +Y+ L++ YCK  E+  A  
Sbjct: 484 QPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHE 543

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L   ML+K ++P +V  N L  G      +E   +L + M   G+  +  T+ + +   C
Sbjct: 544 LLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYC 603

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
               +    E++  +       D   YN LI G CK+  ++ A  L + +          
Sbjct: 604 IKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAA 663

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           TY  +I G     +  +AR LF +M ++ +V     +D+ +
Sbjct: 664 TYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 229/461 (49%), Gaps = 41/461 (8%)

Query: 33  LCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFG 92
           LC   ++ EA  L  ++   G  PDV +Y  +V+G CR       L L +E+  G G   
Sbjct: 252 LCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL-KGKG--- 307

Query: 93  VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
              +P+   Y  II  LCK G V +A++LL  M+   + P+ V YT+VI GFC   + + 
Sbjct: 308 --LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A +LF EM  + + P++VT+  ++  +CK+GKM EA  + + M+  G+ PD  TY  L+D
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C  G +  A  +   M   G    V +Y+ L +G CKN EI+ A  L  EM  KG++P
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQP 485

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +V  +NT+  GL +I  +E+  KL +EM   G   DT TY T +D  CK G + +A EL 
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLE------------------------------- 361
             +   + +  +  +N L++G C SG LE                               
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605

Query: 362 ----IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
                  E+++++    ++P+  TY+I+I G C    M +A  L  +M E        T+
Sbjct: 606 NNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATY 665

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
           D LIRGF +  +  +  +L  +M++  ++ +  I  I VD+
Sbjct: 666 DALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDV 706



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 186/368 (50%), Gaps = 10/368 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G VS    +   + +    PD VT+TS+I G+C   +++EA  +F ++ V G EPD  T
Sbjct: 360 LGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVT 419

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L++G C+      A ++  +M            PN VTYT + DGLCK G +D A E
Sbjct: 420 YTALIDGYCKAGEMKEAFSVHNQMVQKG------LTPNVVTYTALADGLCKNGEIDVANE 473

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  K ++PNV TY +++ G C   +  +  +L  EM   G  P+ +T+  +MD  C
Sbjct: 474 LLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M +A  LL +M+   ++P   T+N L++GFC++G +   + L   M   G      
Sbjct: 534 KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNAT 593

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++ L+  YC    +     +Y  M  +G+ PD   +N L  G  +   ++ A+ L  EM
Sbjct: 594 TFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 653

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI--LKCEFDIRAYNSLIDGLCKSG 358
              G +    TY   I G  K    VEA +LF  +R   L  E DI  Y+  +D   + G
Sbjct: 654 VEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDI--YDIFVDVNYEEG 711

Query: 359 RLEIALEL 366
             EI LEL
Sbjct: 712 NWEITLEL 719



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 224/454 (49%), Gaps = 42/454 (9%)

Query: 39  IMEAAALFTKLRVFGCEPDVFTYTTLVNGL-CRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           ++EA  LF KL  +G    V +    ++ L C      +A+ +FEE      E GV    
Sbjct: 187 VLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFP----ELGVCW-- 240

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKD------------------------------ 127
           NTV+   ++  LC+ G V +A  LL+QM D                              
Sbjct: 241 NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLV 300

Query: 128 -----KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
                K +KP+   Y ++I   C   +  EA++L   M   GV P+ V +  ++   CK 
Sbjct: 301 DELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKL 360

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +  A +L D M +  + PD  TY +++ G C +G++  A+E+F  M   G +    +Y
Sbjct: 361 GNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI+GYCK  E++ A S++++M+ KG+ P+VV +  L  GL +  +++ A +L  EM R
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR 480

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G+  + +TY T ++GLCK G I + V+L   + +     D   Y +L+D  CK G +  
Sbjct: 481 KGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAK 540

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A EL R +    L P +VT+++++ G C  G ++    L   M E  ++PN  TF+ L++
Sbjct: 541 AHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMK 600

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +   N      E+   M +  VMPD++  +I++
Sbjct: 601 QYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILI 634



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 167/309 (54%)

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A ++F E  + GV  N V+ N+++  LC+ GK+ EA  LL  M   G  PD  +Y  ++ 
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+C  G ++   +L   ++  G K   + Y+ +I   CKN E+  A  L   M   G+ P
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D V++ T+  G  ++  V  A KLFDEM+R  +  D  TY + I G+CK+G +VEA E+F
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
           + + +   E D   Y +LIDG CK+G ++ A  +   +    L PNVVTY+ +  GLC +
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G++D A +L  +M    + PNV T++ ++ G  +I    + ++L+ +M      PD    
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525

Query: 453 SIVVDLLAK 461
           + ++D   K
Sbjct: 526 TTLMDAYCK 534



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 6/298 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F V  ++++   TP+ VT+T+L  GLC    I  A  L  ++   G +P+V+TY
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+VNGLC+  +    + L EEM +  G +     P+T+TYTT++D  CK G + KA EL
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEM-DLAGFY-----PDTITYTTLMDAYCKMGEMAKAHEL 544

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +K ++P +VT+  ++ GFC +    + +RL   M+++G+ PN  TFN +M + C 
Sbjct: 545 LRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCI 604

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              M   + +   M   GV PD+ TYN L+ G C    +  A  L   M   G   T  +
Sbjct: 605 KNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAAT 664

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           Y  LI G+ K K+   A  L+ EM   G+  +  I++      +E    E   +L DE
Sbjct: 665 YDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 170/338 (50%), Gaps = 10/338 (2%)

Query: 133 NVVTYTSVIRGFCYAK--DWNEAKRLFIEMM-----DQGVQPNVVTFNVIMDELCKNGKM 185
           ++ T   ++  FC     D +++  LF EM+     D G  P  + F++    L +NG +
Sbjct: 130 DIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHP--LVFDLYFQVLVENGFV 187

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGF-CLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
            EA +L   ++++GV     + N  L    C    +  A ++F     +G      S +I
Sbjct: 188 LEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNI 247

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +++  C+  ++  A +L  +M  +G  PDVV +  +  G   I ++++  KL DE++  G
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKG 307

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D + Y   I  LCKNG +VEA +L   +R      D   Y ++I G CK G +  A 
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAAC 367

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           +LF  +    +VP++VTY+ +I G+C  G+M +AR++F +M    + P+ +T+  LI G+
Sbjct: 368 KLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGY 427

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +  E  +   + ++M +  + P+    + + D L KN
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465


>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 583

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 224/446 (50%), Gaps = 17/446 (3%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC T  A   T L+  L  + +  EA A+F  L   G +P + TYTTLV  L R      
Sbjct: 18  SCQTVHA--RTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKS 75

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
              L  ++A+ NG      +P+++    +I+   + G VD+A ++  +MK+   KP   T
Sbjct: 76  IPALLSKVAD-NG-----MKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTST 129

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMM--DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           Y ++I+GF  A    E+ +L +EMM  D+ V+PN  T+N+++   C   K++EA  +L  
Sbjct: 130 YNTLIKGFGIAGRPYESMKL-LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHK 188

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+  G++PD  TYNT+   +   G    A+ L + M     K    +  I+I+GYCK   
Sbjct: 189 MVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGN 248

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLF---EIHQVERAFKLFDEMQRNGVAADTWT 311
           +  AL     M   G+ P+ V+ N+L  G     + + V+ A  L +E    G+  D  T
Sbjct: 249 MPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEF---GIKPDVVT 305

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           + T ++     G +    E+F+ +     E DI AY+ L  G  ++G+   A  L  S+ 
Sbjct: 306 FSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMS 365

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + PNVV ++ +I G C  G+MD+A  L   M E    PN+ T++ LI G+    +P 
Sbjct: 366 KYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPW 425

Query: 432 KVIELLHKMKEINVMPDASIVSIVVD 457
           K  ELL  M+E  V+P+ S + +V D
Sbjct: 426 KAEELLTTMEERGVVPEMSTMQLVAD 451



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 203/430 (47%), Gaps = 13/430 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   + +    P  +T+T+L+  L  + R     AL +K+   G +PD    
Sbjct: 36  GKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILL 95

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N    +     A+ +F++M     E+G  C+P T TY T+I G    G   ++ +L
Sbjct: 96  NAMINAFSESGKVDEAMKIFQKMK----EYG--CKPTTSTYNTLIKGFGIAGRPYESMKL 149

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  M +D+N+KPN  TY  +I+ +C  K   EA  +  +M+  G+QP+VVT+N +     
Sbjct: 150 LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYA 209

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +NG+ + A RL+  M  + V+P+  T   ++ G+C  G +  A      M+ +G      
Sbjct: 210 QNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPV 269

Query: 241 SYSILINGYCKNKEIEG---ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            ++ LI GY    +  G   AL+L  E    GIKPDVV  +T+         +E   ++F
Sbjct: 270 VFNSLIKGYLDTTDTNGVDEALTLMEEF---GIKPDVVTFSTIMNAWSSAGLMENCEEIF 326

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           ++M + G+  D   Y     G  + G   +A  L  ++     + ++  + ++I G C +
Sbjct: 327 NDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAA 386

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           G+++ A  L   +      PN+ TY  +I G     Q  KA +L   MEE  VVP + T 
Sbjct: 387 GKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTM 446

Query: 418 DMLIRGFIRI 427
            ++   +  I
Sbjct: 447 QLVADAWRAI 456



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 186/401 (46%), Gaps = 5/401 (1%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
            +L ++  +   PD++   ++I       ++ EA  +F K++ +GC+P   TY TL+ G 
Sbjct: 78  ALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGF 137

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
                   ++ L E M           +PN  TY  +I   C +  +++A  +L +M   
Sbjct: 138 GIAGRPYESMKLLEMMGQDEN-----VKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVAS 192

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            I+P+VVTY ++ R +    +   A+RL ++M    V+PN  T  +I+   CK G M EA
Sbjct: 193 GIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEA 252

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            R L  M + GV P+   +N+L+ G+  T   N   E    ME  G K  V ++S ++N 
Sbjct: 253 LRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNA 312

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           +     +E    ++++M+  GI+PD+  ++ L  G     Q  +A  L   M + GV  +
Sbjct: 313 WSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPN 372

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
              + T I G C  G +  A  L   +  +    +++ Y +LI G  ++ +   A EL  
Sbjct: 373 VVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLT 432

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           ++    +VP + T  ++       G   +A  +    EE +
Sbjct: 433 TMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNGSEEES 473


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 204/382 (53%), Gaps = 6/382 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD  T   L+   C   +   A +   K+   G EPD+ T ++LVNG C ++    A+ 
Sbjct: 45  SPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVY 104

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  +M     + G+  + + V  T +ID LCK   V  A E+L +MKD+ I PNVVTY+S
Sbjct: 105 VAGQME----KMGI--KRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 158

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C +    +A+R   EM  + + PNV+TF+ ++D   K GK+ +   +  +MIQ  
Sbjct: 159 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 218

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+ FTY++L+ G C+  RV+ A ++   M S GC   V +YS L NG+ K+  ++  +
Sbjct: 219 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 278

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  +M  +G+  + V  NTL  G F+  +++ A  +F  M  NG+  +  +Y   + GL
Sbjct: 279 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 338

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
             NG + +A+  F  ++  + + DI  Y  +I G+CK+  ++ A +LF  L    + P+ 
Sbjct: 339 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 398

Query: 380 VTYSIMIGGLCNDGQMDKARDL 401
             Y+IMI  L   G   +A  L
Sbjct: 399 KAYTIMIAELNRAGMRTEADAL 420



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 190/354 (53%), Gaps = 6/354 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           S     LG+++K    PD VT +SL+ G C  + I +A  +  ++   G + DV   T L
Sbjct: 65  SSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL 124

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           ++ LC+    + AL + + M +          PN VTY+++I GLCK G +  A+  L +
Sbjct: 125 IDTLCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLCKSGRLADAERRLHE 178

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M  K I PNV+T++++I  +      ++   ++  M+   + PNV T++ ++  LC + +
Sbjct: 179 MDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNR 238

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +DEA ++LDLMI  G  P+  TY+TL +GF  + RV+   +L   M   G      S + 
Sbjct: 239 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 298

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI GY +  +I+ AL ++  M S G+ P++  +N +  GLF   +VE+A   F+ MQ+  
Sbjct: 299 LIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTR 358

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
              D  TY   I G+CK   + EA +LF+ L+  + E D +AY  +I  L ++G
Sbjct: 359 NDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 412



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 206/401 (51%), Gaps = 3/401 (0%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P +  +  ++  + +     V +NL++ + N  G   +   P+  T   +++  C+    
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEG---IEISPDLYTCNILVNCFCRCFQP 64

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             A   L +M    I+P++VT +S++ GFC +    +A  +  +M   G++ +VV   ++
Sbjct: 65  SSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL 124

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +D LCKN  +  A  +L  M   G+ P+  TY++L+ G C +GR+  A+     M+S   
Sbjct: 125 IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 184

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V ++S LI+ Y K  ++    S+Y  M+   I P+V  +++L  GL   ++V+ A K
Sbjct: 185 NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 244

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           + D M   G   +  TY T  +G  K+  + + ++L   +       +  + N+LI G  
Sbjct: 245 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 304

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           ++G++++AL +F  +    L+PN+ +Y+I++ GL  +G+++KA   F  M++     ++I
Sbjct: 305 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 364

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           T+ ++I G  +     +  +L +K+K   V PD    +I++
Sbjct: 365 TYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 405



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 6/328 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           +     V G++ K     D V  T LI  LC    ++ A  +  +++  G  P+V TY++
Sbjct: 99  IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 158

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+ GLC++     A     EM +          PN +T++ +ID   K G + K   +  
Sbjct: 159 LITGLCKSGRLADAERRLHEMDSKK------INPNVITFSALIDAYAKRGKLSKVDSVYK 212

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M   +I PNV TY+S+I G C     +EA ++   M+ +G  PNVVT++ + +   K+ 
Sbjct: 213 MMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSS 272

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++D+  +LLD M Q GV  +  + NTL+ G+   G+++ A  +F  M S G    + SY+
Sbjct: 273 RVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYN 332

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I++ G   N E+E ALS +  M       D++ +  +  G+ +   V+ A+ LF +++  
Sbjct: 333 IVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFK 392

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVEL 331
            V  D   Y   I  L + G   EA  L
Sbjct: 393 RVEPDFKAYTIMIAELNRAGMRTEADAL 420



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 174/354 (49%), Gaps = 4/354 (1%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQ--PNVVTFNVIMDELCKNGKMDEA 188
           P++V +  V+      + ++    L+  + + +G++  P++ T N++++  C+  +   A
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
              L  M++ G+ PD  T ++L++GFCL+  +  A  +   ME MG K  V   +ILI+ 
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            CKN+ +  AL +   M  +GI P+VV +++L  GL +  ++  A +   EM    +  +
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 187

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             T+   ID   K G + +   ++  +  +  + ++  Y+SLI GLC   R++ A+++  
Sbjct: 188 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 247

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +      PNVVTYS +  G     ++D    L  DM +  V  N ++ + LI+G+ +  
Sbjct: 248 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 307

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
           +    + +   M    ++P+    +IV+  L  N     +L  F  H Q+   D
Sbjct: 308 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE-HMQKTRND 360



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 29/226 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    V   +++    P+  T++SLI GLC  +R+ EA  +   +   GC P+V TY
Sbjct: 202 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 261

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGN-------------------------GEFGVVCE 96
           +TL NG  ++S     + L ++M                             G FG +  
Sbjct: 262 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS 321

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN  +Y  ++ GL   G V+KA      M+      +++TYT +I G C A    E
Sbjct: 322 NGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKE 381

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           A  LF ++  + V+P+   + +++ EL + G   EA  L     +H
Sbjct: 382 AYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKH 427


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 215/411 (52%), Gaps = 20/411 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+   +T  I+ LC E+++ EA  +F  +++ G  P+++TY+ +++G C+T +   A  L
Sbjct: 266 PNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGL 325

Query: 81  FEEMANGNGEFGVVCE--PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++E+        +V E  PN V + T++DG CK   +  A+ L + M    + PN+  Y 
Sbjct: 326 YKEI--------LVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYN 377

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G C + +  EA  L  EM    + P+V T+ ++++ LC   ++ EA+RL   M   
Sbjct: 378 CLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNE 437

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            + P + TYN+L+ GFC    +  A +L   M S G +  + ++S LI+GYCK + I+ A
Sbjct: 438 RIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAA 497

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           + LY EM  KGI PDVV + TL    F+   ++ A +L+ +M   G+  +  T+   +DG
Sbjct: 498 MGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 557

Query: 319 LCKNGYIVEAVELF---------HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             K G + +A++ +          ++    C +    +  LI+GLC++G +  A   F  
Sbjct: 558 FWKEGRLSDAIDFYLENNQAATGKSIVQRSC-WKYVGFTCLIEGLCQNGYILRASRFFSD 616

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +  G + P++ +Y  M+     + ++     L  DM +  ++PN++   +L
Sbjct: 617 MKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLL 667



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 224/450 (49%), Gaps = 14/450 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD   ++ L +    +    +   L  ++   G +P+V+ YT  +  LCR +    A  +
Sbjct: 231 PDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKM 290

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FE M       GVV  PN  TY+ +IDG CK G + +A  L  ++    + PNVV + ++
Sbjct: 291 FELMKIH----GVV--PNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTL 344

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GFC A++   A+ LF+ M+  GV PN+  +N ++   CK+G M EA  LL  M    +
Sbjct: 345 VDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNL 404

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD FTY  L++G C   R+  A  LF  M++     +  +Y+ LI+G+CK   IE AL 
Sbjct: 405 SPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALD 464

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L SEM S G++P+++  +TL  G  ++  ++ A  L+ EM   G+  D  TY T ID   
Sbjct: 465 LCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHF 524

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + EA+ L+  +       +   +  L+DG  K GRL  A++ +          ++V
Sbjct: 525 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIV 584

Query: 381 T--------YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
                    ++ +I GLC +G + +A   F DM+   V P++ ++  +++  +R    + 
Sbjct: 585 QRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITD 644

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + L   M +  ++P+  +  ++     +N
Sbjct: 645 TMMLHCDMIKTGILPNLMVNQLLAMFYQEN 674



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 218/455 (47%), Gaps = 15/455 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD+    +++ GL    R       +  +   G  PDV  Y+ L     +         
Sbjct: 195 SPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEK 254

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +EM +     GV  +PN   YT  I  LC+E  +++A+++   MK   + PN+ TY++
Sbjct: 255 LLDEMTS----LGV--KPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSA 308

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G+C   +  +A  L+ E++   + PNVV F  ++D  CK  ++  A  L   M++ G
Sbjct: 309 MIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFG 368

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           V P+ + YN L+ G C +G +  A  L   MES+     VF+Y+ILING C  + +  A 
Sbjct: 369 VDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEAN 428

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  M ++ I P  V +N+L  G  + + +E+A  L  EM  +GV  +  T+ T IDG 
Sbjct: 429 RLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGY 488

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK   I  A+ L+  + I     D+  Y +LID   K   ++ AL L+  +    + PN 
Sbjct: 489 CKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPND 548

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT--------FDMLIRGFIRINEPS 431
            T++ ++ G   +G++  A D +L+  + A   +++         F  LI G  +     
Sbjct: 549 HTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYIL 608

Query: 432 KVIELLHKMKEINVMPD-ASIVSIVVDLLAKNEIS 465
           +       MK   V PD  S VS++   L +  I+
Sbjct: 609 RASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRIT 643



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 192/387 (49%), Gaps = 6/387 (1%)

Query: 50  RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGL 109
           R   C PD      ++NGL R          ++ M +     G+V  P+   Y+ +    
Sbjct: 190 REMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISR----GLV--PDVHIYSVLFQCC 243

Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
            K+GF  K ++LL +M    +KPNV  YT  IR  C      EA+++F  M   GV PN+
Sbjct: 244 FKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNL 303

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
            T++ ++D  CK G + +A  L   ++   + P+   + TL+DGFC    +  A+ LFV 
Sbjct: 304 YTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVH 363

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M   G    ++ Y+ LI+G CK+  +  A+ L SEM S  + PDV  +  L  GL    +
Sbjct: 364 MVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEER 423

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           +  A +LF  M+   +   + TY + I G CK   I +A++L   +     E +I  +++
Sbjct: 424 LAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFST 483

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LIDG CK   ++ A+ L+  +    +VP+VVTY+ +I     +  M +A  L+ DM E  
Sbjct: 484 LIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAG 543

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIEL 436
           + PN  TF  L+ GF +    S  I+ 
Sbjct: 544 IHPNDHTFACLVDGFWKEGRLSDAIDF 570



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 163/338 (48%), Gaps = 14/338 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   + +   IL +   P+ V F +L+ G C    ++ A +LF  +  FG +P+++ Y
Sbjct: 317 GNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVY 376

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C++ + + A+ L  EM + N        P+  TYT +I+GLC E  + +A  L
Sbjct: 377 NCLIHGQCKSGNMLEAMGLLSEMESLN------LSPDVFTYTILINGLCTEERLAEANRL 430

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK++ I P+ VTY S+I GFC   +  +A  L  EM   GV+PN++TF+ ++D  CK
Sbjct: 431 FQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCK 490

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
              +  A  L   M   G+ PD  TY TL+D       +  A  L+  M   G      +
Sbjct: 491 VRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 550

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN--------TLFVGLFEIHQVERA 293
           ++ L++G+ K   +  A+  Y E         +V  +         L  GL +   + RA
Sbjct: 551 FACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRA 610

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
            + F +M+  GV  D W+Y + +    +   I + + L
Sbjct: 611 SRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMML 648



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 124/282 (43%), Gaps = 49/282 (17%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD  T+T LI GLC E R+ EA  LF +++     P   TY +L++G C+  +   AL+
Sbjct: 405 SPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALD 464

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L  EM +     GV  EPN +T++T+IDG CK   +  A  L  +M  K I P+VVTYT+
Sbjct: 465 LCSEMTSS----GV--EPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTT 518

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPN------------------------------- 168
           +I       +  EA RL+ +M++ G+ PN                               
Sbjct: 519 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAA 578

Query: 169 ------------VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
                        V F  +++ LC+NG +  ASR    M   GV PD ++Y ++L     
Sbjct: 579 TGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLR 638

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
             R+     L   M   G    +    +L   Y +N  +  A
Sbjct: 639 EKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSA 680


>gi|218194640|gb|EEC77067.1| hypothetical protein OsI_15461 [Oryza sativa Indica Group]
          Length = 548

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 213/406 (52%), Gaps = 13/406 (3%)

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
           +F  + +   LCR   ++ ++        G GE            T  +D L      D 
Sbjct: 128 MFRVSDVATKLCRRHRSLGSVK------GGAGETARTVRRKPTVGTGRLDRL------DD 175

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF-NVIM 176
           A E    M D  +  +   Y  +I+G C   D  +AK L  +M+ +G+ P  + F   I+
Sbjct: 176 AMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPPCIKFFTSII 235

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           + LCK G++ E   ++DL+I  G RP+  T+N+L+DG+CL G +  A  L  SMES+G +
Sbjct: 236 NNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVE 295

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             +++Y+ L++GYCK+  I+ AL+L+ +ML K +    V +N +  GLF+  +   A ++
Sbjct: 296 PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKEM 355

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F EM  +G+A    TY T + GLC+N    EA  L   L  +  +FDI  +N +I  + K
Sbjct: 356 FHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 415

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            GR++ A ELF ++    LVP ++TY +MI  L  +   + A +LF  ME++   P+   
Sbjct: 416 VGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCI 475

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            + +IR  +   E +K    L K+ +  ++P+A+  S+++ L + N
Sbjct: 476 LNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVN 521



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 150/307 (48%), Gaps = 6/307 (1%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           FTS+I  LC E R+ E   +   +   G  P++ T+ +LV+G C   +   A+ L + M 
Sbjct: 231 FTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSME 290

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
           +      V  EP+  TY T++DG CK G +D A  L   M  K +    V+Y  ++ G  
Sbjct: 291 S------VGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLF 344

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            A+    AK +F EM++ G+  ++ T+  ++  LC+N   DEA+ LL+ +    V+ D  
Sbjct: 345 QARRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDIL 404

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T+N ++      GR+  AKELF ++ + G   T+ +Y ++I    K +  E A +L+S M
Sbjct: 405 TFNIVIRAMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSM 464

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
              G  PD  I N +   L    ++ +A     ++ + G+  +  T    I     NG  
Sbjct: 465 EKSGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVNGKY 524

Query: 326 VEAVELF 332
            E ++L 
Sbjct: 525 REYIKLL 531



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 165/349 (47%), Gaps = 5/349 (1%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           R+ +A   F  +   G   D   Y  L+ G C     + A  L  +M +       +  P
Sbjct: 172 RLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKG-----IPPP 226

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
               +T+II+ LCKEG V + K+++  +     +PN++T+ S++ G+C   +  EA  L 
Sbjct: 227 CIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLL 286

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M   GV+P++ T+N ++D  CK+G++D+A  L   M+   V   + +YN +L G    
Sbjct: 287 DSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 346

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
            R   AKE+F  M   G   ++ +Y+ ++ G C+N   + A  L  ++ S  +K D++  
Sbjct: 347 RRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTF 406

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N +   +F++ +++ A +LF  +   G+     TYR  I  L K     +A  LF ++  
Sbjct: 407 NIVIRAMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEK 466

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
             C  D    N +I  L   G +  A      +    ++P   T S++I
Sbjct: 467 SGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLI 515



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 8/302 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV+ G  ++  I+ +   P+ +TF SL+ G C    + EA  L   +   G EPD++TY
Sbjct: 242 GRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 301

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLV+G C+      AL LF +M +            +V+Y  I+ GL +      AKE+
Sbjct: 302 NTLVDGYCKHGRIDDALTLFRDMLHKRVTL------TSVSYNIILHGLFQARRTVVAKEM 355

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +  +  ++ TY +V+ G C     +EA  L  ++    V+ +++TFN+++  + K
Sbjct: 356 FHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 415

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+M EA  L   +  +G+ P   TY  ++           A  LF SME  GC      
Sbjct: 416 VGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCI 475

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF-KLFDEM 300
            + +I       EI  A    S++  KGI P+     +L + LF ++   R + KL  E 
Sbjct: 476 LNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATT-TSLLIYLFSVNGKYREYIKLLPEK 534

Query: 301 QR 302
            R
Sbjct: 535 YR 536



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 135/281 (48%), Gaps = 1/281 (0%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY- 242
           ++D+A      MI  GV  D   Y  L+ G C  G +  AKEL   M S G       + 
Sbjct: 172 RLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPPCIKFF 231

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + +IN  CK   +     +   ++  G +P+++  N+L  G   +  ++ A  L D M+ 
Sbjct: 232 TSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES 291

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV  D +TY T +DG CK+G I +A+ LF  +   +      +YN ++ GL ++ R  +
Sbjct: 292 VGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVV 351

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A E+F  +    +  ++ TY+ ++GGLC +   D+A  L   +    V  +++TF+++IR
Sbjct: 352 AKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIR 411

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
              ++    +  EL   +    ++P      +++  L K E
Sbjct: 412 AMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEE 452


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 221/440 (50%), Gaps = 21/440 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R SHGF+           PD V+F SL  G  ++ ++++   ++  + +  C P+V TY+
Sbjct: 118 RASHGFIC---------KPDIVSFNSLFNGF-SKMKMLDEVFVYMGVMLKCCSPNVVTYS 167

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T ++  C++    +AL  F  M            PN VT+T +IDG CK G ++ A  L 
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRD------ALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+   +  NVVTYT++I GFC   +   A+ ++  M++  V+PN + +  I+D   + 
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G  D A + L  M+  G+R D   Y  ++ G C  G++  A E+   ME       +  +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + ++N Y K+  ++ A+++Y +++ +G +PDVV  +T+  G+ +  Q+  A   F   + 
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA 401

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           N V      Y   ID LCK G  +E   LF  +       D   Y S I GLCK G L  
Sbjct: 402 NDV-----MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A +L   +    L+ +++ Y+ +I GL + G M +AR +F +M  + + P+   FD+LIR
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516

Query: 423 GFIRINEPSKVIELLHKMKE 442
            + +    +   +LL  M+ 
Sbjct: 517 AYEKEGNMAAASDLLLDMQR 536



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 216/439 (49%), Gaps = 15/439 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRV---FGCEPDVFTYTTLVNGLCRTSHTIVA 77
           PD +++ SLI G C    I  A+ +   LR    F C+PD+ ++ +L NG  +       
Sbjct: 89  PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK------- 141

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           + + +E+    G     C PN VTY+T ID  CK G +  A +    MK   + PNVVT+
Sbjct: 142 MKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTF 201

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           T +I G+C A D   A  L+ EM    +  NVVT+  ++D  CK G+M  A  +   M++
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
             V P++  Y T++DGF   G  ++A +    M + G +  + +Y ++I+G C N +++ 
Sbjct: 262 DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKE 321

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  +  +M    + PD+VI  T+    F+  +++ A  ++ ++   G   D     T ID
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G+ KNG + EA+  F     ++   D+  Y  LID LCK G       LF  +    LVP
Sbjct: 382 GIAKNGQLHEAIVYF----CIEKANDV-MYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +   Y+  I GLC  G +  A  L   M +  ++ +++ +  LI G        +  ++ 
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496

Query: 438 HKMKEINVMPDASIVSIVV 456
            +M    + PD+++  +++
Sbjct: 497 DEMLNSGISPDSAVFDLLI 515



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 179/348 (51%), Gaps = 8/348 (2%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           + L  +  +   P+  ++ SV+   C       A+ +   M   G +P+V+++N ++D  
Sbjct: 42  KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101

Query: 180 CKNGKMDEASRLLD-LMIQHG--VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM--G 234
           C+NG +  AS +L+ L   HG   +PD  ++N+L +GF    ++    E+FV M  M   
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF---SKMKMLDEVFVYMGVMLKC 158

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C   V +YS  I+ +CK+ E++ AL  +  M    + P+VV    L  G  +   +E A 
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            L+ EM+R  ++ +  TY   IDG CK G +  A E++  +   + E +   Y ++IDG 
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            + G  + A++    +    +  ++  Y ++I GLC +G++ +A ++  DME++ +VP++
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           + F  ++  + +       + + HK+ E    PD   +S ++D +AKN
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN 386



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 136/305 (44%), Gaps = 13/305 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +  R+++    P+++ +T++I G         A     K+   G   D+  Y
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++GLC       A  + E+M   +        P+ V +TT+++   K G +  A  +
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSD------LVPDMVIFTTMMNAYFKSGRMKAAVNM 360

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF-IEMMDQGVQPNVVTFNVIMDELC 180
             ++ ++  +P+VV  +++I G       +EA   F IE      + N V + V++D LC
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE------KANDVMYTVLIDALC 414

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G   E  RL   + + G+ PD F Y + + G C  G +  A +L   M   G    + 
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI G      +  A  ++ EML+ GI PD  + + L     +   +  A  L  +M
Sbjct: 475 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534

Query: 301 QRNGV 305
           QR G+
Sbjct: 535 QRRGL 539


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 238/475 (50%), Gaps = 19/475 (4%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
             R+ +    PD V F+ +I+  C    + +A  ++ +++  G  P       ++ G  +
Sbjct: 368 FNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLK 427

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 AL +F +        G +C         I   LCK+G VD A   L  M++K I
Sbjct: 428 AESPEAALEIFNDSFETWIAHGFMC-------NKIFLLLCKQGKVDAATSFLRMMENKGI 480

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           +PNVV Y +++   C  K+ + A+ +F EM+++G+QPN  T+++++D   KN     A  
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWE 540

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-----ESMGCKHTVFSYSIL 245
           +++ MI      +   YNT+++G C  G+ + AKE+  ++      SMGC     SY+ +
Sbjct: 541 VINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCT----SYNSI 596

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I+G+ K  + + A+  Y EM   GI P+VV   +L  G  + ++++ A ++  EM+   +
Sbjct: 597 IDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDL 656

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D   Y   IDG CK   +  A  LF  L  L    ++  YN+LI G    G+++ A++
Sbjct: 657 KLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAID 716

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           L++ +    +  ++ TY+ MI GL  DG +  A DL+ ++    +VP+ I + +L+ G  
Sbjct: 717 LYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLS 776

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           +  +  +  ++L +MK+ +  P+  I S V+   A +    N   +F VH++  E
Sbjct: 777 KKGQFVRASKMLEEMKKKDATPNVLIYSTVI---AGHHREGNLNEAFRVHDEMLE 828



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 214/405 (52%), Gaps = 9/405 (2%)

Query: 33  LCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFG 92
           LC + ++  A +    +   G EP+V  Y  ++   CR  +  +A ++F EM     E G
Sbjct: 459 LCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML----EKG 514

Query: 93  VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
           +  +PN  TY+ +IDG  K      A E++ QM   N + N V Y ++I G C     ++
Sbjct: 515 L--QPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSK 572

Query: 153 AKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           AK +   ++ ++       ++N I+D   K G  D A      M ++G+ P+  T+ +L+
Sbjct: 573 AKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLI 632

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
           +GFC + R++ A E+   M+S   K  V +Y  LI+G+CK  +++ A +L+SE+L  G+ 
Sbjct: 633 NGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLM 692

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P+V ++N L  G   + +++ A  L+ +M  +G++ D +TY T IDGL K+G ++ A +L
Sbjct: 693 PNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDL 752

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           +  L  L    D   Y  L++GL K G+   A ++   +      PNV+ YS +I G   
Sbjct: 753 YSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHR 812

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           +G +++A  +  +M E  +V +   F++L+ G  R+ +P    ++
Sbjct: 813 EGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG--RVEKPPAAAKI 855



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 229/473 (48%), Gaps = 43/473 (9%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+TS+I     E  + EA  +  ++  FG    V   T+L+ G C  +    AL+ F  M
Sbjct: 312 TYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRM 371

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                E G+   P+ V ++ +I+  CK   ++KA E+  +MK   I P+ V    +I+G 
Sbjct: 372 E----EEGLA--PDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGC 425

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
             A+    A  +F +  +  +    +  N I   LCK GK+D A+  L +M   G+ P+ 
Sbjct: 426 LKAESPEAALEIFNDSFETWIAHGFMC-NKIFLLLCKQGKVDAATSFLRMMENKGIEPNV 484

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             YN ++   C    ++ A+ +F  M   G +   F+YSILI+G+ KN++ + A  + ++
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQ 544

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL---------------------------- 296
           M++   + + VI+NT+  GL ++ Q  +A ++                            
Sbjct: 545 MIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEG 604

Query: 297 --------FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
                   + EM  NG++ +  T+ + I+G CK+  +  A+E+ H ++    + D+ AY 
Sbjct: 605 DTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYG 664

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +LIDG CK   ++ A  LF  L    L+PNV  Y+ +I G  N G+MD A DL+  M  +
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVND 724

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +  ++ T+  +I G ++        +L  ++  + ++PD  +  ++V+ L+K
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSK 777



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 172/352 (48%), Gaps = 10/352 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +   +L+    P+  T++ LI G         A  +  ++     E +   Y T++NGLC
Sbjct: 506 IFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLC 565

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +   T  A  + + +      + + C     +Y +IIDG  KEG  D A E   +M +  
Sbjct: 566 KVGQTSKAKEMLQNLIK-EKRYSMGC----TSYNSIIDGFFKEGDTDSAVEAYREMSENG 620

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I PNVVT+TS+I GFC +   + A  +  EM  + ++ +V  +  ++D  CK   M  A 
Sbjct: 621 ISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAY 680

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L   +++ G+ P+   YN L+ GF   G+++ A +L+  M + G    +F+Y+ +I+G 
Sbjct: 681 TLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGL 740

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K+  +  A  LYSE+L+ GI PD +++  L  GL +  Q  RA K+ +EM++     + 
Sbjct: 741 LKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNV 800

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             Y T I G  + G + EA  +   +       D   +N L+     SGR+E
Sbjct: 801 LIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLV-----SGRVE 847



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/441 (22%), Positives = 181/441 (41%), Gaps = 83/441 (18%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           + VT   ++    +E   ++A ++  ++  +  +P+ + ++  ++  C  KD   A  L 
Sbjct: 238 DNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLL 297

Query: 158 IEMMDQGVQP-NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
            EM ++G  P +  T+  ++    K G M+EA ++ D M+  G+        +L+ GFC 
Sbjct: 298 REMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCN 357

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
              +  A + F  ME  G       +S++I  +CKN E+E A+ +Y  M S GI P  V+
Sbjct: 358 GNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVL 417

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG-----LCKNGYIVEAVEL 331
            + +  G  +    E A ++F++      + +TW    F+       LCK G +  A   
Sbjct: 418 VHKMIQGCLKAESPEAALEIFND------SFETWIAHGFMCNKIFLLLCKQGKVDAATSF 471

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM------ 385
              +     E ++  YN+++   C+   +++A  +F  +    L PN  TYSI+      
Sbjct: 472 LRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFK 531

Query: 386 -----------------------------IGGLCNDGQMDKARDL--------------- 401
                                        I GLC  GQ  KA+++               
Sbjct: 532 NQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCT 591

Query: 402 ---------------------FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
                                + +M EN + PNV+TF  LI GF + N     +E++H+M
Sbjct: 592 SYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEM 651

Query: 441 KEINVMPDASIVSIVVDLLAK 461
           K  ++  D      ++D   K
Sbjct: 652 KSKDLKLDVPAYGALIDGFCK 672



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 174/401 (43%), Gaps = 35/401 (8%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           E ++  +  +++   +   +D A +    M D+N+ P V    +V+     +   +EAK 
Sbjct: 166 ELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKE 225

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           ++ +M+  GV  + VT  ++M    +  K +EA ++   ++  G  PD   ++  +   C
Sbjct: 226 IYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAAC 285

Query: 216 LTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
               +  A +L   M E  G   +  +Y+ +I    K   +E A+ +  EM+  GI   V
Sbjct: 286 KMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSV 345

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           +   +L  G    +++ +A   F+ M+  G+A D   +   I+  CKN  + +AVE++  
Sbjct: 346 IAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKR 405

Query: 335 LR-----------------ILKCEFDIRAYNSLIDG-----------------LCKSGRL 360
           ++                  LK E    A     D                  LCK G++
Sbjct: 406 MKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKV 465

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A    R +    + PNVV Y+ M+   C    MD AR +F +M E  + PN  T+ +L
Sbjct: 466 DAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSIL 525

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           I GF +  +     E++++M   N   +  I + +++ L K
Sbjct: 526 IDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCK 566



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 96/170 (56%), Gaps = 6/170 (3%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            + +   +L+    P+   + +LI G     ++  A  L+ K+   G   D+FTYTT+++
Sbjct: 679 AYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GL +  + I+A +L+ E+       G+V  P+ + Y  +++GL K+G   +A ++L +MK
Sbjct: 739 GLLKDGNLILASDLYSELL----ALGIV--PDEILYVVLVNGLSKKGQFVRASKMLEEMK 792

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
            K+  PNV+ Y++VI G     + NEA R+  EM+++G+  +   FN+++
Sbjct: 793 KKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLV 842



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 6/143 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +  +++    + D  T+T++I GL  +  ++ A+ L+++L   G  PD   
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEIL 767

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  LVNGL +    + A  + EEM   +        PN + Y+T+I G  +EG +++A  
Sbjct: 768 YVVLVNGLSKKGQFVRASKMLEEMKKKDA------TPNVLIYSTVIAGHHREGNLNEAFR 821

Query: 121 LLLQMKDKNIKPNVVTYTSVIRG 143
           +  +M +K +  +   +  ++ G
Sbjct: 822 VHDEMLEKGLVHDDTIFNLLVSG 844


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 204/382 (53%), Gaps = 6/382 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +PD  T   L+   C   +   A +   K+   G EPD+ T ++LVNG C ++    A+ 
Sbjct: 120 SPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVY 179

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  +M     + G+  + + V  T +ID LCK   V  A E+L +MKD+ I PNVVTY+S
Sbjct: 180 VAGQME----KMGI--KRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 233

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C +    +A+R   EM  + + PNV+TF+ ++D   K GK+ +   +  +MIQ  
Sbjct: 234 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 293

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+ FTY++L+ G C+  RV+ A ++   M S GC   V +YS L NG+ K+  ++  +
Sbjct: 294 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 353

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  +M  +G+  + V  NTL  G F+  +++ A  +F  M  NG+  +  +Y   + GL
Sbjct: 354 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 413

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
             NG + +A+  F  ++  + + DI  Y  +I G+CK+  ++ A +LF  L    + P+ 
Sbjct: 414 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 473

Query: 380 VTYSIMIGGLCNDGQMDKARDL 401
             Y+IMI  L   G   +A  L
Sbjct: 474 KAYTIMIAELNRAGMRTEADAL 495



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 190/354 (53%), Gaps = 6/354 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           S     LG+++K    PD VT +SL+ G C  + I +A  +  ++   G + DV   T L
Sbjct: 140 SSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL 199

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           ++ LC+    + AL + + M +          PN VTY+++I GLCK G +  A+  L +
Sbjct: 200 IDTLCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLCKSGRLADAERRLHE 253

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M  K I PNV+T++++I  +      ++   ++  M+   + PNV T++ ++  LC + +
Sbjct: 254 MDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNR 313

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +DEA ++LDLMI  G  P+  TY+TL +GF  + RV+   +L   M   G      S + 
Sbjct: 314 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 373

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI GY +  +I+ AL ++  M S G+ P++  +N +  GLF   +VE+A   F+ MQ+  
Sbjct: 374 LIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTR 433

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
              D  TY   I G+CK   + EA +LF+ L+  + E D +AY  +I  L ++G
Sbjct: 434 NDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 487



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 220/444 (49%), Gaps = 3/444 (0%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R     F+   + +  +++      +  +A  LF  +      P +  +  ++  + +  
Sbjct: 40  RFWVRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQ 99

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
              V +NL++ + N  G   +   P+  T   +++  C+      A   L +M    I+P
Sbjct: 100 MYDVVINLWKRIENAEG---IEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEP 156

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           ++VT +S++ GFC +    +A  +  +M   G++ +VV   +++D LCKN  +  A  +L
Sbjct: 157 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 216

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M   G+ P+  TY++L+ G C +GR+  A+     M+S      V ++S LI+ Y K 
Sbjct: 217 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 276

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            ++    S+Y  M+   I P+V  +++L  GL   ++V+ A K+ D M   G   +  TY
Sbjct: 277 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 336

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
            T  +G  K+  + + ++L   +       +  + N+LI G  ++G++++AL +F  +  
Sbjct: 337 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS 396

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             L+PN+ +Y+I++ GL  +G+++KA   F  M++     ++IT+ ++I G  +     +
Sbjct: 397 NGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKE 456

Query: 433 VIELLHKMKEINVMPDASIVSIVV 456
             +L +K+K   V PD    +I++
Sbjct: 457 AYDLFYKLKFKRVEPDFKAYTIMI 480



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 6/322 (1%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V G++ K     D V  T LI  LC    ++ A  +  +++  G  P+V TY++L+ GLC
Sbjct: 180 VAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLC 239

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           ++     A     EM +          PN +T++ +ID   K G + K   +   M   +
Sbjct: 240 KSGRLADAERRLHEMDSKK------INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 293

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I PNV TY+S+I G C     +EA ++   M+ +G  PNVVT++ + +   K+ ++D+  
Sbjct: 294 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 353

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           +LLD M Q GV  +  + NTL+ G+   G+++ A  +F  M S G    + SY+I++ G 
Sbjct: 354 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 413

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
             N E+E ALS +  M       D++ +  +  G+ +   V+ A+ LF +++   V  D 
Sbjct: 414 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 473

Query: 310 WTYRTFIDGLCKNGYIVEAVEL 331
             Y   I  L + G   EA  L
Sbjct: 474 KAYTIMIAELNRAGMRTEADAL 495



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 187/388 (48%), Gaps = 6/388 (1%)

Query: 99  TVTYTTII-DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           T+ Y  ++  GL    F D A  L + M      P++V +  V+      + ++    L+
Sbjct: 50  TIDYREVLRSGLHNIKF-DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLW 108

Query: 158 IEMMD-QGVQ--PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
             + + +G++  P++ T N++++  C+  +   A   L  M++ G+ PD  T ++L++GF
Sbjct: 109 KRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGF 168

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           CL+  +  A  +   ME MG K  V   +ILI+  CKN+ +  AL +   M  +GI P+V
Sbjct: 169 CLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNV 228

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +++L  GL +  ++  A +   EM    +  +  T+   ID   K G + +   ++  
Sbjct: 229 VTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKM 288

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +  +  + ++  Y+SLI GLC   R++ A+++   +      PNVVTYS +  G     +
Sbjct: 289 MIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 348

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D    L  DM +  V  N ++ + LI+G+ +  +    + +   M    ++P+    +I
Sbjct: 349 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 408

Query: 455 VVDLLAKNEISLNSLPSFTVHEQQEEVD 482
           V+  L  N     +L  F  H Q+   D
Sbjct: 409 VLAGLFANGEVEKALSRFE-HMQKTRND 435



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 29/226 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    V   +++    P+  T++SLI GLC  +R+ EA  +   +   GC P+V TY
Sbjct: 277 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 336

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGN-------------------------GEFGVVCE 96
           +TL NG  ++S     + L ++M                             G FG +  
Sbjct: 337 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS 396

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN  +Y  ++ GL   G V+KA      M+      +++TYT +I G C A    E
Sbjct: 397 NGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKE 456

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           A  LF ++  + V+P+   + +++ EL + G   EA  L     +H
Sbjct: 457 AYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKH 502


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 248/486 (51%), Gaps = 11/486 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPDV 58
           G+      +  ++++    P+ +T  +L+ GL    +   I  A  +F  +   G   +V
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            T+  LVNG C       AL + E M +   EF V   P+ VTY TI+  + K+G +   
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVS---EFKV--NPDNVTYNTILKAMSKKGRLSDL 259

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMD 177
           KELLL MK   + PN VTY +++ G+C      EA ++ +E+M Q  V P++ T+N++++
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI-VELMKQTNVLPDLCTYNILIN 318

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
            LC  G M E   L+D M    ++PD  TYNTL+DG    G    A++L   ME+ G K 
Sbjct: 319 GLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKA 378

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
              +++I +   CK ++ E       E++   G  PD+V ++TL     ++  +  A ++
Sbjct: 379 NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
             EM + G+  +T T  T +D LCK   + EA  L ++        D   Y +LI G  +
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFR 498

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
             ++E ALE++  +    + P V T++ +IGGLC+ G+ + A + F ++ E+ ++P+  T
Sbjct: 499 EEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDST 558

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
           F+ +I G+ +     K  E  ++  + +  PD    +I+++ L K  ++  +L  F    
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618

Query: 477 QQEEVD 482
           ++ EVD
Sbjct: 619 EEREVD 624



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 237/464 (51%), Gaps = 11/464 (2%)

Query: 2   GRVSHGFVVLGRILKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G++     +L R++      PD VT+ +++K +  + R+ +   L   ++  G  P+  T
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  LV G C+      A  + E M   N        P+  TY  +I+GLC  G + +  E
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTN------VLPDLCTYNILINGLCNAGSMREGLE 331

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN-EAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L+  MK   ++P+VVTY ++I G C+    + EA++L  +M + GV+ N VT N+ +  L
Sbjct: 332 LMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWL 390

Query: 180 CKNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           CK  K +  +R + +L+  HG  PD  TY+TL+  +   G ++ A E+   M   G K  
Sbjct: 391 CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
             + + +++  CK ++++ A +L +    +G   D V + TL +G F   +VE+A +++D
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWD 510

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM++  +     T+ + I GLC +G    A+E F  L       D   +NS+I G CK G
Sbjct: 511 EMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
           R+E A E +         P+  T +I++ GLC +G  +KA + F  + E   V + +T++
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYN 629

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +I  F +  +  +  +LL +M+E  + PD    +  + LL ++
Sbjct: 630 TMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMED 673



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 221/441 (50%), Gaps = 12/441 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S    +L  + K+   P+ VT+ +L+ G C    + EA  +   ++     PD+ TY
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGLC        L L + M +      +  +P+ VTY T+IDG  + G   +A++L
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKS------LKLQPDVVTYNTLIDGCFELGLSLEARKL 367

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELC 180
           + QM++  +K N VT+   ++  C  +      R   E++D  G  P++VT++ ++    
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G +  A  ++  M Q G++ +  T NT+LD  C   +++ A  L  S    G      
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  LI G+ + +++E AL ++ EM    I P V   N+L  GL    + E A + FDE+
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY--NSLIDGLCKSG 358
             +G+  D  T+ + I G CK G + +A E ++    +K  F    Y  N L++GLCK G
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN--ESIKHSFKPDNYTCNILLNGLCKEG 605

Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
             E AL  F +L     V + VTY+ MI   C D ++ +A DL  +MEE  + P+  T++
Sbjct: 606 MTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664

Query: 419 MLIRGFIRINEPSKVIELLHK 439
             I   +   + S+  ELL K
Sbjct: 665 SFISLLMEDGKLSETDELLKK 685



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 206/406 (50%), Gaps = 14/406 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +   F ++  + ++   PD  T+  LI GLC    + E   L   ++    +PDV T
Sbjct: 288 LGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVT 347

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE----GFVD 116
           Y TL++G      ++ A  L E+M N     GV  + N VT+   +  LCKE        
Sbjct: 348 YNTLIDGCFELGLSLEARKLMEQMEND----GV--KANQVTHNISLKWLCKEEKREAVTR 401

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           K KEL+         P++VTY ++I+ +    D + A  +  EM  +G++ N +T N I+
Sbjct: 402 KVKELVDM---HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D LCK  K+DEA  LL+   + G   D  TY TL+ GF    +V  A E++  M+ +   
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
            TV +++ LI G C + + E A+  + E+   G+ PD    N++ +G  +  +VE+AF+ 
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           ++E  ++    D +T    ++GLCK G   +A+  F+TL I + E D   YN++I   CK
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCK 637

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
             +L+ A +L   +    L P+  TY+  I  L  DG++ +  +L 
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 177/365 (48%), Gaps = 33/365 (9%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTK--LRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           + VT    +K LC E +  EA     K  + + G  PD+ TY TL+    +      AL 
Sbjct: 379 NQVTHNISLKWLCKEEK-REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  EM    G+ G+  + NT+T  TI+D LCKE  +D+A  LL     +    + VTY +
Sbjct: 438 MMREM----GQKGI--KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I GF   +   +A  ++ EM    + P V TFN ++  LC +GK + A    D + + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + PD  T+N+++ G+C  GRV  A E +        K   ++ +IL+NG CK    E AL
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           + ++ ++ +  + D V +NT+     +  +++ A+ L  EM+  G+  D +TY +FI  L
Sbjct: 612 NFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670

Query: 320 CKNGYIVEAVELFHTL--------RILKCEFDIR---------------AYNSLIDGLCK 356
            ++G + E  EL            R L+ E +                 AY+ +ID LC 
Sbjct: 671 MEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCS 730

Query: 357 SGRLE 361
            GRL+
Sbjct: 731 RGRLK 735



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 162/335 (48%), Gaps = 40/335 (11%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG---FCLTGRVNHA 223
           P+   F++ +      GK   A ++   MI+  ++P+  T NTLL G   +  +  ++ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFV 282
           +E+F  M  +G    V ++++L+NGYC   ++E AL +   M+S+  + PD V +NT+  
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
            + +  ++    +L  +M++NG+  +  TY   + G CK G + EA ++   ++      
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D+  YN LI+GLC +G +   LEL  ++    L P+VVTY+ +I G    G   +AR L 
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 403 LDMEENAV------------------------------------VPNVITFDMLIRGFIR 426
             ME + V                                     P+++T+  LI+ +++
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           + + S  +E++ +M +  +  +   ++ ++D L K
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 121/284 (42%), Gaps = 63/284 (22%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           ++     +L    K  F  D VT+ +LI G   E ++ +A  ++ +++     P V T+ 
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           +L+ GLC    T +A+  F+E+A    E G++  P+  T+ +II G CKEG V+KA E  
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELA----ESGLL--PDDSTFNSIILGYCKEGRVEKAFEFY 579

Query: 123 LQMKDKNIKPN----------------------------------VVTYTSVIRGFCYAK 148
            +    + KP+                                   VTY ++I  FC  K
Sbjct: 580 NESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDK 639

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL------------DLMI 196
              EA  L  EM ++G++P+  T+N  +  L ++GK+ E   LL            DL +
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQV 699

Query: 197 QHGVRP-----------DAFTYNTLLDGFCLTGRVNHAKELFVS 229
           +    P           +A  Y+ ++D  C  GR+      + S
Sbjct: 700 ETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYTS 743


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 210/443 (47%), Gaps = 8/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD   F +L+  L     +     LF  +R     P+V TY  LV GLC+      AL++
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ-MKD-KNIKPNVVTYT 138
            + M+    +   VC P+ V    I+DGLCK G + +A + + + M+      PN VTY 
Sbjct: 195 LDGMSGPESD---VC-PDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYN 250

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL--DLMI 196
            +   FC A +   A  L  +M  + V PN VT N I+  LC  G++  A         +
Sbjct: 251 CLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTV 310

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
               R +A TY+TL+  F  T  V  A ELF  M   G       Y  +I+G  +   ++
Sbjct: 311 WPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLD 370

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A S+ + M   G + D   +N L  G     ++  A++L  EM+  G+  D +TY T +
Sbjct: 371 DAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLL 430

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            GLCK G  +   EL   +    C   +  + +LI G CK G+++ AL +FRS+    + 
Sbjct: 431 SGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQ 490

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PN V Y+ +I  LC       A +LF +M E  V  NV TF+ L++G    N P K  EL
Sbjct: 491 PNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFEL 550

Query: 437 LHKMKEINVMPDASIVSIVVDLL 459
           +  M+E    PD   + I+++ L
Sbjct: 551 MDLMREGRCTPDYVTIDILMEWL 573



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 208/427 (48%), Gaps = 18/427 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE----PDVFTYTTLVNGLCRTSHTIV 76
           P+ VT+  L+KGLC   R+ +A ++   +   G E    PDV     +V+GLC+T     
Sbjct: 170 PNVVTYGILVKGLCKAGRVGDALSVLDGMS--GPESDVCPDVVMLNNIVDGLCKTGRLQQ 227

Query: 77  ALNLFEE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           A+   EE M + +G     C PNTVTY  +    C+ G V  A EL+ +M+ + + PN V
Sbjct: 228 AVKFVEERMRSVHG-----CAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAV 282

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP----NVVTFNVIMDELCKNGKMDEASRL 191
           T  +++ G C+      A   F E   + V P    N VT++ ++        +  A  L
Sbjct: 283 TLNTIVGGLCWVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMEL 340

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
              M+  G  PDA  Y T++ G    GR++ A  +  SM+  G +    +Y+ILI G+C+
Sbjct: 341 FHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCR 400

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            K +  A  L  EM   G++PDV  +NTL  GL +        +L  +M   G      T
Sbjct: 401 RKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVT 460

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           + T I G CK G I EA+ +F ++     + +   YN+LID LCKS    +A+ELF  + 
Sbjct: 461 FGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMR 520

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              +  NV T++ ++ GL +    +KA +L   M E    P+ +T D+L+     I E  
Sbjct: 521 EKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETD 580

Query: 432 KVIELLH 438
           ++   + 
Sbjct: 581 RLKHFMQ 587



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 197/402 (49%), Gaps = 12/402 (2%)

Query: 2   GRVSHGFVVLGRI--LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFT-KLR-VFGCEPD 57
           GRV     VL  +   +S   PD V   +++ GLC   R+ +A      ++R V GC P+
Sbjct: 186 GRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPN 245

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
             TY  L +  CR  +  +A  L  +M            PN VT  TI+ GLC  G V  
Sbjct: 246 TVTYNCLAHAFCRAGNVGMACELVAKMEKER------VTPNAVTLNTIVGGLCWVGRVGA 299

Query: 118 AKELLLQMKD--KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           A E   + +      + N VTY++++  F +  +   A  LF EM+D+G  P+ + +  +
Sbjct: 300 ALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTM 359

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  L + G++D+A  +   M + G + DA  YN L+ GFC   R+N A EL   M+  G 
Sbjct: 360 ISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGL 419

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           +  V++Y+ L++G CK  +      L  +M+  G +P VV   TL  G  ++ Q++ A +
Sbjct: 420 QPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALR 479

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           +F  M  +G+  +T  Y T ID LCK+     A+ELF  +R      ++  +N+L+ GL 
Sbjct: 480 IFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLR 539

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                E A EL   +  G   P+ VT  I++  L   G+ D+
Sbjct: 540 DKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDR 581



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 184/375 (49%), Gaps = 10/375 (2%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+T  + T++D L + G +    +L   M+D +++PNVVTY  +++G C A    +A  +
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 157 FIEMM--DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ--HGVRPDAFTYNTLLD 212
              M   +  V P+VV  N I+D LCK G++ +A + ++  ++  HG  P+  TYN L  
Sbjct: 195 LDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAH 254

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
            FC  G V  A EL   ME         + + ++ G C    +  AL  + E   + + P
Sbjct: 255 AFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFRE--KRTVWP 312

Query: 273 DV----VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           +     V ++TL       + V  A +LF EM   G + D   Y T I GL + G + +A
Sbjct: 313 EARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDA 372

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
             +  +++    + D +AYN LI G C+  RL  A EL   +    L P+V TY+ ++ G
Sbjct: 373 WSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSG 432

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           LC  G      +L   M +    P+V+TF  LI G+ ++ +  + + +   M E  + P+
Sbjct: 433 LCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPN 492

Query: 449 ASIVSIVVDLLAKNE 463
             I + ++D L K+ 
Sbjct: 493 TVIYNTLIDFLCKSR 507



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 135/317 (42%), Gaps = 41/317 (12%)

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           D A  L D +      PD   +NTLLD     G +    +LF SM     +  V +Y IL
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGIL 178

Query: 246 INGYCKNKEIEGALSLYSEMLS--KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           + G CK   +  ALS+   M      + PDVV+ N +  GL +  ++++A K  +E  R+
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238

Query: 304 --GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G A +T TY       C+ G +  A EL   +   +   +    N+++ GLC  GR+ 
Sbjct: 239 VHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVG 298

Query: 362 IALELFR------------SLPCGVLV-------------------------PNVVTYSI 384
            ALE FR            ++    LV                         P+ + Y  
Sbjct: 299 AALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFT 358

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           MI GL   G++D A  +   M++     +   +++LI GF R    ++  ELL +MKE  
Sbjct: 359 MISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAG 418

Query: 445 VMPDASIVSIVVDLLAK 461
           + PD    + ++  L K
Sbjct: 419 LQPDVYTYNTLLSGLCK 435



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 16/207 (7%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++  + +LG + ++   PD  T+ +L+ GLC     +    L  K+   GC P V T+ 
Sbjct: 403 RLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFG 462

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++G C+      AL +F  M     E G+  +PNTV Y T+ID LCK      A EL 
Sbjct: 463 TLIHGYCKVGQIDEALRIFRSM----DESGI--QPNTVIYNTLIDFLCKSRDTSLAIELF 516

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF--IEMMDQG-VQPNVVTFNVIMDEL 179
            +M++K++  NV T+ ++++G    +D N  ++ F  +++M +G   P+ VT +++M+ L
Sbjct: 517 DEMREKHVPANVTTFNALLKGL---RDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWL 573

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFT 206
              G+ D     L   +QH   P   T
Sbjct: 574 PVIGETDR----LKHFMQHDTTPKRMT 596



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 2/108 (1%)

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           S   + A  L  SL  G   P+   ++ ++  L   G +     LF  M + +V PNV+T
Sbjct: 115 SSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVT 174

Query: 417 FDMLIRGFIRINEPSKVIELLHKMK--EINVMPDASIVSIVVDLLAKN 462
           + +L++G  +       + +L  M   E +V PD  +++ +VD L K 
Sbjct: 175 YGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKT 222


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 219/451 (48%), Gaps = 18/451 (3%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
            PD  TF SL+  L     +     LFT +R    +PD+ TY  L+N LC+      AL 
Sbjct: 128 APDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALK 187

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA----KELLLQMKDKNIKPNVV 135
           + + M++   +   VC  + V   T++DGLCK G +  A     E + Q+      PN V
Sbjct: 188 VLDRMSSPGSD---VCA-DIVILNTVVDGLCKIGRLQDAIVFVDERMRQVH--GCAPNTV 241

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY  +    C   D + A ++   M  +GV PNV+T N I+  LC+ G++  A   LD  
Sbjct: 242 TYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAA---LDFF 298

Query: 196 IQHG-----VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
            +        R +A TY+TL+  F     V  A ELF  M   G       Y  +I+G  
Sbjct: 299 REKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLT 358

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           +   +  A ++ + M   G K D   +N L  G     ++  A +LF+EM+  G+  D +
Sbjct: 359 QAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVY 418

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY T +  LCK G      EL   +    C+  +  + +L+ G CK+G+ + AL++FRS+
Sbjct: 419 TYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSM 478

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               + PN V Y+ +I  LC   ++D A  LF +M EN V  NV T++ L++G    N P
Sbjct: 479 GEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMP 538

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            K  EL+ +MKE    PD   + ++++ L +
Sbjct: 539 EKAFELMDQMKEERCTPDYVTMDVLMEWLPE 569



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 186/373 (49%), Gaps = 6/373 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+  T+ +++  L + G +    EL   M++ ++KP++VTY  ++   C A    +A ++
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188

Query: 157 FIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ--HGVRPDAFTYNTLLD 212
              M   G  V  ++V  N ++D LCK G++ +A   +D  ++  HG  P+  TYN L D
Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLAD 248

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-- 270
             C  G ++ A ++   ME  G    V + + ++ G C+   +  AL  + E  +  +  
Sbjct: 249 ACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEA 308

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           + + V ++TL       + V  A +LF EM   G   D   Y T I GL + G +V+A  
Sbjct: 309 RGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACN 368

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +  +++    + D +AYN LI G C+  RL  A +LF  +    L P+V TY+ ++  LC
Sbjct: 369 IAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLC 428

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             G      +L  +M ++   P+V+TF  L+ G+ +  +  + +++   M E  + P+  
Sbjct: 429 KAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTV 488

Query: 451 IVSIVVDLLAKNE 463
           I + ++D L K+ 
Sbjct: 489 IYNTLIDFLCKSR 501



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 182/380 (47%), Gaps = 10/380 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           D V   +++ GLC   R+ +A     +   +V GC P+  TY  L +  CR     +A  
Sbjct: 202 DIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQ 261

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK--NIKPNVVTY 137
           + E M     + GV   PN +T  TI+ GLC+ G V  A +   + +      + N VTY
Sbjct: 262 IVERME----KEGVT--PNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTY 315

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           ++++  F +  +   A  LF EM DQG  P+ V +  ++  L + G++ +A  +   M +
Sbjct: 316 STLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKK 375

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G + D   YN L+ GFC   R++ A +LF  M+  G +  V++Y+ L++  CK  +   
Sbjct: 376 AGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSA 435

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
              L   M+  G +P VV   TL  G  +  + + A K+F  M    +  +T  Y T ID
Sbjct: 436 VDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLID 495

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LCK+  +  A++LF  +R      ++  YN+L+ GL      E A EL   +      P
Sbjct: 496 FLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTP 555

Query: 378 NVVTYSIMIGGLCNDGQMDK 397
           + VT  +++  L   G+ ++
Sbjct: 556 DYVTMDVLMEWLPEIGETER 575



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 174/363 (47%), Gaps = 6/363 (1%)

Query: 1   MGRVSHGFVVLGRILKSCF--TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDV 58
           +GR+    V +   ++      P+ VT+  L    C    I  A  +  ++   G  P+V
Sbjct: 216 IGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNV 275

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            T  T+V GLCR      AL+ F E      E       N VTY+T++        V  A
Sbjct: 276 ITMNTIVGGLCRVGRVGAALDFFREKRTTWLE----ARGNAVTYSTLVSAFLHCNNVALA 331

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            EL  +M D+   P+ V Y ++I G   A    +A  +   M   G + +   +N+++  
Sbjct: 332 MELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGG 391

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
            C+  ++ EA +L + M   G++PD +TYNTLL   C  G  +   EL  +M   GC+ +
Sbjct: 392 FCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPS 451

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V ++  L++GYCK  + + AL ++  M    I+P+ VI+NTL   L +  +V+ A KLFD
Sbjct: 452 VVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFD 511

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EM+ N V A+  TY   + GL       +A EL   ++  +C  D    + L++ L + G
Sbjct: 512 EMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIG 571

Query: 359 RLE 361
             E
Sbjct: 572 ETE 574



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 155/334 (46%), Gaps = 33/334 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP--DV 58
           +G +     ++ R+ K   TP+ +T  +++ GLC   R+  A   F + R    E   + 
Sbjct: 253 VGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNA 312

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMAN---------------GNGEFGVVCEPNTVT-- 101
            TY+TLV+     ++  +A+ LF EMA+               G  + G + +   +   
Sbjct: 313 VTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAAS 372

Query: 102 ------------YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
                       Y  +I G C++  + +A +L  +MK   ++P+V TY +++   C A D
Sbjct: 373 MKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGD 432

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
           ++    L   M+D G QP+VVTF  ++   CK GK DEA ++   M +  ++P+   YNT
Sbjct: 433 FSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNT 492

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           L+D  C +  V+ A +LF  M        V +Y+ L+ G       E A  L  +M  + 
Sbjct: 493 LIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEER 552

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
             PD V  + L   L EI + ER  K F E QR+
Sbjct: 553 CTPDYVTMDVLMEWLPEIGETER-LKCFME-QRD 584



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 6/277 (2%)

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           D AS L D +      PD  T+N+LL      G +    ELF SM     K  + +Y IL
Sbjct: 113 DAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGIL 172

Query: 246 INGYCKNKEIEGALSLYSEMLSKG--IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR- 302
           +N  CK   +  AL +   M S G  +  D+VI NT+  GL +I +++ A    DE  R 
Sbjct: 173 LNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQ 232

Query: 303 -NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G A +T TY    D  C+ G I  A ++   +       ++   N+++ GLC+ GR+ 
Sbjct: 233 VHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVG 292

Query: 362 IALELFRSLPCGVLVP--NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            AL+ FR      L    N VTYS ++    +   +  A +LF +M +    P+ + +  
Sbjct: 293 AALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFT 352

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +I G  +         +   MK+     D    +I++
Sbjct: 353 MISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILI 389


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 237/470 (50%), Gaps = 15/470 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  S G  +LG++      P+ V + +LI   C E +  +A  L  K+R  G  P V T+
Sbjct: 196 GLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETF 255

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            + ++ LC +   + A  +F +M   + E G+   PN +TY  ++ G CKEG +++AK L
Sbjct: 256 NSRISALCGSGKILEASRIFRDMQI-DEELGLP-HPNVITYKLMLMGFCKEGMLEEAKTL 313

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  MK      N+ +Y   + G        EA  +  EM+  G++P++ ++N++MD LCK
Sbjct: 314 VDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCK 373

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG + +A  L+ LMI++G+ PD  TY+TLL G+C  G+V  A  L   M S  C    ++
Sbjct: 374 NGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYT 433

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            ++L++   K   I  A +L  +M  KG   D V  N +   L    Q+++A ++ + M 
Sbjct: 434 CNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMW 493

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G AA      +FI GL  +           T+   KC  D+  Y+++I GLCK+GRL+
Sbjct: 494 THGSAALGNLGNSFI-GLVDD-----------TISGKKCTPDLVTYSTIISGLCKAGRLD 541

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A + F  +    L P+   Y   I   C +G++  A  +  DME+      + T++ LI
Sbjct: 542 DAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLI 601

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
            G    N+  ++  L+ +M+E  V PD    + +++ L +    +N  PS
Sbjct: 602 LGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGG-RINDAPS 650



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 240/519 (46%), Gaps = 74/519 (14%)

Query: 13  RILKSCF---TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + L+S F    P    +  L+K    E+R+   + L+  + +    P+ +T+  L+  LC
Sbjct: 99  KSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLC 158

Query: 70  RTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
            + H   A  LF++M A G       CEPN  T+  ++ G C+ G   K  ELL QM+  
Sbjct: 159 DSGHLEDARELFDKMPARG-------CEPNEFTFGILVRGYCRAGLASKGLELLGQMRTM 211

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            I PN V Y ++I  FC     ++A++L  +M + G+ P+V TFN  +  LC +GK+ EA
Sbjct: 212 GILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEA 271

Query: 189 SRLL-DLMIQHGV---RPDAFTYNTLLDGFCLTGRVNHAKEL---------FVSMES--- 232
           SR+  D+ I   +    P+  TY  +L GFC  G +  AK L         F+++ES   
Sbjct: 272 SRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNI 331

Query: 233 -----------------------MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
                                  +G +  ++SY+I+++G CKN  +  A  L   M+  G
Sbjct: 332 WLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNG 391

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           I PD V ++TL  G     +V  A  L  EM  N  + +T+T    +  L K G I EA 
Sbjct: 392 ILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAE 451

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR------SLPCGVL-------- 375
            L   +       D    N +I+ LC +G+L+ A+E+        S   G L        
Sbjct: 452 NLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLV 511

Query: 376 ---------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
                     P++VTYS +I GLC  G++D A+  F++M    + P+   +D  I  F R
Sbjct: 512 DDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCR 571

Query: 427 INEPSKVIELLHKMKEINVMPD-ASIVSIVVDLLAKNEI 464
             + S   ++L  M++        +  S+++ L +KN+I
Sbjct: 572 EGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQI 610



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 200/457 (43%), Gaps = 56/457 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV---FGC-EPD 57
           G+      ++ ++ +    P   TF S I  LC   +I+EA+ +F  +++    G   P+
Sbjct: 231 GKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPN 290

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANG------------------NGEF-------- 91
           V TY  ++ G C+      A  L + M                     NG+         
Sbjct: 291 VITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLK 350

Query: 92  ---GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
              G+  EP+  +Y  ++DGLCK G +  A+ L+  M    I P+ VTY++++ G+C   
Sbjct: 351 EMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKG 410

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
              EA  L  EM+     PN  T NV++  L K G++ EA  LL  M + G   D  T N
Sbjct: 411 KVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCN 470

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMG-----------------------CKHTVFSYSIL 245
            +++  C  G+++ A E+   M + G                       C   + +YS +
Sbjct: 471 IIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTI 530

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I+G CK   ++ A   + EM+SKG++PD  I++T         ++  AF++  +M++ G 
Sbjct: 531 ISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGC 590

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
                TY + I GL     I E   L   +R      D+  YN +++ LC+ GR+  A  
Sbjct: 591 NKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPS 650

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           +   +    + PN+ ++ I+I   C       + ++F
Sbjct: 651 VLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF 687



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 208/480 (43%), Gaps = 75/480 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++   ++VL  +L     PD  ++  ++ GLC    + +A  L   +   G  PD  TY
Sbjct: 340 GKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTY 399

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL++G C       A NL  EM + N      C PNT T   ++  L KEG + +A+ L
Sbjct: 400 STLLHGYCSKGKVFEANNLLHEMISNN------CSPNTYTCNVLLHSLWKEGRISEAENL 453

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL------------------FIEMMDQ 163
           L +M +K    + VT   +I   C     ++A  +                  FI ++D 
Sbjct: 454 LQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDD 513

Query: 164 GVQ-----PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            +      P++VT++ I+  LCK G++D+A +    M+  G++PD+  Y+T +  FC  G
Sbjct: 514 TISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREG 573

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           +++ A ++   ME  GC  T+ +Y+ LI G     +I     L  EM  KG+ PDV  +N
Sbjct: 574 KISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYN 633

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK----------------- 321
            +   L E  ++  A  + DEM + G++ +  ++R  I   CK                 
Sbjct: 634 HMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV 693

Query: 322 -----------------NGYIVEAVELFHTLRILKCEFDIRA--YNSLIDGLCKSGRLEI 362
                             G + EA ELF T   L   FDI    Y  LID LCK  +LE 
Sbjct: 694 CGHKEALYTLMFNELLVGGKVAEAKELFET--ALDRSFDIGNFLYKDLIDRLCKDEKLEA 751

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM--------EENAVVPNV 414
           A ++   L       +  ++  +I G    G    A +L   M        +EN   PNV
Sbjct: 752 ASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESNKENKAYPNV 811


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 232/459 (50%), Gaps = 12/459 (2%)

Query: 3   RVSHGFVVLGRILK-SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           ++S    ++G++   SCF PD V++ +++  LC + ++ EA  L   ++  G  P+  T+
Sbjct: 63  KLSEAIGLIGKMKHFSCF-PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTF 121

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+G C+      A  + + MA  N        P+  TYTT+I GLCK+G +D+A  L
Sbjct: 122 NILVSGYCKLGWLKEAAEVIDIMARNN------VLPDVRTYTTLIGGLCKDGKIDEAFRL 175

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M++  + P+VVTY  +I G        +   L  EM  +GV+PN VT+NV++    K
Sbjct: 176 RDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVK 235

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GKMD A   L  M + G  PD  T+NTL +G+C  GR++ A  +   M   G K    +
Sbjct: 236 EGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 295

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            + +++  C  ++++ A  L S    +G   D V + TL +G F++ +       +DEM+
Sbjct: 296 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSX----XWDEMK 351

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +     TY T I GLC++G   ++++  + L       D   YN++I G C+ G+++
Sbjct: 352 EKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVD 411

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A      +      P++ T +I++ GLC +G +DKA  LF          + +TF+ +I
Sbjct: 412 KAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTII 471

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
            G        +  +LL +M+E  + PD    + ++  LA
Sbjct: 472 SGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALA 510



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 222/439 (50%), Gaps = 13/439 (2%)

Query: 21  PDAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           P+ +T  +LIK L    ++  +  + A+F+ +   G E +  T+  L+ G C  +    A
Sbjct: 8   PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEA 67

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           + L  +M +        C P+ V+Y TI+D LCK+G +++A++LLL MK+  + PN  T+
Sbjct: 68  IGLIGKMKH------FSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTF 121

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             ++ G+C      EA  +   M    V P+V T+  ++  LCK+GK+DEA RL D M  
Sbjct: 122 NILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMEN 181

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
             + P   TYN L++G           EL   ME  G K    +Y++++  Y K  +++ 
Sbjct: 182 LKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDN 241

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A +   +M   G  PD V  NTL  G  +  ++  AF++ DEM R G+  ++ T  T + 
Sbjct: 242 AGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILH 301

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC    + +A +L  +        D  +Y +LI G  K G+     E+        ++P
Sbjct: 302 TLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEK----EIIP 357

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +++TY  MIGGLC  G+ D++ D   ++ E+ +VP+  T++ +I G+ R  +  K     
Sbjct: 358 SIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFR 417

Query: 438 HKMKEINVMPDASIVSIVV 456
           +KM + +  PD    +I+V
Sbjct: 418 NKMVKKSFKPDLFTCNILV 436



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 212/480 (44%), Gaps = 60/480 (12%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     V+  + ++   PD  T+T+LI GLC + +I EA  L  ++      P V T
Sbjct: 131 LGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVT 190

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+NG    S ++    L +EM       G   +PN VTY  ++    KEG +D A  
Sbjct: 191 YNMLINGCFECSSSLKGFELIDEME------GKGVKPNAVTYNVVVKWYVKEGKMDNAGN 244

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L +M++    P+ VT+ ++  G+C A   +EA R+  EM  +G++ N VT N I+  LC
Sbjct: 245 ELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 304

Query: 181 KNGKMDEASRLL-------------------------------DLMIQHGVRPDAFTYNT 209
              K+D+A +LL                               D M +  + P   TY T
Sbjct: 305 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGT 364

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           ++ G C +G+ + + +    +   G      +Y+ +I GYC+  +++ A    ++M+ K 
Sbjct: 365 MIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKS 424

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
            KPD+   N L  GL     +++A KLF      G A D  T+ T I GLC+ G   EA 
Sbjct: 425 FKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAF 484

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL-PCGVLV------------ 376
           +L   +   K   D   +N+++  L  +GR++ A E    +   G L             
Sbjct: 485 DLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTE 544

Query: 377 ----------PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
                     PN V +S  I  LC  G+   A  +  +  +  ++ +  T+  L+ G I+
Sbjct: 545 SSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 3/279 (1%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDE---ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           ++PN++T N ++  L +         +  +   +I+ GV  +  T+N L+ G C+  +++
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  L   M+   C     SY+ +++  CK  ++  A  L  +M + G+ P+    N L 
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G  ++  ++ A ++ D M RN V  D  TY T I GLCK+G I EA  L   +  LK  
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
             +  YN LI+G  +        EL   +    + PN VTY++++     +G+MD A + 
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
              MEE+   P+ +TF+ L  G+ +    S+   ++ +M
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEM 284



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 109/202 (53%)

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +++S+++  G++ +    N L  G    +++  A  L  +M+      D  +Y T +D L
Sbjct: 34  AIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVL 93

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G + EA +L   ++      +   +N L+ G CK G L+ A E+   +    ++P+V
Sbjct: 94  CKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDV 153

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+ +IGGLC DG++D+A  L  +ME   ++P+V+T++MLI G    +   K  EL+ +
Sbjct: 154 RTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDE 213

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M+   V P+A   ++VV    K
Sbjct: 214 MEGKGVKPNAVTYNVVVKWYVK 235



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 7/168 (4%)

Query: 300 MQRNGVAADTWTYRTFIDGLCK-----NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           M+R  +  +  T  T I  L +     + Y+ +A+  F  +  L  E +   +N LI G 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAI--FSDVIKLGVEVNTNTFNILICGC 58

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C   +L  A+ L   +      P+ V+Y+ ++  LC  G++++ARDL LDM+ N + PN 
Sbjct: 59  CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            TF++L+ G+ ++    +  E++  M   NV+PD    + ++  L K+
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKD 166


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 212/407 (52%), Gaps = 6/407 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +LKS    +A +F  +I G C     +    L   L  FG  P+V  YTTL++G C+   
Sbjct: 149 VLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGD 208

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
            ++A NLF +M       G+V  PN  TY+ +++G  K+G   +  ++   M    I PN
Sbjct: 209 VMLAKNLFCKM----DRLGLV--PNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPN 262

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
              Y  +I  +C     ++A ++F EM ++G+   V+T+N+++  LC+  K  EA +L+ 
Sbjct: 263 AYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH 322

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            + + G+ P+  TYN L++GFC  G+++ A  LF  ++S G   T+ +Y+ LI GY K +
Sbjct: 323 KVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVE 382

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            + GAL L  EM  + I    V +  L      ++  ++A ++   M+++G+  D +TY 
Sbjct: 383 NLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYS 442

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
             I G C NG + EA + F +L  +  + +   YN++I G CK G    AL L   +   
Sbjct: 443 VLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            +VPNV ++   +G LC D +  +A  L   M  + + P+V  + M+
Sbjct: 503 GMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 191/366 (52%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  ++  +I G C+ G+  +   LL  +++  + PNVV YT++I G C   D   AK LF
Sbjct: 157 NAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLF 216

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M   G+ PN  T++V+M+   K G   E  ++ + M + G+ P+A+ YN L+  +C  
Sbjct: 217 CKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCND 276

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G V+ A ++F  M   G    V +Y+ILI G C+ K+   A+ L  ++   G+ P++V +
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N L  G  ++ +++ A +LF++++ +G++    TY T I G  K   +  A++L   +  
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
                    Y  LID   +    + A E+   +    LVP+V TYS++I G C +G M +
Sbjct: 397 RCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKE 456

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A   F  + E  + PN + ++ +I G+ +     + + LL++M    ++P+ +     + 
Sbjct: 457 ASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMG 516

Query: 458 LLAKNE 463
           LL ++E
Sbjct: 517 LLCRDE 522



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 175/362 (48%), Gaps = 1/362 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C   T  Y  I++        D+A   L  M  +   P   T+ +++     +  +++A 
Sbjct: 85  CSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAW 144

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            +F  ++   V  N  +F +++   C+ G      RLL ++ + G+ P+   Y TL+DG 
Sbjct: 145 WIF-NVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGC 203

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G V  AK LF  M+ +G      +YS+L+NG+ K         +Y  M   GI P+ 
Sbjct: 204 CKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNA 263

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +N L         V++AFK+F EM+  G+A    TY   I GLC+     EAV+L H 
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +  +    +I  YN LI+G C  G+++ A+ LF  L    L P +VTY+ +I G      
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +  A DL  +MEE  +  + +T+ +LI  F R+N   K  E+   M++  ++PD    S+
Sbjct: 384 LAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSV 443

Query: 455 VV 456
           ++
Sbjct: 444 LI 445



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 6/312 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    GF +   + +S   P+A  +  LI   C +  + +A  +F ++R  G    V TY
Sbjct: 242 GLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTY 301

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLCR      A+ L  ++        V   PN VTY  +I+G C  G +D A  L
Sbjct: 302 NILIGGLCRGKKFGEAVKLVHKVNK------VGLSPNIVTYNILINGFCDVGKMDTAVRL 355

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             Q+K   + P +VTY ++I G+   ++   A  L  EM ++ +  + VT+ +++D   +
Sbjct: 356 FNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFAR 415

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
               D+A  +  LM + G+ PD +TY+ L+ G C+ G +  A + F S+  M  +     
Sbjct: 416 LNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVI 475

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+GYCK      AL L +EM+  G+ P+V    +    L    + + A  L  +M 
Sbjct: 476 YNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMI 535

Query: 302 RNGVAADTWTYR 313
            +G+      Y+
Sbjct: 536 NSGLKPSVSLYK 547


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 216/400 (54%), Gaps = 8/400 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A + F  +      P V  +  +++      H   A++L   +     E   + +P+  
Sbjct: 53  DAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRL-----ELKGI-QPDFF 106

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T   +++  C  G ++    +L ++  +  +P+ +T+T++I+G C     N+A     ++
Sbjct: 107 TLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 166

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + QG++ + V++  +++ +CK G    A +L+  +     +P+   YNT++D  C    V
Sbjct: 167 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 226

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A  LF  M + G    V SY+I+I G+CK+K ++ AL+L+ EM  K + P +V + +L
Sbjct: 227 SEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSL 286

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +  ++   ++L DEM   G+ AD  TY + IDGLCKNG++  A+ LF+ ++  + 
Sbjct: 287 MDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXR- 345

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
            FD   +  L+DGLCK GRL+ A E+F+ L       +V  Y++MI G C  G +++A  
Sbjct: 346 -FDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALT 404

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +   ME+N  +P+ +TF+++I      +E  K  +LLH+M
Sbjct: 405 MRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEM 444



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/335 (34%), Positives = 183/335 (54%), Gaps = 8/335 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG+++ GF VL +ILK  + P  +TFT+LIKGLC + ++ +A     KL   G + D  +
Sbjct: 118 MGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVS 177

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NG+C+   T  A+ L  ++       G + +PN   Y TIID LCK   V +A  
Sbjct: 178 YGTLINGVCKIGDTRGAIKLVRKID------GRLTKPNVEMYNTIIDALCKYQLVSEAYG 231

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  K I  NVV+Y  +I+GFC +K  +EA  LF EM  + + P +VT+  +MD LC
Sbjct: 232 LFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLC 291

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G++     L+D M   G+  D  TYN+L+DG C  G ++ A  LF  M+    +    
Sbjct: 292 KSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDX--RFDRL 349

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +++IL++G CK   ++ A  ++ ++L+K    DV  +N +  G  +   +E A  +  +M
Sbjct: 350 TFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKM 409

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
           + NG      T+   I+ L +     +A +L H +
Sbjct: 410 EDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEM 444



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 193/386 (50%), Gaps = 8/386 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           TP  + F  ++           A +L  +L + G +PD FT   L+N  C         +
Sbjct: 67  TPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFS 126

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  ++           +P+T+T+TT+I GLC +G V+KA     ++  + IK + V+Y +
Sbjct: 127 VLAKILKRG------YQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGT 180

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C   D   A +L  ++  +  +PNV  +N I+D LCK   + EA  L   M   G
Sbjct: 181 LINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG 240

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           +  +  +YN ++ GFC +  V+ A  LF  M       T+ +Y  L++G CK+  I    
Sbjct: 241 ISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVW 300

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  EM  +GI  DV+ +N+L  GL +   ++RA  LF++M+      D  T+   +DGL
Sbjct: 301 ELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMK--DXRFDRLTFTILLDGL 358

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CK G + +A E+F  L   + + D+  YN +I+G CK G LE AL +   +     +P+ 
Sbjct: 359 CKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSA 418

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDM 405
           VT+ I+I  L    + DKA  L  +M
Sbjct: 419 VTFEIIINALFEKDENDKAEKLLHEM 444



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 211/436 (48%), Gaps = 11/436 (2%)

Query: 24  VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           + F   +  L AE+ I E  AL +  +         T + L N +          N+ + 
Sbjct: 4   LPFHKFLHWLHAEAEIGENRALISPQQ---------TQSILSNLILTKVKPPSIQNVDDA 54

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           ++  N    +   P  + +  I+D          A  L  +++ K I+P+  T   ++  
Sbjct: 55  VSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNC 114

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
           FC+    N    +  +++ +G QP+ +TF  ++  LC  G++++A    D ++  G++ D
Sbjct: 115 FCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFD 174

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             +Y TL++G C  G    A +L   ++    K  V  Y+ +I+  CK + +  A  L+S
Sbjct: 175 QVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFS 234

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM +KGI  +VV +N +  G  +   V+ A  LF EM +  +     TY + +DGLCK+G
Sbjct: 235 EMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSG 294

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            I    EL   +       D+  YNSLIDGLCK+G L+ A+ LF  +       + +T++
Sbjct: 295 RISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--DRLTFT 352

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
           I++ GLC  G++  A+++F D+       +V  ++++I G+ +     + + +  KM++ 
Sbjct: 353 ILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDN 412

Query: 444 NVMPDASIVSIVVDLL 459
             +P A    I+++ L
Sbjct: 413 GCIPSAVTFEIIINAL 428



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 139/278 (50%)

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D+A    + M+     P    +N +LD F      + A  L   +E  G +   F+ +I
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L+N +C   +I    S+ +++L +G +P  +   TL  GL    QV +A    D++   G
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  D  +Y T I+G+CK G    A++L   +     + ++  YN++ID LCK   +  A 
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF  +    +  NVV+Y+IMI G C    +D+A +LF +M +  +VP ++T+  L+ G 
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGL 290

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            +    S V EL+ +M +  +  D    + ++D L KN
Sbjct: 291 CKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKN 328



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/247 (20%), Positives = 99/247 (40%), Gaps = 39/247 (15%)

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           + ++ A+S ++ ML     P V+  N +      +     A  L   ++  G+  D +T 
Sbjct: 49  QNVDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTL 108

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA--YNSLIDGLCKSGRLEIALELFRSL 370
              ++  C  G I     +    +ILK  +      + +LI GLC  G++  AL     L
Sbjct: 109 NILMNCFCHMGQINFGFSVL--AKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 166

Query: 371 PCGVLVPNVVTYSIMIGGLCN--------------DGQMDK------------------- 397
               +  + V+Y  +I G+C               DG++ K                   
Sbjct: 167 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 226

Query: 398 --ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
             A  LF +M    +  NV++++++I+GF +     + + L  +M + N++P       +
Sbjct: 227 SEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSL 286

Query: 456 VDLLAKN 462
           +D L K+
Sbjct: 287 MDGLCKS 293


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 196/359 (54%), Gaps = 10/359 (2%)

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C+ S    A+ L +EM +        C P+ VTY  +++G+C+EG VD A E L  +   
Sbjct: 3   CKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 56

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
             +PN V+Y  V++G C A+ W +A+ L  EM  +G  PNVVTFN+++  LC+ G ++ A
Sbjct: 57  GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 116

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
             +L+ + ++G  P++ +YN LL  FC   +++ A      M S GC   + SY+ L+  
Sbjct: 117 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 176

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C++ E++ A+ L  ++  KG  P ++ +NT+  GL +  + + A +L +EM   G+  D
Sbjct: 177 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 236

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY T   GLC+   I +A+  F  ++ +    +   YN++I GLCK      A++LF 
Sbjct: 237 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 296

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            +     +PN  TY+I+I GL  +G + +ARDL  ++    VV       ++ +G IR+
Sbjct: 297 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRK----SLINKGAIRL 351



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 34  CAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGV 93
           C  S   +A  L  ++R  GC PD+ TY  +VNG+C+      A+   + + +    +G 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG- 57

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
            CEPNTV+Y  ++ GLC     + A+EL+ +M  K   PNVVT+  +I   C       A
Sbjct: 58  -CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 116

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             +  ++   G  PN +++N ++   CK  KMD+A   LDLM+  G  PD  +YNTLL  
Sbjct: 117 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 176

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
            C +G V+ A EL   ++  GC   + SY+ +I+G  K  + + AL L +EM+SKG++PD
Sbjct: 177 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 236

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
           ++ ++T+  GL    ++E A + F ++Q  G+  +T  Y   I GLCK      A++LF 
Sbjct: 237 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 296

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            +    C  +   Y  LI+GL   G ++ A +L   L
Sbjct: 297 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 333



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 167/320 (52%), Gaps = 7/320 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C TPD VT+  ++ G+C E R+ +A      L  +GCEP+  +Y  ++ GLC      
Sbjct: 21  KGC-TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 79

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  L  EM    G+ G  C PN VT+  +I  LC++G V+ A E+L Q+      PN +
Sbjct: 80  DAEELMGEM----GQKG--CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 133

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +Y  ++  FC  K  ++A      M+ +G  P++V++N ++  LC++G++D A  LL  +
Sbjct: 134 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 193

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G  P   +YNT++DG    G+   A EL   M S G +  + +YS +  G C+   I
Sbjct: 194 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 253

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E A+  + ++   GI+P+ V++N + +GL +  +   A  LF  M  NG   +  TY   
Sbjct: 254 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 313

Query: 316 IDGLCKNGYIVEAVELFHTL 335
           I+GL   G I EA +L   L
Sbjct: 314 IEGLAYEGLIKEARDLLDEL 333



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 171/316 (54%)

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C    + +A +L  EM D+G  P++VT+NV+++ +C+ G++D+A   L  +  +G  P+ 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            +YN +L G C   R   A+EL   M   GC   V ++++LI+  C+   +E AL +  +
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           +   G  P+ + +N L     +  ++++A    D M   G   D  +Y T +  LC++G 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           +  AVEL H L+   C   + +YN++IDGL K+G+ + ALEL   +    L P+++TYS 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +  GLC + +++ A   F  +++  + PN + ++ +I G  +  E    I+L   M    
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 445 VMPDASIVSIVVDLLA 460
            MP+ S  +I+++ LA
Sbjct: 303 CMPNESTYTILIEGLA 318



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 156/304 (51%), Gaps = 6/304 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV      L  +      P+ V++  ++KGLC   R  +A  L  ++   GC P+V T+
Sbjct: 41  GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 100

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ LCR      AL + E++     ++G  C PN+++Y  ++   CK+  +DKA   
Sbjct: 101 NMLISFLCRKGLVEPALEVLEQIP----KYG--CTPNSLSYNPLLHAFCKQKKMDKAMAF 154

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  +   P++V+Y +++   C + + + A  L  ++ D+G  P ++++N ++D L K
Sbjct: 155 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 214

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK  EA  LL+ M+  G++PD  TY+T+  G C   R+  A   F  ++ MG +     
Sbjct: 215 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVL 274

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I G CK +E   A+ L++ M+  G  P+   +  L  GL     ++ A  L DE+ 
Sbjct: 275 YNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELC 334

Query: 302 RNGV 305
             GV
Sbjct: 335 SRGV 338



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 148/294 (50%)

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK     +A +LLD M   G  PD  TYN +++G C  GRV+ A E   ++ S GC+   
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY+I++ G C  +  E A  L  EM  KG  P+VV  N L   L     VE A ++ ++
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           + + G   ++ +Y   +   CK   + +A+     +    C  DI +YN+L+  LC+SG 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +++A+EL   L      P +++Y+ +I GL   G+  +A +L  +M    + P++IT+  
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           +  G  R +     I    K++++ + P+  + + ++  L K   + +++  F 
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 296


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 226/463 (48%), Gaps = 15/463 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  TF  LI  LC E ++ +A  L  K+   G  P V TY T++N  C+      AL L
Sbjct: 166 PDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALEL 225

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            ++M    G  G+  E +  TY  ++D LCK     K   LL +M+ + I PN +TY S+
Sbjct: 226 IDQM----GSKGI--EADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSI 279

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I GF        A R+F EM    + PN VT+N ++D  C +G  ++A  +L++M   G 
Sbjct: 280 INGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP 339

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +P+  +Y+ LL+G C   +   +K +   M   G      +Y+ +I+G C+N  +  ++ 
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVK 399

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L  +ML  G+ PDVV  + L  G   + +++   ++  +M + G+A ++  Y T I   C
Sbjct: 400 LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYC 459

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G +VEA +++  +  +  + +    N L+  LCK G++ +A   F  +     VPN +
Sbjct: 460 KTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI 519

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T+  +I G  N G   KA  +F +M +    P+  T+  L++   R  +  +   LL K+
Sbjct: 520 TFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579

Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDE 483
             I   P A      VD +  N I + +  S  + +     DE
Sbjct: 580 HYI---PSA------VDTVTYNTILVETFKSGMLTDAVALFDE 613



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 228/457 (49%), Gaps = 9/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R + G+++L ++ K   +P+ +T+ S+I G   E +I  A  +F ++ +    P+  TY 
Sbjct: 253 RSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYN 312

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            L++G C   +   AL + E M A G        +PN V+Y+ +++GLC+    + +K +
Sbjct: 313 ALIDGHCHDGNFEQALTILEMMEATGP-------KPNEVSYSALLNGLCRHAKFELSKSI 365

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   +    + YT++I G C     NE+ +L  +M+  GV P+VVTF+V+++  C+
Sbjct: 366 LERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCR 425

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+     ++  M + G+ P++  Y TL+  +C TG V  A +++V+M  +G     F 
Sbjct: 426 VGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFI 485

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            ++L++  CK+ ++  A   +  M   G  P+ +  + +  G        +AF +FDEM 
Sbjct: 486 CNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMI 545

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G     +TY   +  LC+ G   EA  L   L  +    D   YN+++    KSG L 
Sbjct: 546 KAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLT 605

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD-MEENAVVPNVITFDML 420
            A+ LF  +    ++P+  TY+I+  GL   G+M  A   + + + + AV P  + +   
Sbjct: 606 DAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTF 665

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + G  R  +    +     M++  +  D    +++++
Sbjct: 666 VDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILN 702



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 221/454 (48%), Gaps = 6/454 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L ++ +S + P  VT+ +++   C + R   A  L  ++   G E D  TY
Sbjct: 182 GKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTY 241

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+ LC+ + +     L ++M         +  PN +TY +II+G  KEG +  A  +
Sbjct: 242 NMLVDDLCKNNRSAKGYLLLKKMRKR------MISPNEITYNSIINGFVKEGKIGAATRI 295

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M   N+ PN VTY ++I G C+  ++ +A  +   M   G +PN V+++ +++ LC+
Sbjct: 296 FQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCR 355

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + K + +  +L+ M  +G+      Y  ++DG C  G +N + +L   M   G    V +
Sbjct: 356 HAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVT 415

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +S+LING+C+  +I+    +  +M   G+ P+ +I+ TL     +   V  AFK++  M 
Sbjct: 416 FSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMS 475

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R G  A+ +     +  LCK+G +  A   FH +  +    +   ++ +I+G   SG   
Sbjct: 476 RIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGL 535

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  +F  +      P+  TY  ++  LC  G+  +A+ L   +       + +T++ ++
Sbjct: 536 KAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTIL 595

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
               +    +  + L  +M + NV+PD+   +I+
Sbjct: 596 VETFKSGMLTDAVALFDEMVQRNVLPDSYTYAII 629



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 219/452 (48%), Gaps = 9/452 (1%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  LI+    E  + +A   F  + + G  P V+T   L+  L +          F+EM 
Sbjct: 101 FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEML 160

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
                   VC P+  T+  +I+ LC EG + KA  LL +M++    P+VVTY +V+  +C
Sbjct: 161 ARR-----VC-PDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
               +  A  L  +M  +G++ +  T+N+++D+LCKN +  +   LL  M +  + P+  
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN++++GF   G++  A  +F  M  +       +Y+ LI+G+C +   E AL++   M
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            + G KP+ V ++ L  GL    + E +  + + M+ NG+      Y   IDGLC+NG +
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            E+V+L   +       D+  ++ LI+G C+ G+++   E+   +    L PN + Y+ +
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTL 454

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I   C  G + +A  +++ M       N    ++L+    +  +        H M +I  
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGN 514

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           +P++     +++       S N L +F++ ++
Sbjct: 515 VPNSITFDCIINGYGN---SGNGLKAFSMFDE 543



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 203/410 (49%), Gaps = 17/410 (4%)

Query: 64  LVNGLCRTSHTIVALNLFE----------EMANGNGE-FGVV------CEPNTVTYTTII 106
           L + L  T+H +V   L+E          +M  G+   FG +      C+ N   +  +I
Sbjct: 46  LTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFDLLI 105

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
               +EG V  A E    M  +   P+V T   ++      +        F EM+ + V 
Sbjct: 106 RVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVC 165

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P+V TFN++++ LC  GK+ +A  LL  M + G  P   TYNT+L+ +C  GR   A EL
Sbjct: 166 PDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALEL 225

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              M S G +    +Y++L++  CKN        L  +M  + I P+ + +N++  G  +
Sbjct: 226 IDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVK 285

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
             ++  A ++F EM    +  +  TY   IDG C +G   +A+ +   +     + +  +
Sbjct: 286 EGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVS 345

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y++L++GLC+  + E++  +   +    ++   + Y+ MI GLC +G ++++  L   M 
Sbjct: 346 YSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKML 405

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           ++ VVP+V+TF +LI GF R+ +   V E++ KM +  + P++ I + ++
Sbjct: 406 KDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLI 455



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 218/481 (45%), Gaps = 10/481 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++    +L ++LK    PD VTF+ LI G C   +I     +  K+   G  P+   Y
Sbjct: 392 GLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIY 451

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL+   C+T   + A  ++  M+       +  + N      ++  LCK+G V  A+  
Sbjct: 452 TTLIYNYCKTGDVVEAFKVYVAMSR------IGYDANCFICNVLVSSLCKDGKVGVAEYF 505

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M      PN +T+  +I G+  + +  +A  +F EM+  G  P+  T+  ++  LC+
Sbjct: 506 FHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCR 565

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK  EA RLLD +       D  TYNT+L     +G +  A  LF  M         ++
Sbjct: 566 AGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYT 625

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           Y+I+  G  +  ++  AL  Y  +L KG + P+ V++ T   GLF   Q + A    ++M
Sbjct: 626 YAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDM 685

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI-LKCEFDIRAYNSLIDGLCKSGR 359
           ++NG+ AD       ++G  + G + +A ++F  +   +     +  YN L+ G  K   
Sbjct: 686 EKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKN 745

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L     L+  +    + P+ +T   +I G C    +D    L   M  + V  +  TF+M
Sbjct: 746 LSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNM 805

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
           LI  +   +E  K  +L++ M   ++ PD +    ++ +L++  +S        +HE  E
Sbjct: 806 LIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSR--VSTVQESHLLLHEMLE 863

Query: 480 E 480
            
Sbjct: 864 R 864



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 161/327 (49%)

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
           K N   +  +IR +       +A   F  M  +G  P+V T N+++ +L K  K+     
Sbjct: 95  KSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
               M+   V PD  T+N L++  C+ G++  A  L   ME  G   +V +Y+ ++N YC
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K    + AL L  +M SKGI+ D   +N L   L + ++  + + L  +M++  ++ +  
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY + I+G  K G I  A  +F  + +L    +   YN+LIDG C  G  E AL +   +
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                 PN V+YS ++ GLC   + + ++ +   M  N ++   I +  +I G  R    
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVD 457
           ++ ++LL KM +  V+PD    S++++
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLIN 421



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 196/442 (44%), Gaps = 32/442 (7%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVFT 60
            G ++    +   +++    PD+ T+  +  GL    +++ A   +  L   G   P+   
Sbjct: 602  GMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVM 661

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFG------------- 92
            YTT V+GL R   +  AL   E+M                NG    G             
Sbjct: 662  YTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMW 721

Query: 93   --VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
              +   P+  TY  ++ G  K+  + K   L   M    I P+ +T  S+I GFC +   
Sbjct: 722  SGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAML 781

Query: 151  NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
            +   +L  +M+  GV  +  TFN+++ + C+  ++ +A  L+++M    + PD  T++++
Sbjct: 782  DVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSI 841

Query: 211  LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
            +        V  +  L   M   GC      Y  L+N  C+   I GA  L  EM + GI
Sbjct: 842  ISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGI 901

Query: 271  KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
                V  + L  GL +  +VE A  + D M R  +     T+ T +   C+N  +VEA++
Sbjct: 902  SSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALK 961

Query: 331  LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL- 389
            L  T+     + D+ AYN LI GLC  G +  AL+L++ +    L PN+ TY I+I  + 
Sbjct: 962  LKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIF 1021

Query: 390  CNDGQMDKARDLFLDMEENAVV 411
             ND  + K   L  D++E  V+
Sbjct: 1022 TNDISLAKGEVLLKDLQERGVI 1043



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 195/437 (44%), Gaps = 43/437 (9%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            D VT+ +++        + +A ALF ++      PD +TY  +  GL R    + AL+ +
Sbjct: 587  DTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFY 646

Query: 82   EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
              +  G G       P  V YTT +DGL + G    A      M+   +  +++    ++
Sbjct: 647  GNLL-GKG----AVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVIL 701

Query: 142  RGFCYAKDWNEAKRLFIEMMDQGV--QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
             G+       +A  +F  MM  G+   P++ T+N+++    K   + + S L ++M++ G
Sbjct: 702  NGYSRMGKMAKAGDIF-TMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTG 760

Query: 200  VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            + PD  T ++L+ GFC +  ++   +L   M   G      ++++LI  YC+  E+  A 
Sbjct: 761  IFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAF 820

Query: 260  SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             L + M    I PD+  H+++   L  +  V+ +  L  EM   G   D   Y   ++ +
Sbjct: 821  DLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRM 880

Query: 320  CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP-- 377
            C+ G+I  A +L   +  L       A ++L+ GL K G++E A  +   +    L+P  
Sbjct: 881  CRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTI 940

Query: 378  ---------------------------------NVVTYSIMIGGLCNDGQMDKARDLFLD 404
                                             +V+ Y+++I GLC DG +  A  L+ +
Sbjct: 941  ATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKE 1000

Query: 405  MEENAVVPNVITFDMLI 421
            +++  + PN+ T+ +LI
Sbjct: 1001 IKQRGLWPNMTTYCILI 1017



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/451 (23%), Positives = 208/451 (46%), Gaps = 8/451 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+++TF  +I G       ++A ++F ++   G  P  FTY  L+  LCR      A  L
Sbjct: 516 PNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRL 575

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +++        +    +TVTY TI+    K G +  A  L  +M  +N+ P+  TY  +
Sbjct: 576 LDKLHY------IPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAII 629

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
             G         A   +  ++ +G V P  V +   +D L + G+   A    + M ++G
Sbjct: 630 FAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNG 689

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES-MGCKHTVFSYSILINGYCKNKEIEGA 258
           +  D    N +L+G+   G++  A ++F  M S +    ++ +Y+IL++GY K K +   
Sbjct: 690 LCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKC 749

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
            +LY+ M+  GI PD +  ++L +G  +   ++   KL  +M  +GVA D  T+   I  
Sbjct: 750 SNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMK 809

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+   + +A +L + + +     D+  ++S+I  L +   ++ +  L   +     +P+
Sbjct: 810 YCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPD 869

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
              Y  ++  +C  G +  A  L  +ME   +    +    L+RG  +  +  +   +L 
Sbjct: 870 RRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLD 929

Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
            M   +++P  +  + ++ +  +NE  + +L
Sbjct: 930 FMLRKSLIPTIATFTTLMHMFCRNESLVEAL 960



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 101/223 (45%)

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           CK     + +LI  Y +   +  AL  +  M  +G  P V   N L   L +  +V   +
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW 153

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
             F EM    V  D  T+   I+ LC  G + +A  L   +        +  YN++++  
Sbjct: 154 LFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWY 213

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK GR + ALEL   +    +  +  TY++++  LC + +  K   L   M +  + PN 
Sbjct: 214 CKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNE 273

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           IT++ +I GF++  +      +  +M  +N++P+    + ++D
Sbjct: 274 ITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALID 316



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%)

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C+ +   ++ LI    + G +  ALE FR +      P+V T ++++G L  + ++    
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW 153

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             F +M    V P+V TF++LI       +  K   LL KM+E   +P     + V++  
Sbjct: 154 LFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWY 213

Query: 460 AK 461
            K
Sbjct: 214 CK 215


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 215/430 (50%), Gaps = 6/430 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           FT       +LI  L     +  A  ++ ++   G   +V+T   +VN LC+    +  +
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK-MEKV 254

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
             F       G +     P+ VTY T+I     +G +++A EL+  M  K   P V TY 
Sbjct: 255 GTFLSQVQEKGVY-----PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +VI G C    +  AK +F EM+  G+ P+  T+  ++ E CK G + E  ++   M   
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            V PD   +++++  F  +G ++ A   F S++  G       Y+ILI GYC+   I  A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           ++L +EML +G   DVV +NT+  GL +   +  A KLF+EM    +  D++T    IDG
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G +  A+ELF  ++  +   D+  YN+L+DG  K G ++ A E++  +    ++P 
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            ++YSI++  LC+ G + +A  ++ +M    + P V+  + +I+G+ R    S     L 
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609

Query: 439 KMKEINVMPD 448
           KM     +PD
Sbjct: 610 KMISEGFVPD 619



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 238/478 (49%), Gaps = 11/478 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++      L ++ +    PD VT+ +LI    ++  + EA  L   +   G  P V+TY
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++NGLC+      A  +F EM            P++ TY +++   CK+G V + +++
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSG------LSPDSTTYRSLLMEACKKGDVVETEKV 362

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M+ +++ P++V ++S++  F  + + ++A   F  + + G+ P+ V + +++   C+
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +  A  L + M+Q G   D  TYNT+L G C    +  A +LF  M         ++
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            +ILI+G+CK   ++ A+ L+ +M  K I+ DVV +NTL  G  ++  ++ A +++ +M 
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +     +Y   ++ LC  G++ EA  ++  +     +  +   NS+I G C+SG   
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE--NAVVPNVITFDM 419
                   +     VP+ ++Y+ +I G   +  M KA  L   MEE    +VP+V T++ 
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
           ++ GF R N+  +   +L KM E  V PD S  + +++     +   N   +F +H++
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD---NLTEAFRIHDE 717



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 218/449 (48%), Gaps = 43/449 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   +L+S  +PD+ T+ SL+   C +  ++E   +F+ +R     PD+  +
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +++++   R+ +   AL  F    N   E G++  P+ V YT +I G C++G +  A  L
Sbjct: 379 SSMMSLFTRSGNLDKALMYF----NSVKEAGLI--PDNVIYTILIQGYCRKGMISVAMNL 432

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  +    +VVTY +++ G C  K   EA +LF EM ++ + P+  T  +++D  CK
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +  A  L   M +  +R D  TYNTLLDGF   G ++ AKE++  M S     T  S
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YSIL+N  C    +  A  ++ EM+SK IKP V+I N++  G                  
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC---------------- 596

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R+G A+D     +F++ +   G++ + +                +YN+LI G  +   + 
Sbjct: 597 RSGNASDG---ESFLEKMISEGFVPDCI----------------SYNTLIYGFVREENMS 637

Query: 362 IALELFRSLP--CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            A  L + +    G LVP+V TY+ ++ G C   QM +A  +   M E  V P+  T+  
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +I GF+  +  ++   +  +M +    PD
Sbjct: 698 MINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 183/376 (48%), Gaps = 17/376 (4%)

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDK-----------------NIKPNVVTYTSVI 141
           +++ + +I  L + G +  A+  LL+M  +                 N   N   +  +I
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLI 172

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           R +  A+   EA   F  +  +G   ++   N ++  L + G ++ A  +   + + GV 
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            + +T N +++  C  G++         ++  G    + +Y+ LI+ Y     +E A  L
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
            + M  KG  P V  +NT+  GL +  + ERA ++F EM R+G++ D+ TYR+ +   CK
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G +VE  ++F  +R      D+  ++S++    +SG L+ AL  F S+    L+P+ V 
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+I+I G C  G +  A +L  +M +     +V+T++ ++ G  +     +  +L ++M 
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472

Query: 442 EINVMPDASIVSIVVD 457
           E  + PD+  ++I++D
Sbjct: 473 ERALFPDSYTLTILID 488



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 18/227 (7%)

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           KHT  S S +I+   ++  +  A S    M+ +     + I N+L          +  F 
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFD 169

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L                RT++        + EA E F  LR       I A N+LI  L 
Sbjct: 170 LL--------------IRTYVQAR----KLREAHEAFTLLRSKGFTVSIDACNALIGSLV 211

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           + G +E+A  +++ +    +  NV T +IM+  LC DG+M+K       ++E  V P+++
Sbjct: 212 RIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIV 271

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           T++ LI  +       +  EL++ M      P     + V++ L K+
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH 318


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 227/465 (48%), Gaps = 31/465 (6%)

Query: 1   MGRVSHGF-VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +G++  G  +V  R  K C  P  V +  +I G C +  +  A     +L++ G  P V 
Sbjct: 214 LGKIEEGRRLVKDRWGKGC-VPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVE 272

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVV---------- 94
           TY  L+NG C+         L  EMA               +   ++G+V          
Sbjct: 273 TYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRM 332

Query: 95  ----CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
               C P+  TY T+I+  CK G + +A E L + K++ + PN  +YT ++  +C   D+
Sbjct: 333 AEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDY 392

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
            +A  +   + + G +P++V++   +  +  +G++D A  + + M++ GV PDA  YN L
Sbjct: 393 VKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVL 452

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           + G C  GR    K L   M     +  V+ ++ L++G+ +N E++ A+ ++  ++ KG+
Sbjct: 453 MSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGV 512

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P +V +N +  G  +  ++  A    ++M+    A D +TY T IDG  K   +  A++
Sbjct: 513 DPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALK 572

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           +F  +   K + ++  Y SLI+G CK   +  A ++FR +    LVPNVVTY+ ++GG  
Sbjct: 573 MFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFF 632

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
             G+ +KA  +F  M  N   PN  TF  LI G         +IE
Sbjct: 633 KAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIE 677



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 227/517 (43%), Gaps = 69/517 (13%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNG 67
           +VL  +      P    F++LI        +  A  LF  +R +  C P V    +L+NG
Sbjct: 112 LVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNG 171

Query: 68  LCRTSHTIVALNLFEEMA---NGNG------------------------------EFGVV 94
           L ++    VAL L+++M    +G G                               +G  
Sbjct: 172 LVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKG 231

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C P+ V Y  IIDG CK+G +  A   L ++K K + P V TY ++I GFC A ++    
Sbjct: 232 CVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVD 291

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +L  EM  +G+  NV  FN ++D   K G + +A+  +  M + G  PD  TYNT+++  
Sbjct: 292 QLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFS 351

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK----------------------- 251
           C  GR+  A E     +  G     FSY+ L++ YCK                       
Sbjct: 352 CKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDL 411

Query: 252 ------------NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
                       + EI+ AL +  +M+ KG+ PD  I+N L  GL +  +      L  E
Sbjct: 412 VSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSE 471

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M    V  D + + T +DG  +NG + EA+++F  +     +  I  YN++I G CK G+
Sbjct: 472 MLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGK 531

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +  AL     +      P+  TYS +I G      M  A  +F  M ++   PNVIT+  
Sbjct: 532 MTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTS 591

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           LI GF +  +  +  ++   MK  +++P+    + +V
Sbjct: 592 LINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLV 628



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 230/456 (50%), Gaps = 29/456 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+      L +  +    P+  ++T L+   C +   ++AA +  ++   G +PD+ +Y
Sbjct: 355 GRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSY 414

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              ++G+       VAL + E+M     E GV   P+   Y  ++ GLCK G     K L
Sbjct: 415 GAFIHGVVVHGEIDVALMVREKMM----EKGVF--PDAQIYNVLMSGLCKNGRFPAMKLL 468

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D+N++P+V  + +++ GF    + +EA ++F  ++ +GV P +V +N ++   CK
Sbjct: 469 LSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCK 528

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GKM +A   L+ M      PD +TY+T++DG+     ++ A ++F  M     K  V +
Sbjct: 529 FGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVIT 588

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LING+CK  ++  A  ++  M S  + P+VV + TL  G F+  + E+A  +F+ M 
Sbjct: 589 YTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELML 648

Query: 302 RNGVAADTWTYRTFIDGLCKNG---YIVEAVELFHTLRILKCEF-----------DIRAY 347
            NG   +  T+   I+GL        ++E  +     R L  +F            I AY
Sbjct: 649 MNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAY 708

Query: 348 NSLIDGLCKSGRLEIA-LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL--- 403
           NS+I  LCK G ++ A L L + L  G L+ + V ++ M+ GLC+ G+  + R++     
Sbjct: 709 NSVIVCLCKHGMVDTAQLLLTKMLTKGFLI-DSVCFTAMLHGLCHKGKSKEWRNIISCDL 767

Query: 404 -DMEENAVVPNVITFD-MLIRGFIRINEPSKVIELL 437
             +E    V   +T D  L +G  R++E S +++ L
Sbjct: 768 NKIELQTAVKYSLTLDKYLYQG--RLSEASVILQTL 801



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 177/373 (47%), Gaps = 5/373 (1%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C  + V +++++  L       + + +L  MK +++KP    ++++I  +  +   + A 
Sbjct: 87  CSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRAL 146

Query: 155 RLFIEMMD-QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH----GVRPDAFTYNT 209
           +LF  + +     P VV  N +++ L K+GK+D A +L D M+Q     G   D +T + 
Sbjct: 147 QLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSI 206

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           ++ G C  G++   + L       GC   V  Y+++I+GYCK  +++ A     E+  KG
Sbjct: 207 VVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKG 266

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           + P V  +  L  G  +  + E   +L  EM   G+  +   +   ID   K G + +A 
Sbjct: 267 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAA 326

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           E    +  + C  DI  YN++I+  CK GR++ A E         L+PN  +Y+ ++   
Sbjct: 327 ETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAY 386

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C  G   KA  +   + E    P+++++   I G +   E    + +  KM E  V PDA
Sbjct: 387 CKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDA 446

Query: 450 SIVSIVVDLLAKN 462
            I ++++  L KN
Sbjct: 447 QIYNVLMSGLCKN 459



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 139/323 (43%), Gaps = 59/323 (18%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +   I++    P  V + ++IKG C   ++ +A +   K++     PD +TY
Sbjct: 495 GELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTY 554

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +T+++G  +      AL +F +M           +PN +TYT++I+G CK+  + +A+++
Sbjct: 555 STVIDGYVKQHDMSSALKMFGQMMKHK------FKPNVITYTSLINGFCKKADMIRAEKV 608

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFN-------- 173
              MK  ++ PNVVTYT+++ GF  A    +A  +F  M+  G  PN  TF+        
Sbjct: 609 FRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTN 668

Query: 174 -----VIMDE------------------------------------LCKNGKMDEASRLL 192
                V+++E                                    LCK+G +D A  LL
Sbjct: 669 TATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLL 728

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M+  G   D+  +  +L G C  G+    + +     +     T   YS+ ++ Y   
Sbjct: 729 TKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYL-- 786

Query: 253 KEIEGALSLYSEMLSKGIKPDVV 275
              +G LS  S +L   I+ D V
Sbjct: 787 --YQGRLSEASVILQTLIEEDRV 807


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 137/431 (31%), Positives = 215/431 (49%), Gaps = 9/431 (2%)

Query: 12  GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
           G + +    PDA +F +LI G C + R+ E  AL T ++  G   D  T T +V   C+ 
Sbjct: 174 GMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQK 233

Query: 72  SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
                   LF  M     E G    PN V YT  IDGLCK  +V +A  +L +M  K +K
Sbjct: 234 GRFRDVSELFRRML----EMGT--PPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLK 287

Query: 132 PNVVTYTSVIRGFCYAKDWNE-AKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           PNV T+TS+I G C    W E A RLF++++     +PNV T+ V++   CK GK+  A 
Sbjct: 288 PNVYTHTSLINGLCKI-GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAE 346

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M++ G+ P+  TY TL+ G C  G  N A EL   M   G +  +++Y+ LI+G 
Sbjct: 347 MLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGL 406

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK  +I+ A  +     ++G++ D V +  +     +   +  A  LF+ M  NG   D 
Sbjct: 407 CKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDI 466

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY T I   C+   + E+ +LF     ++     + Y S+I G CK G+   AL +F  
Sbjct: 467 HTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFER 526

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +       + +TY  +I GLC + ++++AR L+  M +  +VP  +T   L   + R  +
Sbjct: 527 MVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREK 586

Query: 430 PSKVIELLHKM 440
               + +L ++
Sbjct: 587 AVVAVSILDRL 597



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 208/434 (47%), Gaps = 6/434 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++       R+ EAA +  ++R  G    V T   ++     T     A  +F+ M    
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           G       P+  ++  +I G C++G +++   LL  M+ +    +  T T ++R FC   
Sbjct: 180 GLL-----PDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKG 234

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
            + +   LF  M++ G  PNVV +   +D LCK   + +A  +L+ M+  G++P+ +T+ 
Sbjct: 235 RFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHT 294

Query: 209 TLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
           +L++G C  G    A  LF+ + +S   K  V +Y+++I GYCK  ++  A  L   M+ 
Sbjct: 295 SLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVE 354

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
           +G+ P+   + TL  G  +      AF+L ++M+R G   + +TY   IDGLCK G I E
Sbjct: 355 QGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQE 414

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A ++         + D   Y  +I   CK G +  AL+LF  +      P++ TY+ +I 
Sbjct: 415 AYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIA 474

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
             C   QM++++ LF       +VP   T+  +I G+ ++ + +  + +  +M +     
Sbjct: 475 RYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQA 534

Query: 448 DASIVSIVVDLLAK 461
           D+     ++  L K
Sbjct: 535 DSITYGALISGLCK 548



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 187/396 (47%), Gaps = 7/396 (1%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  PD  ++  L+ G CR         L   M  G G     C  N  T T I+   C++
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVM-QGQG----FCLDN-ATCTVIVRVFCQK 233

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G      EL  +M +    PNVV YT+ I G C      +A  +  EM+ +G++PNV T 
Sbjct: 234 GRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTH 293

Query: 173 NVIMDELCKNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
             +++ LCK G  + A RL L L+     +P+  TY  ++ G+C  G++  A+ L   M 
Sbjct: 294 TSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMV 353

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G      +Y+ LI+G+CK      A  L ++M  +G +P++  +N L  GL +  +++
Sbjct: 354 EQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQ 413

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A+K+       G+  D  TY   I   CK G+I  A++LF+ +    C  DI  Y +LI
Sbjct: 414 EAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLI 473

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
              C+  ++E + +LF       LVP   TY+ MI G C  G+   A  +F  M +N   
Sbjct: 474 ARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQ 533

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            + IT+  LI G  + +   +   L   M +  ++P
Sbjct: 534 ADSITYGALISGLCKESRLEEARALYEGMLDKRLVP 569



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 154/298 (51%), Gaps = 7/298 (2%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYT 62
           V   F VL  ++     P+  T TSLI GLC       A  LF KL +    +P+V TYT
Sbjct: 271 VKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 330

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++ G C+      A  L   M     E G+   PNT TYTT+I G CKEG  + A EL+
Sbjct: 331 VMIGGYCKEGKLARAEMLLGRMV----EQGLA--PNTNTYTTLISGHCKEGSFNCAFELM 384

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+ +  +PN+ TY ++I G C      EA ++     +QG+Q + VT+ V++ E CK 
Sbjct: 385 NKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQ 444

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +  A  L + M ++G  PD  TY TL+  +C   ++  +++LF    ++    T  +Y
Sbjct: 445 GHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTY 504

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +I GYCK  +   AL ++  M+  G + D + +  L  GL +  ++E A  L++ M
Sbjct: 505 TSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGM 562



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 159/330 (48%), Gaps = 9/330 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++   ++LGR+++    P+  T+T+LI G C E     A  L  K+R  G +P+++TY
Sbjct: 340 GKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTY 399

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++GLC+      A  +   MAN  G      + + VTYT +I   CK+G +  A +L
Sbjct: 400 NALIDGLCKKGKIQEAYKVL-RMANNQG-----LQLDKVTYTVMITEHCKQGHITYALDL 453

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M +    P++ TYT++I  +C  +   E+++LF + +   + P   T+  ++   CK
Sbjct: 454 FNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCK 513

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK   A R+ + M+Q+G + D+ TY  L+ G C   R+  A+ L+  M          +
Sbjct: 514 VGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVT 573

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
              L   YC+ ++   A+S+  + L K  K   V  N L   L  I  VE A     +  
Sbjct: 574 PVTLAFEYCRREKAVVAVSIL-DRLDKRRKNHTV--NVLVRKLSAIGHVEDASLFLKKAL 630

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
              +A D   Y +FI+    N     A E+
Sbjct: 631 DVDLAVDRLAYTSFINSCYANKKYALATEI 660



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 16/150 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPD 57
           +G+ +    V  R++++    D++T+ +LI GLC ESR+ EA AL+  +   R+  CE  
Sbjct: 514 VGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCE-- 571

Query: 58  VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
             T  TL    CR    +VA+++ + +                T   ++  L   G V+ 
Sbjct: 572 -VTPVTLAFEYCRREKAVVAVSILDRLDKRRKNH---------TVNVLVRKLSAIGHVED 621

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
           A   L +  D ++  + + YTS I   CYA
Sbjct: 622 ASLFLKKALDVDLAVDRLAYTSFINS-CYA 650


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/380 (33%), Positives = 200/380 (52%), Gaps = 11/380 (2%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           V   ++K    P+  TF   I GLC   ++ +A  +   ++ +G  P++ TY TL++G C
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHC 246

Query: 70  RTSHT---IVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
           +         A  + +EM AN       +C PN +T+ T+IDG CK+  V  AK    +M
Sbjct: 247 KKGSAGKMYRADAILKEMLANK------IC-PNEITFNTLIDGFCKDENVLAAKNAFEEM 299

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           + + +KPN+VTY S+I G       +EA  L+ +M+  G++PN+VTFN +++  CK   +
Sbjct: 300 QRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMI 359

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
            EA +L D + +  + P+A T+NT++D FC  G +     L  SM   G    V +Y+ L
Sbjct: 360 KEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCL 419

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I G C+N+ +  A  L +EM +  +K DVV +N L  G  +  +  +A KL  EM   GV
Sbjct: 420 IAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGV 479

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             +  TY T +DG C  G +  A+++   +       ++  YN LI G CK+G+LE A  
Sbjct: 480 KPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANR 539

Query: 366 LFRSLPCGVLVPNVVTYSIM 385
           L   +    L PN  TY ++
Sbjct: 540 LLNEMLEKGLNPNRTTYDVV 559



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 217/420 (51%), Gaps = 9/420 (2%)

Query: 39  IMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPN 98
           I  A  +F +++ +G +  + +   L++ L + + T     +++EM           +PN
Sbjct: 146 IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRR------IQPN 199

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC---YAKDWNEAKR 155
             T+   I+GLCK G ++KA++++  +K     PN+VTY ++I G C    A     A  
Sbjct: 200 LTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADA 259

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +  EM+   + PN +TFN ++D  CK+  +  A    + M + G++P+  TYN+L++G  
Sbjct: 260 ILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLS 319

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G+++ A  L+  M  +G K  + +++ LING+CK K I+ A  L+ ++  + + P+ +
Sbjct: 320 NNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAI 379

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             NT+     +   +E  F L + M   G+  +  TY   I GLC+N  +  A +L + +
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
              + + D+  YN LI G CK G    A +L   +    + PN VTY+ ++ G C +G +
Sbjct: 440 ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
             A  +   ME+     NV+T+++LI+GF +  +      LL++M E  + P+ +   +V
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 180/324 (55%), Gaps = 6/324 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  +L +   P+ +TF +LI G C +  ++ A   F +++  G +P++ TY
Sbjct: 252 GKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTY 311

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGL        A+ L+++M       G+  +PN VT+  +I+G CK+  + +A++L
Sbjct: 312 NSLINGLSNNGKLDEAIALWDKMV------GLGLKPNIVTFNALINGFCKKKMIKEARKL 365

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              + ++++ PN +T+ ++I  FC A    E   L   M+D+G+ PNV T+N ++  LC+
Sbjct: 366 FDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCR 425

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N  +  A +LL+ M  + ++ D  TYN L+ G+C  G  + A++L   M ++G K    +
Sbjct: 426 NQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVT 485

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ L++GYC    ++ AL + ++M  +G + +VV +N L  G  +  ++E A +L +EM 
Sbjct: 486 YNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEML 545

Query: 302 RNGVAADTWTYRTFIDGLCKNGYI 325
             G+  +  TY      + + G+I
Sbjct: 546 EKGLNPNRTTYDVVRLEMLEKGFI 569


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 210/410 (51%), Gaps = 47/410 (11%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++   VV  R+L    +P+ VT+T LIKGLC + RI EA  ++ ++   G EP + TY
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           ++L++G C+  +      L+E+M        +   P+ V Y  ++DGL K+G +  A   
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIK------MGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM----- 176
            ++M  ++I+ NVV + S+I G+C    ++EA ++F  M   G++P+V TF  +M     
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543

Query: 177 -DELCKNGK-----------------------------------MDEASRLLDLMIQHGV 200
            D  CK+ K                                   +++AS+  + +I+  +
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  TYNT++ G+C   R++ A+ +F  ++         + +ILI+  CKN +++GA+ 
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++S M  KG KP+ V +  L     +   +E +FKLF+EMQ  G++    +Y   IDGLC
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           K G + EA  +FH     K   D+ AY  LI G CK GRL  A  L+  +
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 223/462 (48%), Gaps = 20/462 (4%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +L  +L     P+ VTF +LI G C    +  A  LF  +   G EPD+  Y+TL++G  
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +     +   LF +  +   +  VV       +++ ID   K G +  A  +  +M  + 
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVV------VFSSTIDVYVKSGDLATASVVYKRMLCQG 386

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I PNVVTYT +I+G C      EA  ++ +++ +G++P++VT++ ++D  CK G +    
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            L + MI+ G  PD   Y  L+DG    G + HA    V M     +  V  ++ LI+G+
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF----------KLFDE 299
           C+    + AL ++  M   GIKPDV      F  +  +  +E AF          +LFD 
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVAT----FTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           MQRN ++AD       I  L K   I +A + F+ L   K E DI  YN++I G C   R
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L+ A  +F  L      PN VT +I+I  LC +  MD A  +F  M E    PN +T+  
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           L+  F +  +     +L  +M+E  + P     SI++D L K
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 243/473 (51%), Gaps = 16/473 (3%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +++  F    V+   ++KGL  + +I  A+ L + +   G  P+V T+ TL+NG C+   
Sbjct: 243 VMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              A +LF+ M     + G+  EP+ + Y+T+IDG  K G +    +L  Q   K +K +
Sbjct: 302 MDRAFDLFKVME----QRGI--EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
           VV ++S I  +  + D   A  ++  M+ QG+ PNVVT+ +++  LC++G++ EA  +  
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            +++ G+ P   TY++L+DGFC  G +     L+  M  MG    V  Y +L++G  K  
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            +  A+    +ML + I+ +VV+ N+L  G   +++ + A K+F  M   G+  D  T+ 
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535

Query: 314 TFI------DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           T +      D  CK+      ++LF  ++  K   DI   N +I  L K  R+E A + F
Sbjct: 536 TVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 595

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            +L  G + P++VTY+ MI G C+  ++D+A  +F  ++     PN +T  +LI    + 
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
           N+    I +   M E    P+A     ++D  +K   S++   SF + E+ +E
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK---SVDIEGSFKLFEEMQE 705



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/551 (23%), Positives = 234/551 (42%), Gaps = 92/551 (16%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F VLG I       D   F  L++  C    + +A  +F      G      +   ++N 
Sbjct: 133 FNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNS 190

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT-YTTIIDGLCKEGFVDKAKELLLQMK 126
           L  +    +  + F+++  G        EP+ V+ +  ++D L  +G V KA +    + 
Sbjct: 191 LIGSDRVDLIADHFDKLCRGG------IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVM 244

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           ++  +  +V+   V++G         A RL   ++D G  PNVVTF  +++  CK G+MD
Sbjct: 245 ERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS----------------- 229
            A  L  +M Q G+ PD   Y+TL+DG+   G +    +LF                   
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363

Query: 230 ------------------MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
                             M   G    V +Y+ILI G C++  I  A  +Y ++L +G++
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P +V +++L  G  +   +   F L+++M + G   D   Y   +DGL K G ++ A+  
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY------SIM 385
              +       ++  +NSLIDG C+  R + AL++FR +    + P+V T+      SIM
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543

Query: 386 IGGLCND-----------------------------------GQMDKARDLFLDMEENAV 410
               C                                      +++ A   F ++ E  +
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603

Query: 411 VPNVITFDMLIRGFI---RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
            P+++T++ +I G+    R++E  ++ ELL   K     P+   ++I++ +L KN     
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELL---KVTPFGPNTVTLTILIHVLCKNNDMDG 660

Query: 468 SLPSFTVHEQQ 478
           ++  F++  ++
Sbjct: 661 AIRMFSIMAEK 671



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 12/320 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G + H      ++L      + V F SLI G C  +R  EA  +F  + ++G +PDV T+
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534

Query: 62  TTLV------NGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           TT++      +  C+     + L LF+ M             +      +I  L K   +
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK------ISADIAVCNVVIHLLFKCHRI 588

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           + A +    + +  ++P++VTY ++I G+C  +  +EA+R+F  +      PN VT  ++
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 648

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LCKN  MD A R+  +M + G +P+A TY  L+D F  +  +  + +LF  M+  G 
Sbjct: 649 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
             ++ SYSI+I+G CK   ++ A +++ + +   + PDVV +  L  G  ++ ++  A  
Sbjct: 709 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 768

Query: 296 LFDEMQRNGVAADTWTYRTF 315
           L++ M RNGV  D    R  
Sbjct: 769 LYEHMLRNGVKPDDLLQRAL 788



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 197/444 (44%), Gaps = 46/444 (10%)

Query: 33  LCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNG-EF 91
           L  ES    A   F    + G +P   ++ T+ + L R     VA  +F+EM    G +F
Sbjct: 77  LSLESEPNSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDF 133

Query: 92  GVVCEPNTVTYTT-----IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
            V+      +        +++  C+ G VDKA E+ +      +   V+   SV R    
Sbjct: 134 NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGV---VIPQDSVYR---- 186

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
                                       +++ L  + ++D  +   D + + G+ P   +
Sbjct: 187 ----------------------------MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218

Query: 207 -YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            +  +LD     G V  A +    +   G +  + S + ++ G   + +IE A  L S +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L  G  P+VV   TL  G  +  +++RAF LF  M++ G+  D   Y T IDG  K G +
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
               +LF        + D+  ++S ID   KSG L  A  +++ + C  + PNVVTY+I+
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I GLC DG++ +A  ++  + +  + P+++T+  LI GF +         L   M ++  
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457

Query: 446 MPDASIVSIVVDLLAKNEISLNSL 469
            PD  I  ++VD L+K  + L+++
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAM 481


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 191/359 (53%), Gaps = 6/359 (1%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           +     IL+  F P    +  LI   C E  I +A  +F ++R  G  P   ++ TL+NG
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           LC++ +      L + M            P+  TY+ +I GLCKEG +D A++L  +M+ 
Sbjct: 268 LCKSRNLDEGFRLKKTMEENR------IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + ++PN +T+T++I G C ++  + A   + +M+  GV+P++V +N +++ LCK G +++
Sbjct: 322 RGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A +L+D M   G++PD  TY TL+DG+C  G +  A E+   M   G      +++ LI+
Sbjct: 382 ARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+C++  +  A     EM+  G+KPD   +  +  G  +   V+  FKL  EMQ NG   
Sbjct: 442 GFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
              TY   ++GLCK G +  A  L   +  L    D   YN L++G CK+G+ E  L+L
Sbjct: 502 GVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 185/331 (55%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P V  Y  +I  FC      +AK +F E+  +G++P  V+FN +++ LCK+  +DE  RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
              M ++ + PD FTY+ L+ G C  GR++ A++LF  M+  G +    +++ LI+G C+
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           ++ I+ A++ Y +ML+ G+KPD+V++NTL  GL ++  V +A KL DEM+  G+  D  T
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T IDG CK G +  A+E+   +       D  A+ +LI G C+ GR+  A    R + 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+  TY+++I G C  G +     L  +M+ N   P VIT+++L+ G  +  +  
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               LL  M  + V PD    +I+++   KN
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKN 551



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 195/380 (51%), Gaps = 9/380 (2%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
            ++++  +G  P V  Y  L+N  C+      A  +F E+            P TV++ T
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG------LRPTTVSFNT 263

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           +I+GLCK   +D+   L   M++  I P+V TY+ +I G C     + A++LF EM  +G
Sbjct: 264 LINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG 323

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           ++PN +TF  ++D  C++ ++D A      M+  GV+PD   YNTLL+G C  G VN A+
Sbjct: 324 LRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKAR 383

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +L   M  +G K    +Y+ LI+GYCK  ++E A+ +   M  +G+  D V    L  G 
Sbjct: 384 KLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGF 443

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               +V  A +   EM   G+  D  TY   IDG CK G +    +L   ++I   +  +
Sbjct: 444 CRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGV 503

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN L++GLCK G+++ A  L  ++    + P+ +TY+I++ G C +G   KA DL   
Sbjct: 504 ITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKL 560

Query: 405 MEENAVVPNVITFDMLIRGF 424
             E  ++ +   +  L+  +
Sbjct: 561 RNEKGLIVDYAYYTSLVSEY 580



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 179/356 (50%), Gaps = 9/356 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    ++   I K    P  V+F +LI GLC    + E   L   +      PDVFTY
Sbjct: 237 GSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTY 296

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GLC+     VA  LF+EM     + G+   PN +T+T +IDG C+   +D A   
Sbjct: 297 SVLIHGLCKEGRLDVAEQLFDEMQ----QRGL--RPNGITFTALIDGQCRSRRIDSAMNT 350

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM    +KP++V Y +++ G C   D N+A++L  EM   G++P+ +T+  ++D  CK
Sbjct: 351 YHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCK 410

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++ A  +   M + GV  D   +  L+ GFC  GRV  A+     M   G K    +
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+++I+GYCK   ++    L  EM   G KP V+ +N L  GL +  Q++ A  L + M 
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAML 530

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
             GV  D  TY   ++G CKNG   + ++L +   ++    D   Y SL+    KS
Sbjct: 531 NLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLI---VDYAYYTSLVSEYNKS 583



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 157/329 (47%), Gaps = 11/329 (3%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N   ++ T+    + +C   ++  A ++F E        +++ F V      + GK   A
Sbjct: 89  NWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQ------SIIRFLV-----SRKGKDSAA 137

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           S    ++   G R   F ++ L+  +  +G V+ A + F  + +   +        L++ 
Sbjct: 138 SVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDK 197

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
              +       + YSE+L  G  P V  +N L     +   +  A  +F+E+++ G+   
Sbjct: 198 MINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPT 257

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T ++ T I+GLCK+  + E   L  T+   +   D+  Y+ LI GLCK GRL++A +LF 
Sbjct: 258 TVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFD 317

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L PN +T++ +I G C   ++D A + +  M    V P+++ ++ L+ G  ++ 
Sbjct: 318 EMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVG 377

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + +K  +L+ +M+ + + PD    + ++D
Sbjct: 378 DVNKARKLVDEMRMVGMKPDKITYTTLID 406


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 209/466 (44%), Gaps = 46/466 (9%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS-HTIVALNL 80
           D+  F  LI          +A   F +++ F C PDVFTY  ++  + R     ++A  +
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + EM   N      C PN  T+  ++DGL K+G    A+++   M  + I PN VTYT +
Sbjct: 186 YNEMLKCN------CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTIL 239

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C     ++A++LF EM   G  P+ V  N ++D  CK G+M EA  LL L  + G 
Sbjct: 240 ISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGF 299

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
                 Y++L+DG     R   A EL+ +M     K  +  Y+ILI G  K  +IE AL 
Sbjct: 300 VLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALK 359

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L S M SKGI PD   +N +   L     +E    L  EM       D  T+   I  +C
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV---- 376
           +NG + EA E+F  +    C   +  +N+LIDGLCKSG L+ A  L   +  G       
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479

Query: 377 -----------------------------------PNVVTYSIMIGGLCNDGQMDKARDL 401
                                              P++V+Y+++I G C  G +D A  L
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
              ++   + P+ +T++ LI G  R+    +  +L +   +    P
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP 585



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 204/413 (49%), Gaps = 12/413 (2%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F V   +LK   +P+  TF  L+ GL  + R  +A  +F  +   G  P+  TYT L++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GLC+      A  LF EM   +G +     P++V +  ++DG CK G + +A ELL   +
Sbjct: 242 GLCQRGSADDARKLFYEMQT-SGNY-----PDSVAHNALLDGFCKLGRMVEAFELLRLFE 295

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
                  +  Y+S+I G   A+ + +A  L+  M+ + ++P+++ + +++  L K GK++
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A +LL  M   G+ PD + YN ++   C  G +   + L + M          +++ILI
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
              C+N  +  A  +++E+   G  P V   N L  GL +  +++ A  L  +M+    A
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPA 475

Query: 307 A-----DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +          R+F D + ++G I++A              DI +YN LI+G C++G ++
Sbjct: 476 SLFLRLSHSGNRSF-DTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDID 534

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            AL+L   L    L P+ VTY+ +I GL   G+ ++A  LF   ++    P V
Sbjct: 535 GALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV 587



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 221/510 (43%), Gaps = 96/510 (18%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT-----YTTLVNGLCRTSHTI 75
           PD+V   +L+ G C   R++EA   F  LR+F  E D F      Y++L++GL R     
Sbjct: 266 PDSVAHNALLDGFCKLGRMVEA---FELLRLF--EKDGFVLGLRGYSSLIDGLFRARRYT 320

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  L+  M   N       +P+ + YT +I GL K G ++ A +LL  M  K I P+  
Sbjct: 321 QAFELYANMLKKN------IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTY 374

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
            Y +VI+  C      E + L +EM +    P+  T  +++  +C+NG + EA  +   +
Sbjct: 375 CYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEI 434

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME------------------------ 231
            + G  P   T+N L+DG C +G +  A+ L   ME                        
Sbjct: 435 EKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVE 494

Query: 232 ---------------SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
                            G    + SY++LING+C+  +I+GAL L + +  KG+ PD V 
Sbjct: 495 SGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVT 554

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTL 335
           +NTL  GL  + + E AFKLF    ++        YR+ +   C+   ++ A  L+   L
Sbjct: 555 YNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYL 612

Query: 336 RILKC--------------------------EFDIR-------AYNSLIDGLCKSGRLEI 362
           + + C                          E D R        Y   + GLC+SGR   
Sbjct: 613 KKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHE 672

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN--AVVPNVITFDML 420
           AL +F  L    ++    +   +I GLC   Q+D A ++FL   +N   ++P V  +  L
Sbjct: 673 ALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNY--L 730

Query: 421 IRGFIRINEPSKVI-ELLHKMKEINVMPDA 449
           +   +   E  +++ +L ++M+      D+
Sbjct: 731 LSSLLESTEKMEIVSQLTNRMERAGYNVDS 760



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 178/371 (47%), Gaps = 12/371 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S    +   +     +P+ VT+T LI GLC      +A  LF +++  G  PD   +
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++G C+    + A  L           G+        Y+++IDGL +     +A EL
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGL------RGYSSLIDGLFRARRYTQAFEL 325

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  KNIKP+++ YT +I+G   A    +A +L   M  +G+ P+   +N ++  LC 
Sbjct: 326 YANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCG 385

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++E   L   M +    PDA T+  L+   C  G V  A+E+F  +E  GC  +V +
Sbjct: 386 RGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVAT 445

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH-----NTLFVGLFEIHQVERAFKL 296
           ++ LI+G CK+ E++ A  L  +M   G    + +      N  F  + E   + +A++ 
Sbjct: 446 FNALIDGLCKSGELKEARLLLHKM-EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRD 504

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
                  G + D  +Y   I+G C+ G I  A++L + L++     D   YN+LI+GL +
Sbjct: 505 LAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHR 564

Query: 357 SGRLEIALELF 367
            GR E A +LF
Sbjct: 565 VGREEEAFKLF 575



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 184/404 (45%), Gaps = 48/404 (11%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R +  F +   +LK    PD + +T LI+GL    +I +A  L + +   G  PD + Y 
Sbjct: 318 RYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYN 377

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++  LC         +L  EM+           P+  T+T +I  +C+ G V +A+E+ 
Sbjct: 378 AVIKALCGRGLLEEGRSLQLEMSETESF------PDACTHTILICSMCRNGLVREAEEIF 431

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM---------------------- 160
            +++     P+V T+ ++I G C + +  EA+ L  +M                      
Sbjct: 432 TEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDT 491

Query: 161 -----------------MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
                             D G  P++V++NV+++  C+ G +D A +LL+++   G+ PD
Sbjct: 492 MVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPD 551

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
           + TYNTL++G    GR   A +LF + +    +H+   Y  L+   C+ +++  A +L+ 
Sbjct: 552 SVTYNTLINGLHRVGREEEAFKLFYAKDDF--RHSPAVYRSLMTWSCRKRKVLVAFNLWM 609

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           + L K    D    N +    F+  + ERA +   E+           Y  ++ GLC++G
Sbjct: 610 KYLKKISCLDDETANEI-EQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSG 668

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
              EA+ +F  LR  K      +   LI GLCK  +L+ A+E+F
Sbjct: 669 RFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 174/362 (48%), Gaps = 1/362 (0%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           +  +ID L ++   D   + L ++K   +  +   +  +I  +       +A   F  M 
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDE-ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +   +P+V T+NVI+  + +       A  + + M++    P+ +T+  L+DG    GR 
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A+++F  M   G      +Y+ILI+G C+    + A  L+ EM + G  PD V HN L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             G  ++ ++  AF+L    +++G       Y + IDGL +     +A EL+  +     
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + DI  Y  LI GL K+G++E AL+L  S+P   + P+   Y+ +I  LC  G +++ R 
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L L+M E    P+  T  +LI    R     +  E+  ++++    P  +  + ++D L 
Sbjct: 395 LQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLC 454

Query: 461 KN 462
           K+
Sbjct: 455 KS 456


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 222/443 (50%), Gaps = 6/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T++ L+        +     L  ++   G +P+V++YT  +  L +      A  +
Sbjct: 228 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRI 287

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M N        C+P+ +T+T +I  LC  G +  AK++  +MK  + KP+ VTY ++
Sbjct: 288 LAKMENEG------CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 341

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  F    D      ++  M   G   NVV +  ++D LC+ G++ EA  + D M Q G+
Sbjct: 342 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 401

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+ ++YN+L+ GF    R   A ELF  M+  G K   +++ + IN Y K+ E   A+ 
Sbjct: 402 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 461

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            Y  M SKGI PDVV  N +  GL +  ++  A ++F E++  GV+ DT TY   I    
Sbjct: 462 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 521

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K     EAV++F+ +    C  D+ A NSLID L K+GR + A  +F  L    L P   
Sbjct: 522 KASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDG 581

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ GL  +G++ +   L  +M  +   PN+IT++ ++    +    +  +++L+ M
Sbjct: 582 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 641

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
                +PD S  + V+  L K E
Sbjct: 642 TTKGCIPDLSSYNTVIYGLVKEE 664



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 224/446 (50%), Gaps = 6/446 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     V   + +     +  TF ++  GL  E  +  A      ++  G   + +TY
Sbjct: 139 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 198

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV  L ++     AL ++  M       GVV  P+  TY+ ++    K   V+    L
Sbjct: 199 NGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVLWL 252

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   +KPNV +YT  IR    AK ++EA R+  +M ++G +P+V+T  V++  LC 
Sbjct: 253 LREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCD 312

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ +A  +   M +   +PD  TY TLLD F   G      E++ +M++ G    V +
Sbjct: 313 AGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVA 372

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+  C+   +  AL ++ EM  KGI P+   +N+L  G  +  +   A +LF  M 
Sbjct: 373 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 432

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   + +T+  FI+   K+G  ++A++ +  ++      D+ A N+++ GL KSGRL 
Sbjct: 433 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 492

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A  +F  L    + P+ +TY++MI       + D+A  +F DM EN  VP+V+  + LI
Sbjct: 493 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 552

Query: 422 RGFIRINEPSKVIELLHKMKEINVMP 447
               +     +   + +++KE+N+ P
Sbjct: 553 DTLYKAGRGDEAWRIFYQLKEMNLEP 578



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 230/448 (51%), Gaps = 12/448 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R    + +L ++      PD +T T LI+ LC   RI +A  +F K++    +PD  TY 
Sbjct: 280 RFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI 339

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TL++       +   + ++  M A+G  +       N V YT +ID LC+ G V +A E+
Sbjct: 340 TLLDKFGDNGDSQSVMEIWNAMKADGYND-------NVVAYTAVIDALCQVGRVFEALEM 392

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK K I P   +Y S+I GF  A  + +A  LF  M   G +PN  T  + ++   K
Sbjct: 393 FDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGK 452

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+  +A +  +LM   G+ PD    N +L G   +GR+  AK +F  +++MG      +
Sbjct: 453 SGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTIT 512

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+++I    K  + + A+ ++ +M+     PDV+  N+L   L++  + + A+++F +++
Sbjct: 513 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 572

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +     TY T + GL + G + E + L   +       ++  YN+++D LCK+G + 
Sbjct: 573 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 632

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL++  S+     +P++ +Y+ +I GL  + + ++A  +F  M++  ++P+  T   ++
Sbjct: 633 DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYATLCTIL 691

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA 449
             F++I     + E LH +K+  + P +
Sbjct: 692 PSFVKIG---LMKEALHIIKDYFLQPGS 716



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 209/438 (47%), Gaps = 8/438 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +   SLI  L    R  EA  +F +L+    EP   TY TL+ GL R       ++L
Sbjct: 543 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 602

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            EEM + N        PN +TY TI+D LCK G V+ A ++L  M  K   P++ +Y +V
Sbjct: 603 LEEMYHSN------YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 656

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHG 199
           I G    + +NEA  +F +M  + + P+  T   I+    K G M EA  ++ D  +Q G
Sbjct: 657 IYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPG 715

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            + D  + ++L++G      +  + E    + S G     F    LI   CK K+   A 
Sbjct: 716 SKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 775

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  +  S G+     ++N+L  GL + + ++ A  LF EM+  G   D +TY   +D +
Sbjct: 776 ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 835

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K+  I E +++   +     E     YN++I GL KS RLE A++L+ +L      P  
Sbjct: 836 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 895

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY  ++ GL   G+++ A +LF +M E     N   +++L+ G        KV  L   
Sbjct: 896 CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 955

Query: 440 MKEINVMPDASIVSIVVD 457
           M +  + PD    +I++D
Sbjct: 956 MVDQGINPDIKSYTIIID 973



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 214/477 (44%), Gaps = 44/477 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +   + +    P+  ++ SLI G     R  +A  LF  + + G +P+ +T
Sbjct: 383 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYT 442

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +   +N   ++  +I A+  +E M +     G+V  P+ V    ++ GL K G +  AK 
Sbjct: 443 HVLFINYYGKSGESIKAIQRYELMKSK----GIV--PDVVAGNAVLFGLAKSGRLGMAKR 496

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  ++K   + P+ +TYT +I+    A  ++EA ++F +M++    P+V+  N ++D L 
Sbjct: 497 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 556

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+ DEA R+   + +  + P   TYNTLL G    G+V     L   M        + 
Sbjct: 557 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 616

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +++  CKN  +  AL +   M +KG  PD+  +NT+  GL +  +   AF +F +M
Sbjct: 617 TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 676

Query: 301 QR-----------------------------------NGVAADTWTYRTFIDGLCKNGYI 325
           ++                                    G   D  +  + ++G+ K   I
Sbjct: 677 KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI 736

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +++E    +       D      LI  LCK  +   A EL +      +      Y+ +
Sbjct: 737 EKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSL 796

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF---IRINEPSKVIELLHK 439
           I GL ++  +D A  LF +M+E    P+  T+++L+      +RI E  KV E +H+
Sbjct: 797 ICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 853



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 205/448 (45%), Gaps = 20/448 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V   +++ GL    R+  A  +F +L+  G  PD  TYT ++    + S    A+ +
Sbjct: 473 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 532

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M   N      C P+ +   ++ID L K G  D+A  +  Q+K+ N++P   TY ++
Sbjct: 533 FYDMIENN------CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTL 586

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G        E   L  EM      PN++T+N I+D LCKNG +++A  +L  M   G 
Sbjct: 587 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 646

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL---INGYCKNKEIEG 257
            PD  +YNT++ G     R N A  +F  M+    K  +  Y+ L   +  + K   ++ 
Sbjct: 647 IPDLSSYNTVIYGLVKEERYNEAFSIFCQMK----KVLIPDYATLCTILPSFVKIGLMKE 702

Query: 258 ALSLYSE-MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
           AL +  +  L  G K D    ++L  G+ +   +E++ +  + +  +G+  D +     I
Sbjct: 703 ALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLI 762

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF---RSLPCG 373
             LCK    +EA EL    +          YNSLI GL     ++IA  LF   + L CG
Sbjct: 763 KHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG 822

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P+  TY++++  +    ++++   +  +M         +T++ +I G ++     + 
Sbjct: 823 ---PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 879

Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
           I+L + +      P       ++D L K
Sbjct: 880 IDLYYNLMSQGFSPTPCTYGPLLDGLLK 907



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 188/406 (46%), Gaps = 11/406 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S    V  ++ KS   PD VT+ +L+              ++  ++  G   +V  Y
Sbjct: 314 GRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAY 373

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +++ LC+      AL +F+EM     + G+V  P   +Y ++I G  K      A EL
Sbjct: 374 TAVIDALCQVGRVFEALEMFDEMK----QKGIV--PEQYSYNSLISGFLKADRFGDALEL 427

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M     KPN  T+   I  +  + +  +A + +  M  +G+ P+VV  N ++  L K
Sbjct: 428 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 487

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++  A R+   +   GV PD  TY  ++       + + A ++F  M    C   V +
Sbjct: 488 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 547

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            + LI+   K    + A  ++ ++    ++P    +NTL  GL    +V+    L +EM 
Sbjct: 548 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 607

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +    +  TY T +D LCKNG + +A+++ +++    C  D+ +YN++I GL K  R  
Sbjct: 608 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYN 667

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA----RDLFL 403
            A  +F  +   VL+P+  T   ++      G M +A    +D FL
Sbjct: 668 EAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 712



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 177/393 (45%), Gaps = 24/393 (6%)

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R +HT  + N   E+  G+G  G + E   V                        M+ + 
Sbjct: 120 RVAHTTASCNYMLELMRGHGRVGDMAEVFDV------------------------MQRQI 155

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +K NV T+ ++  G         A      M + G+  N  T+N ++  L K+G   EA 
Sbjct: 156 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 215

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +  +M+  GV P   TY+ L+  F     V     L   ME+ G K  V+SY+I I   
Sbjct: 216 EVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVL 275

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            + K  + A  + ++M ++G KPDV+ H  L   L +  ++  A  +F +M+++    D 
Sbjct: 276 GQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDR 335

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY T +D    NG     +E+++ ++      ++ AY ++ID LC+ GR+  ALE+F  
Sbjct: 336 VTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE 395

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    +VP   +Y+ +I G     +   A +LF  M+ +   PN  T  + I  + +  E
Sbjct: 396 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 455

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             K I+    MK   ++PD    + V+  LAK+
Sbjct: 456 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 488



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 181/393 (46%), Gaps = 22/393 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  +  S + P+ +T+ +++  LC    + +A  +   +   GC PD+ +Y
Sbjct: 594 GKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSY 653

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ GL +      A ++F +M         V  P+  T  TI+    K G +   KE 
Sbjct: 654 NTVIYGLVKEERYNEAFSIFCQMKK-------VLIPDYATLCTILPSFVKIGLM---KEA 703

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE--------MMDQGVQPNVVTFN 173
           L  +KD  ++P     +   R  C++      K+  IE        +   G+  +     
Sbjct: 704 LHIIKDYFLQPG----SKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLC 759

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            ++  LCK  K  EA  L+      GV      YN+L+ G      ++ A+ LF  M+ +
Sbjct: 760 PLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL 819

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GC    F+Y++L++   K+  IE  L +  EM  KG +   V +NT+  GL +  ++E+A
Sbjct: 820 GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 879

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             L+  +   G +    TY   +DGL K G I +A  LF+ +    C+ +   YN L++G
Sbjct: 880 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 939

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
              +G  E    LF+ +    + P++ +Y+I+I
Sbjct: 940 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 175/371 (47%), Gaps = 10/371 (2%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTS-------VIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            D   E L + +    KP V   T+       ++RG     D  E   +F  M  Q V+ 
Sbjct: 102 ADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAE---VFDVMQRQIVKA 158

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           NV TF  I   L   G +  A   L +M + G+  +A+TYN L+     +G    A E++
Sbjct: 159 NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY 218

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G   +V +YS+L+  + K +++E  L L  EM + G+KP+V  +      L + 
Sbjct: 219 RVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQA 278

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            + + A+++  +M+  G   D  T+   I  LC  G I +A ++F  ++    + D   Y
Sbjct: 279 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 338

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +L+D    +G  +  +E++ ++       NVV Y+ +I  LC  G++ +A ++F +M++
Sbjct: 339 ITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 398

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
             +VP   +++ LI GF++ +     +EL   M      P+     + ++   K+  S+ 
Sbjct: 399 KGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIK 458

Query: 468 SLPSFTVHEQQ 478
           ++  + + + +
Sbjct: 459 AIQRYELMKSK 469



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/320 (20%), Positives = 133/320 (41%), Gaps = 35/320 (10%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V     + N +++ +  +G++ + + + D+M +  V+ +  T+  +  G  + G +  A 
Sbjct: 121 VAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAP 180

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
                M+  G     ++Y+ L+    K+     AL +Y  M+  G+ P V  ++ L V  
Sbjct: 181 VALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAF 240

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +   VE    L  EM+ +GV  + ++Y   I  L +     EA  +   +    C+   
Sbjct: 241 GKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK--- 297

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
                                           P+V+T++++I  LC+ G++  A+D+F  
Sbjct: 298 --------------------------------PDVITHTVLIQVLCDAGRISDAKDVFWK 325

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M+++   P+ +T+  L+  F    +   V+E+ + MK      +    + V+D L +   
Sbjct: 326 MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 385

Query: 465 SLNSLPSFTVHEQQEEVDES 484
              +L  F   +Q+  V E 
Sbjct: 386 VFEALEMFDEMKQKGIVPEQ 405


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 245/543 (45%), Gaps = 102/543 (18%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL---------- 68
           F PD VT++S++ GLC + R+ EA  L  +++  G +P+   YTTL++ L          
Sbjct: 269 FLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAF 328

Query: 69  -CRTSHTIVALNL--------------------FEEMANGNGEFGVVCEPNTVTYTTIID 107
            C++   +  + L                     E+M     +  ++  PN++TYT +ID
Sbjct: 329 ACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLI--PNSITYTALID 386

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
           G CK G +++ + LL +M++K+I PNV+TY+S+I G+      +EA  +  +M+DQ + P
Sbjct: 387 GYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIP 446

Query: 168 NVVTFNVIMDELCKNGK-----------------------------------MDEASRLL 192
           N   + +++D  CK GK                                   MDEA  LL
Sbjct: 447 NAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELL 506

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVN------------------------------- 221
             +   G+  D   Y +L+DGF   G+ +                               
Sbjct: 507 KDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEH 566

Query: 222 ---HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
               AK ++  M  MG      +Y+I+I  YCK  E++ AL L++EM S  I P  +  N
Sbjct: 567 GKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCN 626

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           TL VGL E  ++E+A  + +EM   G+  +   +R  ++   K+G     +++   L  +
Sbjct: 627 TLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDM 686

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             + +  AYN+LI   C+    + A  + + +     V + VTY+ +I G C    + KA
Sbjct: 687 GLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKA 746

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
              +  M    V PN++T+++L+ G +     ++  EL  KMKE  + PDAS    ++  
Sbjct: 747 LATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISG 806

Query: 459 LAK 461
             K
Sbjct: 807 YGK 809



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 236/456 (51%), Gaps = 10/456 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D +T+T++I   C +  + EA AL+ ++ + G  PDV TY+++VNGLC+      A  L 
Sbjct: 237 DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM     + GV  +PN V YTT+ID L K G   +A     Q+  + +  ++V  T+++
Sbjct: 297 REMK----KMGV--DPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLV 350

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G   +    EA+ +F  +    + PN +T+  ++D  CK G M+    LL  M +  + 
Sbjct: 351 DGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHIN 410

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TY+++++G+   G ++ A  +   M         + Y+ILI+GYCK  + E A  L
Sbjct: 411 PNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDL 470

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           Y+EM   G+K + V+ + L   L    +++ A +L  ++   G+  D   Y + +DG  K
Sbjct: 471 YNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFK 530

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G    A+ +   +      FD+  YN LI+GL + G+ E A  ++  +    L PN  T
Sbjct: 531 AGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQAT 589

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+IMI   C  G++D A +L+ +M+ + ++P+ IT + L+ G     E  K + +L++M 
Sbjct: 590 YNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMS 649

Query: 442 EINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
            + + P+  I  ++++  +K   S  +     +HEQ
Sbjct: 650 VMGIHPNLVIHRVLLNASSK---SGKANAVLQMHEQ 682



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 246/531 (46%), Gaps = 57/531 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G   +G  ++  ++      D + F +LI G C    +  A  L  ++R  G   D+ +
Sbjct: 125 IGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVS 184

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNG---------------EFGVVCEPNTVTYTTI 105
           Y TL+NG C+      A +L  E++   G               +  +  E + +TYTTI
Sbjct: 185 YNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTI 244

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I   CK+  +++A+ L  +M      P+VVTY+S++ G C     +EA+ L  EM   GV
Sbjct: 245 ISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGV 304

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
            PN V +  ++D L K G   EA      ++  G+  D     TL+DG   + +   A++
Sbjct: 305 DPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAED 364

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +F ++  +       +Y+ LI+GYCK  ++E   SL  EM  K I P+V+ ++++  G  
Sbjct: 365 MFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYT 424

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI--LKCE-- 341
           +   ++ A  +  +M    +  + + Y   IDG CK G    A +L++ +++  LK    
Sbjct: 425 KKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNV 484

Query: 342 -FDIRA------------------------------YNSLIDGLCKSGRLEIALELFRSL 370
            FD+                                Y SL+DG  K+G+   AL +   +
Sbjct: 485 LFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEM 544

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               +  +VVTY+++I GL   G+ + A+ ++  M E  + PN  T++++I+ + +  E 
Sbjct: 545 TEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGEL 603

Query: 431 SKVIELLHKMKEINVMPDA-SIVSIVVDLLAKNEIS-----LNSLPSFTVH 475
              +EL ++MK   +MP + +  ++VV L    EI      LN +    +H
Sbjct: 604 DNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIH 654



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 234/503 (46%), Gaps = 69/503 (13%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K    P  + +  LI    A   + +   ++T++      P+V+T+  LV+  C+  + I
Sbjct: 3   KHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLI 62

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
           +AL+L            V  E +TVTY T+I G C+ G V++A   L  M  K+   + +
Sbjct: 63  LALDLLR---------NVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTI 113

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           T   +++GFC        +R+   ++  G   +V+ FN ++D  CK G+M  A  L++ M
Sbjct: 114 TCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERM 173

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVF-------------- 240
            + G+  D  +YNTL++GFC  G  + AK L   + ES G K +VF              
Sbjct: 174 RKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLN 233

Query: 241 ------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
                 +Y+ +I+ YCK   +E A +LY EM+  G  PDVV ++++  GL +  ++  A 
Sbjct: 234 LEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQ 293

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE-----------------------L 331
           +L  EM++ GV  +   Y T ID L K G   EA                         L
Sbjct: 294 ELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGL 353

Query: 332 FHTLRILKCEFDIRA------------YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           F + +  + E   RA            Y +LIDG CK G +E    L + +    + PNV
Sbjct: 354 FKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNV 413

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +TYS +I G    G +D+A ++   M +  ++PN   + +LI G+ +  +     +L ++
Sbjct: 414 ITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNE 473

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           MK    +    + +++ D+L  N
Sbjct: 474 MK----LSGLKVNNVLFDVLVNN 492



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 231/481 (48%), Gaps = 31/481 (6%)

Query: 2   GRVSHGFVVLGRILK--SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           G V+  F  L  ++K  +CF  D +T   L+KG C          +   L   G   DV 
Sbjct: 91  GLVNQAFGFLSIMVKKDTCF--DTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVI 148

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
            + TL++G C+     +AL+L E M     + G++ +   V+Y T+I+G CK G  DKAK
Sbjct: 149 GFNTLIDGYCKAGEMSLALDLVERMR----KEGLLSD--IVSYNTLINGFCKRGEYDKAK 202

Query: 120 ELLLQMKDK---------------------NIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
            LL ++ +                      N++ +++TYT++I  +C      EA+ L+ 
Sbjct: 203 SLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYE 262

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           EM+  G  P+VVT++ I++ LCK+G++ EA  LL  M + GV P+   Y TL+D     G
Sbjct: 263 EMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAG 322

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
               A      +   G    +   + L++G  K+ + + A  ++  +    + P+ + + 
Sbjct: 323 SAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYT 382

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L  G  ++  +ER   L  EM+   +  +  TY + I+G  K G + EA+ +   +   
Sbjct: 383 ALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQ 442

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
               +   Y  LIDG CK+G+ EIA +L+  +    L  N V + +++  L    +MD+A
Sbjct: 443 NIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEA 502

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            +L  D+    ++ + + +  L+ GF +  + S  + ++ +M E ++  D    +++++ 
Sbjct: 503 EELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLING 562

Query: 459 L 459
           L
Sbjct: 563 L 563



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 221/455 (48%), Gaps = 7/455 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     V+ ++L     P+A  +  LI G C   +   A  L+ ++++ G + +   +
Sbjct: 427 GILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLF 486

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LVN L R      A  L +++ +     G++ +   V YT+++DG  K G    A  +
Sbjct: 487 DVLVNNLKRGKRMDEAEELLKDVTSR----GLLLDH--VNYTSLMDGFFKAGKESAALNM 540

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M +K+I  +VVTY  +I G      + EAK ++  M++ G+ PN  T+N+++   CK
Sbjct: 541 VEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCK 599

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D A  L + M  H + P + T NTL+ G    G +  A  +   M  MG    +  
Sbjct: 600 QGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVI 659

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           + +L+N   K+ +    L ++ +++  G+K +   +N L V    +   ++A  +   M 
Sbjct: 660 HRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMI 719

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           R+G  ADT TY   I G C++ ++ +A+  +  +       +I  YN L+ GL  +G + 
Sbjct: 720 RDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMA 779

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
              ELF  +    L P+  TY  +I G    G   ++  L+ +M     VP   T+++LI
Sbjct: 780 ERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLI 839

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
             F ++ +  +  ELL++M+   V P +S   I++
Sbjct: 840 SDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI 874



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 194/389 (49%), Gaps = 24/389 (6%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           PN  T+  ++   CK G +  A +LL   ++ +++ + VTY +VI GFC     N+A   
Sbjct: 43  PNVYTHNVLVHAWCKMGNLILALDLL---RNVDVEVDTVTYNTVIWGFCQHGLVNQAFGF 99

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M+ +    + +T N+++   C+ G      R++D ++  G   D   +NTL+DG+C 
Sbjct: 100 LSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCK 159

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML-SKGIK---- 271
            G ++ A +L   M   G    + SY+ LING+CK  E + A SL  E+  S+G+K    
Sbjct: 160 AGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVF 219

Query: 272 ----------------PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
                            D++ + T+     + H +E A  L++EM  NG   D  TY + 
Sbjct: 220 FNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSI 279

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           ++GLCK+G + EA EL   ++ +  + +  AY +LID L K+G    A      L    +
Sbjct: 280 VNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGM 339

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
             ++V  + ++ GL    +  +A D+F  + +  ++PN IT+  LI G+ ++ +  +V  
Sbjct: 340 TLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVES 399

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           LL +M+E ++ P+    S +++   K  I
Sbjct: 400 LLQEMEEKHINPNVITYSSIINGYTKKGI 428



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 99/237 (41%), Gaps = 53/237 (22%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAA------------------------- 44
           VL  +++  F  D VT+ +LI+G C  S + +A A                         
Sbjct: 714 VLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLL 773

Query: 45  ----------LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
                     LF K++  G  PD  TY TL++G  +  +   ++ L+ EM       G V
Sbjct: 774 GAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQ----GFV 829

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW---- 150
             P T TY  +I    K G +D+A+ELL +M+ + + P+  TY  +I G+C         
Sbjct: 830 --PKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLD 887

Query: 151 --------NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
                    +AK L  EM D+G  P   T   I     + GKM +A +LL  +  H 
Sbjct: 888 RTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEIFSHA 944


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 130/386 (33%), Positives = 200/386 (51%), Gaps = 9/386 (2%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
            S  +     IL   + PD   F  L+  LC E +I EA  LF ++   G  P V ++ T
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+NG C++ +      L   M   N  F     P+  TY+ +I+GLCKEG +D A +L L
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMME-NRVF-----PDVFTYSVLINGLCKEGQLDDANKLFL 319

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M D+ + PN VT+T++I G C     +    ++ +M+ +GV+P+V+T+N +++ LCK G
Sbjct: 320 EMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVG 379

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            + EA +L+  M Q G++PD FTY  L+DG C  G +  A E+   M   G +    +++
Sbjct: 380 DLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFT 439

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G+C+  ++  A     EML  GIKPD   +  +  G  +   V+  FKL  EMQ +
Sbjct: 440 ALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCD 499

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G      TY   ++GLCK G +  A  L   +  L    D   YN L++G CK G  E  
Sbjct: 500 GHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDF 559

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGL 389
            +L        LV +  +Y+ +IG L
Sbjct: 560 DKLQSE---KGLVQDYGSYTSLIGDL 582



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 183/330 (55%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P+   +  ++  LCKE  +++A+ L  ++  + ++P VV++ ++I G+C + + ++  RL
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              MM+  V P+V T++V+++ LCK G++D+A++L   M   G+ P+  T+ TL++G C+
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           TGR +   E++  M   G K  V +Y+ LING CK  ++  A  L  EM  +G+KPD   
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +  L  G  +   +E A ++  EM + G+  D   +   I G C+ G ++EA      + 
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               + D   Y  +I G CK G ++   +L + + C   VP VVTY++++ GLC  GQM 
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMK 522

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            A  L   M    VVP+ IT+++L+ G  +
Sbjct: 523 NANMLLDAMLNLGVVPDDITYNILLEGHCK 552



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 202/383 (52%), Gaps = 15/383 (3%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVT 101
           A A + ++   G  PDV  +  L++ LC+      A  LF E+    G+ G+   P  V+
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI----GKRGL--RPTVVS 262

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           + T+I+G CK G +D+   L   M +  + P+V TY+ +I G C     ++A +LF+EM 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           D+G+ PN VTF  +++  C  G+ D    +   M++ GV+PD  TYNTL++G C  G + 
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            AK+L + M   G K   F+Y++LI+G CK  ++E AL +  EM+ +GI+ D V    L 
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G     QV  A +   EM   G+  D  TY   I G CK G +    +L   L+ ++C+
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKL---LKEMQCD 499

Query: 342 FDIRA---YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
             +     YN L++GLCK G+++ A  L  ++    +VP+ +TY+I++ G C  G  +  
Sbjct: 500 GHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDF 559

Query: 399 RDLFLDMEENAVVPNVITFDMLI 421
             L     E  +V +  ++  LI
Sbjct: 560 DKL---QSEKGLVQDYGSYTSLI 579



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 219/431 (50%), Gaps = 7/431 (1%)

Query: 28  SLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
           SL++ + +      A+++FT  L   G       ++ L+N    + +   A+  F  +  
Sbjct: 124 SLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
            N +       ++  Y  + D L K      A     ++ D    P+V  +  ++   C 
Sbjct: 184 HNLQIPF----HSCGY--LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCK 237

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
               NEA+ LF E+  +G++P VV+FN +++  CK+G +D+  RL   M+++ V PD FT
Sbjct: 238 EHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFT 297

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           Y+ L++G C  G+++ A +LF+ M   G      +++ LING+C     +  + +Y +ML
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            KG+KPDV+ +NTL  GL ++  +  A KL  EM + G+  D +TY   IDG CK G + 
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLE 417

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            A+E+   +     E D  A+ +LI G C+ G++  A    R +    + P+  TY+++I
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G C  G +     L  +M+ +  VP V+T+++L+ G  +  +      LL  M  + V+
Sbjct: 478 HGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVV 537

Query: 447 PDASIVSIVVD 457
           PD    +I+++
Sbjct: 538 PDDITYNILLE 548



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 188/358 (52%), Gaps = 15/358 (4%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL---FTKLRVFGCEPDVF 59
           +++   ++ G I K    P  V+F +LI G C    + +   L     + RVF   PDVF
Sbjct: 240 KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF---PDVF 296

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TY+ L+NGLC+      A  LF EM +     G+V  PN VT+TT+I+G C  G  D   
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDR----GLV--PNDVTFTTLINGHCVTGRADLGM 350

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E+  QM  K +KP+V+TY ++I G C   D  EAK+L IEM  +G++P+  T+ +++D  
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G ++ A  +   M++ G+  D   +  L+ GFC  G+V  A+     M   G K   
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+++I+G+CK  +++    L  EM   G  P VV +N L  GL +  Q++ A  L D 
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           M   GV  D  TY   ++G CK+G   +  +L     +++   D  +Y SLI  L K+
Sbjct: 531 MLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSEKGLVQ---DYGSYTSLIGDLRKT 585



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 177/321 (55%), Gaps = 11/321 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  GF +   ++++   PD  T++ LI GLC E ++ +A  LF ++   G  P+  T+
Sbjct: 274 GNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL+NG C T    + + ++++M       GV  +P+ +TY T+I+GLCK G + +AK+L
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRK----GV--KPDVITYNTLINGLCKVGDLREAKKL 387

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +++M  + +KP+  TYT +I G C   D   A  +  EM+ +G++ + V F  ++   C+
Sbjct: 388 VIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCR 447

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA R L  M++ G++PD  TY  ++ GFC  G V    +L   M+  G    V +
Sbjct: 448 EGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVT 507

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y++L+NG CK  +++ A  L   ML+ G+ PD + +N L  G    H      + FD++Q
Sbjct: 508 YNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEG----HCKHGNREDFDKLQ 563

Query: 302 -RNGVAADTWTYRTFIDGLCK 321
              G+  D  +Y + I  L K
Sbjct: 564 SEKGLVQDYGSYTSLIGDLRK 584



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 166/312 (53%)

Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           + A   + E++D G  P+V  FNV+M  LCK  K++EA  L   + + G+RP   ++NTL
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           ++G+C +G ++    L   M        VF+YS+LING CK  +++ A  L+ EM  +G+
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P+ V   TL  G     + +   +++ +M R GV  D  TY T I+GLCK G + EA +
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKK 386

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +     + D   Y  LIDG CK G LE ALE+ + +    +  + V ++ +I G C
Sbjct: 387 LVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFC 446

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            +GQ+ +A     +M E  + P+  T+ M+I GF +  +     +LL +M+    +P   
Sbjct: 447 REGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVV 506

Query: 451 IVSIVVDLLAKN 462
             +++++ L K 
Sbjct: 507 TYNVLLNGLCKQ 518



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 135/257 (52%), Gaps = 14/257 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   G  +  ++L+    PD +T+ +LI GLC    + EA  L  ++   G +PD FTY
Sbjct: 344 GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTY 403

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++G C+      AL + +EM     E       + V +T +I G C+EG V +A+  
Sbjct: 404 TMLIDGCCKEGDLESALEIRKEMVKEGIEL------DNVAFTALISGFCREGQVIEAERT 457

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M +  IKP+  TYT VI GFC   D     +L  EM   G  P VVT+NV+++ LCK
Sbjct: 458 LREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCK 517

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES-MGCKHTVF 240
            G+M  A+ LLD M+  GV PD  TYN LL+G C  G     +E F  ++S  G      
Sbjct: 518 QGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGN----REDFDKLQSEKGLVQDYG 573

Query: 241 SYSILINGY---CKNKE 254
           SY+ LI      CK ++
Sbjct: 574 SYTSLIGDLRKTCKERQ 590



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 1/242 (0%)

Query: 221 NHAKELFVS-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           N A  +F S +E+ G   +   +S+L+N Y  +     A+  +  +    ++        
Sbjct: 136 NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGY 195

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           LF  L +++    A+  ++E+   G   D   +   +  LCK   I EA  LF  +    
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
               + ++N+LI+G CKSG L+    L R +    + P+V TYS++I GLC +GQ+D A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            LFL+M +  +VPN +TF  LI G          +E+  +M    V PD    + +++ L
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 460 AK 461
            K
Sbjct: 376 CK 377


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 223/476 (46%), Gaps = 31/476 (6%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
            F +L+    +  R  +A   F+++  F   P  F Y T++  L  +   ++AL L+  M
Sbjct: 139 AFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                     C PN  TY  ++DGLCK+G    A ++  +M D+ I PNV  YT ++   
Sbjct: 199 VAAG------CAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A   +EA +L   M D+G  P+ VT+N  +  LCK G+++EA + L ++   G     
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             Y+ L+DG     R +     + +M        V  Y+I+I G  +   IE ALS    
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  KG  PD   +NT+   L +   +ERA  L  EM +N +  D+ T    I GLCK G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG---------VL 375
           + EA+++F  +    C+  +  YN+LIDG  + GRLE A  LF  +  G          L
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 376 VPNVVTYS----IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
             N V  S     ++  +C  GQ+ KA  L   + ++ VVP+V+T++ LI G  +     
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 432 KVIELLHKMKEINVMPDASIVSIVVD------------LLAKNEISLNSLPSFTVH 475
             + L  +++   + PD      ++D            +L +N +   S PS +++
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIY 608



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 200/494 (40%), Gaps = 92/494 (18%)

Query: 44  ALFTKL---RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           A+F  L   R  G       +  LV           A+  F  M     EF     P   
Sbjct: 120 AMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRM----DEFQ--SRPTAF 173

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            Y TI+  L   G +  A  L  +M      PN  TY  ++ G C      +A ++F EM
Sbjct: 174 VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEM 233

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +D+G+ PNV  + V++  LC  GK+DEA +LL  M   G  PD  TYN  L G C  GRV
Sbjct: 234 LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV 293

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A +  V ++  G    +  YS LI+G  + +  +     Y  ML + I PDVV++  +
Sbjct: 294 NEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT-------------------------- 314
             G  E  ++E A    D M++ G   DT+ Y T                          
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413

Query: 315 ---------FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
                     I GLCK G + EA+++F  +    C+  +  YN+LIDG  + GRLE A  
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARM 473

Query: 366 LF------------------------------------------------RSLPCGVLVP 377
           LF                                                RS+    +VP
Sbjct: 474 LFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVP 533

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +VVTY+ +I GLC    +D A  LF +++   + P+ IT+  LI G +R +  +  + L 
Sbjct: 534 DVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLF 593

Query: 438 HKMKEINVMPDASI 451
             + +    P  SI
Sbjct: 594 QNILQSGSSPSLSI 607



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 221/443 (49%), Gaps = 19/443 (4%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
              +  R++ +   P+  T+  L+ GLC +    +A  +F ++   G  P+V  YT L++
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLS 250

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            LC       A+ L   M +        C P+ VTY   + GLCK G V++A + L+ ++
Sbjct: 251 SLCNAGKIDEAVQLLGSMKDKG------CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           D      +  Y+ +I G   A+ ++E    +  M+++ + P+VV + +++    + G+++
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A   LD+M + G  PD F YNT+L   C  G +  A  L   M          + +I+I
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ----- 301
            G CK   ++ A+ ++ EM   G  P V+ +N L  G +   ++E A  LF +M+     
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 302 ----RNGVAA----DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
               R  + A    D+ + R  +  +C++G +++A +L  ++       D+  YN+LI+G
Sbjct: 485 SLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCK+  L+ A+ LF+ L    + P+ +TY  +I GL    + + A  LF ++ ++   P+
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 414 VITFDMLIRGFIRINEPSKVIEL 436
           +  ++ ++R   R+ + S+ I L
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINL 627



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 218/480 (45%), Gaps = 36/480 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +LG +      PD VT+ + + GLC   R+ EA      L+  G    +  Y
Sbjct: 256 GKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGY 315

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +          ++ M   N        P+ V YT +I G  + G ++ A   
Sbjct: 316 SCLIDGLFQARRFDEGFGYYKTMLERN------ISPDVVLYTIMIRGCAEAGRIEDALSF 369

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  MK K   P+   Y +V++  C   D   A  L  EM+   +  +  T  +++  LCK
Sbjct: 370 LDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF- 240
            G +DEA ++ D M +HG  P   TYN L+DGF   GR+  A+ LF  ME MG   ++F 
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFL 488

Query: 241 -------------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
                        S   L++  C++ ++  A  L   ++  G+ PDVV +NTL  GL + 
Sbjct: 489 RLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKA 548

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             ++ A +LF E+Q  G++ D  TY T IDGL +     +A+ LF  +        +  Y
Sbjct: 549 RNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIY 608

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN------DGQMDKA-RD 400
           NS++  LC+  +L  A+ L+        +P    + +    L N      DG +D   R+
Sbjct: 609 NSMMRSLCRMKKLSQAINLWLD-----YLPKKYNFPVESEVLANAHKEIEDGSLDDGVRE 663

Query: 401 LF-LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           L  +D E   +  N  T  ++  G  ++      + + H ++E  +    +  +++++ L
Sbjct: 664 LIKIDQEYGYISSNPYTIWLI--GLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 194/427 (45%), Gaps = 32/427 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV+  F  L  +    F      ++ LI GL    R  E    +  +      PDV  
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT ++ G         AL+  + M       G V  P+T  Y T++  LC  G +++A  
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKK----GFV--PDTFCYNTVLKVLCDHGDLERAHT 403

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M   N+  +  T T +I G C     +EA ++F EM + G  P V+T+N ++D   
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAF--------------TYNTLLDGFCLTGRVNHAKEL 226
           + G+++EA R+L   ++ G  P  F              +   L+   C +G+V  A +L
Sbjct: 464 REGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
             S+   G    V +Y+ LING CK + ++GA+ L+ E+  KGI PD + + TL  GL  
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR- 345
            H+   A  LF  + ++G +     Y + +  LC+   + +A+ L+      K  F +  
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVES 642

Query: 346 -----AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
                A+  + DG    G  E+ +++ +    G +  N   Y+I + GLC   + D A  
Sbjct: 643 EVLANAHKEIEDGSLDDGVREL-IKIDQEY--GYISSN--PYTIWLIGLCQVRRTDDALR 697

Query: 401 LFLDMEE 407
           +F  ++E
Sbjct: 698 IFHTLQE 704



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 181/424 (42%), Gaps = 75/424 (17%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   GF     +L+   +PD V +T +I+G     RI +A +    ++  G  PD F Y 
Sbjct: 327 RFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYN 386

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T++  LC       A  L  EM   N         ++ T T +I GLCK G VD+A ++ 
Sbjct: 387 TVLKVLCDHGDLERAHTLRSEMLQNNLVL------DSTTQTIMICGLCKRGLVDEAMQIF 440

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM---------------------- 160
            +M +    P V+TY ++I GF       EA+ LF +M                      
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDS 500

Query: 161 --------------------------MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
                                     +D GV P+VVT+N +++ LCK   +D A RL   
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           +   G+ PD  TY TL+DG     R N A  LF ++   G   ++  Y+ ++   C+ K+
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620

Query: 255 IEGALSLYSEMLSKG----IKPDVVIH-------NTLFVGLFEIHQVERAFKLFDEMQRN 303
           +  A++L+ + L K     ++ +V+ +        +L  G+ E+ ++++ +         
Sbjct: 621 LSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYI------ 674

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
                +  Y  ++ GLC+     +A+ +FHTL+    +        LI+ LC    L  A
Sbjct: 675 ----SSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAA 730

Query: 364 LELF 367
           +++ 
Sbjct: 731 VDIM 734



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 118/261 (45%)

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+   +  +  L+      GR   A + F  M+    + T F Y+ ++     +  I  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+LY+ M++ G  P+   +N L  GL +      A K+FDEM   G+  +   Y   +  
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LC  G I EAV+L  +++   C  D   YN+ + GLCK GR+  A +    L  G     
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +  YS +I GL    + D+    +  M E  + P+V+ + ++IRG          +  L 
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 439 KMKEINVMPDASIVSIVVDLL 459
            MK+   +PD    + V+ +L
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVL 392



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 150/387 (38%), Gaps = 78/387 (20%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +   +L++    D+ T T +I GLC    + EA  +F ++   GC+P V TY
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGE-------FGV--VCE---------------- 96
             L++G  R      A  LF +M  GN          G   VC+                
Sbjct: 456 NALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQ 515

Query: 97  -----------------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
                            P+ VTY T+I+GLCK   +D A  L  +++ K I P+ +TY +
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL------- 192
           +I G   A   N+A  LF  ++  G  P++  +N +M  LC+  K+ +A  L        
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635

Query: 193 ------------------DLMIQHGVRP-----------DAFTYNTLLDGFCLTGRVNHA 223
                             D  +  GVR             +  Y   L G C   R + A
Sbjct: 636 YNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDA 695

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             +F +++  G   T    ++LIN  C ++ +  A+ +    LSK I     + N L   
Sbjct: 696 LRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRW 755

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTW 310
           L   ++ + A  L   M   G   D +
Sbjct: 756 LCICYRRQDAQALAWRMHLVGYDMDVY 782



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 73/161 (45%)

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
           H  E  F    + +  G+ A +  +   +      G   +AV+ F  +   +       Y
Sbjct: 116 HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVY 175

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+++  L  SG + +AL L+  +      PN  TY++++ GLC  G    A  +F +M +
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             ++PNV  + +L+       +  + ++LL  MK+   +PD
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPD 276


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 222/443 (50%), Gaps = 6/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T++ L+        +     L  ++   G +P+V++YT  +  L +      A  +
Sbjct: 193 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRI 252

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M N        C+P+ +T+T +I  LC  G +  AK++  +MK  + KP+ VTY ++
Sbjct: 253 LAKMENEG------CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 306

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  F    D      ++  M   G   NVV +  ++D LC+ G++ EA  + D M Q G+
Sbjct: 307 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 366

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+ ++YN+L+ GF    R   A ELF  M+  G K   +++ + IN Y K+ E   A+ 
Sbjct: 367 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 426

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            Y  M SKGI PDVV  N +  GL +  ++  A ++F E++  GV+ DT TY   I    
Sbjct: 427 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 486

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K     EAV++F+ +    C  D+ A NSLID L K+GR + A  +F  L    L P   
Sbjct: 487 KASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDG 546

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ GL  +G++ +   L  +M  +   PN+IT++ ++    +    +  +++L+ M
Sbjct: 547 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 606

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
                +PD S  + V+  L K E
Sbjct: 607 TTKGCIPDLSSYNTVIYGLVKEE 629



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 224/446 (50%), Gaps = 6/446 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     V   + +     +  TF ++  GL  E  +  A      ++  G   + +TY
Sbjct: 104 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 163

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV  L ++     AL ++  M       GVV  P+  TY+ ++    K   V+    L
Sbjct: 164 NGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVLWL 217

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   +KPNV +YT  IR    AK ++EA R+  +M ++G +P+V+T  V++  LC 
Sbjct: 218 LREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCD 277

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ +A  +   M +   +PD  TY TLLD F   G      E++ +M++ G    V +
Sbjct: 278 AGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVA 337

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+  C+   +  AL ++ EM  KGI P+   +N+L  G  +  +   A +LF  M 
Sbjct: 338 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 397

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   + +T+  FI+   K+G  ++A++ +  ++      D+ A N+++ GL KSGRL 
Sbjct: 398 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 457

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A  +F  L    + P+ +TY++MI       + D+A  +F DM EN  VP+V+  + LI
Sbjct: 458 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 517

Query: 422 RGFIRINEPSKVIELLHKMKEINVMP 447
               +     +   + +++KE+N+ P
Sbjct: 518 DTLYKAGRGDEAWRIFYQLKEMNLEP 543



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 230/448 (51%), Gaps = 12/448 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R    + +L ++      PD +T T LI+ LC   RI +A  +F K++    +PD  TY 
Sbjct: 245 RFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI 304

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TL++       +   + ++  M A+G  +       N V YT +ID LC+ G V +A E+
Sbjct: 305 TLLDKFGDNGDSQSVMEIWNAMKADGYND-------NVVAYTAVIDALCQVGRVFEALEM 357

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK K I P   +Y S+I GF  A  + +A  LF  M   G +PN  T  + ++   K
Sbjct: 358 FDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGK 417

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+  +A +  +LM   G+ PD    N +L G   +GR+  AK +F  +++MG      +
Sbjct: 418 SGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTIT 477

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+++I    K  + + A+ ++ +M+     PDV+  N+L   L++  + + A+++F +++
Sbjct: 478 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 537

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +     TY T + GL + G + E + L   +       ++  YN+++D LCK+G + 
Sbjct: 538 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 597

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL++  S+     +P++ +Y+ +I GL  + + ++A  +F  M++  ++P+  T   ++
Sbjct: 598 DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYATLCTIL 656

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA 449
             F++I     + E LH +K+  + P +
Sbjct: 657 PSFVKI---GLMKEALHIIKDYFLQPGS 681



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 211/442 (47%), Gaps = 8/442 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +   SLI  L    R  EA  +F +L+    EP   TY TL+ GL R       ++L
Sbjct: 508 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 567

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            EEM + N        PN +TY TI+D LCK G V+ A ++L  M  K   P++ +Y +V
Sbjct: 568 LEEMYHSN------YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 621

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHG 199
           I G    + +NEA  +F +M  + + P+  T   I+    K G M EA  ++ D  +Q G
Sbjct: 622 IYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPG 680

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            + D  + ++L++G      +  + E    + S G     F    LI   CK K+   A 
Sbjct: 681 SKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 740

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L  +  S G+     ++N+L  GL + + ++ A  LF EM+  G   D +TY   +D +
Sbjct: 741 ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 800

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            K+  I E +++   +     E     YN++I GL KS RLE A++L+ +L      P  
Sbjct: 801 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 860

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY  ++ GL   G+++ A +LF +M E     N   +++L+ G        KV  L   
Sbjct: 861 CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 920

Query: 440 MKEINVMPDASIVSIVVDLLAK 461
           M +  + PD    +I++D L K
Sbjct: 921 MVDQGINPDIKSYTIIIDTLCK 942



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            I  S  T D      LIK LC + + +EA  L  K + FG       Y +L+ GL   + 
Sbjct: 711  IASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENL 770

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              +A  LF EM     E G  C P+  TY  ++D + K   +++  ++  +M  K  +  
Sbjct: 771  IDIAEGLFAEMK----ELG--CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYEST 824

Query: 134  VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             VTY ++I G   ++   +A  L+  +M QG  P   T+  ++D L K G++++A  L +
Sbjct: 825  YVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFN 884

Query: 194  LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
             M+++G + +   YN LL+G  + G       LF  M   G    + SY+I+I+  CK  
Sbjct: 885  EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 944

Query: 254  EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++   L+ + ++L  G++PD++ +N L  GL +  ++E A  LF+EMQ+ G+  + +TY 
Sbjct: 945  QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1004

Query: 314  TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
            + I  L K G   EA +++  L     + ++  YN+LI G   SG  + A   +  +  G
Sbjct: 1005 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1064

Query: 374  VLVPNVVTY 382
              +PN  TY
Sbjct: 1065 GCLPNSSTY 1073



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 208/439 (47%), Gaps = 32/439 (7%)

Query: 16   KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
            K C  PD  ++ ++I GL  E R  EA ++F +++     PD  T  T++    +     
Sbjct: 609  KGCI-PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMK 666

Query: 76   VALNLFEEMANGNG-------------------------EFGVVCEPNTVTYT-----TI 105
             AL++ ++     G                         EF  +   + +T        +
Sbjct: 667  EALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPL 726

Query: 106  IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
            I  LCK+    +A EL+ + K   +      Y S+I G       + A+ LF EM + G 
Sbjct: 727  IKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC 786

Query: 166  QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
             P+  T+N+++D + K+ +++E  ++ + M + G      TYNT++ G   + R+  A +
Sbjct: 787  GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAID 846

Query: 226  LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            L+ ++ S G   T  +Y  L++G  K   IE A +L++EML  G K +  I+N L  G  
Sbjct: 847  LYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 906

Query: 286  EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                 E+   LF +M   G+  D  +Y   ID LCK G + + +  F  L  +  E D+ 
Sbjct: 907  IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 966

Query: 346  AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
             YN LIDGL KS RLE A+ LF  +    +VPN+ TY+ +I  L   G+  +A  ++ ++
Sbjct: 967  TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026

Query: 406  EENAVVPNVITFDMLIRGF 424
                  PNV T++ LIRG+
Sbjct: 1027 LTKGWKPNVFTYNALIRGY 1045



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 215/455 (47%), Gaps = 22/455 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  +  S + P+ +T+ +++  LC    + +A  +   +   GC PD+ +Y
Sbjct: 559 GKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSY 618

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ GL +      A ++F +M         V  P+  T  TI+    K G +   KE 
Sbjct: 619 NTVIYGLVKEERYNEAFSIFCQMKK-------VLIPDYATLCTILPSFVKIGLM---KEA 668

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE--------MMDQGVQPNVVTFN 173
           L  +KD  ++P     +   R  C++      K+  IE        +   G+  +     
Sbjct: 669 LHIIKDYFLQPG----SKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLC 724

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            ++  LCK  K  EA  L+      GV      YN+L+ G      ++ A+ LF  M+ +
Sbjct: 725 PLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL 784

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GC    F+Y++L++   K+  IE  L +  EM  KG +   V +NT+  GL +  ++E+A
Sbjct: 785 GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 844

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
             L+  +   G +    TY   +DGL K G I +A  LF+ +    C+ +   YN L++G
Sbjct: 845 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 904

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
              +G  E    LF+ +    + P++ +Y+I+I  LC  GQ++     F  + E  + P+
Sbjct: 905 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 964

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +IT+++LI G  +     + + L ++M++  ++P+
Sbjct: 965 LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPN 999



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 214/477 (44%), Gaps = 44/477 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +   + +    P+  ++ SLI G     R  +A  LF  + + G +P+ +T
Sbjct: 348 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYT 407

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +   +N   ++  +I A+  +E M +     G+V  P+ V    ++ GL K G +  AK 
Sbjct: 408 HVLFINYYGKSGESIKAIQRYELMKSK----GIV--PDVVAGNAVLFGLAKSGRLGMAKR 461

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  ++K   + P+ +TYT +I+    A  ++EA ++F +M++    P+V+  N ++D L 
Sbjct: 462 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 521

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+ DEA R+   + +  + P   TYNTLL G    G+V     L   M        + 
Sbjct: 522 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 581

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +++  CKN  +  AL +   M +KG  PD+  +NT+  GL +  +   AF +F +M
Sbjct: 582 TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 641

Query: 301 QR-----------------------------------NGVAADTWTYRTFIDGLCKNGYI 325
           ++                                    G   D  +  + ++G+ K   I
Sbjct: 642 KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI 701

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +++E    +       D      LI  LCK  +   A EL +      +      Y+ +
Sbjct: 702 EKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSL 761

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF---IRINEPSKVIELLHK 439
           I GL ++  +D A  LF +M+E    P+  T+++L+      +RI E  KV E +H+
Sbjct: 762 ICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 818



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 186/399 (46%), Gaps = 6/399 (1%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            D  +  SL++G+  ++ I ++      +   G   D F    L+  LC+    + A  L 
Sbjct: 684  DRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 743

Query: 82   EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            ++  +    FGV  +  T  Y ++I GL  E  +D A+ L  +MK+    P+  TY  ++
Sbjct: 744  KKFKS----FGVSLK--TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 797

Query: 142  RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
                 +    E  ++  EM  +G +   VT+N I+  L K+ ++++A  L   ++  G  
Sbjct: 798  DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 857

Query: 202  PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            P   TY  LLDG    GR+  A+ LF  M   GCK     Y+IL+NG+      E    L
Sbjct: 858  PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHL 917

Query: 262  YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
            + +M+ +GI PD+  +  +   L +  Q+      F ++   G+  D  TY   IDGL K
Sbjct: 918  FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 977

Query: 322  NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            +  + EAV LF+ ++      ++  YNSLI  L K+G+   A +++  L      PNV T
Sbjct: 978  SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1037

Query: 382  YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            Y+ +I G    G  D A   +  M     +PN  T+  L
Sbjct: 1038 YNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 188/406 (46%), Gaps = 11/406 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S    V  ++ KS   PD VT+ +L+              ++  ++  G   +V  Y
Sbjct: 279 GRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAY 338

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +++ LC+      AL +F+EM     + G+V  P   +Y ++I G  K      A EL
Sbjct: 339 TAVIDALCQVGRVFEALEMFDEMK----QKGIV--PEQYSYNSLISGFLKADRFGDALEL 392

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M     KPN  T+   I  +  + +  +A + +  M  +G+ P+VV  N ++  L K
Sbjct: 393 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 452

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++  A R+   +   GV PD  TY  ++       + + A ++F  M    C   V +
Sbjct: 453 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 512

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            + LI+   K    + A  ++ ++    ++P    +NTL  GL    +V+    L +EM 
Sbjct: 513 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 572

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +    +  TY T +D LCKNG + +A+++ +++    C  D+ +YN++I GL K  R  
Sbjct: 573 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYN 632

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA----RDLFL 403
            A  +F  +   VL+P+  T   ++      G M +A    +D FL
Sbjct: 633 EAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 677



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 177/393 (45%), Gaps = 24/393 (6%)

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           R +HT  + N   E+  G+G  G + E   V                        M+ + 
Sbjct: 85  RVAHTTASCNYMLELMRGHGRVGDMAEVFDV------------------------MQRQI 120

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +K NV T+ ++  G         A      M + G+  N  T+N ++  L K+G   EA 
Sbjct: 121 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 180

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            +  +M+  GV P   TY+ L+  F     V     L   ME+ G K  V+SY+I I   
Sbjct: 181 EVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVL 240

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            + K  + A  + ++M ++G KPDV+ H  L   L +  ++  A  +F +M+++    D 
Sbjct: 241 GQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDR 300

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
            TY T +D    NG     +E+++ ++      ++ AY ++ID LC+ GR+  ALE+F  
Sbjct: 301 VTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE 360

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    +VP   +Y+ +I G     +   A +LF  M+ +   PN  T  + I  + +  E
Sbjct: 361 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 420

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             K I+    MK   ++PD    + V+  LAK+
Sbjct: 421 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 453



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 175/371 (47%), Gaps = 10/371 (2%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTS-------VIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            D   E L + +    KP V   T+       ++RG     D  E   +F  M  Q V+ 
Sbjct: 67  ADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAE---VFDVMQRQIVKA 123

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           NV TF  I   L   G +  A   L +M + G+  +A+TYN L+     +G    A E++
Sbjct: 124 NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY 183

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G   +V +YS+L+  + K +++E  L L  EM + G+KP+V  +      L + 
Sbjct: 184 RVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQA 243

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            + + A+++  +M+  G   D  T+   I  LC  G I +A ++F  ++    + D   Y
Sbjct: 244 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 303

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +L+D    +G  +  +E++ ++       NVV Y+ +I  LC  G++ +A ++F +M++
Sbjct: 304 ITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 363

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
             +VP   +++ LI GF++ +     +EL   M      P+     + ++   K+  S+ 
Sbjct: 364 KGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIK 423

Query: 468 SLPSFTVHEQQ 478
           ++  + + + +
Sbjct: 424 AIQRYELMKSK 434



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 6/245 (2%)

Query: 3    RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            R+     +   ++   F+P   T+  L+ GL    RI +A  LF ++  +GC+ +   Y 
Sbjct: 840  RLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 899

Query: 63   TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
             L+NG     +T    +LF++M +          P+  +YT IID LCK G ++      
Sbjct: 900  ILLNGHRIAGNTEKVCHLFQDMVDQG------INPDIKSYTIIIDTLCKAGQLNDGLTYF 953

Query: 123  LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             Q+ +  ++P+++TY  +I G   +K   EA  LF EM  +G+ PN+ T+N ++  L K 
Sbjct: 954  RQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1013

Query: 183  GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            GK  EA ++ + ++  G +P+ FTYN L+ G+ ++G  + A   +  M   GC     +Y
Sbjct: 1014 GKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073

Query: 243  SILIN 247
              L N
Sbjct: 1074 MQLPN 1078



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 6/159 (3%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD  ++T +I  LC   ++ +    F +L   G EPD+ TY  L++GL ++     A++L
Sbjct: 928  PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 987

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            F EM       G+V  PN  TY ++I  L K G   +A ++  ++  K  KPNV TY ++
Sbjct: 988  FNEMQKK----GIV--PNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNAL 1041

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
            IRG+  +   + A   +  M+  G  PN  T+  + ++L
Sbjct: 1042 IRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/320 (20%), Positives = 133/320 (41%), Gaps = 35/320 (10%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V     + N +++ +  +G++ + + + D+M +  V+ +  T+  +  G  + G +  A 
Sbjct: 86  VAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAP 145

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
                M+  G     ++Y+ L+    K+     AL +Y  M+  G+ P V  ++ L V  
Sbjct: 146 VALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAF 205

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +   VE    L  EM+ +GV  + ++Y   I  L +     EA  +   +    C+   
Sbjct: 206 GKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK--- 262

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
                                           P+V+T++++I  LC+ G++  A+D+F  
Sbjct: 263 --------------------------------PDVITHTVLIQVLCDAGRISDAKDVFWK 290

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M+++   P+ +T+  L+  F    +   V+E+ + MK      +    + V+D L +   
Sbjct: 291 MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 350

Query: 465 SLNSLPSFTVHEQQEEVDES 484
              +L  F   +Q+  V E 
Sbjct: 351 VFEALEMFDEMKQKGIVPEQ 370



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G+++ G     ++L+    PD +T+  LI GL    R+ EA +LF +++  G  P+++TY
Sbjct: 944  GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1003

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +L+  L +      A  ++EE+           +PN  TY  +I G    G  D A   
Sbjct: 1004 NSLILHLGKAGKAAEAGKMYEELLTKG------WKPNVFTYNALIRGYSVSGSTDSAYAA 1057

Query: 122  LLQMKDKNIKPNVVTY 137
              +M      PN  TY
Sbjct: 1058 YGRMIVGGCLPNSSTY 1073


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 194/367 (52%), Gaps = 1/367 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEA 153
           C P+ V Y T+I G CK G  D+A ++  ++K + + KPN V++ +++   C      +A
Sbjct: 7   CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             +F EM+  G+Q +V   N ++   C+ G + +A RLL  M  H    D FTY+ L+D 
Sbjct: 67  LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
               GR   A E+F +M+  GC      Y++LI+   K  +++ AL L  +M  KGI PD
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
              +N +   L    + E+A+  F  M+R   + D  TY T ++GL K     EA +LF 
Sbjct: 187 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFD 246

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            ++  KC  D+  + +LID L K+GR+E ALE    L     VPN   Y+ +I G C  G
Sbjct: 247 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSG 306

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           Q+DK  +LF DM E +  P+ IT+ +L+ GF R    S  +ELL +M      P  +  +
Sbjct: 307 QVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYN 366

Query: 454 IVVDLLA 460
           +++  L+
Sbjct: 367 VLIRSLS 373



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 190/402 (47%), Gaps = 7/402 (1%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPDVFTYTTLVNGLCRTSHTIVAL 78
            PD V + +LI G C       A  +F +L+  G C+P+  ++ TLV  LC+ S    AL
Sbjct: 8   APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 67

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            +F+EM       G   + +     T+I   C+ G + +A+ LL  M       +V TY+
Sbjct: 68  AVFQEM------LGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYS 121

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            ++     A    +A  +F  M   G  P+ V +NV++  L K GK+DEA  LL+ M + 
Sbjct: 122 YLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 181

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ PD  TYN ++D     GR   A   F  M+       V +Y+ L+NG  K +  + A
Sbjct: 182 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 241

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L+ EM +    PD+    TL   L +  ++E A +    + + G   +++ Y   I G
Sbjct: 242 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISG 301

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C++G + +  ELF  +    C  D   Y  L+ G  + G   +A+EL + +      P 
Sbjct: 302 FCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA 361

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + TY+++I  L   GQ++ A  LF +M      P++ T+  L
Sbjct: 362 LATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 150/312 (48%), Gaps = 6/312 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +     +L  +    F  D  T++ L+  L    R  +A  +F+ ++  GC PD   
Sbjct: 95  LGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVV 154

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L++ L +      AL L E+M N  G       P+  TY  +ID L   G  +KA  
Sbjct: 155 YNVLISCLGKQGKVDEALELLEDM-NRKGIM-----PDCRTYNIVIDVLSSCGRYEKAYS 208

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               MK +   P+VVTY +++ G    +  +EA  LF EM      P++ TF  ++D L 
Sbjct: 209 FFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLA 268

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+M++A      +++ G  P+++ YN L+ GFC +G+V+   ELF  M    C     
Sbjct: 269 KAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSI 328

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+IL+ G+ +      A+ L  EM+ +G  P +  +N L   L    QVE A+ LF EM
Sbjct: 329 TYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEM 388

Query: 301 QRNGVAADTWTY 312
              G   D  TY
Sbjct: 389 IAKGFNPDMQTY 400



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 134/261 (51%), Gaps = 1/261 (0%)

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTVFSYSILINGYCKNKEIEGALS 260
           PD   YNTL+ G+C  G  + A ++F  ++  G CK    S+  L+   CK      AL+
Sbjct: 9   PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++ EML  G++ DV + NTL      +  + +A +L   M  +    D +TY   +D L 
Sbjct: 69  VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G   +A+E+F  ++   C  D   YN LI  L K G+++ ALEL   +    ++P+  
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I+I  L + G+ +KA   F  M+     P+V+T++ L+ G  ++    +  +L  +M
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 248

Query: 441 KEINVMPDASIVSIVVDLLAK 461
           +    MPD +    ++D LAK
Sbjct: 249 QANKCMPDLTTFGTLIDTLAK 269



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 6/254 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L  + +    PD  T+  +I  L +  R  +A + F  ++     PDV TY
Sbjct: 166 GKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTY 225

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NGL +   T  A +LF+EM          C P+  T+ T+ID L K G ++ A E 
Sbjct: 226 NTLLNGLKKLRRTDEACDLFDEMQANK------CMPDLTTFGTLIDTLAKAGRMEDALEQ 279

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++      PN   Y ++I GFC +   ++   LF +M++    P+ +T+ +++    +
Sbjct: 280 SARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSR 339

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A  LL  M++ G  P   TYN L+    + G+V  A  LF  M + G    + +
Sbjct: 340 RGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQT 399

Query: 242 YSILINGYCKNKEI 255
           YS L N    NK +
Sbjct: 400 YSALPNLSTPNKSV 413



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 36/159 (22%)

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC-GVLVPNVVTYSIMI------------ 386
           C  D+ AYN+LI G CK+G  + AL++FR L   G   PN V++  ++            
Sbjct: 7   CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66

Query: 387 ---------GGL--------------CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
                     GL              C  G + +AR L   M  +A V +V T+  L+  
Sbjct: 67  LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             +    +K +E+   M++   MPD  + ++++  L K 
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQ 165


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 224/454 (49%), Gaps = 17/454 (3%)

Query: 6   HGFVVLGRI---------LKSCFTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HG   +G I         L+S   P +   + +LI+G C + R  EA  L  +++  G  
Sbjct: 233 HGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGIS 292

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           PD+++Y+ LVN  C        +NL +EM + N +  +VC       T+++ GL  +G V
Sbjct: 293 PDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVC------CTSVLMGLRTKGLV 346

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           +       ++  K  K ++++Y+++I GF    +   A  L  EM   G+ P+ + +  +
Sbjct: 347 NDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISL 406

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           + E C+ G + EA +    M+Q G++PD  T N ++D +C  G+   A      M+    
Sbjct: 407 IREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNI 466

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF-EIHQVERAF 294
               ++YS++IN  CK + +E A  +   M    I P V+ + T+  G   +     +A+
Sbjct: 467 LPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAW 526

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           KL+ +M + G   D  T    +D   K G + +A+ LF  +       D  A+ ++IDG 
Sbjct: 527 KLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGY 586

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C+ G ++ A  +++ +    + PNV TY+ ++ G C   ++D A  L  DM+ N+V P+V
Sbjct: 587 CRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDV 646

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            T+  LI G+ RI    +  E+  +MK+   +PD
Sbjct: 647 KTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPD 680



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 221/455 (48%), Gaps = 22/455 (4%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           C    A   + LIK   +   + +A  +F + +  G E ++ +   L+  L         
Sbjct: 110 CVGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAV 169

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF-----VDKAKELLLQMKDKNIKP 132
            +LF+++ N          PN  TYT +I+  CKE       +++A  +L +M++K   P
Sbjct: 170 RSLFDDLKNSGPS------PNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENP 223

Query: 133 NVVTYTSVIRGFCYAKD----WNEAKRLFIEMMDQGVQP-NVVTFNVIMDELCKNGKMDE 187
            VVTY   I G C        WN+     I+ +    QP N+  +N ++   C+ G+ DE
Sbjct: 224 TVVTYGVYIHGLCRVGSIEDAWNK-----IQDLRSSNQPLNIYCYNALIQGFCQKGRPDE 278

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A +LL+ M   G+ PD ++Y+ L++ FC  G +     L   ME    K  +   + ++ 
Sbjct: 279 ALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLM 338

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G      +   L+ + E+ +KG K D++ ++TL  G  + H V+ A  L  EM++NG+  
Sbjct: 339 GLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVP 398

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D   Y + I   C+ G + EA++ F+T+     + DI   N ++D  C  G+ E AL   
Sbjct: 399 DYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYI 458

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR- 426
             +    ++PN  TYS++I  LC    ++KA ++   M ++ + P+VI +  ++ G+ + 
Sbjct: 459 NQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQ 518

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              P K  +L  KM ++   PD   ++++VD+ +K
Sbjct: 519 FKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSK 553



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 209/473 (44%), Gaps = 45/473 (9%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH----TIVALNLFEEM 84
           L+K L    ++    +LF  L+  G  P+V+TYT ++N  C+  H     +   +L  E 
Sbjct: 156 LLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEE 215

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
               GE      P  VTY   I GLC+ G ++ A   +  ++  N   N+  Y ++I+GF
Sbjct: 216 MEEKGE-----NPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGF 270

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C     +EA +L  EM D+G+ P++ +++++++  C  G ++    L+  M     +P  
Sbjct: 271 CQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPL 330

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
               ++L G    G VN     F  + + G KH + SYS LI+G+ K   ++ A +L  E
Sbjct: 331 VCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHE 390

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M   G+ PD +I+ +L         ++ A K F  M ++G+  D  T    +D  C  G 
Sbjct: 391 MRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQ 450

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE------------------- 365
             EA+   + ++      +   Y+ +I+ LCK   +E A E                   
Sbjct: 451 FEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTT 510

Query: 366 -----------------LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
                            L+R +P     P+ VT ++++      G+M KA +LF +M E 
Sbjct: 511 IMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEE 570

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            +  +   F  +I G+ R+    +   +  KMK  NV P+    + +VD   K
Sbjct: 571 GLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCK 623



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 156/303 (51%), Gaps = 11/303 (3%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K+   PD + + SLI+  C +  + EA   F  +   G +PD+ T   +V+  C      
Sbjct: 393 KNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFE 452

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            AL    +M + N        PN+ TY+ II+ LCK   V+KA E+L  M   NI P+V+
Sbjct: 453 EALIYINQMKDQN------ILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVI 506

Query: 136 TYTSVIRGFCYAKDWN---EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            YT+++ G  YAK +    +A +L+ +M   G +P+ VT  V++D   K GKM +A  L 
Sbjct: 507 HYTTIMDG--YAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLF 564

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
             M + G+  D F +  ++DG+C  G V  A  ++  M+       V +Y+ L++G+CK 
Sbjct: 565 KEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKL 624

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
           K ++ A  L  +M    + PDV  +  L  G   I  ++RA+++FDEM++ G   D   Y
Sbjct: 625 KRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAY 684

Query: 313 RTF 315
            T 
Sbjct: 685 LTL 687



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V   + +  ++ ++  TP+  T+T L+ G C   R+  A  L   ++     PDV T
Sbjct: 589 VGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKT 648

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
           YT L+ G  R  +   A  +F+EM       G +  P+ + Y T+
Sbjct: 649 YTALIAGYQRIENIDRAYEVFDEMKKK----GTL--PDHIAYLTL 687


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 237/461 (51%), Gaps = 8/461 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +P+  T+  LIK  C + +  +A  L   +   G  PDVF+Y TL+N L +  +   AL
Sbjct: 120 LSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDAL 179

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTY 137
            LF+EM     E GV   P+   Y  +IDG  K+G +  A E+  ++ K  ++ PN+ +Y
Sbjct: 180 KLFDEMP----ERGVT--PDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSY 233

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
             +I G C    ++E+  ++  M       ++ T++ ++  LC +G +D A+R+   M +
Sbjct: 234 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 293

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +GV PD   YNT+L+G+   GR+    EL+  ME  GC+ TV SY+ILI G  +N +++ 
Sbjct: 294 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDE 352

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A+S++  +  K    D + +  L  GL +   + +A  + +E +      DT+ Y + I+
Sbjct: 353 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 412

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GLC+ G + E   +   +    C+ +    N++I+G  ++ +LE AL  F ++      P
Sbjct: 413 GLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 472

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
            VVTY+ +I GL    +  +A  L  +M +    PN+IT+ +L+ G  +  +    + L 
Sbjct: 473 TVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLW 532

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
            +  E    PD  + +I++  L  +    ++L  ++  +Q+
Sbjct: 533 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 573



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 225/464 (48%), Gaps = 20/464 (4%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYTT 63
           SH   V   ILK  F P  V            S   +A  +F ++  +FGC+P + +Y +
Sbjct: 40  SHTPYVFHHILKRLFDPKLVA-----HAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNS 94

Query: 64  LVNGLCRTSHTIVALNLF---EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           L+N L  ++    A + F   E M            PN  TY  +I   C++   DKAKE
Sbjct: 95  LLNALIESNKWDEAESFFLYFETMG---------LSPNLQTYNILIKISCRKKQFDKAKE 145

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL  M  +   P+V +Y ++I         ++A +LF EM ++GV P+V  +N+++D   
Sbjct: 146 LLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFF 205

Query: 181 KNGKMDEASRLLDLMIQ-HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           K G +  AS + + +++   V P+  +YN +++G C  G+ + + E++  M+       +
Sbjct: 206 KKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDL 265

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           ++YS LI+G C +  ++GA  +Y EM   G+ PDVV++NT+  G     ++E   +L+  
Sbjct: 266 YTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKV 325

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M++ G      +Y   I GL +N  + EA+ ++  L    C  D   Y  L+ GLCK+G 
Sbjct: 326 MEKEGCRTVV-SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGY 384

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  AL +      G    +   YS MI GLC +G++D+   +   M ++   PN    + 
Sbjct: 385 LNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNA 444

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           +I GF+R ++    +     M      P     + +++ L+K E
Sbjct: 445 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 488



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 218/444 (49%), Gaps = 8/444 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   ++ SL+  L   ++  EA + F      G  P++ TY  L+   CR      A  L
Sbjct: 87  PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKEL 146

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
              M      +G    P+  +Y T+I+ L K G++  A +L  +M ++ + P+V  Y  +
Sbjct: 147 LNWM------WGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 200

Query: 141 IRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I GF    D   A  ++  ++    V PN+ ++NV+++ LCK GK DE+  +   M ++ 
Sbjct: 201 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 260

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
              D +TY+TL+ G C +G ++ A  ++  M   G    V  Y+ ++NGY +   IE  L
Sbjct: 261 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 320

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L+  M  +G +  VV +N L  GLFE  +V+ A  +++ +      AD+ TY   + GL
Sbjct: 321 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 379

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           CKNGY+ +A+ +       + + D  AY+S+I+GLC+ GRL+    +   +      PN 
Sbjct: 380 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 439

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
              + +I G     +++ A   F +M      P V+T++ LI G  +    S+   L+ +
Sbjct: 440 YVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 499

Query: 440 MKEINVMPDASIVSIVVDLLAKNE 463
           M +    P+    S++++ L + +
Sbjct: 500 MLQKGWKPNMITYSLLMNGLCQGK 523



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 219/426 (51%), Gaps = 7/426 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+    F +  R+ K+    D  T+++LI GLC    +  A  ++ ++   G  PDV  Y
Sbjct: 244 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 303

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++NG  R       L L++ M          C    V+Y  +I GL +   VD+A  +
Sbjct: 304 NTMLNGYLRAGRIEECLELWKVMEKEG------CR-TVVSYNILIRGLFENAKVDEAISI 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              + +K+   + +TY  ++ G C     N+A  +  E  +     +   ++ +++ LC+
Sbjct: 357 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 416

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++DE + +LD M +HG +P+ +  N +++GF    ++  A   F +M S GC  TV +
Sbjct: 417 EGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 476

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LING  K +    A +L  EML KG KP+++ ++ L  GL +  +++ A  L+ +  
Sbjct: 477 YNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 536

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   D   +   I GLC +G + +A++L+  ++   C  ++  +N+L++G  K    E
Sbjct: 537 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFE 596

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A +++  +    L P++++Y+I + GLC+  ++  A     D  +  V+P  IT+++L+
Sbjct: 597 RASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656

Query: 422 RGFIRI 427
           +G++ +
Sbjct: 657 QGYLAL 662



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 241/457 (52%), Gaps = 8/457 (1%)

Query: 2   GRVSHGFVVLGRILKS-CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G + +   +  R+LK     P+  ++  +I GLC   +  E+  ++ +++      D++T
Sbjct: 208 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 267

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TL++GLC + +   A  +++EMA    E GV   P+ V Y T+++G  + G +++  E
Sbjct: 268 YSTLIHGLCGSGNLDGATRVYKEMA----ENGV--SPDVVVYNTMLNGYLRAGRIEECLE 321

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M+ +  +  VV+Y  +IRG       +EA  ++  + ++    + +T+ V++  LC
Sbjct: 322 LWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 380

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           KNG +++A  +L+         D F Y+++++G C  GR++    +   M   GCK   +
Sbjct: 381 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPY 440

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
             + +ING+ +  ++E AL  +  M+SKG  P VV +NTL  GL +  +   A+ L  EM
Sbjct: 441 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 500

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + G   +  TY   ++GLC+   +  A+ L+        + D++ +N +I GLC SG++
Sbjct: 501 LQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 560

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E AL+L+  +     VPN+VT++ ++ G       ++A  ++  + +  + P++I++++ 
Sbjct: 561 EDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNIT 620

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           ++G    +  S  +  L+   +  V+P A   +I+V 
Sbjct: 621 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQ 657



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 1/149 (0%)

Query: 321 KNGYIVEAVELFHTLR-ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           KN    +A+++F  +  I  C+  IR+YNSL++ L +S + + A   F       L PN+
Sbjct: 65  KNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNL 124

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            TY+I+I   C   Q DKA++L   M      P+V ++  LI    +    S  ++L  +
Sbjct: 125 QTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 184

Query: 440 MKEINVMPDASIVSIVVDLLAKNEISLNS 468
           M E  V PD +  +I++D   K    LN+
Sbjct: 185 MPERGVTPDVACYNILIDGFFKKGDILNA 213



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 33/181 (18%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R S  + ++  +L+  + P+ +T++ L+ GLC   ++  A  L+ +    G +PDV  + 
Sbjct: 489 RFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 548

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNG-------------------------------EF 91
            +++GLC +     AL L+ EM   N                                ++
Sbjct: 549 IIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQY 608

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
           G+  +P+ ++Y   + GLC    +  A   L    D+ + P  +T+  +++G+   K + 
Sbjct: 609 GL--QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYM 666

Query: 152 E 152
           E
Sbjct: 667 E 667



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 12/146 (8%)

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVLVPNVVTYSIMI 386
           +FH   ILK  FD +    +     K+   + AL++F+ +     C    P + +Y+ ++
Sbjct: 45  VFH--HILKRLFDPKL---VAHAYAKNSMPDQALDIFQRMHEIFGCQ---PGIRSYNSLL 96

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             L    + D+A   FL  E   + PN+ T+++LI+   R  +  K  ELL+ M      
Sbjct: 97  NALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFS 156

Query: 447 PDASIVSIVVDLLAKNEISLNSLPSF 472
           PD      +++ LAKN    ++L  F
Sbjct: 157 PDVFSYGTLINSLAKNGYMSDALKLF 182


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 224/464 (48%), Gaps = 29/464 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++  G  ++      C  P  V +  +I G C +  +  A     +L++ G  P V T
Sbjct: 218 LGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVET 277

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVV----------- 94
           Y  L+NG C+         L  EMA               +   ++G+V           
Sbjct: 278 YGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMA 337

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
              C P+  TY  +I+  CK G +++A ELL + K++ + PN  +YT ++  +C   D+ 
Sbjct: 338 EMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYV 397

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A  +   + + G + ++V++   +  +   G++D A  + + M++ GV PDA  YN L+
Sbjct: 398 KASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILM 457

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C  GR+   K L   M     +  V+ ++ LI+G+ +N E++ A+ ++  ++ KG+ 
Sbjct: 458 SGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVD 517

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P +V +N +  G  +  ++  A    +EM     A D +TY T IDG  K   +  A+++
Sbjct: 518 PGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKM 577

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +   K + ++  Y SLI+G CK   +  A ++F  +    LVPNVVTY+ ++GG   
Sbjct: 578 FGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFK 637

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            G+ ++A  +F  M  N  +PN  TF  LI G         +IE
Sbjct: 638 AGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIE 681



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 233/456 (51%), Gaps = 29/456 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L +  +    P+  ++T L+   C +   ++A+ +  ++   G + D+ +Y
Sbjct: 359 GRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSY 418

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              ++G+       VAL + E+M     E GV   P+   Y  ++ GLCK+G +   K L
Sbjct: 419 GAFIHGVVVAGEIDVALMVREKMM----EKGVF--PDAQIYNILMSGLCKKGRIPAMKLL 472

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D+N++P+V  + ++I GF    + +EA ++F  ++ +GV P +V +N ++   CK
Sbjct: 473 LSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCK 532

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GKM +A   L+ M      PD +TY+T++DG+     ++ A ++F  M     K  V +
Sbjct: 533 FGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVIT 592

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LING+CK  ++  A  ++S M S  + P+VV + TL  G F+  + ERA  +F+ M 
Sbjct: 593 YTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELML 652

Query: 302 RNGVAADTWTYRTFIDGLCKNG---YIVEAVELFHTLRILKCEF-----------DIRAY 347
            NG   +  T+   I+GL        ++E  +     R L  +F            I AY
Sbjct: 653 MNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAY 712

Query: 348 NSLIDGLCKSGRLEIA-LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL--- 403
           NS+I  LCK G ++ A L L + L  G L+ + V ++ ++ GLC+ G+  + R++     
Sbjct: 713 NSVIVCLCKHGTVDTAQLLLTKMLTKGFLI-DSVCFTALLHGLCHKGKSKEWRNIISCDL 771

Query: 404 -DMEENAVVPNVITFD-MLIRGFIRINEPSKVIELL 437
             +E    V   +T D  L +G  R++E S +++ L
Sbjct: 772 NKIELQTAVKYSLTLDKYLYQG--RLSEASVILQTL 805



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 213/498 (42%), Gaps = 69/498 (13%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNG 67
           +VL  +      P    F++LI        +  A  LF  +R +  C P       L+NG
Sbjct: 116 LVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNG 175

Query: 68  LCRTSHTIVALNLFEEMA---NGNG------------------------------EFGVV 94
           L ++    VAL L+++M    +G G                               +G  
Sbjct: 176 LVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKC 235

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C P+ V Y  IIDG CK+G +  A   L ++K K + P V TY ++I GFC A ++    
Sbjct: 236 CVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVD 295

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +L  EM  +G+  NV  FN ++D   K G + EA+ +L  M + G  PD  TYN +++  
Sbjct: 296 QLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFS 355

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  GR+  A EL    +  G     FSY+ L++ YCK  +   A  +   +   G K D+
Sbjct: 356 CKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDL 415

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V +     G+    +++ A  + ++M   GV  D                          
Sbjct: 416 VSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDA------------------------- 450

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
                     + YN L+ GLCK GR+     L   +    + P+V  ++ +I G   +G+
Sbjct: 451 ----------QIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGE 500

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D+A  +F  +    V P ++ ++ +I+GF +  + +  +  L++M  ++  PD    S 
Sbjct: 501 LDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYST 560

Query: 455 VVDLLAKNEISLNSLPSF 472
           V+D   K     ++L  F
Sbjct: 561 VIDGYVKQHDMSSALKMF 578



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 176/373 (47%), Gaps = 5/373 (1%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C  + V +++++  L       + + +L  MK +++KP    ++++I  +  +   + A 
Sbjct: 91  CSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRAL 150

Query: 155 RLFIEMMD-QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH----GVRPDAFTYNT 209
           +LF  + +     P  V  N++++ L K+GK+D A +L D M+Q     G   D +T + 
Sbjct: 151 QLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSI 210

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           ++ G C  G++   + L        C   V  Y+++I+GYCK  +++ A    +E+  KG
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           + P V  +  L  G  +  + E   +L  EM   G+  +   +   ID   K G + EA 
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAA 330

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           E+   +  + C  DI  YN +I+  CK GR+E A EL        L+PN  +Y+ ++   
Sbjct: 331 EMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAY 390

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           C  G   KA  +   + E     +++++   I G +   E    + +  KM E  V PDA
Sbjct: 391 CKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDA 450

Query: 450 SIVSIVVDLLAKN 462
            I +I++  L K 
Sbjct: 451 QIYNILMSGLCKK 463


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 159/528 (30%), Positives = 240/528 (45%), Gaps = 75/528 (14%)

Query: 7   GFV--VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           GFV  +   +L +   P   TF  LI  LC       A  LF K+   GC P+ FT   L
Sbjct: 132 GFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGIL 191

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V GLCR      AL    E+ N N    +    N V Y T++   C+E   ++A+ L+ +
Sbjct: 192 VRGLCRAGLVKQAL----ELVNNNNSCRIA---NRVVYNTLVSRFCREEMNNEAERLVER 244

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM-MDQGV---QPNVVTFNVIMDELC 180
           M +  + P+VVT+ S I   C A    EA R+F +M MD  +   +PNVVTFN+++   C
Sbjct: 245 MNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFC 304

Query: 181 K-----------------------------------NGKMDEASRLLDLMIQHGVRPDAF 205
           K                                   NG++ EA  +LD M+  G+ P+A+
Sbjct: 305 KHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAY 364

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN ++DG C    ++ A+ L   M   G      +YS L++GYC   ++  A S+  EM
Sbjct: 365 TYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEM 424

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           +  G +P+    NTL   L++  +   A ++  +M       DT T    ++GLC+NG +
Sbjct: 425 IRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGEL 484

Query: 326 VEAVEL-----------------FHTL-----RILKCEFDIRAYNSLIDGLCKSGRLEIA 363
            +A E+                 F +L      +  C  D   Y +LI+GLCK GRLE A
Sbjct: 485 DKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEA 544

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            + F  +    L P+ VTY   I   C  G++  A  +  DME N     + T++ LI G
Sbjct: 545 KKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILG 604

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL-----AKNEISL 466
               N+  ++  L  +MKE  + PD    + ++  L     AK+ ISL
Sbjct: 605 LGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISL 652



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 226/468 (48%), Gaps = 24/468 (5%)

Query: 17  SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           SC   + V + +L+   C E    EA  L  ++   G  PDV T+ + ++ LCR    + 
Sbjct: 213 SCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVME 272

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A  +F +M   + E G+   PN VT+  ++ G CK G +  A+ L+  MK      ++  
Sbjct: 273 ASRIFRDM-QMDAELGLP-RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLEC 330

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y   + G     +  EA+ +  EM+ +G++PN  T+N++MD LC+N  + +A  L+DLM+
Sbjct: 331 YNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMM 390

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           ++GV PD   Y+TLL G+C  G+V  AK +   M   GC+   ++ + L++   K     
Sbjct: 391 RNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTL 450

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA--------- 307
            A  +  +M  K  +PD V  N +  GL    ++++A ++  EM  NG  +         
Sbjct: 451 EAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFAS 510

Query: 308 -------------DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
                        D  TY T I+GLCK G + EA + F  +       D   Y++ I   
Sbjct: 511 LINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSF 570

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK G++  A  + + +        + TY+ +I GL ++ Q+ +   L  +M+E  + P++
Sbjct: 571 CKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDI 630

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
            T++ +I       +    I LLH+M +  + P+ S   I++   +K+
Sbjct: 631 CTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKS 678



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 223/461 (48%), Gaps = 41/461 (8%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
            +P    +  L++      R    + L++ +      P  +T+  L++ LC +     AL
Sbjct: 111 LSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHAL 170

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LFE+M          C PN  T   ++ GLC+ G V +A EL+       I  N V Y 
Sbjct: 171 QLFEKMPQKG------CCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRI-ANRVVYN 223

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQ 197
           +++  FC  +  NEA+RL   M + GV P+VVTFN  +  LC+ GK+ EASR+  D+ + 
Sbjct: 224 TLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMD 283

Query: 198 HGV---RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
             +   RP+  T+N +L GFC  G +  A+ L  +M+ +G   ++  Y+I + G  +N E
Sbjct: 284 AELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGE 343

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  A  +  EM++KGI+P+   +N +  GL   H +  A  L D M RNGV  DT  Y T
Sbjct: 344 LLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYST 403

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            + G C  G + EA  + H +    C+ +    N+L+  L K GR   A E+ + +    
Sbjct: 404 LLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKC 463

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA----------------------VVP 412
             P+ VT +I++ GLC +G++DKA ++  +M  N                        +P
Sbjct: 464 YQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLP 523

Query: 413 NVITFDMLIRGFIRINE----PSKVIELLHKMKEINVMPDA 449
           + IT+  LI G  ++        K IE+L K    N+ PD+
Sbjct: 524 DGITYTTLINGLCKVGRLEEAKKKFIEMLAK----NLRPDS 560



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 193/437 (44%), Gaps = 55/437 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFG----CEPDVFTYTTLVNGLCRTSHTIV 76
           PD VTF S I  LC   ++MEA+ +F  +++        P+V T+  ++ G C+      
Sbjct: 252 PDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGD 311

Query: 77  ALNLFEEMAN------------------GNGEF-----------GVVCEPNTVTYTTIID 107
           A  L E M                     NGE                EPN  TY  ++D
Sbjct: 312 ARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMD 371

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
           GLC+   +  A+ L+  M    + P+ V Y++++ G+C      EAK +  EM+  G QP
Sbjct: 372 GLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQP 431

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           N  T N ++  L K G+  EA  +L  M +   +PD  T N +++G C  G ++ A E+ 
Sbjct: 432 NTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIV 491

Query: 228 VSMESMG----------------------CKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
             M + G                      C     +Y+ LING CK   +E A   + EM
Sbjct: 492 SEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEM 551

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           L+K ++PD V ++T      +  ++  AF++  +M+RNG +    TY   I GL  N  I
Sbjct: 552 LAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQI 611

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            E   L   ++      DI  YN++I  LC+ G+ + A+ L   +    + PNV ++ I+
Sbjct: 612 FEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKIL 671

Query: 386 IGGLCNDGQMDKARDLF 402
           I           A +LF
Sbjct: 672 IKAFSKSSDFKVACELF 688



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 215/468 (45%), Gaps = 33/468 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    +VL  ++     P+A T+  ++ GLC    + +A  L   +   G  PD   Y
Sbjct: 342 GELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAY 401

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +TL++G C       A ++  EM   NG     C+PNT T  T++  L KEG   +A+E+
Sbjct: 402 STLLHGYCSRGKVFEAKSVLHEMIR-NG-----CQPNTYTCNTLLHSLWKEGRTLEAEEM 455

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ--------------- 166
           L +M +K  +P+ VT   V+ G C   + ++A  +  EM   G                 
Sbjct: 456 LQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSI 515

Query: 167 -------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
                  P+ +T+  +++ LCK G+++EA +    M+   +RPD+ TY+T +  FC  G+
Sbjct: 516 HNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGK 575

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           ++ A  +   ME  GC  T+ +Y+ LI G   N +I     L  EM  KGI PD+  +N 
Sbjct: 576 ISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNN 635

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH-TLRIL 338
           +   L E  + + A  L  EM   G++ +  +++  I    K+     A ELF   L I 
Sbjct: 636 IITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNI- 694

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFR-SLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
            C      Y+ + + L   G+L  A ELF  SL   + + N + Y  +I  LC D ++  
Sbjct: 695 -CGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFM-YKDLIARLCQDERLAD 752

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           A  L   + +     +  +F  +I G  +     +  EL  +M E+ +
Sbjct: 753 ANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELEL 800



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 193/417 (46%), Gaps = 23/417 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     VL  ++++   P+  T  +L+  L  E R +EA  +  K+     +PD  T 
Sbjct: 412 GKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTC 471

Query: 62  TTLVNGLCRTSHTIVALNLFEEMA--------NGNGEFGVV--------CEPNTVTYTTI 105
             +VNGLCR      A  +  EM          GN    ++        C P+ +TYTT+
Sbjct: 472 NIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTL 531

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           I+GLCK G +++AK+  ++M  KN++P+ VTY + I  FC     + A R+  +M   G 
Sbjct: 532 INGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGC 591

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
              + T+N ++  L  N ++ E   L D M + G+ PD  TYN ++   C  G+   A  
Sbjct: 592 SKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAIS 651

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           L   M   G    V S+ ILI  + K+ + + A  L+   L+   + +  +++ +F  L 
Sbjct: 652 LLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKE-ALYSLMFNELL 710

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              Q+  A +LF+      +    + Y+  I  LC++  + +A  L + L      FD  
Sbjct: 711 AGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHA 770

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV--TYS----IMIGGLCNDGQMD 396
           ++  +IDGL K G    A EL + +    L    V  TYS    ++ G L  DG  D
Sbjct: 771 SFMPVIDGLSKRGNKRQADELAKRMMELELEDRPVDRTYSNRKRVIPGKLLKDGGSD 827



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 172/383 (44%), Gaps = 14/383 (3%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKA----KELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
           +  P+ ++   ++  L   G VD A    K L  Q    ++ P++  Y  ++R       
Sbjct: 76  IAHPSLISMVRVLAQL---GHVDDAITHFKSLRAQFP--SLSPSLPLYNLLLRSTLRHHR 130

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
                 L+ +M+   V P   TFN+++  LC++   D A +L + M Q G  P+ FT   
Sbjct: 131 PGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGI 190

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           L+ G C  G V  A EL  +  S    + V  Y+ L++ +C+ +    A  L   M   G
Sbjct: 191 LVRGLCRAGLVKQALELVNNNNSCRIANRVV-YNTLVSRFCREEMNNEAERLVERMNELG 249

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG----VAADTWTYRTFIDGLCKNGYI 325
           + PDVV  N+    L    +V  A ++F +MQ +        +  T+   + G CK+G +
Sbjct: 250 VLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMM 309

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +A  L  T++ +     +  YN  + GL ++G L  A  +   +    + PN  TY+IM
Sbjct: 310 GDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIM 369

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + GLC +  +  AR L   M  N V P+ + +  L+ G+    +  +   +LH+M     
Sbjct: 370 MDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGC 429

Query: 446 MPDASIVSIVVDLLAKNEISLNS 468
            P+    + ++  L K   +L +
Sbjct: 430 QPNTYTCNTLLHSLWKEGRTLEA 452



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 7/266 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+         +L     PD+VT+ + I   C + +I  A  +   +   GC   + T
Sbjct: 538 VGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQT 597

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ GL   +       L +EM     E G+   P+  TY  II  LC+ G    A  
Sbjct: 598 YNALILGLGSNNQIFEIYGLKDEMK----EKGI--SPDICTYNNIITCLCEGGKAKDAIS 651

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M DK I PNV ++  +I+ F  + D+  A  LF   ++   +   + ++++ +EL 
Sbjct: 652 LLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL-YSLMFNELL 710

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G++ EA  L ++ +   +    F Y  L+   C   R+  A  L   +   G      
Sbjct: 711 AGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHA 770

Query: 241 SYSILINGYCKNKEIEGALSLYSEML 266
           S+  +I+G  K      A  L   M+
Sbjct: 771 SFMPVIDGLSKRGNKRQADELAKRMM 796


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 223/476 (46%), Gaps = 31/476 (6%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
            F +L+    +  R  +A   F+++  F   P  F Y T++  L  +   ++AL L+  M
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                     C PN  TY  ++DGLCK+G    A ++  +M D+ I PNV  YT ++   
Sbjct: 199 VAAG------CAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A   +EA +L   M D+G  P+ VT+N  +  LCK G+++EA + L ++   G     
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             Y+ L+DG     R +     + +M        V  Y+I+I G  +   IE ALS    
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  KG  PD   +NT+   L +   +ERA  L  EM +N +  D+ T    I GLCK G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG---------VL 375
           + EA+++F  +    C+  +  YN+LIDG  + GRLE A  LF  +  G          L
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 376 VPNVVTYS----IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
             N V  S     ++  +C  GQ+ KA  L   + ++ VVP+V+T++ LI G  +     
Sbjct: 493 GANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 432 KVIELLHKMKEINVMPDASIVSIVVD------------LLAKNEISLNSLPSFTVH 475
             + L  +++   + PD      ++D            +L +N +   S PS +++
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIY 608



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 199/494 (40%), Gaps = 92/494 (18%)

Query: 44  ALFTKL---RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           A+F  L   R  G       +  LV           A+  F  M     EF     P   
Sbjct: 120 AMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRM----DEFQ--SRPTAF 173

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            Y TI+  L   G +  A  L  +M      PN  TY  ++ G C      +A ++F EM
Sbjct: 174 VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEM 233

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +D+G+ PNV  + V++  LC  GK+DEA +LL  M   G  PD  TYN  L G C  GRV
Sbjct: 234 LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV 293

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A +  V ++  G    +  YS LI+G  + +  +     Y  ML + I PDVV++  +
Sbjct: 294 NEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT-------------------------- 314
             G  E  ++E A    D M++ G   DT+ Y T                          
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413

Query: 315 ---------FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
                     I GLCK G + EA+++F  +    C+  +  YN+LIDG  + GRLE A  
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARM 473

Query: 366 LFRSLPCG------------------------------------------------VLVP 377
           LF  +  G                                                 +VP
Sbjct: 474 LFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVP 533

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +VVTY+ +I GLC    +D A  LF +++   + P+ IT+  LI G +R +  +  + L 
Sbjct: 534 DVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLF 593

Query: 438 HKMKEINVMPDASI 451
             + +    P  SI
Sbjct: 594 QNILQSGSSPSLSI 607



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 221/443 (49%), Gaps = 19/443 (4%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
              +  R++ +   P+  T+  L+ GLC +    +A  +F ++   G  P+V  YT L++
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLS 250

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            LC       A+ L   M +        C P+ VTY   + GLCK G V++A + L+ ++
Sbjct: 251 SLCNAGKIDEAVQLLGSMKDKG------CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           D      +  Y+ +I G   A+ ++E    +  M+++ + P+VV + +++    + G+++
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A   LD+M + G  PD F YNT+L   C  G +  A  L   M          + +I+I
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ----- 301
            G CK   ++ A+ ++ EM   G  P V+ +N L  G +   ++E A  LF +M+     
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 302 ----RNGVAA----DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
               R  + A    D+ + R  +  +C++G +++A +L  ++       D+  YN+LI+G
Sbjct: 485 SLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCK+  L+ A+ LF+ L    + P+ +TY  +I GL    + + A  LF ++ ++   P+
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 414 VITFDMLIRGFIRINEPSKVIEL 436
           +  ++ ++R   R+ + S+ I L
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINL 627



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 215/470 (45%), Gaps = 38/470 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +LG +      PD VT+ + + GLC   R+ EA      L+  G    +  Y
Sbjct: 256 GKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGY 315

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +          ++ M   N        P+ V YT +I G  + G ++ A   
Sbjct: 316 SCLIDGLFQARRFDEGFGYYKTMLERN------ISPDVVLYTIMIRGCAEAGRIEDALSF 369

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  MK K   P+   Y +V++  C   D   A  L  EM+   +  +  T  +++  LCK
Sbjct: 370 LDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF- 240
            G +DEA ++ D M +HG  P   TYN L+DGF   GR+  A+ LF  ME MG   ++F 
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFL 488

Query: 241 -------------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
                        S   L++  C++ ++  A  L   ++  G+ PDVV +NTL  GL + 
Sbjct: 489 RLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKA 548

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             ++ A +LF E+Q  G++ D  TY T IDGL +     +A+ LF  +        +  Y
Sbjct: 549 RNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIY 608

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN------DGQMDKA-RD 400
           NS++  LC+  +L  A+ L+        +P    + +    L N      DG +D   R+
Sbjct: 609 NSMMRSLCRMKKLSQAINLWLD-----YLPKKYNFPVESEVLANAHKEIEDGSLDDGVRE 663

Query: 401 LF-LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE--INVMP 447
           L  +D E  ++  N  T  ++  G  ++      + + H ++E  I++ P
Sbjct: 664 LIKIDQEYGSISSNPYTIWLI--GLCQVRRTDDALRIFHTLQEFGIDITP 711



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 194/427 (45%), Gaps = 32/427 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV+  F  L  +    F      ++ LI GL    R  E    +  +      PDV  
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT ++ G         AL+  + M       G V  P+T  Y T++  LC  G +++A  
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKK----GFV--PDTFCYNTVLKVLCDHGDLERAHT 403

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M   N+  +  T T +I G C     +EA ++F EM + G  P V+T+N ++D   
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAF--------------TYNTLLDGFCLTGRVNHAKEL 226
           + G+++EA R+L   ++ G  P  F              +   L+   C +G+V  A +L
Sbjct: 464 REGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
             S+   G    V +Y+ LING CK + ++GA+ L+ E+  KGI PD + + TL  GL  
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR- 345
            H+   A  LF  + ++G +     Y + +  LC+   + +A+ L+      K  F +  
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVES 642

Query: 346 -----AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
                A+  + DG    G  E+ +++ +    G +  N   Y+I + GLC   + D A  
Sbjct: 643 EVLANAHKEIEDGSLDDGVREL-IKIDQEY--GSISSN--PYTIWLIGLCQVRRTDDALR 697

Query: 401 LFLDMEE 407
           +F  ++E
Sbjct: 698 IFHTLQE 704



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 185/424 (43%), Gaps = 75/424 (17%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   GF     +L+   +PD V +T +I+G     RI +A +    ++  G  PD F Y 
Sbjct: 327 RFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYN 386

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T++  LC       A  L  EM   N         ++ T T +I GLCK G VD+A ++ 
Sbjct: 387 TVLKVLCDHGDLERAHTLRSEMLQNNLVL------DSTTQTIMICGLCKRGLVDEAMQIF 440

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM---------------------- 160
            +M +    P V+TY ++I GF       EA+ LF +M                      
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDS 500

Query: 161 --------------------------MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
                                     +D GV P+VVT+N +++ LCK   +D A RL   
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           +   G+ PD  TY TL+DG     R N A  LF ++   G   ++  Y+ ++   C+ K+
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620

Query: 255 IEGALSLYSEMLSKG----IKPDVVIH-------NTLFVGLFEIHQVERAFKLFDEMQRN 303
           +  A++L+ + L K     ++ +V+ +        +L  G+ E+ ++++ +         
Sbjct: 621 LSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEY--------G 672

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
            ++++ +T   ++ GLC+     +A+ +FHTL+    +        LI+ LC    L  A
Sbjct: 673 SISSNPYT--IWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAA 730

Query: 364 LELF 367
           +++ 
Sbjct: 731 VDIM 734



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 118/261 (45%)

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+   +  +  L+      GR   A + F  M+    + T F Y+ ++     +  I  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+LY+ M++ G  P+   +N L  GL +      A K+FDEM   G+  +   Y   +  
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LC  G I EAV+L  +++   C  D   YN+ + GLCK GR+  A +    L  G     
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +  YS +I GL    + D+    +  M E  + P+V+ + ++IRG          +  L 
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 439 KMKEINVMPDASIVSIVVDLL 459
            MK+   +PD    + V+ +L
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVL 392



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 150/389 (38%), Gaps = 82/389 (21%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +   +L++    D+ T T +I GLC    + EA  +F ++   GC+P V TY
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNG-------------------------------- 89
             L++G  R      A  LF +M  GN                                 
Sbjct: 456 NALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQ 515

Query: 90  ------------EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
                       + GVV  P+ VTY T+I+GLCK   +D A  L  +++ K I P+ +TY
Sbjct: 516 VLKAYKLLRSIIDSGVV--PDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITY 573

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL----- 192
            ++I G   A   N+A  LF  ++  G  P++  +N +M  LC+  K+ +A  L      
Sbjct: 574 GTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLP 633

Query: 193 --------------------DLMIQHGVRP-----------DAFTYNTLLDGFCLTGRVN 221
                               D  +  GVR             +  Y   L G C   R +
Sbjct: 634 KKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTD 693

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  +F +++  G   T    ++LIN  C ++ +  A+ +    LSK I     + N L 
Sbjct: 694 DALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLL 753

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTW 310
             L   ++ + A  L   M   G   D +
Sbjct: 754 RWLCICYRRQDAQALAWRMHLVGYDMDVY 782



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 73/161 (45%)

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
           H  E  F    + +  G+ A +  +   +      G   +AV+ F  +   +       Y
Sbjct: 116 HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVY 175

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+++  L  SG + +AL L+  +      PN  TY++++ GLC  G    A  +F +M +
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             ++PNV  + +L+       +  + ++LL  MK+   +PD
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPD 276


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 232/532 (43%), Gaps = 76/532 (14%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V   +LK     +     SLI G C   ++ E   L   +R    +PD ++
Sbjct: 185 VGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYS 244

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TLV+G CR   +  A N+ ++M           EP  VTY T++ GLC+ G    A  
Sbjct: 245 YCTLVDGYCRDGLSSKAFNVCDQMLRKG------IEPTVVTYNTLLKGLCRFGDYKDALR 298

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M  + + PN V Y +++ G     D++ A  L+ +++ +G+  ++  FN +++ LC
Sbjct: 299 LWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLC 358

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA----------------- 223
           K G+MD A      M + G +PD  TY TL DG+C  G V  A                 
Sbjct: 359 KMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIE 418

Query: 224 ------------------KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
                              +L   M++ G    V +Y  LI G+C    ++ A S Y EM
Sbjct: 419 MYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEM 478

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM---------------QRNGVAA-DT 309
           + KG  P+V+I + +   L+ + +++ A  L  +M               Q   +   D 
Sbjct: 479 IGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDC 538

Query: 310 W-------------------TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           W                    Y   + GLCK+G + +A   F  L       D   Y +L
Sbjct: 539 WKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTL 598

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I G   +G +  A  L   +    LVPN+ TY+ ++ GLC  G +D+AR LF  +    +
Sbjct: 599 IHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGL 658

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +PNV+T+++LI G+ +   P + ++L  KM +  + P     S +++   K 
Sbjct: 659 IPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQ 710



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 235/518 (45%), Gaps = 77/518 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V +   V   + K    P   +  SL+  L        A  ++ ++R     PDVFT 
Sbjct: 10  GMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTC 69

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +VN  C+      A+    EM     + G   E N V+Y +++DG    G ++ AK +
Sbjct: 70  AIMVNAYCKAGKVERAVEFVREME----KLGF--ELNAVSYNSLVDGYVSLGDIEGAKGV 123

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM-MDQGVQPNVVTFNVIMDELC 180
           L  M +K +  N VT T +I+G+C      EA+++  EM  + GV  +   +  ++D  C
Sbjct: 124 LKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYC 183

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GKM +A R+ D M++ G++ + F  N+L++G+C  G+V+  + L + M  +  K   +
Sbjct: 184 KVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSY 243

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV------------------ 282
           SY  L++GYC++     A ++  +ML KGI+P VV +NTL                    
Sbjct: 244 SYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLM 303

Query: 283 -----------------GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
                            GLF++    RA  L+D++   G+    + + T I+GLCK G +
Sbjct: 304 LQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEM 363

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA---------------LELFRSL 370
             A E F  +  L C+ D   Y +L DG CK G +E A               +E++ SL
Sbjct: 364 DGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSL 423

Query: 371 PCGV--------------------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
             G+                    L PNVVTY  +I G C+ G++DKA   + +M     
Sbjct: 424 IVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGF 483

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            PNVI    ++    R+    +   LL KM + +++ D
Sbjct: 484 APNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLD 521



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 222/485 (45%), Gaps = 26/485 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG  S    +   IL          F ++I GLC    +  A   F ++   GC+PD  T
Sbjct: 325 MGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGIT 384

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL +G C+        N+ E              P+   Y ++I GL     + K  +
Sbjct: 385 YRTLSDGYCKVG------NVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLID 438

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M  + + PNVVTY ++I G+C     ++A   + EM+ +G  PNV+  + I+  L 
Sbjct: 439 LLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLY 498

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN---HAKELFVSMESMGCKH 237
           + G++DEA+ LL  M+          ++ +LD  CL    N      + +   +++    
Sbjct: 499 RLGRIDEANMLLQKMVD---------FDLVLDHRCLEDFQNADIRKLDCWKIADTLDESA 549

Query: 238 TVFS------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             FS      Y+I + G CK+ ++  A   +  +      PD   + TL  G      V 
Sbjct: 550 IKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVN 609

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            AF L DEM   G+  +  TY   ++GLCK+GY+  A  LF  L +     ++  YN LI
Sbjct: 610 EAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILI 669

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG CKSG    AL+L   +    + P+++TYS +I G C    +++A  L  +M+ + V 
Sbjct: 670 DGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVD 729

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
             + TF  L+ G I+  +  K+ + LH M  +   P A I S     L++   +   L S
Sbjct: 730 QTIATFSKLVEGCIQHGDVKKMSK-LHNMMHM-ACPSAGITSHKQMELSELSNAKEMLDS 787

Query: 472 FTVHE 476
           +T+ E
Sbjct: 788 YTISE 792



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 220/439 (50%), Gaps = 8/439 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++K    +  +  A  +F  +  +G +P + +  +L++ L +   +  A+ ++++M    
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMR--- 58

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
               +V  P+  T   +++  CK G V++A E + +M+    + N V+Y S++ G+    
Sbjct: 59  -RLDIV--PDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLG 115

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHGVRPDAFTY 207
           D   AK +   M ++GV  N VT  +++   CK  K++EA ++L ++  + GV  D + Y
Sbjct: 116 DIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAY 175

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             L+DG+C  G++  A  +   M  +G K  +F  + LINGYCKN ++     L   M  
Sbjct: 176 GALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRK 235

Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
             +KPD   + TL  G        +AF + D+M R G+     TY T + GLC+ G   +
Sbjct: 236 LDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKD 295

Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
           A+ L+H +       +   Y +L+DGL K G    AL L+  +    +  ++  ++ MI 
Sbjct: 296 ALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMIN 355

Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           GLC  G+MD A++ F  MEE    P+ IT+  L  G+ ++    +  ++  KM++  + P
Sbjct: 356 GLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFP 415

Query: 448 DASIV-SIVVDLLAKNEIS 465
              +  S++V L    +IS
Sbjct: 416 SIEMYNSLIVGLFTSKKIS 434



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 36/324 (11%)

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           +I+    + G +  A  + D M ++G +P   + N+LL      G    A  ++  M  +
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL---FVGLFEIH-- 288
                VF+ +I++N YCK  ++E A+    EM   G + + V +N+L   +V L +I   
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 289 ------------------------------QVERAFKLFDEMQR-NGVAADTWTYRTFID 317
                                         +VE A K+  EM++ +GV  D + Y   ID
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G CK G + +A+ +   +  +  + ++   NSLI+G CK+G++     L   +    L P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +  +Y  ++ G C DG   KA ++   M    + P V+T++ L++G  R  +    + L 
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 438 HKMKEINVMPDASIVSIVVDLLAK 461
           H M +  V P+      ++D L K
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFK 324



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           +++  Y +   ++ AL ++  M   G KP +   N+L   L +  +   A  ++D+M+R 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
            +  D +T    ++  CK G +  AVE    +  L  E +  +YNSL+DG    G +E A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVPNVITFDMLIR 422
             + + +    ++ N VT +++I G C   ++++A  +  +ME E+ VV +   +  LI 
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           G+ ++ +    I +  +M ++ +  +  + + +++   KN
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKN 220


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 226/438 (51%), Gaps = 6/438 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D VT ++L+ GLC + R  EA ALF ++   G  P+  TY TL++ L +       L+L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            EM +     GVV +   VTYT ++D L K+G  D+ K+ L      N+  N VTYT +I
Sbjct: 333 GEMVS----RGVVMD--LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLI 386

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
              C A + +EA+++ +EM ++ + PNVVTF+ +++   K G +D+A+    +M + G+ 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TY TL+DGF      + A E++  M   G +   F    L+NG  +N +IE A++L
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +    G+  D V + TL  GLF+   +  AFK   E+    +  D   Y  FI+ LC 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCI 566

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G   EA  +   +R +  + D   YN++I   C+ G    AL+L   +    + PN++T
Sbjct: 567 LGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+ ++ GL   G ++KA+ L  +M      P+ +T   +++   +      ++++   M 
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 442 EINVMPDASIVSIVVDLL 459
              +  D ++ + ++ +L
Sbjct: 687 NAGLHADITVYNTLLQVL 704



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 241/533 (45%), Gaps = 72/533 (13%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           VL  + +   +P+ VTF+S+I G      + +A      ++  G  P+V TY TL++G  
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460

Query: 70  RTSHTIVALNLFEEM---------------ANGNGEFGVVCEP--------------NTV 100
           +      AL ++ +M                NG  + G + E               + V
Sbjct: 461 KFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            YTT+IDGL K G +  A +   ++ D+N+ P+ V Y   I   C    + EAK +  EM
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEM 580

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            + G++P+  T+N ++   C+ G+  +A +LL  M    ++P+  TYNTL+ G   TG V
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             AK L   M S G   +  ++  ++    +++ ++  L ++  M++ G+  D+ ++NTL
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L       +A  + +EM  +G+A DT T+   I G CK+ ++  A   +  +     
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 341 EFDIRAYNSLIDGLCKSGRL----EIALELFRS--------------------------- 369
             +I  +N+L+ GL   GR+     + +E+ +S                           
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMR 820

Query: 370 LPCGVL----VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           L C ++    VP V TY+ +I      G M +A++LF DM++  V P   T+D+L+ G+ 
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           RI   ++V + L  MKE    P    +S +    +K        P  T   Q+
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK--------PGMTWQAQR 925



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 227/516 (43%), Gaps = 81/516 (15%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP-DVFTYTT 63
           +H   VL  + K     D VT  +L+ GLC   ++  AAAL    R  G    DV  + T
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNT 174

Query: 64  LVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           L+ G CR   T  AL++ + M A G          + V Y T++ G C+ G VD A+ +L
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQG-------LPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             MK+  + PNV TYT  I  +C  K   EA  L+  M+  GV  +VVT + ++  LC++
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-------- 234
           G+  EA  L   M + G  P+  TY TL+D     GR      L   M S G        
Sbjct: 288 GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 235 ---------------CKHTV------------FSYSILINGYCKNKEIEGALSLYSEMLS 267
                           K T+             +Y++LI+  CK   ++ A  +  EM  
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 268 K-----------------------------------GIKPDVVIHNTLFVGLFEIHQVER 292
           K                                   GI P+VV + TL  G F+    + 
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A +++ +M   GV  + +   + ++GL +NG I EA+ LF          D   Y +LID
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GL K+G +  A +  + L    ++P+ V Y++ I  LC  G+  +A+ +  +M    + P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKP 587

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +  T++ +I    R  E +K ++LLH+MK  ++ P+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 199/446 (44%), Gaps = 18/446 (4%)

Query: 19  FTP-DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           F P D  +  +L+   C    +  A AL    R     P    Y  L+  L   +H   A
Sbjct: 68  FRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAH---A 119

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP-NVVT 136
             +  EM      F      + VT  T++ GLC+ G VD A  L    +   I   +V+ 
Sbjct: 120 PAVLAEMCKRGVPF------DGVTVNTLLAGLCRNGQVDAAAAL--ADRGGGIHALDVIG 171

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           + ++I G+C   D   A  +   M  QG+  +VV +N ++   C+ G++D A  +LD+M 
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + GV P+  TY   +  +C T  V  A +L+  M   G    V + S L+ G C++    
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A +L+ EM   G  P+ V + TL   L +  + +    L  EM   GV  D  TY   +
Sbjct: 292 EAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           D L K G   E  +            +   Y  LID LCK+  ++ A ++   +    + 
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PNVVT+S +I G    G +DKA +    M+E  + PNV+T+  LI GF +       +E+
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKN 462
            H M    V  +  IV  +V+ L +N
Sbjct: 472 YHDMLCEGVEVNKFIVDSLVNGLRQN 497



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 141/334 (42%), Gaps = 6/334 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G  +    +L  +  S   P+ +T+ +L+ GL     + +A  L  ++   G  P   T+
Sbjct: 603 GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTH 662

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++    ++    V L++ E M N           +   Y T++  LC  G   KA  +
Sbjct: 663 RRVLQACSQSRRLDVILDIHEWMMNAG------LHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M    I P+ +T+ ++I G C +   + A   + +M+ Q + PN+ TFN ++  L  
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ EA  +L  M + G+ P+  TY+ L+ G         A  L+  M   G    V +
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+ + K   +  A  L+ +M  +G+ P    ++ L  G   I       K   +M+
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMK 896

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             G +    T         K G   +A  L   L
Sbjct: 897 EKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 135/419 (32%), Positives = 218/419 (52%), Gaps = 6/419 (1%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
            F ++     E  V++ T +++GLC+     +   L +E+A      GV  + N VTY  
Sbjct: 212 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK----GV--KANVVTYNA 265

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
            I+G  K   +    E+L  M+ + +  NVVTYT +I GF       EA+RLF EM ++G
Sbjct: 266 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 325

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           ++ +V  +  I+   C++G +  A  L D M   G+ P A TY  L+ G C  G++  A+
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 385

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            L   M+  G       ++ LI+GYC++  ++ AL L   M  KG++ DV  +N++  GL
Sbjct: 386 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 445

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            ++++ + A  L   M   GV+ +T ++ T ID  CK G  VEA  +F  +       +I
Sbjct: 446 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 505

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN LIDG  K G ++ A +L   L    L+P+V T + +I G C DG++D A  LF +
Sbjct: 506 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 565

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           M +  +VPNV+T+  +I G  +     +  +L  +MKE  + PD ++ S +V  L   E
Sbjct: 566 MPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAE 624



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 206/397 (51%), Gaps = 6/397 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           + T ++ GLC    +     L  ++   G + +V TY   + G  +     + L    E+
Sbjct: 227 SLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR----LDLGGVAEI 282

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                + GV C  N VTYT +I G    G +++A+ L  +M++K I+ +V  YTS+I   
Sbjct: 283 LTLMEKEGVAC--NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 340

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C + +   A  LF EM D+G+ P+  T+  ++  +CK G+M+ A  L++ M   G+  + 
Sbjct: 341 CRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 400

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             +NTL+DG+C +G V+ A  L V ME  G +  VF+Y+ + +G CK    + A  L   
Sbjct: 401 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFS 460

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+ +G+ P+ +   TL     +      A ++F EM+  G   +  TY   IDG  K G 
Sbjct: 461 MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGN 520

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + EA +L   L       D+    SLI G C  G++++AL+LF  +P   LVPNVVTY+ 
Sbjct: 521 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 580

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           MI GL  DG+ ++A  L+ +M+E  + P+   +  L+
Sbjct: 581 MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/333 (34%), Positives = 186/333 (55%), Gaps = 6/333 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + VT+T LI G     +I EA  LF ++R  G E DV+ YT++++  CR+ +   AL LF
Sbjct: 294 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 353

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM +     G++  P+  TY  +I G+CK G ++ A+ L+ +M+ K I  N V + ++I
Sbjct: 354 DEMTDK----GLI--PSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 407

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C +   +EA RL + M  +G++ +V  +N I   LCK  + DEA  LL  M++ GV 
Sbjct: 408 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 467

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  ++ TL+D +C  G    AK +F  ME  G    + +Y++LI+GY K   ++ A  L
Sbjct: 468 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL 527

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             E+ ++G+ PDV    +L  G     +V+ A KLFDEM + G+  +  TY   I GL K
Sbjct: 528 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 587

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +G   EA +L+  ++      D   Y+SL+  L
Sbjct: 588 DGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 191/388 (49%), Gaps = 6/388 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G  ++  +       + VT+ + I+G      +   A + T +   G   +V TY
Sbjct: 239 GDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTY 298

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++G         A  LFEEM     E G+  E +   YT+II   C+ G V +A  L
Sbjct: 299 TLLIHGFSNIGKIEEAQRLFEEMR----EKGI--EADVYVYTSIISCNCRSGNVKRALVL 352

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M DK + P+  TY ++I G C A     A+ L  EM  +G+  N V FN ++D  C+
Sbjct: 353 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 412

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G +DEA RL  +M + G+  D F YN++  G C   R + AK L  SM   G      S
Sbjct: 413 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMS 472

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+ YCK      A  ++ EM  KG  P+++ +N L  G  +   ++ A KL DE++
Sbjct: 473 FTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELE 532

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D +T  + I G C +G +  A++LF  +       ++  Y ++I GL K GR E
Sbjct: 533 NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSE 592

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGL 389
            A +L+  +    L P+   YS ++G L
Sbjct: 593 EAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 180/341 (52%)

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            L + G VD       +M + +++  V + T V+ G C   D    ++L  E+  +GV+ 
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           NVVT+N  ++   K   +   + +L LM + GV  +  TY  L+ GF   G++  A+ LF
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G +  V+ Y+ +I+  C++  ++ AL L+ EM  KG+ P    +  L  G+ + 
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            Q+E A  L +EMQ  G+  +   + T IDG C++G + EA+ L   +     E D+ AY
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 438

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           NS+  GLCK  R + A  L  S+    + PN ++++ +I   C +G   +A+ +F +MEE
Sbjct: 439 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 498

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
              VPN+IT+++LI G+ +     +  +L  +++   ++PD
Sbjct: 499 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPD 539


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 203/401 (50%), Gaps = 11/401 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  TF  +I   C    + EA     K+   G  PD FT T+ + G CR+     A  +F
Sbjct: 191 DIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVF 250

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM N           N V+Y  +I GLC+ G +D+A  L ++MKD    PNV TYT++I
Sbjct: 251 EEMPNR----------NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALI 300

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           +G C  K+ ++A  L  EM+++ + P+++T+N ++   C+ G +D A RLL LM + G+ 
Sbjct: 301 KGLC-RKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLV 359

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TY   +D  C + RV  A+ LF S+   G    V  YS+LI+GYCK  +++ A  L
Sbjct: 360 PDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCL 419

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
           + +MLSK   P+    N L  GL     ++ A  LFD+M + G+    +T+   I  + K
Sbjct: 420 FEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLK 479

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G   +A +    +     +   R YN+ I+  C +G+++ A ++   +    + P+  T
Sbjct: 480 QGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFT 539

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           Y+ +I      G    A D+   M +    P+  TF  LI+
Sbjct: 540 YTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIK 580



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 226/457 (49%), Gaps = 29/457 (6%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R+ +     + V++  LI GLC   RI EA +LF +++   C P+V+TYT L+ GLCR  
Sbjct: 248 RVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-K 306

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
           +   A+ L +EM   N        P+ +TY ++I G C+ G +D A  LL  MK++ + P
Sbjct: 307 NVHKAMGLLDEMLERN------LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVP 360

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +  TY   I   C +    EA+RLF  + ++GV  NV+ ++V++D  CK GK+DEA  L 
Sbjct: 361 DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLF 420

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           + M+     P+A+T+N L+ G C  G +  A  LF  M  MG K TV++++ILI    K 
Sbjct: 421 EKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQ 480

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            + + A     +M+S G KP    +N          +V+ A  +  +M+  GV  D +TY
Sbjct: 481 GDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTY 540

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC-------KSGRLEI-AL 364
            + I    K G    A ++  ++    CE     + SLI  L        KSG   + ++
Sbjct: 541 TSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESV 600

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
             F  +P G  +  ++ + I+I             +LF +ME++   P+   ++ LI G 
Sbjct: 601 SNFGDVP-GSNMWKMMEFDIVI-------------ELFEEMEKHGCTPDSKCYEKLISGI 646

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            ++      ++LL +M++  + P   + + V+    K
Sbjct: 647 CKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCK 683



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 195/407 (47%), Gaps = 19/407 (4%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV--------------T 101
           PD    + +   + +   T ++L  + E+      FG+V E N +              T
Sbjct: 135 PDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYT 194

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           +  +I+  CK GFV +AK+ + +M    + P+  T TS I G+C +KD + A R+F EM 
Sbjct: 195 FNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP 254

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           ++    N V++N ++  LC+ G++DEA  L   M      P+ +TY  L+ G C    V+
Sbjct: 255 NR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVH 309

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  L   M        + +Y+ LI G C+   ++ A  L S M  +G+ PD   +    
Sbjct: 310 KAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFI 369

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             L + ++VE A +LFD +   GV+A+   Y   IDG CK G + EA  LF  +    C 
Sbjct: 370 DFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCS 429

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            +   +N+LI GLC +G L+ AL LF  +    L P V T++I+IG +   G  D A   
Sbjct: 430 PNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKC 489

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
              M  +   P   T++  I  +    +  +  +++ +MKE  V PD
Sbjct: 490 LQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPD 536



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 213/490 (43%), Gaps = 36/490 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +  R+   C  P+  T+T+LIKGLC ++ + +A  L  ++      PD+ TY
Sbjct: 272 GRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITY 330

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ G CR  H   A  L   M     E G+V  P+  TY   ID LCK   V++A+ L
Sbjct: 331 NSLIAGQCRAGHLDSAYRLLSLMK----ERGLV--PDQRTYGCFIDFLCKSNRVEEARRL 384

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              + ++ +  NV+ Y+ +I G+C     +EA  LF +M+ +   PN  TFN ++  LC 
Sbjct: 385 FDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCS 444

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + EA  L D M++ G++P  +T+N L+      G  + A +    M S G K    +
Sbjct: 445 AGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVART 504

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  I  YC   +++ A  +  +M  +G+ PD   + +L     ++     AF +   M 
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMF 564

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVE-----------------------------AVELF 332
                    T+ + I  L    Y+VE                              +ELF
Sbjct: 565 DADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELF 624

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +    C  D + Y  LI G+CK   L IAL+L   +    + P+ + ++ +I   C  
Sbjct: 625 EEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKL 684

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
            +  +A ++  DM  +   P +     LI G     E  +   +  K++      D    
Sbjct: 685 QKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAW 744

Query: 453 SIVVDLLAKN 462
            I++D + K 
Sbjct: 745 KILIDGMLKQ 754



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 193/450 (42%), Gaps = 35/450 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   + +L  + +    PD  T+   I  LC  +R+ EA  LF  L   G   +V  Y
Sbjct: 341 GHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMY 400

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++G C+      A  LFE+M + N      C PN  T+  +I GLC  G + +A  L
Sbjct: 401 SVLIDGYCKVGKVDEAGCLFEKMLSKN------CSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM    +KP V T+  +I       D+++A +   +MM  G +P   T+N  ++  C 
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK+ EA  ++  M + GV PD FTY +L+  +   G    A ++  SM    C+ +  +
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHT 574

Query: 242 YSILI-----------------------------NGYCKNKEIEGALSLYSEMLSKGIKP 272
           +  LI                             +   K  E +  + L+ EM   G  P
Sbjct: 575 FLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTP 634

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D   +  L  G+ ++  +  A KL D+MQ+ G++     +   I   CK     EA  + 
Sbjct: 635 DSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIV 694

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +        +    +LI GL + G  E    +F+ L       + + + I+I G+   
Sbjct: 695 EDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQ 754

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           G +++   LF +ME+N    +  T+ +L +
Sbjct: 755 GLVEEFSQLFEEMEKNGCNFSPRTYSILTQ 784



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 173/383 (45%), Gaps = 35/383 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +  ++L    +P+A TF +LI GLC+   + EA +LF ++   G +P V+T
Sbjct: 410 VGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYT 469

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  L+  + +      A    ++M + +GE     +P   TY   I+  C  G V +A++
Sbjct: 470 FNILIGRMLKQGDFDDAHKCLQKMMS-SGE-----KPVARTYNAFIEVYCSAGKVQEAED 523

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +++QMK++ + P+  TYTS+I+ +        A  +   M D   +P+  TF  ++ +L 
Sbjct: 524 MMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLF 583

Query: 181 KNGKMDEAS-----------------------------RLLDLMIQHGVRPDAFTYNTLL 211
               + E S                              L + M +HG  PD+  Y  L+
Sbjct: 584 DKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLI 643

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C    +  A +L   M+  G   +   ++ +I+  CK ++   A ++  +M+  G  
Sbjct: 644 SGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHS 703

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P +    TL  GL+E  + ER   +F +++  G   D   ++  IDG+ K G + E  +L
Sbjct: 704 PQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQL 763

Query: 332 FHTLRILKCEFDIRAYNSLIDGL 354
           F  +    C F  R Y+ L   L
Sbjct: 764 FEEMEKNGCNFSPRTYSILTQKL 786



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 26/342 (7%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM---------------------DQGVQP 167
           N K NV +Y S++    + K  ++  ++ + M+                     D   + 
Sbjct: 96  NFKHNVDSYASLLTLIDHHKIVSDVPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKL 155

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           ++  +N ++  L + G +DE ++L   M++  V  D +T+N +++ +C  G V  AK+  
Sbjct: 156 SLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFM 215

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G     F+ +  I GYC++K+++ A  ++ EM ++    + V +N L  GL E 
Sbjct: 216 CKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEA 271

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            +++ A  LF  M+ +    + +TY   I GLC+   + +A+ L   +       D+  Y
Sbjct: 272 GRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITY 330

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           NSLI G C++G L+ A  L   +    LVP+  TY   I  LC   ++++AR LF  + E
Sbjct: 331 NSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTE 390

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
             V  NVI + +LI G+ ++ +  +   L  KM   N  P+A
Sbjct: 391 EGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNA 432



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 5/202 (2%)

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           LY+EML + +  D+   N +     ++  V+ A +   +M + G++ D +T  +FI G C
Sbjct: 179 LYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYC 238

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           ++  +  A  +F  +       +  +YN LI GLC++GR++ A+ LF  +      PNV 
Sbjct: 239 RSKDVDSAFRVFEEMP----NRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVY 294

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ +I GLC    + KA  L  +M E  +VP++IT++ LI G  R         LL  M
Sbjct: 295 TYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLM 353

Query: 441 KEINVMPDASIVSIVVDLLAKN 462
           KE  ++PD       +D L K+
Sbjct: 354 KERGLVPDQRTYGCFIDFLCKS 375


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 223/476 (46%), Gaps = 31/476 (6%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
            F +L+    +  R  +A   F+++  F   P  F Y T++  L  +   ++AL L+  M
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                     C PN  TY  ++DGLCK+G    A ++  +M D+ I PNV  YT ++   
Sbjct: 199 VAAG------CAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A   +EA +L   M D+G  P+ VT+N  +  LCK G+++EA + L ++   G     
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             Y+ L+DG     R +     + +M        V  Y+I+I G  +   IE ALS    
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  KG  PD   +NT+   L +   +ERA  L  EM +N +  D+ T    I GLCK G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG---------VL 375
           + EA+++F  +    C+  +  YN+LIDG  + GRLE A  LF  +  G          L
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 376 VPNVV----TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
             N V    +   ++  +C  GQ+ KA  L   + ++ VVP+V+T++ LI G  +     
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 432 KVIELLHKMKEINVMPDASIVSIVVD------------LLAKNEISLNSLPSFTVH 475
             + L  +++   + PD      ++D            +L +N +   S PS +++
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIY 608



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 200/494 (40%), Gaps = 92/494 (18%)

Query: 44  ALFTKL---RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           A+F  L   R  G       +  LV           A+  F  M     EF     P   
Sbjct: 120 AMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRM----DEFQ--SRPTAF 173

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            Y TI+  L   G +  A  L  +M      PN  TY  ++ G C      +A ++F EM
Sbjct: 174 VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEM 233

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +D+G+ PNV  + V++  LC  GK+DEA +LL  M   G  PD  TYN  L G C  GRV
Sbjct: 234 LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV 293

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           N A +  V ++  G    +  YS LI+G  + +  +     Y  ML + I PDVV++  +
Sbjct: 294 NEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT-------------------------- 314
             G  E  ++E A    D M++ G   DT+ Y T                          
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413

Query: 315 ---------FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
                     I GLCK G + EA+++F  +    C+  +  YN+LIDG  + GRLE A  
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARM 473

Query: 366 LF------------------------------------------------RSLPCGVLVP 377
           LF                                                RS+    +VP
Sbjct: 474 LFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVP 533

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +VVTY+ +I GLC    +D A  LF +++   + P+ IT+  LI G +R +  +  + L 
Sbjct: 534 DVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLF 593

Query: 438 HKMKEINVMPDASI 451
             + +    P  SI
Sbjct: 594 QNILQSGSSPSLSI 607



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 221/443 (49%), Gaps = 19/443 (4%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
              +  R++ +   P+  T+  L+ GLC +    +A  +F ++   G  P+V  YT L++
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLS 250

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
            LC       A+ L   M +        C P+ VTY   + GLCK G V++A + L+ ++
Sbjct: 251 SLCNAGKIDEAVQLLGSMKDKG------CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           D      +  Y+ +I G   A+ ++E    +  M+++ + P+VV + +++    + G+++
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           +A   LD+M + G  PD F YNT+L   C  G +  A  L   M          + +I+I
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ----- 301
            G CK   ++ A+ ++ EM   G  P V+ +N L  G +   ++E A  LF +M+     
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 302 ----RNGVAA----DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
               R  + A    D+ + R  +  +C++G +++A +L  ++       D+  YN+LI+G
Sbjct: 485 SLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
           LCK+  L+ A+ LF+ L    + P+ +TY  +I GL    + + A  LF ++ ++   P+
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 414 VITFDMLIRGFIRINEPSKVIEL 436
           +  ++ ++R   R+ + S+ I L
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINL 627



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 214/470 (45%), Gaps = 38/470 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +LG +      PD VT+ + + GLC   R+ EA      L+  G    +  Y
Sbjct: 256 GKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGY 315

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GL +          ++ M   N        P+ V YT +I G  + G ++ A   
Sbjct: 316 SCLIDGLFQARRFDEGFGYYKTMLERN------ISPDVVLYTIMIRGCAEAGRIEDALSF 369

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  MK K   P+   Y +V++  C   D   A  L  EM+   +  +  T  +++  LCK
Sbjct: 370 LDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF- 240
            G +DEA ++ D M +HG  P   TYN L+DGF   GR+  A+ LF  ME MG   ++F 
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFL 488

Query: 241 -------------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
                        S   L++  C++ ++  A  L   ++  G+ PDVV +NTL  GL + 
Sbjct: 489 RLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKA 548

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             ++ A +LF E+Q  G++ D  TY T IDGL +     +A+ LF  +        +  Y
Sbjct: 549 RNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIY 608

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN------DGQMDKA-RD 400
           NS++  LC+  +L  A+ L+        +P    + +    L N      DG +D   R+
Sbjct: 609 NSMMRSLCRMKKLSQAINLWLD-----YLPKKYNFPVESEVLANAHKEIEDGSLDDGVRE 663

Query: 401 LF-LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE--INVMP 447
           L  +D E   +  N  T  ++  G  ++      + + H ++E  I++ P
Sbjct: 664 LIKIDQEYGYISSNPYTIWLI--GLCQVRRTDDALRIFHTLQEFGIDITP 711



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 194/427 (45%), Gaps = 32/427 (7%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV+  F  L  +    F      ++ LI GL    R  E    +  +      PDV  
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT ++ G         AL+  + M       G V  P+T  Y T++  LC  G +++A  
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKK----GFV--PDTFCYNTVLKVLCDHGDLERAHT 403

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M   N+  +  T T +I G C     +EA ++F EM + G  P V+T+N ++D   
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAF--------------TYNTLLDGFCLTGRVNHAKEL 226
           + G+++EA R+L   ++ G  P  F              +   L+   C +G+V  A +L
Sbjct: 464 REGRLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
             S+   G    V +Y+ LING CK + ++GA+ L+ E+  KGI PD + + TL  GL  
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR- 345
            H+   A  LF  + ++G +     Y + +  LC+   + +A+ L+      K  F +  
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVES 642

Query: 346 -----AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
                A+  + DG    G  E+ +++ +    G +  N   Y+I + GLC   + D A  
Sbjct: 643 EVLANAHKEIEDGSLDDGVREL-IKIDQEY--GYISSN--PYTIWLIGLCQVRRTDDALR 697

Query: 401 LFLDMEE 407
           +F  ++E
Sbjct: 698 IFHTLQE 704



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 181/424 (42%), Gaps = 75/424 (17%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   GF     +L+   +PD V +T +I+G     RI +A +    ++  G  PD F Y 
Sbjct: 327 RFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYN 386

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T++  LC       A  L  EM   N         ++ T T +I GLCK G VD+A ++ 
Sbjct: 387 TVLKVLCDHGDLERAHTLRSEMLQNNLVL------DSTTQTIMICGLCKRGLVDEAMQIF 440

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM---------------------- 160
            +M +    P V+TY ++I GF       EA+ LF +M                      
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDS 500

Query: 161 --------------------------MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
                                     +D GV P+VVT+N +++ LCK   +D A RL   
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           +   G+ PD  TY TL+DG     R N A  LF ++   G   ++  Y+ ++   C+ K+
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620

Query: 255 IEGALSLYSEMLSKG----IKPDVVIH-------NTLFVGLFEIHQVERAFKLFDEMQRN 303
           +  A++L+ + L K     ++ +V+ +        +L  G+ E+ ++++ +         
Sbjct: 621 LSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYI------ 674

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
                +  Y  ++ GLC+     +A+ +FHTL+    +        LI+ LC    L  A
Sbjct: 675 ----SSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAA 730

Query: 364 LELF 367
           +++ 
Sbjct: 731 VDIM 734



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 118/261 (45%)

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+   +  +  L+      GR   A + F  M+    + T F Y+ ++     +  I  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           L+LY+ M++ G  P+   +N L  GL +      A K+FDEM   G+  +   Y   +  
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LC  G I EAV+L  +++   C  D   YN+ + GLCK GR+  A +    L  G     
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           +  YS +I GL    + D+    +  M E  + P+V+ + ++IRG          +  L 
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 439 KMKEINVMPDASIVSIVVDLL 459
            MK+   +PD    + V+ +L
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVL 392



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 150/387 (38%), Gaps = 78/387 (20%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +   +L++    D+ T T +I GLC    + EA  +F ++   GC+P V TY
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGE-------FGV--VCE---------------- 96
             L++G  R      A  LF +M  GN          G   VC+                
Sbjct: 456 NALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQ 515

Query: 97  -----------------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
                            P+ VTY T+I+GLCK   +D A  L  +++ K I P+ +TY +
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL------- 192
           +I G   A   N+A  LF  ++  G  P++  +N +M  LC+  K+ +A  L        
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635

Query: 193 ------------------DLMIQHGVRP-----------DAFTYNTLLDGFCLTGRVNHA 223
                             D  +  GVR             +  Y   L G C   R + A
Sbjct: 636 YNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDA 695

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
             +F +++  G   T    ++LIN  C ++ +  A+ +    LSK I     + N L   
Sbjct: 696 LRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRW 755

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTW 310
           L   ++ + A  L   M   G   D +
Sbjct: 756 LCICYRRQDAQALAWRMHLVGYDMDVY 782



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 73/161 (45%)

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
           H  E  F    + +  G+ A +  +   +      G   +AV+ F  +   +       Y
Sbjct: 116 HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVY 175

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           N+++  L  SG + +AL L+  +      PN  TY++++ GLC  G    A  +F +M +
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             ++PNV  + +L+       +  + ++LL  MK+   +PD
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPD 276


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 222/443 (50%), Gaps = 6/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T++ L+        +     L  ++   G +P+V++YT  +  L +      A  +
Sbjct: 318 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRI 377

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             +M N        C+P+ +T+T +I  LC  G +  AK++  +MK  + KP+ VTY ++
Sbjct: 378 LAKMENEG------CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 431

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  F    D      ++  M   G   NVV +  ++D LC+ G++ EA  + D M Q G+
Sbjct: 432 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 491

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+ ++YN+L+ GF    R   A ELF  M+  G K   +++ + IN Y K+ E   A+ 
Sbjct: 492 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 551

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            Y  M SKGI PDVV  N +  GL +  ++  A ++F E++  GV+ DT TY   I    
Sbjct: 552 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 611

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K     EAV++F+ +    C  D+ A NSLID L K+GR + A  +F  L    L P   
Sbjct: 612 KASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDG 671

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ GL  +G++ +   L  +M  +   PN+IT++ ++    +    +  +++L+ M
Sbjct: 672 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 731

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
                +PD S  + V+  L K E
Sbjct: 732 TTKGCIPDLSSYNTVIYGLVKEE 754



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 224/446 (50%), Gaps = 6/446 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     V   + +     +  TF ++  GL  E  +  A      ++  G   + +TY
Sbjct: 229 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 288

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV  L ++     AL ++  M       GVV  P+  TY+ ++    K   V+    L
Sbjct: 289 NGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVLWL 342

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   +KPNV +YT  IR    AK ++EA R+  +M ++G +P+V+T  V++  LC 
Sbjct: 343 LREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCD 402

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ +A  +   M +   +PD  TY TLLD F   G      E++ +M++ G    V +
Sbjct: 403 AGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVA 462

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+  C+   +  AL ++ EM  KGI P+   +N+L  G  +  +   A +LF  M 
Sbjct: 463 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 522

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   + +T+  FI+   K+G  ++A++ +  ++      D+ A N+++ GL KSGRL 
Sbjct: 523 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 582

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A  +F  L    + P+ +TY++MI       + D+A  +F DM EN  VP+V+  + LI
Sbjct: 583 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 642

Query: 422 RGFIRINEPSKVIELLHKMKEINVMP 447
               +     +   + +++KE+N+ P
Sbjct: 643 DTLYKAGRGDEAWRIFYQLKEMNLEP 668



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 230/448 (51%), Gaps = 12/448 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R    + +L ++      PD +T T LI+ LC   RI +A  +F K++    +PD  TY 
Sbjct: 370 RFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI 429

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TL++       +   + ++  M A+G  +       N V YT +ID LC+ G V +A E+
Sbjct: 430 TLLDKFGDNGDSQSVMEIWNAMKADGYND-------NVVAYTAVIDALCQVGRVFEALEM 482

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK K I P   +Y S+I GF  A  + +A  LF  M   G +PN  T  + ++   K
Sbjct: 483 FDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGK 542

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+  +A +  +LM   G+ PD    N +L G   +GR+  AK +F  +++MG      +
Sbjct: 543 SGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTIT 602

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+++I    K  + + A+ ++ +M+     PDV+  N+L   L++  + + A+++F +++
Sbjct: 603 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 662

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +     TY T + GL + G + E + L   +       ++  YN+++D LCK+G + 
Sbjct: 663 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 722

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL++  S+     +P++ +Y+ +I GL  + + ++A  +F  M++  ++P+  T   ++
Sbjct: 723 DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYATLCTIL 781

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA 449
             F++I     + E LH +K+  + P +
Sbjct: 782 PSFVKI---GLMKEALHIIKDYFLQPGS 806



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 211/442 (47%), Gaps = 8/442 (1%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD +   SLI  L    R  EA  +F +L+    EP   TY TL+ GL R       ++L
Sbjct: 633  PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 692

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EEM + N        PN +TY TI+D LCK G V+ A ++L  M  K   P++ +Y +V
Sbjct: 693  LEEMYHSN------YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 746

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHG 199
            I G    + +NEA  +F +M  + + P+  T   I+    K G M EA  ++ D  +Q G
Sbjct: 747  IYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPG 805

Query: 200  VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             + D  + ++L++G      +  + E    + S G     F    LI   CK K+   A 
Sbjct: 806  SKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 865

Query: 260  SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             L  +  S G+     ++N+L  GL + + ++ A  LF EM+  G   D +TY   +D +
Sbjct: 866  ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 925

Query: 320  CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
             K+  I E +++   +     E     YN++I GL KS RLE A++L+ +L      P  
Sbjct: 926  GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 985

Query: 380  VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             TY  ++ GL   G+++ A +LF +M E     N   +++L+ G        KV  L   
Sbjct: 986  CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 1045

Query: 440  MKEINVMPDASIVSIVVDLLAK 461
            M +  + PD    +I++D L K
Sbjct: 1046 MVDQGINPDIKSYTIIIDTLCK 1067



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 183/365 (50%), Gaps = 6/365 (1%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            I  S  T D      LIK LC + + +EA  L  K + FG       Y +L+ GL   + 
Sbjct: 836  IASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENL 895

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              +A  LF EM     E G  C P+  TY  ++D + K   +++  ++  +M  K  +  
Sbjct: 896  IDIAEGLFAEMK----ELG--CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYEST 949

Query: 134  VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             VTY ++I G   ++   +A  L+  +M QG  P   T+  ++D L K G++++A  L +
Sbjct: 950  YVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFN 1009

Query: 194  LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
             M+++G + +   YN LL+G  + G       LF  M   G    + SY+I+I+  CK  
Sbjct: 1010 EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1069

Query: 254  EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++   L+ + ++L  G++PD++ +N L  GL +  ++E A  LF+EMQ+ G+  + +TY 
Sbjct: 1070 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1129

Query: 314  TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
            + I  L K G   EA +++  L     + ++  YN+LI G   SG  + A   +  +  G
Sbjct: 1130 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1189

Query: 374  VLVPN 378
              +PN
Sbjct: 1190 GCLPN 1194



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 208/439 (47%), Gaps = 32/439 (7%)

Query: 16   KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
            K C  PD  ++ ++I GL  E R  EA ++F +++     PD  T  T++    +     
Sbjct: 734  KGCI-PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMK 791

Query: 76   VALNLFEEMANGNG-------------------------EFGVVCEPNTVTYT-----TI 105
             AL++ ++     G                         EF  +   + +T        +
Sbjct: 792  EALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPL 851

Query: 106  IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
            I  LCK+    +A EL+ + K   +      Y S+I G       + A+ LF EM + G 
Sbjct: 852  IKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC 911

Query: 166  QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
             P+  T+N+++D + K+ +++E  ++ + M + G      TYNT++ G   + R+  A +
Sbjct: 912  GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAID 971

Query: 226  LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            L+ ++ S G   T  +Y  L++G  K   IE A +L++EML  G K +  I+N L  G  
Sbjct: 972  LYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 1031

Query: 286  EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                 E+   LF +M   G+  D  +Y   ID LCK G + + +  F  L  +  E D+ 
Sbjct: 1032 IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1091

Query: 346  AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
             YN LIDGL KS RLE A+ LF  +    +VPN+ TY+ +I  L   G+  +A  ++ ++
Sbjct: 1092 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151

Query: 406  EENAVVPNVITFDMLIRGF 424
                  PNV T++ LIRG+
Sbjct: 1152 LTKGWKPNVFTYNALIRGY 1170



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 215/455 (47%), Gaps = 22/455 (4%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G+V     +L  +  S + P+ +T+ +++  LC    + +A  +   +   GC PD+ +Y
Sbjct: 684  GKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSY 743

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             T++ GL +      A ++F +M         V  P+  T  TI+    K G +   KE 
Sbjct: 744  NTVIYGLVKEERYNEAFSIFCQMKK-------VLIPDYATLCTILPSFVKIGLM---KEA 793

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE--------MMDQGVQPNVVTFN 173
            L  +KD  ++P     +   R  C++      K+  IE        +   G+  +     
Sbjct: 794  LHIIKDYFLQPG----SKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLC 849

Query: 174  VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
             ++  LCK  K  EA  L+      GV      YN+L+ G      ++ A+ LF  M+ +
Sbjct: 850  PLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL 909

Query: 234  GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
            GC    F+Y++L++   K+  IE  L +  EM  KG +   V +NT+  GL +  ++E+A
Sbjct: 910  GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 969

Query: 294  FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
              L+  +   G +    TY   +DGL K G I +A  LF+ +    C+ +   YN L++G
Sbjct: 970  IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 1029

Query: 354  LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
               +G  E    LF+ +    + P++ +Y+I+I  LC  GQ++     F  + E  + P+
Sbjct: 1030 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 1089

Query: 414  VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +IT+++LI G  +     + + L ++M++  ++P+
Sbjct: 1090 LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPN 1124



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 214/477 (44%), Gaps = 44/477 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +   + +    P+  ++ SLI G     R  +A  LF  + + G +P+ +T
Sbjct: 473 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYT 532

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +   +N   ++  +I A+  +E M +     G+V  P+ V    ++ GL K G +  AK 
Sbjct: 533 HVLFINYYGKSGESIKAIQRYELMKSK----GIV--PDVVAGNAVLFGLAKSGRLGMAKR 586

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  ++K   + P+ +TYT +I+    A  ++EA ++F +M++    P+V+  N ++D L 
Sbjct: 587 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 646

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+ DEA R+   + +  + P   TYNTLL G    G+V     L   M        + 
Sbjct: 647 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 706

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +++  CKN  +  AL +   M +KG  PD+  +NT+  GL +  +   AF +F +M
Sbjct: 707 TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 766

Query: 301 QR-----------------------------------NGVAADTWTYRTFIDGLCKNGYI 325
           ++                                    G   D  +  + ++G+ K   I
Sbjct: 767 KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI 826

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +++E    +       D      LI  LCK  +   A EL +      +      Y+ +
Sbjct: 827 EKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSL 886

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF---IRINEPSKVIELLHK 439
           I GL ++  +D A  LF +M+E    P+  T+++L+      +RI E  KV E +H+
Sbjct: 887 ICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 943



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 183/392 (46%), Gaps = 6/392 (1%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            D  +  SL++G+  ++ I ++      +   G   D F    L+  LC+    + A  L 
Sbjct: 809  DRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 868

Query: 82   EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            ++  +    FGV  +  T  Y ++I GL  E  +D A+ L  +MK+    P+  TY  ++
Sbjct: 869  KKFKS----FGVSLK--TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 922

Query: 142  RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
                 +    E  ++  EM  +G +   VT+N I+  L K+ ++++A  L   ++  G  
Sbjct: 923  DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 982

Query: 202  PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            P   TY  LLDG    GR+  A+ LF  M   GCK     Y+IL+NG+      E    L
Sbjct: 983  PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHL 1042

Query: 262  YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
            + +M+ +GI PD+  +  +   L +  Q+      F ++   G+  D  TY   IDGL K
Sbjct: 1043 FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 1102

Query: 322  NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            +  + EAV LF+ ++      ++  YNSLI  L K+G+   A +++  L      PNV T
Sbjct: 1103 SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1162

Query: 382  YSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            Y+ +I G    G  D A   +  M     +PN
Sbjct: 1163 YNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 188/406 (46%), Gaps = 11/406 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S    V  ++ KS   PD VT+ +L+              ++  ++  G   +V  Y
Sbjct: 404 GRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAY 463

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +++ LC+      AL +F+EM     + G+V  P   +Y ++I G  K      A EL
Sbjct: 464 TAVIDALCQVGRVFEALEMFDEMK----QKGIV--PEQYSYNSLISGFLKADRFGDALEL 517

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M     KPN  T+   I  +  + +  +A + +  M  +G+ P+VV  N ++  L K
Sbjct: 518 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 577

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++  A R+   +   GV PD  TY  ++       + + A ++F  M    C   V +
Sbjct: 578 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 637

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            + LI+   K    + A  ++ ++    ++P    +NTL  GL    +V+    L +EM 
Sbjct: 638 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 697

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +    +  TY T +D LCKNG + +A+++ +++    C  D+ +YN++I GL K  R  
Sbjct: 698 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYN 757

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA----RDLFL 403
            A  +F  +   VL+P+  T   ++      G M +A    +D FL
Sbjct: 758 EAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 802



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 166/350 (47%)

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G V    E+   M+ + +K NV T+ ++  G         A      M + G+  N  T+
Sbjct: 229 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 288

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++  L K+G   EA  +  +M+  GV P   TY+ L+  F     V     L   ME+
Sbjct: 289 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 348

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G K  V+SY+I I    + K  + A  + ++M ++G KPDV+ H  L   L +  ++  
Sbjct: 349 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISD 408

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  +F +M+++    D  TY T +D    NG     +E+++ ++      ++ AY ++ID
Sbjct: 409 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 468

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            LC+ GR+  ALE+F  +    +VP   +Y+ +I G     +   A +LF  M+ +   P
Sbjct: 469 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKP 528

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           N  T  + I  + +  E  K I+    MK   ++PD    + V+  LAK+
Sbjct: 529 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 578



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 175/371 (47%), Gaps = 10/371 (2%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTS-------VIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            D   E L + +    KP V   T+       ++RG     D  E   +F  M  Q V+ 
Sbjct: 192 ADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAE---VFDVMQRQIVKA 248

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           NV TF  I   L   G +  A   L +M + G+  +A+TYN L+     +G    A E++
Sbjct: 249 NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY 308

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G   +V +YS+L+  + K +++E  L L  EM + G+KP+V  +      L + 
Sbjct: 309 RVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQA 368

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            + + A+++  +M+  G   D  T+   I  LC  G I +A ++F  ++    + D   Y
Sbjct: 369 KRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 428

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +L+D    +G  +  +E++ ++       NVV Y+ +I  LC  G++ +A ++F +M++
Sbjct: 429 ITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 488

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
             +VP   +++ LI GF++ +     +EL   M      P+     + ++   K+  S+ 
Sbjct: 489 KGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIK 548

Query: 468 SLPSFTVHEQQ 478
           ++  + + + +
Sbjct: 549 AIQRYELMKSK 559



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/320 (20%), Positives = 133/320 (41%), Gaps = 35/320 (10%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           V     + N +++ +  +G++ + + + D+M +  V+ +  T+  +  G  + G +  A 
Sbjct: 211 VAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAP 270

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
                M+  G     ++Y+ L+    K+     AL +Y  M+  G+ P V  ++ L V  
Sbjct: 271 VALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAF 330

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +   VE    L  EM+ +GV  + ++Y   I  L +     EA  +   +    C+   
Sbjct: 331 GKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK--- 387

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
                                           P+V+T++++I  LC+ G++  A+D+F  
Sbjct: 388 --------------------------------PDVITHTVLIQVLCDAGRISDAKDVFWK 415

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M+++   P+ +T+  L+  F    +   V+E+ + MK      +    + V+D L +   
Sbjct: 416 MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 475

Query: 465 SLNSLPSFTVHEQQEEVDES 484
              +L  F   +Q+  V E 
Sbjct: 476 VFEALEMFDEMKQKGIVPEQ 495



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 6/117 (5%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G+++ G     ++L+    PD +T+  LI GL    R+ EA +LF +++  G  P+++TY
Sbjct: 1069 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1128

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
             +L+  L +      A  ++EE+           +PN  TY  +I G    G  D A
Sbjct: 1129 NSLILHLGKAGKAAEAGKMYEELLTKG------WKPNVFTYNALIRGYSVSGSTDSA 1179


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 227/440 (51%), Gaps = 6/440 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V     +   ++   F    ++ T L+  LC   ++  A  LF ++   G  PD+ T
Sbjct: 399 IGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLIT 458

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+TL++GLC+      A+ L+E+M +          PN++ +  I+ GLC++G + +A+ 
Sbjct: 459 YSTLIHGLCKQGEVQQAILLYEKMCSNR------IIPNSLIHGAILMGLCEKGKISQARM 512

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               +   N+  +++ Y  +I G+    +  EA +L+ ++ ++G+ P +VTFN +M   C
Sbjct: 513 YFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFC 572

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            N K+ +A RLLD +  HG+ P+A TY TL++ +C  G +    EL   M++     T  
Sbjct: 573 INRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHI 632

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I G CK  +++ +  L  +M + G+ PD V +NT+     +   + +AF+L+D+M
Sbjct: 633 TYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKM 692

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
             + +   + TY   I+G C  G + +A  L  +L+  K   +  AY ++I   C  G +
Sbjct: 693 LLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDV 752

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A+  FR +       ++  YS +IG LC    + +A+  F  M  + V P+   F++L
Sbjct: 753 DKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVL 812

Query: 421 IRGFIRINEPSKVIELLHKM 440
           +  F +    +   ELL +M
Sbjct: 813 LNAFHQCGHLNSEFELLAEM 832



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 221/439 (50%), Gaps = 6/439 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P  V+F +++   C    +  A + F  +   G  PD ++Y  L++GLC       AL
Sbjct: 277 FQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEAL 336

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +L  +M N         EP+ VTY  +  G    G ++ A  ++ +M  K   PN+VTYT
Sbjct: 337 DLKNDMENHG------LEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYT 390

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G C   +  EA +L+ EM+  G Q ++++  V++  LCK+ ++D A +L   M  +
Sbjct: 391 VLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEAN 450

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+RPD  TY+TL+ G C  G V  A  L+  M S         +  ++ G C+  +I  A
Sbjct: 451 GLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQA 510

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
              +  +++  +  D++++N +  G  +      A KL+ ++   G++    T+ + + G
Sbjct: 511 RMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYG 570

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C N  + +A  L  T+++   E +   Y +L++  C+ G ++  LEL   +    + P 
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPT 630

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            +TY+++I GLC   ++ ++  L  DM+   + P+ ++++ +I+ F +  +  K  +L  
Sbjct: 631 HITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYD 690

Query: 439 KMKEINVMPDASIVSIVVD 457
           KM   N+ P +   +I+++
Sbjct: 691 KMLLHNLEPTSVTYNILIN 709



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 230/438 (52%), Gaps = 9/438 (2%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           T+ SL+  L   S IM    ++ +++V G     +T + +V+GLCR S    A+  F++ 
Sbjct: 216 TYNSLLYNL-RHSNIM--WDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDT 272

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                EF    +P+ V++ TI+   CK GFVD AK     M    + P+  +Y  +I G 
Sbjct: 273 EGK--EF----QPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGL 326

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C A    EA  L  +M + G++P++VT+N++       G ++ A  ++  M+  G  P+ 
Sbjct: 327 CIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNL 386

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
            TY  L+ G C  G V  A +L+  M S G + ++ S ++L+   CK+++++ A  L+ E
Sbjct: 387 VTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCE 446

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M + G++PD++ ++TL  GL +  +V++A  L+++M  N +  ++  +   + GLC+ G 
Sbjct: 447 MEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGK 506

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           I +A   F  L       DI  YN +IDG  K G    A++L++ L    + P +VT++ 
Sbjct: 507 ISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNS 566

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           ++ G C + ++ +AR L   ++ + + PN +T+  L+  +        ++ELL +MK   
Sbjct: 567 LMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKA 626

Query: 445 VMPDASIVSIVVDLLAKN 462
           + P     ++V+  L K 
Sbjct: 627 IGPTHITYTVVIKGLCKQ 644



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 203/422 (48%), Gaps = 6/422 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VT+  L KG      I  A  +  K+ + G  P++ TYT L+ G C+  +   AL L
Sbjct: 349 PDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKL 408

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           ++EM +   +  ++      + T ++  LCK   VD A +L  +M+   ++P+++TY+++
Sbjct: 409 YKEMISHGFQLSII------SSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTL 462

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C   +  +A  L+ +M    + PN +    I+  LC+ GK+ +A    D +I   +
Sbjct: 463 IHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNL 522

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D   YN ++DG+   G    A +L+  +   G   T+ +++ L+ G+C N+++  A  
Sbjct: 523 SLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARR 582

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L   +   G++P+ V + TL     E   ++   +L  EM+   +     TY   I GLC
Sbjct: 583 LLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLC 642

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K   + E+ +L   +  +    D  +YN++I   CK+  +  A +L+  +    L P  V
Sbjct: 643 KQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSV 702

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+I+I G C  G +  A +L + ++   V  N   +  +I+      +  K +    +M
Sbjct: 703 TYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQM 762

Query: 441 KE 442
            E
Sbjct: 763 VE 764



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 192/406 (47%), Gaps = 42/406 (10%)

Query: 84  MANGNGEFGVVCE----------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
           +  G+G    +CE           + V +  +     +   V  A  +L++MKD N   +
Sbjct: 154 LHEGSGSAPSLCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVS 213

Query: 134 VVTYTS--------------------------------VIRGFCYAKDWNEAKRLFIEMM 161
           + TY S                                V+ G C    + +A   F +  
Sbjct: 214 IQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTE 273

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
            +  QP+VV+FN IM   CK G +D A     +M++HG+ PDA++YN L+ G C+ G + 
Sbjct: 274 GKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMG 333

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A +L   ME+ G +  + +Y+IL  G+     I GA ++  +ML KG  P++V +  L 
Sbjct: 334 EALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLI 393

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G  +I  VE A KL+ EM  +G      +    +  LCK+  +  A +LF  +      
Sbjct: 394 CGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLR 453

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D+  Y++LI GLCK G ++ A+ L+  +    ++PN + +  ++ GLC  G++ +AR  
Sbjct: 454 PDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMY 513

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           F  +  + +  ++I ++++I G+I+     + ++L  ++ E  + P
Sbjct: 514 FDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISP 559



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 146/294 (49%), Gaps = 13/294 (4%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P  VTF SL+ G C   ++ +A  L   +++ G EP+  TYTTL+N  C   +    L 
Sbjct: 558 SPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLE 617

Query: 80  LFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           L  EM A   G       P  +TYT +I GLCK+  + ++ +LL  M    + P+ V+Y 
Sbjct: 618 LLSEMKAKAIG-------PTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYN 670

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I+ FC A+D  +A +L+ +M+   ++P  VT+N++++  C  G + +A  LL  +   
Sbjct: 671 TIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNR 730

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            V  + + Y T++   C  G V+ A   F  M   G + ++  YS +I   CK   +  A
Sbjct: 731 KVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEA 790

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
              +  MLS G+ PD  +   L     +   +   F+L  EM ++G     W Y
Sbjct: 791 KYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG-----WLY 839


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 221/423 (52%), Gaps = 6/423 (1%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
            F ++     E  V++ T +++GLC+     +   L +E+A      GV  + N VTY  
Sbjct: 216 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK----GV--KANVVTYNA 269

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
            I+G  K   +    E+L  M+ + +  NVVTYT +I GF       EA+RLF EM ++G
Sbjct: 270 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 329

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           ++ +V  +  I+   C++G +  A  L D M   G+ P A TY  L+ G C  G++  A+
Sbjct: 330 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 389

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            L   M+  G       ++ LI+GYC++  ++ AL L   M  KG++ DV  +N++  GL
Sbjct: 390 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 449

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            ++++ + A  L   M   GV+ +T ++ T ID  CK G  VEA  +F  +       +I
Sbjct: 450 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 509

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN LIDG  K G ++ A +L   L    L+P+V T + +I G C DG++D A  LF +
Sbjct: 510 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 569

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           M +  +VPNV+T+  +I G  +     +  +L  +MKE  + PD ++ S +V  L   + 
Sbjct: 570 MPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADE 629

Query: 465 SLN 467
           S++
Sbjct: 630 SIS 632



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 206/397 (51%), Gaps = 6/397 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           + T ++ GLC    +     L  ++   G + +V TY   + G  +     + L    E+
Sbjct: 231 SLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR----LDLGGVAEI 286

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
                + GV C  N VTYT +I G    G +++A+ L  +M++K I+ +V  YTS+I   
Sbjct: 287 LTLMEKEGVAC--NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 344

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C + +   A  LF EM D+G+ P+  T+  ++  +CK G+M+ A  L++ M   G+  + 
Sbjct: 345 CRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 404

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             +NTL+DG+C +G V+ A  L V ME  G +  VF+Y+ + +G CK    + A  L   
Sbjct: 405 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFS 464

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+ +G+ P+ +   TL     +      A ++F EM+  G   +  TY   IDG  K G 
Sbjct: 465 MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGN 524

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + EA +L   L       D+    SLI G C  G++++AL+LF  +P   LVPNVVTY+ 
Sbjct: 525 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 584

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           MI GL  DG+ ++A  L+ +M+E  + P+   +  L+
Sbjct: 585 MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/333 (34%), Positives = 186/333 (55%), Gaps = 6/333 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           + VT+T LI G     +I EA  LF ++R  G E DV+ YT++++  CR+ +   AL LF
Sbjct: 298 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 357

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           +EM +     G++  P+  TY  +I G+CK G ++ A+ L+ +M+ K I  N V + ++I
Sbjct: 358 DEMTDK----GLI--PSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 411

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C +   +EA RL + M  +G++ +V  +N I   LCK  + DEA  LL  M++ GV 
Sbjct: 412 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 471

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  ++ TL+D +C  G    AK +F  ME  G    + +Y++LI+GY K   ++ A  L
Sbjct: 472 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL 531

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             E+ ++G+ PDV    +L  G     +V+ A KLFDEM + G+  +  TY   I GL K
Sbjct: 532 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 591

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +G   EA +L+  ++      D   Y+SL+  L
Sbjct: 592 DGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 191/388 (49%), Gaps = 6/388 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G  ++  +       + VT+ + I+G      +   A + T +   G   +V TY
Sbjct: 243 GDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTY 302

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L++G         A  LFEEM     E G+  E +   YT+II   C+ G V +A  L
Sbjct: 303 TLLIHGFSNIGKIEEAQRLFEEMR----EKGI--EADVYVYTSIISCNCRSGNVKRALVL 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M DK + P+  TY ++I G C A     A+ L  EM  +G+  N V FN ++D  C+
Sbjct: 357 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 416

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G +DEA RL  +M + G+  D F YN++  G C   R + AK L  SM   G      S
Sbjct: 417 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMS 476

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+ YCK      A  ++ EM  KG  P+++ +N L  G  +   ++ A KL DE++
Sbjct: 477 FTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELE 536

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D +T  + I G C +G +  A++LF  +       ++  Y ++I GL K GR E
Sbjct: 537 NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSE 596

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGL 389
            A +L+  +    L P+   YS ++G L
Sbjct: 597 EAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 180/341 (52%)

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            L + G VD       +M + +++  V + T V+ G C   D    ++L  E+  +GV+ 
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           NVVT+N  ++   K   +   + +L LM + GV  +  TY  L+ GF   G++  A+ LF
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G +  V+ Y+ +I+  C++  ++ AL L+ EM  KG+ P    +  L  G+ + 
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            Q+E A  L +EMQ  G+  +   + T IDG C++G + EA+ L   +     E D+ AY
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
           NS+  GLCK  R + A  L  S+    + PN ++++ +I   C +G   +A+ +F +MEE
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 502

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
              VPN+IT+++LI G+ +     +  +L  +++   ++PD
Sbjct: 503 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPD 543



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 12/178 (6%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+ ++FT+LI   C E   +EA  +F ++   G  P++ TY  L++G  +  +   A  
Sbjct: 471 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 530

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L +E+ N     G++  P+  T T++I G C +G VD A +L  +M  + + PNVVTYT+
Sbjct: 531 LKDELENR----GLI--PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 584

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           +I G        EA +L+ EM + G+ P+   ++ ++      G +  A   + + IQ
Sbjct: 585 MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV------GSLHSADESISMQIQ 636



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T TSLI G C + ++  A  LF ++   G  P+V TYT +++GL +   +  A  L
Sbjct: 542 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 601

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE-LLLQMKDKNIKPNVV 135
           ++EM     E G+   P+   Y++++      G +  A E + +Q++   +K N V
Sbjct: 602 YDEMK----ETGLT--PDDTVYSSLV------GSLHSADESISMQIQGSQVKANKV 645



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +   + +    P+ VT+T++I GL  + R  EA  L+ +++  G  PD   Y
Sbjct: 558 GKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVY 617

Query: 62  TTLVNGLCRTSHTI 75
           ++LV  L     +I
Sbjct: 618 SSLVGSLHSADESI 631


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/317 (35%), Positives = 177/317 (55%), Gaps = 11/317 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P AVT+ SLI GLC   R  EA  L  ++   GC PD+FTYTTL+ G C++  +  AL +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 81  FEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM-KDKNIKPNVVTYT 138
           FE++ A G         P+ VTY+ +IDGLCKEG + +A +L  +M K  +  PN VTY 
Sbjct: 112 FEQLVARGF-------RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           S+I GFC     +EA  L   M + G  P+VVT+  +M+  CK  ++D+A  LL+ M + 
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P+  T+ +L+DG C   R++ A  +   M    C  TV++Y+ +++GYC+  ++E A
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
                E +     P+VV  N +  GL ++++   A +L +E +R     D   Y T ID 
Sbjct: 285 RKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342

Query: 319 LCKNGYIVEAVELFHTL 335
           LC+   + EA  ++  +
Sbjct: 343 LCREKKVDEACRVYRKM 359



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 184/323 (56%), Gaps = 4/323 (1%)

Query: 97  PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           P  VTY ++I GLCK     +A +LL +M      P++ TYT++I GFC +K  ++A R+
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG-VRPDAFTYNTLLDGFC 215
           F +++ +G +P+VVT++ ++D LCK G++ EA  L   MI+ G   P+  TYN+L+ GFC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G+++ A  L   M   G    V +Y+ L+NG+CK   ++ A  L ++M  KG+ P+VV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
              +L  GL   +++  A  +  EM+R   +   +TY T +DG C+   + EA +    L
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--L 289

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
             + C  ++ ++N +I GLCK  R   A+EL          P+VV Y+ +I  LC + ++
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 396 DKARDLFLDM-EENAVVPNVITF 417
           D+A  ++  M EE   +PN IT+
Sbjct: 350 DEACRVYRKMLEEPGCLPNSITY 372



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 172/314 (54%), Gaps = 8/314 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R S  + +L  ++ S   PD  T+T+LI G C   +  +A  +F +L   G  PDV TY+
Sbjct: 69  RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 128

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++GLC+      A++LF  M          C PNTVTY ++I G C+ G +D+A  LL
Sbjct: 129 CLIDGLCKEGRLKEAIDLFGRMIKSGS-----CMPNTVTYNSLISGFCRMGKMDEAMNLL 183

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +    P+VVTYT+++ GFC     ++A  L  +M  +G+ PNVVTF  +MD LC+ 
Sbjct: 184 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRE 243

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++ +A  +L  M +    P  +TYNT+LDG+C   ++  A++    +E M C   V S+
Sbjct: 244 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSF 301

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-Q 301
           +I+I G CK      A+ L  E   +   PDVV++ T+   L    +V+ A +++ +M +
Sbjct: 302 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLE 361

Query: 302 RNGVAADTWTYRTF 315
             G   ++ TY TF
Sbjct: 362 EPGCLPNSITYSTF 375



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 179/328 (54%), Gaps = 6/328 (1%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           ++D    P  VTY S+I G C A+  +EA  L  EM+  G  P++ T+  ++   CK+ K
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYS 243
            D+A R+ + ++  G RPD  TY+ L+DG C  GR+  A +LF  M +S  C     +Y+
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G+C+  +++ A++L   M   G  PDVV + TL  G  ++ +++ A+ L ++M R 
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+  +  T+ + +DGLC+   + +AV +   +R   C   +  YN+++DG C+  +LE A
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284

Query: 364 LE-LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
            + +   + C    PNVV+++IMI GLC   +  +A +L  +       P+V+ +  +I 
Sbjct: 285 RKFMLEEMDCP---PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 341

Query: 423 GFIRINEPSKVIELLHKM-KEINVMPDA 449
              R  +  +   +  KM +E   +P++
Sbjct: 342 VLCREKKVDEACRVYRKMLEEPGCLPNS 369



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 167/317 (52%), Gaps = 3/317 (0%)

Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           + W   +     + D    P  VT+N ++  LCK  +  EA  LL+ M+  G  PD FTY
Sbjct: 33  QRWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTY 92

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
            TL+ GFC + + + A  +F  + + G +  V +YS LI+G CK   ++ A+ L+  M+ 
Sbjct: 93  TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 152

Query: 268 KG-IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            G   P+ V +N+L  G   + +++ A  L + M   G + D  TY T ++G CK   + 
Sbjct: 153 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 212

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A +L + +       ++  + SL+DGLC+  RL  A+ +   +      P V TY+ ++
Sbjct: 213 DAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 272

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G C   Q+++AR   L  EE    PNV++F+++IRG  ++N  S+ +EL+ + +     
Sbjct: 273 DGYCRVNQLEEARKFML--EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCN 330

Query: 447 PDASIVSIVVDLLAKNE 463
           PD  + + V+D+L + +
Sbjct: 331 PDVVMYTTVIDVLCREK 347



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 120/211 (56%), Gaps = 9/211 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG++     +L R+ ++  +PD VT+T+L+ G C  +R+ +A  L  ++   G  P+V T
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVT 232

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +T+L++GLCR +    A+++  EM   +      C P   TY TI+DG C+   +++A++
Sbjct: 233 FTSLMDGLCRENRLSDAVHILGEMRRKS------CSPTVYTYNTILDGYCRVNQLEEARK 286

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            +L+  D    PNVV++  +IRG C     +EA  L  E   +   P+VV +  ++D LC
Sbjct: 287 FMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLC 344

Query: 181 KNGKMDEASRLLDLMIQH-GVRPDAFTYNTL 210
           +  K+DEA R+   M++  G  P++ TY+T 
Sbjct: 345 REKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 2/196 (1%)

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           P  V +N+L  GL +  +   A+ L +EM  +G   D +TY T I G CK+    +A+ +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLC 390
           F  L       D+  Y+ LIDGLCK GRL+ A++LF R +  G  +PN VTY+ +I G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD-A 449
             G+MD+A +L   M E    P+V+T+  L+ GF ++       +LL++M    + P+  
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 450 SIVSIVVDLLAKNEIS 465
           +  S++  L  +N +S
Sbjct: 232 TFTSLMDGLCRENRLS 247


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 234/465 (50%), Gaps = 8/465 (1%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           + G VV  R+        AV +  L+ GLC   R+ EA  +   +   G   D  TY TL
Sbjct: 217 ARGLVV--RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V G CR     +AL +  +M       G V  P+    + +ID L K+  V++A  L  +
Sbjct: 275 VYGFCRMEELEMALRITHDMI----RLGFV--PSEANCSFMIDELRKKELVEEAFSLACK 328

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           + D  + PNV  Y ++I   C  + +++A RLF EM  +G++PN VT+ +++  LCK G 
Sbjct: 329 LGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +++A  L D M   G++   + YN+L++G+C  G ++ A+ L   M   G   T  SYS 
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI G C+N ++  A+ L+ EM  +GI  +      L  G  +  +++ A +LFD+M  + 
Sbjct: 449 LIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           V  +  T+   I+G C  G I +A +L+  +  +  + D   Y SLI GLC +  +  A 
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 568

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E    L     V N  + + ++ GL  +G+  +   L+ +M    V  ++++F +++   
Sbjct: 569 EFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 628

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
           ++ ++  K   L  +MKE  V PD    + ++D L+K E  + +L
Sbjct: 629 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 234/529 (44%), Gaps = 83/529 (15%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++H  + LG      F P     + +I  L  +  + EA +L  KL   G  P+VF Y 
Sbjct: 289 RITHDMIRLG------FVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++ LC+      A  LF+EMA G G      EPN VTY  +I  LCK G ++ A  L 
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+DK IK  V  Y S+I G+C     + A+ L   M+ +G+ P   +++ ++  LC+N
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G +  A  L   M + G+  + +T+  L++GFC   +++ A  LF  M          ++
Sbjct: 457 GDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPD----------------------------- 273
           +++I GYC    I  A  LY +M+  G+KPD                             
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 274 --VVIHN----TLFVGLFEIHQVERAFKLFDEM--------------------------- 300
              V++N     L  GLF   +    + L+DEM                           
Sbjct: 577 SYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636

Query: 301 --------QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
                   +  GV  D   Y   ID L K   +++A+  +  + I     +   +  LI+
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLIN 696

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            LCKSG L  A  L + +  G ++PN  TY+  +     +G M+KA+DL   M +  +  
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA- 755

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++++F++LI+G  +  +  + I+L+ K+ E    PD    S ++  L K
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCK 804



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 184/360 (51%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  T + I+  L K      A++L  +M    +  +   YT+ IR +C +++ + A+ L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
           + M  +GV+ + V +NV+M  LCKN ++ EA  + ++M+  GV  D  TY TL+ GFC  
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
             +  A  +   M  +G   +  + S +I+   K + +E A SL  ++   G+ P+V  +
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
           N L   L +  + + A +LF EM   G+  +  TY   I  LCK G I +A+ LF  +R 
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
              +  +  YNSLI+G CK G L+ A  L   +    L P   +YS +I GLC +G +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A +L  +M E  +  N  TF  LI GF +  +  +   L  KM + NV+P+    +++++
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 232/499 (46%), Gaps = 50/499 (10%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           +++ S   P+ VTF  +I+G C    I +A  L+ ++   G +PD +TY +L++GLC TS
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 73  -------------HTIVALNLFEEMANGNGEF--GVVCEP--------------NTVTYT 103
                        ++   LN F   A   G F  G   E               + V++T
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFT 622

Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
            I+    K+   +K+  L  +MK++ +KP+ + YT +I      ++  +A   + +M+  
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVID 682

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G  PN VT  V+++ LCK+G +  A  L   M+   V P+ FTYN  LD F   G +  A
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           K+L  +M   G   ++ S++ILI G CK  +I+ A+ L  ++   G  PD + ++T+   
Sbjct: 743 KDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHE 801

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L ++  + +AF+L++EM   G+  D   Y  FI     +G   +A+ ++  +     + +
Sbjct: 802 LCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA--RDL 401
              Y +L+ G+  S  L      FR     +    +  Y +M      D   +K+  R  
Sbjct: 862 WDTYRALLSGI--SLMLHYDFSCFRGTKQYI---QISVYELM------DSTHNKSHRRIW 910

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F+D  ++  +  ++ FD  +  +  I+  S V     K+K+++  P  S  +     +  
Sbjct: 911 FVDDHKSGEI--ILEFDGRLNKWGVISFRSDV-----KVKKLSPGPQVSFPTHQSGYMPT 963

Query: 462 NEISLNSLPSFTVHEQQEE 480
           +   L  +P   +HE+ +E
Sbjct: 964 SPSLLLPVPWIMIHERGKE 982



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 107/261 (40%), Gaps = 39/261 (14%)

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
           S G     ++ S ++    K ++   A  L+ +ML  G+  D  ++        E   ++
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A  L   M+  GV A    Y   + GLCKN  + EAVE+ + +  +    D   Y +L+
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 352 DGLCKSGRLEIALELFR-------------------------------SLPCGV----LV 376
            G C+   LE+AL +                                 SL C +    +V
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           PNV  Y+ +I  LC + + D A  LF +M    + PN +T+ +LI    +       + L
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 437 LHKMKE----INVMPDASIVS 453
             KM++    + V P  S+++
Sbjct: 396 FDKMRDKGIKVTVYPYNSLIN 416


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 222/492 (45%), Gaps = 42/492 (8%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GR      ++  ++      D  T+   I  LC   R  +A  L  K+R     P+  TY
Sbjct: 1033 GRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTY 1092

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             TL+NG  +     VA  +F EM+  +        PN VTY  +I G C  G  ++A  L
Sbjct: 1093 NTLINGFVKEGKIGVAAQVFNEMSKFD------LSPNCVTYNALIGGHCHVGDFEEALRL 1146

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L  M+   ++ N VTY +++ G C  + +  AKRL   M    +    + + V++D LCK
Sbjct: 1147 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCK 1206

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            NG +DEA +L+  M + GV PD  TY++L++GFC  G +  AKE+   M   G       
Sbjct: 1207 NGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKII 1266

Query: 242  YSILINGYCKNKEIEGALSLYSEM----------------------------------LS 267
            YS LI  +C++  +  A+ +Y+ M                                  +S
Sbjct: 1267 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 1326

Query: 268  K-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            + G+ P+ + ++ +  G   I     AF  FD+M + G     +TY + + GLCK G +V
Sbjct: 1327 RIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLV 1386

Query: 327  EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            EA +  + L  +    D   YN+L+   CKSG L  A+ LF  +    ++P+  TYS ++
Sbjct: 1387 EAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLL 1446

Query: 387  GGLCNDGQMDKARDLF-LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
             GLC  G+   A  LF   M    + PN + +  L+ G  +   P        +M +   
Sbjct: 1447 TGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGT 1506

Query: 446  MPDASIVSIVVD 457
             PD    + ++D
Sbjct: 1507 CPDTVAFNAIID 1518



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 223/499 (44%), Gaps = 42/499 (8%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G++     V   + K   +P+ VT+ +LI G C      EA  L   +   G   +  TY
Sbjct: 1103 GKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTY 1162

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             TL+NGLC+     +A  L E M   +   G       + YT +IDGLCK G +D+A +L
Sbjct: 1163 GTLLNGLCKHEKFELAKRLLERMRVNDMVVG------HIAYTVLIDGLCKNGMLDEAVQL 1216

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            +  M    + P+V+TY+S+I GFC   +   AK +   M   G+  N + ++ ++   C+
Sbjct: 1217 VGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQ 1276

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            +G + EA ++  +M  +G   D FT N L+   C  G++  A++    M  +G      +
Sbjct: 1277 HGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 1336

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKP----------------------------- 272
            Y  +INGY    +   A S + +M+  G  P                             
Sbjct: 1337 YDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLH 1396

Query: 273  ------DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
                  D V++NTL     +   +  A  LFD+M +N V  D++TY + + GLC+ G  V
Sbjct: 1397 YIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAV 1456

Query: 327  EAVELFHTLRILKCEFDIRA-YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             AV LF T       F     Y  L+DGL K+G  + A   F  +      P+ V ++ +
Sbjct: 1457 TAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAI 1516

Query: 386  IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
            I      GQM KA D F  M    V PN+ T+++L+ GF +     + + L   M    +
Sbjct: 1517 IDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGI 1576

Query: 446  MPDASIVSIVVDLLAKNEI 464
             PD      ++  L+K+ I
Sbjct: 1577 FPDKLTFHSLILGLSKSGI 1595



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 215/457 (47%), Gaps = 41/457 (8%)

Query: 26   FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
            F  LI+    E  I  A   F  + + G +P V+T   ++  + +   T +  +LF EM+
Sbjct: 917  FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976

Query: 86   NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
            +       +C PN  T+  +I+GLC EG + KA  LL QM++    P +VTY +++  +C
Sbjct: 977  DKG-----IC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 1030

Query: 146  YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                +  A  L   M+ +G++ +V T+NV +D LC N +  +A  LL  M +  + P+  
Sbjct: 1031 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 1090

Query: 206  TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            TYNTL++GF   G++  A ++F  M          +Y+ LI G+C   + E AL L   M
Sbjct: 1091 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 1150

Query: 266  LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             + G++ + V + TL  GL +  + E A +L + M+ N +      Y   IDGLCKNG +
Sbjct: 1151 EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGML 1210

Query: 326  VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS-- 383
             EAV+L   +       D+  Y+SLI+G C+ G ++ A E+   +    LV N + YS  
Sbjct: 1211 DEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTL 1270

Query: 384  ---------------------------------IMIGGLCNDGQMDKARDLFLDMEENAV 410
                                             +++  LC DG++ +A      M    +
Sbjct: 1271 IYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGL 1330

Query: 411  VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            VPN IT+D +I G+  I +P         M +    P
Sbjct: 1331 VPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHP 1367



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 197/410 (48%), Gaps = 17/410 (4%)

Query: 64   LVNGLCRTSHTIVALNLFE----------EMANGNGE-FGVV------CEPNTVTYTTII 106
            L +  C T+H +V   +++          +M  G+   FG +      C      +  +I
Sbjct: 862  LTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLI 921

Query: 107  DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
                KEG +D A E    +     KP+V T   ++      K       LF EM D+G+ 
Sbjct: 922  RVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGIC 981

Query: 167  PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
            PNV TFN++++ LC  G + +A  LL  M ++G  P   TYNTLL+ +C  GR   A EL
Sbjct: 982  PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIEL 1041

Query: 227  FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
               M   G +  V +Y++ I+  C N     A  L  +M  + I P+ V +NTL  G  +
Sbjct: 1042 IDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVK 1101

Query: 287  IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              ++  A ++F+EM +  ++ +  TY   I G C  G   EA+ L   +       +   
Sbjct: 1102 EGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVT 1161

Query: 347  YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
            Y +L++GLCK  + E+A  L   +    +V   + Y+++I GLC +G +D+A  L  +M 
Sbjct: 1162 YGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMY 1221

Query: 407  ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            ++ V P+VIT+  LI GF R+       E++ +M    ++ +  I S ++
Sbjct: 1222 KDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLI 1271



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 211/439 (48%), Gaps = 5/439 (1%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            D+V + +L+   C    + EA ALF K+      PD +TY++L+ GLCR    + A+ LF
Sbjct: 1403 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 1462

Query: 82   EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
               A G G       PN V YT ++DGL K G    A     +M  K   P+ V + ++I
Sbjct: 1463 GT-AMGRGTLF----PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 1517

Query: 142  RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
                      +A   F  M   GV PN+ T+N+++    K   +     L   M++ G+ 
Sbjct: 1518 DSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF 1577

Query: 202  PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            PD  T+++L+ G   +G  +   +L   M   G     F+++ILIN Y ++ ++  A  L
Sbjct: 1578 PDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDL 1637

Query: 262  YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             + M + G+ PD   +N +F GL +      +  +  EM  NGV      Y T I+G+C+
Sbjct: 1638 VNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCR 1697

Query: 322  NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
             G I  A +L   +  L       A ++++ GL   G+ E A+ +   +    L+P + T
Sbjct: 1698 VGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIAT 1757

Query: 382  YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
            ++ ++   C D ++ +A  L   ME   +  +V+ +++LI G     + +   EL  +M+
Sbjct: 1758 FTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR 1817

Query: 442  EINVMPDASIVSIVVDLLA 460
              ++ P+ +  +++VD ++
Sbjct: 1818 HRDLCPNITTYAVLVDAIS 1836



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 213/442 (48%), Gaps = 7/442 (1%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPDVFT 60
            G +     +  +++++   PD+ T++SL+ GLC + + + A  LF T +      P+   
Sbjct: 1418 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 1477

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            YT LV+GL +  H   A   FEEM          C P+TV +  IID   + G + KA +
Sbjct: 1478 YTCLVDGLSKAGHPKAAFYFFEEMMKKG-----TC-PDTVAFNAIIDSCSRRGQMMKAND 1531

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
                M+   + PN+ TY  ++ GF   +       L+  MM +G+ P+ +TF+ ++  L 
Sbjct: 1532 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 1591

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            K+G  D   +LL  MI  G   D FT+N L++ +  +G++  A +L   M ++G      
Sbjct: 1592 KSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRD 1651

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +Y+ + NG  K      +  +  EML  G+ P    + TL  G+  +  ++ AFKL DEM
Sbjct: 1652 TYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 1711

Query: 301  QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +  G  +        + GL   G   +A+ +   +  ++    I  + +L+   C+  ++
Sbjct: 1712 EALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKI 1771

Query: 361  EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
              AL+L   +    L  +VV Y+++I G+C +G    A +L+ +M    + PN+ T+ +L
Sbjct: 1772 AEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVL 1831

Query: 421  IRGFIRINEPSKVIELLHKMKE 442
            +      N   +  +LL  ++E
Sbjct: 1832 VDAISAANNLIQGEKLLTDLQE 1853



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 201/431 (46%), Gaps = 9/431 (2%)

Query: 19   FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
              P+++T+  +I G  +    + A + F  +   G  P  FTY +L+ GLC+  + + A 
Sbjct: 1330 LVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 1389

Query: 79   NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
                 +    G        ++V Y T++   CK G + +A  L  +M   N+ P+  TY+
Sbjct: 1390 KFLNRLHYIPGAV------DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 1443

Query: 139  SVIRGFCYAKDWNEAKRLFIEMMDQGVQ-PNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            S++ G C       A  LF   M +G   PN V +  ++D L K G    A    + M++
Sbjct: 1444 SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 1503

Query: 198  HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
             G  PD   +N ++D     G++  A + F +M   G    + +Y+IL++G+ K + +  
Sbjct: 1504 KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLR 1563

Query: 258  ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
             LSLYS M+ +GI PD +  ++L +GL +    +   KL  +M   G  AD +T+   I+
Sbjct: 1564 YLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILIN 1623

Query: 318  GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC-KSGRLEIALELFRSLPCGVLV 376
               ++G + +A +L + +  L    D   YN + +GL  KS   E  + L   L  GV +
Sbjct: 1624 KYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGV-I 1682

Query: 377  PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            P    Y  +I G+C  G +  A  L  +ME      + +    ++RG +   +    + +
Sbjct: 1683 PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLV 1742

Query: 437  LHKMKEINVMP 447
            L  M  + ++P
Sbjct: 1743 LDHMLRMRLLP 1753



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 145/294 (49%)

Query: 164  GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
            G +P+V T N+I+  + K+ + +    L   M   G+ P+  T+N L++G C+ G +  A
Sbjct: 944  GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003

Query: 224  KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
              L   ME  G   T+ +Y+ L+N YCK    + A+ L   M+ KGI+ DV  +N     
Sbjct: 1004 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDN 1063

Query: 284  LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
            L   H+  +A+ L  +M++  ++ +  TY T I+G  K G I  A ++F+ +       +
Sbjct: 1064 LCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN 1123

Query: 344  IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
               YN+LI G C  G  E AL L   +    L  N VTY  ++ GLC   + + A+ L  
Sbjct: 1124 CVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLE 1183

Query: 404  DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
             M  N +V   I + +LI G  +     + ++L+  M +  V PD    S +++
Sbjct: 1184 RMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLIN 1237



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 149/312 (47%), Gaps = 2/312 (0%)

Query: 153  AKRLFIEMMDQGVQPNVV--TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
            +K +F  +MD     N +   F++++    K G +D A    +L+   G +P  +T N +
Sbjct: 896  SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMI 955

Query: 211  LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
            L       R      LF  M   G    V +++ILING C    ++ A +L  +M   G 
Sbjct: 956  LASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGF 1015

Query: 271  KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
             P +V +NTL     +  + + A +L D M   G+ AD  TY  FID LC N    +A  
Sbjct: 1016 VPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYL 1075

Query: 331  LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
            L   +R      +   YN+LI+G  K G++ +A ++F  +    L PN VTY+ +IGG C
Sbjct: 1076 LLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHC 1135

Query: 391  NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            + G  ++A  L   ME   +  N +T+  L+ G  +  +      LL +M+  +++    
Sbjct: 1136 HVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI 1195

Query: 451  IVSIVVDLLAKN 462
              ++++D L KN
Sbjct: 1196 AYTVLIDGLCKN 1207



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 129/257 (50%)

Query: 207  YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
            ++ L+  +   G +++A E F  +  +G K +V++ ++++    K+K  E   SL+ EM 
Sbjct: 917  FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976

Query: 267  SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             KGI P+V   N L  GL     +++A  L  +M+ NG      TY T ++  CK G   
Sbjct: 977  DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036

Query: 327  EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
             A+EL   +     E D+  YN  ID LC + R   A  L + +   ++ PN VTY+ +I
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 1096

Query: 387  GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             G   +G++  A  +F +M +  + PN +T++ LI G   + +  + + LL  M+   + 
Sbjct: 1097 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 1156

Query: 447  PDASIVSIVVDLLAKNE 463
             +      +++ L K+E
Sbjct: 1157 LNEVTYGTLLNGLCKHE 1173



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 131/285 (45%), Gaps = 6/285 (2%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD +TF SLI GL           L  K+ + G   D FT+  L+N    +     A +L
Sbjct: 1578 PDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDL 1637

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
               M N  G F     P+  TY  I +GL K+    ++  +L +M +  + P    Y ++
Sbjct: 1638 VNFM-NTLGVF-----PDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITL 1691

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
            I G C   D   A +L  EM   G   + V  + ++  L   GK ++A  +LD M++  +
Sbjct: 1692 INGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRL 1751

Query: 201  RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             P   T+ TL+  FC   ++  A +L   ME  G K  V +Y++LI G C N +   A  
Sbjct: 1752 LPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFE 1811

Query: 261  LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
            LY EM  + + P++  +  L   +   + + +  KL  ++Q  G+
Sbjct: 1812 LYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1856



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 73/145 (50%)

Query: 321  KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
            K G I  AVE F  + ++  +  +   N ++  + K  R E+   LFR +    + PNV 
Sbjct: 926  KEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVG 985

Query: 381  TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            T++I+I GLC +G + KA +L   MEEN  VP ++T++ L+  + +       IEL+  M
Sbjct: 986  TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 1045

Query: 441  KEINVMPDASIVSIVVDLLAKNEIS 465
                +  D    ++ +D L  N  S
Sbjct: 1046 ICKGIEADVCTYNVFIDNLCTNHRS 1070


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 214/419 (51%), Gaps = 6/419 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     VL  +  S   PD  +++ LI   C +  +M+   L  ++     +P + +Y
Sbjct: 405 GEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSY 464

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++GLC+ +    A+++F  +   +      C+ ++  Y T+IDG C +G +D A +L
Sbjct: 465 TSLIHGLCKKNMLQNAVDIFHSIGASS------CKYDSTVYETLIDGFCMQGDMDSAIKL 518

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M    + P   +  S+IRG+     +++A  +F  M+  G+ P+ +  N I+D  C+
Sbjct: 519 LEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCR 578

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G   EA  LL+   +HG   +  +YN ++   C  G    A EL   M       +V +
Sbjct: 579 AGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVN 638

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI+G+ K    + A++L++ M+  GI  ++  +  L       H++  A+ +F EM+
Sbjct: 639 YSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMK 698

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  D  +Y T I G C N  + +A  LF  +    C  ++  Y  +IDG CKS R++
Sbjct: 699 ERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRID 758

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           +A  +F  +    ++P+VVTY+++I      G  D+A  L+  M++  V+P+ IT ++L
Sbjct: 759 LATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 215/454 (47%), Gaps = 6/454 (1%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           V+LG+I +S   P  VT+++ I GLC    +  A  L   L       +  ++  ++ G 
Sbjct: 342 VILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGF 401

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
           C+      AL + EEM +     G++  P+  +Y+ +I+  C +G V K  +L+ +M+  
Sbjct: 402 CKRGEVFEALQVLEEMKSS----GIL--PDVYSYSILINAFCGKGDVMKCLDLMEEMEHS 455

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
            IKP++V+YTS+I G C       A  +F  +     + +   +  ++D  C  G MD A
Sbjct: 456 QIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSA 515

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            +LL+ MI + + P AF+  +L+ G+   G  + A E+F +M   G      + + +++G
Sbjct: 516 IKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDG 575

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
            C+    + AL+L  +    G   +   +N +   L +    ERA +L   M +  V   
Sbjct: 576 SCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPS 635

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
              Y T I G  K      AV LF  +  +   F+I  Y  L+     S ++  A  +F+
Sbjct: 636 VVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFK 695

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L  + ++Y+ +I G CN+ +M KA  LF +M      PNVIT+  +I GF + N
Sbjct: 696 EMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSN 755

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
                  +  KM   +V+PD    ++++D   K+
Sbjct: 756 RIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKH 789



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 221/450 (49%), Gaps = 13/450 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR-----TSHTI 75
           PD  T   L+K L   +R+     +F +L+  G  P+++TYT ++N  C           
Sbjct: 280 PDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQ 339

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A+ L +   +G        +P  VTY+T I GLCK G V+ A  L+  +   N   N  
Sbjct: 340 AAVILGKIYRSGE-------KPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSH 392

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           ++  VI GFC   +  EA ++  EM   G+ P+V +++++++  C  G + +   L++ M
Sbjct: 393 SFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEM 452

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
               ++P   +Y +L+ G C    + +A ++F S+ +  CK+    Y  LI+G+C   ++
Sbjct: 453 EHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDM 512

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + A+ L  EM+   + P      +L  G +++   ++A ++F+ M R+G+  DT      
Sbjct: 513 DSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYI 572

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           +DG C+ GY  EA+ L    +      +  +YN++I  LCK G  E ALEL   +    +
Sbjct: 573 LDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNV 632

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
           +P+VV YS +I G        +A +LF  M +  +  N+ T+ +L+  F   ++  +   
Sbjct: 633 LPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYG 692

Query: 436 LLHKMKEINVMPDA-SIVSIVVDLLAKNEI 464
           +  +MKE  +  D  S  +++V      E+
Sbjct: 693 IFKEMKERGLCLDQISYTTLIVGFCNNREM 722



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 172/360 (47%), Gaps = 6/360 (1%)

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           E + V +  +I        ++ A ++    K   ++P++ T   +++    A      +R
Sbjct: 244 ERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRR 303

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCK----NGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +F E+ D+G  PN+ T+ ++M+  C     +  M +A+ +L  + + G +P   TY+T +
Sbjct: 304 VFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYI 363

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C  G V  A  L  ++          S++ +I G+CK  E+  AL +  EM S GI 
Sbjct: 364 HGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGIL 423

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PDV  ++ L         V +   L +EM+ + +     +Y + I GLCK   +  AV++
Sbjct: 424 PDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDI 483

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           FH++    C++D   Y +LIDG C  G ++ A++L   + C  LVP   +   +I G   
Sbjct: 484 FHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYK 543

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE--INVMPDA 449
            G  D+A ++F  M  + + P+ I  + ++ G  R     + + LL   +E   N+ P +
Sbjct: 544 LGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHS 603



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 6/280 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G       V   +L+    PD +    ++ G C      EA  L    +  G   +  +
Sbjct: 544 LGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHS 603

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  ++  LC+  +   AL L   M   N        P+ V Y+T+I G  K+    +A  
Sbjct: 604 YNAIIYKLCKEGYPERALELLPRMLKRN------VLPSVVNYSTLISGFAKQSNFKRAVN 657

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M    I  N+ TYT ++  F ++   +EA  +F EM ++G+  + +++  ++   C
Sbjct: 658 LFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFC 717

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            N +M +A  L + M + G  P+  TY  ++DGFC + R++ A  +F  M        V 
Sbjct: 718 NNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVV 777

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           +Y++LI+ Y K+   + A  LY  M  KG+ PD + HN L
Sbjct: 778 TYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 164/358 (45%), Gaps = 7/358 (1%)

Query: 106 IDGLCKEGFVDKAKELLLQMKD--KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           I G C E   D   EL     D  ++++ + V +  +I  F        A  +F      
Sbjct: 218 IVGFCNEAKYDTF-ELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHV 276

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC----LTGR 219
           G++P++ T N ++  L +  +++   R+ + +   G  P+ +TY  +++ +C        
Sbjct: 277 GLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAG 336

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           +  A  +   +   G K TV +YS  I+G CK   +E AL L   +       +    N 
Sbjct: 337 MRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFND 396

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  G  +  +V  A ++ +EM+ +G+  D ++Y   I+  C  G +++ ++L   +   +
Sbjct: 397 VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            +  I +Y SLI GLCK   L+ A+++F S+       +   Y  +I G C  G MD A 
Sbjct: 457 IKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAI 516

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            L  +M  N +VP   +   LIRG+ ++    + +E+ + M    + PD    + ++D
Sbjct: 517 KLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILD 574


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 222/492 (45%), Gaps = 42/492 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      ++  ++      D  T+   I  LC   R  +A  L  K+R     P+  TY
Sbjct: 282 GRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTY 341

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NG  +     VA  +F EM+  +        PN VTY  +I G C  G  ++A  L
Sbjct: 342 NTLINGFVKEGKIGVAAQVFNEMSKFD------LSPNCVTYNALIGGHCHVGDFEEALRL 395

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+   ++ N VTY +++ G C  + +  AKRL   M    +    + + V++D LCK
Sbjct: 396 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCK 455

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NG +DEA +L+  M + GV PD  TY++L++GFC  G +  AKE+   M   G       
Sbjct: 456 NGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKII 515

Query: 242 YSILINGYCKNKEIEGALSLYSEM----------------------------------LS 267
           YS LI  +C++  +  A+ +Y+ M                                  +S
Sbjct: 516 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 575

Query: 268 K-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           + G+ P+ + ++ +  G   I     AF  FD+M + G     +TY + + GLCK G +V
Sbjct: 576 RIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLV 635

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA +  + L  +    D   YN+L+   CKSG L  A+ LF  +    ++P+  TYS ++
Sbjct: 636 EAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLL 695

Query: 387 GGLCNDGQMDKARDLF-LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
            GLC  G+   A  LF   M    + PN + +  L+ G  +   P        +M +   
Sbjct: 696 TGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGT 755

Query: 446 MPDASIVSIVVD 457
            PD    + ++D
Sbjct: 756 CPDTVAFNAIID 767



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 223/499 (44%), Gaps = 42/499 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     V   + K   +P+ VT+ +LI G C      EA  L   +   G   +  TY
Sbjct: 352 GKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTY 411

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NGLC+     +A  L E M   +   G       + YT +IDGLCK G +D+A +L
Sbjct: 412 GTLLNGLCKHEKFELAKRLLERMRVNDMVVG------HIAYTVLIDGLCKNGMLDEAVQL 465

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M    + P+V+TY+S+I GFC   +   AK +   M   G+  N + ++ ++   C+
Sbjct: 466 VGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQ 525

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G + EA ++  +M  +G   D FT N L+   C  G++  A++    M  +G      +
Sbjct: 526 HGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 585

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKP----------------------------- 272
           Y  +INGY    +   A S + +M+  G  P                             
Sbjct: 586 YDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLH 645

Query: 273 ------DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
                 D V++NTL     +   +  A  LFD+M +N V  D++TY + + GLC+ G  V
Sbjct: 646 YIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAV 705

Query: 327 EAVELFHTLRILKCEFDIRA-YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            AV LF T       F     Y  L+DGL K+G  + A   F  +      P+ V ++ +
Sbjct: 706 TAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAI 765

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           I      GQM KA D F  M    V PN+ T+++L+ GF +     + + L   M    +
Sbjct: 766 IDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGI 825

Query: 446 MPDASIVSIVVDLLAKNEI 464
            PD      ++  L+K+ I
Sbjct: 826 FPDKLTFHSLILGLSKSGI 844



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 215/458 (46%), Gaps = 41/458 (8%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  LI+    E  I  A   F  + + G +P V+T   ++  + +   T +  +LF EM+
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
           +       +C PN  T+  +I+GLC EG + KA  LL QM++    P +VTY +++  +C
Sbjct: 226 DKG-----IC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 279

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
               +  A  L   M+ +G++ +V T+NV +D LC N +  +A  LL  M +  + P+  
Sbjct: 280 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 339

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYNTL++GF   G++  A ++F  M          +Y+ LI G+C   + E AL L   M
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            + G++ + V + TL  GL +  + E A +L + M+ N +      Y   IDGLCKNG +
Sbjct: 400 EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGML 459

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS-- 383
            EAV+L   +       D+  Y+SLI+G C+ G ++ A E+   +    LV N + YS  
Sbjct: 460 DEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTL 519

Query: 384 ---------------------------------IMIGGLCNDGQMDKARDLFLDMEENAV 410
                                            +++  LC DG++ +A      M    +
Sbjct: 520 IYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGL 579

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           VPN IT+D +I G+  I +P         M +    P 
Sbjct: 580 VPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPS 617



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 197/410 (48%), Gaps = 17/410 (4%)

Query: 64  LVNGLCRTSHTIVALNLFE----------EMANGNGE-FGVV------CEPNTVTYTTII 106
           L +  C T+H +V   +++          +M  G+   FG +      C      +  +I
Sbjct: 111 LTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLI 170

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
               KEG +D A E    +     KP+V T   ++      K       LF EM D+G+ 
Sbjct: 171 RVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGIC 230

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           PNV TFN++++ LC  G + +A  LL  M ++G  P   TYNTLL+ +C  GR   A EL
Sbjct: 231 PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIEL 290

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              M   G +  V +Y++ I+  C N     A  L  +M  + I P+ V +NTL  G  +
Sbjct: 291 IDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVK 350

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
             ++  A ++F+EM +  ++ +  TY   I G C  G   EA+ L   +       +   
Sbjct: 351 EGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVT 410

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           Y +L++GLCK  + E+A  L   +    +V   + Y+++I GLC +G +D+A  L  +M 
Sbjct: 411 YGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMY 470

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           ++ V P+VIT+  LI GF R+       E++ +M    ++ +  I S ++
Sbjct: 471 KDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLI 520



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 211/439 (48%), Gaps = 5/439 (1%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            D+V + +L+   C    + EA ALF K+      PD +TY++L+ GLCR    + A+ LF
Sbjct: 652  DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 711

Query: 82   EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
               A G G       PN V YT ++DGL K G    A     +M  K   P+ V + ++I
Sbjct: 712  GT-AMGRGTL----FPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 766

Query: 142  RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
                      +A   F  M   GV PN+ T+N+++    K   +     L   M++ G+ 
Sbjct: 767  DSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF 826

Query: 202  PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
            PD  T+++L+ G   +G  +   +L   M   G     F+++ILIN Y ++ ++  A  L
Sbjct: 827  PDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDL 886

Query: 262  YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
             + M + G+ PD   +N +F GL +      +  +  EM  NGV      Y T I+G+C+
Sbjct: 887  VNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCR 946

Query: 322  NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
             G I  A +L   +  L       A ++++ GL   G+ E A+ +   +    L+P + T
Sbjct: 947  VGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIAT 1006

Query: 382  YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
            ++ ++   C D ++ +A  L   ME   +  +V+ +++LI G     + +   EL  +M+
Sbjct: 1007 FTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR 1066

Query: 442  EINVMPDASIVSIVVDLLA 460
              ++ P+ +  +++VD ++
Sbjct: 1067 HRDLCPNITTYAVLVDAIS 1085



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 213/442 (48%), Gaps = 7/442 (1%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPDVFT 60
            G +     +  +++++   PD+ T++SL+ GLC + + + A  LF T +      P+   
Sbjct: 667  GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 726

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            YT LV+GL +  H   A   FEEM          C P+TV +  IID   + G + KA +
Sbjct: 727  YTCLVDGLSKAGHPKAAFYFFEEMMKKG-----TC-PDTVAFNAIIDSCSRRGQMMKAND 780

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
                M+   + PN+ TY  ++ GF   +       L+  MM +G+ P+ +TF+ ++  L 
Sbjct: 781  FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 840

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            K+G  D   +LL  MI  G   D FT+N L++ +  +G++  A +L   M ++G      
Sbjct: 841  KSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRD 900

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +Y+ + NG  K      +  +  EML  G+ P    + TL  G+  +  ++ AFKL DEM
Sbjct: 901  TYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 960

Query: 301  QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            +  G  +        + GL   G   +A+ +   +  ++    I  + +L+   C+  ++
Sbjct: 961  EALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKI 1020

Query: 361  EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
              AL+L   +    L  +VV Y+++I G+C +G    A +L+ +M    + PN+ T+ +L
Sbjct: 1021 AEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVL 1080

Query: 421  IRGFIRINEPSKVIELLHKMKE 442
            +      N   +  +LL  ++E
Sbjct: 1081 VDAISAANNLIQGEKLLTDLQE 1102



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 201/431 (46%), Gaps = 9/431 (2%)

Query: 19   FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
              P+++T+  +I G  +    + A + F  +   G  P  FTY +L+ GLC+  + + A 
Sbjct: 579  LVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 638

Query: 79   NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
                 +    G        ++V Y T++   CK G + +A  L  +M   N+ P+  TY+
Sbjct: 639  KFLNRLHYIPGAV------DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 692

Query: 139  SVIRGFCYAKDWNEAKRLFIEMMDQGVQ-PNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            S++ G C       A  LF   M +G   PN V +  ++D L K G    A    + M++
Sbjct: 693  SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 752

Query: 198  HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
             G  PD   +N ++D     G++  A + F +M   G    + +Y+IL++G+ K + +  
Sbjct: 753  KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLR 812

Query: 258  ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
             LSLYS M+ +GI PD +  ++L +GL +    +   KL  +M   G  AD +T+   I+
Sbjct: 813  YLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILIN 872

Query: 318  GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC-KSGRLEIALELFRSLPCGVLV 376
               ++G + +A +L + +  L    D   YN + +GL  KS   E  + L   L  GV +
Sbjct: 873  KYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGV-I 931

Query: 377  PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
            P    Y  +I G+C  G +  A  L  +ME      + +    ++RG +   +    + +
Sbjct: 932  PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLV 991

Query: 437  LHKMKEINVMP 447
            L  M  + ++P
Sbjct: 992  LDHMLRMRLLP 1002



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 149/312 (47%), Gaps = 2/312 (0%)

Query: 153 AKRLFIEMMDQGVQPNVV--TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
           +K +F  +MD     N +   F++++    K G +D A    +L+   G +P  +T N +
Sbjct: 145 SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMI 204

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           L       R      LF  M   G    V +++ILING C    ++ A +L  +M   G 
Sbjct: 205 LASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGF 264

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            P +V +NTL     +  + + A +L D M   G+ AD  TY  FID LC N    +A  
Sbjct: 265 VPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYL 324

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +R      +   YN+LI+G  K G++ +A ++F  +    L PN VTY+ +IGG C
Sbjct: 325 LLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHC 384

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
           + G  ++A  L   ME   +  N +T+  L+ G  +  +      LL +M+  +++    
Sbjct: 385 HVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI 444

Query: 451 IVSIVVDLLAKN 462
             ++++D L KN
Sbjct: 445 AYTVLIDGLCKN 456



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 129/257 (50%)

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           ++ L+  +   G +++A E F  +  +G K +V++ ++++    K+K  E   SL+ EM 
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            KGI P+V   N L  GL     +++A  L  +M+ NG      TY T ++  CK G   
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            A+EL   +     E D+  YN  ID LC + R   A  L + +   ++ PN VTY+ +I
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G   +G++  A  +F +M +  + PN +T++ LI G   + +  + + LL  M+   + 
Sbjct: 346 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 405

Query: 447 PDASIVSIVVDLLAKNE 463
            +      +++ L K+E
Sbjct: 406 LNEVTYGTLLNGLCKHE 422



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 131/285 (45%), Gaps = 6/285 (2%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD +TF SLI GL           L  K+ + G   D FT+  L+N    +     A +L
Sbjct: 827  PDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDL 886

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
               M N  G F     P+  TY  I +GL K+    ++  +L +M +  + P    Y ++
Sbjct: 887  VNFM-NTLGVF-----PDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITL 940

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
            I G C   D   A +L  EM   G   + V  + ++  L   GK ++A  +LD M++  +
Sbjct: 941  INGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRL 1000

Query: 201  RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             P   T+ TL+  FC   ++  A +L   ME  G K  V +Y++LI G C N +   A  
Sbjct: 1001 LPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFE 1060

Query: 261  LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
            LY EM  + + P++  +  L   +   + + +  KL  ++Q  G+
Sbjct: 1061 LYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1105



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 73/145 (50%)

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G I  AVE F  + ++  +  +   N ++  + K  R E+   LFR +    + PNV 
Sbjct: 175 KEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVG 234

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++I+I GLC +G + KA +L   MEEN  VP ++T++ L+  + +       IEL+  M
Sbjct: 235 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 294

Query: 441 KEINVMPDASIVSIVVDLLAKNEIS 465
               +  D    ++ +D L  N  S
Sbjct: 295 ICKGIEADVCTYNVFIDNLCTNHRS 319


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 222/443 (50%), Gaps = 6/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P   T++ L+        +     L  ++   G +P+V++YT  +  L +      A  +
Sbjct: 272 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRI 331

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM N        C+P+ +T+T +I  LC  G +  AK++  +MK  + KP+ VTY ++
Sbjct: 332 LAEMENEG------CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 385

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  F    +      ++  M   G   NVV +  ++D LC+ G++ EA  + D M Q G+
Sbjct: 386 LDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 445

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            P+ ++YN+L+ GF    R   A ELF  M+  G K   +++ + IN Y K+ E   A+ 
Sbjct: 446 VPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 505

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
            Y  M SKGI PDVV  N +  GL +  ++  A ++F E++  GV+ DT TY   I    
Sbjct: 506 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 565

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K     EAV++F+ +    C  D+   NSLID L K+GR + A ++F  L    L P   
Sbjct: 566 KASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDG 625

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           TY+ ++ GL  +G++ +   L  +M  +   PN+IT++ ++    +    +  +++L+ M
Sbjct: 626 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 685

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
                +PD S  + V+  L K E
Sbjct: 686 TTKGCIPDLSSYNTVIYGLVKEE 708



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 226/446 (50%), Gaps = 6/446 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     V   + +     +  TF ++  GL  E  +  A      ++  G   + +TY
Sbjct: 183 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 242

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV  L ++     AL +++ M       GVV  P+  TY+ ++    K   V+    L
Sbjct: 243 NGLVYFLVKSGFDREALEVYKVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVLWL 296

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M+   +KPNV +YT  IR    A+ ++EA R+  EM ++G +P+V+T  V++  LC 
Sbjct: 297 LREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCD 356

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++ +A  +   M +   +PD  TY TLLD F   G      E++ +M++ G    V +
Sbjct: 357 AGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVA 416

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ +I+  C+   +  AL ++ EM  KGI P+   +N+L  G  +  +   A +LF  M 
Sbjct: 417 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMD 476

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +G   + +T+  FI+   K+G  ++A++ +  ++      D+ A N+++ GL KSGRL 
Sbjct: 477 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 536

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +A  +F  L    + P+ +TY++MI       + D+A  +F DM EN  VP+V+  + LI
Sbjct: 537 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLI 596

Query: 422 RGFIRINEPSKVIELLHKMKEINVMP 447
               +     +  ++ +++KE+N+ P
Sbjct: 597 DTLYKAGRGDEAWQIFYQLKEMNLEP 622



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 230/448 (51%), Gaps = 12/448 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R    + +L  +      PD +T T LI+ LC   RI +A  +F K++    +PD  TY 
Sbjct: 324 RFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI 383

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TL++       +   + ++  M A+G  +       N V YT +ID LC+ G V +A E+
Sbjct: 384 TLLDKFADNGESQSVMEIWNAMKADGYND-------NVVAYTAVIDALCQVGRVFEALEM 436

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK K I P   +Y S+I GF  A  + +A  LF  M   G +PN  T  + ++   K
Sbjct: 437 FDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGK 496

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+  +A +  +LM   G+ PD    N +L G   +GR+  AK +F  +++MG      +
Sbjct: 497 SGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTIT 556

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+++I    K  + + A+ ++ +M+     PDV++ N+L   L++  + + A+++F +++
Sbjct: 557 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLK 616

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              +     TY T + GL + G + E + L   +       ++  YN+++D LCK+G + 
Sbjct: 617 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 676

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            AL++  S+     +P++ +Y+ +I GL  + + ++A  +F  M++  ++P+  T   ++
Sbjct: 677 DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYATLCTIL 735

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDA 449
             F++I     + E LH +KE  + P +
Sbjct: 736 PSFVKIG---LMKEALHIIKEYFLQPGS 760



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 209/442 (47%), Gaps = 8/442 (1%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD +   SLI  L    R  EA  +F +L+    EP   TY TL+ GL R       ++L
Sbjct: 587  PDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 646

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EEM + N        PN +TY TI+D LCK G V+ A ++L  M  K   P++ +Y +V
Sbjct: 647  LEEMYHSN------YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 700

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHG 199
            I G    + +NEA  +F +M  + + P+  T   I+    K G M EA  ++ +  +Q G
Sbjct: 701  IYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPG 759

Query: 200  VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             + D  + ++L++G         + E    + S G     F    LI   CK K+   A 
Sbjct: 760  SKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 819

Query: 260  SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             L  +  S G+      +N+L  GL + + ++ A  LF EM+  G   D +TY   +D +
Sbjct: 820  ELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 879

Query: 320  CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
             K+  I E +++   +     E     YN++I GL KS RLE A++L+ +L      P  
Sbjct: 880  GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 939

Query: 380  VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             TY  ++ GL   G+++ A +LF +M E     N   +++L+ G        KV  L   
Sbjct: 940  CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 999

Query: 440  MKEINVMPDASIVSIVVDLLAK 461
            M +  + PD    +I++D L K
Sbjct: 1000 MVDQGINPDIKSYTIIIDTLCK 1021



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 186/371 (50%), Gaps = 6/371 (1%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            I  S  T D      LIK LC + + +EA  L  K + FG      +Y +L+ GL   + 
Sbjct: 790  IASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENL 849

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
              +A  LF EM     E G  C P+  TY  ++D + K   +++  ++  +M  K  +  
Sbjct: 850  IDIAEGLFAEMK----ELG--CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYEST 903

Query: 134  VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             VTY ++I G   ++   +A  L+  +M QG  P   T+  ++D L K G++++A  L +
Sbjct: 904  YVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFN 963

Query: 194  LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
             M+++G + +   YN LL+G  + G       LF  M   G    + SY+I+I+  CK  
Sbjct: 964  EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1023

Query: 254  EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            ++   L+ + ++L  G++PD++ +N L  GL +  ++E A  LF+EMQ+ G+  + +TY 
Sbjct: 1024 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1083

Query: 314  TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
            + I  L K G   EA +++  L     + ++  YN+LI G   SG  + A   +  +  G
Sbjct: 1084 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1143

Query: 374  VLVPNVVTYSI 384
              +PN  T  I
Sbjct: 1144 GCLPNSSTCHI 1154



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 217/469 (46%), Gaps = 32/469 (6%)

Query: 16   KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
            K C  PD  ++ ++I GL  E R  EA ++F +++     PD  T  T++    +     
Sbjct: 688  KGCI-PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMK 745

Query: 76   VALNLFEEMANGNG-------------------------EFGVVCEPNTVTYT-----TI 105
             AL++ +E     G                         EF  +   + +T        +
Sbjct: 746  EALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPL 805

Query: 106  IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
            I  LCK+    +A EL+ + K   +     +Y S+I G       + A+ LF EM + G 
Sbjct: 806  IKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGC 865

Query: 166  QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
             P+  T+N+++D + K+ +++E  ++ + M + G      TYNT++ G   + R+  A +
Sbjct: 866  GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAID 925

Query: 226  LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
            L+ ++ S G   T  +Y  L++G  K   IE A +L++EML  G K +  I+N L  G  
Sbjct: 926  LYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 985

Query: 286  EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                 E+   LF +M   G+  D  +Y   ID LCK G + + +  F  L  +  E D+ 
Sbjct: 986  IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1045

Query: 346  AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
             YN LIDGL KS RLE A+ LF  +    +VPN+ TY+ +I  L   G+  +A  ++ ++
Sbjct: 1046 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1105

Query: 406  EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
                  PNV T++ LIRG+              +M     +P++S   I
Sbjct: 1106 LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHI 1154



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 216/452 (47%), Gaps = 16/452 (3%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G+V     +L  +  S + P+ +T+ +++  LC    + +A  +   +   GC PD+ +Y
Sbjct: 638  GKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSY 697

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA--- 118
             T++ GL +      A ++F +M         V  P+  T  TI+    K G + +A   
Sbjct: 698  NTVIYGLVKEERYNEAFSIFCQMKK-------VLIPDYATLCTILPSFVKIGLMKEALHI 750

Query: 119  -KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIM 176
             KE  LQ   K  + +     S++ G    K   E    F E++   G+  +      ++
Sbjct: 751  IKEYFLQPGSKTDRSSC---HSLMEGI-LKKAGTEKSIEFAEIIASSGITLDDFFLCPLI 806

Query: 177  DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              LCK  K  EA  L+      GV     +YN+L+ G      ++ A+ LF  M+ +GC 
Sbjct: 807  KHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCG 866

Query: 237  HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               F+Y++L++   K+  IE  L +  EM  KG +   V +NT+  GL +  ++E+A  L
Sbjct: 867  PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDL 926

Query: 297  FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            +  +   G +    TY   +DGL K G I +A  LF+ +    C+ +   YN L++G   
Sbjct: 927  YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 986

Query: 357  SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            +G  E    LF+ +    + P++ +Y+I+I  LC  GQ++     F  + E  + P++IT
Sbjct: 987  AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1046

Query: 417  FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +++LI G  +     + + L ++M++  ++P+
Sbjct: 1047 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPN 1078



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 193/372 (51%), Gaps = 2/372 (0%)

Query: 90  EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
           E G+V   N  TY  ++  L K GF  +A E+   M    + P+V TY+ ++  F   +D
Sbjct: 232 EAGIVL--NAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD 289

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
                 L  EM   GV+PNV ++ + +  L +  + DEA R+L  M   G +PD  T+  
Sbjct: 290 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTV 349

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           L+   C  GR++ AK++F  M+    K    +Y  L++ +  N E +  + +++ M + G
Sbjct: 350 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG 409

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
              +VV +  +   L ++ +V  A ++FDEM++ G+  + ++Y + I G  K     +A+
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 469

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
           ELF  + I   + +   +   I+   KSG    A++ +  +    +VP+VV  + ++ GL
Sbjct: 470 ELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 529

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
              G++  A+ +F +++   V P+ IT+ M+I+   + ++  + +++ + M E N +PD 
Sbjct: 530 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 589

Query: 450 SIVSIVVDLLAK 461
            +V+ ++D L K
Sbjct: 590 LVVNSLIDTLYK 601



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 218/463 (47%), Gaps = 8/463 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     +   + +    P+  ++ SLI G     R  +A  LF  + + G +P+ +T
Sbjct: 427 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYT 486

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +   +N   ++  +I A+  +E M +     G+V  P+ V    ++ GL K G +  AK 
Sbjct: 487 HVLFINYYGKSGESIKAIQRYELMKSK----GIV--PDVVAGNAVLFGLAKSGRLGMAKR 540

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  ++K   + P+ +TYT +I+    A  ++EA ++F +M++    P+V+  N ++D L 
Sbjct: 541 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLY 600

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+ DEA ++   + +  + P   TYNTLL G    G+V     L   M        + 
Sbjct: 601 KAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 660

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +++  CKN  +  AL +   M +KG  PD+  +NT+  GL +  +   AF +F +M
Sbjct: 661 TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 720

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGR 359
           ++  +  D  T  T +    K G + EA+ +     +    + D  + +SL++G+ K   
Sbjct: 721 KKV-LIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAG 779

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E ++E    +    +  +      +I  LC   +  +A +L    +   V     +++ 
Sbjct: 780 TEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNS 839

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           LI G +  N       L  +MKE+   PD    ++++D + K+
Sbjct: 840 LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 882



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 183/397 (46%), Gaps = 7/397 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+S    V  ++ KS   PD VT+ +L+              ++  ++  G   +V  Y
Sbjct: 358 GRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAY 417

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T +++ LC+      AL +F+EM     + G+V  P   +Y ++I G  K      A EL
Sbjct: 418 TAVIDALCQVGRVFEALEMFDEMK----QKGIV--PEQYSYNSLISGFLKADRFGDALEL 471

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M     KPN  T+   I  +  + +  +A + +  M  +G+ P+VV  N ++  L K
Sbjct: 472 FKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 531

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++  A R+   +   GV PD  TY  ++       + + A ++F  M    C   V  
Sbjct: 532 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLV 591

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            + LI+   K    + A  ++ ++    ++P    +NTL  GL    +V+    L +EM 
Sbjct: 592 VNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 651

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
            +    +  TY T +D LCKNG + +A+++ +++    C  D+ +YN++I GL K  R  
Sbjct: 652 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYN 711

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
            A  +F  +   VL+P+  T   ++      G M +A
Sbjct: 712 EAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEA 747



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%)

Query: 99  TVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI 158
           T +   ++D +   G V    E+   M+ + +K NV T+ ++  G         A     
Sbjct: 169 TASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALP 228

Query: 159 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
            M + G+  N  T+N ++  L K+G   EA  +  +M+  GV P   TY+ L+  F    
Sbjct: 229 VMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRR 288

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
            V     L   ME+ G K  V+SY+I I    + +  + A  + +EM ++G KPDV+ H 
Sbjct: 289 DVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHT 348

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            L   L +  ++  A  +F +M+++    D  TY T +D    NG     +E+++ ++  
Sbjct: 349 VLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKAD 408

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
               ++ AY ++ID LC+ GR+  ALE+F  +    +VP   +Y+ +I G     +   A
Sbjct: 409 GYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDA 468

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
            +LF  M+ +   PN  T  + I  + +  E  K I+    MK   ++PD    + V+  
Sbjct: 469 LELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 528

Query: 459 LAKN 462
           LAK+
Sbjct: 529 LAKS 532



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 175/371 (47%), Gaps = 10/371 (2%)

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTS-------VIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            D   E L + +    +P VV  T+       ++R      D  E   +F  M  Q V+ 
Sbjct: 146 ADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAE---VFDVMQRQIVKA 202

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           NV TF  I   L   G +  A   L +M + G+  +A+TYN L+     +G    A E++
Sbjct: 203 NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY 262

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G   +V +YS+L+  + K +++E  L L  EM + G+KP+V  +      L + 
Sbjct: 263 KVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQA 322

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            + + A+++  EM+  G   D  T+   I  LC  G I +A ++F  ++    + D   Y
Sbjct: 323 RRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTY 382

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            +L+D    +G  +  +E++ ++       NVV Y+ +I  LC  G++ +A ++F +M++
Sbjct: 383 ITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 442

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
             +VP   +++ LI GF++ +     +EL   M      P+     + ++   K+  S+ 
Sbjct: 443 KGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIK 502

Query: 468 SLPSFTVHEQQ 478
           ++  + + + +
Sbjct: 503 AIQRYELMKSK 513



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 136/323 (42%), Gaps = 39/323 (12%)

Query: 166 QPNVV----TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           +P VV    + N ++D +  +G++ + + + D+M +  V+ +  T+  +  G  + G + 
Sbjct: 162 RPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 221

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A      M+  G     ++Y+ L+    K+     AL +Y  M+  G+ P V  ++ L 
Sbjct: 222 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLM 281

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
           V   +   VE    L  EM+ +GV  + ++Y   I  L +     EA  +   +    C+
Sbjct: 282 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCK 341

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
                                              P+V+T++++I  LC+ G++  A+D+
Sbjct: 342 -----------------------------------PDVITHTVLIQVLCDAGRISDAKDV 366

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F  M+++   P+ +T+  L+  F    E   V+E+ + MK      +    + V+D L +
Sbjct: 367 FWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 426

Query: 462 NEISLNSLPSFTVHEQQEEVDES 484
                 +L  F   +Q+  V E 
Sbjct: 427 VGRVFEALEMFDEMKQKGIVPEQ 449



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 6/135 (4%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G+++ G     ++L+    PD +T+  LI GL    R+ EA +LF +++  G  P+++TY
Sbjct: 1023 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1082

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +L+  L +      A  ++EE+           +PN  TY  +I G    G  D A   
Sbjct: 1083 NSLILHLGKAGKAAEAGKMYEELLTKG------WKPNVFTYNALIRGYSVSGSTDSAYAA 1136

Query: 122  LLQMKDKNIKPNVVT 136
              +M      PN  T
Sbjct: 1137 YGRMIVGGCLPNSST 1151


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 240/474 (50%), Gaps = 33/474 (6%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           + GF  L  + K  F PD  +++++I  L    ++ +A  LF ++      PDV  Y  L
Sbjct: 168 ARGF--LNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNIL 225

Query: 65  VNGLCRTSHTIVALNLFEE----------------MANGNGEFGVV--C----------- 95
           ++G  +     +A+ L+++                M +G  + G V  C           
Sbjct: 226 IDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNE 285

Query: 96  -EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
            E +  TY+++I GLC EG VDKA+ +  ++ ++    +VVTY +++ GFC      E+ 
Sbjct: 286 REKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESL 345

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L+  +M+Q    N+V++N+++  L +NGK+DEA+ +  LM   G   D  TY   + G 
Sbjct: 346 ELW-RIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGL 404

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C+ G VN A  +   +ES G    V++Y+ +I+  CK + +E A +L  EM   G++ + 
Sbjct: 405 CVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNS 464

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
            + N L  GL    ++  A  L   M +NG      +Y   I GLC+ G   EA      
Sbjct: 465 HVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKE 524

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     + D++ Y+ L+ GLC+  ++E+ALEL+       L P+V+ ++I+I GLC+ G+
Sbjct: 525 MLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGK 584

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +D A  +  +ME      N++T++ L+ G+ ++ + ++   +   M ++ + PD
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPD 638



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 236/495 (47%), Gaps = 67/495 (13%)

Query: 28  SLIKGLCAESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE---- 82
           S+IK     S    A  +F ++R +FGCEP + +Y TL+N        +   +LF     
Sbjct: 83  SVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFET 142

Query: 83  -----------------------EMANG--NGEFGVVCEPNTVTYTTIIDGLCKEGFVDK 117
                                  E A G  N  +    +P+  +Y+T+I+ L K G +D 
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDD 202

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIM 176
           A EL  +M ++ + P+V  Y  +I GF   KD   A +L+ +++ D  V PNV T N+++
Sbjct: 203 ALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMI 262

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
             L K G++D+  ++ D M Q+    D +TY++L+ G C  G V+ A+ +F  +      
Sbjct: 263 SGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAF 322

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +Y+ ++ G+C+  +I+ +L L+  M  +    ++V +N L  GL E  +++ A  +
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMI 381

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           +  M   G AAD  TY  FI GLC NGY+ +A+ +   +       D+ AY S+ID LCK
Sbjct: 382 WRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCK 441

Query: 357 SGRLEIALELFRSLP----------CGVLV-------------------------PNVVT 381
             RLE A  L + +           C  L+                         P VV+
Sbjct: 442 KRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVS 501

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y+I+I GLC  G+  +A     +M EN + P++ T+ +L+ G  R  +    +EL H+  
Sbjct: 502 YNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFL 561

Query: 442 EINVMPDASIVSIVV 456
           +  + PD  + +I++
Sbjct: 562 QSGLEPDVMMHNILI 576



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 209/424 (49%), Gaps = 7/424 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +  R+ ++    D  T++SLI GLC E  + +A ++F +L       DV TY
Sbjct: 269 GRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTY 328

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ G CR      +L L+  M   N         N V+Y  +I GL + G +D+A  +
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEQRNS-------VNIVSYNILIKGLLENGKIDEATMI 381

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  K    +  TY   I G C     N+A  +  E+  +G   +V  +  I+D LCK
Sbjct: 382 WRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCK 441

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EAS L+  M +HGV  ++   N L+ G     R++ A  L   M   GC  TV S
Sbjct: 442 KRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVS 501

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI G C+  +   A +   EML  G+KPD+  ++ L  GL    ++E A +L+ +  
Sbjct: 502 YNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFL 561

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++G+  D   +   I GLC  G + +A+ +   +    C  ++  YN+L++G  K     
Sbjct: 562 QSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSN 621

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  ++  +    L P++++Y+ ++ GLC   ++  A + F D   + + P V T+++L+
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681

Query: 422 RGFI 425
           R  +
Sbjct: 682 RAVV 685



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 198/369 (53%), Gaps = 3/369 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEA 153
           C+ +     ++I    K    D+A ++  +M++    +P + +Y +++  F  AK W + 
Sbjct: 74  CKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKV 133

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           + LF      GV PN+ T+NV++   CK  + ++A   L+ M + G +PD F+Y+T+++ 
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVIND 193

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKP 272
              TG+++ A ELF  M        V  Y+ILI+G+ K K+ + A+ L+ ++L    + P
Sbjct: 194 LAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYP 253

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +V  HN +  GL +  +V+   K++D M++N    D +TY + I GLC  G + +A  +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVF 313

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
           + L   K   D+  YN+++ G C+ G+++ +LEL+R +     V N+V+Y+I+I GL  +
Sbjct: 314 NELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLEN 372

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G++D+A  ++  M       +  T+ + I G       +K + ++ +++      D    
Sbjct: 373 GKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAY 432

Query: 453 SIVVDLLAK 461
           + ++D L K
Sbjct: 433 ASIIDCLCK 441



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 145/287 (50%), Gaps = 5/287 (1%)

Query: 183 GKMDEASRLLDLMIQ----HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           GK     R LD+  +     G  P   +YNTLL+ F    +    + LF   E+ G    
Sbjct: 89  GKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPN 148

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           + +Y++LI   CK KE E A    + M  +G KPDV  ++T+   L +  +++ A +LFD
Sbjct: 149 LQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFD 208

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF-DIRAYNSLIDGLCKS 357
           EM    VA D   Y   IDG  K      A++L+  L      + +++ +N +I GL K 
Sbjct: 209 EMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKC 268

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           GR++  L+++  +       ++ TYS +I GLC++G +DKA  +F ++ E     +V+T+
Sbjct: 269 GRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTY 328

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
           + ++ GF R  +  + +EL   M++ N +   S   ++  LL   +I
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKI 375



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 6/227 (2%)

Query: 27  TSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
            +LI GL  +SR+ +A+ L   +   GC P V +Y  L+ GLC       A    +EM  
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
            NG      +P+  TY+ ++ GLC++  ++ A EL  Q     ++P+V+ +  +I G C 
Sbjct: 528 -NG-----LKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCS 581

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
               ++A  +   M  +    N+VT+N +M+   K    + A+ +   M + G++PD  +
Sbjct: 582 VGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIIS 641

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
           YNT+L G CL  RV++A E F    + G   TV++++IL+      K
Sbjct: 642 YNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRK 688



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V+  +     T + VT+ +L++G         A  ++  +   G +PD+ +
Sbjct: 582 VGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIIS 641

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTI 105
           Y T++ GLC       A+  F++ A  +G F  V   N +    +
Sbjct: 642 YNTILKGLCLCHRVSYAIEFFDD-ARNHGIFPTVYTWNILVRAVV 685


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/279 (39%), Positives = 160/279 (57%), Gaps = 6/279 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D V F +L+ GLC E R++EA AL  ++   G +P+  TY T+VNG+C+   T  ALNL 
Sbjct: 9   DVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLL 68

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
            +M   +       + + V YT IID LCK+G   KA+ L  +M DK I PNV+TY  +I
Sbjct: 69  RKMDESH------IKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMI 122

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C    W +A++L  +M++  V P+VVTFN +++   K GK+ EA  L   M+   + 
Sbjct: 123 DGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIF 182

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           PD  TYN+L+DGFC   R++ AK +F  M S G    V + + LI G C+ K ++  + L
Sbjct: 183 PDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKL 242

Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
             EML +G+ PD V +NTL  G  +   +  A  LF EM
Sbjct: 243 LHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           GC+ DV  + TL+NGLCR    + A  L + M   NG      +PN VTY TI++G+CK 
Sbjct: 5   GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVE-NGH-----QPNEVTYGTIVNGMCKM 58

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G  D A  LL +M + +IK +VV YT++I   C     ++A+ LF EM D+G+ PNV+T+
Sbjct: 59  GDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTY 118

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++D  C  GK  +A +LL  MI+  V PD  T+N L++ F   G+++ A+EL+  M  
Sbjct: 119 NCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLG 178

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
                   +Y+ LI+G+CK+  ++ A  ++  M+SKG  P+V+  NTL  G     +V+ 
Sbjct: 179 RNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDD 238

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
             KL  EM R G+  D+ +Y T I G C+ G +  A +LF  +
Sbjct: 239 GIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 150/281 (53%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+++G Q +VV FN +M+ LC+ G++ EA  L+D M+++G +P+  TY T+++G C  G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
            + A  L   M+    K  V  Y+ +I+  CK+     A +L++EM  KGI P+V+ +N 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  G     +   A +L  +M  + V  D  T+   I+   K G I EA EL+  +    
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
              D   YNSLIDG CK  RL+ A  +F  +      PNV+T + +IGG C   ++D   
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
            L  +M    +VP+ ++++ LI GF +  + +   +L  +M
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 144/281 (51%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M +K  + +VV + +++ G C      EA+ L   M++ G QPN VT+  I++ +CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
            D A  LL  M +  ++ D   Y  ++D  C  G  + A+ LF  M   G    V +Y+ 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           +I+G C   +   A  L  +M+   + PDVV  N L     +  ++  A +L+ EM    
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +  DT TY + IDG CK+  + +A  +F  +       ++   N+LI G C++ R++  +
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           +L   +    LVP+ V+Y+ +I G C  G ++ A+DLF +M
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 129/232 (55%), Gaps = 6/232 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG       +L ++ +S    D V +T++I  LC +    +A  LFT++   G  P+V T
Sbjct: 58  MGDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLT 117

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++G C       A  L  +M   N       +P+ VT+  +I+   KEG + +A+E
Sbjct: 118 YNCMIDGCCSYGKWTDAEQLLRDMIESN------VDPDVVTFNALINAFVKEGKISEAEE 171

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M  +NI P+ +TY S+I GFC     ++AK +F  M+ +G  PNV+T N ++   C
Sbjct: 172 LYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCC 231

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           +  ++D+  +LL  M++ G+ PD+ +YNTL+ GFC  G +N A++LF  M S
Sbjct: 232 RAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMIS 283



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 130/255 (50%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M++ G + D   +NTL++G C  GRV  A+ L   M   G +    +Y  ++NG CK  +
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            + AL+L  +M    IK DVVI+  +   L +     +A  LF EM   G+  +  TY  
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            IDG C  G   +A +L   +     + D+  +N+LI+   K G++  A EL+R +    
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + P+ +TY+ +I G C   ++D A+ +F  M      PNVIT + LI G  R       I
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 435 ELLHKMKEINVMPDA 449
           +LLH+M    ++PD+
Sbjct: 241 KLLHEMLRRGLVPDS 255



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 103/198 (52%)

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M+ KG + DVV  NTL  GL    +V  A  L D M  NG   +  TY T ++G+CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
              A+ L   +     + D+  Y ++ID LCK G    A  LF  +    + PNV+TY+ 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           MI G C+ G+   A  L  DM E+ V P+V+TF+ LI  F++  + S+  EL  +M   N
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 445 VMPDASIVSIVVDLLAKN 462
           + PD    + ++D   K+
Sbjct: 181 IFPDTITYNSLIDGFCKH 198


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 217/473 (45%), Gaps = 59/473 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV   F + GR+ +   TP  VTF  LI GL    R  E   +  ++   G  P+   Y
Sbjct: 60  GRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIY 119

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+   CR  H   AL LF+EM           +P  VTY  I   LCKEG +++A+ +
Sbjct: 120 NELIGWHCRKGHCSQALRLFDEMVLKK------MKPTAVTYNLIAKALCKEGEMERAERI 173

Query: 122 L----------------------LQ--------------MKDKNIKPNVVTYTSVIRGFC 145
           L                      LQ              M  + ++PN    T+ +R  C
Sbjct: 174 LEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELC 233

Query: 146 YA-----------------KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
                              K   EA ++   M+++G++ + +T+N+++   CK+ KM+EA
Sbjct: 234 KGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEA 293

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
            +L   M + G +PD FT+NTLL  +C  G++     L   M++ G +  + SY  +I+G
Sbjct: 294 IKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG 353

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
           +CK K+I  A    +E++ +G+KP+V I+N L  G      +  A    + M+ NG+   
Sbjct: 354 HCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPT 413

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
             TY + +  +C  G + EA  +F   R    +  +  Y  +I G CK G++  A+  F 
Sbjct: 414 NVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFE 473

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            +    + PN +TY+ ++      G  ++A  LF +M  + V+P+ IT+  LI
Sbjct: 474 EMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 223/465 (47%), Gaps = 24/465 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V  GF +L  + ++   P  VT+  L+  LC   R+ EA  L  ++   G  P V T+
Sbjct: 25  GKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTF 84

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+NGL R         + +EM     + GV   PN V Y  +I   C++G   +A  L
Sbjct: 85  GILINGLARGERFGEVGIVLQEME----QLGV--SPNEVIYNELIGWHCRKGHCSQALRL 138

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC- 180
             +M  K +KP  VTY  + +  C   +   A+R+  +M+  G+  +   FN ++  L  
Sbjct: 139 FDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ 198

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR-----------------VNHA 223
           +  +++    + + M+  G+RP+       +   C  G+                 +  A
Sbjct: 199 RTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEA 258

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
            ++  +M + G +    +Y+I+I G CK+ ++E A+ L+ +M  +G KPD+   NTL   
Sbjct: 259 TKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHA 318

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
              + ++E  F L D+M+  G+  D  +Y T IDG CK   I +A E    L     + +
Sbjct: 319 YCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPN 378

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +  YN+LI G  ++G +  A++   ++    + P  VTY  ++  +C+ G +++A+ +F 
Sbjct: 379 VFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFS 438

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
              EN V   VI + ++I+G+ ++ +  + +    +M+   + P+
Sbjct: 439 QARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 483



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 152/301 (50%), Gaps = 10/301 (3%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
            + F +L KG      + EA  +   +   G E D  TY  ++ G C+ S    A+ L  
Sbjct: 243 GIWFKTLNKG----KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHG 298

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           +M           +P+  T+ T++   C  G +++   LL QMK + ++P++V+Y ++I 
Sbjct: 299 DMTRRG------FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIID 352

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G C AKD  +AK    E+MD+G++PNV  +N ++    +NG +  A   ++ M  +G++P
Sbjct: 353 GHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQP 412

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
              TY +L+   C  G V  AK +F           V  Y+I+I GYCK  ++  A++ +
Sbjct: 413 TNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYF 472

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM S+GI P+ + + TL     +    E A KLFDEM  +GV  D  TY T I    + 
Sbjct: 473 EEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEK 532

Query: 323 G 323
           G
Sbjct: 533 G 533



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 179/383 (46%), Gaps = 18/383 (4%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           N  +YT +I  LCK G VD   E+L ++    ++P VVTY  ++   C +    EA RL 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
             M   G+ P+VVTF ++++ L +  +  E   +L  M Q GV P+   YN L+   C  
Sbjct: 70  GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRK 129

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
           G  + A  LF  M     K T  +Y+++    CK  E+E A  +  +MLS G+     + 
Sbjct: 130 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 189

Query: 278 NTLFVGLFE-IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG------------- 323
           NT+   L +   ++E    + +EM   G+  +       +  LCK G             
Sbjct: 190 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 249

Query: 324 ----YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
               Y+ EA ++  T+     E D   YN +I G CK  ++E A++L   +      P++
Sbjct: 250 NKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 309

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
            T++ ++   CN G+M++   L   M+   + P+++++  +I G  +  +  K  E L +
Sbjct: 310 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTE 369

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           + +  + P+  I + ++    +N
Sbjct: 370 LMDRGLKPNVFIYNALIGGYGRN 392



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 24/353 (6%)

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           + +N+  N  +YT++I+  C A   +    +  E+   G+QP VVT+NV+MD LCK+G++
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           +EA RL   M Q G+ P   T+  L++G     R      +   ME +G       Y+ L
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I  +C+      AL L+ EM+ K +KP  V +N +   L +  ++ERA ++ ++M   G+
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 182

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG----LCKSGRLE 361
                 + T +  L +    +E+V       + +    +R  + L+      LCK G+ +
Sbjct: 183 TVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTR---GMRPNDPLMTACMRELCKGGKHQ 239

Query: 362 IALEL-FRSLPCGVLVPNV----------------VTYSIMIGGLCNDGQMDKARDLFLD 404
            A+ + F++L  G  +                   +TY+IMI G C D +M++A  L  D
Sbjct: 240 EAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGD 299

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           M      P++ TF+ L+  +  + +  +   LL +MK   + PD      ++D
Sbjct: 300 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIID 352



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 6/211 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   F +L ++      PD V++ ++I G C    I +A    T+L   G +P+VF 
Sbjct: 322 LGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFI 381

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ G  R      A++  E M + NG      +P  VTY +++  +C  G V++AK 
Sbjct: 382 YNALIGGYGRNGDISGAIDAVETMKS-NG-----IQPTNVTYGSLMYWMCHAGLVEEAKT 435

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  Q ++ N+   V+ YT +I+G+C      EA   F EM  +G+ PN +T+  +M    
Sbjct: 436 IFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYS 495

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           K+G  +EAS+L D M+  GV PD  TY TL+
Sbjct: 496 KSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%)

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           VA + ++Y   I  LCK G +    E+   L     +  +  YN L+D LCKSGR+E A 
Sbjct: 7   VALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 66

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            L   +  G + P+VVT+ I+I GL    +  +   +  +ME+  V PN + ++ LI   
Sbjct: 67  RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 126

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            R    S+ + L  +M    + P A   +++   L K
Sbjct: 127 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCK 163



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 2/208 (0%)

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           S+ +  +   +  +   L +  +V+  F++  E+ R G+     TY   +D LCK+G + 
Sbjct: 4   SRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVE 63

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL-EIALELFRSLPCGVLVPNVVTYSIM 385
           EA  L   +        +  +  LI+GL +  R  E+ + L      GV  PN V Y+ +
Sbjct: 64  EAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGV-SPNEVIYNEL 122

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           IG  C  G   +A  LF +M    + P  +T++++ +   +  E  +   +L  M  I +
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 182

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSFT 473
                + + VV  L +    L S+ S T
Sbjct: 183 TVHCGLFNTVVAWLLQRTRRLESVVSIT 210


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 236/474 (49%), Gaps = 33/474 (6%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           + GF  L  + K  F PD  +++++I  L    ++ +A  LF ++   G  PDV  Y  L
Sbjct: 168 ARGF--LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225

Query: 65  VNGLCRTSHTIVALNLFEE----------------MANGNGEFGVV--C----------- 95
           ++G  +      A+ L++                 M +G  + G V  C           
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285

Query: 96  -EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
            E +  TY+++I GLC  G VDKA+ +  ++ ++    +VVTY +++ GFC      E+ 
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L+  +M+     N+V++N+++  L +NGK+DEA+ +  LM   G   D  TY   + G 
Sbjct: 346 ELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C+ G VN A  +   +ES G    V++Y+ +I+  CK K +E A +L  EM   G++ + 
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
            + N L  GL    ++  A     EM +NG      +Y   I GLCK G   EA      
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +     + D++ Y+ L+ GLC+  ++++ALEL+       L  +V+ ++I+I GLC+ G+
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +D A  +  +ME      N++T++ L+ GF ++ + ++   +   M ++ + PD
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 206/424 (48%), Gaps = 7/424 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +  R+ ++    D  T++SLI GLC    + +A ++F +L       DV TY
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++ G CR      +L L+  M + N         N V+Y  +I GL + G +D+A  +
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEHKNS-------VNIVSYNILIKGLLENGKIDEATMI 381

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              M  K    +  TY   I G C     N+A  +  E+   G   +V  +  I+D LCK
Sbjct: 382 WRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCK 441

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EAS L+  M +HGV  ++   N L+ G     R+  A      M   GC+ TV S
Sbjct: 442 KKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVS 501

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ILI G CK  +   A +   EML  G KPD+  ++ L  GL    +++ A +L+ +  
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           ++G+  D   +   I GLC  G + +A+ +   +    C  ++  YN+L++G  K G   
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  ++  +    L P++++Y+ ++ GLC    +  A + F D   + + P V T+++L+
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681

Query: 422 RGFI 425
           R  +
Sbjct: 682 RAVV 685



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 198/371 (53%), Gaps = 3/371 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEA 153
           C+ +     ++I    K    D+A ++  +M++    +P + +Y +++  F  AK W + 
Sbjct: 74  CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV 133

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           + LF      GV PN+ T+NV++   CK  + ++A   LD M + G +PD F+Y+T+++ 
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIND 193

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKP 272
               G+++ A ELF  M   G    V  Y+ILI+G+ K K+ + A+ L+  +L    + P
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP 253

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +V  HN +  GL +  +V+   K+++ M++N    D +TY + I GLC  G + +A  +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
           + L   K   D+  YN+++ G C+ G+++ +LEL+R +     V N+V+Y+I+I GL  +
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLEN 372

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
           G++D+A  ++  M       +  T+ + I G       +K + ++ +++      D    
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432

Query: 453 SIVVDLLAKNE 463
           + ++D L K +
Sbjct: 433 ASIIDCLCKKK 443



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 210/425 (49%), Gaps = 10/425 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +   AV +  +++ L     +   + +   +R   C+ D     +++    + S    AL
Sbjct: 39  YAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQAL 98

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           ++F+ M    G     CEP   +Y T+++   +     K + L    +   + PN+ TY 
Sbjct: 99  DVFKRMREIFG-----CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I+  C  K++ +A+     M  +G +P+V +++ ++++L K GK+D+A  L D M + 
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEG 257
           GV PD   YN L+DGF        A EL+  + E       V +++I+I+G  K   ++ 
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
            L ++  M     + D+  +++L  GL +   V++A  +F+E+     + D  TY T + 
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C+ G I E++EL+  +   K   +I +YN LI GL ++G+++ A  ++R +P      
Sbjct: 334 GFCRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKVI 434
           +  TY I I GLC +G ++KA  +  ++E +    +V  +  +I       R+ E S ++
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452

Query: 435 ELLHK 439
           + + K
Sbjct: 453 KEMSK 457



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 161/334 (48%), Gaps = 2/334 (0%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           + V Y  ++R     +  N   R+   +  Q  + +      ++    KN   D+A  + 
Sbjct: 42  SAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVF 101

Query: 193 DLMIQ-HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
             M +  G  P   +YNTLL+ F    +    + LF   E+ G    + +Y++LI   CK
Sbjct: 102 KRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCK 161

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
            KE E A      M  +G KPDV  ++T+   L +  +++ A +LFDEM   GVA D   
Sbjct: 162 KKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTC 221

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEF-DIRAYNSLIDGLCKSGRLEIALELFRSL 370
           Y   IDG  K      A+EL+  L      + +++ +N +I GL K GR++  L+++  +
Sbjct: 222 YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM 281

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
                  ++ TYS +I GLC+ G +DKA  +F +++E     +V+T++ ++ GF R  + 
Sbjct: 282 KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKI 341

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
            + +EL   M+  N +   S   ++  LL   +I
Sbjct: 342 KESLELWRIMEHKNSVNIVSYNILIKGLLENGKI 375



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 6/106 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     V+  +     T + VT+ +L++G         A  ++  +   G +PD+ +
Sbjct: 582 VGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIIS 641

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTII 106
           Y T++ GLC       A+  F++  N +G F     P   T+  ++
Sbjct: 642 YNTIMKGLCMCRGVSYAMEFFDDARN-HGIF-----PTVYTWNILV 681


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 232/492 (47%), Gaps = 48/492 (9%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           R L S   P    +  LI     ESR+    AL+  L + G +PDVFT   L+  LC   
Sbjct: 100 RALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAG 159

Query: 73  HTIVALNLFEEMANGNG-EFGVVCEP--------------------NTVTYTTIIDGLCK 111
              +A  +F+ M   N   FG++                       N V   T++ G CK
Sbjct: 160 RMELAQRVFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCK 219

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD---QGV-QP 167
           EG V++A+ L+ +M+ + + PNVVT+ + I   C A    +A R+F +M +    G+ +P
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRP 279

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           + VTF+V++   C  G +DEA  L+D+M   G      +YN  L G    GRV  A+EL 
Sbjct: 280 DQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELL 339

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M   G +   ++Y+I+++G CK  +   A  + + + S  + PDVV + +L       
Sbjct: 340 REMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSK 399

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
             +  A ++ DEM + G A +++TY   +  L + G   EA  L   +       D    
Sbjct: 400 GNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGC 459

Query: 348 NSLIDGLCKSGRLEIALELFRSL---PCGVL--------------------VPNVVTYSI 384
           N +IDGLC++ RL++A+++   +     G L                    +P+ +TYSI
Sbjct: 460 NIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSI 519

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I  LC +G+ D+A+   L+M    + P+ + +D  I G+ +  + S  I++L  M++  
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579

Query: 445 VMPDASIVSIVV 456
             P     ++++
Sbjct: 580 CNPSTRTYNLLI 591



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 227/499 (45%), Gaps = 35/499 (7%)

Query: 2   GRVSHGFVVLGR------ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           G ++ G+   GR      +L    + + V   +++ G C E  + EA  L  ++RV G  
Sbjct: 180 GILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLA 239

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+V T+   ++ LC+    + A  +F++M   + + G+   P+ VT+  ++ G C  GFV
Sbjct: 240 PNVVTFNARISALCKAGRVLDAYRIFQDMQE-DWQHGLP-RPDQVTFDVMLSGFCDAGFV 297

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           D+A+ L+  M+       V +Y   + G        EA+ L  EM  +G+QPN  T+N+I
Sbjct: 298 DEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNII 357

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LCK GK  +A R+ + +    + PD  TY +LL  +C  G +  A  +   M   GC
Sbjct: 358 VSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGC 417

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
               F+Y++L+    +      A  L   M  KG   D    N +  GL    +++ A  
Sbjct: 418 APNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMD 477

Query: 296 LFDEMQRNGVAA-----------------------DTWTYRTFIDGLCKNGYIVEAVELF 332
           + D M   G  A                       D  TY   I  LCK G   EA +  
Sbjct: 478 IVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKL 537

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             + +     D   Y++ I G CK G+  +A+++ R +      P+  TY+++I G    
Sbjct: 538 LEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEK 597

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
            + ++   L  +M+E  + PNV+T++ LI+ F +    +K + LL +M +  ++P+  I 
Sbjct: 598 HKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPN--IT 655

Query: 453 SIVVDLLAKNEISLNSLPS 471
           S   DLL K    +   PS
Sbjct: 656 SF--DLLIKAYCKITDFPS 672



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 183/405 (45%), Gaps = 29/405 (7%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD VTF  ++ G C    + EA  L   +R  G    V +Y   ++GL R      A  L
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQEL 338

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EMA+         +PN+ TY  I+ GLCKEG    A+ +   ++   + P+VVTYTS+
Sbjct: 339 LREMAHEG------IQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSL 392

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +  +C   +   A R+  EM  +G  PN  T+NV++  L + G+  EA RLL+ M + G 
Sbjct: 393 LHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGY 452

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-----------------------CKH 237
             D    N ++DG C   R++ A ++   M   G                       C  
Sbjct: 453 SLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLP 512

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
              +YSILI+  CK    + A     EM+ K I PD VI++T   G  +  +   A K+ 
Sbjct: 513 DQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVL 572

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            +M++ G    T TY   I G  +     E ++L   ++      ++  YNSLI   C+ 
Sbjct: 573 RDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQ 632

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           G +  A+ L   +    LVPN+ ++ ++I   C       A+ +F
Sbjct: 633 GMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVF 677



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 185/426 (43%), Gaps = 63/426 (14%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV     +L  +      P++ T+  ++ GLC E +  +A  +   +R     PDV TY
Sbjct: 330 GRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTY 389

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++  C   +   A  + +EMA         C PN+ TY  ++  L + G   +A+ L
Sbjct: 390 TSLLHAYCSKGNIAAANRILDEMAQKG------CAPNSFTYNVLLQSLWRAGRTTEAERL 443

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCY------AKD-----WNEAK----RL---FIEM--- 160
           L +M +K    +      +I G C       A D     W E      RL   F+ +   
Sbjct: 444 LERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSD 503

Query: 161 --MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
             + Q   P+ +T+++++  LCK G+ DEA + L  MI   + PD+  Y+T + G+C  G
Sbjct: 504 SSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHG 563

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
           + + A ++   ME  GC  +  +Y++LI G+ +  + E  + L SEM  KGI P+V+ +N
Sbjct: 564 KTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYN 623

Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK----------------- 321
           +L     +   V +A  L DEM +N +  +  ++   I   CK                 
Sbjct: 624 SLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRT 683

Query: 322 -----------------NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
                             G  +EA  +      ++       Y  +I GLC+ G ++ A 
Sbjct: 684 CGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAH 743

Query: 365 ELFRSL 370
            L + L
Sbjct: 744 SLLKLL 749



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 179/400 (44%), Gaps = 57/400 (14%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL--------- 64
           I     +PD VT+TSL+   C++  I  A  +  ++   GC P+ FTY  L         
Sbjct: 377 IRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGR 436

Query: 65  --------------------------VNGLCRTSHTIVALNLFEEM-ANGNGEFGVV--- 94
                                     ++GLCR S   VA+++ + M   G+G  G +   
Sbjct: 437 TTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNS 496

Query: 95  -------------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
                        C P+ +TY+ +I  LCKEG  D+AK+ LL+M  K+I P+ V Y + I
Sbjct: 497 FLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFI 556

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C     + A ++  +M  +G  P+  T+N+++    +  K +E  +L+  M + G+ 
Sbjct: 557 HGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGIS 616

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P+  TYN+L+  FC  G VN A  L   M        + S+ +LI  YCK  +   A  +
Sbjct: 617 PNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMV 676

Query: 262 YSEMLSKGIKPDVV--IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           +   L    + +V+  +  T      +  + +   ++  EM+   V+  ++ Y+  I GL
Sbjct: 677 FDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMR---VSIQSFPYKQIISGL 733

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           C+ G +  A  L   L   +  FD  A+  +ID L   G+
Sbjct: 734 CEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGK 773



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 73/338 (21%)

Query: 1   MGRVSHGFVVL---GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD 57
           +GR+ + F+ +     I + C  PD +T++ LI  LC E R  EA     ++ V    PD
Sbjct: 490 LGRLGNSFLSVVSDSSISQRCL-PDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPD 548

Query: 58  VFTYTTLVNGLCRTSHTIVALNL----------------------FEEMANGNGEFGVVC 95
              Y T ++G C+   T +A+ +                      FEE         ++ 
Sbjct: 549 SVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMS 608

Query: 96  E-------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           E       PN +TY ++I   C++G V+KA  LL +M    + PN+ ++  +I+ +C   
Sbjct: 609 EMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKIT 668

Query: 149 D----------------------------------WNEAKRLFIEMMDQGVQPNVVTFNV 174
           D                                  W EAK +    ++  V      +  
Sbjct: 669 DFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQ 728

Query: 175 IMDELCKNGKMDEASRLLDLMI--QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           I+  LC+ G++D A  LL L+I  +H   P AF    ++D     G+      L   M  
Sbjct: 729 IISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFM--PVIDALGDRGKKQDVDMLSAKMME 786

Query: 233 MGCKHTVFSYSI--LINGYCKNKEIEGALSLYSEMLSK 268
           M  ++         +  G CK++      S +  +L +
Sbjct: 787 MADRNDGLGTDSGKITPGSCKHEHDRNGESDWRTLLHR 824


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/325 (34%), Positives = 177/325 (54%), Gaps = 2/325 (0%)

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           +V++Y+  I G C      EA  +F EM ++G  P+  T+N++++ LCK+ +++    L+
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           D M   G  P   TY TL+ GFC  GRV+ A ++   ME  G      +Y+ LI G C  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 253 KEIEGALSLYSEMLSKGIK--PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
            E+E A+ +  EM  +G +  P+VV +  L  GL +    E   +  DEM  +G   +  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY   I GLC+ G  +EA  L + +  + CE D+  YNSLIDGLCK G L+ A E+   +
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               + P+V TY+ +I GLC+ G +D+A  L  +M    +VPN +T+  LI GF + +  
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389

Query: 431 SKVIELLHKMKEINVMPDASIVSIV 455
              ++L+++MK   +MP   I  I+
Sbjct: 390 DHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 171/318 (53%), Gaps = 10/318 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D ++++  I GLC + +I EA  +F ++   G  PD FTY  L+NGLC+ +   + ++L 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 82  EEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           +EM A G         P  VTYTT+I G C  G VD A ++L +M+ + I PN VTYT++
Sbjct: 150 DEMQARG-------FSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTAL 202

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQ--PNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           I+G C   +   A  +  EM  +G +  PNVVT+  ++  LC+ G  +     LD MI  
Sbjct: 203 IQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIIS 262

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G  P+  TY  L+ G C  G    A  L   M ++GC+  V  Y+ LI+G CK  E++ A
Sbjct: 263 GCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFA 322

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             +   M+ KG+ PDV  + +L  GL +   ++ A  L  EM+  G+  ++ TY T I+G
Sbjct: 323 REMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLING 382

Query: 319 LCKNGYIVEAVELFHTLR 336
             +      A++L + ++
Sbjct: 383 FTQADRTDHALQLVNEMK 400



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 169/320 (52%), Gaps = 8/320 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++    +   + +    PD+ T+  LI GLC ++++    +L  +++  G  P V TY
Sbjct: 105 GQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTY 164

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++G C       A+++ +EM +     G+   PNTVTYT +I GLC  G V++A  +
Sbjct: 165 TTLIHGFCTAGRVDAAMDILDEMEH----RGIT--PNTVTYTALIQGLCDCGEVERAILV 218

Query: 122 LLQMKDKNIK--PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           L +MK +  +  PNVVTYT +I G C    +        EM+  G  PN  T+  ++  L
Sbjct: 219 LKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGL 278

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+ G   EA+ LL+ M+  G   D   YN+L+DG C  G ++ A+E+ + M   G    V
Sbjct: 279 CQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDV 338

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           F+Y+ LI G C    ++ AL L  EM +KGI P+ V + TL  G  +  + + A +L +E
Sbjct: 339 FTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNE 398

Query: 300 MQRNGVAADTWTYRTFIDGL 319
           M+ NG+      Y+     L
Sbjct: 399 MKSNGLMPAGDIYKILFKSL 418



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 170/335 (50%), Gaps = 8/335 (2%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           DV +Y+  +NGLC+      A+ +F EM            P++ TY  +I+GLCK+  ++
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGS------APDSFTYNILINGLCKDAQLE 143

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
               L+ +M+ +   P VVTYT++I GFC A   + A  +  EM  +G+ PN VT+  ++
Sbjct: 144 MGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALI 203

Query: 177 DELCKNGKMDEASRLLDLMIQHGVR--PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
             LC  G+++ A  +L  M   G    P+  TY  L+ G C  G      E    M   G
Sbjct: 204 QGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISG 263

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C     +Y+ LI+G C+      A  L +EM++ G + DVVI+N+L  GL ++ +++ A 
Sbjct: 264 CFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAR 323

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           ++   M   GVA D +TY + I GLC  G + EA+ L   +R      +   Y +LI+G 
Sbjct: 324 EMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGF 383

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
            ++ R + AL+L   +    L+P    Y I+   L
Sbjct: 384 TQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 148/284 (52%), Gaps = 4/284 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            ++  G  ++  +    F+P  VT+T+LI G C   R+  A  +  ++   G  P+  TY
Sbjct: 140 AQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTY 199

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T L+ GLC       A+ + +EM     E    C PN VTYT +I GLC++G  +   E 
Sbjct: 200 TALIQGLCDCGEVERAILVLKEMKLRGNE----CCPNVVTYTQLIHGLCQKGLFEMGMEF 255

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M      PN  TYT++I G C    + EA  L  EM+  G + +VV +N ++D LCK
Sbjct: 256 LDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCK 315

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G++D A  +  LM++ GV PD FTY +L+ G C  G ++ A  L   M + G      +
Sbjct: 316 MGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVT 375

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           Y+ LING+ +    + AL L +EM S G+ P   I+  LF  L+
Sbjct: 376 YTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSLY 419



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 157/293 (53%), Gaps = 4/293 (1%)

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           +V++++  ++ LCK G++ EA  +   M + G  PD+FTYN L++G C   ++     L 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M++ G   TV +Y+ LI+G+C    ++ A+ +  EM  +GI P+ V +  L  GL + 
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 288 HQVERAFKLFDEMQRNG--VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
            +VERA  +  EM+  G     +  TY   I GLC+ G     +E    + I  C  +  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 346 AYNSLIDGLCKSGR-LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            Y +LI GLC+ G  LE A+ L   +  G  + +VV Y+ +I GLC  G++D AR++ + 
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCEL-DVVIYNSLIDGLCKMGELDFAREMQIL 328

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           M E  V P+V T+  LI+G        + + L+ +M+   ++P++   + +++
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLIN 381



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 107/225 (47%), Gaps = 2/225 (0%)

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V SYS  ING CK  +I  A+ ++ EM  KG  PD   +N L  GL +  Q+E    L D
Sbjct: 91  VISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMD 150

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
           EMQ  G +    TY T I G C  G +  A+++   +       +   Y +LI GLC  G
Sbjct: 151 EMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCG 210

Query: 359 RLEIALELFR--SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            +E A+ + +   L      PNVVTY+ +I GLC  G  +   +   +M  +   PN  T
Sbjct: 211 EVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNAT 270

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  LI G  +     +   LL++M  I    D  I + ++D L K
Sbjct: 271 YTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCK 315



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 2/213 (0%)

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           + + I  +L +Y   L      DV+ ++    GL +  Q+  A ++F EM+  G A D++
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           TY   I+GLCK+  +   V L   ++       +  Y +LI G C +GR++ A+++   +
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME--ENAVVPNVITFDMLIRGFIRIN 428
               + PN VTY+ +I GLC+ G++++A  +  +M+   N   PNV+T+  LI G  +  
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                +E L +M      P+ +  + ++  L +
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQ 280


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 213/419 (50%), Gaps = 6/419 (1%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
           L  ++   G +P+V++YT  +  L +      A  + ++M +        C+P+ VT T 
Sbjct: 238 LLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEG------CKPDVVTNTV 291

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           +I  LC  G V  AK++  +MK  + KP+ VTY +++       D      ++  M   G
Sbjct: 292 LIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADG 351

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
              NVV +  ++D LC+ G++DEAS + D M Q G+ P  ++YN+L+ GF    R+NHA 
Sbjct: 352 YNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHAL 411

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           ELF  M   G     ++Y + IN Y K+ E   A+  Y  M SKGI PDVV  N +   L
Sbjct: 412 ELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSL 471

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +  ++  A ++F E++  GV  D  TY   I    K     EA+++F  +   +C  D+
Sbjct: 472 AKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDV 531

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
            A NSLID L K+GR   A ++F  L    L P   TY+ ++ GL  +G++ +   L  +
Sbjct: 532 LAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEE 591

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           M  N+  PN+IT++ ++    +  E +  + +L+ M     MPD S  +  +  L K +
Sbjct: 592 MNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKED 650



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 226/449 (50%), Gaps = 12/449 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR    + +L ++      PD VT T LI+ LC   R+ +A  +F K++    +PD  TY
Sbjct: 265 GRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTY 324

Query: 62  TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            TL++       +   + ++  M A+G  +       N V YT ++D LC+ G VD+A +
Sbjct: 325 ITLLDKCGDNGDSRSVIEIWNAMKADGYND-------NVVAYTAVVDALCQVGRVDEASD 377

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  QMK K I+P   +Y S+I GF  A   N A  LF  M   G  PN  T+ + ++   
Sbjct: 378 VFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYG 437

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K+G+  +A +  +LM   G+ PD    N +L     +GR+  AK +F  ++S+G      
Sbjct: 438 KSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNI 497

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I    K    + A+ ++SEM+     PDV+  N+L   L++  +   A+K+F E+
Sbjct: 498 TYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHEL 557

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +   +     TY T + GL + G + E + L   +       ++  YN+++D LCK+G +
Sbjct: 558 KEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEV 617

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             AL +  ++     +P++ +Y+  + GL  + ++ +A  +F  M++  + P+  T   +
Sbjct: 618 NYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKK-VLAPDYTTLCTI 676

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDA 449
           +  F++      + E LH +KE  + P +
Sbjct: 677 LPSFVK---NGLMNEALHTLKEYILQPGS 702



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 229/466 (49%), Gaps = 14/466 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV     V  ++ +    P   ++ SLI G     R+  A  LF  + + G  P+ +T
Sbjct: 369 VGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYT 428

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y   +N   ++  ++ A+  +E M +     G+V  P+ V    ++  L K G +  AK 
Sbjct: 429 YVLFINYYGKSGESLKAIKRYELMKSK----GIV--PDVVAGNAVLYSLAKSGRLGMAKR 482

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  ++K   + P+ +TYT +I+    A + +EA ++F EM++    P+V+  N ++D L 
Sbjct: 483 VFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLY 542

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+ +EA ++   + +  + P   TYNTLL G    G+V     L   M S      + 
Sbjct: 543 KAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLI 602

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ +++  CKN E+  AL +   M  KG  PD+  +NT   GL +  ++  AF++F +M
Sbjct: 603 TYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM 662

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR--ILK--CEFDIRAYNSLIDGLCK 356
           ++  +A D  T  T +    KNG + EA+   HTL+  IL+   + D  +++SL++G+ K
Sbjct: 663 KKV-LAPDYTTLCTILPSFVKNGLMNEAL---HTLKEYILQPGSKADRSSFHSLMEGILK 718

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
              +E ++E   ++    ++ +    S +I  LC   +  +A +L    E   V     +
Sbjct: 719 RAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGS 778

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++ LI G +  N       L  +MK +   PD    ++++D + K+
Sbjct: 779 YNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKS 824



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 232/522 (44%), Gaps = 76/522 (14%)

Query: 10   VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
            V   ++++   PD +   SLI  L    R  EA  +F +L+    +P   TY TL+ GL 
Sbjct: 518  VFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLG 577

Query: 70   RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
            R       ++L EEM N N        PN +TY T++D LCK G V+ A  +L  M  K 
Sbjct: 578  REGKVKEVMHLLEEM-NSNSY-----PPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKG 631

Query: 130  IKPNVVTYTSVIRG-------------FCY-----AKDW----------------NEAKR 155
              P++ +Y + + G             FC      A D+                NEA  
Sbjct: 632  CMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALH 691

Query: 156  LFIE-MMDQGVQPNVVTFNVIMD-----------------------------------EL 179
               E ++  G + +  +F+ +M+                                    L
Sbjct: 692  TLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHL 751

Query: 180  CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            CK+ K  EA  L+      GV     +YN L+ G      ++ A+ LF  M+ +GC    
Sbjct: 752  CKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDE 811

Query: 240  FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            F+Y+++++   K+  IE  L +  EM  KG +   V +NT+  GL +   +  A  L+ +
Sbjct: 812  FTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYK 871

Query: 300  MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            +   G +    TY   +DGL K+G I +A +LF  +    C+ +   YN L++G   +G 
Sbjct: 872  LMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGN 931

Query: 360  LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
             E   ELF+++    + P++ +Y+++IG LC  G+++ +   F  + E  + P++IT+++
Sbjct: 932  TEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNL 991

Query: 420  LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
            LI G  R     + + L + M++  + P+    + ++  L K
Sbjct: 992  LIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGK 1033



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 212/451 (47%), Gaps = 48/451 (10%)

Query: 35  AESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS---HTIVALNLFEEMANGNGEF 91
           A  R+ + A +F  ++    + +V T+ T+   L          VAL + +E        
Sbjct: 124 AHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEA------- 176

Query: 92  GVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
           G+V   N+ TY  +I  L K G+  +A E+   M    I P+V TY+ ++  F   +D  
Sbjct: 177 GIVL--NSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFG-KRDVE 233

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
               L  EM D GV+PNV ++ + +  L + G+ +EA ++L  M   G +PD  T   L+
Sbjct: 234 TVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLI 293

Query: 212 DGFCLTGRVNHAKELFVSMESM-----------------------------------GCK 236
              C  GRV+ AK++F  M++                                    G  
Sbjct: 294 QILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYN 353

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V +Y+ +++  C+   ++ A  ++ +M  KGI+P    +N+L  G  +  ++  A +L
Sbjct: 354 DNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALEL 413

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
           F+ M  +G   + +TY  FI+   K+G  ++A++ +  ++      D+ A N+++  L K
Sbjct: 414 FNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAK 473

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           SGRL +A  +F  L    + P+ +TY++MI         D+A  +F +M E   VP+V+ 
Sbjct: 474 SGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLA 533

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
            + LI    +    ++  ++ H++KE+N+ P
Sbjct: 534 VNSLIDTLYKAGRGNEAWKIFHELKEMNLDP 564



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 212/454 (46%), Gaps = 33/454 (7%)

Query: 2    GRVSHGFVVLGRI-LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            G V++   +L  + +K C  PD  ++ + + GL  E R+ EA  +F +++     PD  T
Sbjct: 615  GEVNYALGMLYNMTMKGCM-PDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTT 672

Query: 61   YTTLV-----NGLCRTS-HTIVALNLFEEMANGNGEFGVVCE--------PNTVTY---- 102
              T++     NGL   + HT+    L          F  + E          ++ +    
Sbjct: 673  LCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENI 732

Query: 103  ------------TTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDW 150
                        + +I  LCK     +A EL+ + +   +     +Y ++I G       
Sbjct: 733  ALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLI 792

Query: 151  NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
            + A+ LF EM   G  P+  T+N+I+D + K+ ++++  ++   M   G      TYNT+
Sbjct: 793  DVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTI 852

Query: 211  LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
            + G   +  +  A +L+  + S G   T  +Y  L++G  K+ +IE A  L+ EML  G 
Sbjct: 853  ISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGC 912

Query: 271  KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
            KP+  I+N L  G       E+  +LF  M   G+  D  +Y   I  LC  G + +++ 
Sbjct: 913  KPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLS 972

Query: 331  LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
             F  L  L  E D+  YN LI GL +SGRLE A+ LF  +    + PN+ TY+ +I  L 
Sbjct: 973  YFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLG 1032

Query: 391  NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
             +G+  +A  ++ ++ +N   PNV T++ LI G+
Sbjct: 1033 KEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGY 1066



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 184/404 (45%), Gaps = 6/404 (1%)

Query: 14   ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
            IL+     D  +F SL++G+   + + ++      + +     D F  + L+  LC++  
Sbjct: 697  ILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKK 756

Query: 74   TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
             + A  L ++  +     GV  +  T +Y  +I GL  E  +D A+ L  +MK     P+
Sbjct: 757  ALEAHELVKKFES----LGVSLK--TGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPD 810

Query: 134  VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
              TY  ++     +    +  ++  EM  +G +   VT+N I+  L K+  + EA  L  
Sbjct: 811  EFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYY 870

Query: 194  LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
             ++  G  P   TY  LLDG    G++  A++LF  M   GCK     Y+IL+NGY    
Sbjct: 871  KLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAG 930

Query: 254  EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
              E    L+  M+ +GI PD+  +  L   L    ++  +   F ++   G+  D  TY 
Sbjct: 931  NTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYN 990

Query: 314  TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
              I GL ++G + EAV LF+ +       ++  YNSLI  L K G+   A +++  L   
Sbjct: 991  LLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKN 1050

Query: 374  VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
               PNV TY+ +IGG    G  D A   +  M      PN  T+
Sbjct: 1051 GWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 159/324 (49%), Gaps = 1/324 (0%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           ++F  M  Q V+ NV TF  I   L   G +  A   L +M + G+  +++TYN L+   
Sbjct: 133 QVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFL 192

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
             +G    A E++  M + G   +V +YS+L+  + K +++E  + L  EM   G+KP+V
Sbjct: 193 VKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNV 251

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             +      L +  + E A+K+  +M+  G   D  T    I  LC  G + +A ++F  
Sbjct: 252 YSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWK 311

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           ++    + D   Y +L+D    +G     +E++ ++       NVV Y+ ++  LC  G+
Sbjct: 312 MKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGR 371

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +D+A D+F  M++  + P   +++ LI GF++ +  +  +EL + M      P+     +
Sbjct: 372 VDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVL 431

Query: 455 VVDLLAKNEISLNSLPSFTVHEQQ 478
            ++   K+  SL ++  + + + +
Sbjct: 432 FINYYGKSGESLKAIKRYELMKSK 455



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 6/235 (2%)

Query: 13   RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
            +++   F+P   T+  L+ GL  + +I +A  LF ++  +GC+P+   Y  L+NG     
Sbjct: 871  KLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAG 930

Query: 73   HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
            +T     LF+ M +          P+  +YT +I  LC  G ++ +     Q+ +  ++P
Sbjct: 931  NTEKVCELFQNMVDQG------INPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEP 984

Query: 133  NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
            +++TY  +I G   +    EA  LF +M   G+ PN+ T+N ++  L K GK  EA ++ 
Sbjct: 985  DLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMY 1044

Query: 193  DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
            + ++++G +P+ FTYN L+ G+ ++G  ++A   +  M   GC     +Y  L N
Sbjct: 1045 EELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPN 1099



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 16/184 (8%)

Query: 6    HGFVVLGRILKSC----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
            +G+ + G   K C            PD  ++T LI  LC   R+ ++ + F +L   G E
Sbjct: 924  NGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLE 983

Query: 56   PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
            PD+ TY  L++GL R+     A++LF +M       G+   PN  TY ++I  L KEG  
Sbjct: 984  PDLITYNLLIHGLGRSGRLEEAVSLFNDMEKS----GIA--PNLYTYNSLILYLGKEGKA 1037

Query: 116  DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
             +A ++  ++     KPNV TY ++I G+  +   + A   + +M+  G  PN  T+  +
Sbjct: 1038 AEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097

Query: 176  MDEL 179
             ++L
Sbjct: 1098 PNQL 1101



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            GR++       ++ +    PD +T+  LI GL    R+ EA +LF  +   G  P+++TY
Sbjct: 965  GRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTY 1024

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +L+  L +      A  ++EE+   NG      +PN  TY  +I G    G  D A   
Sbjct: 1025 NSLILYLGKEGKAAEAGKMYEELLK-NG-----WKPNVFTYNALIGGYSVSGSTDNAFAS 1078

Query: 122  LLQMKDKNIKPNVVTY 137
              QM      PN  TY
Sbjct: 1079 YGQMIVGGCPPNSSTY 1094


>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 621

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 226/458 (49%), Gaps = 19/458 (4%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
           SH  +  G    SC T  A   T L+  L  + +  EA A+F  L   G +P + TYTTL
Sbjct: 46  SHCLICRGN--NSCQTVHA--RTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTL 101

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           V  L R         L  ++A+ NG      +P+++    +I+     G VD+A ++  +
Sbjct: 102 VAALTRQKRFKSIPALLSKVAD-NG-----MKPDSILLNAMINAFSDSGKVDEAMKIFQK 155

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM--DQGVQPNVVTFNVIMDELCKN 182
           MK+   KP   TY ++I+GF       E+ +L +EMM  D+ V+PN  T+N+++   C  
Sbjct: 156 MKEYGCKPTTSTYNTLIKGFGIVGRPYESMKL-LEMMGQDENVKPNDRTYNILIQAWCTK 214

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K++EA  +L  M+  G++PD  TYNT+   +   G    A+ L + M+    K    + 
Sbjct: 215 KKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTC 274

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF---EIHQVERAFKLFDE 299
            I+I+GYCK   +  AL     M   G+ P+ V+ N+L  G     + + V+ A  L +E
Sbjct: 275 GIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEE 334

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
               G+  D  T+ T ++     G +    E+F+ +     E DI AY+ L  G  ++G+
Sbjct: 335 F---GIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQ 391

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
              A  L  S+    +  NVV ++ +I G C  G+MD+A  L   M E    PN+ T++ 
Sbjct: 392 PRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYET 451

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           LI G+    +P K  E+L  M+E  V+P+ S + +V D
Sbjct: 452 LIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVAD 489



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 204/430 (47%), Gaps = 13/430 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      V   + +    P  +T+T+L+  L  + R     AL +K+   G +PD    
Sbjct: 74  GKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILL 133

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N    +     A+ +F++M     E+G  C+P T TY T+I G    G   ++ +L
Sbjct: 134 NAMINAFSDSGKVDEAMKIFQKMK----EYG--CKPTTSTYNTLIKGFGIVGRPYESMKL 187

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  M +D+N+KPN  TY  +I+ +C  K   EA  +  +M+  G+QP+VVT+N +     
Sbjct: 188 LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYA 247

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +NG+ ++A RL+  M  + V+P+  T   ++ G+C  G +  A      M+ +G      
Sbjct: 248 QNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPV 307

Query: 241 SYSILINGYCKNKEIEG---ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
            ++ LI GY    +  G   AL+L  E    GIKPDVV  +T+         ++   ++F
Sbjct: 308 VFNSLIKGYLDATDTNGVDEALTLMEEF---GIKPDVVTFSTIMNAWSSAGLMDNCEEIF 364

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
           ++M + G+  D   Y     G  + G   +A  L  ++     + ++  + ++I G C +
Sbjct: 365 NDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAA 424

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           G+++ A  L   +      PN+ TY  +I G     Q  KA ++   MEE  VVP + T 
Sbjct: 425 GKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTM 484

Query: 418 DMLIRGFIRI 427
            ++   +  I
Sbjct: 485 QLVADAWRAI 494


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 220/400 (55%), Gaps = 11/400 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN--GLCRTSHTIVALNLFEE 83
           FT++IK    ++++ EA  L  K++ F C PD  +Y T+++   LCR+  T  +++   E
Sbjct: 196 FTNVIK-FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNE 254

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           +     E G+V  P+ +TY TII G C+EG V+KA +   +M +K+ KP++ T   ++RG
Sbjct: 255 LL----ESGLV--PHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRG 308

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
            C     + A +LF   + +G   + VT+N I+  LCK G+ +EA  LL  M +  + PD
Sbjct: 309 LCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD 368

Query: 204 AFTYNTLLDGFC-LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
            +TYN +L       G+V  A +    M     K  +F+ +IL+ G C    ++ AL L+
Sbjct: 369 CYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLF 428

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYRTFIDGLCK 321
           +  +SKG   D V +NT+  GL +  + E AF L  EM ++NG+  D  TY T I G C+
Sbjct: 429 NTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCR 488

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + +A +  + +     + D+   N L+ GLC+ G L  AL+LF +        + VT
Sbjct: 489 EGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVT 548

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           Y+ +I GLC +G+ ++A DL  +M+E  + P+  T++ ++
Sbjct: 549 YNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAIL 588



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 182/362 (50%), Gaps = 8/362 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+       L  +L+S   P  +T+ ++I G C E ++ +A     K+     +PD+FT 
Sbjct: 243 GKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTC 302

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLC       AL LF    +           + VTY TII GLCKEG  ++A +L
Sbjct: 303 NILLRGLCTEGMLDNALKLFNTWISKGKAI------DAVTYNTIISGLCKEGRFEEAFDL 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFI-EMMDQGVQPNVVTFNVIMDELC 180
           L +M++K + P+  TY +++     A+   E    F  +M+++  +P++ T N+++  LC
Sbjct: 357 LAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLC 416

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM-GCKHTV 239
             G +D A +L +  I  G   DA TYNT++ G C  GR   A +L   ME   G     
Sbjct: 417 TEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQ 476

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +I GYC+  ++E A    ++M+ K  KPD+   N L  GL     + +A KLF+ 
Sbjct: 477 TTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNT 536

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
               G A D  TY T I GLCK G   EA +L   ++  K   D   YN+++  L  +GR
Sbjct: 537 WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGR 596

Query: 360 LE 361
           +E
Sbjct: 597 ME 598



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 214/444 (48%), Gaps = 20/444 (4%)

Query: 37  SRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH------------TIVALNLFEEM 84
           +R   AA +F +++    +P++ T  TL+N L R                ++   +  ++
Sbjct: 149 NRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKL 208

Query: 85  ANGNGEFGVV----CEPNTVTYTTIID--GLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
           +   G  G +    C P+  +Y TI+D   LC+ G  D++ + L ++ +  + P+ +TY 
Sbjct: 209 SEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYN 268

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           ++I G+C      +A +   +M+++  +P++ T N+++  LC  G +D A +L +  I  
Sbjct: 269 TIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISK 328

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK-EIEG 257
           G   DA TYNT++ G C  GR   A +L   ME        ++Y+ ++      + ++E 
Sbjct: 329 GKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEK 388

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A    ++M+ K  KPD+   N L  GL     ++ A KLF+     G A D  TY T I 
Sbjct: 389 AFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIIS 448

Query: 318 GLCKNGYIVEAVELFHTLRILKCEF-DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           GLCK G   EA +L   +        D   YN++I G C+ G++E A +    +      
Sbjct: 449 GLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFK 508

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P++ T +I++ GLC +G + KA  LF          + +T++ +I G  +     +  +L
Sbjct: 509 PDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDL 568

Query: 437 LHKMKEINVMPDASIVSIVVDLLA 460
           L +MKE  + PD    + ++  LA
Sbjct: 569 LAEMKEKKLGPDCYTYNAILCALA 592



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 193/381 (50%), Gaps = 26/381 (6%)

Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGF---------CYAK-------------DWNEAKR 155
           A ++  +MK  ++KPN++T  ++I            C +K               +EA  
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIG 213

Query: 156 LFIEMMDQGVQPNVVTFNVIMD--ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           L  +M D    P+  ++N I+D   LC++GK D++   L+ +++ G+ P   TYNT++ G
Sbjct: 214 LIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 273

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +C  G+V  A +    M     K  +F+ +IL+ G C    ++ AL L++  +SKG   D
Sbjct: 274 YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 333

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC-KNGYIVEAVELF 332
            V +NT+  GL +  + E AF L  EM+   +  D +TY   +  L    G + +A +  
Sbjct: 334 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFR 393

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
           + +     + D+   N L+ GLC  G L+ AL+LF +        + VTY+ +I GLC +
Sbjct: 394 NKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKE 453

Query: 393 GQMDKARDLFLDMEE-NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
           G+ ++A DL  +MEE N +VP+  T++ +I G+ R  +  K  +  +KM E +  PD   
Sbjct: 454 GRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFT 513

Query: 452 VSIVVDLLAKNEISLNSLPSF 472
            +I++  L +  + + +L  F
Sbjct: 514 CNILLRGLCREGMLVKALKLF 534



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 133/290 (45%), Gaps = 25/290 (8%)

Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING---YCKNKEIEGALSLYSE 264
           +T +  +    R +HA ++F  M+ +  K  + + + LIN    Y     +  + ++++ 
Sbjct: 139 DTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTN 198

Query: 265 MLSKGIK-------------------PDVVIHNTLF--VGLFEIHQVERAFKLFDEMQRN 303
           ++  G+K                   PD   +NT+   + L    + +++    +E+  +
Sbjct: 199 VIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLES 258

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+     TY T I G C+ G + +A +  + +     + D+   N L+ GLC  G L+ A
Sbjct: 259 GLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNA 318

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L+LF +        + VTY+ +I GLC +G+ ++A DL  +MEE  + P+  T++ ++  
Sbjct: 319 LKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCA 378

Query: 424 FIRIN-EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
                 +  K  +  +KM E +  PD    +I++  L    +  N+L  F
Sbjct: 379 LADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLF 428


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/367 (34%), Positives = 185/367 (50%), Gaps = 10/367 (2%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D +TY  LV   C       A++L  EM    G       P    Y   +  LCK G V 
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGM-----APTPSMYNFFVHALCKSGKVP 71

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A E++  MKD   KP+VVT+ ++I G C A   +EA+++  EM   G   N+VT+N ++
Sbjct: 72  EAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLI 131

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGC 235
           + L   G+  EA  ++  M      PD  TYN ++ GFC +G ++ A      M +  GC
Sbjct: 132 NGLSSAGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGC 188

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIHNTLFVGLFEIHQVERAF 294
               F+YSILING CK+  +  A  L  EM+  K     VV  NTL  G  +   ++RA 
Sbjct: 189 SPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAR 248

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +L   M  +G A D  TY T IDGLC+ G + +   L   +    C+ D+  Y  L+ GL
Sbjct: 249 ELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGL 308

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK+G++  A  L + +      PN VTYS++  GLC   ++D A DL   + +   V +V
Sbjct: 309 CKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDV 368

Query: 415 ITFDMLI 421
           + F+ L+
Sbjct: 369 VAFETLL 375



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 189/368 (51%), Gaps = 12/368 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           D  T+  L++  C    +  A  L  ++ +  G  P    Y   V+ LC++     A+ +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M +G       C+P+ VT+ T+I GLCK G +D+A+++L +M+      N+VTY ++
Sbjct: 77  VKNMKDG------ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTL 130

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH-G 199
           I G   A    EA    + M      P+  T+N I+   CK+G++D A   L+ M Q  G
Sbjct: 131 INGLSSAGRSGEA---VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG 187

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGA 258
             PD FTY+ L++G C +  +  A EL   M     C  +V +++ L++GYCK ++++ A
Sbjct: 188 CSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L S ML  G  PDVV ++T+  GL     V++ F L ++M   G   D  TY   + G
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTG 307

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G +VEA  L   +    C  +   Y+ + DGLCK  +L++A +L  S+     V +
Sbjct: 308 LCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTD 367

Query: 379 VVTYSIMI 386
           VV +  ++
Sbjct: 368 VVAFETLL 375



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 160/317 (50%), Gaps = 11/317 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     V+  +      PD VTF +LI GLC   R+ EA  +  ++   G   ++ TY
Sbjct: 68  GKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTY 127

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NGL     +  A+ + +         G+   P+T TY  II G CK G +D+A   
Sbjct: 128 NTLINGLSSAGRSGEAVLVMQ---------GMTTTPDTQTYNAIIHGFCKSGEIDRAYGF 178

Query: 122 LLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDEL 179
           L +MK +    P+  TY+ +I G C + +  +A  L  EM+  +    +VV FN ++D  
Sbjct: 179 LEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGY 238

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK   +D A  LL  M++HG  PD  TY+T++DG C  G V+    L   M S GCK  V
Sbjct: 239 CKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDV 298

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y++L+ G CK  ++  A  L   ML  G  P+ V ++ +F GL +I +++ A  L   
Sbjct: 299 VTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTS 358

Query: 300 MQRNGVAADTWTYRTFI 316
           ++  G   D   + T +
Sbjct: 359 IRDKGRVTDVVAFETLL 375



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 6/329 (1%)

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           TY  ++R  C A +   A  L  EM  Q G+ P    +N  +  LCK+GK+ EA  ++  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M     +PD  T+NTL+ G C  GR++ A+++   ME  G    + +Y+ LING      
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYR 313
              A+ +   M +    PD   +N +  G  +  +++RA+   +EM QR G + DT+TY 
Sbjct: 140 SGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
             I+GLCK+  + +A EL   +   K C   + A+N+L+DG CK+  L+ A EL  S+  
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               P+VVTYS +I GLC  G +DK   L   M      P+V+T+ +L+ G  +  +  +
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAK 461
              L+ +M E    P+A   S+V D L K
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 178/351 (50%), Gaps = 6/351 (1%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           TY  ++   C  G +  A +LL +M+ +  + P    Y   +   C +    EA  +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M D   +P+VVTFN ++  LCK G++DEA ++LD M + G   +  TYNTL++G    GR
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHN 278
              + E  + M+ M       +Y+ +I+G+CK+ EI+ A     EM  + G  PD   ++
Sbjct: 140 ---SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 279 TLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
            L  GL +   + +A +L  EM  R    A    + T +DG CK   +  A EL  ++  
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
             C  D+  Y+++IDGLC+ G ++    L   +      P+VVTY++++ GLC  G+M +
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           A  L   M E+   PN +T+ ++  G  +I++     +LL  +++   + D
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTD 367



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 150/284 (52%), Gaps = 9/284 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL  + +S F  + VT+ +LI GL +  R  EA  +   +      PD  TY
Sbjct: 103 GRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTY 159

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C++     A    EEM    G     C P+T TY+ +I+GLCK   + KA EL
Sbjct: 160 NAIIHGFCKSGEIDRAYGFLEEMKQRAG-----CSPDTFTYSILINGLCKSSNLRKADEL 214

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L +M   K+   +VV + +++ G+C A+D + A+ L   M++ G  P+VVT++ I+D LC
Sbjct: 215 LQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLC 274

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G +D+   LL+ M+  G +PD  TY  L+ G C  G++  A  L   M   GC     
Sbjct: 275 RCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +YS++ +G CK  +++ A  L + +  KG   DVV   TL + +
Sbjct: 335 TYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSV 378


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 223/418 (53%), Gaps = 12/418 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+  + V  +++     P+ VT+T++I  LC E  I +A  LF +++  G  P+++TY
Sbjct: 187 GDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTY 246

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++   +  +   AL  + ++     + G+V  PN V +TT+IDGLC+   + +AK +
Sbjct: 247 NALMSSHFKRDNIKHALVFYYDLL----KCGLV--PNDVIFTTLIDGLCQANRITEAKNI 300

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L M    + P V  Y S+I G   +    EA   F E++ +G++P+  T ++++  LC 
Sbjct: 301 FLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCD 360

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+M  A+R L++M Q G+  +A  YN L+D +C +G ++ A      M  +G +  V +
Sbjct: 361 GGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVT 420

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI+G+ KN E+E A+++Y+EM++KG++P+VV +  L  G  +   ++ AF L  EM+
Sbjct: 421 YSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEME 480

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE------FDIRAYNSLIDGLC 355
             G+ ++  T    +DGLC+   + +AV         K         +   Y +LI GL 
Sbjct: 481 EKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLY 540

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
             G+   A   F  +    +VP+  TY+++I GLC  G +  A  L+ DM +  V P 
Sbjct: 541 IDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 208/397 (52%), Gaps = 9/397 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           EA ++F +LR     P +     +++GL +         LF+EM       G    P+ V
Sbjct: 124 EALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEM------LGRGMVPSVV 174

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY T+I+    +G V KA E+  QM  + I PNVVTYT++I   C      +A+ LF+EM
Sbjct: 175 TYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEM 234

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            + G++PN+ T+N +M    K   +  A      +++ G+ P+   + TL+DG C   R+
Sbjct: 235 KEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRI 294

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             AK +F+ M       TV  Y+ LI+G  ++   + AL+ + E++ KG++PD    + +
Sbjct: 295 TEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIV 354

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +  Q++ A +  + MQ++G+A +   Y   ID  CK+G + EA+     +  +  
Sbjct: 355 VRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGV 414

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           E ++  Y+SLIDG  K+G +EIA+ ++  +    + PNVVTY+ +I G   +G MD A  
Sbjct: 415 EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFW 474

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           L  +MEE  +  N IT  +L+ G  R N     +  +
Sbjct: 475 LQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFI 511



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 183/372 (49%), Gaps = 1/372 (0%)

Query: 91  FGVVCE-PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
           FG + E P       I+DGL K   + +  EL  +M  + + P+VVTY ++I    +  D
Sbjct: 129 FGRLRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGD 188

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
             +A  ++ +M+ + + PNVVT+  ++  LC+   + +A  L   M + G+RP+ +TYN 
Sbjct: 189 VAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNA 248

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           L+        + HA   +  +   G       ++ LI+G C+   I  A +++ +M    
Sbjct: 249 LMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYE 308

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           + P V ++N+L  G F     + A   F E+ R G+  D +T    + GLC  G +  A 
Sbjct: 309 VAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVAT 368

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
                ++      +  AYN LID  CKSG L+ AL     +    + PNVVTYS +I G 
Sbjct: 369 RFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGH 428

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
             +G+M+ A  ++ +M    V PNV+T+  LI G  +  +      L  +M+E  +  +A
Sbjct: 429 SKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNA 488

Query: 450 SIVSIVVDLLAK 461
             VS++VD L +
Sbjct: 489 ITVSVLVDGLCR 500



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 142/296 (47%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P +   N I+D L K   +     L D M+  G+ P   TYNTL++     G V  A E+
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           +  M +      V +Y+ +I   C+   I  A  L+ EM   G++P++  +N L    F+
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              ++ A   + ++ + G+  +   + T IDGLC+   I EA  +F  +   +    +  
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           YNSLI G  +SG  + AL  F+ +    L P+  T SI++ GLC+ GQM  A      M+
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++ +  N   +++LI  + +     + +    +M E+ V P+    S ++D  +KN
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKN 431


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 213/452 (47%), Gaps = 52/452 (11%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T+ +L+KGLC E +I EA  +  ++      PDV TY TL++G  +   +     L 
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           EEM +  G      EPN VT+  ++    KEG +++A + +++M +  + P+  TY ++I
Sbjct: 196 EEMKSRGG-----VEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMI 250

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC--------------------- 180
            GFC A    EA R+  EM  +G++P++ T N ++  LC                     
Sbjct: 251 NGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYI 310

Query: 181 --------------KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
                         K  + D+A +L + M + G+ P   +YN L+ G CL+G+ + A + 
Sbjct: 311 LDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDK 370

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
              +   G      S +I+I+GYC    ++ A   +++M+    KPD+   N L  GL  
Sbjct: 371 LNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCR 430

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
           +  +E+AFKLF+       + D  TY T I  LCK G + EA +L   + + K E D   
Sbjct: 431 VDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYT 490

Query: 347 YNSLIDGLCKSGRLEIALELFRSLP-CGVLV-----------PNVVTYSIMIGGLCNDGQ 394
           YN+++  L  +GR E A +    L   G  V            + + YS  I  LC  G+
Sbjct: 491 YNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGK 550

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
             +A  LF + E+  V  N  T+  L+ GF++
Sbjct: 551 YKEAMKLFQESEQKGVSLNKYTYIKLMDGFLK 582



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 198/387 (51%), Gaps = 7/387 (1%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           DV+TY TLV GLC       A+ + +EM +      +   P+ VTY T+IDG  K     
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMES------LKLIPDVVTYNTLIDGCFKWRGST 189

Query: 117 KAKELLLQMKDKN-IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           +   LL +MK +  ++PN VT+  +++ F      NEA    ++M++ GV P+  T+N +
Sbjct: 190 EGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTM 249

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           ++  CK GK+ EA R++D M + G++PD  T NT+L   C+  +   A EL V     G 
Sbjct: 250 INGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGY 309

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
                +Y  LI GY K K+ + AL L+ EM  +GI P VV +N L  GL    + ++A  
Sbjct: 310 ILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVD 369

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
             +E+   G+  D  +    I G C  G + +A +  + +     + DI   N L+ GLC
Sbjct: 370 KLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLC 429

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           +   LE A +LF S        +VVTY+ MI  LC +G++D+A DL  DME     P+  
Sbjct: 430 RVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQY 489

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKE 442
           T++ ++R         +  + + K+ E
Sbjct: 490 TYNAIVRALTHAGRTEEAEKFMSKLSE 516



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 167/378 (44%), Gaps = 43/378 (11%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+AVT   ++K    E +I EA+    K+   G  PD FTY T++NG C+      A  +
Sbjct: 206 PNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRM 265

Query: 81  FEEMANGNGEFGVVCEPNT------------------------------VTYTTIIDGLC 110
            +EMA   G    +C  NT                              VTY T+I G  
Sbjct: 266 MDEMAR-KGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYF 324

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K    DKA +L  +MK + I P+VV+Y  +IRG C +   ++A     E++++G+ P+ V
Sbjct: 325 KGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEV 384

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           + N+I+   C  G +D+A +  + M+ +  +PD FT N LL G C    +  A +LF S 
Sbjct: 385 SCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSW 444

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
            S      V +Y+ +I+  CK   ++ A  L ++M  K  +PD   +N +   L    + 
Sbjct: 445 ISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRT 504

Query: 291 ERAFKLFDEMQRNGVAADTWT------------YRTFIDGLCKNGYIVEAVELFHTLRIL 338
           E A K   ++   G A  T              Y   I  LC  G   EA++LF      
Sbjct: 505 EEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQK 564

Query: 339 KCEFDIRAYNSLIDGLCK 356
               +   Y  L+DG  K
Sbjct: 565 GVSLNKYTYIKLMDGFLK 582



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           D +TYNTL+ G C  G+++ A  +   MES+     V +Y+ LI+G  K +       L 
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 263 SEMLSKG-IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
            EM S+G ++P+ V HN +     +  ++  A     +M  +GV+ D +TY T I+G CK
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
            G + EA  +   +     + DI   N+++  LC   + E A EL         + + VT
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
           Y  +I G     Q DKA  L+ +M++  +VP+V++++ LIRG     +  + ++ L+++ 
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 442 EINVMPDASIVSIVV 456
           E  ++PD    +I++
Sbjct: 376 EKGLVPDEVSCNIII 390



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 4/186 (2%)

Query: 278 NTLFVGLFEIHQVERAFKLFDE---MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           +T        +Q   AF+LF           + D WTY T + GLC  G I EA+ +   
Sbjct: 103 DTSLAAYVHANQPHLAFQLFQNELIXXXXXXSIDVWTYNTLVKGLCDEGKIDEAIRVRDE 162

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDG 393
           +  LK   D+  YN+LIDG  K         L   +   G + PN VT++IM+     +G
Sbjct: 163 MESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEG 222

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
           ++++A D  + M E+ V P+  T++ +I GF +  +  +   ++ +M    + PD   ++
Sbjct: 223 KINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLN 282

Query: 454 IVVDLL 459
            ++  L
Sbjct: 283 TMLHTL 288



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 86/230 (37%), Gaps = 53/230 (23%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+       L  +L+    PD V+   +I G C E  + +A     K+     +PD+FT 
Sbjct: 362 GKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTR 421

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLCR      A  LF    +      VV      TY T+I  LCKEG +D+A +L
Sbjct: 422 NILLRGLCRVDMLEKAFKLFNSWISKQNSVDVV------TYNTMISYLCKEGRLDEAFDL 475

Query: 122 LLQMKDKNIKPNVVTYTSVIRGF------------------------------------- 144
           +  M+ K  +P+  TY +++R                                       
Sbjct: 476 MTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSD 535

Query: 145 ----------CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
                     C    + EA +LF E   +GV  N  T+  +MD   K  K
Sbjct: 536 IMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRK 585


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 227/453 (50%), Gaps = 6/453 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V   +  L  + +  +  ++  F ++I G C + ++ +A  +F  ++  G  PDV +Y+
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYS 322

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LV+GLC+    +    +  EMA  NG       PN V+Y++++ GLC+ G V+ A EL 
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMAR-NG-----ITPNLVSYSSLLHGLCRAGRVELAFELF 376

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            ++KD+  K + + Y+ V+ G C   D      L+ +M+     P+   ++ ++   C++
Sbjct: 377 KRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRH 436

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            ++ EA  + +LMI  G+ P+  T   L+ GF   G +  A      +   G    + +Y
Sbjct: 437 RQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTY 496

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
            ++ING CK  +      ++++M+ +G  PD V+++ +  G  +   ++ AF+L+ +M  
Sbjct: 497 RVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVD 556

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G   + +TY + I+GLC +  + E + LF  +       D   Y SLI   CK   ++ 
Sbjct: 557 EGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKA 616

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           ALE+FR +    L  +   Y+ +IGG      MD A+    +M    + P V+T+  LI 
Sbjct: 617 ALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLII 676

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
           G+ +I +  K + + + M +  + PDA +  I+
Sbjct: 677 GYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL 709



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 211/434 (48%), Gaps = 4/434 (0%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+KGL   ++IM   +LF  +++ G  P++++Y+ L++    T    + L   +E+ +  
Sbjct: 182 LLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMY--THGAKLCLEEAQELLSEM 239

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
              GV   PN  TY T + GLC+   V  A   L  +  +    N   + +VI GFC+  
Sbjct: 240 EVEGV--RPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDG 297

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
             ++A  +F  M   G  P+V ++++++D LCK G +     +L  M ++G+ P+  +Y+
Sbjct: 298 QVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYS 357

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           +LL G C  GRV  A ELF  ++  G KH    YSI+++G C++ ++E    L+++M+  
Sbjct: 358 SLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHH 417

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
              PD   +++L        Q++ A ++F+ M  +G+  +  T    + G    G I EA
Sbjct: 418 NFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEA 477

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
                 +R      ++  Y  +I+GLCK  +      +F  +     VP+ V YSI+I G
Sbjct: 478 FLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDG 537

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
                 + +A  L+  M +    PN+ T+  LI G    ++  +V+ L   M    + PD
Sbjct: 538 FVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPD 597

Query: 449 ASIVSIVVDLLAKN 462
             + + ++    K 
Sbjct: 598 RILYTSLIACYCKR 611



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 207/408 (50%), Gaps = 18/408 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G+ +L  + ++  TP+ V+++SL+ GLC   R+  A  LF +L+  G + D   Y
Sbjct: 332 GDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVY 391

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + +++G C+     +  +L+ +M + N        P+   Y+++I   C+   + +A E+
Sbjct: 392 SIVLHGCCQHLDLEICYDLWNDMVHHN------FVPDAYNYSSLIYAYCRHRQLKEALEV 445

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELC 180
              M    I PNVVT T ++ GF       EA  LF++ + Q GV PN+ T+ VI++ LC
Sbjct: 446 FELMICDGICPNVVTCTILVHGFSNEGLIGEA-FLFLDKVRQFGVVPNLCTYRVIINGLC 504

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  K ++   +   MI+ G  PD   Y+ ++DGF     +  A  L+  M   G K  +F
Sbjct: 505 KVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIF 564

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LING C + ++   ++L+  M+ +G+ PD +++ +L     +   ++ A ++F EM
Sbjct: 565 TYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREM 624

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGR 359
           +  G++AD++ Y   I G  K    ++  +LF    + K     +  Y  LI G  K G 
Sbjct: 625 ETEGLSADSFVYTCLIGGFSKV-LAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGD 683

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
            + A+ ++ S+    + P+     I+  GL NDG      D F D +E
Sbjct: 684 EKKAMVMYNSMLQAGIAPDAKLSCIL--GLGNDG------DDFADSQE 723



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 190/398 (47%), Gaps = 41/398 (10%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y T+I    +    + A    ++ K   ++  V  +  +++G          + LF +M 
Sbjct: 146 YATVIRVFVELSMFEDALVTYVEAKKVGVELQVCNF--LLKGLVEGNQIMYVRSLFDDMK 203

Query: 162 DQGVQPNVVTFNVIMDELCKNGK--MDEASRLLDLMIQHGVRPDAFTY------------ 207
             G  PN+ +++V+M       K  ++EA  LL  M   GVRP+A TY            
Sbjct: 204 ISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQ 263

Query: 208 -----------------------NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
                                  N ++ GFC  G+V+ A E+F  M+  G    V SYSI
Sbjct: 264 VKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSI 323

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L++G CK  ++     +  EM   GI P++V +++L  GL    +VE AF+LF  ++  G
Sbjct: 324 LVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQG 383

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
              D   Y   + G C++  +    +L++ +       D   Y+SLI   C+  +L+ AL
Sbjct: 384 FKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEAL 443

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD-MEENAVVPNVITFDMLIRG 423
           E+F  + C  + PNVVT +I++ G  N+G + +A  LFLD + +  VVPN+ T+ ++I G
Sbjct: 444 EVFELMICDGICPNVVTCTILVHGFSNEGLIGEAF-LFLDKVRQFGVVPNLCTYRVIING 502

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
             ++N+P+ V  +   M +   +PD  + SI++D   K
Sbjct: 503 LCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVK 540


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/412 (31%), Positives = 216/412 (52%), Gaps = 11/412 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV    +     +K+ F PD V++ +L+ G      + +A ALF +++  G    + ++ 
Sbjct: 117 RVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHN 175

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            ++ GLC      +A  +F++M+        +  PN ++YT +IDGLCK   VDKA  L 
Sbjct: 176 IVLRGLCSGGKISMAWEVFKDMSG-------IFSPNLISYTIMIDGLCKSRKVDKAITLF 228

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            QM DK I P+VVTY ++I G    +   EA  LF E   +G  P VVT+N ++D LCK 
Sbjct: 229 KQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKC 288

Query: 183 GKMDEASRLLDLMIQHG-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           G+++ A  L D M++   ++PD FTY+ L++G  L+ R   A EL+  M   GC   V +
Sbjct: 289 GRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVT 348

Query: 242 YSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           Y+ L++G CK+   + A+ ++ +M +     P+V+ +  L     ++ ++  A KL  EM
Sbjct: 349 YNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEM 408

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +   +  D  T+ T I  LCK   I EA ELF ++    C+ D   +N+++ G CK  R+
Sbjct: 409 EGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG-KTCKPDSVLFNTMLAGYCKITRI 467

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           + A +L   +      P + TY+ ++ G C  G+   A  ++ +M E    P
Sbjct: 468 DDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 207/366 (56%), Gaps = 7/366 (1%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           V EP+ V+Y T+++G  K G V KA  L  +MKD  I   + ++  V+RG C     + A
Sbjct: 132 VFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCSGGKISMA 190

Query: 154 KRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
             +F +M   G+  PN++++ +++D LCK+ K+D+A  L   M+   + PD  TY  L+D
Sbjct: 191 WEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALID 248

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IK 271
           G     RV  A +LF    + GC  TV +Y+ +I+G CK   IE AL+LY +M+ +  +K
Sbjct: 249 GLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLK 308

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
           PD+  ++ L  GL   ++ E+A++L++EM   G + D  TY T +DGLCK+G   +A+E+
Sbjct: 309 PDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368

Query: 332 FHTLRILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           F  + +   C+ ++  Y  LID  CK  RL  A++L + +    L+P+ VT++ +I  LC
Sbjct: 369 FRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLC 428

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
            + ++D+A +LF  + +    P+ + F+ ++ G+ +I       +L  +M +    P  +
Sbjct: 429 KESRIDEAHELFESIGKTC-KPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLA 487

Query: 451 IVSIVV 456
             + +V
Sbjct: 488 TYTALV 493



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 32/302 (10%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V     +  +++     PD VT+ +LI GL  + R+ EA  LF + R  GC P V TY 
Sbjct: 220 KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYN 279

Query: 63  TLVNGLCRTSHTIVALNLFEEMA----------------NG-----NGE---------FG 92
           T+++GLC+      AL L+++M                 NG      GE           
Sbjct: 280 TMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLD 339

Query: 93  VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI-KPNVVTYTSVIRGFCYAKDWN 151
             C P+ VTY T++DGLCK G  DKA E+  +M   N+  PNV+TYT +I  FC      
Sbjct: 340 TGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLG 399

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
           +A +L  EM  + + P+ VTF  ++ +LCK  ++DEA  L +  I    +PD+  +NT+L
Sbjct: 400 DAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFE-SIGKTCKPDSVLFNTML 458

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G+C   R++ AK+L   M   GC  T+ +Y+ L+ G+C+      AL +Y EM+  G  
Sbjct: 459 AGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFP 518

Query: 272 PD 273
           P+
Sbjct: 519 PE 520



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 183/338 (54%), Gaps = 4/338 (1%)

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           K      N  T  +++  +  A+   +A   F   M    +P+ V++N +M+   K G +
Sbjct: 94  KQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDV 153

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
            +A  L   M   G+     ++N +L G C  G+++ A E+F  M  +   + + SY+I+
Sbjct: 154 KKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLI-SYTIM 211

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I+G CK+++++ A++L+ +M+ K I PDVV +  L  GL +  +V+ A+ LF+E +  G 
Sbjct: 212 IDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 271

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
                TY T IDGLCK G I  A+ L+  + R    + D+  Y++LI+GL  S R E A 
Sbjct: 272 HPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAY 331

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVPNVITFDMLIRG 423
           EL+  +      P+VVTY+ ++ GLC  G  DKA ++F  M   N   PNVIT+ +LI  
Sbjct: 332 ELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDR 391

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F +++     ++L  +M+  +++PDA   + V+  L K
Sbjct: 392 FCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCK 429


>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
 gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
          Length = 438

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/332 (34%), Positives = 182/332 (54%), Gaps = 4/332 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
           GR+  GF  LG ++K  F  +A+TF  L+KGLCA+ R  +A  +   ++    C PDVF+
Sbjct: 109 GRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFS 168

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            T L+ GLC  + +  AL L   MA+  G       P+ V+YTT+I+G  KEG  DKA  
Sbjct: 169 CTILLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVINGFFKEGDSDKAYS 225

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D+ I PNVVTY+S+I   C A+  ++A  +   M+  GV P+ +T+N I+   C
Sbjct: 226 TYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 285

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            +G+  EA   L  M   GV P+  TY +L++  C  GR   A+++F SM   G +  + 
Sbjct: 286 SSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIA 345

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y  L+ GY     +    +L   M+  GI+PD  + N L     +  +V++A  +F +M
Sbjct: 346 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 405

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           +++G+  +   Y T ID LCK+G + +A+  F
Sbjct: 406 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 437



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 165/337 (48%), Gaps = 4/337 (1%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           + P++ TY+ +I   C A   +        ++ +G +   +TF  ++  LC + +  +A 
Sbjct: 91  VTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAM 150

Query: 190 RL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM---ESMGCKHTVFSYSIL 245
            + L  M +    PD F+   LL G C   R   A EL   M      G    V SY+ +
Sbjct: 151 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 210

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ING+ K  + + A S Y EML + I P+VV ++++   L +   +++A ++ + M +NGV
Sbjct: 211 INGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 270

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE 365
             D  TY + + G C +G   EA+     +R    E ++  Y SL++ LCK+GR   A +
Sbjct: 271 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARK 330

Query: 366 LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
           +F S+    L P++ TY  ++ G    G + +   L   M  N + P+   F++LI  + 
Sbjct: 331 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 390

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           +  +  + + +  KM++  + P+      V+D+L K+
Sbjct: 391 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 427



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 164/333 (49%), Gaps = 7/333 (2%)

Query: 153 AKRLFIEMMDQG---VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
           A  LF  M   G   V P++ T+++++   C+ G++D     L  +I+ G R +A T+  
Sbjct: 76  AVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAP 135

Query: 210 LLDGFCLTGRVNHAKELFVS-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           LL G C   R + A ++ +  M  + C   VFS +IL+ G C     + AL L   M   
Sbjct: 136 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 195

Query: 269 ---GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
              G  PDVV + T+  G F+    ++A+  + EM    ++ +  TY + I  LCK   +
Sbjct: 196 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAM 255

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            +A+E+ +T+       D   YNS++ G C SG+ + A+   + +    + PNVVTY  +
Sbjct: 256 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSL 315

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           +  LC +G+  +AR +F  M +  + P++ T+  L++G+       ++  LL  M    +
Sbjct: 316 MNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 375

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
            PD  + +I++   AK E    ++  F+   Q 
Sbjct: 376 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQH 408


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 185/367 (50%), Gaps = 10/367 (2%)

Query: 57  DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           D +TY  LV   C       A++L  EM    G       P    Y   +  LCK G V 
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGM-----APTPSMYNFFVHALCKSGKVP 71

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A E++  MKD   KP+VVT+ ++I G C A   +EA+++  EM   G   N+VT+N ++
Sbjct: 72  EAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLI 131

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGC 235
           + L   G+  EA  ++  M      PD  TYN ++ GFC +G ++ A      M +  GC
Sbjct: 132 NGLSSAGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGC 188

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIHNTLFVGLFEIHQVERAF 294
               F+YSILING CK+  +  A  L  EM+  K     VV  NTL  G  +   ++RA 
Sbjct: 189 SPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAR 248

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +L   M  +G A D  TY T IDGLC+ G + +   L   +    C+ D+  Y  L+ GL
Sbjct: 249 ELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGL 308

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           CK+G++  A  L + +      PN VTYS++  GLC   ++D A DL   + +   + +V
Sbjct: 309 CKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDV 368

Query: 415 ITFDMLI 421
           + F+ L+
Sbjct: 369 VAFEALL 375



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 189/368 (51%), Gaps = 12/368 (3%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           D  T+  L++  C    +  A  L  ++ +  G  P    Y   V+ LC++     A+ +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + M +G       C+P+ VT+ T+I GLCK G +D+A+++L +M+      N+VTY ++
Sbjct: 77  VKNMKDG------ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTL 130

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH-G 199
           I G   A    EA    + M      P+  T+N I+   CK+G++D A   L+ M Q  G
Sbjct: 131 INGLSSAGRSGEA---VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG 187

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGA 258
             PD FTY+ L++G C +  +  A EL   M     C  +V +++ L++GYCK ++++ A
Sbjct: 188 CSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L S ML  G  PDVV ++T+  GL     V++ F L ++M   G   D  TY   + G
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTG 307

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           LCK G +VEA  L   +    C  +   Y+ + DGLCK  +L++A +L  S+     + +
Sbjct: 308 LCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITD 367

Query: 379 VVTYSIMI 386
           VV +  ++
Sbjct: 368 VVAFEALL 375



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 6/329 (1%)

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           TY  ++R  C A +   A  L  EM  Q G+ P    +N  +  LCK+GK+ EA  ++  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M     +PD  T+NTL+ G C  GR++ A+++   ME  G    + +Y+ LING      
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYR 313
              A+ +   M +    PD   +N +  G  +  +++RA+   +EM QR G + DT+TY 
Sbjct: 140 SGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
             I+GLCK+  + +A EL   +   K C   + A+N+L+DG CK+  L+ A EL  S+  
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
               P+VVTYS +I GLC  G +DK   L   M      P+V+T+ +L+ G  +  +  +
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAK 461
              L+ +M E    P+A   S+V D L K
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 159/317 (50%), Gaps = 11/317 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     V+  +      PD VTF +LI GLC   R+ EA  +  ++   G   ++ TY
Sbjct: 68  GKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTY 127

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NGL     +  A+ + +         G+   P+T TY  II G CK G +D+A   
Sbjct: 128 NTLINGLSSAGRSGEAVLVMQ---------GMTTTPDTQTYNAIIHGFCKSGEIDRAYGF 178

Query: 122 LLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDEL 179
           L +MK +    P+  TY+ +I G C + +  +A  L  EM+  +    +VV FN ++D  
Sbjct: 179 LEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGY 238

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK   +D A  LL  M++HG  PD  TY+T++DG C  G V+    L   M S GCK  V
Sbjct: 239 CKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDV 298

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y++L+ G CK  ++  A  L   ML  G  P+ V ++ +F GL +I +++ A  L   
Sbjct: 299 VTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTS 358

Query: 300 MQRNGVAADTWTYRTFI 316
           ++  G   D   +   +
Sbjct: 359 IRDKGRITDVVAFEALL 375



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 179/354 (50%), Gaps = 6/354 (1%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           +  TY  ++   C  G +  A +LL +M+ +  + P    Y   +   C +    EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
              M D   +P+VVTFN ++  LCK G++DEA ++LD M + G   +  TYNTL++G   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVV 275
            GR   + E  + M+ M       +Y+ +I+G+CK+ EI+ A     EM  + G  PD  
Sbjct: 137 AGR---SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEM-QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
            ++ L  GL +   + +A +L  EM  R    A    + T +DG CK   +  A EL  +
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +    C  D+  Y+++IDGLC+ G ++    L   +      P+VVTY++++ GLC  G+
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           M +A  L   M E+   PN +T+ ++  G  +I++     +LL  +++   + D
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITD 367



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 149/284 (52%), Gaps = 9/284 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL  + +S F  + VT+ +LI GL +  R  EA  +   +      PD  TY
Sbjct: 103 GRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTY 159

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G C++     A    EEM    G     C P+T TY+ +I+GLCK   + KA EL
Sbjct: 160 NAIIHGFCKSGEIDRAYGFLEEMKQRAG-----CSPDTFTYSILINGLCKSSNLRKADEL 214

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L +M   K+   +VV + +++ G+C A+D + A+ L   M++ G  P+VVT++ I+D LC
Sbjct: 215 LQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLC 274

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G +D+   LL+ M+  G +PD  TY  L+ G C  G++  A  L   M   GC     
Sbjct: 275 RCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +YS++ +G CK  +++ A  L + +  KG   DVV    L + +
Sbjct: 335 TYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSV 378


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 219/430 (50%), Gaps = 6/430 (1%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F ++I G C + ++ +A  +F  ++  G  PDV +Y+ LV+GLC+    +    +  EMA
Sbjct: 286 FNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMA 345

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
             NG       PN V+Y++++ GLC+ G V+ A EL  ++KD+  K + + Y+ V+ G C
Sbjct: 346 R-NG-----ITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCC 399

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
              D      L+ +M+     P+   ++ ++   C++ ++ EA  + +LM+  G+ P+  
Sbjct: 400 QHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVV 459

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           T   L+ GF   G +  A      +   G   ++ +Y ++I+G CK  +      ++++M
Sbjct: 460 TCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADM 519

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
           + +G  PD V+++ +  G  +   ++ AF+L+ +M   G   + +TY + I+GLC +  +
Sbjct: 520 IKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKL 579

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            E + LF  +       D   Y SLI   CK   ++ ALE+FR +    L  +   Y+ +
Sbjct: 580 PEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCL 639

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           IGG      MD A+    +M    + P V+T+  LI G+ +I +  K + + + M +  +
Sbjct: 640 IGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGI 699

Query: 446 MPDASIVSIV 455
            PDA +  I+
Sbjct: 700 APDAKLSCIL 709



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 206/433 (47%), Gaps = 4/433 (0%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           L+K L   ++IM A +LF  ++  G  P+V++Y+ L++    T    + L    E+ +  
Sbjct: 182 LLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMS--MYTHGAKLCLEEALELLSEM 239

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
              GV   PN  TY T + GLC    V  A   L  +  +    N   + +VI GFC+  
Sbjct: 240 EVEGV--RPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDG 297

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
             ++A  +F  M   G  P+V ++++++D LCK G +     +L  M ++G+ P+  +Y+
Sbjct: 298 QVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYS 357

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           +LL G C  GRV  A ELF  ++  G KH    YSI+++G C++ ++E    L+++M+  
Sbjct: 358 SLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHH 417

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
              PD   +++L        Q++ A ++F+ M  +G+  +  T    + G    G I EA
Sbjct: 418 NFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEA 477

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
                 +R       +  Y  +I GLCK  +      +F  +     VP+ V YSI+I G
Sbjct: 478 FLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDG 537

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
                 + +A  L+  M +    PN+ T+  LI G    ++  +V+ L   M    + PD
Sbjct: 538 FVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPD 597

Query: 449 ASIVSIVVDLLAK 461
             + + ++    K
Sbjct: 598 RILYTSLIACYCK 610



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 201/395 (50%), Gaps = 12/395 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G+ +L  + ++  TP+ V+++SL+ GLC   R+  A  LF +L+  G + D   Y
Sbjct: 332 GDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVY 391

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + +++G C+     +  +L+ +M + N        P+   Y+++I   C+   + +A E+
Sbjct: 392 SIVLHGCCQHLDLEICYDLWNDMVHHN------FVPDAYNYSSLIYAYCRHRQLKEALEV 445

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELC 180
              M    I PNVVT T ++ GF       EA  LF++ + Q GV P++ T+ VI+  LC
Sbjct: 446 FELMVSDGICPNVVTCTILVHGFSNEGLIGEA-FLFLDKVRQFGVVPSLCTYRVIIHGLC 504

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K  K ++   +   MI+ G  PD   Y+ ++DGF     +  A  L+  M   G K  +F
Sbjct: 505 KVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIF 564

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LING C + ++   ++L+  M+ +G+ PD +++ +L     +   ++ A ++F EM
Sbjct: 565 TYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREM 624

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-CEFDIRAYNSLIDGLCKSGR 359
           +  G++AD++ Y   I G  K    ++  +LF    + K     +  Y  LI G  K G 
Sbjct: 625 ETEGLSADSFVYTCLIGGFSKV-LAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGD 683

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
            + A+ ++ S+    + P+     I+  GL NDG 
Sbjct: 684 EKKAMAMYNSMLQAGIAPDAKLSCIL--GLGNDGH 716



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 177/396 (44%), Gaps = 72/396 (18%)

Query: 137 YTSVIRGFCYAKDWNE---------------------------------AKRLFIEMMDQ 163
           Y +VIR F     + +                                 A+ LF +M   
Sbjct: 146 YATVIRVFVELSMFEDALVTYVEAKKVGVELQVCNFLLKRLVEGNQIMYARSLFDDMKSS 205

Query: 164 GVQPNVVTFNVIMD-------------------------------------ELCKNGKMD 186
           G  PNV +++V+M                                       LC   ++ 
Sbjct: 206 GPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAKQVK 265

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A   L ++ Q G   + + +N ++ GFC  G+V+ A E+F  M+  G    V SYSIL+
Sbjct: 266 SAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILV 325

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +G CK  ++     +  EM   GI P++V +++L  GL    +VE AF+LF  ++  G  
Sbjct: 326 DGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFK 385

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            D   Y   + G C++  +    +L++ +       D   Y+SLI   C+  +L+ ALE+
Sbjct: 386 HDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEV 445

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD-MEENAVVPNVITFDMLIRGFI 425
           F  +    + PNVVT +I++ G  N+G + +A  LFLD + +  VVP++ T+ ++I G  
Sbjct: 446 FELMVSDGICPNVVTCTILVHGFSNEGLIGEAF-LFLDKVRQFGVVPSLCTYRVIIHGLC 504

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++N+P+ +  +   M +   +PD  + SI++D   K
Sbjct: 505 KVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVK 540


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 195/390 (50%), Gaps = 7/390 (1%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G++      L  +++  F PD  T T ++  LC    +  A   F K+   G +P++  +
Sbjct: 832  GKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINF 891

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+L++GLC+      A  + EEM   NG      +PN  T+T +IDGLCK G+ +KA  L
Sbjct: 892  TSLIDGLCKKGSIKQAFEMLEEMVR-NG-----WKPNVYTHTALIDGLCKRGWTEKAFRL 945

Query: 122  LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
             L++ +    KPNV TYTS+I G+C     N A+ LF  M +QG+ PNV T+  +++  C
Sbjct: 946  FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 1005

Query: 181  KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
            K G    A  L++LM   G  P+ +TYN  +D  C   R   A EL     S G +    
Sbjct: 1006 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 1065

Query: 241  SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            +Y+ILI   CK  +I  AL+ +  M   G + D+ ++N L        +++ + +LF  +
Sbjct: 1066 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 1125

Query: 301  QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
               G+     TY + I   CK G I  A++ FH ++   C  D   Y SLI GLCK   +
Sbjct: 1126 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 1185

Query: 361  EIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
            + A +L+ ++    L P  VT   +    C
Sbjct: 1186 DEACKLYEAMIDRGLSPPEVTRVTLAYEYC 1215



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 223/465 (47%), Gaps = 8/465 (1%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +GR++    ++  +     TP ++T   +++       I  A  +F ++ V G  PD  +
Sbjct: 761  IGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 820

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            Y  +V G  R      A    +    G  + G +  P+  T T I+  LC+ G V++A  
Sbjct: 821  YKLMVIGCFRDGKIQEA----DRWLTGMIQRGFI--PDNATCTLILTALCENGLVNRAIW 874

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               +M D   KPN++ +TS+I G C      +A  +  EM+  G +PNV T   ++D LC
Sbjct: 875  YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 934

Query: 181  KNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K G  ++A RL L L+     +P+  TY +++ G+C   ++N A+ LF  M+  G    V
Sbjct: 935  KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 994

Query: 240  FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             +Y+ LING+CK      A  L + M  +G  P++  +N     L +  +   A++L ++
Sbjct: 995  NTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 1054

Query: 300  MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
                G+ AD  TY   I   CK   I +A+  F  +     E D+R  N LI   C+  +
Sbjct: 1055 AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 1114

Query: 360  LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            ++ +  LF+ +    L+P   TY+ MI   C +G +D A   F +M+ +  VP+  T+  
Sbjct: 1115 MKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGS 1174

Query: 420  LIRGFIRINEPSKVIELLHKMKEINVM-PDASIVSIVVDLLAKNE 463
            LI G  + +   +  +L   M +  +  P+ + V++  +   +N+
Sbjct: 1175 LISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND 1219



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 203/422 (48%), Gaps = 9/422 (2%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            PD+ ++  ++ G   + +I EA    T +   G  PD  T T ++  LC       A+  
Sbjct: 816  PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY 875

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            F +M +      +  +PN + +T++IDGLCK+G + +A E+L +M     KPNV T+T++
Sbjct: 876  FRKMID------LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 929

Query: 141  IRGFCYAKDWNE-AKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            I G C  + W E A RLF++++     +PNV T+  ++   CK  K++ A  L   M + 
Sbjct: 930  IDGLC-KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 988

Query: 199  GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
            G+ P+  TY TL++G C  G    A EL   M   G    +++Y+  I+  CK      A
Sbjct: 989  GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 1048

Query: 259  LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
              L ++  S G++ D V +  L     + + + +A   F  M + G  AD       I  
Sbjct: 1049 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 1108

Query: 319  LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             C+   + E+  LF  +  L        Y S+I   CK G +++AL+ F ++     VP+
Sbjct: 1109 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 1168

Query: 379  VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
              TY  +I GLC    +D+A  L+  M +  + P  +T   L   + + N+ +  + LL 
Sbjct: 1169 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 1228

Query: 439  KM 440
             +
Sbjct: 1229 PL 1230



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 201/437 (45%), Gaps = 7/437 (1%)

Query: 29   LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
            +++      R+ EA  +   ++  G  P   T   ++           A N+F+EM+   
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR- 812

Query: 89   GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
               GVV  P++ +Y  ++ G  ++G + +A   L  M  +   P+  T T ++   C   
Sbjct: 813  ---GVV--PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 867

Query: 149  DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
              N A   F +M+D G +PN++ F  ++D LCK G + +A  +L+ M+++G +P+ +T+ 
Sbjct: 868  LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 927

Query: 209  TLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
             L+DG C  G    A  LF+ +  S   K  V +Y+ +I GYCK  ++  A  L+S M  
Sbjct: 928  ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 987

Query: 268  KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            +G+ P+V  + TL  G  +     RA++L + M   G   + +TY   ID LCK     E
Sbjct: 988  QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE 1047

Query: 328  AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
            A EL +       E D   Y  LI   CK   +  AL  F  +       ++   +I+I 
Sbjct: 1048 AYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIA 1107

Query: 388  GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
              C   +M ++  LF  +    ++P   T+  +I  + +  +    ++  H MK    +P
Sbjct: 1108 AFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVP 1167

Query: 448  DASIVSIVVDLLAKNEI 464
            D+     ++  L K  +
Sbjct: 1168 DSFTYGSLISGLCKKSM 1184



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 185/395 (46%), Gaps = 21/395 (5%)

Query: 63   TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            T+V  L   S ++VAL  F   A G  +F          Y    D L   G + KA E++
Sbjct: 697  TVVASLASESGSMVALCFFY-WAVGFEKFRHFMR----LYLVTADSLLANGNLQKAHEVM 751

Query: 123  LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
              M               +R F      NEA  + ++M +QG+ P+ +T N +++   + 
Sbjct: 752  RCM---------------LRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVEL 796

Query: 183  GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            G ++ A  + D M   GV PD+ +Y  ++ G    G++  A      M   G      + 
Sbjct: 797  GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC 856

Query: 243  SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
            ++++   C+N  +  A+  + +M+  G KP+++   +L  GL +   +++AF++ +EM R
Sbjct: 857  TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 916

Query: 303  NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLE 361
            NG   + +T+   IDGLCK G+  +A  LF  L R    + ++  Y S+I G CK  +L 
Sbjct: 917  NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 976

Query: 362  IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             A  LF  +    L PNV TY+ +I G C  G   +A +L   M +   +PN+ T++  I
Sbjct: 977  RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 1036

Query: 422  RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
                + +   +  ELL+K     +  D    +I++
Sbjct: 1037 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 1071


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 231/479 (48%), Gaps = 8/479 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR    F+   ++++    P  +T++ L+KGL    RI +A  +  ++   G  P+V  Y
Sbjct: 301 GRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVY 360

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ L        A+ + + M +            + TY T+I G CK G  D A+ L
Sbjct: 361 NNLIDSLIEAGSLNKAIEIKDLMVSKGLSL------TSSTYNTLIKGYCKSGQADIAERL 414

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M       N  ++TSVI   C    ++ A R   EM+ + + P       ++  LCK
Sbjct: 415 LKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 474

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +GK  +A  L    +  G   D  T N LL G C  G++     +   +   G      S
Sbjct: 475 HGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVS 534

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G C NK+++ A     EM+ KG+KPD   ++ L  GL  +++VE A + + + +
Sbjct: 535 YNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCK 594

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           RNG+  D +TY   IDG CK     E  +LF  +     + +   YN LI   C+SGRL 
Sbjct: 595 RNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLS 654

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +ALEL   +    + PN  TY+ +I G+    ++++A+ L  +M    + PNV  +  LI
Sbjct: 655 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALI 714

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEE 480
            G+ ++ +  KV  LL +M   NV P+    ++++   A++     +  S  +HE +E+
Sbjct: 715 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA--SRLLHEMREK 771



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 218/439 (49%), Gaps = 41/439 (9%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  PDV+ +TT +N  C+      A+ LF +M     E GVV  PN VTY T+IDGL   
Sbjct: 247 GVSPDVYLFTTAINAFCKGGKVEEAIELFSKME----EAGVV--PNVVTYNTVIDGLGMS 300

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G  D+A     +M ++ ++P ++TY+ +++G   AK   +A  +  EM ++G  PNV+ +
Sbjct: 301 GRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVY 360

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++D L + G +++A  + DLM+  G+   + TYNTL+ G+C +G+ + A+ L   M S
Sbjct: 361 NNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLS 420

Query: 233 MG---------------CKHTVFSYSI--------------------LINGYCKNKEIEG 257
           +G               C H +F  ++                    LI+G CK+ +   
Sbjct: 421 IGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 480

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A+ L+ + L+KG   D    N L  GL E  ++E  F++  E+   G   D  +Y T I 
Sbjct: 481 AVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLIS 540

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           G C N  + EA      +     + D   Y+ LI GL    ++E A++ +       ++P
Sbjct: 541 GCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIP 600

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           +V TYS+MI G C   + ++ + LF +M  N + PN + ++ LI  + R    S  +EL 
Sbjct: 601 DVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELR 660

Query: 438 HKMKEINVMPDASIVSIVV 456
             MK   + P+++  + ++
Sbjct: 661 EDMKHKGISPNSATYTSLI 679



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 220/453 (48%), Gaps = 29/453 (6%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   + VL  + +  F P+ + + +LI  L     + +A  +   +   G      TY 
Sbjct: 337 RIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 396

Query: 63  TLVNGLCRTSHTIVALNLFEEMAN-----GNGEF-GVVC--------------------- 95
           TL+ G C++    +A  L +EM +       G F  V+C                     
Sbjct: 397 TLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLR 456

Query: 96  --EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
              P     TT+I GLCK G   KA EL L+  +K    +  T  +++ G C A    E 
Sbjct: 457 NMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEG 516

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
            R+  E++ +G   + V++N ++   C N K+DEA   +D M++ G++PD +TY+ L+ G
Sbjct: 517 FRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRG 576

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
                +V  A + +   +  G    V++YS++I+G CK +  E    L+ EM+S  ++P+
Sbjct: 577 LLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPN 636

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
            V++N L        ++  A +L ++M+  G++ ++ TY + I G+     + EA  L  
Sbjct: 637 TVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLE 696

Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
            +R+   E ++  Y +LIDG  K G++     L R +    + PN +TY++MIGG   DG
Sbjct: 697 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 756

Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
            + +A  L  +M E  +VP+ IT+   I G+++
Sbjct: 757 NVTEASRLLHEMREKGIVPDSITYKEFIYGYLK 789



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 158/327 (48%), Gaps = 6/327 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S    +  + L   F  D  T  +L+ GLC   ++ E   +  ++   G   D  +Y
Sbjct: 476 GKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSY 535

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G C       A    +EM           +P+  TY+ +I GL     V++A + 
Sbjct: 536 NTLISGCCGNKKLDEAFMFMDEMVKKG------LKPDNYTYSILIRGLLNMNKVEEAIQF 589

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
               K   + P+V TY+ +I G C A+   E ++LF EMM   +QPN V +N ++   C+
Sbjct: 590 WGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCR 649

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++  A  L + M   G+ P++ TY +L+ G  +  RV  AK L   M   G +  VF 
Sbjct: 650 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFH 709

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+GY K  ++     L  EM SK + P+ + +  +  G      V  A +L  EM+
Sbjct: 710 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMR 769

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEA 328
             G+  D+ TY+ FI G  K G +++A
Sbjct: 770 EKGIVPDSITYKEFIYGYLKQGGVLQA 796



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 6/298 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++  GF +   IL   F  D V++ +LI G C   ++ EA     ++   G +PD +TY
Sbjct: 511 GKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTY 570

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+ GL   +    A+  + +    NG       P+  TY+ +IDG CK    ++ ++L
Sbjct: 571 SILIRGLLNMNKVEEAIQFWGDCKR-NGMI-----PDVYTYSVMIDGCCKAERTEEGQKL 624

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M   N++PN V Y  +I  +C +   + A  L  +M  +G+ PN  T+  ++  +  
Sbjct: 625 FDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 684

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             +++EA  LL+ M   G+ P+ F Y  L+DG+   G++   + L   M S        +
Sbjct: 685 ISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 744

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           Y+++I GY ++  +  A  L  EM  KGI PD + +     G  +   V +AFK  DE
Sbjct: 745 YTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 183/409 (44%), Gaps = 71/409 (17%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           + +K + P+  T   ++     A ++ +    F  ++ +GV P+V  F   ++  CK GK
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAINAFCKGGK 267

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           ++EA  L   M + GV P+  TYNT++DG  ++GR + A      M   G + T+ +YSI
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           L+ G  K K I  A  +  EM  KG  P+V+++N L   L E   + +A ++ D M   G
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKG 387

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVEL---------------FHTLRILKCE---FD--- 343
           ++  + TY T I G CK+G    A  L               F ++  L C    FD   
Sbjct: 388 LSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSAL 447

Query: 344 -------IRAYN-------SLIDGLCKSGRLEIALELF-RSLPCGVLVP----------- 377
                  +R  +       +LI GLCK G+   A+EL+ + L  G LV            
Sbjct: 448 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGL 507

Query: 378 -----------------------NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
                                  + V+Y+ +I G C + ++D+A     +M +  + P+ 
Sbjct: 508 CEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDN 567

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
            T+ +LIRG + +N+  + I+     K   ++PD    S+++D   K E
Sbjct: 568 YTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAE 616



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 6/223 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           M +V       G   ++   PD  T++ +I G C   R  E   LF ++     +P+   
Sbjct: 580 MNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVV 639

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+   CR+    +AL L E+M +          PN+ TYT++I G+     V++AK 
Sbjct: 640 YNHLIGAYCRSGRLSMALELREDMKHKG------ISPNSATYTSLIKGMSIISRVEEAKL 693

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           LL +M+ + ++PNV  YT++I G+       + + L  EM  + V PN +T+ V++    
Sbjct: 694 LLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 753

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           ++G + EASRLL  M + G+ PD+ TY   + G+   G V  A
Sbjct: 754 RDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQA 796



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 1/167 (0%)

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  +F  +   G+     T    +  L +     +  E FH +       D+  + + I+
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVV-CKGVSPDVYLFTTAIN 260

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
             CK G++E A+ELF  +    +VPNVVTY+ +I GL   G+ D+A      M E  V P
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEP 320

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            +IT+ +L++G  +         +L +M E    P+  + + ++D L
Sbjct: 321 TLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSL 367


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 218/442 (49%), Gaps = 8/442 (1%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           C TP   T++  I  LC  +RI     L   +  FG  PD++     ++ LC+ +    A
Sbjct: 222 CLTP--FTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDA 279

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTY 137
           L + E+M  G G       P+ VTYTT++  LC      +A  L  +M    +KP+VV  
Sbjct: 280 LQMVEKM-RGKGTI-----PDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVAC 333

Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
            ++I G C      EA  L   M+   ++ +V  +N ++    + G +D+A  ++  M  
Sbjct: 334 GALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRT 393

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
           +G  P   TYN LL+ +C  G +  A+ L   ME+ G     +SY+ L+ G CK  +++ 
Sbjct: 394 NGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDK 453

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A +  S+ +  G   D+V  N L     ++ +V+ A +LF EM   G+ AD  TY T I+
Sbjct: 454 AFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLIN 513

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
           GL   GY   A ELF  +   + + ++  YN ++  LCK G L+ A ++F  +    ++P
Sbjct: 514 GLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILP 573

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           ++VTY+ +I  L  + +  +A DLF DM    V P+ +TF  LI G +     +   E+ 
Sbjct: 574 DIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVW 633

Query: 438 HKMKEINVMPDASIVSIVVDLL 459
             M E  ++ D  +   ++ +L
Sbjct: 634 EYMMENGIILDREVSERLISVL 655



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 185/372 (49%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY+  I  LC+   ++  +ELL  M      P++      I   C     ++A ++  +M
Sbjct: 227 TYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKM 286

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
             +G  P+VVT+  ++  LC N +  EA  L + M++ G++PD      L+ G C   +V
Sbjct: 287 RGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKV 346

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A EL   M S+  + +V  Y+ LI+G+ +   I+ A ++ S M + G +P VV +N L
Sbjct: 347 EEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNIL 406

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
                 I  +E+A  L  +M+ +GV  D ++Y   + GLCK   + +A         +  
Sbjct: 407 LNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGG 466

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             DI + N LID  CK  +++ ALELF+ +    +  + VTY  +I GL + G  + A +
Sbjct: 467 FCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEE 526

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           LF  M +  + PNV  +++++    ++ +  +  ++   M +  ++PD    + ++  L 
Sbjct: 527 LFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLG 586

Query: 461 KNEISLNSLPSF 472
           KN  ++ +L  F
Sbjct: 587 KNSRAMEALDLF 598



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 164/333 (49%), Gaps = 6/333 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R S    +   ++K    PD V   +LI GLC  S++ EA  L +++     E  V  Y 
Sbjct: 310 RFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYN 369

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++G  R      A  +   M   NG     CEP  VTY  +++  C  G ++KA+ L+
Sbjct: 370 ALISGFWRAGSIDKAYTIISFMRT-NG-----CEPGVVTYNILLNHYCTIGMMEKAENLI 423

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M+   + P+  +Y  +++G C     ++A     + M+ G   ++V+ N+++D  CK 
Sbjct: 424 TKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKV 483

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            K+  A  L   M   G++ DA TY TL++G    G  N A+ELF  M        V  Y
Sbjct: 484 KKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLY 543

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +I+++  CK  +++ A  ++  M+ K I PD+V +NTL   L +  +   A  LF +M+ 
Sbjct: 544 NIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRT 603

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            GV  D+ T++  I+GL   G    A E++  +
Sbjct: 604 KGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYM 636



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 180/409 (44%), Gaps = 12/409 (2%)

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG--NGEFGVVCEPNTVTYTTIIDGLCKE 112
           E D F    +V GL   S T V    + E   G  + +F +           I+  L  +
Sbjct: 84  ELDPFVVNLVVRGL-SDSETAVRFYWWAESRPGFDHSQFAI---------AYIVSLLFVD 133

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G      E L  ++ + +  +   Y  ++ G+  A  ++     F EM+  G +   + +
Sbjct: 134 GNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDY 193

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N  +  L KN   D   +   + +  G+    FTY+  +   C + R+   +EL   M+ 
Sbjct: 194 NRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDR 253

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G    +++ +I I+  CK   +  AL +  +M  KG  PDVV + T+   L    +   
Sbjct: 254 FGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSE 313

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A  L++EM + G+  D       I GLCKN  + EA EL   +  L  E  +  YN+LI 
Sbjct: 314 AVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALIS 373

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           G  ++G ++ A  +   +      P VVTY+I++   C  G M+KA +L   ME + V P
Sbjct: 374 GFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNP 433

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +  +++ L++G  + ++  K    +    E+    D    +I++D   K
Sbjct: 434 DRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCK 482



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 135/289 (46%)

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           + +G+     T++  +  LC++ +++    LL  M + G  PD +  N  +D  C   R+
Sbjct: 217 LSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRL 276

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
           + A ++   M   G    V +Y+ ++   C NK    A+ L+ EM+  G+KPDVV    L
Sbjct: 277 HDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGAL 336

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +  +VE AF+L   M    +      Y   I G  + G I +A  +   +R   C
Sbjct: 337 IFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGC 396

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           E  +  YN L++  C  G +E A  L   +    + P+  +Y+ ++ GLC   Q+DKA  
Sbjct: 397 EPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFA 456

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
              D  E     ++++ ++LI  F ++ +    +EL  +M    +  DA
Sbjct: 457 FVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADA 505



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 6/272 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   + ++  +  +   P  VT+  L+   C    + +A  L TK+   G  PD ++Y
Sbjct: 379 GSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSY 438

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLC+T     A     +    + E G  C+   V+   +ID  CK   V  A EL
Sbjct: 439 NQLLKGLCKTHQLDKAFAFVSD----HMEVGGFCD--IVSCNILIDAFCKVKKVKSALEL 492

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K ++ + VTY ++I G      +N A+ LF +M+   + PNV  +N+++  LCK
Sbjct: 493 FKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCK 552

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +  A ++   MIQ  + PD  TYNTL+       R   A +LF  M + G +    +
Sbjct: 553 VGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLT 612

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +  LING         A  ++  M+  GI  D
Sbjct: 613 FKYLINGLLDEGRSTLAYEVWEYMMENGIILD 644


>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
 gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
          Length = 381

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 192/357 (53%), Gaps = 1/357 (0%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           CEPN VTY  IID +C+EG VD+A+ELL  +  +  KPN V Y +V++G C  + W +A+
Sbjct: 12  CEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAE 71

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
            L  EM+ +   PN  T NVI++ L + G + + +R L+ M +HG   +  TYN ++ G 
Sbjct: 72  ELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGM 131

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G V+ A EL  +M+S GCK  + +Y+ L+ G C   + E A  L  +M      PD 
Sbjct: 132 CEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDN 191

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           V  NT+   L +   + +AF++F +M   G   ++ TY T I GL K G + +A+EL + 
Sbjct: 192 VTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNE 251

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           +       D + Y  L + L K  ++E  +++   L    + P  V ++ ++  LC +G+
Sbjct: 252 MASKGYNTD-KMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGK 310

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
            D A D+  DM     +P+ +T+ +LI G        +  EL+ ++   +V+ ++ I
Sbjct: 311 TDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVLSNSLI 367



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 181/358 (50%), Gaps = 9/358 (2%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
           L   +R  GCEP+V TY  +++ +CR      A  L   + +        C+PNTV Y T
Sbjct: 3   LIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRG------CKPNTVNYNT 56

Query: 105 IIDGLCK-EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
           ++ GLC  E +VD A+ELL +M  +N  PN  T   ++          +  R   +M   
Sbjct: 57  VLKGLCSIERWVD-AEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKH 115

Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
           G   NVVT+N ++  +C+ G +D A  LL  M   G +PD  TYNTLL G C   +   A
Sbjct: 116 GCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDA 175

Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
           +EL + M    C     +++ +I+  C+   I  A  ++ +M  KG  P+   ++T+  G
Sbjct: 176 EELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGG 235

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L +  ++E+A +L +EM   G   D   Y+   + L K   I E V++ H L+       
Sbjct: 236 LAKAGKMEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQ 294

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
              +N+++  LC++G+ + A+++   +     +P+ +TY I+I GL  +G + +AR+L
Sbjct: 295 TVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEAREL 352



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 170/350 (48%), Gaps = 7/350 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ VT+  +I  +C E  + +A  L   L   GC+P+   Y T++ GLC     + A  L
Sbjct: 14  PNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEEL 73

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM   N      C PN  T   I++ L ++G + K    L +M       NVVTY +V
Sbjct: 74  LDEMVREN------CPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAV 127

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C     + A  L   M   G +P++VT+N ++  LC   + ++A  L+  M Q+  
Sbjct: 128 ISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDC 187

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T+NT++   C  G +  A E+F  M   GC     +YS +I G  K  ++E AL 
Sbjct: 188 LPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALE 247

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L +EM SKG   D  ++  L   L +  ++E   ++  ++Q +G++  T  + T +  LC
Sbjct: 248 LLNEMASKGYNTD-KMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLC 306

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           +NG    A+++   +    C  D   Y  LI+GL   G L+ A EL   L
Sbjct: 307 RNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRL 356



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 171/341 (50%), Gaps = 1/341 (0%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           EL+  M+ +  +PNVVTY  +I   C   D ++A+ L   +  +G +PN V +N ++  L
Sbjct: 2   ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C   +  +A  LLD M++    P+  T N +++     G +         M   GC   V
Sbjct: 62  CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ +I+G C+   ++ AL L S M S G KPD+V +NTL  GL    Q E A +L  +
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M +N    D  T+ T I  LC+ G I++A E+F  +    C  +   Y+++I GL K+G+
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGK 241

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +E ALEL   +       + + Y ++   L  + ++++   +   ++++ + P  + F+ 
Sbjct: 242 MEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNT 300

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           ++    R  +    I++L  M     MPD     I+++ L+
Sbjct: 301 VLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLS 341



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 7/278 (2%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L ++ K   T + VT+ ++I G+C +  +  A  L + ++ FGC+PD+ TY TL+ GLC 
Sbjct: 109 LEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCS 168

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 A  L  +M+  +      C P+ VT+ TII  LC++G + +A E+  QM +K  
Sbjct: 169 ADQWEDAEELMIKMSQND------CLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGC 222

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PN  TY+++I G   A    +A  L  EM  +G   + + + ++ + L K  K++E  +
Sbjct: 223 NPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQ 281

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           ++  +   G+ P    +NT+L   C  G+ ++A ++   M S GC     +Y ILI G  
Sbjct: 282 VVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLS 341

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
               ++ A  L S + S+ +  + +I N   +    IH
Sbjct: 342 YEGYLQEARELVSRLCSRDVLSNSLIKNEALLLDQNIH 379



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 123/246 (50%), Gaps = 11/246 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L  +      PD VT+ +L+KGLC+  +  +A  L  K+    C PD  T+
Sbjct: 135 GHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTF 194

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T+++ LC+    + A  +F++M     E G  C PN+ TY+TII GL K G +++A EL
Sbjct: 195 NTIISFLCQKGLILQAFEVFKQMP----EKG--CNPNSTTYSTIIGGLAKAGKMEQALEL 248

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  K    + + Y  +           E  ++  ++ D G+ P  V FN ++  LC+
Sbjct: 249 LNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCR 307

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           NGK D A  +L  M+ +G  PD  TY  L++G    G +  A+EL   +    C   V S
Sbjct: 308 NGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRL----CSRDVLS 363

Query: 242 YSILIN 247
            S++ N
Sbjct: 364 NSLIKN 369



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 100/208 (48%)

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M ++G +P+VV +N +   +     V++A +L + +   G   +T  Y T + GLC    
Sbjct: 7   MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIER 66

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
            V+A EL   +    C  +    N +++ L + G L+        +       NVVTY+ 
Sbjct: 67  WVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNA 126

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I G+C  G +D A +L  +M+     P+++T++ L++G    ++     EL+ KM + +
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186

Query: 445 VMPDASIVSIVVDLLAKNEISLNSLPSF 472
            +PD    + ++  L +  + L +   F
Sbjct: 187 CLPDNVTFNTIISFLCQKGLILQAFEVF 214


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 222/421 (52%), Gaps = 10/421 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+  L+K LC   ++  A  L  ++   GC PD  +YTT+V  +C       A   
Sbjct: 178 PNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEA--- 234

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             E+A   G  GVV   N      +I GLC+EG V +   L+ +M    + PNVV+Y+SV
Sbjct: 235 -REVARRFGAEGVVSVCNA-----LICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSV 288

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I       +   A  +  +M+ +G +PNV TF+ +M      G++ E   L  +M+  GV
Sbjct: 289 ISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGV 348

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMES-MGCKHTVFSYSILINGYCKNKEIEGAL 259
           RP+   YNTLL+G C +G +  A ++   ME    C+  V +YS L++G+ K  +++GA 
Sbjct: 349 RPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGAS 408

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++++M++ G++P+VV++ ++   L +    ++A++L D M  +G      T+ TFI GL
Sbjct: 409 EVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGL 468

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C  G ++ A+ +   ++   C  D R YN L+DGL     L+ A EL R L    +  N+
Sbjct: 469 CCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNL 528

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           VTY+ ++ G  + G+ +    +   M  N V P+ IT +++I  + ++ +    I+ L +
Sbjct: 529 VTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDR 588

Query: 440 M 440
           +
Sbjct: 589 I 589



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 216/443 (48%), Gaps = 46/443 (10%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD V++T+++  +C + R+ EA  +    R FG E  V     L+ GLCR         L
Sbjct: 213 PDGVSYTTVVAAMCEDGRVEEAREV---ARRFGAEGVVSVCNALICGLCREGRVGEVFGL 269

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM  GNG      +PN V+Y+++I  L   G V+ A  +L +M  +  +PNV T++S+
Sbjct: 270 MDEMV-GNG-----VDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSL 323

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG- 199
           ++G+       E   L+  M+ +GV+PNVV +N +++ LC +G + EA  +   M +   
Sbjct: 324 MKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCF 383

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            RP+  TY+TL+ GF   G +  A E++  M + G +  V  Y+ +++  CKN   + A 
Sbjct: 384 CRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAY 443

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            L   M + G  P VV  NT   GL    +V  A ++ D+MQR G   DT TY   +DGL
Sbjct: 444 RLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGL 503

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALE-LFRSLPCGV---- 374
                + EA EL   L   K E ++  YN+++ G    G+ E  L+ L R L  GV    
Sbjct: 504 FSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDA 563

Query: 375 -------------------------------LVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
                                          L P+++ ++ ++ G+CN   +++A     
Sbjct: 564 ITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLN 623

Query: 404 DMEENAVVPNVITFDMLIRGFIR 426
            M    + PN+ T+D+L+RGF +
Sbjct: 624 KMLNKGIFPNIATWDVLVRGFFK 646



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 228/452 (50%), Gaps = 12/452 (2%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAES--RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           RI +    P    +  L+  L  ES  +     A++  +R  G EP+VFTY  L+  LC+
Sbjct: 133 RIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCK 192

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 A  L  EM+         C P+ V+YTT++  +C++G V++A+E+  +   + +
Sbjct: 193 NGKLDGACKLLVEMSKRG------CVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV 246

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
              V    ++I G C      E   L  EM+  GV PNVV+++ ++  L   G+++ A  
Sbjct: 247 ---VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALA 303

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +L  MI+ G RP+  T+++L+ G+ L GRV     L+  M   G +  V  Y+ L+NG C
Sbjct: 304 VLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLC 363

Query: 251 KNKEIEGALSLYSEMLSKGI-KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            +  +  A+ +   M      +P+V  ++TL  G  +   ++ A +++++M   GV  + 
Sbjct: 364 CSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNV 423

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y + +D LCKN    +A  L   +    C   +  +N+ I GLC  GR+  A+ +   
Sbjct: 424 VVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQ 483

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +     +P+  TY+ ++ GL +  ++ +A +L  ++EE  V  N++T++ ++ GF    +
Sbjct: 484 MQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGK 543

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
              V+++L +M    V PDA  V++V+   +K
Sbjct: 544 EEWVLQVLGRMLVNGVKPDAITVNVVIYAYSK 575



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 187/402 (46%), Gaps = 40/402 (9%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V     VLG++++    P+  TF+SL+KG     R+ E   L+  + + G  P+V  
Sbjct: 295 VGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVV 354

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL+NGLC + +   A+++   M     E    C PN  TY+T++ G  K G +  A E
Sbjct: 355 YNTLLNGLCCSGNLAEAVDVCGRM-----EKDCFCRPNVTTYSTLVHGFVKAGDLQGASE 409

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M +  ++PNVV YTS++   C    +++A RL   M   G  P VVTFN  +  LC
Sbjct: 410 VWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLC 469

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G++  A R++D M ++G  PD  TYN LLDG      +  A EL   +E    +  + 
Sbjct: 470 CGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLV 529

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ ++ G+  + + E  L +   ML  G+KPD +  N +     ++ +V  A +  D +
Sbjct: 530 TYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRI 589

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                        T    LC                      DI A+ SL+ G+C S  +
Sbjct: 590 -------------TAGKELCP---------------------DIIAHTSLLWGICNSLGI 615

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCND-GQMDKARDL 401
           E A+     +    + PN+ T+ +++ G     G M   R L
Sbjct: 616 EEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRIL 657



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 195/406 (48%), Gaps = 11/406 (2%)

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + + + L R  + + AL  F+ + N      +  +   +TY  +I+ L +   +D    +
Sbjct: 41  SHVAHALRREPNVLYALQHFQYLTNT-----LAFKHTPLTYHVMIEKLGRNSELDALHYI 95

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC- 180
           L QMK + I  +  ++  V+  +  +   + A ++F  + + G +P V  +N ++D L  
Sbjct: 96  LHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLG 155

Query: 181 -KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
               K      + + M   G+ P+ FTYN LL   C  G+++ A +L V M   GC    
Sbjct: 156 ESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDG 215

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY+ ++   C++  +E A  +     ++G+   V + N L  GL    +V   F L DE
Sbjct: 216 VSYTTVVAAMCEDGRVEEAREVARRFGAEGV---VSVCNALICGLCREGRVGEVFGLMDE 272

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M  NGV  +  +Y + I  L   G +  A+ +   +    C  ++  ++SL+ G    GR
Sbjct: 273 MVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGR 332

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV-PNVITFD 418
           +   + L+R +    + PNVV Y+ ++ GLC  G + +A D+   ME++    PNV T+ 
Sbjct: 333 VGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYS 392

Query: 419 MLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
            L+ GF++  +     E+ +KM    V P+  + + +VD+L KN +
Sbjct: 393 TLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSM 438



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 17/275 (6%)

Query: 6   HGFV----------VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
           HGFV          V  +++     P+ V +TS++  LC  S   +A  L   +   GC 
Sbjct: 396 HGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCP 455

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P V T+ T + GLC     + A+ + ++M      +G  C P+T TY  ++DGL     +
Sbjct: 456 PTVVTFNTFIKGLCCGGRVLWAMRVVDQMQ----RYG--CLPDTRTYNELLDGLFSVNEL 509

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            +A EL+ +++++ ++ N+VTY +V+ GF          ++   M+  GV+P+ +T NV+
Sbjct: 510 KEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVV 569

Query: 176 MDELCKNGKMDEASRLLD-LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +    K GK+  A + LD +     + PD   + +LL G C +  +  A      M + G
Sbjct: 570 IYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKG 629

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
               + ++ +L+ G+ K     G + +  ++L KG
Sbjct: 630 IFPNIATWDVLVRGFFKKLGHMGPIRILDDILGKG 664


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 190/359 (52%), Gaps = 6/359 (1%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           +     IL+  F P    +  LI   C E  I +A  +F ++R  G  P   ++ TL+NG
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           LC++ +      L + M            P+  TY+ +I GLCKEG +D A++L  +M+ 
Sbjct: 268 LCKSRNLDEGFRLKKTMEENR------IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
           + ++PN +T+T++I G   ++  + A   + +M+  GV+P++V +N +++ LCK G +++
Sbjct: 322 RGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A +L+D M   G++PD  TY TL+DG+C  G +  A E+   M   G      +++ LI+
Sbjct: 382 ARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           G+C++  +  A     EM+  G+KPD   +  +  G  +   V+  FKL  EMQ NG   
Sbjct: 442 GFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
              TY   ++GLCK G +  A  L   +  L    D   YN L++G CK+G+ E  L+L
Sbjct: 502 GVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 184/331 (55%)

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
           P V  Y  +I  FC      +AK +F E+  +G++P  V+FN +++ LCK+  +DE  RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
              M ++ + PD FTY+ L+ G C  GR++ A++LF  M+  G +    +++ LI+G  +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
           ++ ++ A++ Y +ML+ G+KPD+V++NTL  GL ++  V +A KL DEM+  G+  D  T
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
           Y T IDG CK G +  A+E+   +       D  A+ +LI G C+ GR+  A    R + 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
              + P+  TY+++I G C  G +     L  +M+ N   P VIT+++L+ G  +  +  
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               LL  M  + V PD    +I+++   KN
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKN 551



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 195/380 (51%), Gaps = 9/380 (2%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
            ++++  +G  P V  Y  L+N  C+      A  +F E+            P TV++ T
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG------LRPTTVSFNT 263

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           +I+GLCK   +D+   L   M++  I P+V TY+ +I G C     + A++LF EM  +G
Sbjct: 264 LINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG 323

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           ++PN +TF  ++D   ++ +MD A      M+  GV+PD   YNTLL+G C  G VN A+
Sbjct: 324 LRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKAR 383

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +L   M+ +G K    +Y+ LI+GYCK  ++E A+ +   M  +G+  D V    L  G 
Sbjct: 384 KLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGF 443

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               +V  A +   EM   G+  D  TY   IDG CK G +    +L   ++I   +  +
Sbjct: 444 CRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGV 503

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             YN L++GLCK G+++ A  L  ++    + P+ +TY+I++ G C +G   KA DL   
Sbjct: 504 ITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKL 560

Query: 405 MEENAVVPNVITFDMLIRGF 424
             E  ++ +   +  L+  +
Sbjct: 561 RNEKGLIVDYAYYTSLVSEY 580



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 175/356 (49%), Gaps = 9/356 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +    ++   I K    P  V+F +LI GLC    + E   L   +      PDVFTY
Sbjct: 237 GSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTY 296

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L++GLC+     VA  LF+EM            PN +T+T +IDG  +   +D A   
Sbjct: 297 SVLIHGLCKEGRLDVAEQLFDEMQQRG------LRPNGITFTALIDGQYRSRRMDSAMNT 350

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM    +KP++V Y +++ G C   D N+A++L  EM   G++P+ +T+  ++D  CK
Sbjct: 351 YHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCK 410

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G ++ A  +   M + GV  D   +  L+ GFC  GRV  A+     M   G K    +
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+++I+GYCK   ++    L  EM   G KP V+ +N L  GL +  Q++ A  L + M 
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAML 530

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
             GV  D  TY   ++G CKNG   + ++L +   ++    D   Y SL+    KS
Sbjct: 531 NLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLI---VDYAYYTSLVSEYNKS 583



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 156/329 (47%), Gaps = 11/329 (3%)

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
           N   ++ T+    + +C   ++  A ++F E        +++ F V      + GK   A
Sbjct: 89  NWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQ------SIIRFLV-----SRKGKDSAA 137

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           S    ++   G R   F ++ L+  +  +G V+ A + F  + +   +        L++ 
Sbjct: 138 SVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDK 197

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
              +       + YSE+L  G  P V  +N L     +   +  A  +F+E+++ G+   
Sbjct: 198 MINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPT 257

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
           T ++ T I+GLCK+  + E   L  T+   +   D+  Y+ LI GLCK GRL++A +LF 
Sbjct: 258 TVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFD 317

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L PN +T++ +I G     +MD A + +  M    V P+++ ++ L+ G  ++ 
Sbjct: 318 EMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVG 377

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + +K  +L+ +MK + + PD    + ++D
Sbjct: 378 DVNKARKLVDEMKMVGMKPDKITYTTLID 406


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 223/494 (45%), Gaps = 49/494 (9%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           +++GLC E R+ E   L       GC P    Y  L++G CR       L L  EM    
Sbjct: 87  MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK- 145

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
              G++  P  VTY  II  L ++G + K + LL +M+ + + PNV  Y +VI   C  +
Sbjct: 146 ---GII--PTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCR 200

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
             ++A  +  +M+     P+VVTFN ++   C+ G + EA +LL   I+ G+ P+  +Y 
Sbjct: 201 SASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYT 260

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHT-------------VFS-------------- 241
            L+ GFC+ G    A +L V M  MG  HT             V S              
Sbjct: 261 PLIHGFCVRGEAMVASDLLVEM--MGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMA 318

Query: 242 ----------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
                     Y++LI+G CK + +  A +L  EML + ++PD  I+ TL  G     ++ 
Sbjct: 319 ERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLS 378

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
            A K+F+ M+      D   Y   I G CK G + EAV    ++R   C  D   Y +L+
Sbjct: 379 DARKIFEFMEEK-ACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLV 437

Query: 352 DGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
           DG  K G +  +L L   +      PN+ TY+ +I G CN G    A DLF  M+   + 
Sbjct: 438 DGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLF 497

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK---NEISLNS 468
           PNV+ + +LI    + ++  +       M   +  P+ + V  +V+ L       ++ N 
Sbjct: 498 PNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNR 557

Query: 469 LPSFTVHEQQEEVD 482
             +   HE+   +D
Sbjct: 558 SDTKQAHEKSALLD 571



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 215/461 (46%), Gaps = 56/461 (12%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
            S    +L +++KS F PD VTF ++I G C E  + EA  L  +    G EP+  +YT 
Sbjct: 202 ASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTP 261

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGE-----------FGVVCE---------------- 96
           L++G C     +VA +L  EM  G G             G+V                  
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMM-GRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAER 320

Query: 97  ---PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
              P+   Y  +I GLCK+  +  AK LL +M ++ ++P+   YT++I GF  +   ++A
Sbjct: 321 QVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDA 380

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
           +++F E M++   P++V +NV++   CK G M EA   +  M + G  PD FTY TL+DG
Sbjct: 381 RKIF-EFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDG 439

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +   G ++ +  L   M    CK  +F+Y+ LI GYC   +   A  L+++M S+G+ P+
Sbjct: 440 YAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPN 499

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL--CKNGYIVEAVEL 331
           VV +  L   LF+  +V +A   F+ M  N    +  T    ++GL  C++G +      
Sbjct: 500 VVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMV------ 553

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
                           NS      ++      L++FR L    L P +  Y+ +I  LC 
Sbjct: 554 ----------------NSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCR 597

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
              + KA DL   M     +P+ ITF  L+ GF    E  K
Sbjct: 598 HNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGK 638



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 190/408 (46%), Gaps = 7/408 (1%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
            A  L+ ++ V     D ++   +V GLC          L E        +G  C P  V
Sbjct: 64  RARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIE------ARWGEGCVPGAV 117

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
            Y  +IDG C+ G + +   LL +M+ K I P VVTY ++I       D  + + L  EM
Sbjct: 118 FYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEM 177

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
             +G+ PNV  +N +++ LCK     +AS +L+ M++    PD  T+NT++ GFC  G V
Sbjct: 178 RARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDV 237

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A +L       G +    SY+ LI+G+C   E   A  L  EM+ +G  PD++    L
Sbjct: 238 REALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGAL 297

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL    QV  A  + ++M    V  D   Y   I GLCK   +  A  L   +   K 
Sbjct: 298 IHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKV 357

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D   Y +LIDG  +S +L  A ++F  +      P++V Y++MI G C  G M +A  
Sbjct: 358 QPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAVT 416

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               M +   +P+  T+  L+ G+ +  + S  + LL  M +    P+
Sbjct: 417 CMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPN 464



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 146/302 (48%)

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
            G  P+    N ++  L +  + + A  L   M+      D ++   ++ G CL GRV  
Sbjct: 40  HGALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEE 99

Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
            + L  +    GC      Y++LI+GYC+  +I   L L  EM +KGI P VV +  +  
Sbjct: 100 GRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIH 159

Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
            L     + +   L  EM+  G++ +   Y T I+ LCK     +A ++ + +   +   
Sbjct: 160 WLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNP 219

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D+  +N++I G C+ G +  AL+L R      L PN ++Y+ +I G C  G+   A DL 
Sbjct: 220 DVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLL 279

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++M      P++IT   LI G +   + +  + +  KM E  VMPDA+I ++++  L K 
Sbjct: 280 VEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKK 339

Query: 463 EI 464
            +
Sbjct: 340 RM 341


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 253/533 (47%), Gaps = 83/533 (15%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR   GF VL  ++ +    D   +T +I+G C+E ++ EA ++  ++   G  PDV+ Y
Sbjct: 268 GRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVY 327

Query: 62  TTLVNGLCRTSHTIVALNLFEEMAN---------------GNGEFGVVCEP--------- 97
             L++G C   + + AL L +EM +               G  + G+  E          
Sbjct: 328 CALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKK 387

Query: 98  -----NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
                +   Y  ++D LCK G V++A ELL++MK K + P+++ YT+VI G+       +
Sbjct: 388 MGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVD 447

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  ++ EM D G +P++VT+NV+     +NG   EA  LL+ M   GV+PD  T+N +++
Sbjct: 448 ALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIE 507

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI----------------- 255
           G C+ G+V+ A+  F ++E    +  + +YS ++NGYC+   +                 
Sbjct: 508 GLCIGGKVDDAQAFFDNLE----EKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRIL 563

Query: 256 ------------------EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
                             E AL L   M++  I P +++++ +   LF+  ++E+A  +F
Sbjct: 564 KKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVF 623

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF--------------HTLRILKC-EF 342
           + +   G+A D  TY   I+G C+   + EA  +               +T+ +  C + 
Sbjct: 624 NMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKI 683

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           D+R+ +S +D +     +     L+  +    + P+V+ Y+++I   C    +  A +LF
Sbjct: 684 DLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLF 743

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
            +M +  + P+ +T+  L+ G+  +    K + L  +M    + PDA  +S++
Sbjct: 744 NEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 241/493 (48%), Gaps = 54/493 (10%)

Query: 9   VVLGRILKS-CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           + + R LK+    P+  T+T  IKG C +  + EA  +F  +   G  P+ F+YTT + G
Sbjct: 204 IAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEG 263

Query: 68  LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
           LC    + +   + +++ N      V        YT +I G C E  + +A+ +L +M+ 
Sbjct: 264 LCLHGRSDLGFKVLQDVINAKIPMDVF------AYTVVIRGFCSEMKLKEAESILREMEK 317

Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT---------------- 171
           +   P+V  Y ++I G+C   +  +A  L  EM+ +GV+ N V                 
Sbjct: 318 QGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASE 377

Query: 172 -------------------FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
                              +NV+MD LCK GK++EA  LL  M    + PD   Y T++ 
Sbjct: 378 VANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVIS 437

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G+ L G+V  A  ++  M+ +G K  + +Y++L  G+ +N   + ALSL + M ++G+KP
Sbjct: 438 GYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKP 497

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D V HN +  GL    +V+ A   FD ++   +      Y   ++G C+  ++ +A  L 
Sbjct: 498 DTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE----NYSAMVNGYCEANHVNKAFALL 553

Query: 333 HTL----RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
             L    RILK      ++  L+  LC  G  E AL L  ++    + P ++ YS +IG 
Sbjct: 554 IRLSKQGRILK----KASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGA 609

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           L   G+M+KA+ +F  + +  + P+VIT+ ++I G+ R+N+  +   +L  MK   + PD
Sbjct: 610 LFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPD 669

Query: 449 ASIVSIVVDLLAK 461
               +++++  +K
Sbjct: 670 VITYTVLLNNCSK 682



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 202/434 (46%), Gaps = 51/434 (11%)

Query: 42  AAALFTKLRVFGCEPDVFTYTTLVNGLC-----RTSHTIVA-------------LNLFEE 83
           A + F +L+  G   D +TY  +V  LC     R   +I+              +NLFE 
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135

Query: 84  MANG--NGEFGVVCE-------------------------------PNTVTYTTIIDGLC 110
           + +G  N  F V+ +                               P  ++   +++ L 
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLV 195

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           +   VD A  +  Q+K   + PN  TYT  I+GFC   +  EA  +F +M + GV PN  
Sbjct: 196 ESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSF 255

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           ++   ++ LC +G+ D   ++L  +I   +  D F Y  ++ GFC   ++  A+ +   M
Sbjct: 256 SYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM 315

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
           E  G    V+ Y  LI+GYC    +  AL+L+ EM+SKG+K + VI +++  GL ++   
Sbjct: 316 EKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMA 375

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
                 F E ++ G+  D   Y   +D LCK G + EAVEL   ++  K   DI  Y ++
Sbjct: 376 SEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTV 435

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I G    G++  AL ++R +      P++VTY+++ GG   +G   +A  L   ME   V
Sbjct: 436 ISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGV 495

Query: 411 VPNVITFDMLIRGF 424
            P+ +T +M+I G 
Sbjct: 496 KPDTVTHNMIIEGL 509



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 191/400 (47%), Gaps = 25/400 (6%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+V     +L  +      PD + +T++I G   + ++++A  ++ +++  G +PD+ T
Sbjct: 407 LGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVT 466

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L  G  R   T  AL+L   M       GV  +P+TVT+  II+GLC  G VD A+ 
Sbjct: 467 YNVLAGGFSRNGLTQEALSLLNYMETQ----GV--KPDTVTHNMIIEGLCIGGKVDDAQA 520

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               +++K ++     Y++++ G+C A   N+A  L I +  QG      +F  ++  LC
Sbjct: 521 FFDNLEEKCLE----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLC 576

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G  ++A  LL+ M+   + P    Y+ ++      G +  A+ +F  +   G    V 
Sbjct: 577 SEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVI 636

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF-----VGLFEIHQVERAFK 295
           +Y+I+INGYC+  +++ A  +  +M ++GI+PDV+ +  L      + L        A K
Sbjct: 637 TYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMK 696

Query: 296 ----------LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                     L+ EM+   +  D   Y   ID  CK   I +A+ LF+ +       D  
Sbjct: 697 SKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTV 756

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            Y +L+ G C  G ++ A+ LF  +    + P+  T S++
Sbjct: 757 TYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 182/433 (42%), Gaps = 102/433 (23%)

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL--------------------FIEMMDQ 163
           Q+K+     +  TY +++R  C+   W  +++L                      E +  
Sbjct: 82  QLKESGYSHDPYTYAAIVRILCF---WGWSRKLDSILMEIIKKDGNLDFGIVNLFEALGD 138

Query: 164 GVQPNVVTFNVIM---DELCK----NGKMDEA---------------------------- 188
           G+     +F+V++   D L K    +G  D+A                            
Sbjct: 139 GIANE--SFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVE 196

Query: 189 SRLLDLMI-------QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG------- 234
           SR +D+ I         G+ P+ +TY   + GFC  G +  A ++F  ME  G       
Sbjct: 197 SRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFS 256

Query: 235 --------CKH--------------------TVFSYSILINGYCKNKEIEGALSLYSEML 266
                   C H                     VF+Y+++I G+C   +++ A S+  EM 
Sbjct: 257 YTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREME 316

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +G  PDV ++  L  G   +  + +A  L DEM   GV  +     + + GL + G   
Sbjct: 317 KQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMAS 376

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           E    F   + +   FD   YN ++D LCK G++E A+EL   +    +VP+++ Y+ +I
Sbjct: 377 EVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVI 436

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G    G++  A +++ +M++    P+++T+++L  GF R     + + LL+ M+   V 
Sbjct: 437 SGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVK 496

Query: 447 PDASIVSIVVDLL 459
           PD    +++++ L
Sbjct: 497 PDTVTHNMIIEGL 509



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 24/180 (13%)

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY----------IVEA--------VELFHT 334
           AF  F++++ +G + D +TY   +  LC  G+          I++         V LF  
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135

Query: 335 LR--ILKCEFDI--RAYNSLIDGLCKSGRLEIALE-LFRSLPCGVLVPNVVTYSIMIGGL 389
           L   I    F +  +  ++LI     SG  + A + L ++  CG   P +++ + ++  L
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCG-FAPQILSCNFLMNRL 194

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
               ++D A  ++  ++   + PN  T+ + I+GF R    ++ I++   M+E  V P++
Sbjct: 195 VESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNS 254


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 203/417 (48%), Gaps = 7/417 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++      L  +++  F PD  T T ++  LC    +  A   F K+   G +P++  +
Sbjct: 231 GKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINF 290

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           T+L++GLC+      A  + EEM   NG      +PN  T+T +IDGLCK G+ +KA  L
Sbjct: 291 TSLIDGLCKKGSIKQAFEMLEEMVR-NGW-----KPNVYTHTALIDGLCKRGWTEKAFRL 344

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L++ +    KPNV TYTS+I G+C     N A+ LF  M +QG+ PNV T+  +++  C
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G    A  L++LM   G  P+ +TYN  +D  C   R   A EL     S G +    
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILI   CK  +I  AL+ +  M   G + D+ ++N L        +++ + +LF  +
Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 524

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     TY + I   CK G I  A++ FH ++   C  D   Y SLI GLCK   +
Sbjct: 525 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
           + A +L+ ++    L P  VT   +    C       A  L   +++   +  V T 
Sbjct: 585 DEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTL 641



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 223/465 (47%), Gaps = 8/465 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR++    ++  +     TP ++T   +++       I  A  +F ++ V G  PD  +
Sbjct: 160 IGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 219

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +V G  R      A    +    G  + G +  P+  T T I+  LC+ G V++A  
Sbjct: 220 YKLMVIGCFRDGKIQEA----DRWLTGMIQRGFI--PDNATCTLILTALCENGLVNRAIW 273

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
              +M D   KPN++ +TS+I G C      +A  +  EM+  G +PNV T   ++D LC
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333

Query: 181 KNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           K G  ++A RL L L+     +P+  TY +++ G+C   ++N A+ LF  M+  G    V
Sbjct: 334 KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 393

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LING+CK      A  L + M  +G  P++  +N     L +  +   A++L ++
Sbjct: 394 NTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
               G+ AD  TY   I   CK   I +A+  F  +     E D+R  N LI   C+  +
Sbjct: 454 AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 513

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           ++ +  LF+ +    L+P   TY+ MI   C +G +D A   F +M+ +  VP+  T+  
Sbjct: 514 MKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGS 573

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVM-PDASIVSIVVDLLAKNE 463
           LI G  + +   +  +L   M +  +  P+ + V++  +   +N+
Sbjct: 574 LISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND 618



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 203/422 (48%), Gaps = 9/422 (2%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD+ ++  ++ G   + +I EA    T +   G  PD  T T ++  LC       A+  
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY 274

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F +M     + G   +PN + +T++IDGLCK+G + +A E+L +M     KPNV T+T++
Sbjct: 275 FRKMI----DLGF--KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328

Query: 141 IRGFCYAKDWNE-AKRLFIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           I G C  + W E A RLF++++     +PNV T+  ++   CK  K++ A  L   M + 
Sbjct: 329 IDGLC-KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P+  TY TL++G C  G    A EL   M   G    +++Y+  I+  CK      A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L ++  S G++ D V +  L     + + + +A   F  M + G  AD       I  
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+   + E+  LF  +  L        Y S+I   CK G +++AL+ F ++     VP+
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
             TY  +I GLC    +D+A  L+  M +  + P  +T   L   + + N+ +  + LL 
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627

Query: 439 KM 440
            +
Sbjct: 628 PL 629



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 198/428 (46%), Gaps = 7/428 (1%)

Query: 38  RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
           R+ EA  +   ++  G  P   T   ++           A N+F+EM+      GVV  P
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR----GVV--P 215

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           ++ +Y  ++ G  ++G + +A   L  M  +   P+  T T ++   C     N A   F
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            +M+D G +PN++ F  ++D LCK G + +A  +L+ M+++G +P+ +T+  L+DG C  
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335

Query: 218 GRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
           G    A  LF+ +  S   K  V +Y+ +I GYCK  ++  A  L+S M  +G+ P+V  
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           + TL  G  +     RA++L + M   G   + +TY   ID LCK     EA EL +   
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E D   Y  LI   CK   +  AL  F  +       ++   +I+I   C   +M 
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           ++  LF  +    ++P   T+  +I  + +  +    ++  H MK    +PD+     ++
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575

Query: 457 DLLAKNEI 464
             L K  +
Sbjct: 576 SGLCKKSM 583



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 16/357 (4%)

Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           Y    D L   G + KA E++  M               +R F      NEA  + ++M 
Sbjct: 130 YLVTADSLLANGNLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQ 174

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
           +QG+ P+ +T N +++   + G ++ A  + D M   GV PD+ +Y  ++ G    G++ 
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A      M   G      + ++++   C+N  +  A+  + +M+  G KP+++   +L 
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKC 340
            GL +   +++AF++ +EM RNG   + +T+   IDGLCK G+  +A  LF  L R    
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + ++  Y S+I G CK  +L  A  LF  +    L PNV TY+ +I G C  G   +A +
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           L   M +   +PN+ T++  I    + +   +  ELL+K     +  D    +I++ 
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 222/418 (53%), Gaps = 12/418 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V+  + V  +++     P+ VT+T++I  LC E  I +A  LF +++  G  P+++TY
Sbjct: 187 GDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTY 246

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++   +  +   AL  + ++     + G+V  PN V +TT+IDGLCK   + +AK +
Sbjct: 247 NALMSSHFKRDNIKHALVFYYDLL----KCGLV--PNDVIFTTLIDGLCKANRITEAKNI 300

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            L M    + P V  Y S+I G   +    EA   F E++ + ++P+  T ++++  LC 
Sbjct: 301 FLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCD 360

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+M  A+R L++M Q G+  +A  YN L+D +C +G ++ A      M  +G +  V +
Sbjct: 361 GGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVT 420

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS LI+G+ KN E+E A+++Y+EM++KG++P+VV +  L  G  +   ++ AF L  EM+
Sbjct: 421 YSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEME 480

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE------FDIRAYNSLIDGLC 355
             G+ ++  T    +DGLC+   + +AV         K         +   Y +LI GL 
Sbjct: 481 EKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLY 540

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
             G+   A   F  +    +VP+  TY+++I GLC  G +  A  L+ DM +  V P 
Sbjct: 541 IDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 207/397 (52%), Gaps = 9/397 (2%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           EA ++F +LR     P +     +++GL +         LF+EM       G    P+ V
Sbjct: 124 EALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEM------LGRGMVPSVV 174

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY T+I+    +G V KA E+  QM  + I PNVVTYT++I   C      +A+ LF+EM
Sbjct: 175 TYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEM 234

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
            + G++PN+ T+N +M    K   +  A      +++ G+ P+   + TL+DG C   R+
Sbjct: 235 KEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRI 294

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             AK +F+ M       TV  Y+ LI+G  ++   + AL+ + E++ K ++PD    + +
Sbjct: 295 TEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIV 354

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +  Q++ A +  + MQ++G+A +   Y   ID  CK+G + EA+     +  +  
Sbjct: 355 VRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGV 414

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           E ++  Y+SLIDG  K+G +EIA+ ++  +    + PNVVTY+ +I G   +G MD A  
Sbjct: 415 EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFW 474

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           L  +MEE  +  N IT  +L+ G  R N     +  +
Sbjct: 475 LQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFI 511



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 182/372 (48%), Gaps = 1/372 (0%)

Query: 91  FGVVCE-PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
           FG + E P       I+DGL K   + +  EL  +M  + + P+VVTY ++I    +  D
Sbjct: 129 FGRLRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGD 188

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
             +A  ++ +M+ + + PNVVT+  ++  LC+   + +A  L   M + G+RP+ +TYN 
Sbjct: 189 VAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNA 248

Query: 210 LLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
           L+        + HA   +  +   G       ++ LI+G CK   I  A +++ +M    
Sbjct: 249 LMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYE 308

Query: 270 IKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAV 329
           + P V ++N+L  G F     + A   F E+ R  +  D +T    + GLC  G +  A 
Sbjct: 309 VAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVAT 368

Query: 330 ELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGL 389
                ++      +  AYN LID  CKSG L+ AL     +    + PNVVTYS +I G 
Sbjct: 369 RFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGH 428

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
             +G+M+ A  ++ +M    V PNV+T+  LI G  +  +      L  +M+E  +  +A
Sbjct: 429 SKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNA 488

Query: 450 SIVSIVVDLLAK 461
             VS++VD L +
Sbjct: 489 ITVSVLVDGLCR 500



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 142/296 (47%)

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P +   N I+D L K   +     L D M+  G+ P   TYNTL++     G V  A E+
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           +  M +      V +Y+ +I   C+   I  A  L+ EM   G++P++  +N L    F+
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              ++ A   + ++ + G+  +   + T IDGLCK   I EA  +F  +   +    +  
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           YNSLI G  +SG  + AL  F+ +    L P+  T SI++ GLC+ GQM  A      M+
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           ++ +  N   +++LI  + +     + +    +M E+ V P+    S ++D  +KN
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKN 431


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 231/512 (45%), Gaps = 65/512 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPD---- 57
           GRV     + GR+ +S   P  VTF  LI GL    R  E  AL  ++   G  P+    
Sbjct: 280 GRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVIC 339

Query: 58  -------------------------------VFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
                                            TY  +   LC+      A  + EEM +
Sbjct: 340 NELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLS 399

Query: 87  G-----NGEFGVVC-------------------------EPNTVTYTTIIDGLCKEGFVD 116
                 +G F  V                          +PN    T     LC+     
Sbjct: 400 TGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQ 459

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  + L+M +K +  N+ T  ++I G C  K+   A  +   M+++G++ + +T+N+++
Sbjct: 460 EAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMI 519

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
              CK+ K++EA +L D MI+ G +PDA+ +N+++  +C  G++  A  L   M+  G +
Sbjct: 520 QGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQ 579

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
             V SY  +I+GYCK K+I+ A    +E+++ G+KP+ VI+N L  G      +  A  +
Sbjct: 580 PDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGV 639

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            D M+  G+     TY + +  +C  G + EA  +F   R    E  +  Y  +I GLCK
Sbjct: 640 LDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCK 699

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G+++ A+  F  +    + PN +TY+ ++   C  G  ++A  LF +M  + +VP+ ++
Sbjct: 700 IGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVS 759

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           ++ L+ GF +++   K IE   ++  I    D
Sbjct: 760 YNTLVTGFSQVDSLDKAIEKAAEISSIMTQND 791



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 211/447 (47%), Gaps = 10/447 (2%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE---PDVFTYTTLVNGLCRTSHTIV 76
           +P   T  +L++ L     +     +F ++R   C+   P+ ++YT+++  LC+      
Sbjct: 190 SPSVKTCNALLEALARTGNLGATCKVFDEMR--DCKTVTPNGYSYTSMIKALCKVGKVDD 247

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
              +  ++ +     G+      V Y  ++D LCK G VD+A  L  +M++  + P++VT
Sbjct: 248 GFKILSDLIHA----GLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVT 303

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           +  +I G   +  + E   L  EM   G+ PN V  N ++D  C+ G   EA RL D M+
Sbjct: 304 FGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMV 363

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK-HTVFSYSILINGYCKNKEI 255
              ++  A TYN +    C  G +  A+ +   M S G   H+    S++     +   +
Sbjct: 364 SKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRL 423

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E  + L SEM+ +G+KP+  +       L +  + + A  ++ +M   G+  +  T    
Sbjct: 424 ESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNAL 483

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           I GLC+   +  A E+  T+     E D   YN +I G CK  ++E AL+L   +     
Sbjct: 484 IHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGF 543

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+   ++ +I   C+ G+M++A  L   M+   V P+V+++  +I G+ +  +  K  E
Sbjct: 544 KPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANE 603

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKN 462
            L+++    + P+A I + ++    +N
Sbjct: 604 YLNELMACGLKPNAVIYNALIGGYGRN 630



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 6/233 (2%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++     +LG++      PD V++ ++I G C    I +A     +L   G +P+   
Sbjct: 560 LGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVI 619

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L+ G  R  +   A+ + + M +     G+  +P  VTY +++  +C  G VD+AK 
Sbjct: 620 YNALIGGYGRNGNISGAIGVLDTMES----IGI--QPTNVTYCSLMHWMCHAGLVDEAKT 673

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  Q +  +I+  VV YT +I+G C     +EA   F EM  + + PN +T+  +M   C
Sbjct: 674 MFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYC 733

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
           K+G  +EAS+L D M+  G+ PD  +YNTL+ GF     ++ A E    + S+
Sbjct: 734 KSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSI 786



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 104/238 (43%), Gaps = 7/238 (2%)

Query: 210 LLDGFCLT----GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           LL   C+T    G +  A + F  + S     +V + + L+    +   +     ++ EM
Sbjct: 160 LLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEM 219

Query: 266 LS-KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV--AADTWTYRTFIDGLCKN 322
              K + P+   + ++   L ++ +V+  FK+  ++   G+  +A    Y   +D LCK+
Sbjct: 220 RDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKS 279

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
           G + EA+ L   +   +    +  +  LI+GL +S R      L R +    + PN V  
Sbjct: 280 GRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVIC 339

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           + +I   C  G   +A  LF +M    +    +T++++ R   +  E  +   +L +M
Sbjct: 340 NELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEM 397


>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 369

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 194/354 (54%), Gaps = 6/354 (1%)

Query: 48  KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIID 107
           K+   G EPD+ T ++LVNG C ++    A+ +  +M     + G+  + + V  T +ID
Sbjct: 3   KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME----KMGI--KRDVVVDTILID 56

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
            LCK   V  A E+L +MKD+ I PNVVTY+S+I G C +    +A+R   EM  + + P
Sbjct: 57  TLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINP 116

Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
           NV+TF+ ++D   K GK+ +   +  +MIQ  + P+ FTY++L+ G C+  RV+ A ++ 
Sbjct: 117 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176

Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
             M S GC   V +YS L NG+ K+  ++  + L  +M  +G+  + V  NTL  G F+ 
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236

Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
            +++ A  +F  M  NG+  +  +Y   + GL  NG + +A+  F  ++  + + DI  Y
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITY 296

Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
             +I G+CK+  ++ A +LF  L    + P+   Y+IMI  L   G   +A  L
Sbjct: 297 TIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 187/346 (54%), Gaps = 6/346 (1%)

Query: 13  RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
           +++K    PD VT +SL+ G C  + I +A  +  ++   G + DV   T L++ LC+  
Sbjct: 3   KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62

Query: 73  HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
             + AL + + M +          PN VTY+++I GLCK G +  A+  L +M  K I P
Sbjct: 63  LVVPALEVLKRMKDRG------ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINP 116

Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           NV+T++++I  +      ++   ++  M+   + PNV T++ ++  LC + ++DEA ++L
Sbjct: 117 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176

Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
           DLMI  G  P+  TY+TL +GF  + RV+   +L   M   G      S + LI GY + 
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236

Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +I+ AL ++  M S G+ P++  +N +  GLF   +VE+A   F+ MQ+     D  TY
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITY 296

Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSG 358
              I G+CK   + EA +LF+ L+  + E D +AY  +I  L ++G
Sbjct: 297 TIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 181/335 (54%)

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +L+M    I+P++VT +S++ GFC +    +A  +  +M   G++ +VV   +++D LCK
Sbjct: 1   MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           N  +  A  +L  M   G+ P+  TY++L+ G C +GR+  A+     M+S      V +
Sbjct: 61  NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +S LI+ Y K  ++    S+Y  M+   I P+V  +++L  GL   ++V+ A K+ D M 
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G   +  TY T  +G  K+  + + ++L   +       +  + N+LI G  ++G+++
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
           +AL +F  +    L+PN+ +Y+I++ GL  +G+++KA   F  M++     ++IT+ ++I
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            G  +     +  +L +K+K   V PD    +I++
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 6/328 (1%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           +     V G++ K     D V  T LI  LC    ++ A  +  +++  G  P+V TY++
Sbjct: 29  IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 88

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L+ GLC++     A     EM +          PN +T++ +ID   K G + K   +  
Sbjct: 89  LITGLCKSGRLADAERRLHEMDSKK------INPNVITFSALIDAYAKRGKLSKVDSVYK 142

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
            M   +I PNV TY+S+I G C     +EA ++   M+ +G  PNVVT++ + +   K+ 
Sbjct: 143 MMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSS 202

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++D+  +LLD M Q GV  +  + NTL+ G+   G+++ A  +F  M S G    + SY+
Sbjct: 203 RVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYN 262

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I++ G   N E+E ALS +  M       D++ +  +  G+ +   V+ A+ LF +++  
Sbjct: 263 IVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFK 322

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVEL 331
            V  D   Y   I  L + G   EA  L
Sbjct: 323 RVEPDFKAYTIMIAELNRAGMRTEADAL 350



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 142/288 (49%), Gaps = 1/288 (0%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M++ G+ PD  T ++L++GFCL+  +  A  +   ME MG K  V   +ILI+  CKN+ 
Sbjct: 4   MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +  AL +   M  +GI P+VV +++L  GL +  ++  A +   EM    +  +  T+  
Sbjct: 64  VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            ID   K G + +   ++  +  +  + ++  Y+SLI GLC   R++ A+++   +    
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
             PNVVTYS +  G     ++D    L  DM +  V  N ++ + LI+G+ +  +    +
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
            +   M    ++P+    +IV+  L  N     +L  F  H Q+   D
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE-HMQKTRND 290



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 29/226 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    V   +++    P+  T++SLI GLC  +R+ EA  +   +   GC P+V TY
Sbjct: 132 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 191

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGN-------------------------GEFGVVCE 96
           +TL NG  ++S     + L ++M                             G FG +  
Sbjct: 192 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS 251

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
               PN  +Y  ++ GL   G V+KA      M+      +++TYT +I G C A    E
Sbjct: 252 NGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKE 311

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           A  LF ++  + V+P+   + +++ EL + G   EA  L     +H
Sbjct: 312 AYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKH 357


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 234/457 (51%), Gaps = 15/457 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++G I      P+ +T+T+LI   C    + +A  ++ ++ V    PDV TYT ++NGLC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           ++     A ++F EM     E GVV  PN  +Y T+ID L KEG V +A  L  +M  + 
Sbjct: 134 KSGKVEEAKSVFREME----EVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I  +VV YT+++ G   A   N A+ +F  ++++ + PN VT++ ++D  CK G +++  
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M +  + P+   Y++++DG+   G +N A ++   M        VF Y  LI+GY
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  +   AL L+ EM S+G++ +  + ++    L    ++E A +LF +M   G+  D 
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y + +DG  K G   +A  +   +      FD+ AYN LI+GL K G+ E       S
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-----SES 422

Query: 370 LPCGV----LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
              G+    L P+  T++ MI   C +G +  A  L  +M+   + PN IT ++L++   
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
              E  K ++LL+ M  +   P  +    V+D  +K+
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 222/437 (50%), Gaps = 9/437 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  LI G C    I  A  L   ++  G  PD+ TY TL+NG C+      A  L  E++
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
             N       EPN +TYTT+ID  CK   ++ A  +  +M  K++ P+VVTYT ++ G C
Sbjct: 80  LVN------LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            +    EAK +F EM + GV PN  ++  ++D L K G + EA  L   M+  G+  D  
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            Y  L+DG    G  N+A+++F  +          +YS LI+G+CK  ++     L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             K I P+V++++++  G  +   +  A  +  +M +  +  + + Y T IDG  K    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A++LF  ++    E +    +S ++ L +SGR+E A ELF+ +    L+P+ V Y+ M
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK-MKEIN 444
           + G    G+   A ++  +M E +   +V+ +++LI G  ++ +     E  H  M+++ 
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES--ESFHTGMRQLG 431

Query: 445 VMPDASIVSIVVDLLAK 461
           + PD++  + +++   K
Sbjct: 432 LAPDSATFNTMINAYCK 448



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 235/464 (50%), Gaps = 8/464 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S    +L  +      PD VT+ +L+ G C    +  A  L  ++ +   EP+V TY
Sbjct: 31  GEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITY 90

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++  C++     AL +++EM   +        P+ VTYT I++GLCK G V++AK +
Sbjct: 91  TTLIDAYCKSQCLEDALYMYDEMTVKS------LVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M++  + PN  +Y ++I       +  EA  L   M+ +G+  +VV +  +MD L K
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G  + A  +  ++++  + P+  TY+ L+DG C  G VN  + L   ME       V  
Sbjct: 205 AGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIV 264

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +++GY K   +  A+ +  +M+ + I P+V ++ TL  G F+  Q   A  LF EM+
Sbjct: 265 YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMK 324

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  + +   +F++ L ++G + EA ELF  +       D   Y S++DG  K+G+  
Sbjct: 325 SRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKES 384

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  + + +       +VV Y+++I GL   G+ + +      M +  + P+  TF+ +I
Sbjct: 385 DAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMI 443

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD-LLAKNEI 464
             + +       ++LL++MK   + P++   +I+V  L A  EI
Sbjct: 444 NAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 228/463 (49%), Gaps = 7/463 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V+ G ++L  + +    P+ + ++S++ G   +  + EA  +  K+      P+VF 
Sbjct: 240 LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFV 299

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G  +     +AL+LF+EM +         E N     + ++ L + G +++A E
Sbjct: 300 YGTLIDGYFKADQRGIALDLFKEMKSRG------LEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M  + + P+ V YTS++ GF  A   ++A  +  EM ++    +VV +NV+++ L 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK  E+      M Q G+ PD+ T+NT+++ +C  G + +A +L   M+S G K    
Sbjct: 414 KLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSI 472

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +IL+   C   EIE  + L ++ML  G  P    H  +     +  + +      D++
Sbjct: 473 TCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQL 532

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  D  TY T I   C+ G I  A  +F  +       DI  YN+LI G C S  L
Sbjct: 533 VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHL 592

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +   +    + PNV TY+I++GGL     + +A  L   M+E  +VPN  T+D+L
Sbjct: 593 KKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDIL 652

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + G  +I    + ++L  +M     +P     ++++   AK +
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGK 695



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 170/293 (58%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           ++ +V  FNV++D  C+NG++  A  LL+ M   G  PD  TYNTL++GFC  G +  AK
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +L   +  +  +  V +Y+ LI+ YCK++ +E AL +Y EM  K + PDVV +  +  GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +  +VE A  +F EM+  GV  + ++Y T ID L K G + EA  L   + +    FD+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y +L+DGL K+G    A ++F+ L    LVPN VTYS +I G C  G ++K   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           MEE  + PNVI +  ++ G+ +    ++ ++++ KM + N++P+  +   ++D
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 194/425 (45%), Gaps = 40/425 (9%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           S +  L    R+ EA  LF  +   G  PD   YT++++G  +      A N+ +EM   
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 88  NGEFGVVC----------------------------EPNTVTYTTIIDGLCKEGFVDKAK 119
           +  F VV                              P++ T+ T+I+  CKEG +  A 
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNAL 456

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +LL +MK   +KPN +T   +++  C A +  +   L  +M+  G  P   T   ++D  
Sbjct: 457 KLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDAS 516

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K+ + D      D ++  GV+ D  TYNTL+  FC  G +  A  +F  M   G    +
Sbjct: 517 SKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADI 576

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+GYC +  ++ A +++S+ML++G+ P+V  +N L  GL     ++ A  L ++
Sbjct: 577 ITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQ 636

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+  G+  +  TY   + G  K G + E V+L+  +         R YN LI    K  +
Sbjct: 637 MKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKK 696

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGG---LCNDGQMDK---------ARDLFLDMEE 407
           +  A EL + +    + PN  TY I+I G   L    +++K         A+ LF +M E
Sbjct: 697 MSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNE 756

Query: 408 NAVVP 412
              +P
Sbjct: 757 KGFIP 761



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 165/333 (49%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I+ +V  +  +I G+C   + + A  L   M  +G  P++VT+N +M+  CK G +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           +L+  +    + P+  TY TL+D +C +  +  A  ++  M        V +Y+ ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK+ ++E A S++ EM   G+ P+   + TL   LF+   V  AF L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   +DGL K G    A ++F  L       +   Y++LIDG CK G +     L + 
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + PNV+ YS ++ G    G +++A D+   M +  ++PNV  +  LI G+ + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               ++L  +MK   +  +  ++   V+ L ++
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRS 345



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 35/239 (14%)

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           + +V  +++LI+GYC+N EI                                    RA +
Sbjct: 14  RRSVEHFNVLIDGYCRNGEIS-----------------------------------RAVE 38

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L + M+  G A D  TY T ++G CK G +  A +L   + ++  E ++  Y +LID  C
Sbjct: 39  LLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYC 98

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS  LE AL ++  +    LVP+VVTY+ ++ GLC  G++++A+ +F +MEE  VVPN  
Sbjct: 99  KSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRF 158

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
           ++  LI    +    ++   L  +M    +  D  + + ++D L K  ++ N+   F V
Sbjct: 159 SYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQV 217



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 18/203 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            +   F V  ++L    +P+  T+  L+ GL A   I EAA L  +++  G  P+  TY 
Sbjct: 591 HLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYD 650

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LV+G  +  +    + L+ EM       G V  P T TY  +I    K   + +AKEL+
Sbjct: 651 ILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTRTYNVLISCFAKGKKMSQAKELM 704

Query: 123 LQMKDKNIKPNVVTYTSVIRGF-----------CYAKDWN-EAKRLFIEMMDQGVQPNVV 170
            +M+ + I PN  TY  +I G+              + +  EAKRLF EM ++G  P   
Sbjct: 705 QEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCEN 764

Query: 171 TFNVIMDELCKNGKMDEASRLLD 193
           T   I   L K GK  +A R+L+
Sbjct: 765 TLACISFTLAKPGKKADAQRILN 787


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 224/457 (49%), Gaps = 9/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++ G+++L  + K    P+ VT+ +LI G   E +++ A+ L  ++  FG  P+  T+ 
Sbjct: 318 RIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFN 377

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            L++G     +   AL +F  M A G         P+ V+Y  ++DGLCK    D A+  
Sbjct: 378 ALIDGHISEGNFKEALKMFYMMEAKG-------LTPSEVSYGVLLDGLCKNAEFDLARGF 430

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            ++MK   +    +TYT +I G C     +EA  L  EM   G+ P++VT++ +++  CK
Sbjct: 431 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 490

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+   A  ++  + + G+ P+   Y+TL+   C  G +  A  ++ +M   G     F+
Sbjct: 491 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++L+   CK  ++  A      M S GI P+ V  + L  G     +  +AF +FDEM 
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G     +TY + + GLCK G++ EA +   +L  +    D   YN+L+  +CKSG L 
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA-VVPNVITFDML 420
            A+ LF  +    ++P+  TY+ +I GLC  G+   A     + E    V+PN + +   
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + G  +  +    I    +M  +   PD    + ++D
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 214/431 (49%), Gaps = 9/431 (2%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +LK    PD  TF  LI  LCAE    +++ L  K+   G  P + TY T+++  C+
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 A+ L + M +     GV  + +  TY  +I  LC+   + K   LL  M+ + I
Sbjct: 281 KGRFKAAIELLDHMKSK----GV--DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PN VTY ++I GF        A +L  EM+  G+ PN VTFN ++D     G   EA +
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 394

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +  +M   G+ P   +Y  LLDG C     + A+  ++ M+  G      +Y+ +I+G C
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 454

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           KN  ++ A+ L +EM   GI PD+V ++ L  G  ++ + + A ++   + R G++ +  
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            Y T I   C+ G + EA+ ++  + +     D   +N L+  LCK+G++  A E  R +
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR---I 427
               ++PN V++  +I G  N G+  KA  +F +M +    P   T+  L++G  +   +
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634

Query: 428 NEPSKVIELLH 438
            E  K ++ LH
Sbjct: 635 REAEKFLKSLH 645



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 231/481 (48%), Gaps = 42/481 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S  F  L    + C +  +V +  LI+    E  I ++  +F  + ++G  P V+T 
Sbjct: 143 GKSSFVFGALMTTYRLCNSNPSV-YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 201

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++  + ++   +   +  +EM         +C P+  T+  +I+ LC EG  +K+  L
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 255

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+     P +VTY +V+  +C    +  A  L   M  +GV  +V T+N+++ +LC+
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + ++ +   LL  M +  + P+  TYNTL++GF   G+V  A +L   M S G      +
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+G+      + AL ++  M +KG+ P  V +  L  GL +  + + A   +  M+
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           RNGV     TY   IDGLCKNG++ EAV L + +     + DI  Y++LI+G CK GR +
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495

Query: 362 IALELFRSL------PCGVLVPNVV-----------------------------TYSIMI 386
            A E+   +      P G++   ++                             T+++++
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             LC  G++ +A +    M  + ++PN ++FD LI G+    E  K   +  +M ++   
Sbjct: 556 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 615

Query: 447 P 447
           P
Sbjct: 616 P 616



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 201/443 (45%), Gaps = 7/443 (1%)

Query: 21   PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
            P+ V+F  LI G       ++A ++F ++   G  P  FTY +L+ GLC+  H   A   
Sbjct: 581  PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640

Query: 81   FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             + +        V    +TV Y T++  +CK G + KA  L  +M  ++I P+  TYTS+
Sbjct: 641  LKSL------HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694

Query: 141  IRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
            I G C       A     E   +G V PN V +   +D + K G+        + M   G
Sbjct: 695  ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754

Query: 200  VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
              PD  T N ++DG+   G++    +L   M +      + +Y+IL++GY K K++  + 
Sbjct: 755  HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814

Query: 260  SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
             LY  ++  GI PD +  ++L +G+ E + +E   K+       GV  D +T+   I   
Sbjct: 815  LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874

Query: 320  CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            C NG I  A +L   +  L    D    ++++  L ++ R + +  +   +    + P  
Sbjct: 875  CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934

Query: 380  VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
              Y  +I GLC  G +  A  +  +M  + + P  +    ++R   +  +  +   LL  
Sbjct: 935  RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 994

Query: 440  MKEINVMPDASIVSIVVDLLAKN 462
            M ++ ++P  +  + ++ L  KN
Sbjct: 995  MLKMKLVPTIASFTTLMHLCCKN 1017



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 209/469 (44%), Gaps = 78/469 (16%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            D V + +L+  +C    + +A +LF ++      PD +TYT+L++GLCR   T++A+   
Sbjct: 652  DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711

Query: 82   EEM-ANGN------------------GEF--GVVCE---------PNTVTYTTIIDGLCK 111
            +E  A GN                  G++  G+            P+ VT   +IDG  +
Sbjct: 712  KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771

Query: 112  EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
             G ++K  +LL +M ++N  PN+ TY  ++ G+   KD + +  L+  ++  G+ P+ +T
Sbjct: 772  MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831

Query: 172  FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
             + ++  +C++  ++   ++L   I  GV  D +T+N L+   C  G +N A +L   M 
Sbjct: 832  CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891

Query: 232  SMG-------CKHTVF----------------------------SYSILINGYCKNKEIE 256
            S+G       C   V                              Y  LING C+  +I+
Sbjct: 892  SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951

Query: 257  GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
             A  +  EM++  I P  V  + +   L +  + + A  L   M +  +     ++ T +
Sbjct: 952  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011

Query: 317  DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
               CKNG ++EA+EL   +     + D+ +YN LI GLC  G + +A EL+  +     +
Sbjct: 1012 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1071

Query: 377  PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
             N  TY  +I GL             L  E      ++I  D+L RGFI
Sbjct: 1072 ANATTYKALIRGL-------------LARETAFSGADIILKDLLARGFI 1107



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 204/450 (45%), Gaps = 7/450 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      ++ RI +   +P+ + +++LI   C    + EA  ++  + + G   D FT
Sbjct: 491 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  LV  LC+      A    EE        G++  PNTV++  +I+G    G   KA  
Sbjct: 551 FNVLVTSLCKAGKVAEA----EEFMRCMTSDGIL--PNTVSFDCLINGYGNSGEGLKAFS 604

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M      P   TY S+++G C      EA++    +       + V +N ++  +C
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 664

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTV 239
           K+G + +A  L   M+Q  + PD++TY +L+ G C  G+   A       E+ G      
Sbjct: 665 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+  ++G  K  + +  +    +M + G  PD+V  N +  G   + ++E+   L  E
Sbjct: 725 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 784

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M       +  TY   + G  K   +  +  L+ ++ +     D    +SL+ G+C+S  
Sbjct: 785 MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 844

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LEI L++ ++  C  +  +  T++++I   C +G+++ A DL   M    +  +  T D 
Sbjct: 845 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 904

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           ++    R +   +   +LH+M +  + P++
Sbjct: 905 MVSVLNRNHRFQESRMVLHEMSKQGISPES 934



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 6/144 (4%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +G +   FVV   ++     P  V  +++++ L    +  EA  L   +      P + +
Sbjct: 947  VGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 1006

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            +TTL++  C+  + I AL L   M+N   +       + V+Y  +I GLC +G +  A E
Sbjct: 1007 FTTLMHLCCKNGNVIEALELRVVMSNCGLKL------DLVSYNVLITGLCAKGDMALAFE 1060

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGF 144
            L  +MK      N  TY ++IRG 
Sbjct: 1061 LYEEMKGDGFLANATTYKALIRGL 1084


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 218/437 (49%), Gaps = 13/437 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R+   ++V   + +  F P+  T+  L+K LC  +++  A  L  ++   GC PD  +YT
Sbjct: 161 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYT 220

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+++ +C          L E             EP    Y  +I+GLCKE     A EL+
Sbjct: 221 TVISSMCEVGLVKEGRELAERF-----------EPVVSVYNALINGLCKEHDYKGAFELM 269

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M +K I PNV++Y+++I   C +     A     +M+ +G  PN+ T + ++      
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329

Query: 183 GKMDEASRLLDLMIQ-HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           G   +A  L + MI+  G++P+   YNTL+ GFC  G +  A  +F  ME +GC   + +
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y  LING+ K   ++GA+ ++++ML+ G  P+VV++  +   L    + + A  L + M 
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRL 360
           +   A    T+  FI GLC  G +  A ++F  + +  +C  +I  YN L+DGL K+ R+
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A  L R +    +  +  TY+ ++ G CN G    A  L   M  +   P+ IT +M+
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569

Query: 421 IRGFIRINEPSKVIELL 437
           I  + +  +  +  ++L
Sbjct: 570 ILAYCKQGKAERAAQML 586



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 225/441 (51%), Gaps = 19/441 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    +  ++  L  E+RI     ++  ++  G EP+VFTY  L+  LC+ +    A  L
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM+N        C P+ V+YTT+I  +C+ G V + +EL      +  +P V  Y ++
Sbjct: 204 LVEMSNKG------CCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNAL 252

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C   D+  A  L  EM+++G+ PNV++++ +++ LC +G+++ A   L  M++ G 
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            P+ +T ++L+ G  L G    A +L+  M    G +  V +Y+ L+ G+C +  I  A+
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
           S++S M   G  P++  + +L  G  +   ++ A  ++++M  +G   +   Y   ++ L
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP----CGVL 375
           C++    EA  L   +    C   +  +N+ I GLC +GRL+ A ++FR +     C   
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP-- 490

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PN+VTY+ ++ GL    ++++A  L  ++    V  +  T++ L+ G      P   ++
Sbjct: 491 -PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549

Query: 436 LLHKMKEINVMPDASIVSIVV 456
           L+ KM      PD   +++++
Sbjct: 550 LVGKMMVDGKSPDEITMNMII 570



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 198/391 (50%), Gaps = 13/391 (3%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
            A  +F +++ FGC+P V  Y  +++ L   +   +   ++ +M     E      PN  
Sbjct: 129 RAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE------PNVF 182

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           TY  ++  LCK   VD AK+LL++M +K   P+ V+YT+VI   C      E + L    
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL---- 238

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
             +  +P V  +N +++ LCK      A  L+  M++ G+ P+  +Y+TL++  C +G++
Sbjct: 239 -AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNT 279
             A      M   GC   +++ S L+ G         AL L+++M+   G++P+VV +NT
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G      + +A  +F  M+  G + +  TY + I+G  K G +  AV +++ +    
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C  ++  Y ++++ LC+  + + A  L   +      P+V T++  I GLC+ G++D A 
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477

Query: 400 DLFLDME-ENAVVPNVITFDMLIRGFIRINE 429
            +F  ME ++   PN++T++ L+ G  + N 
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 203/399 (50%), Gaps = 9/399 (2%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F ++  +++   +P+ +++++LI  LC   +I  A +  T++   GC P+++T ++LV 
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           G      T  AL+L+ +M  G   FG+  +PN V Y T++ G C  G + KA  +   M+
Sbjct: 325 GCFLRGTTFDALDLWNQMIRG---FGL--QPNVVAYNTLVQGFCSHGNIVKAVSVFSHME 379

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           +    PN+ TY S+I GF      + A  ++ +M+  G  PNVV +  +++ LC++ K  
Sbjct: 380 EIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFK 439

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTVFSYSIL 245
           EA  L+++M +    P   T+N  + G C  GR++ A+++F  ME    C   + +Y+ L
Sbjct: 440 EAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNEL 499

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ++G  K   IE A  L  E+  +G++     +NTL  G         A +L  +M  +G 
Sbjct: 500 LDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK 559

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSGRLEIA 363
           + D  T    I   CK G    A ++   +   + ++  D+ +Y ++I GLC+S   E  
Sbjct: 560 SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           + L   +    +VP++ T+S++I     D  + +A D F
Sbjct: 620 VILLERMISAGIVPSIATWSVLINCFILD-DIVRAHDQF 657



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 210/449 (46%), Gaps = 21/449 (4%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFT--KLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           F    +TF  +I+ L  + ++     L    KL+ F C  D+F   ++++   +      
Sbjct: 72  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI--SVISVYRQVGLAER 129

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A+ +F  +     EFG  C+P+   Y  ++D L  E  +     +   MK    +PNV T
Sbjct: 130 AVEMFYRIK----EFG--CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFT 183

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y  +++  C     + AK+L +EM ++G  P+ V++  ++  +C+ G + E   L +   
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF- 242

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
                P    YN L++G C       A EL   M   G    V SYS LIN  C + +IE
Sbjct: 243 ----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN-GVAADTWTYRTF 315
            A S  ++ML +G  P++   ++L  G F       A  L+++M R  G+  +   Y T 
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           + G C +G IV+AV +F  +  + C  +IR Y SLI+G  K G L+ A+ ++  +     
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSK 432
            PNVV Y+ M+  LC   +  +A  L   M +    P+V TF+  I+G     R++   K
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAK 461
           V   + +       P+    + ++D LAK
Sbjct: 479 VFRQMEQQHRCP--PNIVTYNELLDGLAK 505



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 200/423 (47%), Gaps = 10/423 (2%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
           G V  GR L   F P    + +LI GLC E     A  L  ++   G  P+V +Y+TL+N
Sbjct: 230 GLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM- 125
            LC +    +A +   +M          C PN  T ++++ G    G    A +L  QM 
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRG------CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           +   ++PNVV Y ++++GFC   +  +A  +F  M + G  PN+ T+  +++   K G +
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           D A  + + M+  G  P+   Y  +++  C   +   A+ L   M    C  +V +++  
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 463

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKP-DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           I G C    ++ A  ++ +M  +   P ++V +N L  GL + +++E A+ L  E+   G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           V   + TY T + G C  G    A++L   + +     D    N +I   CK G+ E A 
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA 583

Query: 365 ELFRSLPCG--VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           ++   + CG     P+V++Y+ +I GLC     +    L   M    +VP++ T+ +LI 
Sbjct: 584 QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643

Query: 423 GFI 425
            FI
Sbjct: 644 CFI 646



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 190/400 (47%), Gaps = 11/400 (2%)

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           +V  L + S   +AL+ F+ +AN N     + +   +T+  +I  L  +G VD  + LL 
Sbjct: 46  VVKRLRQESCVPLALHFFKSIANSN-----LFKHTPLTFEVMIRKLAMDGQVDSVQYLLQ 100

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           QMK +    +   + SVI  +        A  +F  + + G  P+V  +N ++D L    
Sbjct: 101 QMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGEN 160

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           ++     +   M + G  P+ FTYN LL   C   +V+ AK+L V M + GC     SY+
Sbjct: 161 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYT 220

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            +I+  C     E  L      L++  +P V ++N L  GL + H  + AF+L  EM   
Sbjct: 221 TVISSMC-----EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEK 275

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G++ +  +Y T I+ LC +G I  A      +    C  +I   +SL+ G    G    A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335

Query: 364 LELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           L+L+  +  G  L PNVV Y+ ++ G C+ G + KA  +F  MEE    PN+ T+  LI 
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           GF +       + + +KM      P+  + + +V+ L ++
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 7/250 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +  ++L S   P+ V +T++++ LC  S+  EA +L   +    C P V T+
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
              + GLC       A  +F +M   +      C PN VTY  ++DGL K   +++A  L
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHR-----CPPNIVTYNELLDGLAKANRIEEAYGL 515

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             ++  + ++ +  TY +++ G C A     A +L  +MM  G  P+ +T N+I+   CK
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575

Query: 182 NGKMDEASRLLDLMI--QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            GK + A+++LDL+   +   RPD  +Y  ++ G C +        L   M S G   ++
Sbjct: 576 QGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSI 635

Query: 240 FSYSILINGY 249
            ++S+LIN +
Sbjct: 636 ATWSVLINCF 645


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 224/426 (52%), Gaps = 14/426 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S G  +  R+ K+    D  T+++LI GL     +  A  ++ ++   G  PDV T 
Sbjct: 268 GRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTC 327

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++NGLC+  +      L+EEM       G     N  +Y   + GL + G VD A   
Sbjct: 328 NAMLNGLCKAGNVEECFELWEEM-------GKCSLRNVRSYNIFLKGLFENGKVDDA--- 377

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF--IEMMDQGVQPNVVTFNVIMDEL 179
            + + D  ++ +  TY  V+ G C+    N A ++    E  + G+  +   ++ +++ L
Sbjct: 378 -MMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINAL 436

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CK G++DEA  +++LM + G + ++   N L+DGF    +++ A ++F  M   GC  TV
Sbjct: 437 CKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTV 496

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY+ILING  + +    A    +EML KG KPD++ ++TL  GL+E + ++ A +L+ +
Sbjct: 497 VSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQ 556

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
               G   D   Y   I  LC +G + +A++L+ TLR  KC  ++  +N++++G  K G 
Sbjct: 557 FLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGN 615

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
            E+A +++  +    L P++++Y+I + GLC+ G++  A     D      +P  IT+++
Sbjct: 616 CEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNI 675

Query: 420 LIRGFI 425
           L+R  I
Sbjct: 676 LVRAVI 681



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 246/534 (46%), Gaps = 76/534 (14%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIV 76
           C  P+ V  T L+K         EA  +F  +  VFGC P + ++ TL+N    +     
Sbjct: 73  CPCPEDVPLT-LLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWAR 131

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A N F+              PN  TY  ++  +CK+G  +K + LL  M    + P+ +T
Sbjct: 132 AENFFKYFEAAR------VSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRIT 185

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD-LM 195
           Y ++I G   + D   A  +F EM ++GV+P+VV +N+I+D   K G   +A  + + L+
Sbjct: 186 YGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLL 245

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
            +  V P   +YN ++ G C  GR +   E++  M+    K  +F+YS LI+G  +  ++
Sbjct: 246 REELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDL 305

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR------------- 302
            GA  +Y EM+ +G++PDVV  N +  GL +   VE  F+L++EM +             
Sbjct: 306 GGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFL 365

Query: 303 -----NG------------VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
                NG            + AD+ TY   + GLC NGY+  A+++       +   D+ 
Sbjct: 366 KGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVD 425

Query: 346 --AYNSLIDGLCKSGRLEIA---LEL-------FRSLPCGVLVPN--------------- 378
             AY+SLI+ LCK GRL+ A   +EL       F S  C VL+                 
Sbjct: 426 EFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFR 485

Query: 379 ----------VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
                     VV+Y+I+I GL    +  +A D   +M E    P++IT+  LI G    N
Sbjct: 486 EMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESN 545

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
                + L H+  +    PD  + +IV+  L  +    ++L  ++   Q++ V+
Sbjct: 546 MMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVN 599



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 239/522 (45%), Gaps = 73/522 (13%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    G  +L  +  +  +PD +T+ +LI G+     +  A  +F ++R  G EPDV  Y
Sbjct: 162 GEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCY 221

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++G  +    + A  ++E +      F     P+ V+Y  +I GLCK G   +  E+
Sbjct: 222 NMIIDGFFKRGDFVKAGEMWERLLREELVF-----PSVVSYNVMISGLCKCGRFSEGLEI 276

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +MK    K ++ TY+++I G   A D   A++++ EM+ +GV+P+VVT N +++ LCK
Sbjct: 277 WERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCK 336

Query: 182 ----------------------------------NGKMDEASRLLDLMIQH--------- 198
                                             NGK+D+A  L D +++          
Sbjct: 337 AGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVV 396

Query: 199 ------------------------GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
                                   G+  D F Y++L++  C  GR++ A  +   M   G
Sbjct: 397 HGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRG 456

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           CK      ++LI+G+ K+ +++ A+ ++ EM  KG    VV +N L  GL    +   A+
Sbjct: 457 CKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAY 516

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
              +EM   G   D  TY T I GL ++  +  A+ L+H       + DI  YN +I  L
Sbjct: 517 DCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRL 576

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           C SG++E AL+L+ +L     V N+VT++ ++ G    G  + A  ++  + E+ + P++
Sbjct: 577 CSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDI 635

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           I++++ ++G       +  +  L        +P A   +I+V
Sbjct: 636 ISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILV 677



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 167/350 (47%), Gaps = 10/350 (2%)

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
           ++++ +   +  NEA  +F  M    G  P + +FN +++   ++ +   A         
Sbjct: 82  TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
             V P+  TYN L+   C  G     + L   M   G      +Y  LI G  K+ ++  
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG-VAADTWTYRTFI 316
           AL ++ EM  +G++PDVV +N +  G F+     +A ++++ + R   V     +Y   I
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMI 261

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
            GLCK G   E +E++  ++  + + D+  Y++LI GL ++G L  A +++  +    + 
Sbjct: 262 SGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVR 321

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+VVT + M+ GLC  G +++  +L+ +M + + + NV ++++ ++G     +    + L
Sbjct: 322 PDVVTCNAMLNGLCKAGNVEECFELWEEMGKCS-LRNVRSYNIFLKGLFENGKVDDAMML 380

Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE---EVDE 483
              + E     D++   +VV  L  N     +L      E +E   +VDE
Sbjct: 381 WDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDE 426



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 30/173 (17%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPDVFTY 61
           R    +  +  +L+  + PD +T+++LI GL  ES +M+AA  L+ +    G +PD+  Y
Sbjct: 511 RFREAYDCVNEMLEKGWKPDIITYSTLIGGL-YESNMMDAALRLWHQFLDTGHKPDIIMY 569

Query: 62  TTLVNGLCRTSHTIVALNLFEEMAN-------------------GNGEFGVVC------- 95
             +++ LC +     AL L+  +                     GN E            
Sbjct: 570 NIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILED 629

Query: 96  --EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
             +P+ ++Y   + GLC  G V  A   L     +   P  +T+  ++R   +
Sbjct: 630 ELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAVIF 682


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 234/457 (51%), Gaps = 15/457 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++G I      P+ +T+T+LI   C    + +A  ++ ++ V    PDV TYT ++NGLC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           ++     A ++F EM     E GVV  PN  +Y T+ID L KEG V +A  L  +M  + 
Sbjct: 134 KSGKVEEAKSVFREME----EVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I  +VV YT+++ G   A   N A+ +F  ++++ + PN VT++ ++D  CK G +++  
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M +  + P+   Y++++DG+   G +N A ++   M        VF Y  LI+GY
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  +   AL L+ EM S+G++ +  + ++    L    ++E A +LF +M   G+  D 
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y + +DG  K G   +A  +   +      FD+ AYN LI+GL K G+ E       S
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-----SES 422

Query: 370 LPCGV----LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
              G+    L P+  T++ MI   C +G +  A  L  +M+   + PN IT ++L++   
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
              E  K ++LL+ M  +   P  +    V+D  +K+
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 222/437 (50%), Gaps = 9/437 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  LI G C    I  A  L   ++  G  PD+ TY TL+NG C+      A  L  E++
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
             N       EPN +TYTT+ID  CK   ++ A  +  +M  K++ P+VVTYT ++ G C
Sbjct: 80  LVN------LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            +    EAK +F EM + GV PN  ++  ++D L K G + EA  L   M+  G+  D  
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            Y  L+DG    G  N+A+++F  +          +YS LI+G+CK  ++     L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             K I P+V++++++  G  +   +  A  +  +M +  +  + + Y T IDG  K    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A++LF  ++    E +    +S ++ L +SGR+E A ELF+ +    L+P+ V Y+ M
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK-MKEIN 444
           + G    G+   A ++  +M E +   +V+ +++LI G  ++ +     E  H  M+++ 
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES--ESFHTGMRQLG 431

Query: 445 VMPDASIVSIVVDLLAK 461
           + PD++  + +++   K
Sbjct: 432 LAPDSATFNTMINAYCK 448



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 235/464 (50%), Gaps = 8/464 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S    +L  +      PD VT+ +L+ G C    +  A  L  ++ +   EP+V TY
Sbjct: 31  GEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITY 90

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++  C++     AL +++EM   +        P+ VTYT I++GLCK G V++AK +
Sbjct: 91  TTLIDAYCKSQCLEDALYMYDEMTVKS------LVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M++  + PN  +Y ++I       +  EA  L   M+ +G+  +VV +  +MD L K
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G  + A  +  ++++  + P+  TY+ L+DG C  G VN  + L   ME       V  
Sbjct: 205 AGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIV 264

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +++GY K   +  A+ +  +M+ + I P+V ++ TL  G F+  Q   A  LF EM+
Sbjct: 265 YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMK 324

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  + +   +F++ L ++G + EA ELF  +       D   Y S++DG  K+G+  
Sbjct: 325 SRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKES 384

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  + + +       +VV Y+++I GL   G+ + +      M +  + P+  TF+ +I
Sbjct: 385 DAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMI 443

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD-LLAKNEI 464
             + +       ++LL++MK   + P++   +I+V  L A  EI
Sbjct: 444 NAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 229/463 (49%), Gaps = 7/463 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V+ G ++L  + +    P+ + ++S++ G   +  + EA  +  K+      P+VF 
Sbjct: 240 LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFV 299

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G  +     +AL+LF+EM +         E N     + ++ L + G +++A E
Sbjct: 300 YGTLIDGYFKADQRGIALDLFKEMKSRG------LEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M  + + P+ V YTS++ GF  A   ++A  +  EM ++    +VV +NV+++ L 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK  E+      M Q G+ PD+ T+NT+++ +C  G + +A +L   M+S G K    
Sbjct: 414 KLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSI 472

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +IL+   C   EIE  + L ++ML  G  P    H  +     +  + +    + D++
Sbjct: 473 TCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQL 532

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  D  TY T I   C+ G I  A  +F  +       DI  YN+LI G C S  L
Sbjct: 533 VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHL 592

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +   +    + PNV TY+I++GGL     + +A  L   M+E  +VPN  T+D+L
Sbjct: 593 KKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDIL 652

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + G  +I    + ++L  +M     +P     ++++   AK +
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGK 695



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 170/293 (58%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           ++ +V  FNV++D  C+NG++  A  LL+ M   G  PD  TYNTL++GFC  G +  AK
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +L   +  +  +  V +Y+ LI+ YCK++ +E AL +Y EM  K + PDVV +  +  GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +  +VE A  +F EM+  GV  + ++Y T ID L K G + EA  L   + +    FD+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y +L+DGL K+G    A ++F+ L    LVPN VTYS +I G C  G ++K   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           MEE  + PNVI +  ++ G+ +    ++ ++++ KM + N++P+  +   ++D
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 195/425 (45%), Gaps = 40/425 (9%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           S +  L    R+ EA  LF  +   G  PD   YT++++G  +      A N+ +EM   
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 88  NGEFGVVC----------------------------EPNTVTYTTIIDGLCKEGFVDKAK 119
           +  F VV                              P++ T+ T+I+  CKEG +  A 
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNAL 456

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +LL +MK   +KPN +T   +++  C A +  +   L  +M+  G  P   T   ++D  
Sbjct: 457 KLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDAS 516

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K+ + D    + D ++  GV+ D  TYNTL+  FC  G +  A  +F  M   G    +
Sbjct: 517 SKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADI 576

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+GYC +  ++ A +++S+ML++G+ P+V  +N L  GL     ++ A  L ++
Sbjct: 577 ITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQ 636

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+  G+  +  TY   + G  K G + E V+L+  +         R YN LI    K  +
Sbjct: 637 MKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKK 696

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGG---LCNDGQMDK---------ARDLFLDMEE 407
           +  A EL + +    + PN  TY I+I G   L    +++K         A+ LF +M E
Sbjct: 697 MSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNE 756

Query: 408 NAVVP 412
              +P
Sbjct: 757 KGFIP 761



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 165/333 (49%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I+ +V  +  +I G+C   + + A  L   M  +G  P++VT+N +M+  CK G +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           +L+  +    + P+  TY TL+D +C +  +  A  ++  M        V +Y+ ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK+ ++E A S++ EM   G+ P+   + TL   LF+   V  AF L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   +DGL K G    A ++F  L       +   Y++LIDG CK G +     L + 
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + PNV+ YS ++ G    G +++A D+   M +  ++PNV  +  LI G+ + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               ++L  +MK   +  +  ++   V+ L ++
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRS 345



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 35/239 (14%)

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           + +V  +++LI+GYC+N EI                                    RA +
Sbjct: 14  RRSVEHFNVLIDGYCRNGEIS-----------------------------------RAVE 38

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L + M+  G A D  TY T ++G CK G +  A +L   + ++  E ++  Y +LID  C
Sbjct: 39  LLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYC 98

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS  LE AL ++  +    LVP+VVTY+ ++ GLC  G++++A+ +F +MEE  VVPN  
Sbjct: 99  KSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRF 158

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
           ++  LI    +    ++   L  +M    +  D  + + ++D L K  ++ N+   F V
Sbjct: 159 SYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQV 217



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 18/202 (8%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           +   F V  ++L    +P+  T+  L+ GL A   I EAA L  +++  G  P+  TY  
Sbjct: 592 LKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDI 651

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           LV+G  +  +    + L+ EM       G V  P T TY  +I    K   + +AKEL+ 
Sbjct: 652 LVSGHGKIGNMKECVKLYCEMITK----GFV--PKTRTYNVLISCFAKGKKMSQAKELMQ 705

Query: 124 QMKDKNIKPNVVTYTSVIRGF-----------CYAKDWN-EAKRLFIEMMDQGVQPNVVT 171
           +M+ + I PN  TY  +I G+              + +  EAKRLF EM ++G  P   T
Sbjct: 706 EMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENT 765

Query: 172 FNVIMDELCKNGKMDEASRLLD 193
              I   L K GK  +A R+L+
Sbjct: 766 LACISFTLAKPGKKADAQRILN 787


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 228/463 (49%), Gaps = 15/463 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R +  +++L R+ +   TPD  ++ +LI G   E +I  A  +F ++     +P V T
Sbjct: 312 LKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVAT 371

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMA--------NGNGEFGVVC------EPNTVTYTTII 106
           YT L++G CR   T  A  +  EM             +  + C      +P+ +TY+ +I
Sbjct: 372 YTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALI 431

Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
           +G+CK G + + KE+L +M+   + PN V YT+++  FC A    EA + F+++   G+ 
Sbjct: 432 NGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLV 491

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
            N V  N ++    + G + EA +    M +  +  D  ++N ++D +C  G V  A  +
Sbjct: 492 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 551

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
           + +M   G    + +Y  L+ G C+   +  A      +L K    D    NTL VG+ +
Sbjct: 552 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICK 611

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              ++ A  L ++M    +  DT+TY   +DG CK G IV A+ L   +       D  A
Sbjct: 612 HGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIA 671

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
           Y  L++GL   G+++ A  +F+ + C   L  + + Y+ M+ G    GQ+++   L  +M
Sbjct: 672 YTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNM 731

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            EN V P+  ++++L+ G+I+  + S+ + L   M +  + PD
Sbjct: 732 HENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPD 774



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 223/430 (51%), Gaps = 9/430 (2%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  +F  +I   C    ++EA +++  +   G  PD+ TY +L+ GLC+  H + A    
Sbjct: 528 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 587

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
             +          C  +  T  T++ G+CK G +D+A +L  +M  +NI P+  TYT ++
Sbjct: 588 VYLLEK------ACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 641

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHGV 200
            GFC       A  L   M+++G+ P+ + +  +++ L   G++  AS +  +++ + G+
Sbjct: 642 DGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGL 701

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D   YN++++G+   G++N  + L  +M       +  SY+IL++GY K  ++   L 
Sbjct: 702 YADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLY 761

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM--QRNGVAADTWTYRTFIDG 318
           LY +M+ +GIKPD V +  L  GL E   +E A K  ++M  + +G+      Y   I+ 
Sbjct: 762 LYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINA 821

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            C+ G I  A EL   ++ L       A +S++ GLCK G++E A+ +F S+    +VP 
Sbjct: 822 KCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPT 881

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           + T++ ++ GLC + ++D A  L   ME   +  +V+T+++LI G          ++L  
Sbjct: 882 IATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYE 941

Query: 439 KMKEINVMPD 448
           +MK   ++P+
Sbjct: 942 EMKSKGLLPN 951



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 218/459 (47%), Gaps = 57/459 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++S    +L + +K+C  P+AVT+ +++     + R   A  +   +   G E D++TY
Sbjct: 244 GKLSKAESMLQK-MKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTY 302

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             +++ LC+   +  A  L + M   N        P+  +Y T+I G   EG ++ A  +
Sbjct: 303 NIMIDKLCKLKRSARAYLLLKRMREVN------LTPDECSYNTLIHGFFGEGKINLAIYI 356

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             QM  +++KP+V TYT++I G+C     +EA+R+  EM   GV+P  V+          
Sbjct: 357 FNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVS---------- 406

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
                +A ++L  M+  G+ PD  TY+ L++G C  G ++  KE+   M+  G       
Sbjct: 407 -----KAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVL 461

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE---IHQVER------ 292
           Y+ L+  +CK    + AL  + ++   G+  + VIHN L    +    I + E+      
Sbjct: 462 YTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMS 521

Query: 293 --------------------------AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
                                     AF ++D M R+G   D  TY + + GLC+ G++V
Sbjct: 522 RMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 581

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +A E    L    C  D +  N+L+ G+CK G L+ AL+L   +    ++P+  TY+I++
Sbjct: 582 QAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 641

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
            G C  G++  A  L   M E  +VP+ I +  L+ G +
Sbjct: 642 DGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLV 680



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 224/476 (47%), Gaps = 27/476 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +L  + K+    D  T+  +I  LC   R   A  L  ++R     PD  +Y
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++G        +A+ +F +M   +       +P+  TYT +IDG C+ G  D+A+ +
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQS------LKPSVATYTALIDGYCRNGRTDEARRV 391

Query: 122 LLQMK--------------------DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           L +M+                       I P+V+TY+++I G C     +E K +   M 
Sbjct: 392 LYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 451

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
             GV PN V +  ++   CK G   EA +    + + G+  ++  +N LL  F   G + 
Sbjct: 452 KSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIA 511

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A++    M  M     V S++ +I+ YC+   +  A S+Y  M+  G  PD+  + +L 
Sbjct: 512 EAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLL 571

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL +   + +A +    +     A D  T  T + G+CK+G + EA++L   +      
Sbjct: 572 RGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNIL 631

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D   Y  L+DG CK G++  AL L + +    LVP+ + Y+ ++ GL N+GQ+  A  +
Sbjct: 632 PDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 691

Query: 402 FLDME-ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           F ++  +  +  + I ++ ++ G+++  + +++  L+  M E  V P ++  +I++
Sbjct: 692 FQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILM 747



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 221/455 (48%), Gaps = 24/455 (5%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE-PDVFTYTTLVN 66
           ++ L   L   F  D  T   ++  LC + ++ +A ++  K++   C  P+  TY T++N
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK--NCRLPNAVTYNTILN 272

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
              +      AL + ++M   NG      E +  TY  +ID LCK     +A  LL +M+
Sbjct: 273 WYVKKGRCKSALRILDDMEK-NG-----IEADLYTYNIMIDKLCKLKRSARAYLLLKRMR 326

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
           + N+ P+  +Y ++I GF      N A  +F +M+ Q ++P+V T+  ++D  C+NG+ D
Sbjct: 327 EVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTD 386

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
           EA R+L  M   GVRP                 V+ AK++   M + G    V +YS LI
Sbjct: 387 EARRVLYEMQITGVRPR---------------EVSKAKQILKCMLADGIDPDVITYSALI 431

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           NG CK   I     + S M   G+ P+ V++ TL     +    + A K F ++ R+G+ 
Sbjct: 432 NGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLV 491

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
           A++  +   +    + G I EA +    +  +K  FD+ ++N +ID  C+ G +  A  +
Sbjct: 492 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 551

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           + ++      P++ TY  ++ GLC  G + +A++  + + E A   +  T + L+ G  +
Sbjct: 552 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICK 611

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                + ++L  KM   N++PD    +I++D   K
Sbjct: 612 HGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK 646



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 202/450 (44%), Gaps = 44/450 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V   F V   +++  + PD  T+ SL++GLC    +++A      L    C  D  T 
Sbjct: 543 GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 602

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+ G+C+      AL+L E+M   N        P+T TYT ++DG CK G +  A  L
Sbjct: 603 NTLLVGICKHGTLDEALDLCEKMVTRN------ILPDTYTYTILLDGFCKRGKIVPALIL 656

Query: 122 LLQMKDKNIKPNVVTYT------------------------------------SVIRGFC 145
           L  M +K + P+ + YT                                    S++ G+ 
Sbjct: 657 LQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYL 716

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                NE +RL   M +  V P+  ++N++M    K G++     L   M++ G++PD  
Sbjct: 717 KGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 776

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
           TY  L+ G C  G +  A +    M  E  G +     Y  LIN  C+  +I+GA  L  
Sbjct: 777 TYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKE 836

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           +M + G+ P  V  +++  GL +  +VE A  +F  + R G+     T+ T + GLCK  
Sbjct: 837 DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEF 896

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            I +A  L   +     + D+  YN LI GLC    +  AL+L+  +    L+PN+ TY 
Sbjct: 897 KIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYI 956

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            + G +   G M     L  D+E+  +VP+
Sbjct: 957 TLTGAMYATGTMQDGEKLLKDIEDRGIVPS 986



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 219/490 (44%), Gaps = 67/490 (13%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
           VS    +L  +L     PD +T+++LI G+C    I E   + ++++  G  P+   YTT
Sbjct: 405 VSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTT 464

Query: 64  LVNGLCRTSHTIVALNLFEEM------ANGNGEFGVVCEP-------------------- 97
           LV   C+  H   AL  F ++      AN      ++C                      
Sbjct: 465 LVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMK 524

Query: 98  ---NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
              +  ++  IID  C+ G V +A  +   M      P++ TY S++RG C      +AK
Sbjct: 525 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 584

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
              + ++++    +  T N ++  +CK+G +DEA  L + M+   + PD +TY  LLDGF
Sbjct: 585 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGF 644

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPD 273
           C  G++  A  L   M   G      +Y+ L+NG     +++ A  ++ E++ K G+  D
Sbjct: 645 CKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 704

Query: 274 VVIHNTLFVGLF---EIHQVERAFK--------------------------------LFD 298
            + +N++  G     +I+++ER  +                                L+ 
Sbjct: 705 CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 764

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA--YNSLIDGLCK 356
           +M + G+  D  TYR  I GLC+ G I  AV+    + + +     +   Y +LI+  C+
Sbjct: 765 DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCR 824

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G ++ A EL   +    +VP+ V  S ++ GLC  G++++A  +F  +    +VP + T
Sbjct: 825 VGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIAT 884

Query: 417 FDMLIRGFIR 426
           F  L+ G  +
Sbjct: 885 FTTLMHGLCK 894



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 191/404 (47%), Gaps = 27/404 (6%)

Query: 95  CEP-NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           C+P N  +   +++   KEG V  A   +  M +   K ++ +  +++       + +E 
Sbjct: 155 CDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALV-GINKSEY 213

Query: 154 KRLFI-EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
             LF+ E +D+    +V T N++++ LC  GK+ +A  +L  M ++   P+A TYNT+L+
Sbjct: 214 VWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILN 272

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
            +   GR   A  +   ME  G +  +++Y+I+I+  CK K    A  L   M    + P
Sbjct: 273 WYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTP 332

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D   +NTL  G F   ++  A  +F++M R  +     TY   IDG C+NG   EA  + 
Sbjct: 333 DECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL 392

Query: 333 HTL--------------RILKC------EFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
           + +              +ILKC      + D+  Y++LI+G+CK G +    E+   +  
Sbjct: 393 YEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQK 452

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
             ++PN V Y+ ++   C  G   +A   F+D+  + +V N +  + L+  F R    ++
Sbjct: 453 SGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAE 512

Query: 433 VIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHE 476
             +    M  + +  D +  + ++D   +     N L +F+V++
Sbjct: 513 AEQFKQYMSRMKISFDVASFNCIIDSYCQRG---NVLEAFSVYD 553


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 234/457 (51%), Gaps = 15/457 (3%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           ++G I      P+ +T+T+LI   C    + +A  ++ ++ V    PDV TYT ++NGLC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           ++     A ++F EM     E GVV  PN  +Y T+ID L KEG V +A  L  +M  + 
Sbjct: 134 KSGKVEEAKSVFREME----EVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I  +VV YT+++ G   A   N A+ +F  ++++ + PN VT++ ++D  CK G +++  
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
            LL  M +  + P+   Y++++DG+   G +N A ++   M        VF Y  LI+GY
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
            K  +   AL L+ EM S+G++ +  + ++    L    ++E A +LF +M   G+  D 
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y + +DG  K G   +A  +   +      FD+ AYN LI+GL K G+ E       S
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-----SES 422

Query: 370 LPCGV----LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
              G+    L P+  T++ MI   C +G +  A  L  +M+   + PN IT ++L++   
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482

Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
              E  K ++LL+ M  +   P  +    V+D  +K+
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 222/437 (50%), Gaps = 9/437 (2%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  LI G C    I  A  L   ++  G  PD+ TY TL+NG C+      A  L  E++
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
             N       EPN +TYTT+ID  CK   ++ A  +  +M  K++ P+VVTYT ++ G C
Sbjct: 80  LVN------LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
            +    EAK +F EM + GV PN  ++  ++D L K G + EA  L   M+  G+  D  
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            Y  L+DG    G  N+A+++F  +          +YS LI+G+CK  ++     L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
             K I P+V++++++  G  +   +  A  +  +M +  +  + + Y T IDG  K    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
             A++LF  ++    E +    +S ++ L +SGR+E A ELF+ +    L+P+ V Y+ M
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK-MKEIN 444
           + G    G+   A ++  +M E +   +V+ +++LI G  ++ +     E  H  M+++ 
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES--ESFHTGMRQLG 431

Query: 445 VMPDASIVSIVVDLLAK 461
           + PD++  + +++   K
Sbjct: 432 LAPDSATFNTMINAYCK 448



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 235/464 (50%), Gaps = 8/464 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +S    +L  +      PD VT+ +L+ G C    +  A  L  ++ +   EP+V TY
Sbjct: 31  GEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITY 90

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           TTL++  C++     AL +++EM   +        P+ VTYT I++GLCK G V++AK +
Sbjct: 91  TTLIDAYCKSQCLEDALYMYDEMTVKS------LVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M++  + PN  +Y ++I       +  EA  L   M+ +G+  +VV +  +MD L K
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G  + A  +  ++++  + P+  TY+ L+DG C  G VN  + L   ME       V  
Sbjct: 205 AGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIV 264

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           YS +++GY K   +  A+ +  +M+ + I P+V ++ TL  G F+  Q   A  LF EM+
Sbjct: 265 YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMK 324

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
             G+  + +   +F++ L ++G + EA ELF  +       D   Y S++DG  K+G+  
Sbjct: 325 SRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKES 384

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  + + +       +VV Y+++I GL   G+ + +      M +  + P+  TF+ +I
Sbjct: 385 DAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMI 443

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD-LLAKNEI 464
             + +       ++LL++MK   + P++   +I+V  L A  EI
Sbjct: 444 NAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 229/463 (49%), Gaps = 7/463 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G V+ G ++L  + +    P+ + ++S++ G   +  + EA  +  K+      P+VF 
Sbjct: 240 LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFV 299

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y TL++G  +     +AL+LF+EM +         E N     + ++ L + G +++A E
Sbjct: 300 YGTLIDGYFKADQRGIALDLFKEMKSRG------LEENNFVIDSFVNNLKRSGRMEEADE 353

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L   M  + + P+ V YTS++ GF  A   ++A  +  EM ++    +VV +NV+++ L 
Sbjct: 354 LFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLF 413

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK  E+      M Q G+ PD+ T+NT+++ +C  G + +A +L   M+S G K    
Sbjct: 414 KLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSI 472

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           + +IL+   C   EIE  + L ++ML  G  P    H  +     +  + +    + D++
Sbjct: 473 TCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQL 532

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              GV  D  TY T I   C+ G I  A  +F  +       DI  YN+LI G C S  L
Sbjct: 533 VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHL 592

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +   +    + PNV TY+I++GGL     + +A  L   M+E  +VPN  T+D+L
Sbjct: 593 KKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDIL 652

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           + G  +I    + ++L  +M     +P     ++++   AK +
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGK 695



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 170/293 (58%)

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
           ++ +V  FNV++D  C+NG++  A  LL+ M   G  PD  TYNTL++GFC  G +  AK
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +L   +  +  +  V +Y+ LI+ YCK++ +E AL +Y EM  K + PDVV +  +  GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            +  +VE A  +F EM+  GV  + ++Y T ID L K G + EA  L   + +    FD+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             Y +L+DGL K+G    A ++F+ L    LVPN VTYS +I G C  G ++K   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           MEE  + PNVI +  ++ G+ +    ++ ++++ KM + N++P+  +   ++D
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 195/425 (45%), Gaps = 40/425 (9%)

Query: 28  SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
           S +  L    R+ EA  LF  +   G  PD   YT++++G  +      A N+ +EM   
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 88  NGEFGVVC----------------------------EPNTVTYTTIIDGLCKEGFVDKAK 119
           +  F VV                              P++ T+ T+I+  CKEG +  A 
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNAL 456

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +LL +MK   +KPN +T   +++  C A +  +   L  +M+  G  P   T   ++D  
Sbjct: 457 KLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDAS 516

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            K+ + D    + D ++  GV+ D  TYNTL+  FC  G +  A  +F  M   G    +
Sbjct: 517 SKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADI 576

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y+ LI+GYC +  ++ A +++S+ML++G+ P+V  +N L  GL     ++ A  L ++
Sbjct: 577 ITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQ 636

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M+  G+  +  TY   + G  K G + E V+L+  +         R YN LI    K  +
Sbjct: 637 MKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKK 696

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGG---LCNDGQMDK---------ARDLFLDMEE 407
           +  A EL + +    + PN  TY I+I G   L    +++K         A+ LF +M E
Sbjct: 697 MSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNE 756

Query: 408 NAVVP 412
              +P
Sbjct: 757 KGFIP 761



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 165/333 (49%)

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           I+ +V  +  +I G+C   + + A  L   M  +G  P++VT+N +M+  CK G +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
           +L+  +    + P+  TY TL+D +C +  +  A  ++  M        V +Y+ ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
           CK+ ++E A S++ EM   G+ P+   + TL   LF+   V  AF L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
             Y   +DGL K G    A ++F  L       +   Y++LIDG CK G +     L + 
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
           +    + PNV+ YS ++ G    G +++A D+   M +  ++PNV  +  LI G+ + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
               ++L  +MK   +  +  ++   V+ L ++
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRS 345



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 35/239 (14%)

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
           + +V  +++LI+GYC+N EI                                    RA +
Sbjct: 14  RRSVEHFNVLIDGYCRNGEIS-----------------------------------RAVE 38

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L + M+  G A D  TY T ++G CK G +  A +L   + ++  E ++  Y +LID  C
Sbjct: 39  LLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYC 98

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           KS  LE AL ++  +    LVP+VVTY+ ++ GLC  G++++A+ +F +MEE  VVPN  
Sbjct: 99  KSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRF 158

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
           ++  LI    +    ++   L  +M    +  D  + + ++D L K  ++ N+   F V
Sbjct: 159 SYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQV 217



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 18/211 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            +   F V  ++L    +P+  T+  L+ GL A   I EAA L  +++  G  P+  TY 
Sbjct: 591 HLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYD 650

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LV+G  +  +    + L+ EM       G V  P T TY  +I    K   + +AKEL+
Sbjct: 651 ILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTRTYNVLISCFAKGKKMSQAKELM 704

Query: 123 LQMKDKNIKPNVVTYTSVIRGF-----------CYAKDWN-EAKRLFIEMMDQGVQPNVV 170
            +M+ + I PN  TY  +I G+              + +  EAKRLF EM ++G  P   
Sbjct: 705 QEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCEN 764

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
           T   I   L K GK  +A R+L+ + +  V+
Sbjct: 765 TLACISFTLAKPGKKADAQRILNKLYKKKVK 795


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 211/423 (49%), Gaps = 7/423 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  +F +L+ G C E R  EA AL   +   G   D  T T +V   CR        +L
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F  M+    E G    PN V Y+  IDGLC+ G+V +A  +L +M  K +KPNV T+TS+
Sbjct: 239 FRRMS----EMGT--PPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSL 292

Query: 141 IRGFCYAKDWNEAKRLFIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G C       A RLF++++     +PNV T+ V++   CK GK+  A  LL  M++ G
Sbjct: 293 IDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 352

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
           + P+  TY TL+ G C  G  + A EL   M+  G    +++Y+ +I G+CK  +I+ A 
Sbjct: 353 LAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAY 412

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +     S+G+  D V +  L     +   +  A  LF +M       D  TY T I   
Sbjct: 413 KVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMY 472

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C+   + ++ +LF     +      + Y S+I G C+ G+L  AL++F  +     +P+ 
Sbjct: 473 CQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDS 532

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
           +TY  +I  LC + ++++AR LF  M +  +VP  +T   L   + R ++ +  +  L +
Sbjct: 533 ITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDR 592

Query: 440 MKE 442
           + +
Sbjct: 593 LDK 595



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 209/424 (49%), Gaps = 14/424 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      +L  +    F  D+ T T +++  C + R      LF ++   G  P++  Y
Sbjct: 195 GRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNY 254

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           +  ++GLC   +   A ++ EEM  G G      +PN  T+T++IDGLCK G++++A  L
Sbjct: 255 SAWIDGLCERGYVKQAFHVLEEMV-GKG-----LKPNVYTHTSLIDGLCKIGWMERAFRL 308

Query: 122 LLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L++ K  + KPNV TYT +I G+C       A+ L   M++QG+ PN  T+  ++   C
Sbjct: 309 FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHC 368

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G  D A  L++ M   G  P+ +TYN ++ GFC  G++  A ++     S G      
Sbjct: 369 KGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKV 428

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ILI  +CK   I  AL L+ +M  K   PD+  + T+     +  Q+E++ +LFD+ 
Sbjct: 429 TYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKC 488

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
              G+     TY + I G C+ G +  A+++F  +    C  D   Y +LI  LCK  RL
Sbjct: 489 LSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRL 548

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF--LDMEENAVVPNVITFD 418
           E A  LF ++    LVP  VT   +    C   ++  A      LD  + A      T D
Sbjct: 549 EEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQQA-----HTAD 603

Query: 419 MLIR 422
            L+R
Sbjct: 604 ALVR 607



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 203/417 (48%), Gaps = 10/417 (2%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCK 111
           G  PD  ++  LV G CR      A  L   M A G       C  ++ T T ++   C+
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQG------FCL-DSATCTVVVRAFCR 228

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
           +G      +L  +M +    PN+V Y++ I G C      +A  +  EM+ +G++PNV T
Sbjct: 229 QGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYT 288

Query: 172 FNVIMDELCKNGKMDEASRL-LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
              ++D LCK G M+ A RL L L+     +P+  TY  ++ G+C  G++  A+ L   M
Sbjct: 289 HTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRM 348

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G      +Y+ LI+G+CK    + A  L ++M  +G  P++  +N +  G  +  ++
Sbjct: 349 VEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKI 408

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
           + A+K+       G+  D  TY   I   CK G+I  A++LF  +    C  DI  Y ++
Sbjct: 409 QEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTI 468

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I   C+  ++E + +LF       LVP   TY+ MI G C  G++  A  +F  M ++  
Sbjct: 469 IAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGC 528

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP-DASIVSIVVDLLAKNEISL 466
           +P+ IT+  LI    + +   +   L   M + +++P D + V++  +   +++I++
Sbjct: 529 LPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITI 585



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 166/367 (45%), Gaps = 10/367 (2%)

Query: 1   MGRVSHGFVVLGRILKSC-FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
           +G +   F +  +++KS  + P+  T+T +I G C E ++  A  L  ++   G  P+  
Sbjct: 299 IGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           TYTTL++G C+      A  L  +M       G +  PN  TY  II G CK+G + +A 
Sbjct: 359 TYTTLIHGHCKGGSFDRAFELMNKMKLE----GFL--PNIYTYNAIIGGFCKKGKIQEAY 412

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           ++L     + +  + VTYT +I   C       A  LF +M ++   P++ T+  I+   
Sbjct: 413 KVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMY 472

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C+  +M+++ +L D  +  G+ P   TY +++ G+C  G++  A ++F  M   GC    
Sbjct: 473 CQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDS 532

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            +Y  LI+  CK   +E A +L+  ML K + P  V   TL        ++  A    D 
Sbjct: 533 ITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDR 592

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           + +   A    T    +  L   G +  A      +       D   Y S I+   +S R
Sbjct: 593 LDKRQQA---HTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNR 649

Query: 360 LEIALEL 366
             +A E+
Sbjct: 650 YALASEI 656


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 224/457 (49%), Gaps = 9/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++ G+++L  + K    P+ VT+ +LI G   E +++ A+ L  ++  FG  P+  T+ 
Sbjct: 278 RIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFN 337

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            L++G     +   AL +F  M A G         P+ V+Y  ++DGLCK    D A+  
Sbjct: 338 ALIDGHISEGNFKEALKMFYMMEAKG-------LTPSEVSYGVLLDGLCKNAEFDLARGF 390

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            ++MK   +    +TYT +I G C     +EA  L  EM   G+ P++VT++ +++  CK
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 450

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+   A  ++  + + G+ P+   Y+TL+   C  G +  A  ++ +M   G     F+
Sbjct: 451 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 510

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++L+   CK  ++  A      M S GI P+ V  + L  G     +  +AF +FDEM 
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G     +TY + + GLCK G++ EA +   +L  +    D   YN+L+  +CKSG L 
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA-VVPNVITFDML 420
            A+ LF  +    ++P+  TY+ +I GLC  G+   A     + E    V+PN + +   
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + G  +  +    I    +M  +   PD    + ++D
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 727



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 214/431 (49%), Gaps = 9/431 (2%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +LK    PD  TF  LI  LCAE    +++ L  K+   G  P + TY T+++  C+
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 A+ L + M +     GV  + +  TY  +I  LC+   + K   LL  M+ + I
Sbjct: 241 KGRFKAAIELLDHMKSK----GV--DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PN VTY ++I GF        A +L  EM+  G+ PN VTFN ++D     G   EA +
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +  +M   G+ P   +Y  LLDG C     + A+  ++ M+  G      +Y+ +I+G C
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           KN  ++ A+ L +EM   GI PD+V ++ L  G  ++ + + A ++   + R G++ +  
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            Y T I   C+ G + EA+ ++  + +     D   +N L+  LCK+G++  A E  R +
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR---I 427
               ++PN V++  +I G  N G+  KA  +F +M +    P   T+  L++G  +   +
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594

Query: 428 NEPSKVIELLH 438
            E  K ++ LH
Sbjct: 595 REAEKFLKSLH 605



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 231/481 (48%), Gaps = 42/481 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S  F  L    + C +  +V +  LI+    E  I ++  +F  + ++G  P V+T 
Sbjct: 103 GKSSFVFGALMTTYRLCNSNPSV-YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++  + ++   +   +  +EM         +C P+  T+  +I+ LC EG  +K+  L
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 215

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+     P +VTY +V+  +C    +  A  L   M  +GV  +V T+N+++ +LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + ++ +   LL  M +  + P+  TYNTL++GF   G+V  A +L   M S G      +
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+G+      + AL ++  M +KG+ P  V +  L  GL +  + + A   +  M+
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           RNGV     TY   IDGLCKNG++ EAV L + +     + DI  Y++LI+G CK GR +
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 362 IALELFRSL------PCGVLVPNVV-----------------------------TYSIMI 386
            A E+   +      P G++   ++                             T+++++
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             LC  G++ +A +    M  + ++PN ++FD LI G+    E  K   +  +M ++   
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575

Query: 447 P 447
           P
Sbjct: 576 P 576



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 201/443 (45%), Gaps = 7/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V+F  LI G       ++A ++F ++   G  P  FTY +L+ GLC+  H   A   
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + +        V    +TV Y T++  +CK G + KA  L  +M  ++I P+  TYTS+
Sbjct: 601 LKSL------HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G C       A     E   +G V PN V +   +D + K G+        + M   G
Sbjct: 655 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 714

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD  T N ++DG+   G++    +L   M +      + +Y+IL++GY K K++  + 
Sbjct: 715 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 774

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            LY  ++  GI PD +  ++L +G+ E + +E   K+       GV  D +T+   I   
Sbjct: 775 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 834

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C NG I  A +L   +  L    D    ++++  L ++ R + +  +   +    + P  
Sbjct: 835 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 894

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             Y  +I GLC  G +  A  +  +M  + + P  +    ++R   +  +  +   LL  
Sbjct: 895 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M ++ ++P  +  + ++ L  KN
Sbjct: 955 MLKMKLVPTIASFTTLMHLCCKN 977



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 207/470 (44%), Gaps = 80/470 (17%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            D V + +L+  +C    + +A +LF ++      PD +TYT+L++GLCR   T++A+ LF
Sbjct: 612  DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LF 670

Query: 82   EEMANGNG----------------------EFGVVCE---------PNTVTYTTIIDGLC 110
             + A   G                      + G+            P+ VT   +IDG  
Sbjct: 671  AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 730

Query: 111  KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
            + G ++K  +LL +M ++N  PN+ TY  ++ G+   KD + +  L+  ++  G+ P+ +
Sbjct: 731  RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 790

Query: 171  TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            T + ++  +C++  ++   ++L   I  GV  D +T+N L+   C  G +N A +L   M
Sbjct: 791  TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 850

Query: 231  ESMG-------CKHTVF----------------------------SYSILINGYCKNKEI 255
             S+G       C   V                              Y  LING C+  +I
Sbjct: 851  TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 910

Query: 256  EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
            + A  +  EM++  I P  V  + +   L +  + + A  L   M +  +     ++ T 
Sbjct: 911  KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970

Query: 316  IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
            +   CKNG ++EA+EL   +     + D+ +YN LI GLC  G + +A EL+  +     
Sbjct: 971  MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1030

Query: 376  VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
            + N  TY  +I GL             L  E      ++I  D+L RGFI
Sbjct: 1031 LANATTYKALIRGL-------------LARETAFSGADIILKDLLARGFI 1067



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 204/450 (45%), Gaps = 7/450 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      ++ RI +   +P+ + +++LI   C    + EA  ++  + + G   D FT
Sbjct: 451 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 510

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  LV  LC+      A    EE        G++  PNTV++  +I+G    G   KA  
Sbjct: 511 FNVLVTSLCKAGKVAEA----EEFMRCMTSDGIL--PNTVSFDCLINGYGNSGEGLKAFS 564

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M      P   TY S+++G C      EA++    +       + V +N ++  +C
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTV 239
           K+G + +A  L   M+Q  + PD++TY +L+ G C  G+   A       E+ G      
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+  ++G  K  + +  +    +M + G  PD+V  N +  G   + ++E+   L  E
Sbjct: 685 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 744

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M       +  TY   + G  K   +  +  L+ ++ +     D    +SL+ G+C+S  
Sbjct: 745 MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LEI L++ ++  C  +  +  T++++I   C +G+++ A DL   M    +  +  T D 
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           ++    R +   +   +LH+M +  + P++
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPES 894



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 6/144 (4%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +G +   FVV   ++     P  V  +++++ L    +  EA  L   +      P + +
Sbjct: 907  VGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 966

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            +TTL++  C+  + I AL L   M+N   +       + V+Y  +I GLC +G +  A E
Sbjct: 967  FTTLMHLCCKNGNVIEALELRVVMSNCGLKL------DLVSYNVLITGLCAKGDMALAFE 1020

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGF 144
            L  +MK      N  TY ++IRG 
Sbjct: 1021 LYEEMKGDGFLANATTYKALIRGL 1044


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 224/457 (49%), Gaps = 9/457 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++ G+++L  + K    P+ VT+ +LI G   E +++ A+ L  ++  FG  P+  T+ 
Sbjct: 278 RIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFN 337

Query: 63  TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            L++G     +   AL +F  M A G         P+ V+Y  ++DGLCK    D A+  
Sbjct: 338 ALIDGHISEGNFKEALKMFYMMEAKG-------LTPSEVSYGVLLDGLCKNAEFDLARGF 390

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            ++MK   +    +TYT +I G C     +EA  L  EM   G+ P++VT++ +++  CK
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 450

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+   A  ++  + + G+ P+   Y+TL+   C  G +  A  ++ +M   G     F+
Sbjct: 451 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 510

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           +++L+   CK  ++  A      M S GI P+ V  + L  G     +  +AF +FDEM 
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G     +TY + + GLCK G++ EA +   +L  +    D   YN+L+  +CKSG L 
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA-VVPNVITFDML 420
            A+ LF  +    ++P+  TY+ +I GLC  G+   A     + E    V+PN + +   
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           + G  +  +    I    +M  +   PD    + ++D
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 727



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 214/431 (49%), Gaps = 9/431 (2%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           L  +LK    PD  TF  LI  LCAE    +++ L  K+   G  P + TY T+++  C+
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                 A+ L + M +     GV  + +  TY  +I  LC+   + K   LL  M+ + I
Sbjct: 241 KGRFKAAIELLDHMKSK----GV--DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PN VTY ++I GF        A +L  EM+  G+ PN VTFN ++D     G   EA +
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +  +M   G+ P   +Y  LLDG C     + A+  ++ M+  G      +Y+ +I+G C
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           KN  ++ A+ L +EM   GI PD+V ++ L  G  ++ + + A ++   + R G++ +  
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            Y T I   C+ G + EA+ ++  + +     D   +N L+  LCK+G++  A E  R +
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR---I 427
               ++PN V++  +I G  N G+  KA  +F +M +    P   T+  L++G  +   +
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594

Query: 428 NEPSKVIELLH 438
            E  K ++ LH
Sbjct: 595 REAEKFLKSLH 605



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 231/481 (48%), Gaps = 42/481 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+ S  F  L    + C +  +V +  LI+    E  I ++  +F  + ++G  P V+T 
Sbjct: 103 GKSSFVFGALMTTYRLCNSNPSV-YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++  + ++   +   +  +EM         +C P+  T+  +I+ LC EG  +K+  L
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 215

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +M+     P +VTY +V+  +C    +  A  L   M  +GV  +V T+N+++ +LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           + ++ +   LL  M +  + P+  TYNTL++GF   G+V  A +L   M S G      +
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI+G+      + AL ++  M +KG+ P  V +  L  GL +  + + A   +  M+
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           RNGV     TY   IDGLCKNG++ EAV L + +     + DI  Y++LI+G CK GR +
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 362 IALELFRSL------PCGVLVPNVV-----------------------------TYSIMI 386
            A E+   +      P G++   ++                             T+++++
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
             LC  G++ +A +    M  + ++PN ++FD LI G+    E  K   +  +M ++   
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575

Query: 447 P 447
           P
Sbjct: 576 P 576



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 201/443 (45%), Gaps = 7/443 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+ V+F  LI G       ++A ++F ++   G  P  FTY +L+ GLC+  H   A   
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            + +        V    +TV Y T++  +CK G + KA  L  +M  ++I P+  TYTS+
Sbjct: 601 LKSL------HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           I G C       A     E   +G V PN V +   +D + K G+        + M   G
Sbjct: 655 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 714

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             PD  T N ++DG+   G++    +L   M +      + +Y+IL++GY K K++  + 
Sbjct: 715 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 774

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            LY  ++  GI PD +  ++L +G+ E + +E   K+       GV  D +T+   I   
Sbjct: 775 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 834

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
           C NG I  A +L   +  L    D    ++++  L ++ R + +  +   +    + P  
Sbjct: 835 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 894

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
             Y  +I GLC  G +  A  +  +M  + + P  +    ++R   +  +  +   LL  
Sbjct: 895 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954

Query: 440 MKEINVMPDASIVSIVVDLLAKN 462
           M ++ ++P  +  + ++ L  KN
Sbjct: 955 MLKMKLVPTIASFTTLMHLCCKN 977



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 209/469 (44%), Gaps = 78/469 (16%)

Query: 22   DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
            D V + +L+  +C    + +A +LF ++      PD +TYT+L++GLCR   T++A+   
Sbjct: 612  DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671

Query: 82   EEM-ANGN------------------GEF--GVVCE---------PNTVTYTTIIDGLCK 111
            +E  A GN                  G++  G+            P+ VT   +IDG  +
Sbjct: 672  KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 731

Query: 112  EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
             G ++K  +LL +M ++N  PN+ TY  ++ G+   KD + +  L+  ++  G+ P+ +T
Sbjct: 732  MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 791

Query: 172  FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
             + ++  +C++  ++   ++L   I  GV  D +T+N L+   C  G +N A +L   M 
Sbjct: 792  CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 851

Query: 232  SMG-------CKHTVF----------------------------SYSILINGYCKNKEIE 256
            S+G       C   V                              Y  LING C+  +I+
Sbjct: 852  SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 911

Query: 257  GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
             A  +  EM++  I P  V  + +   L +  + + A  L   M +  +     ++ T +
Sbjct: 912  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971

Query: 317  DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
               CKNG ++EA+EL   +     + D+ +YN LI GLC  G + +A EL+  +     +
Sbjct: 972  HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1031

Query: 377  PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
             N  TY  +I GL             L  E      ++I  D+L RGFI
Sbjct: 1032 ANATTYKALIRGL-------------LARETAFSGADIILKDLLARGFI 1067



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 204/450 (45%), Gaps = 7/450 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR      ++ RI +   +P+ + +++LI   C    + EA  ++  + + G   D FT
Sbjct: 451 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 510

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           +  LV  LC+      A    EE        G++  PNTV++  +I+G    G   KA  
Sbjct: 511 FNVLVTSLCKAGKVAEA----EEFMRCMTSDGIL--PNTVSFDCLINGYGNSGEGLKAFS 564

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +  +M      P   TY S+++G C      EA++    +       + V +N ++  +C
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHTV 239
           K+G + +A  L   M+Q  + PD++TY +L+ G C  G+   A       E+ G      
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+  ++G  K  + +  +    +M + G  PD+V  N +  G   + ++E+   L  E
Sbjct: 685 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 744

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M       +  TY   + G  K   +  +  L+ ++ +     D    +SL+ G+C+S  
Sbjct: 745 MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           LEI L++ ++  C  +  +  T++++I   C +G+++ A DL   M    +  +  T D 
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           ++    R +   +   +LH+M +  + P++
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPES 894



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 6/144 (4%)

Query: 1    MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
            +G +   FVV   ++     P  V  +++++ L    +  EA  L   +      P + +
Sbjct: 907  VGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 966

Query: 61   YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
            +TTL++  C+  + I AL L   M+N   +       + V+Y  +I GLC +G +  A E
Sbjct: 967  FTTLMHLCCKNGNVIEALELRVVMSNCGLKL------DLVSYNVLITGLCAKGDMALAFE 1020

Query: 121  LLLQMKDKNIKPNVVTYTSVIRGF 144
            L  +MK      N  TY ++IRG 
Sbjct: 1021 LYEEMKGDGFLANATTYKALIRGL 1044


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 226/503 (44%), Gaps = 72/503 (14%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T   L   L     + +A A++ +L+ FG  P+ +TY  ++  LC+       L +
Sbjct: 193 PDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCV 252

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           FEEM       GV+  P++  +   I+GLC     D   E+L   +  N    V  YT+V
Sbjct: 253 FEEME----RVGVI--PHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAV 306

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +RGFC     +EA+ +F +M  QGV P+V  ++ ++   CK+  +  A  L D MI  GV
Sbjct: 307 VRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGV 366

Query: 201 RP-----------------------------------DAFTYNTLLDGFCLTGRVNHAKE 225
           +                                    D   YN + D  C+ G+V  A E
Sbjct: 367 KTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVE 426

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           +   M+S      V  Y+ LINGYC   ++  A +++ EM  KG+KPD+V +N L  GL 
Sbjct: 427 MVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLS 486

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA-----------VELFHT 334
                    KL D M+  G+  ++ T++  I+GLC  G ++EA           +E++  
Sbjct: 487 RNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSA 546

Query: 335 LRILKCEFDI--RAYN------------------SLIDGLCKSGRLEIALELFRSLPCGV 374
           +    CE D+  ++Y                    L+  LC +G +E A++L   +    
Sbjct: 547 MVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSN 606

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + P+ + YS ++  LC  G M  AR LF         P+V+T+ ++I  + R+N   +  
Sbjct: 607 VEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAH 666

Query: 435 ELLHKMKEINVMPDASIVSIVVD 457
           +L   MK   + PD    ++++D
Sbjct: 667 DLFQDMKRRGIKPDVITFTVLLD 689



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 238/528 (45%), Gaps = 81/528 (15%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R   G+ VL    K     +   +T++++G C E ++ EA  +F  +   G  PDV+ Y+
Sbjct: 280 RSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYS 339

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGN---------------GEFGVVCEP---------- 97
           +L++G C++ + + AL L +EM +                 GE G+  E           
Sbjct: 340 SLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKES 399

Query: 98  ----NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
               + V Y  + D LC  G V+ A E++ +MK K +  +V  YT++I G+C   D   A
Sbjct: 400 GMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTA 459

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             +F EM ++G++P++VT+NV+   L +NG   E  +LLD M   G++P++ T+  +++G
Sbjct: 460 FNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEG 519

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK-------------------- 253
            C  G+V  A+  F S+E       +  YS ++NGYC+                      
Sbjct: 520 LCSGGKVLEAEVYFNSLED----KNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAK 575

Query: 254 ---------------EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
                          +IE A+ L   ML   ++P  ++++ +   L +   ++ A  LFD
Sbjct: 576 KASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFD 635

Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK-- 356
                G   D  TY   I+  C+   + EA +LF  ++    + D+  +  L+DG  K  
Sbjct: 636 VFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEY 695

Query: 357 --------SGRLEIAL---ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
                     R   +L    + R +    + P+VV Y++++ G        +A  LF  M
Sbjct: 696 LGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKM 755

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
            E+ + P+ IT+  L+ G        K + LL++M    + PD  I+S
Sbjct: 756 IESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIIS 803



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 176/354 (49%), Gaps = 5/354 (1%)

Query: 74  TIVALNLFEEMAN---GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
           T V+LN+F++  +        G++  P+ +T   + + L + G VDKA  +  Q+K    
Sbjct: 169 TCVSLNMFDKAIDFLFQTRRRGIL--PDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGF 226

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            PN  TY  VI+  C   D  +   +F EM   GV P+   F   ++ LC N + D    
Sbjct: 227 IPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYE 286

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           +L    +     + + Y  ++ GFC   +++ A+ +F  ME  G    V+ YS LI+GYC
Sbjct: 287 VLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYC 346

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           K+  +  AL+L+ EM+S+G+K + V+ + +   L E+         F E++ +G+  D  
Sbjct: 347 KSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGV 406

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
            Y    D LC  G + +AVE+   ++  +   D++ Y +LI+G C  G L  A  +F+ +
Sbjct: 407 AYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEM 466

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
               L P++VTY+++  GL  +G   +   L   ME   + PN  T  M+I G 
Sbjct: 467 KEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGL 520



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 183/381 (48%), Gaps = 23/381 (6%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D   +T+LI G C +  ++ A  +F +++  G +PD+ TY  L  GL R  H    + L 
Sbjct: 439 DVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLL 498

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           + M +         +PN+ T+  II+GLC  G V +A+     ++DKNI+     Y++++
Sbjct: 499 DFMESQG------MKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIE----IYSAMV 548

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G+C      ++  +F+++++QG      +   ++ +LC  G +++A +LLD M+   V 
Sbjct: 549 NGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVE 608

Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
           P    Y+ +L   C  G + +A+ LF      G    V +Y+I+IN YC+   ++ A  L
Sbjct: 609 PSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDL 668

Query: 262 YSEMLSKGIKPDVVIHNTLFVG--------LFEIHQVERAFKLF-----DEMQRNGVAAD 308
           + +M  +GIKPDV+    L  G         F  H   +   L+      +M++  +  D
Sbjct: 669 FQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPD 728

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
              Y   +DG  K     +AV LF  +     E D   Y +L+ GLC  G +E A+ L  
Sbjct: 729 VVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLN 788

Query: 369 SLPCGVLVPNVVTYSIMIGGL 389
            +    + P+V   S +  G+
Sbjct: 789 EMSSKGMTPDVHIISALKRGI 809



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 179/360 (49%), Gaps = 6/360 (1%)

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
           DKA + L Q + + I P+V+T   +        + ++A  ++ ++   G  PN  T+ ++
Sbjct: 177 DKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIV 236

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           +  LCK G + +   + + M + GV P ++ +   ++G C   R +   E+  +      
Sbjct: 237 IKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNA 296

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V++Y+ ++ G+C   +++ A  ++ +M  +G+ PDV ++++L  G  + H + RA  
Sbjct: 297 PLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALA 356

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L DEM   GV  +       +  L + G  +E V+ F  L+      D  AYN + D LC
Sbjct: 357 LHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALC 416

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
             G++E A+E+   +    L  +V  Y+ +I G C  G +  A ++F +M+E  + P+++
Sbjct: 417 MLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIV 476

Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN------EISLNSL 469
           T+++L  G  R     + ++LL  M+   + P+++   ++++ L         E+  NSL
Sbjct: 477 TYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSL 536



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 142/313 (45%), Gaps = 46/313 (14%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P++ T   +I+GLC+  +++EA   F  L     + ++  Y+ +VNG C T     +  +
Sbjct: 508 PNSTTHKMIIEGLCSGGKVLEAEVYFNSLE----DKNIEIYSAMVNGYCETDLVKKSYEV 563

Query: 81  FEEMAN-GNGEFGVVC----------------------------EPNTVTYTTIIDGLCK 111
           F ++ N G+      C                            EP+ + Y+ I+  LC+
Sbjct: 564 FLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQ 623

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G +  A+ L      +   P+VVTYT +I  +C      EA  LF +M  +G++P+V+T
Sbjct: 624 AGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVIT 683

Query: 172 FNVIMD---------ELCKNGKMDEAS----RLLDLMIQHGVRPDAFTYNTLLDGFCLTG 218
           F V++D             +GK    S     +L  M Q  + PD   Y  L+DG   T 
Sbjct: 684 FTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTD 743

Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
               A  LF  M   G +    +Y+ L++G C    +E A++L +EM SKG+ PDV I +
Sbjct: 744 NFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIIS 803

Query: 279 TLFVGLFEIHQVE 291
            L  G+ +  +V+
Sbjct: 804 ALKRGIIKARKVQ 816



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +     +L R+L S   P  + ++ ++  LC    +  A  LF      G  PDV TY
Sbjct: 590 GDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTY 649

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE----GFVDK 117
           T ++N  CR +    A +LF++M           +P+ +T+T ++DG  KE     F   
Sbjct: 650 TIMINSYCRMNCLQEAHDLFQDMKRRG------IKPDVITFTVLLDGSLKEYLGKRFSSH 703

Query: 118 AKE---------LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
            K          +L  M+   I P+VV YT ++ G     ++ +A  LF +M++ G++P+
Sbjct: 704 GKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPD 763

Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
            +T+  ++  LC  G +++A  LL+ M   G+ PD    + L  G     +V   K
Sbjct: 764 TITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIKARKVQFHK 819



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 116/230 (50%), Gaps = 4/230 (1%)

Query: 247 NGYCKN----KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           NG+ K        + A+    +   +GI PDV+  N LF  L E  +V++A  ++++++R
Sbjct: 164 NGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKR 223

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G   + +TY   I  LCK G + + + +F  +  +        + + I+GLC + R ++
Sbjct: 224 FGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDL 283

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
             E+ ++   G     V  Y+ ++ G CN+ ++D+A+ +F DME   VVP+V  +  LI 
Sbjct: 284 GYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIH 343

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
           G+ + +   + + L  +M    V  +  +VS ++  L +  ++L  +  F
Sbjct: 344 GYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQF 393


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 197/379 (51%), Gaps = 15/379 (3%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFE---EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVD 116
           T + ++ GLCR      AL  F+   E+A+         +P+ V+YTT+I+GLCK G VD
Sbjct: 12  TTSIILQGLCRCGRVAQALEHFDASLELAHA--------QPDVVSYTTLINGLCKLGRVD 63

Query: 117 KAKELLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            A +L  +M      +PN  TY +++ G C     + A+ +  E   +   P+VVT+N +
Sbjct: 64  AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           M  L + G++DEA      M + G  P   ++N ++ G C   R+  A E+F  M     
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              + +YS++I+G CK+ +++ A  L   M+S+G +PD+V +  L +G     +++ A  
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
           L   M   G   D  TY   ID LCK G + +A E+F  L   KC  ++  Y++LI G C
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC 303

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
           ++ R++   ++ R + C    PNVVTY+ MI GL    + ++A  +F +M E   VP+  
Sbjct: 304 RASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDAR 360

Query: 416 TFDMLIRGFIRINEPSKVI 434
           T+  L R    I+ P  V+
Sbjct: 361 TYRGLKRALRMIDHPPHVL 379



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 196/360 (54%), Gaps = 11/360 (3%)

Query: 25  TFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
           T + +++GLC   R+ +A   F   L +   +PDV +YTTL+NGLC+      A +LF +
Sbjct: 12  TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71

Query: 84  MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRG 143
           M    G     C PN  TY  ++DGLCK+  +D A+ ++ + + ++  P+VVTY +++  
Sbjct: 72  MVAAGG-----CRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAA 126

Query: 144 FCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPD 203
                  +EA   F +M ++G  P +V+FN I+  LC+  ++ +A  + + MI     P+
Sbjct: 127 LFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPN 186

Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
             TY+ ++DG C + +++ A++L   M S GC+  + +Y+ L+ G+     ++ AL L  
Sbjct: 187 LVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLR 246

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
            M+S+G  PDVV +  +   L ++ +V+ A ++F E+  N  + +  TY   I G C+  
Sbjct: 247 RMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRAS 306

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP-CGVLVPNVVTY 382
            + E  ++   +R + C  ++  YN++I GL    R E A  +FR +  CG  VP+  TY
Sbjct: 307 RVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG-FVPDARTY 362



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 184/354 (51%), Gaps = 5/354 (1%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELL-LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
           N  T + I+ GLC+ G V +A E     ++  + +P+VV+YT++I G C     + A  L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 157 FIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           F +M+  G  +PN  T+N ++D LCK  ++D A  ++    +    PD  TYNTL+    
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             GRV+ A   F  M   G   T+ S++ +I G C+ + +  AL +++EM+ +   P++V
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
            ++ +  GL +  Q++ A +L D M   G   D   Y   + G    G +  A+ L   +
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248

Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
               C  D+  Y  +ID LCK GR++ A E+FR L      PNVVTYS +IGG C   ++
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 308

Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
           D+   +   M E A  PNV+T++ +I G   ++   +   +  +M E   +PDA
Sbjct: 309 DEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 359



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 177/337 (52%), Gaps = 14/337 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           PD V++T+LI GLC   R+  A  LF K+    GC P+ FTY  LV+GLC+      A  
Sbjct: 44  PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARA 103

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           +  E      +F     P+ VTY T++  L + G VD+A     QM ++   P +V++ +
Sbjct: 104 VIAEAR--KRDFA----PDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 157

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           +I G C A+   +A  +F EM+D+   PN+VT++V++D LCK+ ++DEA +LLD M+  G
Sbjct: 158 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 217

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
            RPD   Y  L+ GF   GR++ A  L   M S GC   V +Y+++I+  CK   ++ A 
Sbjct: 218 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAH 277

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            ++ E+++    P+VV ++ L  G     +V+   K+  EM       +  TY T I GL
Sbjct: 278 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGL 334

Query: 320 CKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGL 354
                  EA  +F  +   +C F  D R Y  L   L
Sbjct: 335 SMVDRNEEAYGMFREMS--ECGFVPDARTYRGLKRAL 369



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 166/315 (52%), Gaps = 12/315 (3%)

Query: 1   MGRVSHGFVVLGRILKS--CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDV 58
           +GRV   F +  +++ +  C  P+A T+ +L+ GLC + R+  A A+  + R     PDV
Sbjct: 59  LGRVDAAFDLFRKMVAAGGC-RPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDV 117

Query: 59  FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
            TY TL+  L +      AL  F +M     E G V  P  V++  II GLC+   +  A
Sbjct: 118 VTYNTLMAALFQLGRVDEALATFTQMT----EEGYV--PTLVSFNAIITGLCRARRLADA 171

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
            E+  +M D++  PN+VTY+ VI G C +   +EA++L   M+ +G +P++V +  ++  
Sbjct: 172 LEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLG 231

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
               G++D A  LL  M+  G  PD  TY  ++D  C  GRV+ A E+F  + +  C   
Sbjct: 232 FSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPN 291

Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           V +YS LI GYC+   ++    +  EM     +P+VV +NT+  GL  + + E A+ +F 
Sbjct: 292 VVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFR 348

Query: 299 EMQRNGVAADTWTYR 313
           EM   G   D  TYR
Sbjct: 349 EMSECGFVPDARTYR 363



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 166/324 (51%), Gaps = 42/324 (12%)

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLD--LMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +G+Q N  T ++I+  LC+ G++ +A    D  L + H  +PD  +Y TL++G C  GRV
Sbjct: 4   EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHA-QPDVVSYTTLINGLCKLGRV 62

Query: 221 NHAKELFVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           + A +LF  M  + GC+   F+Y+ L++G CK   ++ A ++ +E   +   PDVV +NT
Sbjct: 63  DAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNT 122

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L   LF++ +V+ A   F +M   G      ++   I GLC+   + +A+E+F+ +    
Sbjct: 123 LMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD 182

Query: 340 CEFDIRAYNSLIDGLCKS-----------------------------------GRLEIAL 364
              ++  Y+ +IDGLCKS                                   GRL+ AL
Sbjct: 183 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSAL 242

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            L R +     +P+VVTY+++I  LC  G++D A ++F ++  N   PNV+T+  LI G+
Sbjct: 243 GLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 302

Query: 425 IRINEPSKVIELLHKMKEINVMPD 448
            R    S+V E    M+E+   P+
Sbjct: 303 CR---ASRVDEGGKVMREMACRPN 323



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 2/186 (1%)

Query: 280 LFVGLFEIHQVERAFKLFD-EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
           +  GL    +V +A + FD  ++      D  +Y T I+GLCK G +  A +LF  +   
Sbjct: 16  ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 75

Query: 339 K-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
             C  +   YN+L+DGLCK  RL+ A  +          P+VVTY+ ++  L   G++D+
Sbjct: 76  GGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDE 135

Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           A   F  M E   VP +++F+ +I G  R    +  +E+ ++M + +  P+    S+V+D
Sbjct: 136 ALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID 195

Query: 458 LLAKNE 463
            L K++
Sbjct: 196 GLCKSD 201



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L R++     PD VT+T +I  LC   R+ +A  +F +L    C P+V TY
Sbjct: 236 GRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTY 295

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+ G CR S       +  EMA         C PN VTY T+I GL      ++A  +
Sbjct: 296 SALIGGYCRASRVDEGGKVMREMA---------CRPNVVTYNTMIWGLSMVDRNEEAYGM 346

Query: 122 LLQMKDKNIKPNVVTYTSVIRGF 144
             +M +    P+  TY  + R  
Sbjct: 347 FREMSECGFVPDARTYRGLKRAL 369


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 178/317 (56%)

Query: 95  CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
           C P+ +TY  +++G+C+EG VD A E L  +     +PN V+Y  V++G   A+ W +A+
Sbjct: 12  CAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAE 71

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +L  EM  +G  PNVVTFN+++  LC+ G ++ A  +L+ + ++G  P++ +YN LL  F
Sbjct: 72  KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAF 131

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C   +++ A      M S GC   + SY+ L+   C+N E++ A+ L  ++  KG  P +
Sbjct: 132 CKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVL 191

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +NT+  GL +  + + A +L DEM   G+  D  TY T   GLC+   I EA+  F  
Sbjct: 192 ISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCK 251

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           ++ +     +  YN+++ GLCK      A++LF  +     +PN  TY+I++ GL  +G 
Sbjct: 252 VQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGL 311

Query: 395 MDKARDLFLDMEENAVV 411
           + +ARDL   +    VV
Sbjct: 312 VKEARDLLGQLCSRGVV 328



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 165/320 (51%), Gaps = 7/320 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C  PD +T+  ++ G+C E R+ +A      L  +G EP+  +Y  ++ GL       
Sbjct: 10  KGC-APDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWE 68

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  L EEMA+        C PN VT+  +I  LC+ G V+ A E+L Q+      PN +
Sbjct: 69  DAEKLMEEMAHKG------CPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           +Y  ++  FC  K  ++A      M+ +G  P++V++N ++  LC+NG++D A  LL  +
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL 182

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
              G  P   +YNT++DG    G+   A EL   M S G +  + +Y+ + +G C+  +I
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKI 242

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           E A+  + ++   GI+P VV++N + +GL +  +   A  LF  M  NG   +  TY   
Sbjct: 243 EEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTIL 302

Query: 316 IDGLCKNGYIVEAVELFHTL 335
           ++GL   G + EA +L   L
Sbjct: 303 VEGLAYEGLVKEARDLLGQL 322



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 167/326 (51%), Gaps = 6/326 (1%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
           L  ++R  GC PD+ TY  ++NG+C+      A+   E + +  G      EPNTV+Y  
Sbjct: 3   LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGG------EPNTVSYNI 56

Query: 105 IIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG 164
           ++ GL      + A++L+ +M  K   PNVVT+  +I   C       A  +  ++   G
Sbjct: 57  VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYG 116

Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
             PN +++N ++   CK  KMD+A   ++LM+  G  PD  +YNTLL   C  G V+ A 
Sbjct: 117 CTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 176

Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           +L   ++  GC   + SY+ +I+G  K  + + AL L  EM+SKG++PD++ + T+  GL
Sbjct: 177 DLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGL 236

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
               ++E A + F ++Q  G+      Y   + GLCK      A++LF  +    C  + 
Sbjct: 237 CREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNE 296

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSL 370
             Y  L++GL   G ++ A +L   L
Sbjct: 297 STYTILVEGLAYEGLVKEARDLLGQL 322



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 168/306 (54%)

Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           +L  EM D+G  P+++T+NV+++ +C+ G++D+A   L+ +  +G  P+  +YN +L G 
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
               R   A++L   M   GC   V ++++LI+  C+   +E A+ +  ++   G  P+ 
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
           + +N L     +  ++++A    + M   G   D  +Y T +  LC+NG +  A++L H 
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           L+   C   + +YN++IDGL K+G+ + ALEL   +    L P+++TY+ +  GLC + +
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
           +++A   F  +++  + P V+ ++ ++ G  +  E    I+L   M     MP+ S  +I
Sbjct: 242 IEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTI 301

Query: 455 VVDLLA 460
           +V+ LA
Sbjct: 302 LVEGLA 307



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 159/305 (52%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +LL +M+DK   P+++TY  V+ G C     ++A      +   G +PN V++N+++  L
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
               + ++A +L++ M   G  P+  T+N L+   C  G V  A E+   +   GC    
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
            SY+ L++ +CK K+++ A++    M+S+G  PD+V +NTL   L    +V+ A  L  +
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           ++  G +    +Y T IDGL K G   EA+EL   +     + DI  Y ++  GLC+  +
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +E A+  F  +    + P VV Y+ ++ GLC   +   A DLF  M  N  +PN  T+ +
Sbjct: 242 IEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTI 301

Query: 420 LIRGF 424
           L+ G 
Sbjct: 302 LVEGL 306



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 154/304 (50%), Gaps = 6/304 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV      L  +      P+ V++  ++KGL    R  +A  L  ++   GC P+V T+
Sbjct: 30  GRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 89

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++ LCR      A+ + E++     ++G  C PN+++Y  ++   CK+  +DKA   
Sbjct: 90  NMLISFLCRRGLVEPAMEVLEQIP----KYG--CTPNSLSYNPLLHAFCKQKKMDKAMAF 143

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M  +   P++V+Y +++   C   + + A  L  ++  +G  P ++++N ++D L K
Sbjct: 144 VELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTK 203

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK  EA  LLD MI  G++PD  TY T+  G C   ++  A   F  ++ MG + TV  
Sbjct: 204 AGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVL 263

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ ++ G CK +E   A+ L+S M+S G  P+   +  L  GL     V+ A  L  ++ 
Sbjct: 264 YNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLC 323

Query: 302 RNGV 305
             GV
Sbjct: 324 SRGV 327



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 126/239 (52%), Gaps = 6/239 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     VL +I K   TP+++++  L+   C + ++ +A A    +   GC PD+ +Y
Sbjct: 100 GLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSY 159

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+  LCR     VA++L  ++  G G     C P  ++Y T+IDGL K G   +A EL
Sbjct: 160 NTLLTALCRNGEVDVAIDLLHQL-KGKG-----CSPVLISYNTVIDGLTKAGKTKEALEL 213

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M  K ++P+++TYT++  G C      EA R F ++ D G++P VV +N I+  LCK
Sbjct: 214 LDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCK 273

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             +   A  L   MI +G  P+  TY  L++G    G V  A++L   + S G  +  F
Sbjct: 274 RRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVVNKKF 332



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 96/203 (47%)

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
           + L  EM  KG  PD++ +N +  G+ +  +V+ A +  + +   G   +T +Y   + G
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
           L       +A +L   +    C  ++  +N LI  LC+ G +E A+E+   +P     PN
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            ++Y+ ++   C   +MDKA      M      P++++++ L+    R  E    I+LLH
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180

Query: 439 KMKEINVMPDASIVSIVVDLLAK 461
           ++K     P     + V+D L K
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTK 203


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 216/452 (47%), Gaps = 29/452 (6%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V  G+ ++ +       P+ V + +LI G C +     A  LF +L++ G  P V TY
Sbjct: 186 GKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTY 245

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV--------------------------- 94
             ++NG C+     V   L  EM+    +  +                            
Sbjct: 246 GAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIK 305

Query: 95  --CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
             C+P+  TY  +I G C  G V KA++LL Q   + + PN V+YT +I  +C   ++  
Sbjct: 306 SGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLR 365

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A  L I+M ++G +P++VT+  ++  L   G++D A  + + M++ GV PDA  YN L+ 
Sbjct: 366 ALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMS 425

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C  GR+  AK L   M         F  + L++G+ ++ + E A  L+   + KGI P
Sbjct: 426 GLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDP 485

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
            VV +N +  G  +   ++ A   F  M +   + D +TY T IDG  K   +  A+ +F
Sbjct: 486 GVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMF 545

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +    C+ ++  Y  LI+G C SG +  A + F+ +    L PNVVTY+I+IG  C  
Sbjct: 546 GLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKG 605

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
             + KA   F  M     +PN +T++ L+ G 
Sbjct: 606 VNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL 637



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 218/461 (47%), Gaps = 31/461 (6%)

Query: 28  SLIKGLCAESRIMEAAALF--TKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           SL+  + A+  +++ A  F  T +++  C PDVF+  +L+N L +     +A  +++EM 
Sbjct: 105 SLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMV 164

Query: 86  NGNGE-----------------------------FGVVCEPNTVTYTTIIDGLCKEGFVD 116
           + NGE                             +G  C PN V Y T+IDG CK+G  +
Sbjct: 165 DRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTE 224

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIM 176
           +A  L  ++K K   P V TY ++I GFC    +    +L +EM ++G+  ++  +N I+
Sbjct: 225 RANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNII 284

Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
           D   K+G   EA+  +  MI+ G  PD  TYN L+ G C  G V+ A++L       G  
Sbjct: 285 DAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLL 344

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
               SY+ LI+ YCK  E   AL L  +M  +G KPD+V +  L  GL    +V+ A  +
Sbjct: 345 PNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTV 404

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
            ++M   GV  D   Y   + GLCK G +  A  L   +       D     +L+DG  +
Sbjct: 405 RNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIR 464

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            G  E A +LF       + P VV Y+ MI G C  G M  A   F  M +    P+  T
Sbjct: 465 HGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFT 524

Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +  +I G+I++N+    + +   M +    P+    +++++
Sbjct: 525 YSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLIN 565



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 223/454 (49%), Gaps = 20/454 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V     +L + +K    P+ V++T LI   C +   + A  L  K+   G +PD+ TY
Sbjct: 326 GEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTY 385

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L++GL       VAL +  +M     E GV+  P+   Y  ++ GLCK+G +  AK L
Sbjct: 386 AALIHGLIVAGEVDVALTVRNKMV----EKGVL--PDANIYNVLMSGLCKKGRLPAAKVL 439

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +M D+N+ P+     +++ GF    D+ EAK+LF   +++G+ P VV +N ++   CK
Sbjct: 440 LAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCK 499

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G M +A      MIQ    PD FTY+T++DG+     ++ A  +F  M    CK  V +
Sbjct: 500 FGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVT 559

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF-EIHQVERAFKLFDEM 300
           Y++LING+C + +I  A   + +MLS  +KP+VV + T+ +G F +   + +A   F++M
Sbjct: 560 YTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTY-TILIGCFCKGVNLTKACSFFEQM 618

Query: 301 QRNGVAADTWTYRTFIDGLCKN-GYIVEAVELFHTLRILKCE---------FDIRA--YN 348
                  +  TY   ++GL  N  +++       T   L  E         +D RA  YN
Sbjct: 619 LMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYN 678

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           S++  LC+   ++ AL L   +     +P+ V+   ++ GLC +G+     ++       
Sbjct: 679 SILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNE 738

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
             +   + +   +  F+   + S+   +LH + +
Sbjct: 739 RELQVAVKYSEKLDAFLSQGQTSEASLILHSLAD 772



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 180/353 (50%), Gaps = 6/353 (1%)

Query: 40  MEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNT 99
           +EAA     +   GC+PD+ TY  L+ G C       A  L E+      + G++  PN 
Sbjct: 294 IEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAI----KRGLL--PNK 347

Query: 100 VTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
           V+YT +I   CK+G   +A +LL++M ++  KP++VTY ++I G   A + + A  +  +
Sbjct: 348 VSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNK 407

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+++GV P+   +NV+M  LCK G++  A  LL  M+   V PDAF   TL+DGF   G 
Sbjct: 408 MVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGD 467

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
              AK+LF      G    V  Y+ +I GYCK   ++ AL  +  M+     PD   ++T
Sbjct: 468 FEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYST 527

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           +  G  +++ +  A ++F  M +     +  TY   I+G C +G I  A + F  +  L+
Sbjct: 528 IIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLR 587

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
            + ++  Y  LI   CK   L  A   F  +     +PN VTY+ ++ GL N+
Sbjct: 588 LKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNN 640



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 167/348 (47%), Gaps = 5/348 (1%)

Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGF--CYAKDWN-EAKRLFIEMMDQGVQPNVVTFN 173
           + + LL  MK K++ P    ++ VI  F  C   D   E  R FI++      P+V + N
Sbjct: 84  EVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKI--HHCVPDVFSCN 141

Query: 174 VIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
            +++ L K+GK++ A ++ D M+      D +T   ++ G C  G+V    +L       
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGR 201

Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
           GC   +  Y+ LI+GYCK  + E A  L+ E+  KG  P V  +  +  G  +  + E  
Sbjct: 202 GCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVV 261

Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
            KL  EM   G+      Y   ID   K+G  +EA +    +    C+ D+  YN LI G
Sbjct: 262 DKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITG 321

Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
            C  G +  A +L        L+PN V+Y+ +I   C  G+  +A DL + M E    P+
Sbjct: 322 SCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPD 381

Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           ++T+  LI G I   E    + + +KM E  V+PDA+I ++++  L K
Sbjct: 382 LVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCK 429


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 212/444 (47%), Gaps = 21/444 (4%)

Query: 4   VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
            S    VL +++ S F PD VTF +LI   C E  + EA  L  +      EP+  +YT 
Sbjct: 397 ASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTP 456

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           L++G C     +VA +L  EM  G G       P+ VT   +I GL   G VD+A  +  
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMI-GRGH-----TPDVVTLGALIHGLVVSGQVDEALMVRE 510

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M ++ + P+   Y  +I G C  +  + AK L +EM++Q VQP+   +  ++D   ++ 
Sbjct: 511 KMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSD 570

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+ +A ++ + M + G   D   YN ++ G+C +G +N A     SM  +GC    F+Y+
Sbjct: 571 KLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYT 630

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+GY K  +I+ AL    +M+ +  KP++V + +L  G   I   + A  LF  MQ  
Sbjct: 631 TLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSE 690

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL--CKSG--- 358
           G+  +   Y   I  L K    ++A   F  + +  C  +    + L++GL  C+ G   
Sbjct: 691 GLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMIN 750

Query: 359 ----------RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
                     +    L++F+ L    L P +  Y+ +I  LC    + KA +L   M   
Sbjct: 751 SNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNK 810

Query: 409 AVVPNVITFDMLIRGFIRINEPSK 432
             +P+ +TF  L+ GF  + +  K
Sbjct: 811 GCLPDPVTFLSLLYGFSSVGKSGK 834



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 210/423 (49%), Gaps = 6/423 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V  G ++LG +      P  VT+ ++I  L  +S + +  +L  +++  G  P+V  Y
Sbjct: 325 GDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIY 384

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T++  LC+      AL +  +M           +P+ VT+ T+I   C+EG V++A +L
Sbjct: 385 NTVIYALCKCRSASQALAVLNQMVASR------FDPDVVTFNTLIAAFCREGDVEEALKL 438

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L +   + ++PN ++YT +I GFC   +   A  L +EM+ +G  P+VVT   ++  L  
Sbjct: 439 LREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVV 498

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G++DEA  + + M +  V PDA  YN L+ G C    ++ AK L V M     +   F 
Sbjct: 499 SGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFV 558

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+ LI+G+ ++ ++  A  ++  M  KG   D+V +N +  G  +   +  A      M+
Sbjct: 559 YTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMR 618

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G   D +TY T IDG  K G I  A+     +   +C+ +I  Y SLI G C  G  +
Sbjct: 619 KVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTD 678

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
            A  LF S+    L PNVV Y+++IG L    +  +A   F  M  N   PN  T   L+
Sbjct: 679 SAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLV 738

Query: 422 RGF 424
            G 
Sbjct: 739 NGL 741



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 213/444 (47%), Gaps = 6/444 (1%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           +++GLC E R+ E   L       GC P    Y  L++G CR       L L  EM    
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMK- 340

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
              G++  P  VTY  II  L ++  + K + LL +MK++ + PNV  Y +VI   C  +
Sbjct: 341 ---GIM--PTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCR 395

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
             ++A  +  +M+     P+VVTFN ++   C+ G ++EA +LL   I+  + P+  +Y 
Sbjct: 396 SASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYT 455

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
            L+ GFC+ G V  A +L V M   G    V +   LI+G   + +++ AL +  +M  +
Sbjct: 456 PLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAER 515

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
            + PD  I+N L  GL +   +  A  L  EM    V  D + Y T IDG  ++  + +A
Sbjct: 516 QVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDA 575

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
            ++F  +       DI AYN++I G CKSG +  A+    S+     +P+  TY+ +I G
Sbjct: 576 RKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDG 635

Query: 389 LCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               G +  A     DM +    PN++T+  LI G+  I        L   M+   + P+
Sbjct: 636 YAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPN 695

Query: 449 ASIVSIVVDLLAKNEISLNSLPSF 472
               ++++  L K + ++ +   F
Sbjct: 696 VVHYTVLIGSLFKKDKAIQAAAYF 719



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 219/459 (47%), Gaps = 8/459 (1%)

Query: 2   GRVSHGF-VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           GRV  G  ++  R  + C  P AV +  LI G C    +     L  ++ + G  P V T
Sbjct: 290 GRVEEGRRLIEARWGEGC-VPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVT 348

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  +++ L R S      +L  EM     E G+   PN   Y T+I  LCK     +A  
Sbjct: 349 YGAIIHWLGRKSDLTKIESLLWEMK----ERGL--SPNVQIYNTVIYALCKCRSASQALA 402

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           +L QM      P+VVT+ ++I  FC   D  EA +L  E + + ++PN +++  ++   C
Sbjct: 403 VLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFC 462

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G++  AS LL  MI  G  PD  T   L+ G  ++G+V+ A  +   M          
Sbjct: 463 VRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDAN 522

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            Y++LI+G CK + +  A +L  EML + ++PD  ++ TL  G     ++  A K+F+ M
Sbjct: 523 IYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFM 582

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
           +  G   D   Y   I G CK+G + EAV    ++R + C  D   Y +LIDG  K G +
Sbjct: 583 EEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDI 642

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + AL     +      PN+VTY+ +I G CN G  D A  LF  M+   + PNV+ + +L
Sbjct: 643 KAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVL 702

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           I    + ++  +       M   +  P+ + +  +V+ L
Sbjct: 703 IGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGL 741



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 169/407 (41%), Gaps = 39/407 (9%)

Query: 77  ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           A  L+ EM   + E G     +  +   ++ GLC EG V++ + L+     +   P  V 
Sbjct: 258 ARRLYGEMLARDREGGA----DDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVF 313

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT------------------------- 171
           Y  +I G+C   D      L  EM  +G+ P VVT                         
Sbjct: 314 YNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMK 373

Query: 172 ----------FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
                     +N ++  LCK     +A  +L+ M+     PD  T+NTL+  FC  G V 
Sbjct: 374 ERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVE 433

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A +L         +    SY+ LI+G+C   E+  A  L  EM+ +G  PDVV    L 
Sbjct: 434 EALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALI 493

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            GL    QV+ A  + ++M    V  D   Y   I GLCK   +  A  L   +   K +
Sbjct: 494 HGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQ 553

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            D   Y +LIDG  +S +L  A ++F  +       ++V Y+ MI G C  G M++A   
Sbjct: 554 PDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMC 613

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
              M +   +P+  T+  LI G+ +  +    +  L  M +    P+
Sbjct: 614 MSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPN 660



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 147/304 (48%), Gaps = 2/304 (0%)

Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT--LLDGFCLTGRV 220
            G  P+    N ++  L    + + A RL   M+       A  Y+T  ++ G CL GRV
Sbjct: 233 HGALPDAPHCNRLLRLLVDRRRWECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRV 292

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
              + L  +    GC      Y++LI+GYC+  ++   L L  EM  KGI P VV +  +
Sbjct: 293 EEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAI 352

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
              L     + +   L  EM+  G++ +   Y T I  LCK     +A+ + + +   + 
Sbjct: 353 IHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRF 412

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
           + D+  +N+LI   C+ G +E AL+L R      L PN ++Y+ +I G C  G++  A D
Sbjct: 413 DPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASD 472

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
           L ++M      P+V+T   LI G +   +  + + +  KM E  VMPDA+I ++++  L 
Sbjct: 473 LLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLC 532

Query: 461 KNEI 464
           K  +
Sbjct: 533 KKRM 536



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 9/203 (4%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G      V+   +      P+ V +T LI  L  + + ++AAA F  + +  C P+  T
Sbjct: 674 IGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDAT 733

Query: 61  YTTLVNGLCRTSHTIVALNLFE-EMANGNGEF-----GVVC---EPNTVTYTTIIDGLCK 111
              LVNGL    + ++  N  + + A+          G++    +P    Y  II  LC+
Sbjct: 734 MHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCR 793

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
              + KA EL  +M +K   P+ VT+ S++ GF       + +        Q     +  
Sbjct: 794 HNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSALPNEFQQDEFEIICK 853

Query: 172 FNVIMDELCKNGKMDEASRLLDL 194
           +  ++++   +   DE SR+L L
Sbjct: 854 YMTLLNQHVMSPVRDEVSRVLQL 876


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 208/466 (44%), Gaps = 46/466 (9%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS-HTIVALNL 80
           D+  F  LI          +A   F +++ F C PDVFTY  ++  + R     ++A  +
Sbjct: 126 DSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAV 185

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           + EM   N      C PN  T+  ++DGL K+G    A+++   M  + I PN VTYT +
Sbjct: 186 YNEMLKCN------CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTIL 239

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C      +A++LF EM   G  P+ V  N ++D  CK G+M EA  LL L  + G 
Sbjct: 240 ISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGF 299

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
                 Y++L+DG     R   A EL+ +M     K  +  Y+ILI G  K  +IE AL 
Sbjct: 300 VLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALK 359

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L   M SKGI PD   +N +   L     +E    L  EM       D  T+   I  +C
Sbjct: 360 LLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV---- 376
           +NG + +A E+F  +    C   +  +N+LIDGLCKSG L+ A  L   +  G       
Sbjct: 420 RNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479

Query: 377 -----------------------------------PNVVTYSIMIGGLCNDGQMDKARDL 401
                                              P++V+Y+++I G C +G +D A  L
Sbjct: 480 RLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKL 539

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
              ++   + P+ +T++ LI G  R+    +  +L +   +    P
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP 585



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 205/415 (49%), Gaps = 16/415 (3%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
            F V   +LK   +P+  TF  L+ GL  + R  +A  +F  +   G  P+  TYT L++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241

Query: 67  GLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM 125
           GLC+      A  LF EM A+GN        P++V +  ++DG CK G + +A ELL   
Sbjct: 242 GLCQRGSPEDARKLFYEMKASGN-------YPDSVAHNALLDGFCKLGRMVEAFELLRLF 294

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           +       +  Y+S+I G   A+ + +A  L+  M+ + ++P+++ + +++  L K GK+
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKI 354

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           ++A +LL  M   G+ PD + YN ++   C  G +   + L + M          +++IL
Sbjct: 355 EDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           I   C+N  +  A  ++ E+   G  P V   N L  GL +  +++ A  L  +M+  G 
Sbjct: 415 ICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME-VGR 473

Query: 306 AADTWTY------RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
            A  +        R+F D + ++G I++A +            DI +YN LI+G C+ G 
Sbjct: 474 PASLFLRLAHSGNRSF-DTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGD 532

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
           ++ AL+L   L    L P+ VTY+ +I GL   G+ ++A  LF   ++    P V
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV 587



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 223/485 (45%), Gaps = 55/485 (11%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GR+   F +L    K  F      ++SLI GL    R  +A  L+  +     +PD+  
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIIL 340

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ GL +      AL L   M +     G+   P+T  Y  +I  LC  G +++ + 
Sbjct: 341 YTILIQGLSKAGKIEDALKLLRSMPSK----GIT--PDTYCYNAVIKALCGRGLLEEGRS 394

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L+M +    P+  T+T +I   C      +A+ +F+E+   G  P+V TFN ++D LC
Sbjct: 395 LQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLC 454

Query: 181 KNGKMDEASRLLDLMIQHGVRPD------AFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           K+G++ EA RLL   ++ G RP       A + N   D    +G +  A +        G
Sbjct: 455 KSGELKEA-RLLLHKMEVG-RPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTG 512

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
               + SY++LING+C+  +I+GAL L + +  KG+ PD V +NTL  GL  + + E AF
Sbjct: 513 NSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAF 572

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTLRILKC------------- 340
           KLF    ++        YR+ +   C+   ++ A  L+   L+ + C             
Sbjct: 573 KLF--YAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCF 630

Query: 341 -------------EFDIR-------AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
                        E D R        Y   + GLC+SGR   AL +F  L    ++    
Sbjct: 631 KEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPP 690

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEEN--AVVPNVITFDMLIRGFIRINEPSKVI-ELL 437
           +   +I GLC   Q+D A D+FL   +N   ++P V  +  L+   ++  E  +++ +L 
Sbjct: 691 SCVKLIHGLCKREQLDAAIDVFLYTLDNNFKLMPRVCNY--LLSSLLQSREKMEIVSQLT 748

Query: 438 HKMKE 442
           ++M+ 
Sbjct: 749 NRMER 753



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 176/363 (48%), Gaps = 1/363 (0%)

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           ++  +ID L ++   D   + L ++K   +  +   +  +I  +       +A   F  M
Sbjct: 94  SFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRM 153

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDE-ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
            +   +P+V T+NVI+  + +       A  + + M++    P+ +T+  L+DG    GR
Sbjct: 154 KEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
            + A+++F  M   G      +Y+ILI+G C+    E A  L+ EM + G  PD V HN 
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNA 273

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  G  ++ ++  AF+L    +++G       Y + IDGL +     +A EL+  +    
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRN 333

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
            + DI  Y  LI GL K+G++E AL+L RS+P   + P+   Y+ +I  LC  G +++ R
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGR 393

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            L L+M E    P+  T  +LI    R     K  E+  ++++    P  +  + ++D L
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGL 453

Query: 460 AKN 462
            K+
Sbjct: 454 CKS 456



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 145/355 (40%), Gaps = 66/355 (18%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PDA T T LI  +C    + +A  +F ++   GC P V T+  L++GLC++     A  L
Sbjct: 406 PDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465

Query: 81  FEEMA-------------NGNGEFGVVCE--------------------PNTVTYTTIID 107
             +M              +GN  F  + +                    P+ V+Y  +I+
Sbjct: 466 LHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLIN 525

Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
           G C+EG +D A +LL  ++ K + P+ VTY ++I G        EA +LF    D    P
Sbjct: 526 GFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP 585

Query: 168 NV---------------VTFNVIMDELCKNGKMD--------------EASRLLDLMIQH 198
            V               V FN+ M  L K   +D              E  R L  +I+ 
Sbjct: 586 AVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIEL 645

Query: 199 GVRPDAFT---YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
             R D  T   Y   L G C +GR + A  +F  +       T  S   LI+G CK +++
Sbjct: 646 DTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQL 705

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ-VERAFKLFDEMQRNGVAADT 309
           + A+ ++   L    K    + N L   L +  + +E   +L + M+R G   D+
Sbjct: 706 DAAIDVFLYTLDNNFKLMPRVCNYLLSSLLQSREKMEIVSQLTNRMERAGYDVDS 760


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/345 (35%), Positives = 181/345 (52%), Gaps = 8/345 (2%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           GC PD+FTY TL+ GLC+  + + A  L  EM          CEPN +TYT +ID  CKE
Sbjct: 9   GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG------CEPNVITYTILIDRFCKE 62

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G +++A+ +L +M  K +  N V Y  +I   C  +   +A  +F +M  +G +P++ TF
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N ++  LCK  K +EA  L   M+  GV  +  TYNTL+  F   G +  A +L   M  
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            GC     +Y+ LI   C+   IE  L+L+ +M+SKG+ P+ +  N L  GL     ++ 
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A +   +M   G+  D  TY + I+GLCK G   EA+ LF  L++     D   YN+LI 
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302

Query: 353 GLCKSGRLEIA-LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
             CK G  + A L L R +  G  +PN VT+ I++     +G  +
Sbjct: 303 WHCKEGMFDDAHLLLSRGVDSG-FIPNEVTWYILVSNFIKEGDQE 346



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 181/334 (54%)

Query: 93  VVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
           V C P+  TY T+I GLCK+G++  A+EL+ +M+ K  +PNV+TYT +I  FC      E
Sbjct: 8   VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 67

Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
           A+ +  EM  +G+  N V +N ++  LCK+ K+ +A  +   M   G +PD FT+N+L+ 
Sbjct: 68  ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 127

Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
           G C   +   A  L+  M   G      +Y+ LI+ + +   ++ AL L ++ML +G   
Sbjct: 128 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 187

Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           D + +N L   L     +E+   LF++M   G+  +  +    I+GLC+ G I  A+E  
Sbjct: 188 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 247

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
             +       DI  YNSLI+GLCK+GR + AL LF  L    + P+ +TY+ +I   C +
Sbjct: 248 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 307

Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
           G  D A  L     ++  +PN +T+ +L+  FI+
Sbjct: 308 GMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 341



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 161/308 (52%), Gaps = 6/308 (1%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD  T+ +LI GLC +  ++ A  L  ++++ GCEP+V TYT L++  C+      A N+
Sbjct: 12  PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            +EM+      G     N V Y  +I  LCK+  V  A  +   M  K  KP++ T+ S+
Sbjct: 72  LDEMS------GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 125

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           I G C    + EA  L+ +M+ +GV  N +T+N ++    + G M EA +L++ M+  G 
Sbjct: 126 IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 185

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
             D  TYN L+   C  G +     LF  M S G      S +ILING C+   I+ AL 
Sbjct: 186 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 245

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
              +M+ +G+ PD+V +N+L  GL +  + + A  LFD++Q  G+  D  TY T I   C
Sbjct: 246 FLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 305

Query: 321 KNGYIVEA 328
           K G   +A
Sbjct: 306 KEGMFDDA 313



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 160/302 (52%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+  G  P++ T+N ++  LCK G +  A  L++ M   G  P+  TY  L+D FC  GR
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
           +  A+ +   M   G       Y+ LI+  CK+++++ AL+++ +M SKG KPD+   N+
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
           L  GL ++++ E A  L+ +M   GV A+T TY T I    + G + EA++L + +    
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
           C  D   YN LI  LC++G +E  L LF  +    L PN ++ +I+I GLC  G +  A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           +   DM    + P+++T++ LI G  +     + + L  K++   + PDA   + ++   
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 460 AK 461
            K
Sbjct: 305 CK 306



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 144/274 (52%), Gaps = 6/274 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     VL  +       +AV +  LI  LC + ++ +A  +F  +   GC+PD+FT+
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ GLC+ +    AL L+++M       GV+   NT+TY T+I    + G + +A +L
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDML----LEGVI--ANTITYNTLIHAFLRRGAMQEALKL 176

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M  +    + +TY  +I+  C A +  +   LF +MM +G+ PN ++ N++++ LC+
Sbjct: 177 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 236

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +  A   L  MI  G+ PD  TYN+L++G C TGR   A  LF  ++  G      +
Sbjct: 237 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 296

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
           Y+ LI+ +CK    + A  L S  +  G  P+ V
Sbjct: 297 YNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEV 330



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 141/283 (49%), Gaps = 10/283 (3%)

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M+  G  PD FTYNTL+ G C  G +  A+EL   M+  GC+  V +Y+ILI+ +CK   
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
           +E A ++  EM  KG+  + V +N L   L +  +V+ A  +F +M   G   D +T+ +
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL-----FRS 369
            I GLCK     EA+ L+  + +     +   YN+LI    + G ++ AL+L     FR 
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
            P      + +TY+ +I  LC  G ++K   LF DM    + PN I+ ++LI G  R   
Sbjct: 185 CPL-----DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGN 239

Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
               +E L  M    + PD    + +++ L K   +  +L  F
Sbjct: 240 IQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 282



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 117/233 (50%)

Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
           SM S+GC   +F+Y+ LI G CK   +  A  L +EM  KG +P+V+ +  L     +  
Sbjct: 4   SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 63

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           ++E A  + DEM   G+A +   Y   I  LCK+  + +A+ +F  +    C+ DI  +N
Sbjct: 64  RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 123

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           SLI GLCK  + E AL L++ +    ++ N +TY+ +I      G M +A  L  DM   
Sbjct: 124 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
               + IT++ LI+   R     K + L   M    + P+    +I+++ L +
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 236



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 93/180 (51%)

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           ++  MLS G  PD+  +NTL +GL +   +  A +L +EMQ  G   +  TY   ID  C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           K G + EA  +   +       +   YN LI  LCK  +++ AL +F  +      P++ 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++ +I GLC   + ++A  L+ DM    V+ N IT++ LI  F+R     + ++L++ M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 6/148 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +  G  +   ++     P+ ++   LI GLC    I  A      +   G  PD+ TY
Sbjct: 203 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 262

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+NGLC+T     ALNLF+++     +   +C P+ +TY T+I   CKEG  D A  L
Sbjct: 263 NSLINGLCKTGRAQEALNLFDKL-----QVEGIC-PDAITYNTLISWHCKEGMFDDAHLL 316

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
           L +  D    PN VT+  ++  F    D
Sbjct: 317 LSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
           E   S+ CG   P++ TY+ +I GLC  G +  AR+L  +M+     PNVIT+ +LI  F
Sbjct: 3   ESMLSVGCG---PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRF 59

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
            +     +   +L +M    +  +A   + ++  L K+E   ++L  F
Sbjct: 60  CKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 107


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 224/493 (45%), Gaps = 44/493 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR      ++ R+       D  T+  LI  LC  +R  +   L  K+R     P+ FTY
Sbjct: 24  GRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTY 83

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+NGL +      A  +F EM   N        PN VTY  +IDG C  G  ++A  L
Sbjct: 84  NTLINGLMKERKIGGATRVFNEMLMLN------LSPNRVTYNILIDGHCDCGNFEQALRL 137

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M+ K ++P+ V Y +++ G      ++ AK L   +   G+      +  ++D LCK
Sbjct: 138 LDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCK 197

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G +DE+ +LLD+M + G  PD  T++ L++GFC  G++ +AKE+   M   G       
Sbjct: 198 HGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVI 257

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE---------- 291
           Y+ LI   CK  +I  A   Y+ M   G   D  I N L   L    +V           
Sbjct: 258 YATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMS 317

Query: 292 -------------------------RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
                                    +AF +FDEM + G     +TY + + GLCK G + 
Sbjct: 318 TIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLR 377

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA +L + L  +    D   YN+++   CK G+L  A+ LF  +    ++P+  TY+I++
Sbjct: 378 EAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIIL 437

Query: 387 GGLCNDGQMDKARDLFLD--MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
            GL   G+M  A  LF +  +    + PN + +  L  G  ++ + +    +  +M+   
Sbjct: 438 AGLSRKGKMVPAL-LFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKG 496

Query: 445 VMPDASIVSIVVD 457
           + PD   ++ V+D
Sbjct: 497 INPDTIAINAVLD 509



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 195/404 (48%), Gaps = 6/404 (1%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G  P + TY T++N  C+      A +L + M +         E +  TY  +ID LCK 
Sbjct: 5   GYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKG------IEADVCTYNMLIDDLCKN 58

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
               K   LL +M+ + I PN  TY ++I G    +    A R+F EM+   + PN VT+
Sbjct: 59  NRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTY 118

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
           N+++D  C  G  ++A RLLD+M   G+RPD   Y  LL G     + + AK L   +  
Sbjct: 119 NILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRM 178

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            G      +Y+ +I+G CK+  ++ +L L   M   G  PD++  + L  G  +  +++ 
Sbjct: 179 SGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKN 238

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A ++  +M + G+A +   Y T I   CK G I EA   + T+     + D    N LI 
Sbjct: 239 AKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLIS 298

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
            LC++GR+  A +  R +    L PN +T+  +I G    G   KA  +F +M +    P
Sbjct: 299 SLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCP 358

Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           +  T+  L++G  +     +  +LL+K+  I    D +I + ++
Sbjct: 359 SHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTIL 402



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 212/443 (47%), Gaps = 7/443 (1%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D   + +++   C   ++ +A ALF ++  F   PD  TY  ++ GL R    + AL  F
Sbjct: 394 DTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFF 453

Query: 82  EE-MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           E+ +A G         PN V YT++ DGL K G  + A  +  +M+ K I P+ +   +V
Sbjct: 454 EKALARG------TLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAV 507

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + G+       + ++LFI+M    + P++ T+N+++    K   + + S+  ++M + G+
Sbjct: 508 LDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGI 567

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
            PD  T ++++ G C +G ++   ++   M          + ++LI   C+  ++  A  
Sbjct: 568 SPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFD 627

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
           L +     GI PDV  +N +F GL     +  +  L  +M   G+   +  Y + I+G+C
Sbjct: 628 LLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMC 687

Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
           + G I  A  L   +  +       A ++++ GL + G++E A+ +   +    L+P V 
Sbjct: 688 RMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVA 747

Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           T++ ++  LC   ++ +A  L   M    V  +V+ +++LI G     +      L  +M
Sbjct: 748 TFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEM 807

Query: 441 KEINVMPDASIVSIVVDLLAKNE 463
           KE  + P+ +    ++D ++ NE
Sbjct: 808 KERGLWPNTTTYCTLIDAISTNE 830



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 202/446 (45%), Gaps = 43/446 (9%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPDVFT 60
           G++S    + G +++    PD+ T+  ++ GL  + +++ A   F K    G   P+   
Sbjct: 409 GKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVM 468

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT+L +GL +   +  A  ++EEM +          P+T+    ++DG  + G ++K ++
Sbjct: 469 YTSLFDGLFKVGQSNAASYIYEEMEHKG------INPDTIAINAVLDGYSRMGKMEKVEK 522

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L ++M+  ++ P++ TY  ++ G+   KD  +  + +  M   G+ P+ +T + I+  LC
Sbjct: 523 LFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLC 582

Query: 181 KNGKMDEASRLLDLMIQH-----------------------------------GVRPDAF 205
           K+G +D   ++L  MI                                     G+ PD  
Sbjct: 583 KSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVN 642

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TYN +  G      +  +  L   M   G   T   Y  LING C+  +I+GA  L  EM
Sbjct: 643 TYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEM 702

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            + G+    V  + +  GL +  +VE A  + D M +  +     T+ T +  LCK   +
Sbjct: 703 EAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKL 762

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EA++L   + +   + D+ AYN LI GLC  G    A  L+  +    L PN  TY  +
Sbjct: 763 SEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTL 822

Query: 386 IGGLC-NDGQMDKARDLFLDMEENAV 410
           I  +  N+G++++   ++L+  E  V
Sbjct: 823 IDAISTNEGEVEERLLVYLEQFEKLV 848



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 170/358 (47%), Gaps = 35/358 (9%)

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
           M+     P +VTY +++   C    +  A  L   M  +G++ +V T+N+++D+LCKN +
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
             +   LL  M +  + P+ FTYNTL++G     ++  A  +F  M  +       +Y+I
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI+G+C     E AL L   M +KG++PD V +  L  GL ++ + + A  L + ++ +G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
           +      Y   IDGLCK+G + E+++L   +       DI  ++ LI+G CK+G+++ A 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 365 ELFRSLPCGVLVPNVVTYS-----------------------------------IMIGGL 389
           E+   +    L PN V Y+                                   ++I  L
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300

Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
           C  G++ +A D    M    + PN ITFD +I G+  + +  K   +  +M ++   P
Sbjct: 301 CRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCP 358



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 212/461 (45%), Gaps = 7/461 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GRV+     +  +      P+++TF  +I G       ++A ++F ++   G  P  FTY
Sbjct: 304 GRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTY 363

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +L+ GLC+  +   A  L  ++ +      +    +T  Y TI+   CK G +  A  L
Sbjct: 364 GSLLKGLCKGGNLREAKKLLYKLHH------IPAAVDTNIYNTILSETCKRGKLSDAVAL 417

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELC 180
             +M   N+ P+  TY  ++ G         A   F + + +G + PN V +  + D L 
Sbjct: 418 FGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLF 477

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K G+ + AS + + M   G+ PD    N +LDG+   G++   ++LF+ M+S     ++ 
Sbjct: 478 KVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLA 537

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+IL++GY K K++      Y+ M   GI PD +  +++ +GL +   ++  FK+  +M
Sbjct: 538 TYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKM 597

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
                  D  T    I   C+   + +A +L +   +L    D+  YN++  GL ++  L
Sbjct: 598 IMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASAL 657

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
             +  L   +    + P    Y  +I G+C  G +  A  L  +ME   V    +    +
Sbjct: 658 RESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAM 717

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           +RG  +  +  + + +L  M +  ++P  +  + ++ +L K
Sbjct: 718 VRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCK 758



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 35/262 (13%)

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           ME  G   T+ +Y+ ++N  CK    + A  L   M SKGI+ DV  +N L   L + ++
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
             + + L  +M++  +A + +TY T I+GL K   I  A  +F+ + +L    +   YN 
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVV----------------------------- 380
           LIDG C  G  E AL L   +    L P+ V                             
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 381 ------TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
                  Y+ MI GLC  G +D++  L   M ++   P++ITF +LI GF +  +     
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 435 ELLHKMKEINVMPDASIVSIVV 456
           E++ KM +  + P+  I + ++
Sbjct: 241 EVICKMFKAGLAPNYVIYATLI 262



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 97/205 (47%)

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M   G  P +V +NT+     +  + + A  L D M+  G+ AD  TY   ID LCKN  
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
             +   L   +R      +   YN+LI+GL K  ++  A  +F  +    L PN VTY+I
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
           +I G C+ G  ++A  L   ME   + P+ + +  L+ G  ++ +      L+ +++   
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 445 VMPDASIVSIVVDLLAKNEISLNSL 469
           ++      + ++D L K+ +   SL
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESL 205


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 211/425 (49%), Gaps = 10/425 (2%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           +  D   +T L+  L    R  EA   F +     C P ++++T ++   C   +   A 
Sbjct: 40  YRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAW 99

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
                M +     G+   P+   Y  ++ G C  G V +A     +M  K  KPNV TY 
Sbjct: 100 RYLGYMRS----LGI--PPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYN 152

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
           +VI G C     + A  LF  +    V P+  T++ ++  LC+  +++ A ++ D+M++ 
Sbjct: 153 TVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEA 212

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK-EIEG 257
               DA  YN + DGFC   RV+ A E+  +M   GCK +V +Y+ +ING C+ K  IE 
Sbjct: 213 NYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEE 272

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
           A  L+ +M+     P+ V + T+ +GL +I++V+R  +LF  M + G++ D + Y + I 
Sbjct: 273 AYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIY 332

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS--GRLEIALELFRSLPCGVL 375
              K   + EA  +           D+  Y +LI G C++   R++ AL LF+++    +
Sbjct: 333 AFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRV 392

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            PNV+TY+I++ GLC  G+ D+A  +F +M +    PN +TF ++  G I   +  K   
Sbjct: 393 WPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFER 452

Query: 436 LLHKM 440
           +   M
Sbjct: 453 IFMDM 457



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 200/401 (49%), Gaps = 14/401 (3%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G   DV+ YT L++ L R   T  A+  F+       E    C P+  ++T II   C  
Sbjct: 39  GYRHDVYCYTRLLHHLVRARRTREAVRFFKR------ELCAHCRPSLYSFTIIIQCFCNV 92

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM--MDQGVQPNVV 170
               +A   L  M+   I P+V  Y  V++G+C   D     R  I+   M +  +PNV 
Sbjct: 93  RNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYC---DLGRVGRALIKFGKMGKTCKPNVA 149

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
           T+N +++ LCK GK+D A  L   +    V PD FTY+TL+ G C   R+  A +++  M
Sbjct: 150 TYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMM 209

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI-HQ 289
                     +Y+ + +G+CK + ++ AL +   M+ +G KP VV +N +  G+ +  ++
Sbjct: 210 LEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNR 269

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
           +E A++LF +M  +    +  TY T I GL K   +   +ELF  +       D  AY+S
Sbjct: 270 IEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHS 329

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN--DGQMDKARDLFLDMEE 407
           LI    K  +L+ A  + +      + P+V  Y+ +I G C     ++D+A  LF +M++
Sbjct: 330 LIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKD 389

Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             V PNVIT+++++RG  +     +  ++  +M ++   P+
Sbjct: 390 RRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPN 430



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 186/404 (46%), Gaps = 45/404 (11%)

Query: 5   SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
              +  LG +      PD   +  ++KG C   R+  A   F K+    C+P+V TY T+
Sbjct: 96  GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGK-TCKPNVATYNTV 154

Query: 65  VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
           +NGLC+      A++LF  + +       + +P+  TY+T++ GLC+   ++ A ++   
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHD------LVDPDGFTYSTLVHGLCQAERLEAAIKVYDM 208

Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK-NG 183
           M + N   +   Y ++  GFC  +  +EA  +   M+ +G +P+VVT+N I++ +C+   
Sbjct: 209 MLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKN 268

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           +++EA RL   M+     P+A TY T++ G      V    ELF  M   G     ++Y 
Sbjct: 269 RIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYH 328

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ--VERAFKLFDEMQ 301
            LI  + K ++++ A S+  +     + PDV ++ TL  G     +  V+ A  LF  M+
Sbjct: 329 SLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMK 388

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              V  +  TY   + GLCK G   EA ++F  +  +KC                     
Sbjct: 389 DRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCS-------------------- 428

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
                          PN +T+ +M  G+ + G+ DK   +F+DM
Sbjct: 429 ---------------PNRMTFKVMTMGMIHCGKTDKFERIFMDM 457



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 160/333 (48%), Gaps = 2/333 (0%)

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           K +  + +V  YT ++     A+   EA R F   +    +P++ +F +I+   C     
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
             A R L  M   G+ PD   YN +L G+C  GRV  A   F  M    CK  V +Y+ +
Sbjct: 96  GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTV 154

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
           ING CK  +I+ A+ L++ +    + PD   ++TL  GL +  ++E A K++D M     
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK-SGRLEIAL 364
             D   Y    DG CK   + EA+E+  T+    C+  +  YN +I+G+C+   R+E A 
Sbjct: 215 DGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAY 274

Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
            LF+ +      PN VTY  MI GL    ++ +  +LF  M +  + P+   +  LI  F
Sbjct: 275 RLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAF 334

Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
           +++ +  +   +L      +V PD  + + ++ 
Sbjct: 335 VKVRKLDEAKSILQDAARNHVGPDVYMYTTLIS 367



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 164/344 (47%), Gaps = 49/344 (14%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +GRV    +  G++ K+C  P+  T+ ++I GLC   +I  A  LFT+L     +PD FT
Sbjct: 127 LGRVGRALIKFGKMGKTC-KPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFT 185

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM--ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
           Y+TLV+GLC+      A+ +++ M  AN +G+ G         Y  + DG CKE  VD+A
Sbjct: 186 YSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAG--------AYNAMADGFCKERRVDEA 237

Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFC-YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
            E+L  M  +  KP+VVTY  +I G C Y     EA RLF +M+     PN VT+  ++ 
Sbjct: 238 LEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMIL 297

Query: 178 ELCK---------------------NG--------------KMDEASRLLDLMIQHGVRP 202
            L K                     +G              K+DEA  +L    ++ V P
Sbjct: 298 GLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGP 357

Query: 203 DAFTYNTLLDGFCLT--GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           D + Y TL+ G+C     RV+ A  LF +M+       V +Y+I++ G CK    + A  
Sbjct: 358 DVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQ 417

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           ++ EM      P+ +    + +G+    + ++  ++F +M   G
Sbjct: 418 IFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVYKG 461



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 1/197 (0%)

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
            +G + DV  +  L   L    +   A + F            +++   I   C      
Sbjct: 37  QEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPG 96

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
            A      +R L    D+ AYN ++ G C  GR+  AL  F  +      PNV TY+ +I
Sbjct: 97  RAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMG-KTCKPNVATYNTVI 155

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            GLC  G++D A  LF  +  + V P+  T+  L+ G  +       I++   M E N  
Sbjct: 156 NGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYD 215

Query: 447 PDASIVSIVVDLLAKNE 463
            DA   + + D   K  
Sbjct: 216 GDAGAYNAMADGFCKER 232



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 8/175 (4%)

Query: 293 AFKLFD-EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
           A K FD   ++ G   D + Y   +  L +     EAV  F       C   + ++  +I
Sbjct: 27  ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86

Query: 352 DGLCK---SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
              C     GR    L   RSL    + P+V  Y++++ G C+ G++ +A   F  M + 
Sbjct: 87  QCFCNVRNPGRAWRYLGYMRSLG---IPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT 143

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
              PNV T++ +I G  +  +    + L  ++    V PD    S +V  L + E
Sbjct: 144 CK-PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAE 197


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 223/467 (47%), Gaps = 41/467 (8%)

Query: 26  FTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           F  +I   C +  +  A +L   +  F CEPDV+ Y  L+N       T  AL     M 
Sbjct: 281 FNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMI 340

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
             NG     C+P+ +T++TII   C EG V +A+++   +++  + PNV  Y +++ G+ 
Sbjct: 341 K-NG-----CKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYF 394

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVI------------------------------ 175
            A+D  +A  L+ EM D+G+ P+  TFN++                              
Sbjct: 395 KARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCS 454

Query: 176 -----MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
                +  LC  G++DEA + L+ M++ G+ P    +N+++  +   G  ++A + +  M
Sbjct: 455 LYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIM 514

Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
              G   +  + S ++ G  K   ++ A  L  +M+ KG+  + V    L  G F++   
Sbjct: 515 LMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDT 574

Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
             A  L+ EM+  G+  D   +  FIDGL K G + EA E F  +       +   YNSL
Sbjct: 575 AGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSL 634

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           I GLC  G+L  AL+L R +    L+P++ T +I+I G C +G+M  A D F +M    V
Sbjct: 635 IHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGV 694

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            P+ +T++ LI G+ ++ +     E L+KM      PD +  +I + 
Sbjct: 695 TPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQ 741



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 220/468 (47%), Gaps = 41/468 (8%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C  PD   +  LI       R  +A      +   GC+P + T++T++   C   + +
Sbjct: 306 KFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVV 365

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  +FE    G  E G+   PN   Y T++ G  K   V +A  L  +M+DK I P+  
Sbjct: 366 EARKIFE----GIQEVGL--SPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGA 419

Query: 136 T-----------------------------------YTSVIRGFCYAKDWNEAKRLFIEM 160
           T                                   Y   + G C+A   +EA +   +M
Sbjct: 420 TFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDM 479

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
           +++G+ P+VV FN ++    + G  D A +   +M+  G+ P + T +++L G    GR+
Sbjct: 480 LEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRL 539

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A++L   M   G      ++++L++GY K  +  GA SL+ EM ++GI PD +  +  
Sbjct: 540 QEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAF 599

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
             GL +   VE A++ F EM + G   + + Y + I GLC  G + EA++L   +R    
Sbjct: 600 IDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGL 659

Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
             DI   N +I+G CK GR++ A + F  +    + P+ VTY+ +IGG C    M  A +
Sbjct: 660 LPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADE 719

Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
               M  +   P++ T+++ I+GF    + S+ + +L ++  + V+P+
Sbjct: 720 FLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPN 767



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 223/506 (44%), Gaps = 65/506 (12%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR S     L  ++K+   P  +TF+++I   C E  ++EA  +F  ++  G  P+V  Y
Sbjct: 327 GRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMY 386

Query: 62  TTLVNGLCRTSHTIVALNLFEEMAN---------------GNGEFGVVCE---------- 96
            TL++G  +      A  L+EEM +               GN ++G   +          
Sbjct: 387 NTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSL 446

Query: 97  ----PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK---- 148
               P+   Y   + GLC  G +D+A + L  M +K + P+VV + SVI  +  A     
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDN 506

Query: 149 -------------------------------DWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
                                             EA+ L  +M+D+G+  N V F V++D
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566

Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
              K G    A  L   M   G+ PDA  ++  +DG    G V  A E F  M   G   
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVP 626

Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
             F Y+ LI+G C   ++  AL L  EM  KG+ PD+   N +  G  +  +++ AF  F
Sbjct: 627 NNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAF 686

Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
            EM   GV  DT TY T I G CK   +V A E  + +     + DI  YN  I G C S
Sbjct: 687 AEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSS 746

Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
            ++  A+ +   L    +VPN VTY+ M+  +C D  +D+A  L   + + A VPNV+T 
Sbjct: 747 QKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTT 805

Query: 418 DMLIRGFIRINEPSKVIELLHKMKEI 443
           ++L+  F +   P K +    K+ ++
Sbjct: 806 NVLLSHFCKQGMPEKALIWGQKLNKL 831



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 197/419 (47%), Gaps = 6/419 (1%)

Query: 55  EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
           E D     TL+ G   +     +L +   M     E GV   P++   + +   L + G 
Sbjct: 205 ESDFSILNTLMRGFMNSEMAYESLEILSRMR----EVGV--RPSSSAISILFRLLLRVGD 258

Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
                +LL  M     +P    +  +I  FC       A+ L   M     +P+V  +N+
Sbjct: 259 YGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNI 318

Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
           +++     G+  +A   L LMI++G +P   T++T++  FC  G V  A+++F  ++ +G
Sbjct: 319 LINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVG 378

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
               V  Y+ L++GY K +++  A  LY EM  KGI PD    N L  G ++  +   ++
Sbjct: 379 LSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSY 438

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
           +LF +   + +  D   Y   + GLC  G + EA++    +        + A+NS+I   
Sbjct: 439 ELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAY 498

Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
            ++G  + A + ++ +    LVP+  T S M+ GL   G++ +ARDL   M +  +  N 
Sbjct: 499 SRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNK 558

Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
           + F +L+ G+ ++ + +    L ++M+   + PDA   S  +D L+K  +   +  +F+
Sbjct: 559 VAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFS 617



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 39/274 (14%)

Query: 186 DEASRLLDLMI--QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
             ++ L++ M    H    D    NTL+ GF                             
Sbjct: 188 SRSAHLVEFMWANHHKYESDFSILNTLMRGF----------------------------- 218

Query: 244 ILINGYCKNKEIE-GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
                   N E+   +L + S M   G++P     + LF  L  +      +KL   M R
Sbjct: 219 -------MNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIR 271

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
           +G       +   I   C+ GY+  A  L   +    CE D+ AYN LI+     GR   
Sbjct: 272 DGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSD 331

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           AL     +      P+++T+S +I   CN+G + +AR +F  ++E  + PNV  ++ L+ 
Sbjct: 332 ALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMS 391

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
           G+ +  +  +   L  +M++  + PD +  +I+V
Sbjct: 392 GYFKARDVCQANMLYEEMRDKGIAPDGATFNILV 425


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 228/452 (50%), Gaps = 23/452 (5%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCE---PDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
           LI GLC +SR+ +A    T LR  G E   P V ++  L++G C+     VA + F  M 
Sbjct: 241 LIDGLCRQSRLQDAV---TFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMI 297

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
               ++G++  P+  +Y  ++ GLC  G +++A E    M++  ++P++VTY  +  GF 
Sbjct: 298 ----KYGLL--PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFR 351

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                + A ++   M+  G+ P++VT+ +++   C+ G ++E+ +L + M+  G++    
Sbjct: 352 ILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
           TY  LL   C +GR++ A  L   ME +G K  + +YS           +E A+ LY EM
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEM 463

Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
            SK I P+  + + +  GLFE   +  A   FD + ++ VA +   Y   IDG  K G I
Sbjct: 464 CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNI 523

Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
            EAV  +  +        I  +NSLI G CK G+L  A++L  ++    LVP  VTY+ +
Sbjct: 524 GEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTL 583

Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
           + G C +G M    D+  +ME  A+ P  IT+ ++++G  +     + ++LL  M    +
Sbjct: 584 MNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL 643

Query: 446 MPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
            PD    + V+    K     +   +F +H Q
Sbjct: 644 FPDQITYNTVIQSFCKAH---DLQKAFQLHNQ 672



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 223/447 (49%), Gaps = 14/447 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG +   F +  ++L        VT+T L+  LC   RI EA  L  ++ V G +PD+ T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y+    G         A+ L+EEM +          PN+   + II GL ++G + +A+ 
Sbjct: 448 YS---RGAVEE-----AIELYEEMCSKR------IYPNSFVCSAIISGLFEKGAISEAQM 493

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
               +   ++   ++ Y  +I G+    +  EA R + +++++G+ P +VTFN ++   C
Sbjct: 494 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 553

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK+ EA +LLD +  HG+ P + TY TL++G+C  G ++   ++   ME+   K T  
Sbjct: 554 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 613

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y++++ G CK   +  ++ L   M ++G+ PD + +NT+     + H +++AF+L ++M
Sbjct: 614 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 673

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            ++ +     TY   I+GLC  G + +A  L  TL+         AY ++I   C  G +
Sbjct: 674 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 733

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + AL  F  +       ++  YS +I  LC    +  A+  F  M  + + P+     ++
Sbjct: 734 QNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVM 793

Query: 421 IRGFIRINEPSKVIELLHKMKEINVMP 447
           +  F R  +P+ V E+   M +  ++P
Sbjct: 794 LNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 225/439 (51%), Gaps = 14/439 (3%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P  V+F +L+ G C    +  A + F  +  +G  PDV++Y  L++GLC       AL
Sbjct: 266 FGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEAL 325

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
               +M N     GV  EP+ VTY  + +G    G +  A +++ +M    + P++VTYT
Sbjct: 326 EFTNDMEN----HGV--EPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYT 379

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            +I G C   +  E+ +L  +M+ QG++ ++VT+ V++  LCK+G++DEA  LL  M   
Sbjct: 380 ILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVI 439

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G++PD  TY+         G V  A EL+  M S       F  S +I+G  +   I  A
Sbjct: 440 GLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA 491

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
              +  +    +  +++++N +  G  ++  +  A + + ++   G++    T+ + I G
Sbjct: 492 QMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYG 551

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
            CK G + EAV+L  T+++         Y +L++G C+ G +    ++   +    + P 
Sbjct: 552 FCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPT 611

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            +TY++++ GLC +G++ ++  L   M    + P+ IT++ +I+ F + ++  K  +L +
Sbjct: 612 QITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHN 671

Query: 439 KMKEINVMPDASIVSIVVD 457
           +M + ++ P     +++++
Sbjct: 672 QMLQHSLQPSPVTYNVLIN 690



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 209/425 (49%), Gaps = 16/425 (3%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           MG V         ++K    PD  ++  L+ GLC    + EA      +   G EPD+ T
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVT 342

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           Y  L NG         A  + + M  NG         P+ VTYT +I G C+ G ++++ 
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNG-------LNPDLVTYTILICGHCQMGNIEESF 395

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L  +M  + +K ++VTYT ++   C +   +EA  L  EM   G++P+++T++      
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS------ 449

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
              G ++EA  L + M    + P++F  + ++ G    G ++ A+  F S+        +
Sbjct: 450 --RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 507

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
             Y+I+I+GY K   I  A+  Y +++ KGI P +V  N+L  G  +  ++  A KL D 
Sbjct: 508 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 567

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           ++ +G+   + TY T ++G C+ G +    ++ H +     +     Y  ++ GLCK GR
Sbjct: 568 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGR 627

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           L  +++L + +    L P+ +TY+ +I   C    + KA  L   M ++++ P+ +T+++
Sbjct: 628 LHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNV 687

Query: 420 LIRGF 424
           LI G 
Sbjct: 688 LINGL 692



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 182/411 (44%), Gaps = 59/411 (14%)

Query: 98  NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS------------------ 139
           N V +  +     +   V  A  +L +MK  N++ ++ TY S                  
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEI 226

Query: 140 --------------VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
                         +I G C      +A     E   +   P+VV+FN +M   CK G +
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 186 DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSIL 245
           D A     +MI++G+ PD ++YN LL G C+ G +  A E    ME+ G +  + +Y+IL
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 246 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGV 305
            NG+     I GA  +   ML  G+ PD+V +  L  G  ++  +E +FKL ++M   G+
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY------------------ 347
                TY   +  LCK+G I EAV L H + ++  + D+  Y                  
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSK 466

Query: 348 ---------NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
                    +++I GL + G +  A   F S+    +   ++ Y+IMI G    G + +A
Sbjct: 467 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 526

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
              +  + E  + P ++TF+ LI GF +  + ++ ++LL  +K   ++P +
Sbjct: 527 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 577


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 217/457 (47%), Gaps = 31/457 (6%)

Query: 2   GRVSHG-FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G+V  G  ++  R  K C  P+ V + +LI G C    I  A  LF +L+V G  P V T
Sbjct: 216 GKVEEGRHLIEKRWGKGC-VPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKT 274

Query: 61  YTTLVNGLCRTSH---------------TIVALNLFEEMANGNGEFGVV----------- 94
           Y  ++N  C+                    V+L +F  + +   + G             
Sbjct: 275 YGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMI 334

Query: 95  ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
              CEP+  TY T+I+G C +G V +A+ELL     + + PN  +YT +I  F    ++ 
Sbjct: 335 ESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYV 394

Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
            A  L IEM ++G   +++ +  ++  L   G++D A  + D M++ G+ PDA  YN L+
Sbjct: 395 RASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLM 454

Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
            G C  GR   AK+L V M         F  + L++G+ ++  ++ A  L+   + +GI 
Sbjct: 455 SGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGID 514

Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
             VV  N +  G  +   +  A   F  M     + D +TY T IDG  K   +  A+ +
Sbjct: 515 TSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRM 574

Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
           F  +    C+ ++  + SLI+G C++G L  A ++F  +      PNVVTY+I+IG  C 
Sbjct: 575 FGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCK 634

Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
           +G++ KA   F  M  N  +PN  TF+ L+ G    N
Sbjct: 635 EGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNN 671



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 225/506 (44%), Gaps = 65/506 (12%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           P     + +I        + EA  L+ T + V  C PDVF   +L+N L       +A  
Sbjct: 129 PTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARK 188

Query: 80  LFEEMANGNGE-----------------------------FGVVCEPNTVTYTTIIDGLC 110
           +++EM + NG+                             +G  C PN V Y T+IDG C
Sbjct: 189 VYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYC 248

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
           K G +++A  L  ++K K   P V TY ++I  FC    +    +L +EM ++G+  ++ 
Sbjct: 249 KNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQ 308

Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
            FN I+D   K+G   EA+  +  MI+ G  PD  TYNTL++G C  G+V  A+EL    
Sbjct: 309 IFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHA 368

Query: 231 ESMGCKHTVFSYSILINGYCKN-----------------------------------KEI 255
              G     FSY+ LI+ + KN                                    E+
Sbjct: 369 IRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEV 428

Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
           + AL++  +M+ +GI PD  I+N L  GL +  +   A +L  EM    V  D +   T 
Sbjct: 429 DVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATL 488

Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
           +DG  ++G + EA +LF        +  +   N++I G CK G +  AL  F+ +  GV 
Sbjct: 489 VDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVH 548

Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
            P+  TYS +I G      +  A  +F  M +    PNV+TF  LI GF R  + ++  +
Sbjct: 549 SPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEK 608

Query: 436 LLHKMKEINVMPDASIVSIVVDLLAK 461
           +  +M+     P+    +I++    K
Sbjct: 609 VFEEMRSFGFEPNVVTYTILIGYFCK 634



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 205/406 (50%), Gaps = 19/406 (4%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+V     +L   ++    P+  ++T LI         + A+ L  ++   G   D+  Y
Sbjct: 356 GKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAY 415

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             LV+GL       VAL + ++M     E G++  P+   Y  ++ GLCK+G    AK+L
Sbjct: 416 GALVHGLVVAGEVDVALTVRDKMM----ERGIL--PDANIYNVLMSGLCKKGRFPAAKQL 469

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L++M D+N+ P+     +++ GF    + +EAK+LF   +++G+  +VV  N ++   CK
Sbjct: 470 LVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCK 529

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G M++A      M      PD FTY+T++DG+     +  A  +F  M    CK  V +
Sbjct: 530 YGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVT 589

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF-EIHQVERAFKLFDEM 300
           ++ LING+C+N ++  A  ++ EM S G +P+VV + T+ +G F +  ++ +A   F++M
Sbjct: 590 FTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTY-TILIGYFCKEGKLTKACFFFEQM 648

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA-----------VELFHTLRILKCEFDIRAYNS 349
             N    +  T+   ++GL  N  I  +           +E F  +     ++ I AYNS
Sbjct: 649 LINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNS 708

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
           ++  LC+   ++ AL+L   +      P+ V++  ++ GLC +G++
Sbjct: 709 ILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRL 754



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 101/238 (42%), Gaps = 29/238 (12%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           + G +LK    P+ VTFTSLI G C    +  A  +F ++R FG EP+V TYT L+   C
Sbjct: 574 MFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFC 633

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
           +      A   FE+M          C PN  T+  +++GL     +       +  K  N
Sbjct: 634 KEGKLTKACFFFEQMLINK------CIPNDATFNYLVNGLTNNNGI------AISSKRSN 681

Query: 130 IKPN-----------------VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
            +PN                 +  Y S++   C  K    A +L  +MM +G  P+ V+F
Sbjct: 682 SQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSF 741

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
             ++  LC  G++ + + ++           A  Y+  LD F   G  + A  L  ++
Sbjct: 742 IALLHGLCLEGRLQDWNNVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTL 799


>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 603

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 205/392 (52%), Gaps = 22/392 (5%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
           +P+ + + ++++ LC   ++ +   +  +     C PDV TYT L++  C+ S    A+ 
Sbjct: 222 SPNGINYDTILRSLCDRCKLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMK 281

Query: 80  LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
           L  EM +        C+PN VTY  +I G+C EG +D+    L  +     +P+V++YT 
Sbjct: 282 LLIEMVSKE------CKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTI 335

Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
           V+        W +A +L   M+ +G   NVVTFN +++ LC+ G + +A  +L+++ +H 
Sbjct: 336 VLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHV 395

Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
             P++ +YN  + GFC     N        M S GC   + +Y+IL+   CK+++++ A+
Sbjct: 396 CTPNSISYNPSIGGFC-----NEKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAV 450

Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
            +  ++  KG+KPDV+ ++ +  GL ++ + + A +L +E    G+  +  T+ + + G+
Sbjct: 451 EILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGI 510

Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
            + G + EA+++FH L  L    +  AYN +I GLCK+ +     +           P  
Sbjct: 511 SRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGLCKTQQTSRGCK-----------PTE 559

Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            TY+I++ G+ ++G   +A  L+ ++     V
Sbjct: 560 ATYNILVKGITSEGXPKEASKLWSELYSKGPV 591



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 202/417 (48%), Gaps = 23/417 (5%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV-----CEPNTVTYTTIIDGLC 110
           P V   T L++  C+   T  A  +   +        +      C P       +I G C
Sbjct: 147 PCVIACTALISEFCKIGRTKNATRIMGILEESGAVIDITIYNFFCLPKK--NNVLIGGYC 204

Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ---- 166
             G V++A  +L  M   ++ PN + Y +++R  C   D  + K+  +E++D+ +Q    
Sbjct: 205 XSGEVEEALRVLDCM---SVSPNGINYDTILRSLC---DRCKLKQ-GMEVLDRQLQIKCY 257

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P+VVT+  ++D  CK+ ++ +A +LL  M+    +P+  TYN L+ G C  GR++     
Sbjct: 258 PDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRF 317

Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
             ++ S G +  V SY+I+++          A+ L + ML KG   +VV  NTL   L +
Sbjct: 318 LKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQ 377

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
              + +AF + + + ++    ++ +Y   I G C      E       +    C  DI  
Sbjct: 378 KGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCN-----EKSXYLEIMVSRGCYPDIVT 432

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
           YN L+  LCK  +++ A+E+ + L    L P+V+TYSI+I GL   G+ D A +L  +  
Sbjct: 433 YNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLALELLEEAC 492

Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
              + PN+ITF  ++ G  R  +  + I++ H ++ + + P+A   ++++  L K +
Sbjct: 493 TKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGLCKTQ 549



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 150/304 (49%), Gaps = 24/304 (7%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+      L  +    + PD +++T ++  L +  R  +A  L   +   GC  +V T+
Sbjct: 309 GRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTF 368

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL+N LC+      A N+ E +         VC PN+++Y   I G C E      K  
Sbjct: 369 NTLINFLCQKGLLGKAFNVLEMIXKH------VCTPNSISYNPSIGGFCNE------KSX 416

Query: 122 LLQ-MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            L+ M  +   P++VTY  ++   C  +  ++A  +  ++  +G++P+V+T+++I+D L 
Sbjct: 417 YLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLL 476

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           K GK D A  LL+     G++P+  T+ +++ G    G+V+ A ++F  +E +G +   F
Sbjct: 477 KVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAF 536

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+++I G CK ++            S+G KP    +N L  G+      + A KL+ E+
Sbjct: 537 AYNLIIMGLCKTQQT-----------SRGCKPTEATYNILVKGITSEGXPKEASKLWSEL 585

Query: 301 QRNG 304
              G
Sbjct: 586 YSKG 589



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 156/356 (43%), Gaps = 49/356 (13%)

Query: 149 DWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
           + +EA R    M ++G + P V+    ++ E CK G+   A+R++ ++ + G   D   Y
Sbjct: 128 ELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESGAVIDITIY 187

Query: 208 ---------NTLLDGFCLTGRVNHAKELFVSME--------------------------- 231
                    N L+ G+C +G V  A  +   M                            
Sbjct: 188 NFFCLPKKNNVLIGGYCXSGEVEEALRVLDCMSVSPNGINYDTILRSLCDRCKLKQGMEV 247

Query: 232 -----SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
                 + C   V +Y+ LI+  CK+  +  A+ L  EM+SK  KP+VV +N L  G+  
Sbjct: 248 LDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICN 307

Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
             +++   +    +   G   D  +Y   +  L   G   +A++L  ++    C  ++  
Sbjct: 308 EGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVT 367

Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD-M 405
           +N+LI+ LC+ G L  A  +   +   V  PN ++Y+  IGG CN+      +  +L+ M
Sbjct: 368 FNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCNE------KSXYLEIM 421

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
                 P+++T+++L+    +  +    +E+L ++    + PD    SI++D L K
Sbjct: 422 VSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLK 477



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 129/253 (50%), Gaps = 13/253 (5%)

Query: 179 LCKNGKMDEASRLLDLMIQHG-VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC-- 235
           L KNG++DEASR L+ M   G + P       L+  FC  GR  +A  +   +E  G   
Sbjct: 123 LIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESGAVI 182

Query: 236 KHTVFSY-------SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
             T++++       ++LI GYC + E+E AL +   M    + P+ + ++T+   L +  
Sbjct: 183 DITIYNFFCLPKKNNVLIGGYCXSGEVEEALRVLDCM---SVSPNGINYDTILRSLCDRC 239

Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
           ++++  ++ D   +     D  TY   ID  CK+  + +A++L   +   +C+ ++  YN
Sbjct: 240 KLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYN 299

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
           +LI G+C  GRL+  +   ++LP     P+V++Y+I++  L + G+   A  L   M   
Sbjct: 300 ALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCK 359

Query: 409 AVVPNVITFDMLI 421
               NV+TF+ LI
Sbjct: 360 GCSLNVVTFNTLI 372


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 214/423 (50%), Gaps = 6/423 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+   +V+   + +   +    TF  ++  LC E ++ +A      +   G +P+V +
Sbjct: 205 LNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVS 264

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++G     +   A  + + M           EP++ TY ++I G+CKEG +++A  
Sbjct: 265 YNTIIHGYSSRGNIEGARRILDAMRVKG------IEPDSYTYGSLISGMCKEGRLEEASG 318

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M +  + PN VTY ++I G+C   D   A     EM+ +G+ P+V T+N+++  L 
Sbjct: 319 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALF 378

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+M EA  ++  M + G+ PDA TYN L++G+   G    A +L   M S G + T  
Sbjct: 379 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 438

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI    +   ++ A  L+ ++L +G+ PDV++ N +  G      VERAF L  EM
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 498

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            R  V  D  T+ T + G C+ G + EA  L   ++    + D  +YN+LI G  + G +
Sbjct: 499 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 558

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +   +      P ++TY+ +I  LC + + D A +L  +M    + P+  T+  L
Sbjct: 559 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618

Query: 421 IRG 423
           I G
Sbjct: 619 IEG 621



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 224/441 (50%), Gaps = 6/441 (1%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           ++ F  L++  C   R  EA   F  ++  G  P + T   +++   + +   +A  L+ 
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           EM      F +       T+  +++ LCKEG + KA+E +  M+    KPNVV+Y ++I 
Sbjct: 217 EM------FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIH 270

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+    +   A+R+   M  +G++P+  T+  ++  +CK G+++EAS L D M++ G+ P
Sbjct: 271 GYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 330

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           +A TYNTL+DG+C  G +  A      M   G   +V +Y++L++       +  A  + 
Sbjct: 331 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 390

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM  KGI PD + +N L  G       ++AF L +EM   G+     TY + I  L + 
Sbjct: 391 KEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 450

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
             + EA +LF  +       D+  +N+++DG C +G +E A  L + +    + P+ VT+
Sbjct: 451 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 510

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++ G C +G++++AR L  +M+   + P+ I+++ LI G+ R  +      +  +M  
Sbjct: 511 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 570

Query: 443 INVMPDASIVSIVVDLLAKNE 463
           I   P     + ++  L KN+
Sbjct: 571 IGFNPTLLTYNALIKCLCKNQ 591



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 212/448 (47%), Gaps = 6/448 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R    F     + +    P   T   ++      +R+  A  L+ ++        V+T+ 
Sbjct: 172 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 231

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VN LC+      A      M       G+  +PN V+Y TII G    G ++ A+ +L
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFME------GLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 285

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M+ K I+P+  TY S+I G C      EA  LF +M++ G+ PN VT+N ++D  C  
Sbjct: 286 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNK 345

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G ++ A    D M++ G+ P   TYN L+    + GR+  A ++   M   G      +Y
Sbjct: 346 GDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY 405

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +ILINGY +    + A  L++EMLSKGI+P  V + +L   L   ++++ A  LF+++  
Sbjct: 406 NILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD 465

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV+ D   +   +DG C NG +  A  L   +       D   +N+L+ G C+ G++E 
Sbjct: 466 QGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE 525

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  L   +    + P+ ++Y+ +I G    G +  A  +  +M      P ++T++ LI+
Sbjct: 526 ARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIK 585

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDAS 450
              +  E     ELL +M    + PD S
Sbjct: 586 CLCKNQEGDLAEELLKEMVNKGISPDDS 613



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 190/373 (50%), Gaps = 6/373 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P+ V++ ++I G  +   I  A  +   +RV G EPD +TY +L++G+C+      A 
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 317

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF++M     E G+V  PN VTY T+IDG C +G +++A     +M  K I P+V TY 
Sbjct: 318 GLFDKMV----EIGLV--PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 371

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            ++          EA  +  EM  +G+ P+ +T+N++++   + G   +A  L + M+  
Sbjct: 372 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK 431

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P   TY +L+       R+  A +LF  +   G    V  ++ +++G+C N  +E A
Sbjct: 432 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERA 491

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L  EM  K + PD V  NTL  G     +VE A  L DEM+R G+  D  +Y T I G
Sbjct: 492 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 551

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             + G I +A  +   +  +     +  YN+LI  LCK+   ++A EL + +    + P+
Sbjct: 552 YGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 611

Query: 379 VVTYSIMIGGLCN 391
             TY  +I G+ N
Sbjct: 612 DSTYLSLIEGMGN 624



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 167/336 (49%), Gaps = 29/336 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD+ T+ SLI G+C E R+ EA+ LF K+   G  P+  TY TL++G C       A + 
Sbjct: 295 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 354

Query: 81  FEEMANGN------------------GEFGVVCE-----------PNTVTYTTIIDGLCK 111
            +EM                      G  G   +           P+ +TY  +I+G  +
Sbjct: 355 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 414

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G   KA +L  +M  K I+P  VTYTS+I          EA  LF +++DQGV P+V+ 
Sbjct: 415 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 474

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           FN ++D  C NG ++ A  LL  M +  V PD  T+NTL+ G C  G+V  A+ L   M+
Sbjct: 475 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 534

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G K    SY+ LI+GY +  +I+ A  +  EMLS G  P ++ +N L   L +  + +
Sbjct: 535 RRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGD 594

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            A +L  EM   G++ D  TY + I+G+     +VE
Sbjct: 595 LAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 192/412 (46%), Gaps = 40/412 (9%)

Query: 74  TIVALN--LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
           T +A N  LF+E+        V    +++ +  ++   C+    D+A +    MK+K I 
Sbjct: 133 TRIATNRELFDELTLSRDRLSV---KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV 189

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE---- 187
           P + T   ++  F        A  L+ EM    +   V TFN++++ LCK GK+ +    
Sbjct: 190 PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREF 249

Query: 188 -------------------------------ASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
                                          A R+LD M   G+ PD++TY +L+ G C 
Sbjct: 250 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 309

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR+  A  LF  M  +G      +Y+ LI+GYC   ++E A S   EM+ KGI P V  
Sbjct: 310 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 369

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L   LF   ++  A  +  EM++ G+  D  TY   I+G  + G   +A +L + + 
Sbjct: 370 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 429

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E     Y SLI  L +  R++ A +LF  +    + P+V+ ++ M+ G C +G ++
Sbjct: 430 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVE 489

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +A  L  +M+  +V P+ +TF+ L++G  R  +  +   LL +MK   + PD
Sbjct: 490 RAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 541


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 211/417 (50%), Gaps = 22/417 (5%)

Query: 41  EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
           +A  LF ++      P+  TY  L+ G C+      A+++F +M +     G++  PN  
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS----GLL--PNAS 61

Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
           T  T++ GLC+ G +  A +L  +M+     P   ++  ++RGF  A     A   F EM
Sbjct: 62  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMA---GRAIEFFKEM 118

Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
              GV+P++ ++++++  L  +G+M EA  L   M      PD  TYN L+DG+C  G+ 
Sbjct: 119 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQT 175

Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
             A+ L   +   G +  VF+YSI+IN YCK  ++E A  ++ +M+     P+ V  NTL
Sbjct: 176 YEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 235

Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN-GYIVEAVELFHTLRILK 339
             G  +   +E A KLF EM++ G  A   TY T ID LCK  G +  AV+LF+ L    
Sbjct: 236 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 295

Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
               I  YNSLI G   S R    L L   +      P+V+TY+ +I GLC+  +++ A+
Sbjct: 296 LTPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQ 353

Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            LF  M   A  PNV TF+ LIRG     +  +   +L +M      PD +  + ++
Sbjct: 354 RLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTII 403



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 212/439 (48%), Gaps = 43/439 (9%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           +L   F P+A T+  LI+G C   ++ +A ++F+ ++  G  P+  T  TL+ GLC    
Sbjct: 16  VLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQ 75

Query: 74  TIVALNLFEEMANG-------------NGEF---------------GVVCEPNTVTYTTI 105
              AL LF EM  G              G F               GV  EP+  +Y  +
Sbjct: 76  MSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGV--EPDLESYHIL 133

Query: 106 IDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGV 165
           +  L   G + +A  L   M      P+++TY  ++ G+C      EA+ L  E++  G 
Sbjct: 134 LSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 190

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +PNV T+++I++  CK  K++EA  +   MI+    P+A T+NTL+ GFC  G +  A +
Sbjct: 191 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 250

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNK-EIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
           LF  ME +GCK T+ +Y+ LI+  CK +  +  A+ L++++   G+ P +V +N+L  G 
Sbjct: 251 LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF 310

Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
            E  +     +L   M   G   D  TY   I GLC    + +A  LF+    + C  ++
Sbjct: 311 SE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNG---MACAPNV 365

Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
             +N LI GLC   ++E A  +   +      P++ T++ +I   C  G M  AR++  D
Sbjct: 366 TTFNFLIRGLCAQKKVEEARNILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMKD 421

Query: 405 MEENAVVPNVITFDMLIRG 423
           M ++   PN  T   L  G
Sbjct: 422 MLKHGFYPNTYTTYALAHG 440



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 140/278 (50%), Gaps = 6/278 (2%)

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K D+A RL   ++     P+A TYN L+ GFC  G+++ A  +F  M+S G      + +
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            L+ G C+  ++  AL L+ EM +    P    HN L  G F      RA + F EM+ +
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFF---MAGRAIEFFKEMKAS 121

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           GV  D  +Y   +  L  +G + EA  LF  +    C  DI  YN L+DG CK G+   A
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEA 178

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
             L + +      PNV TYSI+I   C   ++++A ++F+ M E+  VPN +TF+ LI G
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 238

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           F +       I+L  +M++I         + ++D L K
Sbjct: 239 FCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 276



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 7/302 (2%)

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           A+  ++A RLF E++     PN  T+NV++   CK G+M +A  +   M   G+ P+A T
Sbjct: 3   ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
            NTLL G C  G+++ A +LF  M++     T  S++IL+ G+        A+  + EM 
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMK 119

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
           + G++PD+  ++ L   L +  ++  A  LF  M     + D  TY   +DG CK G   
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTY 176

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           EA  L   +     E ++  Y+ +I+  CK  ++E A E+F  +     VPN VT++ +I
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 236

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP-SKVIELLHKMKEINV 445
            G C  G ++ A  LF +ME+      ++T++ LI    +        ++L +K++   +
Sbjct: 237 AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGL 296

Query: 446 MP 447
            P
Sbjct: 297 TP 298



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 144/285 (50%), Gaps = 16/285 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G+      ++  ILK+ + P+  T++ +I   C   ++ EA  +F K+    C P+  T
Sbjct: 172 IGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 231

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE-GFVDKAK 119
           + TL+ G C+      A+ LF EM        + C+   VTY T+ID LCK+ G V  A 
Sbjct: 232 FNTLIAGFCKAGMLEDAIKLFAEMEK------IGCKATIVTYNTLIDSLCKKRGGVYTAV 285

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           +L  +++   + P +VTY S+I+GF  ++  N+  RL   M  +G +P+V+T+N ++  L
Sbjct: 286 DLFNKLEGAGLTPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGL 343

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           C   ++++A RL + M      P+  T+N L+ G C   +V  A+ +   M +      +
Sbjct: 344 CSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDM 396

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
            +++ +I  +CK   +  A  +  +ML  G  P+      L  G+
Sbjct: 397 TTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 131/255 (51%), Gaps = 22/255 (8%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V   + V  ++++S   P+AVTF +LI G C    + +A  LF ++   GC+  + TY 
Sbjct: 209 KVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYN 268

Query: 63  TLVNGLCRTSHTI-VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE- 120
           TL++ LC+    +  A++LF ++       G    P  VTY ++I     +GF ++A + 
Sbjct: 269 TLIDSLCKKRGGVYTAVDLFNKLE------GAGLTPTIVTYNSLI-----QGFSERANDG 317

Query: 121 --LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
             LL  M  +  KP+V+TY  +I G C A    +A+RLF  M      PNV TFN ++  
Sbjct: 318 LRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRG 374

Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
           LC   K++EA  +LD M      PD  T+NT++  FC  G ++ A+E+   M   G    
Sbjct: 375 LCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPN 430

Query: 239 VFSYSILINGYCKNK 253
            ++   L +G   +K
Sbjct: 431 TYTTYALAHGIQSSK 445


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 217/423 (51%), Gaps = 6/423 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R +  F++L R+ K   TPD  T+ +LI G   E +I  A  +F  +      P V TYT
Sbjct: 239 RSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYT 298

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           T+++G CR      AL++  EM       GV+  P+ +TY+ +++G CK   +  A +L+
Sbjct: 299 TMIDGYCRNRRIDKALSVLSEMEIT----GVM--PSELTYSALLNGYCKVSMLGPALDLM 352

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
           + +K + I  N    T +I GFC   + ++AK++   M++ G+ P+VVT++ +++ +C+ 
Sbjct: 353 VDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRM 412

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
            KM E   +L  M + G+ P+   Y TL+  +C  G V  A + FV +   G       +
Sbjct: 413 AKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIH 472

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + L+  + +   I  A      M    I  + V  N +        ++  AF ++D+M R
Sbjct: 473 NALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVR 532

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            G + +  TY+  + GLC+ G++V+A +    L  +    D + +N+L+ G+CK G L+ 
Sbjct: 533 YGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDE 592

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           AL++   +     +P++ TY+I++ G C  G++  A  +   M E  VVP+ + +  L+ 
Sbjct: 593 ALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLN 652

Query: 423 GFI 425
           G I
Sbjct: 653 GLI 655



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 225/483 (46%), Gaps = 42/483 (8%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+++H   V   +L+    P   T+T++I G C   RI +A ++ +++ + G  P   TY
Sbjct: 273 GKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTY 332

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+NG C+ S    AL+L  ++ +     G+    N    T +IDG C+ G + KAK++
Sbjct: 333 SALLNGYCKVSMLGPALDLMVDLKSR----GITI--NKTMCTILIDGFCQVGEISKAKQI 386

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M +  I P+VVTY+++I G C     +E K +   M   G+ PN V +  ++   CK
Sbjct: 387 LKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCK 446

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +  A +    + + G+  +   +N LL  F   G +  A+     M  M       S
Sbjct: 447 AGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVS 506

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ +I+ YC   +I  A S+Y +M+  G  P+V  +  L  GL +   + +A +    + 
Sbjct: 507 FNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLL 566

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
               A D  T+   + G+CK G + EA+++   +    C  DI  Y  L+ G C+ G++ 
Sbjct: 567 DIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKIL 626

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL------------------ 403
            AL + + +    +VP+ V Y+ ++ GL N+GQ+  A  +F                   
Sbjct: 627 PALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSL 686

Query: 404 ------------------DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
                             DM +N V PN  ++++L+ G+++  + SK + L   M    +
Sbjct: 687 MNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGI 746

Query: 446 MPD 448
            PD
Sbjct: 747 RPD 749



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 222/446 (49%), Gaps = 5/446 (1%)

Query: 2    GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
            G +     +  +++K+   PD  T+T L+ G C + +I+ A  +   +   G  PD   Y
Sbjct: 588  GTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAY 647

Query: 62   TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            T L+NGL        A  +F+E+    G +      + + Y ++++G  K G V+  K +
Sbjct: 648  TCLLNGLINEGQVKAASYVFQEIICKEGLYA-----DCIAYNSLMNGYLKGGNVNTIKRM 702

Query: 122  LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            +  M    + PN  +Y  ++ G+     ++++  L+  M+ +G++P+ VT+ +++  L +
Sbjct: 703  MSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 762

Query: 182  NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
             G +D A + L+ M+  G+ PD   ++ L+  F    ++++A  LF  M+ +    +  +
Sbjct: 763  CGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKT 822

Query: 242  YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            +S +ING  +   ++ +  +  EML  G++P+   +  L      + +++RAF+L +EM+
Sbjct: 823  FSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMK 882

Query: 302  RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
              G+        + I GLC+ G + EAV +F  +        +  + +L+  LCK  ++ 
Sbjct: 883  AIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIA 942

Query: 362  IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
             AL L R +    L  +VV+Y+++I GLC D  +  A DL+ +M+   + PNV T+  L 
Sbjct: 943  DALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLT 1002

Query: 422  RGFIRINEPSKVIELLHKMKEINVMP 447
                         ELL  ++E  ++P
Sbjct: 1003 GAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 219/456 (48%), Gaps = 51/456 (11%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           ++V+F  +I   C   +I+EA +++  +  +G  P+V TY  L+ GLC+  H + A    
Sbjct: 503 NSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFM 562

Query: 82  EEMANGNGEFGVVCEPNTV---TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
                    F ++  P+ V   T+  ++ G+CK G +D+A ++  +M   N  P++ TYT
Sbjct: 563 ---------FCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYT 613

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQ 197
            ++ GFC       A  +   M+++GV P+ V +  +++ L   G++  AS +  +++ +
Sbjct: 614 ILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICK 673

Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
            G+  D   YN+L++G+   G VN  K +   M          SY+IL++GY K  +   
Sbjct: 674 EGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSK 733

Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD--------- 308
           +L LY  M+ KGI+PD V +  L +GL E   ++ A K  ++M   G+  D         
Sbjct: 734 SLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILIT 793

Query: 309 --------------------------TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
                                     + T+   I+GL +  Y+ ++ E+ H +  +  + 
Sbjct: 794 SFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQP 853

Query: 343 DIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF 402
           +   Y +L++  C+ G ++ A  L   +    +VP  V  S +I GLC  G++++A  +F
Sbjct: 854 NHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVF 913

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
            +M  + +VP V TF  L+    +    SK+ + LH
Sbjct: 914 SNMMRSGMVPTVATFTTLMHSLCK---ESKIADALH 946



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 215/434 (49%), Gaps = 10/434 (2%)

Query: 21  PDAV---TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           P AV   TF +L+ G+C    + EA  +  K+    C PD+ TYT L++G CR    + A
Sbjct: 569 PSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPA 628

Query: 78  LNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK-NIKPNVVT 136
           L + + M     E GVV  P+TV YT +++GL  EG V  A  +  ++  K  +  + + 
Sbjct: 629 LVMLQMML----EKGVV--PDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIA 682

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y S++ G+    + N  KR+  +M    V PN  ++N++M    K G+  ++  L   M+
Sbjct: 683 YNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMV 742

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           + G+RPD  TY  L+ G    G ++ A +    M   G       + ILI  + +  ++ 
Sbjct: 743 RKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMH 802

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            AL L++ M    + P     + +  GL   + ++++ ++  EM + G+  +   Y   +
Sbjct: 803 NALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALV 862

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +  C+ G I  A  L   ++ +       A +S+I GLC+ G+LE A+ +F ++    +V
Sbjct: 863 NAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMV 922

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P V T++ ++  LC + ++  A  L   ME   +  +V+++++LI G  +    S  ++L
Sbjct: 923 PTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDL 982

Query: 437 LHKMKEINVMPDAS 450
             +MK   + P+ +
Sbjct: 983 YGEMKSKGLWPNVT 996



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 221/451 (49%), Gaps = 9/451 (1%)

Query: 8   FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
           F  L RI+    + + V F  LIK    E ++++AA     +   G +       +++  
Sbjct: 70  FTSLLRIISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKA 129

Query: 68  LCRTSHT-IVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           L     +  V L L E +A    +F +    +  T   +++ LC  G   KA+++L +MK
Sbjct: 130 LVEEGESKYVWLFLRESLAR---KFPL----DVTTCNILLNSLCTNGEFRKAEDMLQKMK 182

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
              +  N  TY +++  +     +  A  +  +M    +Q ++ T+N+++D+LC+  +  
Sbjct: 183 SCCL-SNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSA 241

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  LL  M +  + PD  TYNTL++GF   G++NHA+ +F  M       +V +Y+ +I
Sbjct: 242 RAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMI 301

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
           +GYC+N+ I+ ALS+ SEM   G+ P  + ++ L  G  ++  +  A  L  +++  G+ 
Sbjct: 302 DGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGIT 361

Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
            +       IDG C+ G I +A ++  ++     + D+  Y++LI+G+C+  ++    E+
Sbjct: 362 INKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEI 421

Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
              +    ++PN V Y+ +I   C  G +  A   F+D+    +V N +  + L+R F R
Sbjct: 422 LSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYR 481

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVD 457
               ++       M  +N+  ++   + ++D
Sbjct: 482 EGMITEAEHFRQYMSRMNISFNSVSFNCIID 512



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 9/230 (3%)

Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL 296
           H VF   +LI  Y K +++  A      M   G K   V  N++   L E  + +  +  
Sbjct: 85  HVVFE--LLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLF 142

Query: 297 FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCK 356
             E        D  T    ++ LC NG   +A ++   ++   C  +   YN+++    K
Sbjct: 143 LRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSC-CLSNSATYNTILHWYVK 201

Query: 357 SGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
            GR + AL +   +    +  ++ TY+IMI  LC   +  +A  L   M ++ + P+  T
Sbjct: 202 KGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECT 261

Query: 417 FDMLIRGFI---RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           ++ LI GF    +IN    V    H +++  ++P  +  + ++D   +N 
Sbjct: 262 YNTLINGFFGEGKINHARCVFN--HMLRQ-TLVPSVATYTTMIDGYCRNR 308


>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Glycine max]
          Length = 632

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 233/440 (52%), Gaps = 23/440 (5%)

Query: 27  TSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC-----RTSHTIVALNLF 81
           T ++  L    +  EA  +F  L   G +P + TYTTL+N L      +  H+IV+L   
Sbjct: 76  TKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEE 135

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           ++M           +P+++ +  +I+   + G ++ AK+++ +MK+  +KP+  TY ++I
Sbjct: 136 KQM-----------KPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLI 184

Query: 142 RGFCYAKDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           +G+  A   +E+ +L   M  +G V+PN+ T+N+++  LCK   + EA  ++  M   G+
Sbjct: 185 KGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGM 244

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PD  T+NT+   +   G+   A+ + + M+    K    + +I+I+GYC+  +++ AL 
Sbjct: 245 QPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALR 304

Query: 261 LYSEMLSKGIKPDVVIHNTL---FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
               M   G++P++++ N+L   FV + +   V+   KL +E Q   +  D  TY T ++
Sbjct: 305 FVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQ---IRPDVITYSTIMN 361

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
              + G++ +  E+++ +     + D  AY+ L  G  ++  +E A E+   +    + P
Sbjct: 362 AWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHP 421

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           NVV ++ +I G C+ G+MD A  +F  M E  V PN+ TF+ LI G+    +P K   +L
Sbjct: 422 NVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGML 481

Query: 438 HKMKEINVMPDASIVSIVVD 457
             M+E +V P  S + +V +
Sbjct: 482 QIMEEFHVQPKKSTILLVAE 501



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 197/416 (47%), Gaps = 7/416 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+     V+   +++    P   T+T+L+  L  +       ++ + +     +PD   +
Sbjct: 86  GKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFF 145

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+N    + +   A  + ++M     E G+  +P+  TY T+I G    G  D++ +L
Sbjct: 146 NALINAFAESGNMEDAKKVVQKMK----ESGL--KPSACTYNTLIKGYGIAGKPDESMKL 199

Query: 122 L-LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L   + N+KPN+ TY  +IR  C  ++ +EA  +  +M   G+QP+VVTFN I     
Sbjct: 200 LDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYA 259

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           +NGK  +A  ++  M ++ ++P+  T   ++ G+C  G+V  A      M+ +G +  + 
Sbjct: 260 QNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLI 319

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
             + L+NG+    + +G   +   M    I+PDV+ ++T+     +   +E+  ++++ M
Sbjct: 320 VLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNM 379

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            ++GV  D   Y     G  +   + +A E+   +       ++  + ++I G C  GR+
Sbjct: 380 LKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRM 439

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
           + A+ +F  +    + PN+ T+  +I G     Q  KA  +   MEE  V P   T
Sbjct: 440 DNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKST 495



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 145/304 (47%), Gaps = 15/304 (4%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P+  T+  LI+ LC    I EA  +  K+   G +PDV T+ T+     +   T  A  +
Sbjct: 211 PNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAM 270

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
             EM   +       +PN  T T II G C+EG V +A   + +MKD  ++PN++   S+
Sbjct: 271 ILEMQRNS------LKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSL 324

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
           + GF    D +    +   M +  ++P+V+T++ IM+   + G +++   + + M++ GV
Sbjct: 325 VNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGV 384

Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
           +PDA  Y+ L  G+     +  A+E+   M   G    V  ++ +I+G+C    ++ A+ 
Sbjct: 385 KPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMR 444

Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA---------ADTWT 311
           ++ +M   G+ P++    TL  G  E  Q  +A  +   M+   V          A+ W 
Sbjct: 445 VFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWR 504

Query: 312 YRTF 315
           +  F
Sbjct: 505 FAGF 508



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 6/172 (3%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD +T+++++        + +   ++  +   G +PD   Y+ L  G  R      A   
Sbjct: 351 PDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKA--- 407

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
            EEM     + GV   PN V +TT+I G C  G +D A  +  +M +  + PN+ T+ ++
Sbjct: 408 -EEMLTVMTKSGV--HPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETL 464

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
           I G+  AK   +A+ +   M +  VQP   T  ++ +     G  + A  LL
Sbjct: 465 IWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRFAGFKERAKTLL 516



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 1/180 (0%)

Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
           L +  + + A  +F  +   G      TY T ++ L    Y      +   +   + + D
Sbjct: 82  LIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPD 141

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF- 402
              +N+LI+   +SG +E A ++ + +    L P+  TY+ +I G    G+ D++  L  
Sbjct: 142 SIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLD 201

Query: 403 LDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
           L   E  V PN+ T++MLIR   ++   S+   +++KM    + PD    + +    A+N
Sbjct: 202 LMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQN 261



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 6/148 (4%)

Query: 10  VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
           +   +LKS   PDA  ++ L KG      + +A  + T +   G  P+V  +TT+++G C
Sbjct: 375 IYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWC 434

Query: 70  RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
                  A+ +F++M    GEFGV   PN  T+ T+I G  +     KA+ +L  M++ +
Sbjct: 435 SVGRMDNAMRVFDKM----GEFGV--SPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFH 488

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           ++P   T   V   + +A     AK L 
Sbjct: 489 VQPKKSTILLVAEAWRFAGFKERAKTLL 516



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 55/113 (48%)

Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
           +R+   +++ L KSG+ + A+ +F++L  G   P++ TY+ ++  L           +  
Sbjct: 72  VRSRTKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVS 131

Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
            +EE  + P+ I F+ LI  F          +++ KMKE  + P A   + ++
Sbjct: 132 LVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLI 184


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/436 (31%), Positives = 224/436 (51%), Gaps = 6/436 (1%)

Query: 14  ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
           ++ S ++ +  TF  +I  LC E +++EA ++   +      P+V ++  +++   +   
Sbjct: 205 MVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGE 264

Query: 74  TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
             +AL L     N     G    PN VTY  II+G CK   ++ AK +L +M    I  N
Sbjct: 265 MDLALKLTR---NTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSN 321

Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
             TY  +I G+      + A RL  EM++  + P+ V +N ++  L   G+++EAS LL 
Sbjct: 322 ERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLS 381

Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
            MI   + PD FTY+ L  G CL+G +N A  +   +         ++++ILIN   +++
Sbjct: 382 DMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSR 441

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
            I GA  L S M+ +GIKPD+V + TL  G  +  ++E A +++D+  +    ++   Y 
Sbjct: 442 NIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYN 501

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF-RSLPC 372
           + +DGLCK G I  A  L   L+      D   YN+L+ G C +G +E A  LF   +  
Sbjct: 502 SILDGLCKQGSIDAARLLVDKLQ-QNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMINV 560

Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
           G LV N+V+Y+IMI  LC  G + +A +L   M    +VP++IT+  LI  F++      
Sbjct: 561 GSLV-NIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDN 619

Query: 433 VIELLHKMKEINVMPD 448
           VIEL   M     +PD
Sbjct: 620 VIELHDYMVLKGAVPD 635



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 201/407 (49%), Gaps = 10/407 (2%)

Query: 45  LFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTT 104
           ++ ++   G   +V T+  ++  LC+    + A+++   M        +   PN V++  
Sbjct: 201 MYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLM------LKIEIWPNVVSFNM 254

Query: 105 IIDGLCKEGFVDKAKELLLQ---MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
           IID   K G +D A +L      +   ++ PN+VTY  +I GFC  +    AK +  EM+
Sbjct: 255 IIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMI 314

Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
             G+  N  T+  ++D   + G +D A RL D M++  + PD   YN+L+    + G + 
Sbjct: 315 KLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELE 374

Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
            A  L   M +       F+YSIL  G C +  +  AL ++  ++ + +  D   HN L 
Sbjct: 375 EASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILI 434

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
             +F+   +  A +L   M   G+  D  TY T + G CK G I  AV+++        +
Sbjct: 435 NYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGK 494

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
            ++  YNS++DGLCK G ++ A  L   L     + +V TY+ ++ G C +G+++KA  L
Sbjct: 495 SNLVVYNSILDGLCKQGSIDAARLLVDKLQQNGFLDSV-TYNTLLHGFCVNGEVEKAFAL 553

Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           FL+M     + N+++++++I    ++    + +EL+  M    ++PD
Sbjct: 554 FLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPD 600



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 162/316 (51%), Gaps = 7/316 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   F +   ++++   PD V + SLI  L  E  + EA+ L + +      PD FTY
Sbjct: 336 GSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTY 395

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L  GLC + H   AL +   +   N         +  T+  +I+ + +   +  AK+L
Sbjct: 396 SILTKGLCLSGHLNKALRVHYYIVERN------LVKDAYTHNILINYMFQSRNIAGAKQL 449

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  M  + IKP++VTY +++ G C       A +++ + +    + N+V +N I+D LCK
Sbjct: 450 LSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCK 509

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G +D A  L+D + Q+G   D+ TYNTLL GFC+ G V  A  LF+ M ++G    + S
Sbjct: 510 QGSIDAARLLVDKLQQNGFL-DSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVS 568

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+I+IN  CK   I+ A+ L   M S+GI PD++ + TL     + +  +   +L D M 
Sbjct: 569 YNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMV 628

Query: 302 RNGVAADTWTYRTFID 317
             G   D  TY++ + 
Sbjct: 629 LKGAVPDRQTYQSLVS 644



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 184/389 (47%), Gaps = 43/389 (11%)

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G  DK   + ++M       NV T+  +I   C      EA  +   M+   + PNVV+F
Sbjct: 193 GETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSF 252

Query: 173 NVIMDELCKNGKMDEA---SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           N+I+D+  K G+MD A   +R  +++    V P+  TYN +++GFC   R+  AK +   
Sbjct: 253 NMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAE 312

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M  +G      +Y+ LI+GY +   ++ A  L  EM+   + PD V++N+L   L+   +
Sbjct: 313 MIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGE 372

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG----------YIVE------------ 327
           +E A  L  +M    +  D +TY     GLC +G          YIVE            
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNI 432

Query: 328 -------------AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
                        A +L  ++ +   + D+  Y +L+ G CK G++E A++++       
Sbjct: 433 LINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKAD 492

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
              N+V Y+ ++ GLC  G +D AR L   +++N  + +V T++ L+ GF    E  K  
Sbjct: 493 GKSNLVVYNSILDGLCKQGSIDAARLLVDKLQQNGFLDSV-TYNTLLHGFCVNGEVEKAF 551

Query: 435 ELLHKMKEINVMPDASIVS--IVVDLLAK 461
            L  +M  INV    +IVS  I+++ L K
Sbjct: 552 ALFLEM--INVGSLVNIVSYNIMINFLCK 578



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 130/256 (50%), Gaps = 8/256 (3%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G ++    V   I++     DA T   LI  +     I  A  L + + V G +PD+ TY
Sbjct: 406 GHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTY 465

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TLV G C+      A+ ++++    +G+       N V Y +I+DGLCK+G +D A+ L
Sbjct: 466 GTLVAGHCKEGKIEAAVQIYDKTVKADGK------SNLVVYNSILDGLCKQGSIDAAR-L 518

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L+    +N   + VTY +++ GFC   +  +A  LF+EM++ G   N+V++N++++ LCK
Sbjct: 519 LVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCK 578

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A  L+  M   G+ PD  TY TL+  F  +   ++  EL   M   G      +
Sbjct: 579 MGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQT 638

Query: 242 YSILINGYCKNKEIEG 257
           Y  L++  C  +  EG
Sbjct: 639 YQSLVSP-CLQEHTEG 653



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 113/228 (49%), Gaps = 3/228 (1%)

Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
           C      +  L+    + K +EGA  +  ++  +G    +   N     L ++ + ++ +
Sbjct: 140 CNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFW 199

Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
            ++ EM  +G + +  T+   I  LCK   ++EA+ + + +  ++   ++ ++N +ID  
Sbjct: 200 NMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKA 259

Query: 355 CKSGRLEIALELFRS---LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
            K G +++AL+L R+   +  G + PN+VTY+ +I G C   +++ A+++  +M +  + 
Sbjct: 260 SKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGID 319

Query: 412 PNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
            N  T+  LI G+ R         L  +M E  ++PD  + + ++  L
Sbjct: 320 SNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWL 367


>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
 gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
          Length = 453

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 217/431 (50%), Gaps = 6/431 (1%)

Query: 27  TSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMAN 86
           T L+  L  + +  EA ++F  L   G +P + TYTTLV  L R       L L  ++  
Sbjct: 17  TKLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEE 76

Query: 87  GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
            NG      +P+++ + +II+   + G + +A +L  +MK+   KP   T+ ++I+G+  
Sbjct: 77  -NG-----MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGN 130

Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
           A    EA +L   + D GV+PN  T+N+++   C    M+EA  ++  M+  G++PDA T
Sbjct: 131 AGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVT 190

Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
           YNTL   +   G    A+E+ + M +        + SI++NGYCK   +  A      M 
Sbjct: 191 YNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMK 250

Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
             G+ P++ + N+L  G  +    E   ++   M+ NGV  D  T+ T ++     G + 
Sbjct: 251 ELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMD 310

Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
           +  E+F+ +   + E DI A++ L  G  ++G  E A  +  S+    + PNVV  + +I
Sbjct: 311 KCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVI 370

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
            G C+ G+M+ A  ++  M E  V PN+ T++ LI G+    +P K  ELL  M+E  V 
Sbjct: 371 SGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVF 430

Query: 447 PDASIVSIVVD 457
           P    + ++ D
Sbjct: 431 PKKGTMQLIAD 441



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 202/427 (47%), Gaps = 8/427 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +   ++     P  +T+T+L+  L  +        L +K+   G +PD   +
Sbjct: 27  GKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILF 86

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +++N    + +   A+ LF +M          C+P T T+ T+I G    G  ++A +L
Sbjct: 87  NSIINAFSESGNMKEAMKLFRKMKESG------CKPTTSTFNTLIKGYGNAGKTEEALKL 140

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L  ++D  +KPN  TY  ++R +C  ++  EA  +  +M+  G+QP+ VT+N +     +
Sbjct: 141 LEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAE 200

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+   A  ++  M+   V P+  T + +++G+C  G +  A      M+ +G    +F 
Sbjct: 201 KGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFV 260

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           ++ LI G+    + EG   + + M   G++PDVV  +T+        ++++  ++F++M 
Sbjct: 261 FNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMV 320

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           +  +  D   +     G  + G   +A  +  ++R      ++    ++I G C +G++E
Sbjct: 321 KAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKME 380

Query: 362 IALELFRSLPCGVLV-PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
            A++++  + C + V PN+ TY  +I G     Q  KA +L   MEE  V P   T  ++
Sbjct: 381 HAMKVYEKM-CEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKGTMQLI 439

Query: 421 IRGFIRI 427
              +  I
Sbjct: 440 ADAWRAI 446



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 150/327 (45%), Gaps = 6/327 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+      +L  +      P+  T+  L++  C +  + EA  +  K+   G +PD  TY
Sbjct: 132 GKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTY 191

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL         TI A  +  EM N          PN  T + I++G CKEG +  A   
Sbjct: 192 NTLARAYAEKGETIRAEEMILEMLNRR------VTPNERTCSIIVNGYCKEGNMVDASRF 245

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           + +MK+  + PN+  + S+I+GF    D      +   M + GV+P+VVTF+ IM+    
Sbjct: 246 VFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSS 305

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G+MD+   + + M++  + PD   ++ L  G+   G    A+ +  SM   G    V  
Sbjct: 306 AGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVI 365

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            + +I+G+C   ++E A+ +Y +M   G+ P++  + TL  G  E  Q  +A +L   M+
Sbjct: 366 CTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVME 425

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEA 328
             GV     T +   D     G + E+
Sbjct: 426 EKGVFPKKGTMQLIADAWRAIGLLSES 452


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 214/423 (50%), Gaps = 6/423 (1%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           + R+   +V+   + +   +    TF  ++  LC E ++ +A      +   G +P+V +
Sbjct: 227 LNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVS 286

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y T+++G     +   A  + + M           EP++ TY ++I G+CKEG +++A  
Sbjct: 287 YNTIIHGYSSRGNIEGARRILDAMRVKG------IEPDSYTYGSLISGMCKEGRLEEASG 340

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  +M +  + PN VTY ++I G+C   D   A     EM+ +G+ P+V T+N+++  L 
Sbjct: 341 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALF 400

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G+M EA  ++  M + G+ PDA TYN L++G+   G    A +L   M S G + T  
Sbjct: 401 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 460

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
           +Y+ LI    +   ++ A  L+ ++L +G+ PDV++ N +  G      VERAF L  EM
Sbjct: 461 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 520

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            R  V  D  T+ T + G C+ G + EA  L   ++    + D  +YN+LI G  + G +
Sbjct: 521 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 580

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           + A  +   +      P ++TY+ +I  LC + + D A +L  +M    + P+  T+  L
Sbjct: 581 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640

Query: 421 IRG 423
           I G
Sbjct: 641 IEG 643



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 224/441 (50%), Gaps = 6/441 (1%)

Query: 23  AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
           ++ F  L++  C   R  EA   F  ++  G  P + T   +++   + +   +A  L+ 
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 238

Query: 83  EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
           EM      F +       T+  +++ LCKEG + KA+E +  M+    KPNVV+Y ++I 
Sbjct: 239 EM------FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIH 292

Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
           G+    +   A+R+   M  +G++P+  T+  ++  +CK G+++EAS L D M++ G+ P
Sbjct: 293 GYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 352

Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLY 262
           +A TYNTL+DG+C  G +  A      M   G   +V +Y++L++       +  A  + 
Sbjct: 353 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 412

Query: 263 SEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN 322
            EM  KGI PD + +N L  G       ++AF L +EM   G+     TY + I  L + 
Sbjct: 413 KEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 472

Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
             + EA +LF  +       D+  +N+++DG C +G +E A  L + +    + P+ VT+
Sbjct: 473 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 532

Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
           + ++ G C +G++++AR L  +M+   + P+ I+++ LI G+ R  +      +  +M  
Sbjct: 533 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 592

Query: 443 INVMPDASIVSIVVDLLAKNE 463
           I   P     + ++  L KN+
Sbjct: 593 IGFNPTLLTYNALIKCLCKNQ 613



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 212/448 (47%), Gaps = 6/448 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R    F     + +    P   T   ++      +R+  A  L+ ++        V+T+ 
Sbjct: 194 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 253

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            +VN LC+      A      M       G+  +PN V+Y TII G    G ++ A+ +L
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFME------GLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 307

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
             M+ K I+P+  TY S+I G C      EA  LF +M++ G+ PN VT+N ++D  C  
Sbjct: 308 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNK 367

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G ++ A    D M++ G+ P   TYN L+    + GR+  A ++   M   G      +Y
Sbjct: 368 GDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY 427

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +ILINGY +    + A  L++EMLSKGI+P  V + +L   L   ++++ A  LF+++  
Sbjct: 428 NILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD 487

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
            GV+ D   +   +DG C NG +  A  L   +       D   +N+L+ G C+ G++E 
Sbjct: 488 QGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE 547

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A  L   +    + P+ ++Y+ +I G    G +  A  +  +M      P ++T++ LI+
Sbjct: 548 ARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIK 607

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDAS 450
              +  E     ELL +M    + PD S
Sbjct: 608 CLCKNQEGDLAEELLKEMVNKGISPDDS 635



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 190/373 (50%), Gaps = 6/373 (1%)

Query: 19  FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
           F P+ V++ ++I G  +   I  A  +   +RV G EPD +TY +L++G+C+      A 
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 339

Query: 79  NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
            LF++M     E G+V  PN VTY T+IDG C +G +++A     +M  K I P+V TY 
Sbjct: 340 GLFDKMV----EIGLV--PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 393

Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
            ++          EA  +  EM  +G+ P+ +T+N++++   + G   +A  L + M+  
Sbjct: 394 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK 453

Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
           G+ P   TY +L+       R+  A +LF  +   G    V  ++ +++G+C N  +E A
Sbjct: 454 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERA 513

Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
             L  EM  K + PD V  NTL  G     +VE A  L DEM+R G+  D  +Y T I G
Sbjct: 514 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 573

Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
             + G I +A  +   +  +     +  YN+LI  LCK+   ++A EL + +    + P+
Sbjct: 574 YGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 633

Query: 379 VVTYSIMIGGLCN 391
             TY  +I G+ N
Sbjct: 634 DSTYLSLIEGMGN 646



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 167/336 (49%), Gaps = 29/336 (8%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           PD+ T+ SLI G+C E R+ EA+ LF K+   G  P+  TY TL++G C       A + 
Sbjct: 317 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 376

Query: 81  FEEMANGN------------------GEFGVVCE-----------PNTVTYTTIIDGLCK 111
            +EM                      G  G   +           P+ +TY  +I+G  +
Sbjct: 377 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 436

Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
            G   KA +L  +M  K I+P  VTYTS+I          EA  LF +++DQGV P+V+ 
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 496

Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
           FN ++D  C NG ++ A  LL  M +  V PD  T+NTL+ G C  G+V  A+ L   M+
Sbjct: 497 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 556

Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
             G K    SY+ LI+GY +  +I+ A  +  EMLS G  P ++ +N L   L +  + +
Sbjct: 557 RRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGD 616

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
            A +L  EM   G++ D  TY + I+G+     +VE
Sbjct: 617 LAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 192/412 (46%), Gaps = 40/412 (9%)

Query: 74  TIVALN--LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
           T +A N  LF+E+        V    +++ +  ++   C+    D+A +    MK+K I 
Sbjct: 155 TRIATNRELFDELTLSRDRLSV---KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV 211

Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE---- 187
           P + T   ++  F        A  L+ EM    +   V TFN++++ LCK GK+ +    
Sbjct: 212 PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREF 271

Query: 188 -------------------------------ASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
                                          A R+LD M   G+ PD++TY +L+ G C 
Sbjct: 272 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 331

Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
            GR+  A  LF  M  +G      +Y+ LI+GYC   ++E A S   EM+ KGI P V  
Sbjct: 332 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 391

Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
           +N L   LF   ++  A  +  EM++ G+  D  TY   I+G  + G   +A +L + + 
Sbjct: 392 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 451

Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
               E     Y SLI  L +  R++ A +LF  +    + P+V+ ++ M+ G C +G ++
Sbjct: 452 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVE 511

Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
           +A  L  +M+  +V P+ +TF+ L++G  R  +  +   LL +MK   + PD
Sbjct: 512 RAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 563


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 213/401 (53%), Gaps = 8/401 (1%)

Query: 64  LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
           +V  LCR  +   A+ +F  M++ N      C  +  TY+T++ GLC EG +D+A  LL 
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRN------CVADGYTYSTLMHGLCNEGRIDEAVSLLD 59

Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
           +M+ +   PN V +  +I   C   D + A +L   M  +G  PN VT+N ++  LC  G
Sbjct: 60  EMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKG 119

Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
           K+D+A  LL+ M+ +   P+  T+ TL+DGF   GR      + VS+E  G +   FSYS
Sbjct: 120 KLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYS 179

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G  K  + E  + L+ EM+ KG KP+ ++++ L  GL    + + A +   EM+  
Sbjct: 180 SLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK 239

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   +++TY + + G  + G I +A+ ++  +    C      Y+ LI+GLCK+G+L+ A
Sbjct: 240 GHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEA 299

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM--EENAVVPNVITFDMLI 421
           L +++ +    +  +VV YS MI G CN   +++   LF  M      + P+V+T+++L+
Sbjct: 300 LIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILL 359

Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
             F   N  S+ I++L+ M +    PD     I +  L  N
Sbjct: 360 NAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDN 400



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 202/396 (51%), Gaps = 8/396 (2%)

Query: 29  LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
           ++  LC    + +A  +F  +    C  D +TY+TL++GLC       A++L +EM    
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM-QVE 64

Query: 89  GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
           G F     PN V +  +I  LCK+G + +A +L+  M  K   PN VTY S++ G C   
Sbjct: 65  GTF-----PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKG 119

Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
             ++A  L   M+     PN +TF  ++D   K+G+  +  R+L  + + G R + F+Y+
Sbjct: 120 KLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYS 179

Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
           +L+ G    G+  H  +L+  M   GCK     YS LI+G C+  + + A     EM +K
Sbjct: 180 SLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK 239

Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           G  P+   +++L  G FE   + +A  ++ EM  N        Y   I+GLCKNG + EA
Sbjct: 240 GHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEA 299

Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC--GVLVPNVVTYSIMI 386
           + ++  +     + D+ AY+S+I G C +  +E  ++LF  + C    L P+VVTY+I++
Sbjct: 300 LIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILL 359

Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
              C    + +A D+   M +    P+ IT D+ ++
Sbjct: 360 NAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLK 395



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 178/344 (51%), Gaps = 8/344 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           GR+     +L  +      P+ V F  LI  LC +  +  A+ L   + + GC P+  TY
Sbjct: 49  GRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTY 108

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            +LV+GLC       A++L   M          C PN +T+ T++DG  K G       +
Sbjct: 109 NSLVHGLCLKGKLDKAMSLLNRMVANK------CVPNDITFGTLVDGFVKHGRALDGVRV 162

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           L+ +++K  + N  +Y+S+I G           +L+ EM+++G +PN + ++ ++D LC+
Sbjct: 163 LVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCR 222

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            GK DEA   L  M   G  P++FTY++L+ G+   G ++ A  ++  M    C H    
Sbjct: 223 EGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVC 282

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM- 300
           YSILING CKN +++ AL ++ +MLS+GIK DVV ++++  G      VE+  KLF++M 
Sbjct: 283 YSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 342

Query: 301 -QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
                +  D  TY   ++  C    +  A+++ +T+    C+ D
Sbjct: 343 CHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPD 386



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 80/161 (49%)

Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
            LC+ G + +AVE+F  +    C  D   Y++L+ GLC  GR++ A+ L   +      P
Sbjct: 9   ALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFP 68

Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
           N V ++++I  LC  G + +A  L  +M     VPN +T++ L+ G     +  K + LL
Sbjct: 69  NPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLL 128

Query: 438 HKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
           ++M     +P+      +VD   K+  +L+ +      E++
Sbjct: 129 NRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEK 169


>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 214/443 (48%), Gaps = 10/443 (2%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           C TP   T++  I  LC  +RI     L T +  FGC PD +     V+ LC  +    A
Sbjct: 227 CLTP--FTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDA 284

Query: 78  LNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           L + E+M   G G       P+ VTYTT++  LC      +A  L  +M  + +KP+VV 
Sbjct: 285 LQMVEKMTMKGTG-------PDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVA 337

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
             ++I G C  +  +EA  L   M+   +Q NV  +N ++    + G +++A + +  M 
Sbjct: 338 CGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQ 397

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           ++G  PD  TYN LL+ +C  G  + A+ L   ME  G     +SY+IL+ G CK  +++
Sbjct: 398 RNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLD 457

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A +  S+ +  G   D+V  N L        +V  A  LF EM   G+ AD  TY   I
Sbjct: 458 KAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILI 517

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GL   GY   A ELF  +   K   ++  YN ++  LCK G  + A ++F  +    + 
Sbjct: 518 NGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVS 577

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+ VT++ +I  L    +  +A DLF +M    V P+ +TF  +I G +   + +   E+
Sbjct: 578 PDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEI 637

Query: 437 LHKMKEINVMPDASIVSIVVDLL 459
              M E  ++ D  +   ++ +L
Sbjct: 638 WEYMMENGIILDRDVSERLISVL 660



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 202/462 (43%), Gaps = 6/462 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LGR+           +  L+ G     +       F ++   GC      Y   +  + +
Sbjct: 148 LGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIK 207

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                   +L E+  N     G    P   TY+  I  LC+   ++  +ELL  M     
Sbjct: 208 N----CCFDLVEKYYNMALAKGFCLTP--FTYSRWITALCQSNRIELVEELLTDMDKFGC 261

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            P+       +   C      +A ++  +M  +G  P+VVT+  ++  LC + +  EA  
Sbjct: 262 FPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVG 321

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L + M++ G++PD      L+ G C   +V+ A EL   M ++  +  V  Y+ LI+G+ 
Sbjct: 322 LWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFW 381

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           +   IE A    S M   G +PDVV +N L      I   ++A  L  +M+ +GV  D +
Sbjct: 382 RAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRY 441

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           +Y   + GLCK   + +A         +    DI + N LID  C++ ++  AL LF+ +
Sbjct: 442 SYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEM 501

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               +  + VTY I+I GL   G  + A +LF  M    +VPNV  +++++    ++   
Sbjct: 502 GYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHF 561

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
               ++  +M +  V PD    + ++  L K+  ++ +L  F
Sbjct: 562 KHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLF 603



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 163/342 (47%)

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E L +++ + +  +   Y  ++ G+  A  ++     F EM+  G +   V +N  +  +
Sbjct: 146 EFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVM 205

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
            KN   D   +  ++ +  G     FTY+  +   C + R+   +EL   M+  GC    
Sbjct: 206 IKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDF 265

Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
           ++ +I ++  C +  +  AL +  +M  KG  PDVV + T+   L +  +   A  L++E
Sbjct: 266 WACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEE 325

Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
           M R G+  D       I GLCKN  + EA EL   +  L  + ++  YN+LI G  ++G 
Sbjct: 326 MVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGS 385

Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
           +E A +    +      P+VVTY+I++   C+ G  DKA +L   ME + V P+  ++++
Sbjct: 386 IEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNI 445

Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           L++G  + ++  K    +    E+    D    +I++D   +
Sbjct: 446 LLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCR 487



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 144/306 (47%), Gaps = 6/306 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V   F +  R+L      +   + +LI G      I +A    + ++  GCEPDV TY 
Sbjct: 350 KVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYN 409

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+N  C    T  A NL  +M       GV   P+  +Y  ++ GLCK   +DKA   +
Sbjct: 410 ILLNHYCSIGMTDKAENLIRKMEMS----GV--NPDRYSYNILLKGLCKAHQLDKAFAFV 463

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
               +     ++V+   +I  FC AK  N A  LF EM  +G+Q + VT+ ++++ L   
Sbjct: 464 SDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGI 523

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G  + A  L D M+   + P+   YN +L   C  G   HA+++F  M          ++
Sbjct: 524 GYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTF 583

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI    K+     AL L+ EM +KG++PD +    +  GL +  +   A+++++ M  
Sbjct: 584 NTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMME 643

Query: 303 NGVAAD 308
           NG+  D
Sbjct: 644 NGIILD 649



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 6/272 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   +  +  + ++   PD VT+  L+   C+     +A  L  K+ + G  PD ++Y
Sbjct: 384 GSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSY 443

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLC+      A     +    + E G  C+   V+   +ID  C+   V+ A  L
Sbjct: 444 NILLKGLCKAHQLDKAFAFVSD----HMEVGGFCD--IVSCNILIDAFCRAKKVNSALNL 497

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K I+ + VTY  +I G       N A+ LF +M++  + PNV  +N+++  LCK
Sbjct: 498 FKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCK 557

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A ++   M Q  V PD  T+NTL+     + R   A +LF  M + G +    +
Sbjct: 558 VGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLT 617

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +  +I+G     +   A  ++  M+  GI  D
Sbjct: 618 FRYIISGLLDEGKATLAYEIWEYMMENGIILD 649



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%)

Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
           S  L  +   GV      Y  LL G+   G+ +   E F  M + GC+     Y+  I  
Sbjct: 145 SEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGV 204

Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
             KN   +     Y+  L+KG       ++     L + +++E   +L  +M + G   D
Sbjct: 205 MIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPD 264

Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
            W    ++  LC +  + +A+++   + +     D+  Y +++  LC   R   A+ L+ 
Sbjct: 265 FWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWE 324

Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
            +    L P+VV    +I GLC + ++D+A +L   M    +  NV  ++ LI GF R  
Sbjct: 325 EMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAG 384

Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVD 457
              K  + +  M+     PD    +I+++
Sbjct: 385 SIEKAYKTVSFMQRNGCEPDVVTYNILLN 413



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G   H   +  ++ +   +PD VTF +LI  L   SR +EA  LF ++R  G EPD  T
Sbjct: 558 VGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLT 617

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM 84
           +  +++GL       +A  ++E M
Sbjct: 618 FRYIISGLLDEGKATLAYEIWEYM 641


>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 214/443 (48%), Gaps = 10/443 (2%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           C TP   T++  I  LC  +RI     L T +  FGC PD +     V+ LC  +    A
Sbjct: 227 CLTP--FTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDA 284

Query: 78  LNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
           L + E+M   G G       P+ VTYTT++  LC      +A  L  +M  + +KP+VV 
Sbjct: 285 LQMVEKMTMKGTG-------PDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVA 337

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
             ++I G C  +  +EA  L   M+   +Q NV  +N ++    + G +++A + +  M 
Sbjct: 338 CGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQ 397

Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
           ++G  PD  TYN LL+ +C  G  + A+ L   ME  G     +SY+IL+ G CK  +++
Sbjct: 398 RNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLD 457

Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
            A +  S+ +  G   D+V  N L        +V  A  LF EM   G+ AD  TY   I
Sbjct: 458 KAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILI 517

Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
           +GL   GY   A ELF  +   K   ++  YN ++  LCK G  + A ++F  +    + 
Sbjct: 518 NGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVS 577

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+ VT++ +I  L    +  +A DLF +M    V P+ +TF  +I G +   + +   E+
Sbjct: 578 PDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEI 637

Query: 437 LHKMKEINVMPDASIVSIVVDLL 459
              M E  ++ D  +   ++ +L
Sbjct: 638 WEYMMENGIILDRDVSERLISVL 660



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 202/462 (43%), Gaps = 6/462 (1%)

Query: 11  LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
           LGR+           +  L+ G     +       F ++   GC      Y   +  + +
Sbjct: 148 LGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIK 207

Query: 71  TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
                   +L E+  N     G    P   TY+  I  LC+   ++  +ELL  M     
Sbjct: 208 N----CCFDLVEKYYNMALAKGFCLTP--FTYSRWITALCQSNRIELVEELLTDMDKFGC 261

Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
            P+       +   C      +A ++  +M  +G  P+VVT+  ++  LC + +  EA  
Sbjct: 262 FPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVG 321

Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
           L + M++ G++PD      L+ G C   +V+ A EL   M ++  +  V  Y+ LI+G+ 
Sbjct: 322 LWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFW 381

Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
           +   IE A    S M   G +PDVV +N L      I   ++A  L  +M+ +GV  D +
Sbjct: 382 RAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRY 441

Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
           +Y   + GLCK   + +A         +    DI + N LID  C++ ++  AL LF+ +
Sbjct: 442 SYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEM 501

Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
               +  + VTY I+I GL   G  + A +LF  M    +VPNV  +++++    ++   
Sbjct: 502 GYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHF 561

Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
               ++  +M +  V PD    + ++  L K+  ++ +L  F
Sbjct: 562 KHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLF 603



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 165/352 (46%), Gaps = 4/352 (1%)

Query: 114 FVDKAKELLLQMKDKNIKPNVVTYTSVIR----GFCYAKDWNEAKRLFIEMMDQGVQPNV 169
           FVD    LLL+   +     V  + S+ R    G+  A  ++     F EM+  G +   
Sbjct: 136 FVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFG 195

Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
           V +N  +  + KN   D   +  ++ +  G     FTY+  +   C + R+   +EL   
Sbjct: 196 VDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTD 255

Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
           M+  GC    ++ +I ++  C +  +  AL +  +M  KG  PDVV + T+   L +  +
Sbjct: 256 MDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRR 315

Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
              A  L++EM R G+  D       I GLCKN  + EA EL   +  L  + ++  YN+
Sbjct: 316 FSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNA 375

Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
           LI G  ++G +E A +    +      P+VVTY+I++   C+ G  DKA +L   ME + 
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSG 435

Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
           V P+  ++++L++G  + ++  K    +    E+    D    +I++D   +
Sbjct: 436 VNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCR 487



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 144/306 (47%), Gaps = 6/306 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           +V   F +  R+L      +   + +LI G      I +A    + ++  GCEPDV TY 
Sbjct: 350 KVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYN 409

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L+N  C    T  A NL  +M       GV   P+  +Y  ++ GLCK   +DKA   +
Sbjct: 410 ILLNHYCSIGMTDKAENLIRKMEMS----GV--NPDRYSYNILLKGLCKAHQLDKAFAFV 463

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
               +     ++V+   +I  FC AK  N A  LF EM  +G+Q + VT+ ++++ L   
Sbjct: 464 SDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGI 523

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G  + A  L D M+   + P+   YN +L   C  G   HA+++F  M          ++
Sbjct: 524 GYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTF 583

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           + LI    K+     AL L+ EM +KG++PD +    +  GL +  +   A+++++ M  
Sbjct: 584 NTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMME 643

Query: 303 NGVAAD 308
           NG+  D
Sbjct: 644 NGIILD 649



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 6/272 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G +   +  +  + ++   PD VT+  L+   C+     +A  L  K+ + G  PD ++Y
Sbjct: 384 GSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSY 443

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             L+ GLC+      A     +    + E G  C+   V+   +ID  C+   V+ A  L
Sbjct: 444 NILLKGLCKAHQLDKAFAFVSD----HMEVGGFCD--IVSCNILIDAFCRAKKVNSALNL 497

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
             +M  K I+ + VTY  +I G       N A+ LF +M++  + PNV  +N+++  LCK
Sbjct: 498 FKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCK 557

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G    A ++   M Q  V PD  T+NTL+     + R   A +LF  M + G +    +
Sbjct: 558 VGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLT 617

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           +  +I+G     +   A  ++  M+  GI  D
Sbjct: 618 FRYIISGLLDEGKATLAYEIWEYMMENGIILD 649



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G   H   +  ++ +   +PD VTF +LI  L   SR +EA  LF ++R  G EPD  T
Sbjct: 558 VGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLT 617

Query: 61  YTTLVNGLCRTSHTIVALNLFEEM 84
           +  +++GL       +A  ++E M
Sbjct: 618 FRYIISGLLDEGKATLAYEIWEYM 641


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 218/466 (46%), Gaps = 26/466 (5%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     +  ++ KS FTPD   +  +I GLC    + +A  L+++++ F  +PDV   T
Sbjct: 185 RVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVT 244

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            L++   +          FEEM           + +T+ Y ++++ L   G V KA  LL
Sbjct: 245 KLISSFSKEEELTC---FFEEMHEDMDP-----KASTLLYNSVLNSLVDNGSVHKAYHLL 296

Query: 123 LQMKDKN----------------IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
             +   N                + PN  T++ VI G     D + A  LF +M   G +
Sbjct: 297 QAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCK 356

Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
           P+++ +N ++D LC + ++ E+  LL  M + G+ P +FT N +    C    ++ A  L
Sbjct: 357 PDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHL 416

Query: 227 FVSMESMGCKHTVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
              M   G    +   + L+   CK+ KE+E A     +M  +G +PD+V ++    GL 
Sbjct: 417 LKKMRIHGHVPWIKHSTSLVKELCKHGKEVE-ACKFLVDMAEEGFQPDIVAYSACLDGLI 475

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
           +I +V++A KLF ++   G   D   Y   I GLCK   I EA  L H +          
Sbjct: 476 KIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAV 535

Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
            YN+LIDGLCK+  LE A+     +      PNV+TYS +I GLCN G+ D A  L+ +M
Sbjct: 536 TYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEM 595

Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
                 P+ I +   I G      P++ +  L +M+E  + PD  +
Sbjct: 596 GRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYV 641



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 202/447 (45%), Gaps = 36/447 (8%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           TF SLI G   ESR+ +A  LF K++  G  PD+  Y  ++ GLC       AL L+ EM
Sbjct: 172 TFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEM 231

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEG----FVDKAKELLLQMKDKNIKPNVVTYTSV 140
                  G   +P+    T +I    KE     F ++  E      D + K + + Y SV
Sbjct: 232 K------GFKIQPDVKIVTKLISSFSKEEELTCFFEEMHE------DMDPKASTLLYNSV 279

Query: 141 IRGFCYAKDWNEAKRLF-------------IEMMDQG---VQPNVVTFNVIMDELCKNGK 184
           +         ++A  L              I  + +G   V PN  TF+++++ L K G 
Sbjct: 280 LNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGD 339

Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +D A  L   M + G +PD   YN L+DG C + R+  +  L   ME  G + T F+ + 
Sbjct: 340 LDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNC 399

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE-RAFKLFDEMQRN 303
           +    C+  +I GAL L  +M   G  P  + H+T  V     H  E  A K   +M   
Sbjct: 400 IFGCLCRRHDISGALHLLKKMRIHGHVP-WIKHSTSLVKELCKHGKEVEACKFLVDMAEE 458

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G   D   Y   +DGL K   + +A++LF  +       D+ AYN LI GLCK+ R+  A
Sbjct: 459 GFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEA 518

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVPNVITFDMLIR 422
             L   +    LVP+ VTY+ +I GLC    +++A  LFL M  E    PNVIT+  LI 
Sbjct: 519 QNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAM-LFLSMMIEKEREPNVITYSTLIN 577

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDA 449
           G      P   + L ++M      P +
Sbjct: 578 GLCNAGRPDDALVLWNEMGRKGCTPSS 604



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 213/456 (46%), Gaps = 28/456 (6%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D   F+ L+       ++ +A  L   +       +  T+ +L+ G  + S    AL+LF
Sbjct: 134 DEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLF 193

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           ++M            P+   Y  II GLC    V KA  L  +MK   I+P+V   T +I
Sbjct: 194 DKMKKSG------FTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLI 247

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVT--FNVIMDELCKNGKMDEASRLLDLM---- 195
             F       E    F E M + + P   T  +N +++ L  NG + +A  LL  +    
Sbjct: 248 SSF----SKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGN 303

Query: 196 -IQHG-----------VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
            I  G           V P++ T++ +++G   TG ++ A  LF  M  +GCK  +  Y+
Sbjct: 304 CIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYN 363

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
            LI+G C +  ++ +  L  EM   GI+P    +N +F  L   H +  A  L  +M+ +
Sbjct: 364 NLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIH 423

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G         + +  LCK+G  VEA +    +     + DI AY++ +DGL K   ++ A
Sbjct: 424 GHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQA 483

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
           L+LF+ +      P+V+ Y+I+I GLC   ++ +A++L  +MEE  +VP+ +T++ LI G
Sbjct: 484 LKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDG 543

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
             + +   + +  L  M E    P+    S +++ L
Sbjct: 544 LCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGL 579



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 169/359 (47%), Gaps = 6/359 (1%)

Query: 56  PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
           P+  T++ ++NGL +T    +A+ LF +MA       + C+P+ + Y  +IDGLC    +
Sbjct: 322 PNSTTFSIVINGLIKTGDLDLAVGLFRDMAR------IGCKPDLLLYNNLIDGLCTSNRL 375

Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
            ++  LL +M++  I+P   T   +    C   D + A  L  +M   G  P +     +
Sbjct: 376 QESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSL 435

Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
           + ELCK+GK  EA + L  M + G +PD   Y+  LDG      V+ A +LF  + + G 
Sbjct: 436 VKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGY 495

Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
              V +Y+ILI G CK + I  A +L  EM  KG+ P  V +NTL  GL +   +E A  
Sbjct: 496 CPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAML 555

Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
               M       +  TY T I+GLC  G   +A+ L++ +    C     AY + I GL 
Sbjct: 556 FLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLS 615

Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
             GR   AL   R +    + P+   Y  ++     D     A ++  +M +    P++
Sbjct: 616 NCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDL 674



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 209/460 (45%), Gaps = 29/460 (6%)

Query: 22  DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
           D  T T +++  C  +   +A  +F ++   G   D + ++ LV    +      A  L 
Sbjct: 100 DKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGW-VDEYVFSILVLAFSKWGKVDKACELI 158

Query: 82  EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
           E M   N         N  T+ ++I G  KE  VDKA  L  +MK     P++  Y  +I
Sbjct: 159 ETMEEKNVRL------NKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVII 212

Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
            G C  KD  +A  L+ EM    +QP+V     ++    K    +E +   + M    + 
Sbjct: 213 GGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKE---EELTCFFEEM-HEDMD 268

Query: 202 PDAFT--YNTLLDGFCLTGRVNHAKELFVSMESMGC----------------KHTVFSYS 243
           P A T  YN++L+     G V+ A  L  ++    C                     ++S
Sbjct: 269 PKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFS 328

Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
           I+ING  K  +++ A+ L+ +M   G KPD++++N L  GL   ++++ +  L  EM+ +
Sbjct: 329 IVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEES 388

Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
           G+   ++T       LC+   I  A+ L   +RI      I+   SL+  LCK G+   A
Sbjct: 389 GIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEA 448

Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
            +    +      P++V YS  + GL    ++D+A  LF D+      P+VI +++LI+G
Sbjct: 449 CKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKG 508

Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
             +    ++   LLH+M+E  ++P A   + ++D L K +
Sbjct: 509 LCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTD 548



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 183/365 (50%), Gaps = 21/365 (5%)

Query: 94  VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
           +C PN+ +YT +++ L K   +D  +  L +M D     +  T T V++ +C   ++++A
Sbjct: 61  LCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKA 120

Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
             +F E+ D+G     V F++++    K GK+D+A  L++ M +  VR +  T+ +L+ G
Sbjct: 121 LDVFNEIHDRGWVDEYV-FSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYG 179

Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
           F    RV+ A  LF  M+  G    +  Y ++I G C NK+++ AL LYSEM    I+PD
Sbjct: 180 FVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPD 239

Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRN-GVAADTWTYRTFIDGLCKNGYIVEAVELF 332
           V I   L   +    + E     F+EM  +    A T  Y + ++ L  NG + +A  L 
Sbjct: 240 VKIVTKL---ISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLL 296

Query: 333 HTLRILKCEFD----------------IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
             + I  C  D                   ++ +I+GL K+G L++A+ LFR +      
Sbjct: 297 QAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCK 356

Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
           P+++ Y+ +I GLC   ++ ++  L  +MEE+ + P   T + +     R ++ S  + L
Sbjct: 357 PDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHL 416

Query: 437 LHKMK 441
           L KM+
Sbjct: 417 LKKMR 421



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 8/257 (3%)

Query: 27  TSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM-A 85
           TSL+K LC   + +EA      +   G +PD+  Y+  ++GL +      AL LF+++ A
Sbjct: 433 TSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICA 492

Query: 86  NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
            G       C P+ + Y  +I GLCK   + +A+ LL +M++K + P+ VTY ++I G C
Sbjct: 493 QG------YC-PDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLC 545

Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
                 EA      M+++  +PNV+T++ +++ LC  G+ D+A  L + M + G  P + 
Sbjct: 546 KTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSI 605

Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
            Y   + G    GR N A      ME    K   + Y  L+N +  +     A  +  EM
Sbjct: 606 AYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEM 665

Query: 266 LSKGIKPDVVIHNTLFV 282
           + KG  PD+   N + V
Sbjct: 666 VDKGKFPDLHDKNHISV 682



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 6/206 (2%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
            V     +   I    + PD + +  LIKGLC   RI EA  L  ++   G  P   TY 
Sbjct: 479 EVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYN 538

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL++GLC+T H   A+     M           EPN +TY+T+I+GLC  G  D A  L 
Sbjct: 539 TLIDGLCKTDHLEEAMLFLSMMIEKER------EPNVITYSTLINGLCNAGRPDDALVLW 592

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +M  K   P+ + Y + I G       NEA     EM ++ ++P+   +  +++    +
Sbjct: 593 NEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVD 652

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYN 208
                A  +L  M+  G  PD    N
Sbjct: 653 SNQPLAFEILQEMVDKGKFPDLHDKN 678


>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
 gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 227/461 (49%), Gaps = 7/461 (1%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           R++  F+ L  ++     PD    T L+  LC  +++ +A  +   +   G  PD  + T
Sbjct: 77  RLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCT 136

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
            LVN LC+  +   A+ L E+M     E+G     NTVTY +++ GLC  G + ++ ++L
Sbjct: 137 FLVNNLCKRGNVGYAMQLVEKME----EYGY--PTNTVTYNSLVRGLCMHGNLSQSLQIL 190

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
            +   K + PNV TY+ ++      +  +EA RL  E++ +G +PN+V++NV++  LCK 
Sbjct: 191 DKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKE 250

Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
           G+ +EA +    +   G  P+  +YN LL   C  GR   AKEL   M+      ++ ++
Sbjct: 251 GRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTF 310

Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
           +ILI     + + + AL +  +M     K     +N +   L +  +V+   K  D+M  
Sbjct: 311 NILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMY 370

Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
                +  TY   I  LC+ G + EA  +  +L   +       Y  +I  LC+ G    
Sbjct: 371 RRCNPNEGTYNA-IAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYP 429

Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
           A +L   +     VP+  TYS +I GLC++G +D+A ++F  MEEN   P+V  F+ LI 
Sbjct: 430 AFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALIL 489

Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
           G  +  +    + +   M +   MP+ +  +I+V+ +A  E
Sbjct: 490 GLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQE 530



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 204/406 (50%), Gaps = 11/406 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G V +   ++ ++ +  +  + VT+ SL++GLC    + ++  +  K    G  P+VFTY
Sbjct: 146 GNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTY 205

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
           + L+    +      A+ L +E+    G+      PN V+Y  ++ GLCKEG  ++A + 
Sbjct: 206 SFLLEAAYKERGADEAIRLLDEIVAKGGK------PNLVSYNVLLTGLCKEGRTEEAMQF 259

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +  K   PNVV+Y  ++R  CY   W +AK L  EM      P++VTFN+++  L  
Sbjct: 260 FRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLAL 319

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
           +G+ D+A  +LD M +   +  A +YN ++   C  G+V+   +    M    C     +
Sbjct: 320 HGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGT 379

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
           Y+  I   C+  +++ A S+   + +K        +  +   L        AF+L  EM 
Sbjct: 380 YNA-IAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMT 438

Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
           + G   D++TY + I GLC  G + EA+E+F  +    C  D+  +N+LI GLCK  + +
Sbjct: 439 KYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTD 498

Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA----RDLFL 403
           ++L +F  +     +PN  TY+I++ G+ +  +M+ A    ++L+L
Sbjct: 499 LSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYL 544



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 154/311 (49%), Gaps = 1/311 (0%)

Query: 156 LFIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
           L++E M+ +G +P+      +M ELCK+ KM +A+++++LMI  G  PD  +   L++  
Sbjct: 83  LYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNL 142

Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
           C  G V +A +L   ME  G      +Y+ L+ G C +  +  +L +  + + KG+ P+V
Sbjct: 143 CKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNV 202

Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
             ++ L    ++    + A +L DE+   G   +  +Y   + GLCK G   EA++ F  
Sbjct: 203 FTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRD 262

Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
           L       ++ +YN L+  LC  GR E A EL   +  G   P++VT++I+IG L   GQ
Sbjct: 263 LPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQ 322

Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
            D+A ++  DM          +++ +I    +  +   V++ L +M      P+    + 
Sbjct: 323 TDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNA 382

Query: 455 VVDLLAKNEIS 465
           +  L  + ++ 
Sbjct: 383 IAVLCEEGKVQ 393


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 243/529 (45%), Gaps = 76/529 (14%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
           P    +  L++    E R+   + L+  + + G  P+ +T+  L+  LC +S    A  L
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 81  FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
           F+EM          C+PN  T+  ++ G CK G  DK  ELL  M+   + PN V Y ++
Sbjct: 170 FDEMPEKG------CKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTI 223

Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHG 199
           +  FC     +++++L  +M ++G+ P++VTFN  +  LCK GK+ +ASR+  D+ +   
Sbjct: 224 VSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283

Query: 200 V---RPDAFTYNTLLDGFCLTGRVNHAKELF---------VSMESM-------------- 233
           +   RP++ TYN +L GFC  G +  AK LF         VS++S               
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFI 343

Query: 234 ------------GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
                       G   +++SY+IL++G CK   +  A ++   M   G+ PD V +  L 
Sbjct: 344 EAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLL 403

Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
            G   + +V+ A  L  EM RN    + +T    +  L   G I EA EL   +      
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYG 463

Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFR------SLPCGVL-----------------VPN 378
            D    N ++DGLC SG L+ A+E+ +      S   G L                 +P+
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523

Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
           ++TYS ++ GLC  G+  +A+ LF +M    + P+ + +++ I  F +  + S    +L 
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLK 583

Query: 439 KMKEINVMPDASIV-SIVVDLLAKNEISLNSLPSFTVHEQQEEVDESNV 486
            M++           S+++ L  KN+I       F +H   +E+ E  +
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQI-------FEIHGLMDEMREKGI 625



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 226/470 (48%), Gaps = 25/470 (5%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G    G  +L  +      P+ V + +++   C E R  ++  L  K+R  G  PD+ T+
Sbjct: 196 GLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTF 255

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            + ++ LC+    + A  +F +M     E+  +  PN++TY  ++ G CK G ++ AK L
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELD--EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
              +++ +   ++ +Y   ++G      + EA+ +  +M+D+G+ P++ ++N++MD LCK
Sbjct: 314 FESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCK 373

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
            G + +A  ++ LM ++GV PDA TY  LL G+C  G+V+ AK L   M    C    ++
Sbjct: 374 LGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433

Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
            +IL++       I  A  L  +M  KG   D V  N +  GL    ++++A ++   M+
Sbjct: 434 CNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493

Query: 302 RNGVAA-----------------------DTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
            +G AA                       D  TY T ++GLCK G   EA  LF  +   
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGE 553

Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
           K + D  AYN  I   CK G++  A  + + +       ++ TY+ +I GL    Q+ + 
Sbjct: 554 KLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI 613

Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
             L  +M E  + PN+ T++  I+      +      LL +M + N+ P+
Sbjct: 614 HGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPN 663



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/551 (24%), Positives = 228/551 (41%), Gaps = 92/551 (16%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV---FGC-EPD 57
           GR      ++ ++ +    PD VTF S I  LC E ++++A+ +F+ + +    G   P+
Sbjct: 231 GRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPN 290

Query: 58  VFTYTTLVNGLC---------------RTSHTIVALNLFEEMANGNGEFGVVCEPNTV-- 100
             TY  ++ G C               R +  +V+L  +     G    G   E  TV  
Sbjct: 291 SITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLK 350

Query: 101 ------------TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
                       +Y  ++DGLCK G +  AK ++  MK   + P+ VTY  ++ G+C   
Sbjct: 351 QMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVG 410

Query: 149 DWNEAKRLFIEMMDQGVQPNV-----------------------------------VTFN 173
             + AK L  EMM     PN                                    VT N
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCN 470

Query: 174 VIMDELCKNGKMDEASRLL-----------------------DLMIQHGVRPDAFTYNTL 210
           +I+D LC +G++D+A  ++                       D +I++   PD  TY+TL
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530

Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
           L+G C  GR   AK LF  M     +    +Y+I I+ +CK  +I  A  +  +M  KG 
Sbjct: 531 LNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
              +  +N+L +GL   +Q+     L DEM+  G++ +  TY T I  LC+ G + +A  
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATN 650

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
           L   +       ++ ++  LI   CK    ++A E+F +    +       YS+M   L 
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFET-AVSICGQKEGLYSLMFNELL 709

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             GQ+ KA +L   + +         +  L+    + +E      +LHKM +     D +
Sbjct: 710 AAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPA 769

Query: 451 IVSIVVDLLAK 461
            +  V+D L K
Sbjct: 770 ALMPVIDGLGK 780



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 182/391 (46%), Gaps = 40/391 (10%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G +S    ++G + ++  +PDAVT+  L+ G C+  ++  A +L  ++    C P+ +T
Sbjct: 374 LGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
              L++ L        A  L  +M N  G +G+    +TVT   I+DGLC  G +DKA E
Sbjct: 434 CNILLHSLWNMGRISEAEELLRKM-NEKG-YGL----DTVTCNIIVDGLCGSGELDKAIE 487

Query: 121 LLLQMK-----------------------DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
           ++  M+                       + N  P+++TY++++ G C A  + EAK LF
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLF 547

Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
            EMM + +QP+ + +N+ +   CK GK+  A R+L  M + G      TYN+L+ G  + 
Sbjct: 548 AEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607

Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
            ++     L   M   G    + +Y+  I   C+  ++E A +L  EM+ K I P+V   
Sbjct: 608 NQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSF 667

Query: 278 NTLFVGLFEIHQVERAFKLFDEM-----QRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
             L     ++   + A ++F+       Q+ G+      Y    + L   G +++A EL 
Sbjct: 668 KYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATELL 721

Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
             +     E     Y  L+  LCK   LE+A
Sbjct: 722 EAVLDRGFELGTFLYKDLVVSLCKKDELEVA 752



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 159/333 (47%), Gaps = 39/333 (11%)

Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
           +P +  +NV+++   +  +++  S L   M+  G+ P+ +T+N L+   C +  V+ A+E
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
           LF  M   GCK   F++ IL+ GYCK    +  L L + M S G+ P+ V++NT+     
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
              + + + KL ++M+  G+  D  T+ + I  LCK G +++A  +F  + + +     R
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 346 ----AYNSLIDGLCKSGRLEIALELFRSL--------------------PCGVLV----- 376
                YN ++ G CK G LE A  LF S+                      G  +     
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 377 ----------PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
                     P++ +Y+I++ GLC  G +  A+ +   M+ N V P+ +T+  L+ G+  
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408

Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
           + +      LL +M   N +P+A   +I++  L
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)

Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
           KP + ++N L        +VE    L+ +M   G++ +T+T+                  
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTF------------------ 150

Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
                            N LI  LC S  ++ A ELF  +P     PN  T+ I++ G C
Sbjct: 151 -----------------NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193

Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
             G  DK  +L   ME   V+PN + ++ ++  F R        +L+ KM+E  ++PD  
Sbjct: 194 KAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIV 253

Query: 451 IVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
             +  +  L K    L++   F+  E  E
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDE 282


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 187/349 (53%), Gaps = 6/349 (1%)

Query: 25  TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
           TF+ LI          +A   F K++ FGC+PDVFTY ++++ + +    ++AL ++ +M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192

Query: 85  ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
              N        PN  T+  +++GLCK G  D A ++  +M  K I PN + YT ++ G 
Sbjct: 193 LKLNYN------PNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGL 246

Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
           C AK  ++  RL   M   G  P+ +T N ++D  CK G++DEA  LL L  + G     
Sbjct: 247 CQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGI 306

Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
             Y++L+DG     R +  +E    M   G +  V  Y+ILI G+C+   ++ AL++ ++
Sbjct: 307 KGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLND 366

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M  +G+ PD   +N L  G  ++  +++A  L  E+ +N     + TY   I G+C+NG 
Sbjct: 367 MTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGL 426

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           + EA ++F+ +  L C   I  +N+LIDGLCK+G LE A  LF  +  G
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIG 475



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 230/510 (45%), Gaps = 82/510 (16%)

Query: 7   GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
              V  ++LK  + P+  TF  L+ GLC   +  +A  +F ++   G  P+   YT +++
Sbjct: 185 ALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILS 244

Query: 67  GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
           GLC+   T     L   M          C P+++T   ++DG CK G +D+A  LL   +
Sbjct: 245 GLCQAKRTDDVHRLLNTMKVSG------CCPDSITCNALLDGFCKLGQIDEAFALLQLFE 298

Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
            +     +  Y+S+I G   AK ++E +    +M   G++P+VV + +++   C+ G +D
Sbjct: 299 KEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVD 358

Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
            A  +L+ M Q G+ PD + YN L+ GFC  G ++ A+ L + +    C  T  +Y+ILI
Sbjct: 359 YALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILI 418

Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE-------------------- 286
            G C+N  ++ A  ++++M + G  P ++  N L  GL +                    
Sbjct: 419 CGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNP 478

Query: 287 -------------------IHQVER---AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
                               H+V+R   AF++ D+M +NG    +  Y+  +   C+ G 
Sbjct: 479 SLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGK 538

Query: 325 IVEAVELF------------HTLRI-------------LKC---------EFDIRAYNSL 350
           +  A  L+             TL++             ++C          F+I  Y   
Sbjct: 539 LSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIW 598

Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
           + GLC++ R E AL++F  L    +  N  +  ++I GLC DG ++ A D+FL   E   
Sbjct: 599 LIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGF 658

Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKM 440
           +      + L+R  I  ++    ++LL++M
Sbjct: 659 MLMPRICNQLLRSLILQDKMKHALDLLNRM 688



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 202/437 (46%), Gaps = 54/437 (12%)

Query: 60  TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
           T+  +++ L +         + EE+ N N +   +  P   T++ +I    K G  +KA 
Sbjct: 98  THNLVIDMLAKDDGFDTYWKILEELKNSNIQ---IPPP---TFSVLIAAYAKSGMAEKAV 151

Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
           E   +MKD   KP+V TY S++      + +  A  ++ +M+     PN  TF ++++ L
Sbjct: 152 ESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGL 211

Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
           CKNGK D+A ++ D M Q G+ P+   Y  +L G C   R +    L  +M+  GC    
Sbjct: 212 CKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDS 271

Query: 240 FSYSILINGYCKNKEIEGALSL---------------YS--------------------E 264
            + + L++G+CK  +I+ A +L               YS                    +
Sbjct: 272 ITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRK 331

Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
           M   GI+PDVV++  L  G  E+  V+ A  + ++M + G++ DT+ Y   I G C  G 
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGL 391

Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
           + +A  L   +    C      Y  LI G+C++G L+ A ++F  +      P+++T++ 
Sbjct: 392 LDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNA 451

Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR----------GFIRINEPSKVI 434
           +I GLC  G++++AR LF  ME   +  N   F  L +          GF R++      
Sbjct: 452 LIDGLCKAGELEEARHLFYKME---IGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAF 508

Query: 435 ELLHKMKEINVMPDASI 451
            +L +M +    P +++
Sbjct: 509 RVLDQMVKNGCTPSSAV 525



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 182/378 (48%), Gaps = 22/378 (5%)

Query: 1   MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           +G++   F +L    K  +      ++SLI GL    R  E      K+   G EPDV  
Sbjct: 284 LGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVL 343

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           YT L+ G C       ALN+  +M            P+T  Y  +I G C  G +DKA+ 
Sbjct: 344 YTILIRGFCEVGMVDYALNMLNDMTQRG------LSPDTYCYNALIKGFCDVGLLDKARS 397

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L L++   +  P   TYT +I G C     +EA+++F +M + G  P+++TFN ++D LC
Sbjct: 398 LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLC 457

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTY-----NTLLDGFCLTGRVNHAKELFVSMESM-- 233
           K G+++EA  L   M + G  P  F       + ++D      RV+  ++ F  ++ M  
Sbjct: 458 KAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVK 516

Query: 234 -GCKHTVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIHNTLFVGLFEIHQVE 291
            GC  +   Y  L+   C+  ++  A SL+ + L S   + D  +   L    FE  ++E
Sbjct: 517 NGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLK--LAEEHFEKGELE 574

Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS-- 349
           +A +   EM       +   Y  ++ GLC+     EA+++F  L+  +C+ D+   +   
Sbjct: 575 KAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLK--ECQMDVNPPSCVM 632

Query: 350 LIDGLCKSGRLEIALELF 367
           LI+GLCK G LE+A+++F
Sbjct: 633 LINGLCKDGNLEMAVDIF 650



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 159/328 (48%)

Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
           VT+  VI        ++   ++  E+ +  +Q    TF+V++    K+G  ++A      
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
           M   G +PD FTYN++L           A  ++  M  +       ++ IL+NG CKN +
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
            + AL ++ EM  KGI P+ +I+  +  GL +  + +   +L + M+ +G   D+ T   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
            +DG CK G I EA  L            I+ Y+SLIDGL ++ R +   E  R +    
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
           + P+VV Y+I+I G C  G +D A ++  DM +  + P+   ++ LI+GF  +    K  
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
            L  ++ + +  P +   +I++  + +N
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRN 424



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 126/299 (42%), Gaps = 9/299 (3%)

Query: 18  CFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVA 77
           CF P + T+T LI G+C    + EA  +F ++   GC P + T+  L++GLC+      A
Sbjct: 407 CF-PTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465

Query: 78  LNLFEEMANG-NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
            +LF +M  G N    +             +G  +    + A  +L QM      P+   
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAV 525

Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
           Y  ++   C     + A  L+++ +         T   + +E  + G++++A R L   +
Sbjct: 526 YKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLK-LAEEHFEKGELEKAVRCL---L 581

Query: 197 QHGVRPDAF---TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
           +   + + F    Y   L G C   R   A ++F+ ++         S  +LING CK+ 
Sbjct: 582 EMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDG 641

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
            +E A+ ++   L KG      I N L   L    +++ A  L + M   G   D + +
Sbjct: 642 NLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLH 700



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 89/261 (34%), Gaps = 70/261 (26%)

Query: 20  TPDAVTFTSLIKGLCAESRIMEAAALFTKL------------------------------ 49
           +P  +TF +LI GLC    + EA  LF K+                              
Sbjct: 443 SPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVD 502

Query: 50  ------RVF------GCEPDVFTYTTLVNGLCRTSHTIVALNLF---------------- 81
                 RV       GC P    Y  L+   CR     VA +L+                
Sbjct: 503 REEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLK 562

Query: 82  ---EEMANGNGEFGVVC--EPN-------TVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
              E    G  E  V C  E N          YT  + GLC+    ++A ++ L +K+  
Sbjct: 563 LAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQ 622

Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
           +  N  +   +I G C   +   A  +F+  +++G        N ++  L    KM  A 
Sbjct: 623 MDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHAL 682

Query: 190 RLLDLMIQHGVRPDAFTYNTL 210
            LL+ M   G   D + ++ +
Sbjct: 683 DLLNRMNSAGYDLDEYLHHRI 703


>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 608

 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 221/450 (49%), Gaps = 11/450 (2%)

Query: 9   VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL 68
           V LG+   SC T    + T L+  L  + +  EA  +F  L   G  P + TYTTLV  L
Sbjct: 48  VCLGK--NSCRT--VHSRTKLMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAAL 103

Query: 69  CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
            +  H   ++ L       NG      +P+++ Y  +I+   + G V +A ++  +MKD 
Sbjct: 104 TKLKH-FESIFLLISKVEENG-----MKPDSILYNAMINAFSESGNVKEAMKIFQKMKDT 157

Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEA-KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
             KP   T+ ++I+G+  A    E  K L +  +D  V+PN  T+N+++   C    ++E
Sbjct: 158 GCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEE 217

Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
           A  +L  M+  G++PD  TYN L   +   G    A++L + M+         +  I++N
Sbjct: 218 AWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVN 277

Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
           GYCK   +  AL     M   G+ P++VI N+L  G  +I   +   +    M+  GV  
Sbjct: 278 GYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKP 337

Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
           D  T+ T ++     G + +  E+F+ +     E DI A++ L  G  ++G  E A  + 
Sbjct: 338 DVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVL 397

Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
            S+    + PNVV  + +I G C+ G+M+ A+ ++  M E  + PN+ TF+ LI G+   
Sbjct: 398 TSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEA 457

Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVD 457
            +P K  ELL  M+E  V P+ S + +V D
Sbjct: 458 RQPGKAEELLQLMEEKGVFPEKSTIQLVAD 487



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 195/427 (45%), Gaps = 7/427 (1%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G+     ++   +++    P  +T+T+L+  L           L +K+   G +PD   Y
Sbjct: 72  GKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILY 131

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
             ++N    + +   A+ +F++M +        C+P T T+ T+I G    G  ++  ++
Sbjct: 132 NAMINAFSESGNVKEAMKIFQKMKDTG------CKPTTSTFNTLIKGYGNAGKPEEGLKM 185

Query: 122 LLQMK-DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
           L  M  D ++KPN  TY  ++R +C  K+  EA  +  +M+  G+QP+VVT+N++     
Sbjct: 186 LHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYA 245

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
           + G+   A  L+  M    V P+  T   +++G+C  G +  A      M+ +G    + 
Sbjct: 246 QKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLV 305

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
            ++ LI G+    + +G     + M   G+KPDV+  +T+         +++  ++F++M
Sbjct: 306 IFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDM 365

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
            + G+  D   +     G  + G    A  +  ++       ++    ++I G C +G++
Sbjct: 366 AKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKM 425

Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
           E A  ++  +    + PN+ T+  +I G     Q  KA +L   MEE  V P   T  ++
Sbjct: 426 ENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQLV 485

Query: 421 IRGFIRI 427
              +  I
Sbjct: 486 ADAWRNI 492



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 158/328 (48%), Gaps = 7/328 (2%)

Query: 2   GRVSHGFVVLGRI-LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
           G+   G  +L  + L     P+  T+  L++  C++  I EA  +  K+   G +PDV T
Sbjct: 177 GKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVT 236

Query: 61  YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
           Y  L     +   T+ A +L  EM     ++  V  PN  T   I++G CKEG + +A  
Sbjct: 237 YNILARAYAQKGETLRAEDLILEM-----QYEKVA-PNERTCGIIVNGYCKEGNMIEALR 290

Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
            + +MK+  + PN+V + S+I+GF    D +        M + GV+P+V+TF+ IM+   
Sbjct: 291 FVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWS 350

Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
             G MD+   + + M + G+ PD   ++ L  G+   G   +A+ +  SM   G +  V 
Sbjct: 351 SAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVV 410

Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
             + +I+G+C   ++E A  +Y +M   GI P++    TL  G  E  Q  +A +L   M
Sbjct: 411 ICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLM 470

Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEA 328
           +  GV  +  T +   D     G + EA
Sbjct: 471 EEKGVFPEKSTIQLVADAWRNIGLLCEA 498


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 205/399 (51%), Gaps = 26/399 (6%)

Query: 53  GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
           G +PDV T+  L+  LC+      A+ + EEM++    +G+V  P+  T+TT++ G  +E
Sbjct: 188 GIKPDVSTFNILIKALCKAHQIRPAILVMEEMSS----YGLV--PDEKTFTTLMQGFIEE 241

Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
           G +D A  +  QM D       VT   ++ GFC      EA                ++F
Sbjct: 242 GNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEA----------------LSF 285

Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
              +DE+   GK   A  L + M   G +PD FTYN L+D  C  G++  A  L   ME 
Sbjct: 286 ---IDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEI 342

Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
            GC   V +Y+ LI+G+CKNK+IE A  ++ +M  +G+  + V +NTL  GL +  +V+ 
Sbjct: 343 SGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQE 402

Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
           A +L D+M   G+  D +TY + +   C+ G I +A ++  T+    CE DI  Y +LI 
Sbjct: 403 AAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIG 462

Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
           GLCK+GR+E+A  L RS+    +V     Y+ +I  L    +  +A  LF +MEE    P
Sbjct: 463 GLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTP 522

Query: 413 NVITFDMLIRGFIRINEP-SKVIELLHKMKEINVMPDAS 450
           +  T+ ++ RG      P  + ++ + +M E   +P+ S
Sbjct: 523 DAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFS 561



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 187/383 (48%), Gaps = 50/383 (13%)

Query: 21  PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLV--------------- 65
           PD  TF  LIK LC   +I  A  +  ++  +G  PD  T+TTL+               
Sbjct: 191 PDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRV 250

Query: 66  --------------------NGLCRTSHTIVALNLFEEMANGNGEFGVV----------C 95
                               +G C+      AL+  +EM+N       +          C
Sbjct: 251 KEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGC 310

Query: 96  EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
           +P+  TY  +ID LC  G + +A  LL +M+      NV+TY ++I GFC  K   EA+ 
Sbjct: 311 QPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEE 370

Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
           +F +M  QG+  N VT+N ++D LCK+ ++ EA++L+D MI  G++PD FTYN++L  FC
Sbjct: 371 IFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFC 430

Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
             G +  A ++  +M S GC+  + +Y  LI G CK   +E A  L   +  KG+     
Sbjct: 431 REGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPH 490

Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKN-GYIVEAVELFHT 334
            +N +   LF+  + + A +LF EM+  G   D +TY+    GL  + G I EAV+    
Sbjct: 491 AYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDF--V 548

Query: 335 LRILKCEF--DIRAYNSLIDGLC 355
           + +++  F  +  ++  L +GLC
Sbjct: 549 IEMIEKGFLPEFSSFYMLAEGLC 571



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 18/382 (4%)

Query: 90  EFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKD 149
           EFG+    +T+ Y  +++ L     +   + +   M  K IKP+V T+  +I+  C A  
Sbjct: 151 EFGLAL--DTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQ 208

Query: 150 WNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNT 209
              A  +  EM   G+ P+  TF  +M    + G MD A R+ + M+  G      T N 
Sbjct: 209 IRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNV 268

Query: 210 LLDGFCLTGRVNHAK----------------ELFVSMESMGCKHTVFSYSILINGYCKNK 253
           L+ GFC  GR+  A                 EL+  M++ GC+   F+Y++LI+  C   
Sbjct: 269 LVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRG 328

Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
           +++ AL L  EM   G   +V+ +NTL  G  +  ++E A ++FD+M+  G++ ++ TY 
Sbjct: 329 KLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYN 388

Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
           T IDGLCK+  + EA +L   + +   + D   YNS++   C+ G ++ A ++ +++   
Sbjct: 389 TLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSN 448

Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
              P++VTY  +IGGLC  G+++ A  L   ++   +V     ++ +I+   +     + 
Sbjct: 449 GCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEA 508

Query: 434 IELLHKMKEINVMPDASIVSIV 455
           + L  +M+E    PDA    IV
Sbjct: 509 MRLFREMEEKGNTPDAFTYKIV 530



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 171/335 (51%), Gaps = 16/335 (4%)

Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
           M+ +G++P+V TFN+++  LCK  ++  A  +++ M  +G+ PD  T+ TL+ GF   G 
Sbjct: 184 MVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGN 243

Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS----------------LYS 263
           ++ A  +   M   GC  T  + ++L++G+CK   IE ALS                LY+
Sbjct: 244 MDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYN 303

Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
           EM +KG +PD   +N L   L    +++ A  L  EM+ +G A +  TY T IDG CKN 
Sbjct: 304 EMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNK 363

Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
            I EA E+F  + I     +   YN+LIDGLCKS R++ A +L   +    L P+  TY+
Sbjct: 364 KIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYN 423

Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
            M+   C +G + KA D+   M  N   P+++T+  LI G  +         LL  ++  
Sbjct: 424 SMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLK 483

Query: 444 NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
            ++      + V+  L K + +  ++  F   E++
Sbjct: 484 GMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEK 518



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 136/284 (47%), Gaps = 8/284 (2%)

Query: 16  KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
           K C  PD  T+  LI  LC   ++ EA  L  ++ + GC  +V TY TL++G C+     
Sbjct: 308 KGC-QPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIE 366

Query: 76  VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
            A  +F++M             N+VTY T+IDGLCK   V +A +L+ QM  + +KP+  
Sbjct: 367 EAEEIFDQMEIQG------LSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKF 420

Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
           TY S++  FC   D  +A  +   M   G +P++VT+  ++  LCK G+++ ASRLL  +
Sbjct: 421 TYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSI 480

Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN-KE 254
              G+      YN ++       R   A  LF  ME  G     F+Y I+  G   +   
Sbjct: 481 QLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGP 540

Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
           I  A+    EM+ KG  P+      L  GL  +   +   KL D
Sbjct: 541 IGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVD 584



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 17/340 (5%)

Query: 126 KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
           K  N +PN   Y  ++R       +N  K +  EM     Q +     + +D   K    
Sbjct: 79  KQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELY 138

Query: 186 DEASRLLDLM-IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
           +E   ++++M ++ G+  D   YN LL+      ++   + +  +M S G K  V +++I
Sbjct: 139 EEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNI 198

Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
           LI   CK  +I  A+ +  EM S G+ PD     TL  G  E   ++ AF++ ++M   G
Sbjct: 199 LIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAG 258

Query: 305 VAADTWTYRTFIDGLCKNGYIVE----------------AVELFHTLRILKCEFDIRAYN 348
                 T    + G CK G I E                A+EL++ ++   C+ D   YN
Sbjct: 259 CPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYN 318

Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
            LID LC  G+L+ AL L R +       NV+TY+ +I G C + ++++A ++F  ME  
Sbjct: 319 MLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQ 378

Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
            +  N +T++ LI G  +     +  +L+ +M    + PD
Sbjct: 379 GLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPD 418



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 7/250 (2%)

Query: 2   GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
           G++     +L  +  S    + +T+ +LI G C   +I EA  +F ++ + G   +  TY
Sbjct: 328 GKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTY 387

Query: 62  TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
            TL++GLC++     A  L ++M           +P+  TY +++   C+EG + KA ++
Sbjct: 388 NTLIDGLCKSRRVQEAAQLMDQMIMEG------LKPDKFTYNSMLTYFCREGDIQKAADI 441

Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
           +  M     +P++VTY ++I G C A     A RL   +  +G+      +N ++  L K
Sbjct: 442 VQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFK 501

Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT-GRVNHAKELFVSMESMGCKHTVF 240
             +  EA RL   M + G  PDAFTY  +  G   + G +  A +  + M   G      
Sbjct: 502 RKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFS 561

Query: 241 SYSILINGYC 250
           S+ +L  G C
Sbjct: 562 SFYMLAEGLC 571



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 7/198 (3%)

Query: 3   RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
           RV     ++ +++     PD  T+ S++   C E  I +AA +   +   GCEPD+ TY 
Sbjct: 399 RVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYG 458

Query: 63  TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
           TL+ GLC+     VA  L   +       G+V  P+   Y  +I  L K     +A  L 
Sbjct: 459 TLIGGLCKAGRVEVASRLLRSIQLK----GMVLTPH--AYNPVIQALFKRKRTKEAMRLF 512

Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYA-KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
            +M++K   P+  TY  V RG   +     EA    IEM+++G  P   +F ++ + LC 
Sbjct: 513 REMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCS 572

Query: 182 NGKMDEASRLLDLMIQHG 199
               D   +L+DL+++  
Sbjct: 573 LSMEDTLIKLVDLVMEKA 590


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.139    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,169,288,142
Number of Sequences: 23463169
Number of extensions: 287093147
Number of successful extensions: 940952
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8534
Number of HSP's successfully gapped in prelim test: 4466
Number of HSP's that attempted gapping in prelim test: 626435
Number of HSP's gapped (non-prelim): 92397
length of query: 487
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 340
effective length of database: 8,910,109,524
effective search space: 3029437238160
effective search space used: 3029437238160
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)